Query 000438
Match_columns 1510
No_of_seqs 690 out of 5726
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 08:43:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000438.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000438hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 6E-283 1E-287 2694.9 145.3 1249 253-1508 122-1380(1381)
2 PLN03130 ABC transporter C fam 100.0 9E-220 2E-224 2230.8 171.9 1437 35-1506 26-1477(1622)
3 PLN03232 ABC transporter C fam 100.0 9E-215 2E-219 2185.2 172.2 1429 37-1506 28-1474(1495)
4 TIGR00957 MRP_assoc_pro multi 100.0 2E-213 4E-218 2174.8 174.2 1428 36-1504 21-1521(1522)
5 TIGR01271 CFTR_protein cystic 100.0 1E-201 2E-206 2051.8 154.4 1244 253-1505 3-1454(1490)
6 PTZ00243 ABC transporter; Prov 100.0 1E-192 2E-197 1961.9 152.6 1253 251-1506 57-1549(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 2E-144 5E-149 1368.0 113.5 1091 384-1503 90-1225(1228)
8 PTZ00265 multidrug resistance 100.0 3E-133 7E-138 1363.2 141.9 1178 319-1503 51-1465(1466)
9 KOG0058 Peptide exporter, ABC 100.0 7E-90 1.5E-94 830.3 60.5 565 935-1505 135-706 (716)
10 COG2274 SunT ABC-type bacterio 100.0 4E-83 8.8E-88 807.0 67.1 563 935-1503 142-708 (709)
11 COG1132 MdlB ABC-type multidru 100.0 1.6E-79 3.5E-84 782.2 67.8 546 953-1504 18-565 (567)
12 PRK11174 cysteine/glutathione 100.0 1.7E-77 3.8E-82 767.7 70.0 562 936-1504 11-585 (588)
13 TIGR00958 3a01208 Conjugate Tr 100.0 1.5E-77 3.2E-82 779.2 67.5 554 937-1500 151-711 (711)
14 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.3E-76 2.9E-81 771.0 71.8 544 951-1502 138-684 (686)
15 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.1E-76 4.6E-81 772.5 68.9 561 935-1500 142-709 (710)
16 PRK10790 putative multidrug tr 100.0 8.3E-76 1.8E-80 752.3 72.1 547 952-1505 26-577 (592)
17 TIGR01193 bacteriocin_ABC ABC- 100.0 3.5E-76 7.6E-81 769.6 68.8 559 935-1501 144-707 (708)
18 PRK11176 lipid transporter ATP 100.0 1.5E-74 3.2E-79 740.2 70.3 543 956-1503 32-579 (582)
19 PRK11160 cysteine/glutathione 100.0 2.5E-74 5.4E-79 733.2 70.0 558 938-1502 7-573 (574)
20 TIGR03375 type_I_sec_LssB type 100.0 3E-74 6.5E-79 749.9 69.7 551 935-1492 135-689 (694)
21 KOG0055 Multidrug/pheromone ex 100.0 6.8E-76 1.5E-80 745.2 49.3 514 986-1504 70-589 (1228)
22 TIGR01846 type_I_sec_HlyB type 100.0 2.6E-73 5.6E-78 740.5 70.8 563 934-1503 126-692 (694)
23 TIGR02203 MsbA_lipidA lipid A 100.0 3.1E-73 6.7E-78 727.1 70.2 548 951-1503 16-568 (571)
24 COG4988 CydD ABC-type transpor 100.0 7.6E-73 1.7E-77 672.5 63.1 512 987-1505 40-557 (559)
25 COG4987 CydC ABC-type transpor 100.0 9.7E-73 2.1E-77 658.7 58.8 500 996-1501 67-571 (573)
26 PRK13657 cyclic beta-1,2-gluca 100.0 2.3E-71 4.9E-76 710.3 72.0 549 951-1504 21-571 (588)
27 KOG0056 Heavy metal exporter H 100.0 3E-74 6.6E-79 651.8 37.6 530 965-1503 231-774 (790)
28 TIGR02204 MsbA_rel ABC transpo 100.0 2.9E-71 6.4E-76 709.3 70.1 562 937-1502 8-574 (576)
29 TIGR02868 CydC thiol reductant 100.0 1.1E-71 2.3E-76 705.5 64.3 508 953-1463 17-529 (529)
30 TIGR01192 chvA glucan exporter 100.0 2.7E-70 5.8E-75 697.2 71.3 561 938-1506 10-573 (585)
31 PRK10789 putative multidrug tr 100.0 1.3E-70 2.8E-75 699.1 66.4 511 989-1504 38-551 (569)
32 KOG0057 Mitochondrial Fe/S clu 100.0 2E-70 4.2E-75 639.4 56.0 502 987-1503 74-586 (591)
33 TIGR02857 CydD thiol reductant 100.0 1.7E-69 3.6E-74 685.5 65.0 517 954-1475 8-529 (529)
34 PRK11174 cysteine/glutathione 100.0 1.3E-68 2.9E-73 685.7 73.1 544 319-869 13-584 (588)
35 COG5265 ATM1 ABC-type transpor 100.0 3.3E-70 7.1E-75 617.5 39.6 490 1008-1501 3-496 (497)
36 COG1123 ATPase components of v 100.0 2.1E-69 4.6E-74 647.1 45.2 467 643-1502 4-531 (539)
37 TIGR01842 type_I_sec_PrtD type 100.0 3.8E-67 8.3E-72 664.9 67.2 528 953-1492 10-543 (544)
38 PTZ00265 multidrug resistance 100.0 1.8E-67 3.9E-72 718.7 67.1 512 988-1503 98-728 (1466)
39 KOG0058 Peptide exporter, ABC 100.0 3.5E-66 7.6E-71 624.9 66.0 546 321-870 140-705 (716)
40 PRK10261 glutathione transport 100.0 5.4E-68 1.2E-72 678.6 48.3 490 643-1501 11-565 (623)
41 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 5.3E-65 1.1E-69 665.3 73.0 541 320-866 146-709 (710)
42 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.3E-64 2.8E-69 658.7 74.2 542 317-867 125-683 (686)
43 COG2274 SunT ABC-type bacterio 100.0 1.9E-64 4.1E-69 637.5 72.1 548 317-868 143-707 (709)
44 PRK15134 microcin C ABC transp 100.0 3E-67 6.5E-72 663.2 46.1 451 644-1493 5-517 (529)
45 TIGR00958 3a01208 Conjugate Tr 100.0 2.3E-64 5.1E-69 655.6 72.7 538 323-865 156-710 (711)
46 TIGR03375 type_I_sec_LssB type 100.0 6.1E-64 1.3E-68 653.1 72.8 535 318-858 137-689 (694)
47 TIGR00956 3a01205 Pleiotropic 100.0 3E-65 6.4E-70 696.9 62.7 249 1226-1488 717-990 (1394)
48 TIGR01194 cyc_pep_trnsptr cycl 100.0 2.2E-64 4.8E-69 639.6 65.5 516 955-1483 24-551 (555)
49 PRK13549 xylose transporter AT 100.0 3E-66 6.4E-71 650.7 44.2 447 644-1490 5-493 (506)
50 PRK09700 D-allose transporter 100.0 6.4E-66 1.4E-70 648.8 45.1 445 644-1488 5-495 (510)
51 TIGR03269 met_CoM_red_A2 methy 100.0 7.8E-66 1.7E-70 649.5 45.3 445 645-1491 1-517 (520)
52 TIGR01193 bacteriocin_ABC ABC- 100.0 5.9E-63 1.3E-67 645.3 73.5 537 321-866 149-706 (708)
53 PRK11176 lipid transporter ATP 100.0 1.5E-62 3.3E-67 629.4 73.5 544 320-868 17-578 (582)
54 TIGR02203 MsbA_lipidA lipid A 100.0 1.6E-62 3.5E-67 628.4 73.4 543 320-867 6-566 (571)
55 TIGR01257 rim_protein retinal- 100.0 6.3E-63 1.4E-67 668.4 72.3 215 1266-1492 1936-2160(2272)
56 PRK15439 autoinducer 2 ABC tra 100.0 3.3E-65 7E-70 640.9 44.5 451 643-1492 10-493 (510)
57 PRK10762 D-ribose transporter 100.0 3.4E-65 7.3E-70 640.4 43.7 440 644-1490 4-483 (501)
58 PRK15064 ABC transporter ATP-b 100.0 2.6E-64 5.5E-69 636.7 50.3 484 645-1494 2-528 (530)
59 TIGR02633 xylG D-xylose ABC tr 100.0 6.4E-65 1.4E-69 638.6 43.9 446 645-1489 2-490 (500)
60 TIGR02204 MsbA_rel ABC transpo 100.0 1.3E-61 2.8E-66 620.3 73.4 547 319-867 9-573 (576)
61 PRK10790 putative multidrug tr 100.0 2E-61 4.4E-66 619.5 74.8 539 322-869 17-575 (592)
62 PRK11288 araG L-arabinose tran 100.0 2.1E-64 4.6E-69 633.2 44.5 442 644-1490 4-484 (501)
63 PRK10982 galactose/methyl gala 100.0 5.4E-64 1.2E-68 628.5 44.2 439 648-1490 2-479 (491)
64 PRK10789 putative multidrug tr 100.0 6.8E-61 1.5E-65 610.0 70.9 528 338-869 5-550 (569)
65 COG4172 ABC-type uncharacteriz 100.0 1.4E-63 2.9E-68 558.8 40.4 457 643-1498 5-524 (534)
66 PRK10938 putative molybdenum t 100.0 7.9E-64 1.7E-68 627.2 43.2 440 644-1485 3-486 (490)
67 PRK11160 cysteine/glutathione 100.0 1.1E-60 2.4E-65 608.2 72.3 539 322-867 10-572 (574)
68 TIGR01846 type_I_sec_HlyB type 100.0 1.6E-60 3.4E-65 620.6 75.3 546 318-868 129-691 (694)
69 PLN03232 ABC transporter C fam 100.0 1.8E-61 4E-66 666.6 69.0 474 1012-1504 366-841 (1495)
70 PRK13657 cyclic beta-1,2-gluca 100.0 2.6E-60 5.5E-65 608.4 74.3 538 322-869 13-570 (588)
71 TIGR02868 CydC thiol reductant 100.0 8.4E-61 1.8E-65 606.1 68.2 504 322-829 7-529 (529)
72 PLN03130 ABC transporter C fam 100.0 2.1E-61 4.6E-66 665.1 67.1 473 1012-1504 366-841 (1622)
73 TIGR01842 type_I_sec_PrtD type 100.0 1.9E-60 4.2E-65 603.7 69.6 522 325-857 3-542 (544)
74 PRK10522 multidrug transporter 100.0 8.8E-61 1.9E-65 606.7 65.6 472 996-1488 57-536 (547)
75 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 3.6E-62 7.8E-67 619.1 52.4 480 644-1492 4-532 (552)
76 PRK11819 putative ABC transpor 100.0 5E-62 1.1E-66 617.7 53.0 482 643-1493 5-535 (556)
77 COG1132 MdlB ABC-type multidru 100.0 3E-59 6.5E-64 596.1 72.0 534 326-869 13-564 (567)
78 TIGR01192 chvA glucan exporter 100.0 8.5E-59 1.8E-63 591.6 74.7 538 322-868 13-569 (585)
79 COG4988 CydD ABC-type transpor 100.0 4.1E-59 8.9E-64 555.2 66.5 528 333-870 5-556 (559)
80 TIGR02857 CydD thiol reductant 100.0 5.8E-59 1.3E-63 589.4 67.8 511 326-841 1-529 (529)
81 PRK10636 putative ABC transpor 100.0 9.2E-61 2E-65 612.2 51.3 199 1267-1491 312-517 (638)
82 PRK11147 ABC transporter ATPas 100.0 2.8E-59 6E-64 600.3 53.0 200 1267-1491 319-528 (635)
83 PLN03140 ABC transporter G fam 100.0 1.5E-58 3.3E-63 627.6 59.5 211 1267-1487 867-1106(1470)
84 TIGR00957 MRP_assoc_pro multi 100.0 1.8E-56 3.9E-61 618.0 72.6 472 393-868 1029-1519(1522)
85 COG4618 ArpD ABC-type protease 100.0 8.7E-58 1.9E-62 527.8 49.2 524 955-1492 29-561 (580)
86 PLN03073 ABC transporter F fam 100.0 7.6E-58 1.6E-62 585.7 51.4 198 1266-1489 507-712 (718)
87 COG0488 Uup ATPase components 100.0 1.6E-57 3.5E-62 557.8 45.9 484 644-1493 3-527 (530)
88 KOG0057 Mitochondrial Fe/S clu 100.0 2.1E-55 4.6E-60 513.5 59.2 518 341-868 43-585 (591)
89 COG4987 CydC ABC-type transpor 100.0 1.3E-54 2.7E-59 507.0 62.0 475 377-866 73-570 (573)
90 PRK13409 putative ATPase RIL; 100.0 2.2E-57 4.8E-62 572.3 39.7 192 1267-1486 340-537 (590)
91 TIGR00954 3a01203 Peroxysomal 100.0 2.5E-55 5.4E-60 564.0 58.4 511 950-1477 97-653 (659)
92 PTZ00243 ABC transporter; Prov 100.0 3.7E-54 7.9E-59 593.0 71.3 466 402-869 1031-1546(1560)
93 KOG0056 Heavy metal exporter H 100.0 7.7E-56 1.7E-60 502.4 42.2 526 336-870 223-775 (790)
94 COG1129 MglA ABC-type sugar tr 100.0 4.1E-56 8.8E-61 529.9 42.0 442 643-1483 7-482 (500)
95 TIGR01194 cyc_pep_trnsptr cycl 100.0 1E-53 2.2E-58 542.2 64.5 507 322-849 11-551 (555)
96 KOG0054 Multidrug resistance-a 100.0 4.1E-53 9E-58 551.2 63.4 487 998-1503 253-743 (1381)
97 TIGR01271 CFTR_protein cystic 100.0 4.6E-52 1E-56 572.3 71.6 473 393-870 949-1453(1490)
98 COG4618 ArpD ABC-type protease 100.0 1.4E-52 3E-57 484.7 55.4 527 317-857 12-560 (580)
99 PRK10522 multidrug transporter 100.0 7.1E-52 1.5E-56 525.4 63.8 499 318-849 3-530 (547)
100 COG3845 ABC-type uncharacteriz 100.0 6.3E-54 1.4E-58 498.7 36.0 450 643-1488 3-489 (501)
101 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.5E-54 3.3E-59 498.8 28.2 238 1266-1504 1-238 (275)
102 TIGR00954 3a01203 Peroxysomal 100.0 8.9E-49 1.9E-53 503.5 59.9 504 329-843 97-653 (659)
103 PRK14257 phosphate ABC transpo 100.0 5E-50 1.1E-54 472.9 26.4 256 1231-1493 35-315 (329)
104 COG5265 ATM1 ABC-type transpor 100.0 2.2E-47 4.7E-52 432.5 40.2 459 403-866 16-495 (497)
105 KOG0927 Predicted transporter 100.0 8.8E-46 1.9E-50 430.7 24.7 193 1267-1483 389-587 (614)
106 COG1135 AbcC ABC-type metal io 100.0 1.6E-45 3.4E-50 406.1 22.9 225 1268-1503 2-245 (339)
107 COG1126 GlnQ ABC-type polar am 100.0 2.3E-45 4.9E-50 386.2 21.9 214 1267-1493 2-227 (240)
108 cd03288 ABCC_SUR2 The SUR doma 100.0 1.7E-44 3.7E-49 414.6 29.5 239 1264-1502 16-255 (257)
109 cd03252 ABCC_Hemolysin The ABC 100.0 8.3E-44 1.8E-48 404.6 27.6 234 1268-1501 1-235 (237)
110 PRK14257 phosphate ABC transpo 100.0 2.6E-44 5.6E-49 424.4 23.8 264 577-858 22-314 (329)
111 cd03244 ABCC_MRP_domain2 Domai 100.0 2.5E-43 5.4E-48 396.4 26.8 221 1266-1486 1-221 (221)
112 COG1117 PstB ABC-type phosphat 100.0 1E-43 2.2E-48 371.3 18.8 219 1266-1493 6-239 (253)
113 COG1125 OpuBA ABC-type proline 100.0 3.7E-43 8.1E-48 375.5 20.8 216 1268-1496 2-231 (309)
114 COG1126 GlnQ ABC-type polar am 100.0 2.8E-43 6.1E-48 370.5 18.9 209 644-858 2-226 (240)
115 cd03251 ABCC_MsbA MsbA is an e 100.0 2.4E-42 5.2E-47 391.9 27.0 232 1268-1499 1-233 (234)
116 cd03253 ABCC_ATM1_transporter 100.0 7.1E-42 1.5E-46 388.6 27.9 233 1268-1501 1-234 (236)
117 cd03369 ABCC_NFT1 Domain 2 of 100.0 5.7E-42 1.2E-46 381.4 25.8 207 1262-1486 1-207 (207)
118 cd03254 ABCC_Glucan_exporter_l 100.0 6.8E-42 1.5E-46 386.9 26.3 227 1266-1493 1-228 (229)
119 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.4E-41 3E-46 386.7 27.2 233 1268-1500 1-235 (238)
120 KOG0062 ATPase component of AB 100.0 3.3E-41 7.1E-46 390.7 29.7 194 1264-1483 359-560 (582)
121 TIGR02314 ABC_MetN D-methionin 100.0 1.4E-41 3E-46 401.6 25.8 215 1268-1493 2-232 (343)
122 cd03245 ABCC_bacteriocin_expor 100.0 4.5E-41 9.8E-46 377.9 26.4 219 1266-1484 1-220 (220)
123 PRK13631 cbiO cobalt transport 100.0 3.2E-41 7E-46 397.0 25.5 221 1264-1494 18-268 (320)
124 KOG0065 Pleiotropic drug resis 100.0 2.2E-40 4.7E-45 420.6 34.7 199 1280-1488 802-1018(1391)
125 COG1124 DppF ABC-type dipeptid 100.0 3.2E-41 7E-46 362.8 22.9 224 1267-1501 3-242 (252)
126 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3.2E-41 6.9E-46 372.6 22.3 210 1267-1493 4-229 (254)
127 cd03260 ABC_PstB_phosphate_tra 100.0 3.6E-41 7.8E-46 380.5 23.2 211 1268-1489 1-227 (227)
128 COG1120 FepC ABC-type cobalami 100.0 3.5E-41 7.6E-46 374.5 22.1 214 1267-1493 2-230 (258)
129 cd03261 ABC_Org_Solvent_Resist 100.0 9.2E-41 2E-45 379.1 24.3 214 1268-1494 1-229 (235)
130 COG1122 CbiO ABC-type cobalt t 100.0 8.5E-41 1.8E-45 372.3 22.2 215 1267-1493 3-230 (235)
131 PRK14269 phosphate ABC transpo 100.0 1.6E-40 3.4E-45 379.6 24.6 218 1267-1493 2-232 (246)
132 COG3839 MalK ABC-type sugar tr 100.0 1.2E-40 2.7E-45 383.7 23.4 215 1267-1496 3-229 (338)
133 COG1127 Ttg2A ABC-type transpo 100.0 2.3E-40 5E-45 353.8 22.5 222 1266-1500 7-245 (263)
134 PRK14250 phosphate ABC transpo 100.0 5.8E-40 1.3E-44 373.7 26.9 219 1267-1498 3-229 (241)
135 PRK13650 cbiO cobalt transport 100.0 3.2E-40 6.8E-45 383.3 25.0 216 1267-1493 4-231 (279)
136 cd03248 ABCC_TAP TAP, the Tran 100.0 3.6E-40 7.7E-45 372.1 24.1 217 1264-1480 8-226 (226)
137 COG2884 FtsE Predicted ATPase 100.0 2.5E-40 5.3E-45 340.1 19.3 207 1268-1486 2-221 (223)
138 PRK13637 cbiO cobalt transport 100.0 4.9E-40 1.1E-44 383.1 24.5 215 1267-1492 2-235 (287)
139 PRK13635 cbiO cobalt transport 100.0 5.5E-40 1.2E-44 381.1 24.9 216 1267-1493 5-231 (279)
140 PRK13647 cbiO cobalt transport 100.0 5.1E-40 1.1E-44 380.6 24.2 212 1267-1490 4-226 (274)
141 PRK11650 ugpC glycerol-3-phosp 100.0 8.5E-40 1.8E-44 389.7 26.3 216 1267-1496 3-230 (356)
142 PRK10744 pstB phosphate transp 100.0 9.7E-40 2.1E-44 376.1 26.0 220 1265-1493 11-246 (260)
143 PRK11153 metN DL-methionine tr 100.0 7.3E-40 1.6E-44 389.9 25.7 215 1268-1493 2-232 (343)
144 cd03263 ABC_subfamily_A The AB 100.0 4.8E-40 1E-44 369.6 22.6 210 1268-1489 1-219 (220)
145 COG1136 SalX ABC-type antimicr 100.0 9.9E-40 2.2E-44 356.1 24.3 204 1268-1482 2-222 (226)
146 cd03250 ABCC_MRP_domain1 Domai 100.0 8.4E-40 1.8E-44 363.1 24.1 199 1268-1479 1-204 (204)
147 COG3638 ABC-type phosphate/pho 100.0 4.1E-40 8.9E-45 351.0 20.6 213 1267-1491 3-237 (258)
148 PRK14242 phosphate transporter 100.0 1E-39 2.2E-44 374.8 25.6 218 1267-1493 6-239 (253)
149 cd03296 ABC_CysA_sulfate_impor 100.0 9.6E-40 2.1E-44 371.6 24.9 212 1267-1493 2-228 (239)
150 COG1125 OpuBA ABC-type proline 100.0 1.4E-40 3E-45 355.9 16.6 207 645-859 2-227 (309)
151 cd03291 ABCC_CFTR1 The CFTR su 100.0 3.9E-39 8.5E-44 372.4 29.7 217 1265-1498 37-254 (282)
152 cd03256 ABC_PhnC_transporter A 100.0 7.2E-40 1.6E-44 373.4 23.1 212 1268-1491 1-234 (241)
153 COG1135 AbcC ABC-type metal io 100.0 2.7E-40 5.9E-45 364.7 18.7 206 645-858 2-232 (339)
154 PRK11432 fbpC ferric transport 100.0 1.2E-39 2.6E-44 387.2 25.7 216 1266-1496 5-232 (351)
155 PRK14273 phosphate ABC transpo 100.0 1.3E-39 2.8E-44 374.1 25.0 218 1267-1493 7-240 (254)
156 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 5.6E-40 1.2E-44 362.8 21.0 210 643-858 3-228 (254)
157 PRK14259 phosphate ABC transpo 100.0 1.7E-39 3.7E-44 375.4 26.1 222 1263-1493 9-255 (269)
158 cd03289 ABCC_CFTR2 The CFTR su 100.0 1.4E-39 3.1E-44 374.7 25.1 224 644-870 2-238 (275)
159 TIGR00960 3a0501s02 Type II (G 100.0 6.5E-40 1.4E-44 367.4 21.6 202 1268-1480 2-216 (216)
160 cd03219 ABC_Mj1267_LivG_branch 100.0 9.2E-40 2E-44 371.3 22.9 213 1268-1493 1-234 (236)
161 PRK13636 cbiO cobalt transport 100.0 1.4E-39 3E-44 378.8 24.8 215 1267-1493 5-233 (283)
162 PRK13646 cbiO cobalt transport 100.0 1.2E-39 2.7E-44 379.7 24.3 216 1267-1493 2-237 (286)
163 TIGR00972 3a0107s01c2 phosphat 100.0 2.2E-39 4.7E-44 370.6 25.4 217 1268-1493 2-234 (247)
164 cd03258 ABC_MetN_methionine_tr 100.0 1.3E-39 2.9E-44 369.2 23.3 214 1268-1492 2-231 (233)
165 TIGR01186 proV glycine betaine 100.0 9.3E-40 2E-44 388.0 22.6 201 1282-1493 6-221 (363)
166 PRK13643 cbiO cobalt transport 100.0 1.8E-39 3.8E-44 378.6 24.5 214 1268-1492 2-234 (288)
167 COG1116 TauB ABC-type nitrate/ 100.0 8.3E-40 1.8E-44 355.9 20.1 197 644-847 3-212 (248)
168 PRK14235 phosphate transporter 100.0 2.6E-39 5.6E-44 373.7 25.5 221 1264-1493 16-253 (267)
169 TIGR03265 PhnT2 putative 2-ami 100.0 1.8E-39 3.8E-44 386.5 24.6 215 1267-1496 4-230 (353)
170 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.2E-39 4.8E-44 369.4 24.3 214 1268-1493 1-227 (242)
171 PRK14267 phosphate ABC transpo 100.0 2.2E-39 4.8E-44 372.0 24.3 218 1267-1493 4-239 (253)
172 TIGR02315 ABC_phnC phosphonate 100.0 2E-39 4.3E-44 370.2 23.5 211 1268-1490 2-234 (243)
173 PRK13632 cbiO cobalt transport 100.0 3.7E-39 8E-44 373.3 26.1 216 1267-1493 7-233 (271)
174 PRK14247 phosphate ABC transpo 100.0 3.3E-39 7.2E-44 369.8 25.3 218 1267-1493 3-236 (250)
175 PRK13652 cbiO cobalt transport 100.0 3.1E-39 6.7E-44 374.9 25.3 216 1267-1494 3-230 (277)
176 PRK10851 sulfate/thiosulfate t 100.0 3.6E-39 7.7E-44 383.9 26.2 212 1267-1493 2-228 (353)
177 cd03259 ABC_Carb_Solutes_like 100.0 1.6E-39 3.4E-44 363.4 21.8 202 1268-1484 1-213 (213)
178 cd03224 ABC_TM1139_LivF_branch 100.0 2.6E-39 5.5E-44 364.2 23.6 212 1268-1491 1-221 (222)
179 PRK13642 cbiO cobalt transport 100.0 4.8E-39 1E-43 373.3 26.0 217 1267-1494 4-232 (277)
180 PRK14245 phosphate ABC transpo 100.0 2.9E-39 6.3E-44 370.2 23.6 218 1267-1493 3-236 (250)
181 cd03247 ABCC_cytochrome_bd The 100.0 2.4E-39 5.2E-44 351.4 21.7 178 1268-1484 1-178 (178)
182 PRK14237 phosphate transporter 100.0 5.1E-39 1.1E-43 371.2 25.8 219 1266-1493 19-253 (267)
183 PRK14239 phosphate transporter 100.0 5.3E-39 1.2E-43 368.6 25.7 218 1267-1493 5-238 (252)
184 PRK11629 lolD lipoprotein tran 100.0 3.5E-39 7.5E-44 365.6 23.7 208 1267-1485 5-228 (233)
185 COG1116 TauB ABC-type nitrate/ 100.0 3.8E-39 8.1E-44 350.8 22.8 220 1267-1504 3-238 (248)
186 COG4178 ABC-type uncharacteriz 100.0 2.4E-36 5.2E-41 367.1 49.8 467 988-1477 87-588 (604)
187 PRK14244 phosphate ABC transpo 100.0 2.3E-39 5E-44 371.3 22.2 217 1268-1493 6-239 (251)
188 PRK13640 cbiO cobalt transport 100.0 6.1E-39 1.3E-43 373.2 26.1 216 1266-1492 4-233 (282)
189 COG1120 FepC ABC-type cobalami 100.0 9.9E-40 2.1E-44 362.9 18.5 201 644-858 2-229 (258)
190 PRK13634 cbiO cobalt transport 100.0 4.1E-39 8.9E-44 375.9 24.5 217 1267-1493 2-237 (290)
191 PRK09536 btuD corrinoid ABC tr 100.0 4.1E-39 8.9E-44 386.9 25.0 214 1267-1493 3-230 (402)
192 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.7E-39 5.8E-44 373.8 22.5 212 1269-1493 26-252 (269)
193 PRK13651 cobalt transporter AT 100.0 5E-39 1.1E-43 376.3 25.0 216 1267-1493 2-256 (305)
194 PRK13537 nodulation ABC transp 100.0 3.1E-39 6.8E-44 378.9 23.3 213 1266-1492 6-228 (306)
195 TIGR03258 PhnT 2-aminoethylpho 100.0 3.8E-39 8.2E-44 384.1 24.4 217 1265-1496 3-234 (362)
196 PRK15079 oligopeptide ABC tran 100.0 6.8E-39 1.5E-43 378.7 26.3 221 1267-1498 8-259 (331)
197 PRK14256 phosphate ABC transpo 100.0 8.3E-39 1.8E-43 366.9 26.1 220 1265-1493 2-238 (252)
198 PRK14251 phosphate ABC transpo 100.0 3.8E-39 8.2E-44 369.6 23.1 218 1267-1493 4-237 (251)
199 PRK14262 phosphate ABC transpo 100.0 6.5E-39 1.4E-43 367.4 25.0 218 1267-1493 3-236 (250)
200 PRK11308 dppF dipeptide transp 100.0 8.8E-39 1.9E-43 377.5 26.8 222 1267-1498 5-252 (327)
201 cd03266 ABC_NatA_sodium_export 100.0 3.5E-39 7.6E-44 362.0 22.2 205 1268-1484 2-218 (218)
202 cd03226 ABC_cobalt_CbiO_domain 100.0 3.6E-39 7.8E-44 358.3 22.0 198 1269-1481 1-205 (205)
203 cd03265 ABC_DrrA DrrA is the A 100.0 5.3E-39 1.1E-43 361.0 23.6 208 1268-1489 1-219 (220)
204 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4.5E-39 9.8E-44 365.4 23.2 211 1268-1492 2-222 (236)
205 PRK13633 cobalt transporter AT 100.0 7.3E-39 1.6E-43 372.3 25.4 216 1267-1493 4-235 (280)
206 PRK13648 cbiO cobalt transport 100.0 5.3E-39 1.2E-43 371.7 24.1 217 1267-1494 7-234 (269)
207 PRK14274 phosphate ABC transpo 100.0 9.4E-39 2E-43 367.8 26.0 218 1267-1493 12-245 (259)
208 PRK14249 phosphate ABC transpo 100.0 1E-38 2.2E-43 366.0 26.1 218 1267-1493 4-237 (251)
209 PRK11000 maltose/maltodextrin 100.0 5.5E-39 1.2E-43 385.4 24.8 212 1267-1493 3-225 (369)
210 PRK13644 cbiO cobalt transport 100.0 7.6E-39 1.6E-43 370.8 25.1 214 1268-1493 2-226 (274)
211 TIGR03005 ectoine_ehuA ectoine 100.0 7.5E-39 1.6E-43 367.2 24.9 213 1268-1493 1-238 (252)
212 TIGR03411 urea_trans_UrtD urea 100.0 5.8E-39 1.3E-43 366.1 23.7 212 1268-1492 3-232 (242)
213 PRK14268 phosphate ABC transpo 100.0 6.4E-39 1.4E-43 368.9 24.3 218 1267-1493 12-244 (258)
214 COG4615 PvdE ABC-type sideroph 100.0 1.6E-36 3.5E-41 339.7 42.5 470 988-1483 49-529 (546)
215 PRK10619 histidine/lysine/argi 100.0 8.2E-39 1.8E-43 367.9 25.0 217 1265-1493 3-243 (257)
216 PRK09493 glnQ glutamine ABC tr 100.0 8.6E-39 1.9E-43 364.1 24.9 213 1268-1493 2-227 (240)
217 PRK14266 phosphate ABC transpo 100.0 7.6E-39 1.6E-43 366.9 24.6 218 1267-1493 3-236 (250)
218 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.5E-39 7.6E-44 362.0 21.2 202 1268-1480 1-218 (218)
219 PRK14260 phosphate ABC transpo 100.0 8.3E-39 1.8E-43 368.2 24.8 219 1266-1493 6-245 (259)
220 PRK09452 potA putrescine/sperm 100.0 9.6E-39 2.1E-43 381.9 26.2 216 1266-1496 13-240 (375)
221 PRK14248 phosphate ABC transpo 100.0 1.1E-38 2.4E-43 369.0 25.9 218 1267-1493 21-254 (268)
222 PRK14240 phosphate transporter 100.0 1.1E-38 2.3E-43 365.7 25.4 219 1266-1493 2-236 (250)
223 cd03268 ABC_BcrA_bacitracin_re 100.0 5.8E-39 1.3E-43 357.6 22.5 202 1268-1484 1-208 (208)
224 cd03264 ABC_drug_resistance_li 100.0 6.2E-39 1.3E-43 358.1 22.6 202 1268-1484 1-211 (211)
225 PRK10575 iron-hydroxamate tran 100.0 7.9E-39 1.7E-43 369.4 24.0 213 1267-1492 11-238 (265)
226 PRK14238 phosphate transporter 100.0 2E-38 4.3E-43 367.0 27.2 219 1266-1493 23-257 (271)
227 PRK11831 putative ABC transpor 100.0 1.7E-38 3.7E-43 367.3 26.6 222 1267-1501 7-244 (269)
228 PRK14236 phosphate transporter 100.0 1.2E-38 2.7E-43 369.1 25.4 220 1265-1493 23-258 (272)
229 cd03290 ABCC_SUR1_N The SUR do 100.0 1.2E-38 2.5E-43 357.7 24.0 210 1269-1479 2-218 (218)
230 PRK14254 phosphate ABC transpo 100.0 2.2E-38 4.7E-43 368.6 27.2 219 1266-1493 38-271 (285)
231 cd03218 ABC_YhbG The ABC trans 100.0 7.3E-39 1.6E-43 362.9 22.6 212 1268-1492 1-223 (232)
232 PRK14243 phosphate transporter 100.0 1.9E-38 4.1E-43 365.9 26.2 218 1267-1493 10-250 (264)
233 TIGR02769 nickel_nikE nickel i 100.0 1.9E-38 4.1E-43 366.3 26.2 221 1268-1498 3-247 (265)
234 TIGR02211 LolD_lipo_ex lipopro 100.0 1.2E-38 2.6E-43 358.4 24.0 203 1268-1481 2-220 (221)
235 PRK14270 phosphate ABC transpo 100.0 1.5E-38 3.2E-43 364.6 25.0 218 1267-1493 4-237 (251)
236 PRK11264 putative amino-acid A 100.0 1.6E-38 3.4E-43 364.3 25.1 221 1267-1500 3-244 (250)
237 PRK14252 phosphate ABC transpo 100.0 1.8E-38 3.8E-43 366.7 25.3 223 1262-1493 11-251 (265)
238 cd03293 ABC_NrtD_SsuB_transpor 100.0 8E-39 1.7E-43 359.6 21.7 203 1268-1486 1-218 (220)
239 PRK11231 fecE iron-dicitrate t 100.0 1.3E-38 2.7E-43 365.9 23.8 212 1268-1492 3-228 (255)
240 COG3840 ThiQ ABC-type thiamine 100.0 8.4E-39 1.8E-43 325.6 19.6 209 1268-1493 2-221 (231)
241 PRK13649 cbiO cobalt transport 100.0 1.5E-38 3.2E-43 370.3 24.6 217 1267-1493 2-236 (280)
242 PRK11124 artP arginine transpo 100.0 1.6E-38 3.5E-43 362.3 24.4 214 1267-1493 2-232 (242)
243 PRK13645 cbiO cobalt transport 100.0 1.5E-38 3.2E-43 371.6 24.6 218 1265-1493 4-242 (289)
244 COG3839 MalK ABC-type sugar tr 100.0 6.1E-39 1.3E-43 369.7 20.9 202 644-859 3-225 (338)
245 cd03301 ABC_MalK_N The N-termi 100.0 8.6E-39 1.9E-43 357.6 21.5 202 1268-1484 1-213 (213)
246 PRK11022 dppD dipeptide transp 100.0 2.4E-38 5.2E-43 374.0 26.2 224 1267-1498 3-251 (326)
247 PRK11614 livF leucine/isoleuci 100.0 1.8E-38 3.8E-43 360.9 24.1 213 1267-1492 5-227 (237)
248 cd03225 ABC_cobalt_CbiO_domain 100.0 7.6E-39 1.7E-43 357.4 20.7 200 1269-1479 1-211 (211)
249 COG3842 PotA ABC-type spermidi 100.0 7.6E-39 1.7E-43 370.8 21.2 216 1266-1496 4-232 (352)
250 cd03292 ABC_FtsE_transporter F 100.0 9.6E-39 2.1E-43 357.5 21.4 201 1268-1480 1-214 (214)
251 COG1118 CysA ABC-type sulfate/ 100.0 3.8E-39 8.3E-44 354.5 17.3 201 644-858 2-228 (345)
252 PRK14265 phosphate ABC transpo 100.0 3.7E-38 8E-43 365.1 26.5 220 1265-1493 18-260 (274)
253 TIGR02673 FtsE cell division A 100.0 9.5E-39 2.1E-43 357.5 20.6 200 1268-1479 2-214 (214)
254 PRK13641 cbiO cobalt transport 100.0 2.7E-38 5.8E-43 368.7 25.2 215 1267-1492 2-235 (287)
255 PRK11607 potG putrescine trans 100.0 2.1E-38 4.5E-43 379.7 24.9 216 1266-1496 18-245 (377)
256 PRK10070 glycine betaine trans 100.0 1.8E-38 3.9E-43 381.1 24.4 200 1283-1493 42-256 (400)
257 cd03300 ABC_PotA_N PotA is an 100.0 1.4E-38 3.1E-43 360.3 22.2 211 1268-1493 1-222 (232)
258 PRK10253 iron-enterobactin tra 100.0 2.1E-38 4.5E-43 365.9 23.9 214 1266-1492 6-234 (265)
259 cd03246 ABCC_Protease_Secretio 100.0 1.7E-38 3.8E-43 343.0 21.7 172 1268-1480 1-173 (173)
260 PRK14271 phosphate ABC transpo 100.0 3.5E-38 7.5E-43 365.5 25.8 218 1267-1493 21-253 (276)
261 PRK14241 phosphate transporter 100.0 2.7E-38 5.9E-43 363.8 24.7 218 1267-1493 4-244 (258)
262 PRK14261 phosphate ABC transpo 100.0 3.4E-38 7.3E-43 362.1 25.3 218 1267-1493 6-239 (253)
263 PRK13548 hmuV hemin importer A 100.0 3.6E-38 7.9E-43 362.3 25.6 213 1267-1492 2-231 (258)
264 PRK14258 phosphate ABC transpo 100.0 3.2E-38 6.9E-43 363.6 25.1 219 1266-1493 6-247 (261)
265 PRK10895 lipopolysaccharide AB 100.0 3.3E-38 7.1E-43 359.6 24.9 213 1267-1492 3-227 (241)
266 COG1136 SalX ABC-type antimicr 100.0 1.3E-38 2.7E-43 347.5 20.5 200 645-847 2-221 (226)
267 TIGR03410 urea_trans_UrtE urea 100.0 2.6E-38 5.6E-43 358.0 23.8 211 1268-1490 1-220 (230)
268 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.7E-38 5.8E-43 353.0 23.4 200 1268-1484 1-211 (211)
269 PRK13639 cbiO cobalt transport 100.0 3.2E-38 7E-43 366.0 24.9 214 1268-1493 2-228 (275)
270 PRK14263 phosphate ABC transpo 100.0 3E-38 6.6E-43 363.2 24.4 218 1267-1493 8-247 (261)
271 TIGR01288 nodI ATP-binding ABC 100.0 1.9E-38 4.2E-43 372.7 23.2 212 1267-1492 4-225 (303)
272 PRK15112 antimicrobial peptide 100.0 2.9E-38 6.2E-43 365.0 24.2 226 1267-1503 4-253 (267)
273 TIGR00968 3a0106s01 sulfate AB 100.0 3.2E-38 6.9E-43 358.5 24.2 211 1268-1493 1-222 (237)
274 COG3842 PotA ABC-type spermidi 100.0 5.7E-39 1.2E-43 371.9 18.2 211 643-859 4-228 (352)
275 PRK14264 phosphate ABC transpo 100.0 4.2E-38 9E-43 369.8 25.8 220 1265-1493 43-291 (305)
276 PRK14253 phosphate ABC transpo 100.0 3.6E-38 7.8E-43 361.1 24.6 218 1267-1493 3-235 (249)
277 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.2E-37 2.6E-42 360.1 28.9 214 641-859 36-249 (282)
278 PRK13638 cbiO cobalt transport 100.0 3E-38 6.5E-43 365.8 23.9 213 1268-1493 2-227 (271)
279 PRK11247 ssuB aliphatic sulfon 100.0 4.5E-38 9.7E-43 360.0 24.8 203 1267-1487 12-219 (257)
280 PRK13536 nodulation factor exp 100.0 2.2E-38 4.7E-43 375.4 22.8 212 1267-1492 41-262 (340)
281 PRK09473 oppD oligopeptide tra 100.0 4.8E-38 1E-42 371.7 25.7 224 1267-1498 12-259 (330)
282 COG1117 PstB ABC-type phosphat 100.0 6.3E-39 1.4E-43 335.5 15.9 205 643-858 6-238 (253)
283 PRK10771 thiQ thiamine transpo 100.0 7.1E-38 1.5E-42 354.7 25.9 209 1268-1493 2-221 (232)
284 TIGR03522 GldA_ABC_ATP gliding 100.0 3.1E-38 6.6E-43 370.5 23.6 211 1268-1492 3-222 (301)
285 PRK10584 putative ABC transpor 100.0 4.4E-38 9.5E-43 355.6 24.1 206 1267-1483 6-227 (228)
286 cd03299 ABC_ModC_like Archeal 100.0 4.2E-38 9.1E-43 357.0 23.7 210 1268-1493 1-221 (235)
287 cd03235 ABC_Metallic_Cations A 100.0 1.9E-38 4.1E-43 354.7 20.4 197 1269-1484 1-213 (213)
288 TIGR03873 F420-0_ABC_ATP propo 100.0 4.4E-38 9.6E-43 361.6 23.7 211 1268-1491 2-226 (256)
289 PRK11300 livG leucine/isoleuci 100.0 5.5E-38 1.2E-42 360.9 24.4 214 1267-1493 5-245 (255)
290 PRK14255 phosphate ABC transpo 100.0 5.8E-38 1.3E-42 360.0 24.6 218 1267-1493 5-238 (252)
291 PRK10908 cell division protein 100.0 7.8E-38 1.7E-42 352.0 24.8 203 1268-1482 2-217 (222)
292 cd03257 ABC_NikE_OppD_transpor 100.0 6.9E-38 1.5E-42 354.0 24.5 206 1268-1484 2-228 (228)
293 PRK15093 antimicrobial peptide 100.0 7.6E-38 1.6E-42 371.0 25.9 221 1267-1498 3-256 (330)
294 COG1127 Ttg2A ABC-type transpo 100.0 3.3E-38 7.1E-43 337.3 20.2 205 642-860 6-238 (263)
295 TIGR03415 ABC_choXWV_ATP choli 100.0 4.7E-38 1E-42 374.8 23.9 201 1282-1493 37-256 (382)
296 PRK14275 phosphate ABC transpo 100.0 7.6E-38 1.6E-42 364.5 25.1 220 1265-1493 37-272 (286)
297 PRK14272 phosphate ABC transpo 100.0 7.9E-38 1.7E-42 359.0 24.6 218 1267-1493 4-238 (252)
298 cd03250 ABCC_MRP_domain1 Domai 100.0 6.7E-38 1.5E-42 347.9 23.1 201 645-845 1-204 (204)
299 COG1131 CcmA ABC-type multidru 100.0 3.4E-38 7.4E-43 366.6 21.6 213 1267-1492 4-227 (293)
300 cd03252 ABCC_Hemolysin The ABC 100.0 1.2E-37 2.6E-42 354.1 25.5 218 645-864 1-232 (237)
301 cd03269 ABC_putative_ATPase Th 100.0 3.4E-38 7.3E-43 352.0 20.6 200 1268-1484 1-210 (210)
302 PRK10418 nikD nickel transport 100.0 1.1E-37 2.4E-42 357.7 25.2 222 1267-1501 4-242 (254)
303 TIGR01277 thiQ thiamine ABC tr 100.0 8.9E-38 1.9E-42 349.2 23.1 201 1268-1485 1-212 (213)
304 COG3638 ABC-type phosphate/pho 100.0 2.4E-38 5.1E-43 337.5 17.2 210 643-856 2-236 (258)
305 TIGR01188 drrA daunorubicin re 100.0 5.3E-38 1.1E-42 368.9 21.9 203 1276-1492 2-214 (302)
306 PRK10247 putative ABC transpor 100.0 8E-38 1.7E-42 352.4 22.3 209 1267-1487 7-223 (225)
307 PRK14246 phosphate ABC transpo 100.0 1.5E-37 3.3E-42 356.6 24.8 218 1267-1493 10-243 (257)
308 cd03262 ABC_HisP_GlnQ_permease 100.0 6.5E-38 1.4E-42 350.5 20.7 200 1268-1480 1-213 (213)
309 PRK11701 phnK phosphonate C-P 100.0 3.1E-37 6.7E-42 355.0 26.5 220 1267-1498 6-249 (258)
310 PRK00349 uvrA excinuclease ABC 100.0 6.2E-37 1.3E-41 397.3 32.0 110 1393-1502 818-939 (943)
311 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.5E-37 5.4E-42 351.7 24.9 213 645-858 1-227 (238)
312 PRK13547 hmuV hemin importer A 100.0 2.5E-37 5.5E-42 356.8 24.8 211 1268-1491 2-244 (272)
313 TIGR01978 sufC FeS assembly AT 100.0 1.3E-37 2.9E-42 355.2 22.3 212 1268-1490 1-233 (243)
314 PRK11144 modC molybdate transp 100.0 2.6E-37 5.7E-42 369.3 25.5 210 1268-1493 2-220 (352)
315 PRK09984 phosphonate/organopho 100.0 3.5E-37 7.5E-42 355.5 25.2 210 1267-1489 4-240 (262)
316 PRK11248 tauB taurine transpor 100.0 3.7E-37 8.1E-42 353.0 23.5 201 1268-1486 2-215 (255)
317 cd03253 ABCC_ATM1_transporter 100.0 8.4E-37 1.8E-41 347.0 25.5 215 645-862 1-229 (236)
318 cd03251 ABCC_MsbA MsbA is an e 100.0 7.1E-37 1.5E-41 347.1 24.7 214 645-860 1-228 (234)
319 cd03254 ABCC_Glucan_exporter_l 100.0 8.3E-37 1.8E-41 345.4 24.9 211 644-857 2-226 (229)
320 COG1122 CbiO ABC-type cobalt t 100.0 3.5E-37 7.6E-42 343.3 21.5 202 644-858 3-229 (235)
321 TIGR03740 galliderm_ABC gallid 100.0 8.3E-37 1.8E-41 343.9 24.7 204 1268-1488 1-210 (223)
322 PRK10419 nikE nickel transport 100.0 8.9E-37 1.9E-41 352.6 25.4 221 1267-1497 3-247 (268)
323 cd03228 ABCC_MRP_Like The MRP 100.0 4.4E-37 9.5E-42 331.4 21.1 171 1268-1479 1-171 (171)
324 cd03288 ABCC_SUR2 The SUR doma 100.0 1.3E-36 2.9E-41 349.3 26.4 215 642-858 17-244 (257)
325 TIGR02982 heterocyst_DevA ABC 100.0 3.3E-37 7.2E-42 346.3 20.9 202 1268-1480 2-219 (220)
326 COG0410 LivF ABC-type branched 100.0 8.1E-37 1.8E-41 326.8 21.5 216 1267-1494 3-229 (237)
327 cd03230 ABC_DR_subfamily_A Thi 100.0 5.9E-37 1.3E-41 331.1 20.8 170 1268-1480 1-173 (173)
328 TIGR02142 modC_ABC molybdenum 100.0 8.2E-37 1.8E-41 365.6 23.9 207 1272-1493 4-223 (354)
329 cd03229 ABC_Class3 This class 100.0 7.5E-37 1.6E-41 331.8 21.4 172 1268-1479 1-178 (178)
330 COG3840 ThiQ ABC-type thiamine 100.0 4.4E-37 9.6E-42 313.1 17.8 198 645-858 2-220 (231)
331 PRK09544 znuC high-affinity zi 100.0 1.4E-36 3.1E-41 346.9 24.2 207 1267-1499 4-216 (251)
332 COG1137 YhbG ABC-type (unclass 100.0 7E-38 1.5E-42 324.0 11.6 215 1266-1493 3-230 (243)
333 cd03217 ABC_FeS_Assembly ABC-t 100.0 1.2E-36 2.7E-41 336.3 22.4 185 1268-1490 1-192 (200)
334 cd03244 ABCC_MRP_domain2 Domai 100.0 2.1E-36 4.6E-41 340.2 24.5 206 644-851 2-220 (221)
335 PRK11650 ugpC glycerol-3-phosp 100.0 1.1E-36 2.3E-41 363.2 23.3 206 644-858 3-225 (356)
336 TIGR02323 CP_lyasePhnK phospho 100.0 2.6E-36 5.5E-41 346.6 25.4 220 1267-1498 3-246 (253)
337 COG4555 NatA ABC-type Na+ tran 100.0 4.6E-37 9.9E-42 318.3 17.1 212 1268-1492 2-223 (245)
338 cd03234 ABCG_White The White s 100.0 1.2E-36 2.5E-41 343.4 22.1 203 1268-1484 4-226 (226)
339 COG1118 CysA ABC-type sulfate/ 100.0 5.8E-37 1.3E-41 337.3 18.9 215 1267-1496 2-233 (345)
340 COG0444 DppD ABC-type dipeptid 100.0 1.3E-36 2.7E-41 341.9 22.1 220 1268-1498 2-251 (316)
341 COG1124 DppF ABC-type dipeptid 100.0 9.6E-37 2.1E-41 328.3 19.9 205 644-858 3-232 (252)
342 PRK15056 manganese/iron transp 100.0 2E-36 4.3E-41 350.6 23.9 208 1267-1491 6-230 (272)
343 cd03233 ABC_PDR_domain1 The pl 100.0 1.4E-36 3E-41 336.3 21.5 190 1267-1484 3-202 (202)
344 TIGR02314 ABC_MetN D-methionin 100.0 1.4E-36 3.1E-41 359.0 22.8 207 645-858 2-231 (343)
345 cd03297 ABC_ModC_molybdenum_tr 100.0 1.8E-36 3.8E-41 339.1 21.4 199 1269-1484 3-214 (214)
346 cd03213 ABCG_EPDR ABCG transpo 100.0 1.5E-36 3.2E-41 333.9 20.3 182 1267-1484 3-194 (194)
347 cd03245 ABCC_bacteriocin_expor 100.0 4.8E-36 1E-40 337.1 24.5 205 644-850 2-220 (220)
348 cd03215 ABC_Carb_Monos_II This 100.0 1.5E-36 3.3E-41 330.6 19.5 172 1267-1480 4-182 (182)
349 TIGR01186 proV glycine betaine 100.0 1E-36 2.2E-41 362.0 19.4 192 659-858 5-220 (363)
350 PRK13631 cbiO cobalt transport 100.0 4E-36 8.7E-41 353.9 24.2 211 642-858 19-266 (320)
351 cd03261 ABC_Org_Solvent_Resist 100.0 2.3E-36 4.9E-41 343.2 21.2 204 645-858 1-227 (235)
352 PRK11432 fbpC ferric transport 100.0 2.9E-36 6.4E-41 358.3 22.7 205 643-858 5-227 (351)
353 COG2884 FtsE Predicted ATPase 100.0 1.5E-36 3.3E-41 312.2 17.3 192 645-849 2-218 (223)
354 cd03214 ABC_Iron-Siderophores_ 100.0 2.9E-36 6.3E-41 327.8 20.3 177 1269-1484 1-180 (180)
355 PRK03695 vitamin B12-transport 100.0 5.4E-36 1.2E-40 342.3 22.9 206 1269-1492 2-223 (248)
356 PRK13637 cbiO cobalt transport 100.0 5.8E-36 1.3E-40 348.9 23.6 209 644-857 2-234 (287)
357 cd03232 ABC_PDR_domain2 The pl 100.0 2.6E-36 5.6E-41 331.6 19.4 181 1267-1484 3-192 (192)
358 CHL00131 ycf16 sulfate ABC tra 100.0 6.6E-36 1.4E-40 343.1 23.6 211 1267-1489 7-239 (252)
359 cd03223 ABCD_peroxisomal_ALDP 100.0 4.4E-36 9.4E-41 321.7 20.6 163 1268-1478 1-163 (166)
360 TIGR03608 L_ocin_972_ABC putat 100.0 2.6E-36 5.5E-41 335.8 19.0 193 1270-1475 1-206 (206)
361 PRK13643 cbiO cobalt transport 100.0 4.4E-36 9.6E-41 350.0 21.9 210 645-857 2-233 (288)
362 PRK13634 cbiO cobalt transport 100.0 4.6E-36 1E-40 350.2 22.0 204 645-858 3-236 (290)
363 TIGR02770 nickel_nikD nickel i 100.0 5.7E-36 1.2E-40 338.6 21.8 205 1284-1498 1-223 (230)
364 PRK13650 cbiO cobalt transport 100.0 7.8E-36 1.7E-40 346.6 23.3 204 644-858 4-230 (279)
365 TIGR03265 PhnT2 putative 2-ami 100.0 4.4E-36 9.5E-41 357.5 21.6 205 644-858 4-225 (353)
366 COG1245 Predicted ATPase, RNas 100.0 4.3E-35 9.3E-40 334.1 27.8 175 1291-1490 363-546 (591)
367 PRK09452 potA putrescine/sperm 100.0 9.1E-36 2E-40 356.3 22.7 206 643-858 13-235 (375)
368 cd03296 ABC_CysA_sulfate_impor 100.0 1.3E-35 2.8E-40 337.8 22.8 207 644-857 2-226 (239)
369 cd03290 ABCC_SUR1_N The SUR do 100.0 1.4E-35 3.1E-40 332.7 22.9 198 646-845 2-218 (218)
370 TIGR00630 uvra excinuclease AB 100.0 6E-35 1.3E-39 378.2 31.9 97 1393-1489 816-923 (924)
371 TIGR01184 ntrCD nitrate transp 100.0 7.7E-36 1.7E-40 337.3 20.6 190 1285-1490 1-203 (230)
372 COG1123 ATPase components of v 100.0 1.2E-35 2.6E-40 356.9 23.3 224 1267-1499 5-253 (539)
373 PRK13651 cobalt transporter AT 100.0 1.1E-35 2.5E-40 348.1 22.6 209 644-858 2-255 (305)
374 PRK10851 sulfate/thiosulfate t 100.0 1.1E-35 2.4E-40 354.0 22.7 208 644-858 2-227 (353)
375 COG0411 LivG ABC-type branched 100.0 2.4E-36 5.2E-41 325.6 14.9 213 1268-1493 5-241 (250)
376 PRK09580 sufC cysteine desulfu 100.0 3.2E-35 7E-40 336.6 24.9 211 1268-1489 2-233 (248)
377 TIGR03258 PhnT 2-aminoethylpho 100.0 9E-36 1.9E-40 355.2 21.1 209 643-858 4-229 (362)
378 PRK11000 maltose/maltodextrin 100.0 1.5E-35 3.2E-40 355.8 22.5 208 644-858 3-224 (369)
379 cd03260 ABC_PstB_phosphate_tra 100.0 1.1E-35 2.4E-40 335.8 20.1 203 645-854 1-226 (227)
380 cd03231 ABC_CcmA_heme_exporter 100.0 2.4E-35 5.2E-40 326.4 22.1 194 1268-1475 1-198 (201)
381 PRK00635 excinuclease ABC subu 100.0 1.5E-34 3.3E-39 387.4 34.1 209 1267-1493 600-908 (1809)
382 cd03219 ABC_Mj1267_LivG_branch 100.0 1.4E-35 3E-40 337.0 20.8 207 645-857 1-232 (236)
383 PRK13646 cbiO cobalt transport 100.0 2.1E-35 4.6E-40 344.2 22.8 207 644-857 2-235 (286)
384 cd03267 ABC_NatA_like Similar 100.0 1.5E-35 3.2E-40 336.3 20.8 191 1282-1484 34-236 (236)
385 cd03259 ABC_Carb_Solutes_like 100.0 1.3E-35 2.8E-40 331.9 20.0 196 645-850 1-213 (213)
386 COG4619 ABC-type uncharacteriz 100.0 7.3E-36 1.6E-40 300.0 15.9 199 1275-1483 9-215 (223)
387 PRK13537 nodulation ABC transp 100.0 2.3E-35 5E-40 346.2 22.8 206 643-858 6-228 (306)
388 COG4175 ProV ABC-type proline/ 100.0 2.3E-35 5E-40 324.2 20.9 224 1267-1501 4-266 (386)
389 PRK13647 cbiO cobalt transport 100.0 1.9E-35 4.1E-40 342.5 21.5 203 644-855 4-225 (274)
390 cd03216 ABC_Carb_Monos_I This 100.0 3.5E-35 7.7E-40 313.7 21.9 159 1268-1482 1-162 (163)
391 PRK15439 autoinducer 2 ABC tra 100.0 3.9E-35 8.5E-40 368.9 26.0 213 1267-1492 11-230 (510)
392 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.8E-35 3.9E-40 332.4 20.5 201 645-852 1-218 (220)
393 PRK11153 metN DL-methionine tr 100.0 2.4E-35 5.3E-40 351.2 22.7 207 645-858 2-231 (343)
394 COG4615 PvdE ABC-type sideroph 100.0 4E-32 8.7E-37 304.6 46.7 501 319-849 4-529 (546)
395 cd03265 ABC_DrrA DrrA is the A 100.0 1.8E-35 3.9E-40 332.4 20.1 201 645-855 1-219 (220)
396 PRK13549 xylose transporter AT 100.0 2.7E-35 5.9E-40 370.5 23.7 212 1267-1491 5-232 (506)
397 cd03248 ABCC_TAP TAP, the Tran 100.0 4.3E-35 9.3E-40 330.7 22.7 204 642-846 9-226 (226)
398 PRK14250 phosphate ABC transpo 100.0 4.5E-35 9.7E-40 333.6 23.0 201 644-857 3-221 (241)
399 cd03226 ABC_cobalt_CbiO_domain 100.0 1.5E-35 3.3E-40 329.3 18.6 189 646-847 1-205 (205)
400 cd03369 ABCC_NFT1 Domain 2 of 100.0 6E-35 1.3E-39 325.0 23.5 189 643-851 5-206 (207)
401 TIGR02315 ABC_phnC phosphonate 100.0 3.5E-35 7.6E-40 335.2 22.1 206 645-855 2-233 (243)
402 PRK13644 cbiO cobalt transport 100.0 4.3E-35 9.2E-40 339.5 23.1 204 645-857 2-224 (274)
403 TIGR00960 3a0501s02 Type II (G 100.0 1.9E-35 4.1E-40 331.3 19.2 193 645-846 2-216 (216)
404 PRK13635 cbiO cobalt transport 100.0 5E-35 1.1E-39 339.7 23.2 204 643-858 4-230 (279)
405 cd03256 ABC_PhnC_transporter A 100.0 3.3E-35 7.3E-40 335.0 21.4 207 645-856 1-233 (241)
406 PRK14242 phosphate transporter 100.0 3.7E-35 8.1E-40 337.0 21.9 204 643-857 5-237 (253)
407 cd03268 ABC_BcrA_bacitracin_re 100.0 3.8E-35 8.3E-40 326.8 21.3 192 645-850 1-208 (208)
408 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 6.6E-35 1.4E-39 331.3 23.5 204 645-858 2-222 (236)
409 PRK09700 D-allose transporter 100.0 3E-35 6.5E-40 370.7 22.9 212 1267-1491 5-234 (510)
410 PRK13641 cbiO cobalt transport 100.0 4.3E-35 9.2E-40 341.8 22.4 207 644-857 2-234 (287)
411 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.3E-35 5E-40 331.1 19.4 198 645-846 1-218 (218)
412 PRK10762 D-ribose transporter 100.0 4.1E-35 8.8E-40 368.5 23.7 212 1267-1491 4-230 (501)
413 cd03224 ABC_TM1139_LivF_branch 100.0 3.1E-35 6.7E-40 331.0 20.1 203 645-856 1-220 (222)
414 PRK11607 potG putrescine trans 100.0 4.4E-35 9.6E-40 351.1 22.5 210 642-858 17-240 (377)
415 COG0410 LivF ABC-type branched 100.0 4.5E-35 9.8E-40 313.4 20.1 207 644-858 3-227 (237)
416 cd03218 ABC_YhbG The ABC trans 100.0 5E-35 1.1E-39 331.6 21.6 206 645-857 1-222 (232)
417 PRK13538 cytochrome c biogenes 100.0 5E-35 1.1E-39 324.7 21.1 194 1268-1475 2-202 (204)
418 TIGR01288 nodI ATP-binding ABC 100.0 5.9E-35 1.3E-39 343.2 22.9 205 643-857 3-224 (303)
419 PRK11629 lolD lipoprotein tran 100.0 5.4E-35 1.2E-39 331.4 21.6 201 644-851 5-228 (233)
420 PRK14273 phosphate ABC transpo 100.0 7.2E-35 1.6E-39 334.7 22.8 204 643-857 6-238 (254)
421 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4E-35 8.6E-40 334.4 20.4 209 645-857 1-225 (242)
422 PRK14269 phosphate ABC transpo 100.0 6.1E-35 1.3E-39 333.6 21.9 203 644-857 2-230 (246)
423 TIGR00972 3a0107s01c2 phosphat 100.0 6.2E-35 1.4E-39 333.8 22.0 208 644-857 1-232 (247)
424 PRK09536 btuD corrinoid ABC tr 100.0 5.9E-35 1.3E-39 351.0 22.6 205 644-858 3-229 (402)
425 cd03235 ABC_Metallic_Cations A 100.0 4.6E-35 1E-39 327.4 20.2 193 647-850 2-213 (213)
426 PRK10938 putative molybdenum t 100.0 6.1E-35 1.3E-39 366.4 23.7 213 1267-1493 3-226 (490)
427 PRK11247 ssuB aliphatic sulfon 100.0 8.8E-35 1.9E-39 332.9 22.8 197 643-853 11-219 (257)
428 PRK10261 glutathione transport 100.0 4E-35 8.7E-40 375.9 22.4 219 1267-1493 12-260 (623)
429 cd03258 ABC_MetN_methionine_tr 100.0 7.4E-35 1.6E-39 330.4 21.9 209 645-857 2-230 (233)
430 PRK13636 cbiO cobalt transport 100.0 8.1E-35 1.8E-39 338.8 22.7 207 643-858 4-232 (283)
431 PRK15079 oligopeptide ABC tran 100.0 5.6E-35 1.2E-39 345.4 21.4 211 642-858 6-252 (331)
432 cd03266 ABC_NatA_sodium_export 100.0 6E-35 1.3E-39 327.8 20.6 202 645-850 2-218 (218)
433 cd03263 ABC_subfamily_A The AB 100.0 7.5E-35 1.6E-39 327.4 21.3 198 645-855 1-219 (220)
434 cd03294 ABC_Pro_Gly_Bertaine T 100.0 4.5E-35 9.8E-40 338.6 20.1 203 646-858 26-251 (269)
435 cd03257 ABC_NikE_OppD_transpor 100.0 7.1E-35 1.5E-39 329.5 20.9 204 645-850 2-228 (228)
436 cd03301 ABC_MalK_N The N-termi 100.0 7.2E-35 1.6E-39 325.9 20.7 196 645-850 1-213 (213)
437 PRK13640 cbiO cobalt transport 100.0 1.1E-34 2.4E-39 337.5 22.8 208 642-857 3-232 (282)
438 PRK13536 nodulation factor exp 100.0 9E-35 2E-39 344.5 22.3 206 642-857 39-261 (340)
439 PRK15134 microcin C ABC transp 100.0 1.2E-34 2.5E-39 366.7 24.6 219 1267-1493 5-248 (529)
440 cd03247 ABCC_cytochrome_bd The 100.0 1E-34 2.3E-39 315.1 20.8 166 645-850 1-178 (178)
441 COG4608 AppF ABC-type oligopep 100.0 9E-35 1.9E-39 320.7 20.3 194 1267-1500 4-209 (268)
442 PRK13632 cbiO cobalt transport 100.0 1.4E-34 3E-39 335.1 23.0 207 643-857 6-231 (271)
443 TIGR02211 LolD_lipo_ex lipopro 100.0 1.2E-34 2.5E-39 326.1 21.6 196 645-847 2-220 (221)
444 PRK13642 cbiO cobalt transport 100.0 1.5E-34 3.2E-39 335.8 23.0 204 644-858 4-230 (277)
445 PRK09493 glnQ glutamine ABC tr 100.0 1.3E-34 2.8E-39 329.8 22.1 203 645-857 2-225 (240)
446 PRK10744 pstB phosphate transp 100.0 1.4E-34 3.1E-39 333.3 22.6 206 643-857 12-244 (260)
447 PRK13645 cbiO cobalt transport 100.0 9.9E-35 2.1E-39 339.4 21.6 212 643-857 5-240 (289)
448 PRK13543 cytochrome c biogenes 100.0 1.8E-34 3.8E-39 322.7 22.7 195 1267-1477 11-212 (214)
449 TIGR02324 CP_lyasePhnL phospho 100.0 1.2E-34 2.6E-39 326.7 21.3 198 1268-1475 2-222 (224)
450 TIGR01257 rim_protein retinal- 100.0 1E-34 2.2E-39 395.0 24.6 215 1267-1493 928-1151(2272)
451 PRK13649 cbiO cobalt transport 100.0 1.6E-34 3.4E-39 336.5 22.7 208 644-857 2-234 (280)
452 PRK10619 histidine/lysine/argi 100.0 1.3E-34 2.7E-39 333.2 21.3 205 643-857 4-241 (257)
453 PRK11831 putative ABC transpor 100.0 1.1E-34 2.4E-39 335.5 20.9 206 643-858 6-234 (269)
454 COG4175 ProV ABC-type proline/ 100.0 5.7E-35 1.2E-39 321.1 17.4 209 643-859 3-256 (386)
455 TIGR03415 ABC_choXWV_ATP choli 100.0 1.1E-34 2.3E-39 346.1 21.3 191 660-858 37-255 (382)
456 cd03269 ABC_putative_ATPase Th 100.0 1.1E-34 2.4E-39 323.6 20.1 199 645-850 1-210 (210)
457 PRK13633 cobalt transporter AT 100.0 2.4E-34 5.2E-39 334.5 23.5 204 644-858 4-234 (280)
458 PRK13540 cytochrome c biogenes 100.0 1.5E-34 3.3E-39 319.9 20.7 193 1268-1474 2-198 (200)
459 COG1131 CcmA ABC-type multidru 100.0 1.1E-34 2.3E-39 337.3 20.5 201 644-857 4-226 (293)
460 PRK11288 araG L-arabinose tran 100.0 1.7E-34 3.6E-39 362.9 23.9 207 1267-1486 4-224 (501)
461 PRK14235 phosphate transporter 100.0 2E-34 4.3E-39 333.1 22.4 206 641-857 16-251 (267)
462 PLN03211 ABC transporter G-25; 100.0 2.5E-34 5.4E-39 367.6 25.3 199 1282-1491 81-296 (659)
463 COG4555 NatA ABC-type Na+ tran 100.0 2.8E-35 6.1E-40 305.1 13.4 206 645-857 2-222 (245)
464 TIGR02633 xylG D-xylose ABC tr 100.0 1.8E-34 3.9E-39 363.0 23.6 211 1268-1490 2-229 (500)
465 PRK11231 fecE iron-dicitrate t 100.0 2.5E-34 5.3E-39 330.4 22.6 204 644-857 2-227 (255)
466 PRK11300 livG leucine/isoleuci 100.0 2.4E-34 5.3E-39 330.7 22.5 210 643-857 4-243 (255)
467 PRK13539 cytochrome c biogenes 100.0 2.6E-34 5.6E-39 319.7 21.9 194 1267-1477 2-200 (207)
468 PRK13548 hmuV hemin importer A 100.0 3.7E-34 8.1E-39 329.1 23.9 207 644-857 2-230 (258)
469 PRK14245 phosphate ABC transpo 100.0 1.4E-34 3.1E-39 331.4 20.3 210 643-857 2-234 (250)
470 PRK10070 glycine betaine trans 100.0 1.5E-34 3.1E-39 347.4 21.2 191 661-858 42-255 (400)
471 PRK11264 putative amino-acid A 100.0 3.1E-34 6.7E-39 328.8 23.0 207 644-857 3-233 (250)
472 PRK14274 phosphate ABC transpo 100.0 2.6E-34 5.5E-39 331.0 22.4 206 643-857 11-243 (259)
473 TIGR03410 urea_trans_UrtE urea 100.0 1.3E-34 2.9E-39 327.6 19.5 202 645-855 1-219 (230)
474 cd03223 ABCD_peroxisomal_ALDP 100.0 2.3E-34 4.9E-39 308.5 20.2 161 645-844 1-163 (166)
475 PRK13648 cbiO cobalt transport 100.0 3.4E-34 7.4E-39 331.6 23.1 208 643-858 6-232 (269)
476 PRK10584 putative ABC transpor 100.0 3E-34 6.4E-39 324.4 22.0 200 643-849 5-227 (228)
477 PRK14259 phosphate ABC transpo 100.0 3.4E-34 7.3E-39 331.3 22.9 208 642-858 11-254 (269)
478 PRK11614 livF leucine/isoleuci 100.0 3.7E-34 8.1E-39 325.4 22.9 205 644-857 5-226 (237)
479 PRK10895 lipopolysaccharide AB 100.0 2.5E-34 5.4E-39 327.7 21.5 207 644-857 3-226 (241)
480 PRK10982 galactose/methyl gala 100.0 2.1E-34 4.6E-39 361.4 22.9 208 1270-1490 1-222 (491)
481 PRK14248 phosphate ABC transpo 100.0 3.5E-34 7.6E-39 331.5 22.9 211 642-857 19-252 (268)
482 PRK10575 iron-hydroxamate tran 100.0 3.2E-34 6.9E-39 331.1 22.5 205 642-857 9-237 (265)
483 PRK14268 phosphate ABC transpo 100.0 2.5E-34 5.4E-39 330.8 21.6 206 643-857 11-242 (258)
484 PRK14237 phosphate transporter 100.0 3E-34 6.6E-39 331.5 22.3 205 642-857 18-251 (267)
485 cd03264 ABC_drug_resistance_li 100.0 1.7E-34 3.8E-39 322.3 19.6 190 645-850 1-211 (211)
486 PRK13638 cbiO cobalt transport 100.0 3.2E-34 6.9E-39 332.2 22.4 204 645-858 2-226 (271)
487 PRK10247 putative ABC transpor 100.0 2.2E-34 4.8E-39 324.5 20.4 203 643-853 6-223 (225)
488 TIGR02769 nickel_nikE nickel i 100.0 2.3E-34 5.1E-39 332.2 21.2 209 644-858 2-241 (265)
489 COG4559 ABC-type hemin transpo 100.0 2.7E-34 5.9E-39 300.0 19.4 213 1268-1493 2-232 (259)
490 cd03292 ABC_FtsE_transporter F 100.0 1.9E-34 4.2E-39 322.7 19.7 196 645-846 1-214 (214)
491 PRK13652 cbiO cobalt transport 100.0 4.4E-34 9.5E-39 331.8 23.4 205 644-857 3-227 (277)
492 COG4178 ABC-type uncharacteriz 100.0 7.6E-31 1.6E-35 319.3 52.4 442 389-842 106-587 (604)
493 KOG0066 eIF2-interacting prote 100.0 2.7E-34 5.8E-39 322.7 20.6 193 1267-1483 586-782 (807)
494 TIGR01189 ccmA heme ABC export 100.0 3.3E-34 7.1E-39 316.8 21.2 192 1268-1474 1-197 (198)
495 TIGR03771 anch_rpt_ABC anchore 100.0 1.4E-34 3E-39 325.5 18.5 186 1290-1492 1-202 (223)
496 TIGR03411 urea_trans_UrtD urea 100.0 4.2E-34 9.1E-39 326.1 22.5 208 644-857 2-231 (242)
497 PRK10253 iron-enterobactin tra 100.0 3.8E-34 8.2E-39 330.5 22.4 210 642-857 5-233 (265)
498 PRK11022 dppD dipeptide transp 100.0 2.5E-34 5.3E-39 339.9 21.3 209 644-858 3-244 (326)
499 PRK14247 phosphate ABC transpo 100.0 3.7E-34 7.9E-39 328.2 21.8 205 644-857 3-234 (250)
500 PRK14249 phosphate ABC transpo 100.0 4.7E-34 1E-38 327.4 22.6 206 643-857 3-235 (251)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.4e-283 Score=2694.87 Aligned_cols=1249 Identities=48% Similarity=0.798 Sum_probs=1170.2
Q ss_pred CCCCccCch--hHHHHHHhHHHHHHccccCCCCCCCCCCCChhchHHHHHHHHhhcCCCCCCC--CCCchHHHHHHHHHH
Q 000438 253 VSGFASASI--LSKAFWIWMNPLLSKGYKSPLKIDEIPSLSPQHRAERMSELFESKWPKPHEK--CKHPVRTTLLRCFWK 328 (1510)
Q Consensus 253 ~~p~~~a~~--~s~~~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~--~~~~l~~al~~~~~~ 328 (1510)
+.|.+.++. +|+++|||++|++++|||++|+.+|+|+|+++|+++.+.++|+++|+++.++ ++|+++++++++||+
T Consensus 122 ~~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~~~~~psl~~al~~~f~~ 201 (1381)
T KOG0054|consen 122 PNPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGRSGKKPSLLRALLRTFGR 201 (1381)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhccccCCcHHHHHHHHHHHH
Confidence 445555555 9999999999999999999999999999999999999999999999987543 478999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 329 EVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITSL 408 (1510)
Q Consensus 329 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR~~L~~~I 408 (1510)
++++.++++++.+++.|++|++|+.+|+|+++++.+.+.||+||+++|++.++++++.|||+|.++++|+|+|++|+++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~I 281 (1381)
T KOG0054|consen 202 TFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAI 281 (1381)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999877788999999999999999999999999999999999999999999
Q ss_pred HHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 409 YRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVITTVVGIIGVMIFVVMG 488 (1510)
Q Consensus 409 y~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~~l~~~~~~~~ 488 (1510)
|||+|++++.++++++.|+|+|+|++|++|+++++.++|.+|++|+|+++++++||+++|+++++|++++++++|+|.++
T Consensus 282 Y~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~ 361 (1381)
T KOG0054|consen 282 YRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFL 361 (1381)
T ss_pred HHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 489 TKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWSTPVLISTL 568 (1510)
Q Consensus 489 ~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~~~~p~~v~~~ 568 (1510)
+++++++|++.|+.+|+|+|+|||+|+|||+|||||||++|.++|+++|++|++++||..|+.+++.++++++|++++++
T Consensus 362 a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~ 441 (1381)
T KOG0054|consen 362 AKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVV 441 (1381)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccccCCCCCCccEEE
Q 000438 569 TFATAL-LFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEV 647 (1510)
Q Consensus 569 tF~~~~-l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~ 647 (1510)
||++|+ +.|+.+||+++|+++++||+|+.|+.++|+.+++++|++||++|+++||..+|.+++..++.+.++.+.+|++
T Consensus 442 tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i~i 521 (1381)
T KOG0054|consen 442 TFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENAIEI 521 (1381)
T ss_pred HHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCceEEE
Confidence 999999 7788999999999999999999999999999999999999999999999999998877665455556678999
Q ss_pred eeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCeEEEEcCCCcCCCccHHHH
Q 000438 648 RDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGTTAYVAQTSWIQNGTIEEN 727 (1510)
Q Consensus 648 ~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~iayv~Q~~~i~~~Tv~en 727 (1510)
+|++|+|+++++.++|+||||+|++|+++||||++||||||||++|+|||++.+|+|.++|++|||||+|||+|+|||||
T Consensus 522 ~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv~Q~pWI~ngTvreN 601 (1381)
T KOG0054|consen 522 KNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYVPQQPWIQNGTVREN 601 (1381)
T ss_pred eeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEeccccHhhCCcHHHh
Confidence 99999999866667999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHH
Q 000438 728 ILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSD 807 (1510)
Q Consensus 728 I~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~ 807 (1510)
|+||.|||++||++|+++|+|++|++.+|.||+|+|||||.||||||||||+||||+|+|+||||||||+||||+|+++|
T Consensus 602 ILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~ 681 (1381)
T KOG0054|consen 602 ILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKH 681 (1381)
T ss_pred hhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCC
Q 000438 808 IFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNS 887 (1510)
Q Consensus 808 i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~ 887 (1510)
||++|+++.+++||+|+|||++++|++||+|++|+||+|.++|+|+|+++.+.+|.++..+.+ .+..+. ...+. .
T Consensus 682 if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~--~~~~~~-~~~~~--~ 756 (1381)
T KOG0054|consen 682 IFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEE--SEQEEE-ASEKD--L 756 (1381)
T ss_pred HHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccc--hhhccc-ccccc--c
Confidence 999999999999999999999999999999999999999999999999999999998833222 111110 00000 0
Q ss_pred CCCCCCCCc-cccccccccCCccccccccccCCchhhhHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhh
Q 000438 888 PKTPKSPQI-TSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLM 966 (1510)
Q Consensus 888 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~ 966 (1510)
+........ ....+..... .......++...++.++|+++.|.|+|++|+.|+++.+|++.+++++++.++.+++.+
T Consensus 757 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~ 834 (1381)
T KOG0054|consen 757 ESGESSRESESRSLESLSSE--EEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQI 834 (1381)
T ss_pred cccccccchhhhhhhhhccc--ccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 000000000 0000000000 0001112223567888999999999999999999998888888888899999999999
Q ss_pred hhhhhhhhccccCCCCC---CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccc
Q 000438 967 AGDYWLSYETSEDHSMS---FNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPS 1043 (1510)
Q Consensus 967 ~~~~wl~~~~~~~~~~~---~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~ 1043 (1510)
+++||+++|++...... .+...|+++|+++++++.++.+++++.+..++.++|+.||++|+++++|+||+|||+||+
T Consensus 835 ~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~ 914 (1381)
T KOG0054|consen 835 ASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPT 914 (1381)
T ss_pred HHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCc
Confidence 99999999997643222 467899999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 000438 1044 GRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKA 1123 (1510)
Q Consensus 1044 G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~s 1123 (1510)
|||+||||+|++.+|..+|..+..++.++++++++++++++++|+++++++|+.++++++++||++++||++|+++++||
T Consensus 915 GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRS 994 (1381)
T KOG0054|consen 915 GRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRS 994 (1381)
T ss_pred cchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHhccCccChh
Q 000438 1124 PVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPE 1203 (1510)
Q Consensus 1124 p~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g 1203 (1510)
|+++||+||++|+.|||||++|++|.+++..++|.+++++|...+++||+++|+|++++++++++++++++.+.+..+||
T Consensus 995 Pi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~~~g 1074 (1381)
T KOG0054|consen 995 PIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGLISPG 1074 (1381)
T ss_pred hHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888776658899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEEEEEEecCCCCc
Q 000438 1204 NVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPL 1283 (1510)
Q Consensus 1204 ~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~ 1283 (1510)
.+|++++|++++++.++|++|+.+++|++|+||||+.||.++|+|+|+..+..+||++||++|+|+|+|+++||+|+.|+
T Consensus 1075 ~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~lp~ 1154 (1381)
T KOG0054|consen 1075 LVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPNLPL 1154 (1381)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCCCcc
Confidence 99999999999999999999999999999999999999999999987777777799999999999999999999999999
Q ss_pred ceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhc
Q 000438 1284 VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNI 1363 (1510)
Q Consensus 1284 vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NL 1363 (1510)
|||||||+|+||||||||||||||||||+++|||+.||.+|+|.|||+||+++++||||++++||||||+||+||||+||
T Consensus 1155 VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NL 1234 (1381)
T KOG0054|consen 1155 VLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNL 1234 (1381)
T ss_pred hhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHH
Q 000438 1364 DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI 1443 (1510)
Q Consensus 1364 dp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~I 1443 (1510)
||+++|+|+|||+|||+|+|+++|+++|+|||++|.|+|+|||+||||++||||||||++||||||||||+||++||..|
T Consensus 1235 DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lI 1314 (1381)
T KOG0054|consen 1235 DPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALI 1314 (1381)
T ss_pred CcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCC-cHHHHHHHHHhhhhc
Q 000438 1444 QRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERP-SLFGALVQEYANRSA 1508 (1510)
Q Consensus 1444 q~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~-~~f~~lv~~~~~~~~ 1508 (1510)
|++||++|+|||||+||||++||+|||||+|||+|+|+|+|+|++|++++ |.|++++++++.++.
T Consensus 1315 Q~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~~~~~ 1380 (1381)
T KOG0054|consen 1315 QKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAALSSR 1380 (1381)
T ss_pred HHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999997 999999999987664
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=9.4e-220 Score=2230.83 Aligned_cols=1437 Identities=33% Similarity=0.550 Sum_probs=1209.7
Q ss_pred hccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCCccccccccccccchhHHHHHHHHHHHHHHHHHH
Q 000438 35 FIFLSPCPQRALLSFVDLLFLLALIVFAVQKLYSKFTASGLSSSDISKPLIRNNRASVRTTLWFKLSLIVTALLALCFTV 114 (1510)
Q Consensus 35 ~~~~~~c~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1510)
+..++||++++++.|+|++|+++++++.++... +. .... .+.. ...+......+.+++|....++...
T Consensus 26 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (1622)
T PLN03130 26 FGAYTPCATDSLVINISHLVLLGLCLYRIWLIK-KD-HKVQ------RFCL----RSKWYNYFLALLAAYCTAEPLFRLV 93 (1622)
T ss_pred cCCCCccHHhhHHHHHHHHHHHHHHHHHHHHhc-cc-cccC------Cccc----cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 333999999999999999999999998777552 21 0000 1110 0011112333344444444444433
Q ss_pred HHHHHhccCCCCc--cchHH-HHHHHHHHHHHHHHHHHHHHhhhcccccCchHHHHHHHHH---HHHHHHHhhHHHHHHh
Q 000438 115 ICILTFSGSTQWP--WKLVD-ALFWLVHAITHAVIAILIVHEKKFEAVTHPLSLRIYWVAN---FIIVSLFTTSGIIRLV 188 (1510)
Q Consensus 115 ~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~~---~~~~~~~~~~~~~~~~ 188 (1510)
.++..+..+.... ...+. ++.+++..++++++.++...++. ++.++++.+++||++. ++|.++.. .....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 169 (1622)
T PLN03130 94 MGISVLNLDGQTSLPPFEIVSLIVEALTWCSMLVMIGVETKIYI-REFRWYVRFAVIYVLVGDAVMLNLVLS---VKEYY 169 (1622)
T ss_pred HHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHH-hcCCCcceeehhHHHhhHHHHHHHHHH---HHHHH
Confidence 3333322222112 22333 55566666777766665445544 4678999999999998 66655511 11111
Q ss_pred hhhhhhccccccccchhhHHHHHHHHHHHHH-HHcccCcccC-CCCCCCCccccccc-ccccCCCCCCCCCccCchhHHH
Q 000438 189 SFETAQFCSLKLDDIVSIVSFPLLTVLLFIA-IRGSTGIAVN-SDSEPGMDEKTKLY-EPLLSKSDVVSGFASASILSKA 265 (1510)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~a~~~s~~ 265 (1510)
.+. .. ..++..+.+.+.+.++. +... +.... ...... .+.+-.. .++.+.+.+++||++||+|||+
T Consensus 170 ~~~-----~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~ 238 (1622)
T PLN03130 170 SSF-----VL----YLYISEVAAQVLFGILLLVYFP-NLDPYPGYTPIG-SESVDDYEYEELPGGEQICPERHANIFSRI 238 (1622)
T ss_pred hcc-----cc----ceehhHHHHHHHHHHHHHHHHh-cCCCCccccccc-ccccccccccCCcccCCCCcccccCHHHHH
Confidence 110 00 11333333333322222 1111 11110 000000 0000000 0112335678999999999999
Q ss_pred HHHhHHHHHHccccCCCCCCCCCCCChhchHHHHHHHHhhcCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 266 FWIWMNPLLSKGYKSPLKIDEIPSLSPQHRAERMSELFESKWPKPHEKCKHPVRTTLLRCFWKEVAFTAFLAIVRLCVMY 345 (1510)
Q Consensus 266 ~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~~~~~l~~al~~~~~~~~~~~~~~~l~~~~~~~ 345 (1510)
+|+|++|++++|||++|+.+|||+|+++|+++.+.++|++.|+++.++++|+|+++++++||+.++..++++++.+++.+
T Consensus 239 ~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~ 318 (1622)
T PLN03130 239 FFGWMTPLMQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEELKKPKPWLLRALNNSLGGRFWLGGFFKIGNDLSQF 318 (1622)
T ss_pred HHHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998766677999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhccCCH
Q 000438 346 VGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITSLYRKGLRLSCSARQAHGV 425 (1510)
Q Consensus 346 ~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~ 425 (1510)
++|++++.+++++.+++ ..+.||.++++++++.++.+++.++|++...++++++|+.+...||+|.++++...+++.++
T Consensus 319 ~~P~ll~~li~~v~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~ 397 (1622)
T PLN03130 319 VGPLLLNLLLESMQNGE-PAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTS 397 (1622)
T ss_pred HHHHHHHHHHHHHhcCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCH
Confidence 99999999999997654 34678888888888888888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 426 GQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDS 505 (1510)
Q Consensus 426 G~ivNlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~~l~~~~~~~~~~~~~~~q~~~m~~~D~ 505 (1510)
|+++|+|++|++++.+++.++|.+|..|+++++++++||..+|+++++|++++++++|++.++++++++.++++|+.+|+
T Consensus 398 G~ivnl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~ 477 (1622)
T PLN03130 398 GKITNLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDK 477 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCHHHH
Q 000438 506 RMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWSTPVLISTLTFATALLFGVPLDAGSV 585 (1510)
Q Consensus 506 Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~~~~p~~v~~~tF~~~~l~~~~Lta~~v 585 (1510)
|++.++|+|+|||+||+|+||+.|.+++++.|++|++..++..+..++..+++...|.++++++|++|.+.++++|++.+
T Consensus 478 r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~v 557 (1622)
T PLN03130 478 RIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARA 557 (1622)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999988888888888988999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccccCCCCCCccEEEeeeEEEccCCCCccccce
Q 000438 586 FTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKN 665 (1510)
Q Consensus 586 Ft~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~ 665 (1510)
|+++++|++++.|+..+|..+..+.++++|++||++||+.+|....... +.......|+++|++|+|++.+++++|+|
T Consensus 558 f~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~~--~~~~~~~~I~~~nvsf~y~~~~~~~vL~~ 635 (1622)
T PLN03130 558 FTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPNP--PLEPGLPAISIKNGYFSWDSKAERPTLSN 635 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccCC--cccCCCCceEEEeeEEEccCCCCCceeec
Confidence 9999999999999999999999999999999999999987765322111 11112346999999999975445689999
Q ss_pred eeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCC-cEEEECCeEEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHH
Q 000438 666 INLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKIS-GKVKVCGTTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVR 744 (1510)
Q Consensus 666 i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~-G~i~~~g~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~ 744 (1510)
+||+|++||+++|+||+|||||||+++|+|+++|++ |+|.++|++|||+|+||++++||||||+||.|+++++|+++++
T Consensus 636 inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~ 715 (1622)
T PLN03130 636 INLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAID 715 (1622)
T ss_pred eeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHH
Confidence 999999999999999999999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEE
Q 000438 745 VCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIIL 824 (1510)
Q Consensus 745 ~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvil 824 (1510)
+|+|.+|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++++++.++|||+|+
T Consensus 716 a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIl 795 (1622)
T PLN03130 716 VTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVL 795 (1622)
T ss_pred HhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988889999999
Q ss_pred EccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccc
Q 000438 825 VTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEAN 904 (1510)
Q Consensus 825 vtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 904 (1510)
|||+++.++.||+|++|++|+|+++|+++|+++.++.|.++...+....+..+...+.. ..+..............
T Consensus 796 VTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~- 871 (1622)
T PLN03130 796 VTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEEE---DDQTSSKPVANGNANNL- 871 (1622)
T ss_pred EECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhccccccccccccccc---ccccccccccccccccc-
Confidence 99999999999999999999999999999999888888888765332111000000000 00000000000000000
Q ss_pred cCCccccccccccCCchhhhHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCC
Q 000438 905 GENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSF 984 (1510)
Q Consensus 905 ~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~ 984 (1510)
.+ +.......+.....+.++|+++.|.+++++|+.|+++.++++.+.+++++.++.+++.+++++|+++|++.......
T Consensus 872 ~~-~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~ 950 (1622)
T PLN03130 872 KK-DSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPKTH 950 (1622)
T ss_pred cc-cccccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC
Confidence 00 00000011112234567788999999999999999987776666666677778888999999999999864322223
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHH
Q 000438 985 NPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFF 1064 (1510)
Q Consensus 985 ~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~ 1064 (1510)
....|+++|++++++..++.+++.+++...+.++++++|++++++++++|++|||++|+|+|+|||++|++.+|..++..
T Consensus 951 ~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~ 1030 (1622)
T PLN03130 951 GPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVF 1030 (1622)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 34678889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCc
Q 000438 1065 VGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGK 1144 (1510)
Q Consensus 1065 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~ 1144 (1510)
+..++..++.+++.+++++..+|..+++++|+.++++.++++|.+++|+++|++.++++|+++||.|+++|+.|||+|++
T Consensus 1031 ~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~ 1110 (1622)
T PLN03130 1031 VNMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKA 1110 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcH
Confidence 99999999999999999988888877888888888888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHhccC----ccChhHHHHHHHHHHHHHHHHH
Q 000438 1145 QTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSS----IIKPENVGLSLSYGLSLNGVLF 1220 (1510)
Q Consensus 1145 ~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~----~~~~g~~Gl~l~y~l~l~~~l~ 1220 (1510)
+++|.+.+.+.+|.+.+..+.....++|+++++++++.+++.+.+.+.+..... ...++.+|++++|++.+...+.
T Consensus 1111 ~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~ 1190 (1622)
T PLN03130 1111 YDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLT 1190 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999887766655544432211 1126789999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEE
Q 000438 1221 WAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGV 1300 (1510)
Q Consensus 1221 ~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgI 1300 (1510)
++++.+..+|+.++|+||+.+|.+.|+|++...++..+++.||.+|.|+|+||+|+|+++.++||||+||+|+|||||||
T Consensus 1191 ~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaI 1270 (1622)
T PLN03130 1191 AVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGI 1270 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEE
Confidence 99999999999999999999999999887654444456778999999999999999998877899999999999999999
Q ss_pred ECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCCCCCHHHHHHHHHH
Q 000438 1301 VGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLER 1380 (1510)
Q Consensus 1301 VGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~ 1380 (1510)
|||||||||||+++|+|+|+|++|+|+|||+||++++++++|++|++|||||+||+||||+||||+++++|+|||+||++
T Consensus 1271 VGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~ 1350 (1622)
T PLN03130 1271 VGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLER 1350 (1622)
T ss_pred ECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEe
Q 000438 1381 CQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIA 1460 (1510)
Q Consensus 1381 ~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IA 1460 (1510)
|+++++|.++|+||||+|+|+|.||||||||||||||||||+|+|||||||||+||.+||+.||++|++.+++||+|+||
T Consensus 1351 a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IA 1430 (1622)
T PLN03130 1351 AHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIA 1430 (1622)
T ss_pred cCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhhhhcCEEEEEeCCEEEEecChhHHhcCC-cHHHHHHHHHhhh
Q 000438 1461 HRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERP-SLFGALVQEYANR 1506 (1510)
Q Consensus 1461 HRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~-~~f~~lv~~~~~~ 1506 (1510)
||++||++||||+|||+|+|+|+|+|++|++++ |.|++|+++++..
T Consensus 1431 HRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~~ 1477 (1622)
T PLN03130 1431 HRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGAA 1477 (1622)
T ss_pred CChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcChh
Confidence 999999999999999999999999999999985 9999999988754
No 3
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=9.2e-215 Score=2185.20 Aligned_cols=1429 Identities=31% Similarity=0.530 Sum_probs=1200.7
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHhh-hccccCCCCCCCCCccccccccccccchhHHHHHHHHHHHHHHHHHHH
Q 000438 37 FLSPCPQRALLSFVDLLFLLALIVFAVQKLY-SKFTASGLSSSDISKPLIRNNRASVRTTLWFKLSLIVTALLALCFTVI 115 (1510)
Q Consensus 37 ~~~~c~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1510)
.++|||+++++.|+|++|+++++++.++... +++ .. .+.. ...+......+.++++....++....
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (1495)
T PLN03232 28 AYTPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAK---AQ------IYVL----RKKYYNCVLGILACYCVVEPVLRLVM 94 (1495)
T ss_pred CCCccHHhhHHHHHHHHHHHHHHHHHHHHHhhccc---cC------Cccc----cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3999999999999999999999998777552 122 00 0110 00011112223333333333333222
Q ss_pred HHHHhccCC--CCccchHH-HHHHHHHHHHHHHHHHHHHHhhhcccccCchHHHHHHHHH---HHHHHHHhhHHHHHHhh
Q 000438 116 CILTFSGST--QWPWKLVD-ALFWLVHAITHAVIAILIVHEKKFEAVTHPLSLRIYWVAN---FIIVSLFTTSGIIRLVS 189 (1510)
Q Consensus 116 ~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~~---~~~~~~~~~~~~~~~~~ 189 (1510)
++..+..+. +....++. ++.+++..++++++..+...++. ++.++++++++||++. ++|.++.. ......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 170 (1495)
T PLN03232 95 GISLFDMDEETDLPPFEVASLMVEAFAWFSMLVLIGLETKQYV-KEFRWYVRFGVVYVLVADAVLLDLVLP---LKNSIN 170 (1495)
T ss_pred HhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHH-hcCCCCceeeehhHhhhhHHHHHHHHH---HHHHHh
Confidence 222221111 11123333 55677777777777775555544 4678999999999998 66665511 111111
Q ss_pred hhhhhccccccccchhhHHHHHHHHHHHHH-HHcccCcccCCC-CCCCCcccccc-cc-cccCCCCCCCCCccCchhHHH
Q 000438 190 FETAQFCSLKLDDIVSIVSFPLLTVLLFIA-IRGSTGIAVNSD-SEPGMDEKTKL-YE-PLLSKSDVVSGFASASILSKA 265 (1510)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~-~~~~~~~~~~~-~~-~~~~~~~~~~p~~~a~~~s~~ 265 (1510)
+. . ...++..+.+.+.+.+.. +... +....+. .... .+ ... .. +..+.+.+++||++||+|||+
T Consensus 171 ~~-----~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~pe~~a~~~s~~ 238 (1495)
T PLN03232 171 RT-----A----LYLCISSRCCQALFGILLLVYIP-ELDPYPGYHILN-NE-SLDNVEYDALRGGENICPERYASIFSRI 238 (1495)
T ss_pred cc-----c----cceehhHHHHHHHHHHHHHHhcc-cCCCCCcccccc-cc-cccccccccccccCCCCccccCCHHHHH
Confidence 10 0 011333333333322222 2111 1111000 0000 00 000 00 112234678999999999999
Q ss_pred HHHhHHHHHHccccCCCCCCCCCCCChhchHHHHHHHHhhcCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 266 FWIWMNPLLSKGYKSPLKIDEIPSLSPQHRAERMSELFESKWPKPHEKCKHPVRTTLLRCFWKEVAFTAFLAIVRLCVMY 345 (1510)
Q Consensus 266 ~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~~~~~l~~al~~~~~~~~~~~~~~~l~~~~~~~ 345 (1510)
+|+|++|++++|||++|+.+|||+|+++|+++.+.++|++.|+++.++++++++++++++||+.++.+++++++.+++.+
T Consensus 239 ~f~w~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~ 318 (1495)
T PLN03232 239 YFSWMTPLMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEESRRPKPWLLRALNNSLGGRFWLGGIFKIGHDLSQF 318 (1495)
T ss_pred HHHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998766667899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhccCCH
Q 000438 346 VGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITSLYRKGLRLSCSARQAHGV 425 (1510)
Q Consensus 346 ~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~ 425 (1510)
++|++++.+++++++++ ..+.||.++++++++.++.+++.++|++...++++++|+.+...+|+|.++++....++.++
T Consensus 319 ~~P~ll~~li~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~ 397 (1495)
T PLN03232 319 VGPVILSHLLQSMQEGD-PAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFAS 397 (1495)
T ss_pred HHHHHHHHHHHHHhcCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCH
Confidence 99999999999997654 34678999999999999999999999999999999999999999999999999999888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 426 GQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDS 505 (1510)
Q Consensus 426 G~ivNlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~~l~~~~~~~~~~~~~~~q~~~m~~~D~ 505 (1510)
|+++|+|++|++++.++..++|.+|..|++++++++++|..+|+++++|++++++++|++.++++++++.++++|+.+|+
T Consensus 398 G~i~n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~ 477 (1495)
T PLN03232 398 GKVTNMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDK 477 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCHHHH
Q 000438 506 RMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWSTPVLISTLTFATALLFGVPLDAGSV 585 (1510)
Q Consensus 506 Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~~~~p~~v~~~tF~~~~l~~~~Lta~~v 585 (1510)
|.+.++|+++|||+||+|+||+.|.+++++.|++|++..++..+..+...+++...|.++++++|++|.+.++++|++.+
T Consensus 478 r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~v 557 (1495)
T PLN03232 478 RVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARA 557 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 99999999999999999999999999999999999999999988888877777778888888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccccCCCCCCccEEEeeeEEEccCCCCccccce
Q 000438 586 FTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKN 665 (1510)
Q Consensus 586 Ft~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~ 665 (1510)
|+++++++.+..|+..+|..+..+.++++|++||++||+.+|...+... +.......|+++|++|+|++..++++|+|
T Consensus 558 f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~~--~~~~~~~~I~~~~vsF~y~~~~~~~vL~~ 635 (1495)
T PLN03232 558 FTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQNP--PLQPGAPAISIKNGYFSWDSKTSKPTLSD 635 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccC--CcCCCCCcEEEEeeEEEcCCCCCCceeee
Confidence 9999999999999999999999999999999999999987653221110 11112347999999999985445689999
Q ss_pred eeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCc-EEEECCeEEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHH
Q 000438 666 INLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISG-KVKVCGTTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVR 744 (1510)
Q Consensus 666 i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G-~i~~~g~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~ 744 (1510)
+||+|++||+++|+|++|||||||+++|+|+++|++| .+.+++++|||+|+||++++||||||+||.++++++|+++++
T Consensus 636 inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~ 715 (1495)
T PLN03232 636 INLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAID 715 (1495)
T ss_pred eEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHH
Confidence 9999999999999999999999999999999999997 457789999999999999999999999999999999999999
Q ss_pred HhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEE
Q 000438 745 VCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIIL 824 (1510)
Q Consensus 745 ~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvil 824 (1510)
+|++.+|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++++.+.+++||+|+
T Consensus 716 ~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~Il 795 (1495)
T PLN03232 716 VTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVL 795 (1495)
T ss_pred HhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988788999999
Q ss_pred EccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccc
Q 000438 825 VTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEAN 904 (1510)
Q Consensus 825 vtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 904 (1510)
|||+++.++.||+|++|++|+|+++|+++|+++.++.|.++...+....+..+. .+.. +..... ..... . ..
T Consensus 796 vTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~-~~~~--~~~~~~-~~~~~--~-~~- 867 (1495)
T PLN03232 796 VTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEV-NTND--ENILKL-GPTVT--I-DV- 867 (1495)
T ss_pred EECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhcccccccccc-cccc--cccccc-ccccc--c-cc-
Confidence 999999999999999999999999999999998888888887654321110000 0000 000000 00000 0 00
Q ss_pred cCCccccccccccCCchhhhHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCC
Q 000438 905 GENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSF 984 (1510)
Q Consensus 905 ~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~ 984 (1510)
.+.+.......+.....+.++|+++.|.+++++|+.|+++.++++.+.+++++.++.++..+++++|+++|++.......
T Consensus 868 ~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~ 947 (1495)
T PLN03232 868 SERNLGSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTPKSY 947 (1495)
T ss_pred cccccccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Confidence 00000000001111224567888999999999999999987776666666777777888889999999999864221123
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHH
Q 000438 985 NPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFF 1064 (1510)
Q Consensus 985 ~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~ 1064 (1510)
....|+++|++++++..++.+++.+++...+.++++++|++++++++++|++|||++|+|+++|||++|++.+|..++..
T Consensus 948 ~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~ 1027 (1495)
T PLN03232 948 SPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANL 1027 (1495)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHH
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCc
Q 000438 1065 VGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGK 1144 (1510)
Q Consensus 1065 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~ 1144 (1510)
+..++..++.+++.+++++..++...++++|+.++++.++.+|.+++|+++|++..+++|+++|+.|+++|+.|||+|+.
T Consensus 1028 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~ 1107 (1495)
T PLN03232 1028 MNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKA 1107 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCc
Confidence 99999998888888888888887777777888888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHhccCcc-----ChhHHHHHHHHHHHHHHHH
Q 000438 1145 QTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSII-----KPENVGLSLSYGLSLNGVL 1219 (1510)
Q Consensus 1145 ~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~-----~~g~~Gl~l~y~l~l~~~l 1219 (1510)
+++|.+++.+..|.+.+..+.....++|+++++++++.+++.+.+.+.+.. .+.+ .++.+|++++|+..+...+
T Consensus 1108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~l 1186 (1495)
T PLN03232 1108 YDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLR-NGNAENQAGFASTMGLLLSYTLNITTLL 1186 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cccccccccchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988876655544444332 2221 2567889999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEE
Q 000438 1220 FWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIG 1299 (1510)
Q Consensus 1220 ~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~Gekvg 1299 (1510)
.++++.+.++|+.++|+||+.+|.+.|+|++...+...+++.||.+|.|+|+||+|+|+++.++||+|+||+|+||||||
T Consensus 1187 ~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~Gekva 1266 (1495)
T PLN03232 1187 SGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVG 1266 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEE
Confidence 99999999999999999999999999888654333344566899999999999999998887789999999999999999
Q ss_pred EECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCCCCCHHHHHHHHH
Q 000438 1300 VVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLE 1379 (1510)
Q Consensus 1300 IVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~ 1379 (1510)
||||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+|||+||+
T Consensus 1267 IVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~ 1346 (1495)
T PLN03232 1267 VVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALE 1346 (1495)
T ss_pred EECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEE
Q 000438 1380 RCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISI 1459 (1510)
Q Consensus 1380 ~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~I 1459 (1510)
+++++++|+++|+||||+|+|+|.|||||||||+||||||||+|+|||||||||+||.+||+.||++|++.+++||+|+|
T Consensus 1347 ~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~I 1426 (1495)
T PLN03232 1347 RAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVI 1426 (1495)
T ss_pred HcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhhhhhcCEEEEEeCCEEEEecChhHHhcCC-cHHHHHHHHHhhh
Q 000438 1460 AHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERP-SLFGALVQEYANR 1506 (1510)
Q Consensus 1460 AHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~-~~f~~lv~~~~~~ 1506 (1510)
|||++|+++||||+|||+|+|+|+|+|+||++++ |.|++|+++.+..
T Consensus 1427 AHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1427 AHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPA 1474 (1495)
T ss_pred eCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChh
Confidence 9999999999999999999999999999999988 7999999988753
No 4
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2e-213 Score=2174.82 Aligned_cols=1428 Identities=33% Similarity=0.555 Sum_probs=1201.1
Q ss_pred ccCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCCCccccccccccccchhHHHHHHHHHHHHHHHHHHH
Q 000438 36 IFLSPCPQRALLSFVDLLFLLALIVFAVQKLYSKFTASGLSSSDISKPLIRNNRASVRTTLWFKLSLIVTALLALCFTVI 115 (1510)
Q Consensus 36 ~~~~~c~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1510)
.+++|||++++++++|..+++++.+..++... +. . .. ..+.++++..+..++..+.++.+..
T Consensus 21 ~d~t~~f~~~~~~~~p~~~~~~~~~~~~~~l~-~~-----~------~~------~~~~~~~~~~k~~~~~~~~~~~~~~ 82 (1522)
T TIGR00957 21 PDFTKCFQNTVLAWVPCFYLWVCFPCYFLYLS-RH-----D------RG------YIQMTHLNKTKTALGFLLWIVCWAD 82 (1522)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHHHHHhh-cc-----C------CC------cCCcchHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999996666543 11 0 00 1122333334444333333332211
Q ss_pred HHHHhccCCCCc-cchHHHHHHHHHHHHHHHHHHHHHHhhhcccccCchHHHHHHHHHHHHHHHHhhHHHHHHhhhhhhh
Q 000438 116 CILTFSGSTQWP-WKLVDALFWLVHAITHAVIAILIVHEKKFEAVTHPLSLRIYWVANFIIVSLFTTSGIIRLVSFETAQ 194 (1510)
Q Consensus 116 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (1510)
....++...... ..+..+..+++..++|++++++...+++ ++.+.|..+.+||++.++|.++.+++........
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~-~~~~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~---- 157 (1522)
T TIGR00957 83 LFYSFWERSHGRAPAPVFLVSPTLLGITMLLATFLIQLERR-KGVQSSGIMLTFWLVALVCALAILRSKILLALKE---- 157 (1522)
T ss_pred HHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHh-cccCCCcchhHHHHHHHHHHHHHHHHHHHHhhcc----
Confidence 122222221111 1234455667788888777666656554 3467789999999999999888777543221100
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHcccCcccCCCCCCCCcccccccccccCCCCCCCCCccCchhHHHHHHhHHHHH
Q 000438 195 FCSLKLDDIVSIVSFPLLTVLLFIAIRGSTGIAVNSDSEPGMDEKTKLYEPLLSKSDVVSGFASASILSKAFWIWMNPLL 274 (1510)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~s~~~f~W~~~l~ 274 (1510)
.... .......+...+.+....+...... . +. |.+.++ ....+.+||++||++||++|||+||++
T Consensus 158 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~-~~~~~~--~~~~~~~~e~~a~~~s~~~f~W~~pl~ 222 (1522)
T TIGR00957 158 --DAIV-DPFRDTTFYIYFALVLSQLVLSCFS-----D----KS-PLFSET--NHDPNPCPESSASFLSRITFWWITGMA 222 (1522)
T ss_pred --cccc-cceehhhHHHHHHHHHHHHHHHhhc-----C----CC-Cccccc--cccCCCCCcccCCHHHHHHHHHhHHHH
Confidence 0000 0000111111111111111111000 0 11 333210 112346899999999999999999999
Q ss_pred HccccCCCCCCCCCCCChhchHHHHHHHHhhcCCCCC-----------------------------------------CC
Q 000438 275 SKGYKSPLKIDEIPSLSPQHRAERMSELFESKWPKPH-----------------------------------------EK 313 (1510)
Q Consensus 275 ~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~-----------------------------------------~~ 313 (1510)
++|||++|+.+|||+++++++++.+.++|++.|+++. +.
T Consensus 223 ~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (1522)
T TIGR00957 223 VYGYRQPLEESDLWSLNKEDTSEMVVPVLVENWKKECKKTRKQPVSAVYGKKDPSKPKGSSQLDANEEVEALIVKSPHKP 302 (1522)
T ss_pred HHHhcCCCChhhccCCCHhHhHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999997531 11
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 314 CKHPVRTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNS 393 (1510)
Q Consensus 314 ~~~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~ 393 (1510)
++++|+++++++||+.++..++++++.+++.+++|++++.+|+|+++++.+.+.||+++++++++.++++++.++|+|..
T Consensus 303 ~~~sl~~~l~~~~~~~~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (1522)
T TIGR00957 303 RKPSLFKVLYKTFGPYFLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHIC 382 (1522)
T ss_pred CCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34789999999999999999999999999999999999999999977655566799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 394 QKLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVIT 473 (1510)
Q Consensus 394 ~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~ 473 (1510)
.++|+++|++|++.||+|+|+++...++++++|+++|+|++|++|+.++..++|.+|..|+++++++++||..+|+++++
T Consensus 383 ~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~ 462 (1522)
T TIGR00957 383 FVSGMRIKTAVMGAVYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLNLGPSVLA 462 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCChhhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 474 TVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISG 553 (1510)
Q Consensus 474 gl~~~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~ 553 (1510)
|++++++++|++.+++++++++++++|+.+|+|++.++|+|+|||+||+|+||+.|.+++++.|++|++..++..+....
T Consensus 463 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~ 542 (1522)
T TIGR00957 463 GVAVMVLMVPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAV 542 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh--cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccc
Q 000438 554 NIIVMWSTPVLISTLTFATALLF--GVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNE 631 (1510)
Q Consensus 554 ~~~~~~~~p~~v~~~tF~~~~l~--~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~ 631 (1510)
..+.+...|+++.+++|++|.+. ++.|+++.+|+++++|++++.|+..+|..+..+.++++|++||++||+.+|.++.
T Consensus 543 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~ 622 (1522)
T TIGR00957 543 GTFTWVCTPFLVALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPD 622 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 87878889999999999999876 4679999999999999999999999999999999999999999999987765433
Q ss_pred cccccCC-CCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCeE
Q 000438 632 SVERVEG-CDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGTT 710 (1510)
Q Consensus 632 ~~~~~~~-~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~i 710 (1510)
..+.... ......|+++|++|+|+++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|++
T Consensus 623 ~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~i 701 (1522)
T TIGR00957 623 SIERRTIKPGEGNSITVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKGSV 701 (1522)
T ss_pred cccccccCCCCCCcEEEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECCEE
Confidence 2111111 1112379999999999742 3579999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000438 711 AYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1510)
Q Consensus 711 ayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i 790 (1510)
|||+|+||++++||+|||.||.++++++|++++++|++.+|++.+|.||+|.+|++|.+|||||||||+||||+|++||+
T Consensus 702 ~yv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~i 781 (1522)
T TIGR00957 702 AYVPQQAWIQNDSLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADI 781 (1522)
T ss_pred EEEcCCccccCCcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCccCCCChhHHHHHHHHHHh--hhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHHH
Q 000438 791 YLLDDVFSAVDAHTGSDIFKECVR--GALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVAA 868 (1510)
Q Consensus 791 ~lLDep~salD~~~~~~i~~~~~~--~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~ 868 (1510)
||||||||+||+++++++++.++. +.++++|+|+|||++++++.||+|++|++|++++.|+++++.+.++.|.++...
T Consensus 782 llLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~~ 861 (1522)
T TIGR00957 782 YLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRDGAFAEFLRT 861 (1522)
T ss_pred EEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcchhHHHHHHh
Confidence 999999999999999999998874 466789999999999999999999999999999999999999888888887764
Q ss_pred hhhhhhhhhcccc------CCCCCC---CC--------CCCCCCc---cccccccc-cC---CccccccccccCCchhhh
Q 000438 869 HETSMELVEVGKT------MPSGNS---PK--------TPKSPQI---TSNLQEAN-GE---NKSVEQSNSDKGNSKLIK 924 (1510)
Q Consensus 869 ~~~~~~~~~~~~~------~~~~~~---~~--------~~~~~~~---~~~~~~~~-~~---~~~~~~~~~~~~~~~l~~ 924 (1510)
+....+.....+. .++.+. .. ....... ........ .. ....+....++...++.+
T Consensus 862 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1522)
T TIGR00957 862 YAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLME 941 (1522)
T ss_pred hccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhHH
Confidence 3221110000000 000000 00 0000000 00000000 00 000000001111234567
Q ss_pred HHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCC--CCCCCchHHHHHHHHHHHHHHH
Q 000438 925 EEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH--SMSFNPSLFIGVYGSTAVLSMV 1002 (1510)
Q Consensus 925 ~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~--~~~~~~~~~~~vy~~l~~~~~~ 1002 (1510)
+|+++.|.+++++|+.|+++.+ +..+++++++.++.+++..++++|+++|++... .+..+...|+++|++++++..+
T Consensus 942 ~e~~~~g~v~~~~y~~Y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~ 1020 (1522)
T TIGR00957 942 ADKAQTGQVELSVYWDYMKAIG-LFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGF 1020 (1522)
T ss_pred HHHHhcCcccHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHHH
Confidence 7888999999999999999864 444555566667778889999999999986421 1122345678899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000438 1003 ILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIIT 1082 (1510)
Q Consensus 1003 ~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~ 1082 (1510)
+.+++.++....+.++++++|++++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+++.++++
T Consensus 1021 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~ 1100 (1522)
T TIGR00957 1021 AVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVI 1100 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhh
Q 000438 1083 CQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRM 1162 (1510)
Q Consensus 1083 ~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~ 1162 (1510)
++.+|+++++++|+++++++++++|.+++|+++|++..+++|+++|+.|+++|+.|||+|+++++|.+++.+.+|.++++
T Consensus 1101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~ 1180 (1522)
T TIGR00957 1101 LLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKA 1180 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh
Q 000438 1163 DFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQF 1242 (1510)
Q Consensus 1163 ~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~ 1242 (1510)
.+.....++|++.++++++.+++.++..+.+ ...+.+++|.+|++++|++.+...+.++++.++++|+.++|+||+.+|
T Consensus 1181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~ 1259 (1522)
T TIGR00957 1181 YYPSIVANRWLAVRLECVGNCIVLFAALFAV-ISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEY 1259 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998776555544443 335678999999999999999999999999999999999999999999
Q ss_pred hcCcccccccccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCC
Q 000438 1243 TEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS 1322 (1510)
Q Consensus 1243 ~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~ 1322 (1510)
.+.|+|.+...+...+++.||.+|.|+|+||+|+|+++.++|||||||+|+||||||||||||||||||+++|+|+++|+
T Consensus 1260 ~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~ 1339 (1522)
T TIGR00957 1260 SETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESA 1339 (1522)
T ss_pred hcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCC
Confidence 99888765333344566789999999999999999987778999999999999999999999999999999999999999
Q ss_pred CcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCC
Q 000438 1323 GGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSG 1402 (1510)
Q Consensus 1323 ~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1402 (1510)
+|+|+|||+||+++++++||++|++|||||+||+||||+||||+++++|+|||+||++|+++++|.++|+||||+|+|+|
T Consensus 1340 ~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G 1419 (1522)
T TIGR00957 1340 EGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGG 1419 (1522)
T ss_pred CCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEE
Q 000438 1403 DNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKE 1482 (1510)
Q Consensus 1403 ~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE 1482 (1510)
.|||||||||+||||||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++|+++||||+|||+|+|+|
T Consensus 1420 ~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE 1499 (1522)
T TIGR00957 1420 ENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAE 1499 (1522)
T ss_pred CcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhHHhcCCcHHHHHHHHHh
Q 000438 1483 FGKPSRLLERPSLFGALVQEYA 1504 (1510)
Q Consensus 1483 ~gsp~~Ll~~~~~f~~lv~~~~ 1504 (1510)
+|+|++|++++|.|++|+++.+
T Consensus 1500 ~G~~~eLl~~~~~f~~l~~~~g 1521 (1522)
T TIGR00957 1500 FGAPSNLLQQRGIFYSMAKDAG 1521 (1522)
T ss_pred ECCHHHHHhCCCHHHHHHHHcC
Confidence 9999999999999999999853
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1e-201 Score=2051.80 Aligned_cols=1244 Identities=29% Similarity=0.486 Sum_probs=1095.8
Q ss_pred CCCCccCchhHHHHHHhHHHHHHccccCCCCCCCCCCCChhchHHHHHHHHhhcCCCCC--CCCCCchHHHHHHHHHHHH
Q 000438 253 VSGFASASILSKAFWIWMNPLLSKGYKSPLKIDEIPSLSPQHRAERMSELFESKWPKPH--EKCKHPVRTTLLRCFWKEV 330 (1510)
Q Consensus 253 ~~p~~~a~~~s~~~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~--~~~~~~l~~al~~~~~~~~ 330 (1510)
.+||++||+|||++|||++|++++|||++|+.+|||+|+++++++.+.++|++.|+++. +.++++|+++++++||+.+
T Consensus 3 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~L~~~l~~~~~~~~ 82 (1490)
T TIGR01271 3 RSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELASAKKNPKLLNALRRCFFWRF 82 (1490)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999998643 2456899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 331 AFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSS-FYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITSLY 409 (1510)
Q Consensus 331 ~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~-~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR~~L~~~Iy 409 (1510)
++.++++++.+++.+++|++++.+|+|++.++.. .+.||+++++++++.++++++.++++|...++++++|++|+..||
T Consensus 83 ~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy 162 (1490)
T TIGR01271 83 VFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIY 162 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999643322 457899999999999999999999999999999999999999999
Q ss_pred HHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 410 RKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVITTVVGIIGVMIFVVMGT 489 (1510)
Q Consensus 410 ~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~~l~~~~~~~~~ 489 (1510)
+|+|+++..+.++.++|+++|+|++|++++.+++.++|.+|..|+++++++++||.++|+++++|++++++++|++.+++
T Consensus 163 ~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~ 242 (1490)
T TIGR01271 163 KKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLG 242 (1490)
T ss_pred HHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 490 KRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWSTPVLISTLT 569 (1510)
Q Consensus 490 ~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~~~~p~~v~~~t 569 (1510)
+++.++|+++|+.+|+|++.++|+|+|||+||+|+||+.|.++|+++|++|++.+++..++.+...++++..|.++++++
T Consensus 243 ~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (1490)
T TIGR01271 243 QKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVFLS 322 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888888889999999999
Q ss_pred HHHHHHhcCccCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccccCccccccccCCCCCCccEEEe
Q 000438 570 FATALLFGVPLDAGSVFTTTTIFKILQEPIR-NFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEVR 648 (1510)
Q Consensus 570 F~~~~l~~~~Lta~~vFt~lalf~iL~~pl~-~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~ 648 (1510)
|++|.+.++ ++++++||++++|++|+.|+. .+|..+..+.++.+|++||++||..+|.++... ......++++
T Consensus 323 f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~-----~~~~~~i~~~ 396 (1490)
T TIGR01271 323 VVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEY-----NLTTTEVEMV 396 (1490)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc-----cCCCCceEEe
Confidence 999988754 789999999999999999985 799999999999999999999999887643211 0122469999
Q ss_pred eeEEEccCC-------------------------------CCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCc
Q 000438 649 DGVFSWDDE-------------------------------NGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEM 697 (1510)
Q Consensus 649 ~~~f~~~~~-------------------------------~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~ 697 (1510)
|++|+|+.. ..+++|+|+||+|++|++++|+|||||||||||++|+|++
T Consensus 397 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~~ 476 (1490)
T TIGR01271 397 NVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGEL 476 (1490)
T ss_pred cceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 999999531 0136899999999999999999999999999999999999
Q ss_pred ccCCcEEEECCeEEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHH
Q 000438 698 HKISGKVKVCGTTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQR 777 (1510)
Q Consensus 698 ~~~~G~i~~~g~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 777 (1510)
+|++|+|.++|++|||+|+||++++||+|||+||.++++++|++++++|++.+|++.+|.||+|.+|++|.+||||||||
T Consensus 477 ~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkqR 556 (1490)
T TIGR01271 477 EPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRAR 556 (1490)
T ss_pred CCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHHHH
Confidence 99999999999999999999999999999999999998899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHh
Q 000438 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 778 v~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|+||||+|++||+|||||||||||+++++++++.|+...++|+|+|+|||+++.++.||+|++|++|++++.|+++++.+
T Consensus 557 i~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l~~ 636 (1490)
T TIGR01271 557 ISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSELQA 636 (1490)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999988877778999999999999999999999999999999999999987
Q ss_pred cCcchHHHHHHhhhhhh------------h-----hh-cc-----c-c------CCCCC-CC------------------
Q 000438 858 SGMDFGALVAAHETSME------------L-----VE-VG-----K-T------MPSGN-SP------------------ 888 (1510)
Q Consensus 858 ~~~~f~~l~~~~~~~~~------------~-----~~-~~-----~-~------~~~~~-~~------------------ 888 (1510)
.+..|...........+ . .+ .. . . .+... ..
T Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (1490)
T TIGR01271 637 KRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASARKFS 716 (1490)
T ss_pred cChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 76666655531100000 0 00 00 0 0 00000 00
Q ss_pred -------C----CCC--CCCc------------------c-ccc--------------------cc---cccCC------
Q 000438 889 -------K----TPK--SPQI------------------T-SNL--------------------QE---ANGEN------ 907 (1510)
Q Consensus 889 -------~----~~~--~~~~------------------~-~~~--------------------~~---~~~~~------ 907 (1510)
. ..+ .... + ... .. .....
T Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1490)
T TIGR01271 717 FVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQTSF 796 (1490)
T ss_pred cccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccc
Confidence 0 000 0000 0 000 00 00000
Q ss_pred -------------cccc------ccc----------cccCCchhhhHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHH
Q 000438 908 -------------KSVE------QSN----------SDKGNSKLIKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLS 958 (1510)
Q Consensus 908 -------------~~~~------~~~----------~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~ 958 (1510)
...+ ..+ .+.....+.++|+++.|.++|++|+.|+++.++++.+++++++.
T Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~~~~~~~~~~~~ 876 (1490)
T TIGR01271 797 RKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNRNLVFVLIFCLVI 876 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 0000 000 00001234667888999999999999999876656556666667
Q ss_pred HHHHHHhhhhhhhhhhccccC------CCC-C-----------C-CchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 959 VAWQGSLMAGDYWLSYETSED------HSM-S-----------F-NPSLF-IGVYGSTAVLSMVILVVRAYFVTHVGLKT 1018 (1510)
Q Consensus 959 ~~~~~~~~~~~~wl~~~~~~~------~~~-~-----------~-~~~~~-~~vy~~l~~~~~~~~~~~~~~~~~~~~~~ 1018 (1510)
++.+++..+.++|+.+|.+.. ... . . ...+| +++|++++++..++.+++.+++.+.+.++
T Consensus 877 ~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (1490)
T TIGR01271 877 FLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTLLTV 956 (1490)
T ss_pred HHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999998886421 000 0 0 11223 45566666666778888999999999999
Q ss_pred HHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000438 1019 AQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAW 1098 (1510)
Q Consensus 1019 s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~ 1098 (1510)
++.+|++++++++++|++|||++|+|+|+|||++|++.+|..+|..+..++..++.+++.++++++.+|+++++++|+++
T Consensus 957 ~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~~~l~~ 1036 (1490)
T TIGR01271 957 SKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAAIPVAV 1036 (1490)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888899988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHH
Q 000438 1099 ANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLE 1178 (1510)
Q Consensus 1099 ~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~ 1178 (1510)
++++++++|.+++|++++++..+++|+++||.|+++|+.|||+|+++++|.+++.+.+|.+++..+.....++|+..+++
T Consensus 1037 ~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~ 1116 (1490)
T TIGR01271 1037 IFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMRID 1116 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCccccccccc----
Q 000438 1179 LLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKME---- 1254 (1510)
Q Consensus 1179 ~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~---- 1254 (1510)
+++.+.+..++++.+. ...+++|.+|++++|++.+...+.++++.+.++|+.+.|+||+.+|.+.|+|.+...+
T Consensus 1117 ~i~~~~~~~~~~l~~~--~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~~~ 1194 (1490)
T TIGR01271 1117 IIFVFFFIAVTFIAIG--TNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGGGK 1194 (1490)
T ss_pred HHHHHHHHHHHHHHHH--HhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccc
Confidence 9877654443333332 2345778899999999999999999999999999999999999999998887542111
Q ss_pred ----------CCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCc
Q 000438 1255 ----------DRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGG 1324 (1510)
Q Consensus 1255 ----------~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G 1324 (1510)
...+|+.||..|.|+|+||+++|+++.++||+|+||+|+||||||||||||||||||+++|+|+++ .+|
T Consensus 1195 ~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G 1273 (1490)
T TIGR01271 1195 YQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TEG 1273 (1490)
T ss_pred cccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCc
Confidence 123456799999999999999999887889999999999999999999999999999999999998 799
Q ss_pred EEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCC
Q 000438 1325 RIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN 1404 (1510)
Q Consensus 1325 ~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1404 (1510)
+|+|||+||++++++++|++|++|||||+||+||||+||||+++++|+|||+||++++|+++|.++|+||||+|+|+|.|
T Consensus 1274 ~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~n 1353 (1490)
T TIGR01271 1274 EIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYV 1353 (1490)
T ss_pred EEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccccccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEec
Q 000438 1405 WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1405 LS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~g 1484 (1510)
|||||||||||||||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++|+++||||+||++|+|+|+|
T Consensus 1354 LSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g 1433 (1490)
T TIGR01271 1354 LSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGSSVKQYD 1433 (1490)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHhcCCcHHHHHHHHHhh
Q 000438 1485 KPSRLLERPSLFGALVQEYAN 1505 (1510)
Q Consensus 1485 sp~~Ll~~~~~f~~lv~~~~~ 1505 (1510)
+|++|++++|.|++|++++..
T Consensus 1434 ~p~~Ll~~~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1434 SIQKLLNETSLFKQAMSAADR 1454 (1490)
T ss_pred CHHHHHcCCcHHHHHHHHhCh
Confidence 999999877999999998764
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.1e-192 Score=1961.91 Aligned_cols=1253 Identities=30% Similarity=0.490 Sum_probs=1087.6
Q ss_pred CCCCCCccCchhHHHHHHhHHHHHHccccCCCCCCCCCCCChhchHHHHHHHHh----------hcCCCCC---------
Q 000438 251 DVVSGFASASILSKAFWIWMNPLLSKGYKSPLKIDEIPSLSPQHRAERMSELFE----------SKWPKPH--------- 311 (1510)
Q Consensus 251 ~~~~p~~~a~~~s~~~f~W~~~l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~----------~~w~~~~--------- 311 (1510)
..+.||++||||.++++.|++|++.+..|..|+.+|+|+-..+.++-++..++. +.|+...
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (1560)
T PTZ00243 57 YTPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLD 136 (1560)
T ss_pred CCCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeecc
Confidence 456899999999999999999999999999999999999999988865554433 2454210
Q ss_pred ------------------------------------------------------C-------------------------
Q 000438 312 ------------------------------------------------------E------------------------- 312 (1510)
Q Consensus 312 ------------------------------------------------------~------------------------- 312 (1510)
+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (1560)
T PTZ00243 137 ASSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSS 216 (1560)
T ss_pred ccccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeecc
Confidence 0
Q ss_pred ------------CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHH
Q 000438 313 ------------KCKHPVRTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKF 380 (1510)
Q Consensus 313 ------------~~~~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~ 380 (1510)
.+..+|+++++++||+.++..++++++.+++.+++|++|+.+++|+++++.....|++++++++++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~ 296 (1560)
T PTZ00243 217 TGSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQL 296 (1560)
T ss_pred cccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHH
Confidence 01237999999999999999999999999999999999999999997665433468899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhc--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 381 VEVFSTHQFNFNSQKLGMLIRCTLITSLYRKGLRLSCSARQ--AHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISV 458 (1510)
Q Consensus 381 ~~~l~~~~~~~~~~~~g~riR~~L~~~Iy~K~L~ls~~~~~--~~~~G~ivNlms~D~~ri~~~~~~~~~~w~~plqi~l 458 (1510)
+++++.++|+|...++|+++|++|.+.||+|+|+++..+.+ +.++|+++|+|++|++++.+++.++|.+|.+|+++++
T Consensus 297 ~~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~ 376 (1560)
T PTZ00243 297 IQSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLL 376 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987765 5689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHH
Q 000438 459 ALILLYNCLGASVITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRE 538 (1510)
Q Consensus 459 al~lL~~~lG~s~l~gl~~~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~ 538 (1510)
++++||..+|+++++|++++++++|++.++++++.++++++|+.+|+|++.++|+++|||+||+||||+.|.++|++.|+
T Consensus 377 ~~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~ 456 (1560)
T PTZ00243 377 SILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRA 456 (1560)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 539 SEFGWLTKFMYSISGNIIVMWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLAR 618 (1510)
Q Consensus 539 ~El~~l~~~~~~~a~~~~~~~~~p~~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~R 618 (1510)
+|++.+++..+..++..++++++|.++++++|++|++.|++||++++|+++++|++++.|+.++|..++.+.++++|++|
T Consensus 457 ~El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~R 536 (1560)
T PTZ00243 457 RELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKR 536 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCccccc----cc-----------------------------cC-------------------------CCC
Q 000438 619 LDKYMLSRELVNESV----ER-----------------------------VE-------------------------GCD 640 (1510)
Q Consensus 619 I~~fL~~~e~~~~~~----~~-----------------------------~~-------------------------~~~ 640 (1510)
|++||..+|.+.+.. +. .+ ...
T Consensus 537 I~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (1560)
T PTZ00243 537 ISTFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRH 616 (1560)
T ss_pred HHHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccc
Confidence 999998776321000 00 00 000
Q ss_pred CCccEEEeeeEEEccCC-------------------------------------CCccccceeeEEEeCCcEEEEEcCCC
Q 000438 641 DNIAVEVRDGVFSWDDE-------------------------------------NGEECLKNINLEIKKGDLTAIVGTVG 683 (1510)
Q Consensus 641 ~~~~i~~~~~~f~~~~~-------------------------------------~~~~~L~~i~l~i~~G~~~~ivG~~G 683 (1510)
....+.++|++|+|+.. .++++|+|+||+|++|++++|+|+||
T Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nG 696 (1560)
T PTZ00243 617 PSPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATG 696 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCC
Confidence 11245666766665310 12468999999999999999999999
Q ss_pred CChHHHHHHHhcCcccCCcEEEECCeEEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccc
Q 000438 684 SGKSSLLASILGEMHKISGKVKVCGTTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEI 763 (1510)
Q Consensus 684 sGKSTLl~~llG~~~~~~G~i~~~g~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~i 763 (1510)
|||||||++|+|+++|++|+|.+++++|||+|+||++++||+|||.|+.++++++|++++++|++++|++.+|.|++|.+
T Consensus 697 sGKSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i 776 (1560)
T PTZ00243 697 SGKSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEI 776 (1560)
T ss_pred CcHHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHh
Confidence 99999999999999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred cCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeC
Q 000438 764 GERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMRE 843 (1510)
Q Consensus 764 g~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~ 843 (1510)
|++|.+|||||||||+||||+|++|++||||||||+||++++++++++++.+.++|+|+|+|||+++.++.||+|++|++
T Consensus 777 ~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~ 856 (1560)
T PTZ00243 777 GEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGD 856 (1560)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999999888766789999999999999999999999999
Q ss_pred CEEEEecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCC-ccccccccccCCchh
Q 000438 844 GMIVQSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGEN-KSVEQSNSDKGNSKL 922 (1510)
Q Consensus 844 G~i~~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l 922 (1510)
|++.+.|+++++++.+ .+..+........+..+.....+......................+. ...+....+....++
T Consensus 857 G~i~~~G~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 935 (1560)
T PTZ00243 857 GRVEFSGSSADFMRTS-LYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGRL 935 (1560)
T ss_pred CEEEEecCHHHHHhCh-HHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence 9999999999998753 46555443211100000000000000000000000000000000000 000000111123456
Q ss_pred hhHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHH
Q 000438 923 IKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMV 1002 (1510)
Q Consensus 923 ~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~ 1002 (1510)
.++|+++.|.++|++|+.|++..+++..+++++++.++.+++..++++|+++|++.. ...+...|+++|+++.++..+
T Consensus 936 ~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~--~~~~~~~~l~~y~~~~~~~~~ 1013 (1560)
T PTZ00243 936 MTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRS--FKLSAATYLYVYLGIVLLGTF 1013 (1560)
T ss_pred hhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--cCCCcccHHHHHHHHHHHHHH
Confidence 777888999999999999999887666655666666777888899999999998642 123345688899998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000438 1003 ILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIIT 1082 (1510)
Q Consensus 1003 ~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~ 1082 (1510)
+.+++.+.....+.++++.+|++++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+++.++++
T Consensus 1014 ~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~ 1093 (1560)
T PTZ00243 1014 SVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVT 1093 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhh
Q 000438 1083 CQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRM 1162 (1510)
Q Consensus 1083 ~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~ 1162 (1510)
++..|.++++++|++++++.+.++|.+..|+++|++..+++|++++++|+++|+.|||+|+.++.|.+++.+..|.+.+.
T Consensus 1094 ~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~ 1173 (1560)
T PTZ00243 1094 SASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSC 1173 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 98888888888888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhHhhHHHHHHHHHHHHHHHHHHHHHH---HhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000438 1163 DFHNNGSNEWLGFRLELLGSFTFCLATLFMI---LLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERI 1239 (1510)
Q Consensus 1163 ~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v---~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi 1239 (1510)
.+.....++|++.++++++++++++++++.+ ....+.+++|.+|++++|+.++...+.++++.+.++|+.|.|+||+
T Consensus 1174 ~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi 1253 (1560)
T PTZ00243 1174 SYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERL 1253 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998876554444432 2233456789999999999999999999999999999999999999
Q ss_pred HHhhc-Ccccccccc-----------------------cCCCCC---CCCCCCceEEEEEEEEEecCCCCcceeeeeEEE
Q 000438 1240 KQFTE-IPSEAAWKM-----------------------EDRLPP---PNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSI 1292 (1510)
Q Consensus 1240 ~~~~~-~~~E~~~~~-----------------------~~~~~~---~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I 1292 (1510)
.+|.+ .|+|+.... +...++ +.||..|.|+|+||+|+|+++.++||+||||+|
T Consensus 1254 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vsf~I 1333 (1560)
T PTZ00243 1254 LYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVSFRI 1333 (1560)
T ss_pred HHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecceEEE
Confidence 99986 444321100 011122 235677999999999999988788999999999
Q ss_pred eCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCCCCCHH
Q 000438 1293 HGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDE 1372 (1510)
Q Consensus 1293 ~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~ 1372 (1510)
+||||||||||||||||||+++|+|+++|++|+|+|||+||+++++++||++|++|||||+||+||||+||||+++++|+
T Consensus 1334 ~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sde 1413 (1560)
T PTZ00243 1334 APREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSA 1413 (1560)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccC-CCEEEEeCCCCCCCHHhHHHHHHHHHHHc
Q 000438 1373 EIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKH-SRLLFMDEATASVDSQTDAEIQRIIREEF 1451 (1510)
Q Consensus 1373 eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~-~kILiLDEaTsslD~~Td~~Iq~~I~~~f 1451 (1510)
|||+||++|+++++|.++|+||||.|+|+|.|||||||||||||||||++ |+|||||||||+||++||+.||++|++.|
T Consensus 1414 eI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~ 1493 (1560)
T PTZ00243 1414 EVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF 1493 (1560)
T ss_pred HHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999996 89999999999999999999999999999
Q ss_pred CCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcC-CcHHHHHHHHHhhh
Q 000438 1452 AACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLER-PSLFGALVQEYANR 1506 (1510)
Q Consensus 1452 ~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~-~~~f~~lv~~~~~~ 1506 (1510)
++||||+||||++|+++||||+|||+|+|+|+|+|+||+++ +|.|++|+++.+..
T Consensus 1494 ~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~~~ 1549 (1560)
T PTZ00243 1494 SAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALGRS 1549 (1560)
T ss_pred CCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChh
Confidence 99999999999999999999999999999999999999987 49999999987653
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-144 Score=1368.04 Aligned_cols=1091 Identities=22% Similarity=0.288 Sum_probs=823.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Q 000438 384 FSTHQFNFNSQKLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-----QLHAVWLMPLQISV 458 (1510)
Q Consensus 384 l~~~~~~~~~~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-----~~~~~w~~plqi~l 458 (1510)
+....|.+.+.|...|+|.....++.|+-.. ..+.++.|++++-|+.|+++|++++. ++|.+-....-+++
T Consensus 90 ~q~~c~~~~geRq~~riR~~yl~~iLrQdi~----~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii 165 (1228)
T KOG0055|consen 90 IQVSCWMRTGERQTARIRSKYLKAILRQDIG----WFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVI 165 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccc----eeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445678888999999999888887765543 44455669999999999999999874 45555444444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHH
Q 000438 459 ALILLYNCLGASVITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRE 538 (1510)
Q Consensus 459 al~lL~~~lG~s~l~gl~~~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~ 538 (1510)
+++.-|+ -+++++.+..++.......++.+.+...+..++--+--.+..|.+.+||++-.++-|+...+|-.+.
T Consensus 166 ~F~~~W~----Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~-- 239 (1228)
T KOG0055|consen 166 GFYYGWK----LTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKA-- 239 (1228)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHH--
Confidence 5544443 3555666666666666777777777777777777777889999999999999999999877765443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 539 SEFGWLTKFMYSISGNIIVMWSTP------VLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQA 612 (1510)
Q Consensus 539 ~El~~l~~~~~~~a~~~~~~~~~p------~~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a 612 (1510)
++..+|+....++...+..... .....++||..++..+..+++++|+++...-+-...|.+..+.++.+.+|
T Consensus 240 --L~~~~k~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a 317 (1228)
T KOG0055|consen 240 --LENALKFGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKA 317 (1228)
T ss_pred --HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhcc
Confidence 3333333333322222111111 22234566666666678999999998855555556678888899999999
Q ss_pred HHHHHHHHHHhcccc-CccccccccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHH
Q 000438 613 MISLARLDKYMLSRE-LVNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLA 691 (1510)
Q Consensus 613 ~vS~~RI~~fL~~~e-~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~ 691 (1510)
+++..+|.+-++..+ .++...........++.|+++|+.|+||..++.++|+|+||+|++|+.+|+||++||||||+++
T Consensus 318 ~~aa~~I~~~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~ 397 (1228)
T KOG0055|consen 318 RAAAYRIFETIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQ 397 (1228)
T ss_pred ccchHHHHHHhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHH
Confidence 999999999997643 3333211212233567899999999999888889999999999999999999999999999999
Q ss_pred HHhcCcccCCcEEEECC-------------eEEEEcCCCcCCCccHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhccc
Q 000438 692 SILGEMHKISGKVKVCG-------------TTAYVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEY 757 (1510)
Q Consensus 692 ~llG~~~~~~G~i~~~g-------------~iayv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~ 757 (1510)
.|.|.++|++|+|.++| ++|.|.|+|.+|+.||+|||.||.|. ..+...++.+.....+.+..+|.
T Consensus 398 LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~ 477 (1228)
T KOG0055|consen 398 LLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPD 477 (1228)
T ss_pred HHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHH
Confidence 99999999999999998 48999999999999999999999874 34455555555667778889999
Q ss_pred CCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCE
Q 000438 758 GDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDL 837 (1510)
Q Consensus 758 gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~ 837 (1510)
|++|.+||+|.+|||||||||||||||.+||+||||||||||||++.++.+ +++++.+.+|+|.|+|+|+++.+++||+
T Consensus 478 g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~V-q~ALd~~~~grTTivVaHRLStIrnaD~ 556 (1228)
T KOG0055|consen 478 GYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVV-QEALDKASKGRTTIVVAHRLSTIRNADK 556 (1228)
T ss_pred hhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHH-HHHHHHhhcCCeEEEEeeehhhhhccCE
Confidence 999999999999999999999999999999999999999999999986655 6788888899999999999999999999
Q ss_pred EEEEeCCEEEEecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCC-CCCCCCCCC-CccccccccccCCcccccccc
Q 000438 838 ILVMREGMIVQSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSG-NSPKTPKSP-QITSNLQEANGENKSVEQSNS 915 (1510)
Q Consensus 838 i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 915 (1510)
|++|++|+|+|.|+++||++.++.|.++++.++......+.+.+.+.. ........+ ...+...............+.
T Consensus 557 I~v~~~G~IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~~~~~~~ 636 (1228)
T KOG0055|consen 557 IAVMEEGKIVEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLLSVKPEG 636 (1228)
T ss_pred EEEEECCEEEEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCccccccccccccc
Confidence 999999999999999999999999999998875433221100000000 000000000 000000000000000000000
Q ss_pred ccCCchhhhHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhh-----hccccCCCCCCCchHHH
Q 000438 916 DKGNSKLIKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLS-----YETSEDHSMSFNPSLFI 990 (1510)
Q Consensus 916 ~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~-----~~~~~~~~~~~~~~~~~ 990 (1510)
++..... .+++ -.+++....+|.+. .|+.+++..++.++.....-.-.+-++ +...+..........|.
T Consensus 637 e~~~~~~-~~~~---~~~s~~~i~k~~~p--e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~a 710 (1228)
T KOG0055|consen 637 EDPEEPV-SEED---EKVSFWRIFKLNKP--EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWA 710 (1228)
T ss_pred ccccccc-cccc---ccccHHHHHHhccc--hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHH
Confidence 0000001 1111 22333333333332 344444333333332222111111111 11111011111233588
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc--ccchhHHHHHhhhHhHhhhhhHHHHHHH
Q 000438 991 GVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDT--TPSGRILSRASTDQTNIDLFLPFFVGIT 1068 (1510)
Q Consensus 991 ~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~--~p~G~ilnR~s~D~~~id~~l~~~~~~~ 1068 (1510)
.+|+++++...++.++..+++...|.+..+++|..+|+++++++++|||. +. |+|.+|+++|...+...+...+..+
T Consensus 711 l~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~v 789 (1228)
T KOG0055|consen 711 LIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLV 789 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999996 45 9999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHH---HHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCc
Q 000438 1069 VAMYITLLGIFIITCQYAWPTIFLV---IPLAWANYWYRGYYLST-SRELTRLDSITKAPVIHHFSESISGVMTIRAFGK 1144 (1510)
Q Consensus 1069 ~~~~~~~~~~~~v~~~~~~~~~~~~---ipl~~~~~~~~~~y~~~-~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~ 1144 (1510)
++.+..++..+++.++++|.+.+++ .|++++..+.+.+++.. +++.+. ..........|++.+++||++|+.
T Consensus 790 v~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~----~~~ea~~iA~eai~NIrTV~al~~ 865 (1228)
T KOG0055|consen 790 VQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKK----AYEEASKIAIEAVSNIRTVAALCA 865 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH----HHHHHHHHHHHHHHhHHHHHHHhh
Confidence 9999999999999999999987654 66666666666555543 333322 222334577899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHHH----HHHhccCccChhHHHHHHHHHHHHHHHHH
Q 000438 1145 QTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLF----MILLPSSIIKPENVGLSLSYGLSLNGVLF 1220 (1510)
Q Consensus 1145 ~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~----~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~ 1220 (1510)
|++|++.+.+.++...+..+... .|-++...+-..++++.-++. ..+...+.+++..+-..+.-...-...+.
T Consensus 866 e~~~~~~y~~~l~~p~~~~~~~~---~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~ 942 (1228)
T KOG0055|consen 866 EEKFMELYKEELEKPRKSSFKRG---LISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALG 942 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888777654432 355555554444444333322 23344566666544332222111122334
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEEEEEEecCCC-CcceeeeeEEEeCCcEEE
Q 000438 1221 WAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNT-PLVLKGITLSIHGGEKIG 1299 (1510)
Q Consensus 1221 ~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~-~~vLk~is~~I~~Gekvg 1299 (1510)
.......+.-+...|+.++.+..+.+++-+...+... ..-+.+|+|+|+||+|+||... .+||+|+|++|++||++|
T Consensus 943 ~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~--~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvA 1020 (1228)
T KOG0055|consen 943 QASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGG--KLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVA 1020 (1228)
T ss_pred HHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCC--ccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEE
Confidence 4555666778888999999999887663321111111 1113689999999999997442 369999999999999999
Q ss_pred EECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCC-CCCCHHHHHHHH
Q 000438 1300 VVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSL 1378 (1510)
Q Consensus 1300 IVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL 1378 (1510)
+||+|||||||++.+|.|+|+|.+|.|.|||.||+++++++||++|++|.|||+||++||||||... .+.+.+||.+|+
T Consensus 1021 LVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aa 1100 (1228)
T KOG0055|consen 1021 LVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAA 1100 (1228)
T ss_pred EECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999876 357999999999
Q ss_pred HHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEE
Q 000438 1379 ERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIIS 1458 (1510)
Q Consensus 1379 ~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~ 1458 (1510)
+.++.++||.++|+||||.|||.|.+||||||||||||||++||||||+||||||+||.++|+.+|++|++...++|+|+
T Consensus 1101 k~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~Iv 1180 (1228)
T KOG0055|consen 1101 KLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIV 1180 (1228)
T ss_pred HHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHHHHH
Q 000438 1459 IAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEY 1503 (1510)
Q Consensus 1459 IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~~~ 1503 (1510)
|||||+||++||.|.|+++|+|+|.|+|++|++++|.|++|++..
T Consensus 1181 IAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~~~G~Y~~Lv~~q 1225 (1228)
T KOG0055|consen 1181 IAHRLSTIQNADVIAVLKNGKVVEQGTHDELLAKRGIYFRLVQLQ 1225 (1228)
T ss_pred EecchhhhhcCCEEEEEECCEEEecccHHHHHhCCCchHHHhhhc
Confidence 999999999999999999999999999999999889999999854
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.1e-133 Score=1363.25 Aligned_cols=1178 Identities=18% Similarity=0.197 Sum_probs=848.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 319 RTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGM 398 (1510)
Q Consensus 319 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~ 398 (1510)
++...+.+++.++++.++.++..++..+.|+++..+++-+...+. -..++..+++..++..++...+.+...+++.
T Consensus 51 ~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 126 (1466)
T PTZ00265 51 FKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGEN----VNDIIFSLVLIGIFQFILSFISSFCMDVVTT 126 (1466)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334567777888888888888888899999999986532211 1122333444444455555555666778888
Q ss_pred HHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 399 LIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVG 477 (1510)
Q Consensus 399 riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~ 477 (1510)
++...+...+|+|.++++....+..+.|++.|.++.|++.+.+++. .+..+....+.++.++++++..-..-+++.+++
T Consensus 127 ~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l~~ 206 (1466)
T PTZ00265 127 KILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLCITCV 206 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 8888888899999999998888888899999999999999988763 455555555556666555543222233344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 478 IIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIV 557 (1510)
Q Consensus 478 ~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~ 557 (1510)
+.+++.+..++.++.++..++..+..++..+.+.|.++|||+||.|+-|+.+.++..+..+.-.+...+.....+....+
T Consensus 207 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~ 286 (1466)
T PTZ00265 207 FPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIGM 286 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555667778888888888888899999999999999999999999998888765444333333333333332222
Q ss_pred HHHHHH--HHHHHHHHHHHHhcC--------ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000438 558 MWSTPV--LISTLTFATALLFGV--------PLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRE 627 (1510)
Q Consensus 558 ~~~~p~--~v~~~tF~~~~l~~~--------~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e 627 (1510)
...... .+.+++|+.+....+ .++++.+++.+...-+...++..+...+..+.++++|.+||.+.++.++
T Consensus 287 ~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~ 366 (1466)
T PTZ00265 287 INGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRKP 366 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 222111 223445676665542 5788888876544444445555666678899999999999999998654
Q ss_pred CccccccccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEEC
Q 000438 628 LVNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVC 707 (1510)
Q Consensus 628 ~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~ 707 (1510)
..++........ ....|+++|++|+|+..++.++|+|+||+|++||++||+||||||||||+++|+|.++|++|+|.++
T Consensus 367 ~~~~~~~~~~~~-~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~ 445 (1466)
T PTZ00265 367 LVENNDDGKKLK-DIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIIN 445 (1466)
T ss_pred CCCCCCCCccCC-CCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEe
Confidence 322111111111 1236999999999975444579999999999999999999999999999999999999999999994
Q ss_pred -C-------------eEEEEcCCCcCCCccHHHHHhcCCCC---------------------------------------
Q 000438 708 -G-------------TTAYVAQTSWIQNGTIEENILFGLPM--------------------------------------- 734 (1510)
Q Consensus 708 -g-------------~iayv~Q~~~i~~~Tv~enI~fg~~~--------------------------------------- 734 (1510)
| .+|||+|+|.++++||+|||.+|.+.
T Consensus 446 ~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (1466)
T PTZ00265 446 DSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDM 525 (1466)
T ss_pred CCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhc
Confidence 3 27999999999999999999998521
Q ss_pred -------------------ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeC
Q 000438 735 -------------------NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDD 795 (1510)
Q Consensus 735 -------------------~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDe 795 (1510)
+.+...++++.+++.+.+..+|.|.+|.+|++|.+|||||||||+||||++++|+|+||||
T Consensus 526 ~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDE 605 (1466)
T PTZ00265 526 SNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDE 605 (1466)
T ss_pred ccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 1123445556677888889999999999999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCC------------------------------
Q 000438 796 VFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREG------------------------------ 844 (1510)
Q Consensus 796 p~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G------------------------------ 844 (1510)
|||+||+++++.+.+.+.+... +|+|+|+|||+++.+..||+|++|++|
T Consensus 606 pTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (1466)
T PTZ00265 606 ATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKDD 685 (1466)
T ss_pred cccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccccccccccccccccccc
Confidence 9999999999988765544433 589999999999999899999999986
Q ss_pred -----------------EEEEecChHHHHh-cCcchHHHHHHhhhhhhhhhcc--ccCCC--CCCCCCCC-C--CCccc-
Q 000438 845 -----------------MIVQSGRYNALLN-SGMDFGALVAAHETSMELVEVG--KTMPS--GNSPKTPK-S--PQITS- 898 (1510)
Q Consensus 845 -----------------~i~~~g~~~~l~~-~~~~f~~l~~~~~~~~~~~~~~--~~~~~--~~~~~~~~-~--~~~~~- 898 (1510)
+|+++|+++|+++ .++.|..+++.+.......... +.... ....+... . .....
T Consensus 686 ~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (1466)
T PTZ00265 686 NNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYKDSERGYDPDEMNG 765 (1466)
T ss_pred ccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccccccccccccccccccc
Confidence 5999999999998 6889999987653221110000 00000 00000000 0 00000
Q ss_pred c--ccccccC-Ccccccc-c--ccc-CCchhhhHHHH----hcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhh
Q 000438 899 N--LQEANGE-NKSVEQS-N--SDK-GNSKLIKEEER----ETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMA 967 (1510)
Q Consensus 899 ~--~~~~~~~-~~~~~~~-~--~~~-~~~~l~~~e~~----~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~ 967 (1510)
. .+..... .+..... . .+. ...+....++. ......+..+++++...... +++.+++.++..++...
T Consensus 766 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 843 (1466)
T PTZ00265 766 NSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKD--VTIIALSILVAGGLYPV 843 (1466)
T ss_pred cccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 0 0000000 0000000 0 000 00000000000 00111222333343322222 12222222333333333
Q ss_pred hhhhhhhccccCCC---CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc--cc
Q 000438 968 GDYWLSYETSEDHS---MSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDT--TP 1042 (1510)
Q Consensus 968 ~~~wl~~~~~~~~~---~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~--~p 1042 (1510)
.++.++.+.+.... .......+..++++++++..++.+++.++....+.+...+++.++++++++.|++|||+ ++
T Consensus 844 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~ 923 (1466)
T PTZ00265 844 FALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHA 923 (1466)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCC
Confidence 33333333221000 01112346667777888888899999999999999999999999999999999999986 88
Q ss_pred chhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH---
Q 000438 1043 SGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLS--TSRELTRL--- 1117 (1510)
Q Consensus 1043 ~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~--~~r~l~rl--- 1117 (1510)
+|++++|+++|++.+...+...+..++..++.+++.++++++.+|.+.++++|++++.........+ ..++.++.
T Consensus 924 ~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1003 (1466)
T PTZ00265 924 PGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARLTANKDVEKKEIN 1003 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999998888888888888999998899999998877666554333222111111 11121111
Q ss_pred ----------HHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHH
Q 000438 1118 ----------DSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCL 1187 (1510)
Q Consensus 1118 ----------~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~ 1187 (1510)
+....+.....+.|+++|++|||+|+.|+++.+++.+..+...+..........++....+++..+..++
T Consensus 1004 ~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1083 (1466)
T PTZ00265 1004 QPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSF 1083 (1466)
T ss_pred ccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1223455678999999999999999999999999988888776655544433333333333333333222
Q ss_pred HHHH-HHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCC-CCCCCCC
Q 000438 1188 ATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLP-PPNWPAH 1265 (1510)
Q Consensus 1188 ~~~~-~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~-~~~wp~~ 1265 (1510)
+.++ ..++..+.++.|.+...+.+.+.....+..+...+.+++....+.+|+.++++.+++.+.......+ +...+..
T Consensus 1084 ~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~ 1163 (1466)
T PTZ00265 1084 AYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIK 1163 (1466)
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCC
Confidence 2222 3334567788776655554444333445666777888999999999999999876543211111110 0012346
Q ss_pred ceEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----------------------
Q 000438 1266 GNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP----------------------- 1321 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep----------------------- 1321 (1510)
|.|+|+||+|+|+.+ ..+||+|+||+|+|||++||||+||||||||+++|.|+|+|
T Consensus 1164 g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~ 1243 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQ 1243 (1466)
T ss_pred ceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccccccccccccc
Confidence 899999999999743 23699999999999999999999999999999999999999
Q ss_pred -------------------------------CCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCC-CCC
Q 000438 1322 -------------------------------SGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQY 1369 (1510)
Q Consensus 1322 -------------------------------~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~ 1369 (1510)
++|+|+|||+||+++++++||++|+||||||+||+|||||||... +++
T Consensus 1244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~a 1323 (1466)
T PTZ00265 1244 GDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDA 1323 (1466)
T ss_pred cccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCC
Confidence 699999999999999999999999999999999999999999876 468
Q ss_pred CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHH
Q 000438 1370 SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 1449 (1510)
Q Consensus 1370 sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~ 1449 (1510)
+|+||++|++.+++++||.++|+||||.|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|+++|++
T Consensus 1324 t~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~ 1403 (1466)
T PTZ00265 1324 TREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVD 1403 (1466)
T ss_pred CHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred Hc--CCceEEEEecChhhhhhcCEEEEEeC----CEE-EEecChhHHhcC-CcHHHHHHHHH
Q 000438 1450 EF--AACTIISIAHRIPTVMDCDRVIVVDA----GWA-KEFGKPSRLLER-PSLFGALVQEY 1503 (1510)
Q Consensus 1450 ~f--~~~TvI~IAHRl~ti~~~DrIlVL~~----G~i-vE~gsp~~Ll~~-~~~f~~lv~~~ 1503 (1510)
.. +++|+|+||||++++++||+|+||++ |++ +|.|+|+||+++ +|.|++|++..
T Consensus 1404 ~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1404 IKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred HhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 74 68999999999999999999999999 995 599999999984 79999999753
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7e-90 Score=830.33 Aligned_cols=565 Identities=22% Similarity=0.328 Sum_probs=476.4
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccC---CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSED---HSMSFNPSLFIGVYGSTAVLSMVILVVRAYFV 1011 (1510)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~---~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~ 1011 (1510)
+...+.|.+... +.+...+++.++.....++.++++...+|.. .+..........+..++.++++++.++|.+++
T Consensus 135 ~~rl~~l~~~~~--~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~ 212 (716)
T KOG0058|consen 135 LKRLLGLLKPEW--KWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLL 212 (716)
T ss_pred HHHHHHHhchhH--HHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556665432 2233333333444555666666665433321 11111223456677788889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000438 1012 THVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIF 1091 (1510)
Q Consensus 1012 ~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 1091 (1510)
.+.+.+...+++..+|++++|+.++|||.+.+|++++|+++|...+-..++..+...+.+.++.++.+++|+..+|.+..
T Consensus 213 ~~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltl 292 (716)
T KOG0058|consen 213 QYAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTL 292 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhh
Q 000438 1092 LVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNE 1171 (1510)
Q Consensus 1092 ~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1171 (1510)
+.+..+++...+.++|-+..|++.+..+++-+...+...|.+++++|+|+|+.|++-.++|.+.++.-.+.......+.-
T Consensus 293 v~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~ 372 (716)
T KOG0058|consen 293 VTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYG 372 (716)
T ss_pred HHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 66555555555666666666777777777888888999999999999999999998888888887776655544333333
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCccccc
Q 000438 1172 WLGFRLELLGSFTFCLATL-FMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAA 1250 (1510)
Q Consensus 1172 wl~~~l~~l~~~~~~~~~~-~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~ 1250 (1510)
-+....++.++.....+.. ...++..+.+++|.+--.+.|...+...+.++...+.++.+...|.+|+.||++.+|.-+
T Consensus 373 ~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~ 452 (716)
T KOG0058|consen 373 IFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIP 452 (716)
T ss_pred HhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCC
Confidence 3333344444443333332 244556788999999999999999999999999999999999999999999999776544
Q ss_pred ccccCCCCCCCCCCCceEEEEEEEEEecCCC-CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEc
Q 000438 1251 WKMEDRLPPPNWPAHGNVDLIDLQVRYRSNT-PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIID 1329 (1510)
Q Consensus 1251 ~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~-~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~ID 1329 (1510)
.. ....| . ..+|.|+|+||+|.||.+. .+||||+||+|+|||+||+||||||||||++++|.|+|+|++|+|++|
T Consensus 453 ~~--G~~~p-~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllD 528 (716)
T KOG0058|consen 453 LT--GTLAP-D-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLD 528 (716)
T ss_pred CC--Ccccc-c-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEEC
Confidence 32 11122 2 4689999999999998652 369999999999999999999999999999999999999999999999
Q ss_pred CeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChh
Q 000438 1330 GIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVG 1408 (1510)
Q Consensus 1330 G~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1408 (1510)
|+||++++.+.||++||+|.|||+||+|||||||... .+.+||||.+|+++++.++||.++|+||||.|||.|..||||
T Consensus 529 G~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGG 608 (716)
T KOG0058|consen 529 GVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGG 608 (716)
T ss_pred CeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccch
Confidence 9999999999999999999999999999999999753 378999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhH
Q 000438 1409 QRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSR 1488 (1510)
Q Consensus 1409 QrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~ 1488 (1510)
|||||||||||+|||+|||||||||+||.++|..||++|.+..+++|||+|||||+||+.+|+|+|+++|+|+|.|+|+|
T Consensus 609 QKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~e 688 (716)
T KOG0058|consen 609 QKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDE 688 (716)
T ss_pred HHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCC-cHHHHHHHHHhh
Q 000438 1489 LLERP-SLFGALVQEYAN 1505 (1510)
Q Consensus 1489 Ll~~~-~~f~~lv~~~~~ 1505 (1510)
|++++ |.|++|+++...
T Consensus 689 Ll~~~~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 689 LLSKPNGLYAKLVQRQLD 706 (716)
T ss_pred HhhCcccHHHHHHHHhcc
Confidence 99999 999999997654
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4e-83 Score=806.95 Aligned_cols=563 Identities=26% Similarity=0.368 Sum_probs=490.9
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFNP-SLFIGVYGSTAVLSMVILVVRAYFVT 1012 (1510)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~~-~~~~~vy~~l~~~~~~~~~~~~~~~~ 1012 (1510)
+..++.++.. -+....-+++.+++.+++.+++++......|... ....+. .....++++.++...++.++|.+++.
T Consensus 142 ~~~f~~~~~~--~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~ 219 (709)
T COG2274 142 LSWFIPLLFK--YRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIA 219 (709)
T ss_pred hHhHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444432 2334455677778889999999999888776521 112222 22344566677888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000438 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1510)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1092 (1510)
+.+.+....+-.++++++++.|++||.++++|++++|++ |++.|..++...+...+...+..+..+++|++++|+++++
T Consensus 220 ~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li 298 (709)
T COG2274 220 HLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLI 298 (709)
T ss_pred HHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999996 7778877877777777777777778888999999998877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhH
Q 000438 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1510)
Q Consensus 1093 ~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1510)
.+..++++..+.....+..|+..+......+...++..|++.|+.|||+.+.|++|..++.+..+++.+..+.......|
T Consensus 299 ~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~ 378 (709)
T COG2274 299 VLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALI 378 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 76666666666555666666666666667777889999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccc
Q 000438 1173 LGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1510)
Q Consensus 1173 l~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~ 1251 (1510)
......++..+....+.++ +..+..+.++.|.+-...+..-.+++++..++..+.+++....+.+|+.+..+.|+|.+.
T Consensus 379 ~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~ 458 (709)
T COG2274 379 LNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEG 458 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 8888888887766555554 344557788888877777788889999999999999999999999999999999998643
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCe
Q 000438 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI 1331 (1510)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1331 (1510)
+..+...|+.+|+|+|+||+|+|+++.|++|+|+|++|+|||+|||||+||||||||+++|.|+|+|++|+|++||+
T Consensus 459 ---~~~~~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~ 535 (709)
T COG2274 459 ---DKTLIHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGV 535 (709)
T ss_pred ---ccccccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 22234556778999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHHHhhcceEEecCccccCcccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1332 DISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1332 dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
|++++++++||++|++||||++||+|||||||...+ +.+|||+++|++.+|++++|.++|.||||+|+|+|.|||||||
T Consensus 536 dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQr 615 (709)
T COG2274 536 DLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQR 615 (709)
T ss_pred eHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHH
Confidence 999999999999999999999999999999998654 5789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHh
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|||+|||||++||+|||||||||+||++||+.|++.|.+...+||+|+||||++|+++||||+|||+|+|+|.|+|+||+
T Consensus 616 QrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell 695 (709)
T COG2274 616 QRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELL 695 (709)
T ss_pred HHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcHHHHHHHHH
Q 000438 1491 ERPSLFGALVQEY 1503 (1510)
Q Consensus 1491 ~~~~~f~~lv~~~ 1503 (1510)
+.+|.|+++++..
T Consensus 696 ~~~g~y~~l~~~q 708 (709)
T COG2274 696 AQGGLYARLYQQQ 708 (709)
T ss_pred HhcChHHHHHhcc
Confidence 9999999998753
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.6e-79 Score=782.18 Aligned_cols=546 Identities=27% Similarity=0.386 Sum_probs=450.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000438 953 AVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILH 1032 (1510)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~ 1032 (1510)
+.+++.++...+....++++....+...........+...++++.++..++.++..++..+.+.+....++.++++++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~ 97 (567)
T COG1132 18 LAILLLLLSALLSLLLPLLIGRIIDALLADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLR 97 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444455566666666666654432110011122344455555666777777778888888899999999999999999
Q ss_pred CCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1033 APMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSR 1112 (1510)
Q Consensus 1033 ~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r 1112 (1510)
.|++||+++++|++++|+++|++.++..+......+....+.+++.+++++..+|.+.++++...+++.....++.+..+
T Consensus 98 ~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~ 177 (567)
T COG1132 98 LPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSR 177 (567)
T ss_pred CCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998888666665778888888889999998777665555555555555555557
Q ss_pred HHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHHH-
Q 000438 1113 ELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLF- 1191 (1510)
Q Consensus 1113 ~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~- 1191 (1510)
...+......+.+.+.+.|+++|+++||+|+.++...+++.+..+...+...........+.....++..+........
T Consensus 178 ~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (567)
T COG1132 178 KLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALG 257 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777788999999999999999999999999776666666555555443333333333333333333332222222
Q ss_pred HHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEE
Q 000438 1192 MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLI 1271 (1510)
Q Consensus 1192 ~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~ 1271 (1510)
......+.++.|.+...+.|...+...+..+......++....|.||+.++.+.+++.... . . +..+..|+|+|+
T Consensus 258 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~---~-~-~~~~~~~~I~f~ 332 (567)
T COG1132 258 GFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDP---P-D-PLKDTIGSIEFE 332 (567)
T ss_pred HHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC---C-C-CCCCCCCeEEEE
Confidence 2233456688899999999999999999999999999999999999999999876542211 1 1 134566889999
Q ss_pred EEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCc
Q 000438 1272 DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQE 1351 (1510)
Q Consensus 1272 ~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQd 1351 (1510)
||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||+++++.+||++|++||||
T Consensus 333 ~vsf~y~~~-~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Qd 411 (567)
T COG1132 333 NVSFSYPGK-KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQD 411 (567)
T ss_pred EEEEEcCCC-CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEccc
Confidence 999999864 4599999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCcccHHHhcCCCCC-CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 000438 1352 PVLFEGTVRSNIDPIGQ-YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDE 1430 (1510)
Q Consensus 1352 p~LF~gTIR~NLdp~~~-~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDE 1430 (1510)
|.||+||||+||++..+ ++|||+++|+++++++|+|.++|+||||.|||+|.+||||||||+|||||++|+|+||||||
T Consensus 412 ~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILDE 491 (567)
T COG1132 412 PLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILDE 491 (567)
T ss_pred ceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEec
Confidence 99999999999998865 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHHHHHh
Q 000438 1431 ATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEYA 1504 (1510)
Q Consensus 1431 aTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~~~~ 1504 (1510)
|||++|++||+.||+++++..+++|+|+||||++|+++||+|+|||+|+|+|+|+|+||++++|.|++|+++..
T Consensus 492 aTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~~g~y~~l~~~~~ 565 (567)
T COG1132 492 ATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAKGGLYARLYQAQG 565 (567)
T ss_pred cccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHcCCHHHHHHHHhh
Confidence 99999999999999999988889999999999999999999999999999999999999999999999998764
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.7e-77 Score=767.74 Aligned_cols=562 Identities=18% Similarity=0.221 Sum_probs=445.6
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCC--CCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 936 HVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH--SMSFN-PSLFIGVYGSTAVLSMVILVVRAYFVT 1012 (1510)
Q Consensus 936 ~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~--~~~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~ 1012 (1510)
+.++.|++..+++ +.+.+++.++..++....++.+....+... ..... ...++.+++++.++..++.+++.++..
T Consensus 11 ~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK11174 11 RWLKQQSKPAKRW--LNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGF 88 (588)
T ss_pred HHHHHHhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566554332 233444455556666666666655444211 11111 122344455556667778888888999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000438 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1510)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1092 (1510)
..+.+....++.++++++++.|++||++.++|++++|+++|++.++..+...+..++..++.+++.+++++.++|.+.++
T Consensus 89 ~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 168 (588)
T PRK11174 89 KAGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLI 168 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988888888888888888888888899987765
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhH
Q 000438 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1510)
Q Consensus 1093 ~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1510)
++..+++..++...+.+..++..+......+.+.+++.|+++|+.+||+|++|+++.+++.+..++..+..........+
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (588)
T PRK11174 169 LLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFL 248 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444444444455555556666666667788899999999999999999999999998888877766665554444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCccChhHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhh
Q 000438 1173 LGFRLELLGSFTFCLATLFMILLPSSIIKPENV---------GLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFT 1243 (1510)
Q Consensus 1173 l~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~---------Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~ 1243 (1510)
......++..+...++.++......+.++.|.+ -.++.+...+..++..+...+..+.....+.+|+.++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l 328 (588)
T PRK11174 249 SSAVLEFFASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFL 328 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444443332222211111111244444432 11223445566777888888888999999999999999
Q ss_pred cCcccccccccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCC
Q 000438 1244 EIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSG 1323 (1510)
Q Consensus 1244 ~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~ 1323 (1510)
+.|++.+.. ...+ ...+..+.|+|+||+|.|.++ +++|+|+||+|+|||++||||+||||||||+++|.|++ |++
T Consensus 329 ~~~~~~~~~--~~~~-~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~ 403 (588)
T PRK11174 329 ETPLAHPQQ--GEKE-LASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQ 403 (588)
T ss_pred cCCCcccCC--Cccc-cCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCC
Confidence 876543211 1101 111234679999999988655 56999999999999999999999999999999999999 999
Q ss_pred cEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCC
Q 000438 1324 GRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSG 1402 (1510)
Q Consensus 1324 G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1402 (1510)
|+|++||+|+++++.+++|++|+||||||.||+|||||||... ++++|||+++|++.|+++++|+++|+||||.|||+|
T Consensus 404 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 404 GSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred cEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 9999999999999999999999999999999999999999876 469999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEE
Q 000438 1403 DNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKE 1482 (1510)
Q Consensus 1403 ~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE 1482 (1510)
.||||||||||+|||||+++|+|||||||||+||.+|++.|++.|++..+++|+|+||||++++.+||+|+||++|+++|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e 563 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQ 563 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEee
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred ecChhHHhcCCcHHHHHHHHHh
Q 000438 1483 FGKPSRLLERPSLFGALVQEYA 1504 (1510)
Q Consensus 1483 ~gsp~~Ll~~~~~f~~lv~~~~ 1504 (1510)
.|+|+||++++|.|++|++...
T Consensus 564 ~G~~~eL~~~~~~y~~l~~~q~ 585 (588)
T PRK11174 564 QGDYAELSQAGGLFATLLAHRQ 585 (588)
T ss_pred cCCHHHHHhcchHHHHHHHHhh
Confidence 9999999999999999997653
No 13
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.5e-77 Score=779.20 Aligned_cols=554 Identities=21% Similarity=0.285 Sum_probs=455.9
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 937 VYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFN-PSLFIGVYGSTAVLSMVILVVRAYFVTHV 1014 (1510)
Q Consensus 937 ~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~~~ 1014 (1510)
.+++|++.. +..+...+++.++..+..++.+++.....|... ..... ....+..++++.++..++..++.++....
T Consensus 151 ~l~~~~~~~--~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 228 (711)
T TIGR00958 151 RLLGLSGRD--WPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYT 228 (711)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555433 223344555566677777777887776554311 11111 11234455566667778888899999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000438 1015 GLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVI 1094 (1510)
Q Consensus 1015 ~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i 1094 (1510)
+.+...+++.++++++++.|++||++++.|+++||+++|++.++..+...+..++..++.+++.+++++..+|++.++++
T Consensus 229 ~~~~~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l 308 (711)
T TIGR00958 229 MARINLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTL 308 (711)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998876655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhH---hh
Q 000438 1095 PLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGS---NE 1171 (1510)
Q Consensus 1095 pl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~---~~ 1171 (1510)
..+++.+++.+.+.+..++..+......+...+++.|+++|+.+||+|+.|+++.+++.+..++..+........ ..
T Consensus 309 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (711)
T TIGR00958 309 INLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYL 388 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555555556655556666666667777889999999999999999999999988888887766654433322 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccc
Q 000438 1172 WLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1510)
Q Consensus 1172 wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~ 1251 (1510)
|....+..+..+++ ..+.......+.++.|.+...+.|...+...+..+...+.++++...+.+|+.++.+.+++.+.
T Consensus 389 ~~~~~~~~~~~~~i--l~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 466 (711)
T TIGR00958 389 WTTSVLGMLIQVLV--LYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPL 466 (711)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 33322222222211 1122233456789999998899999999999999999999999999999999999987665332
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcC
Q 000438 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDG 1330 (1510)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG 1330 (1510)
. . ....++..|.|+|+||+|+|+.+ .+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|++||
T Consensus 467 ~--~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg 542 (711)
T TIGR00958 467 T--G--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDG 542 (711)
T ss_pred C--C--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECC
Confidence 1 1 11123456889999999999753 35699999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCHHHhhcceEEecCccccCcccHHHhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhH
Q 000438 1331 IDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1331 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
+|+++++.+++|++|++|||||.+|+|||||||... ++.+|+++++|+++++++++++++|+||||.+||+|.+|||||
T Consensus 543 ~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQ 622 (711)
T TIGR00958 543 VPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQ 622 (711)
T ss_pred EEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHH
Confidence 999999999999999999999999999999999855 4688999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHH
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
|||+|||||++|+|+|||||||||+||++||+.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|+||
T Consensus 623 kQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL 700 (711)
T TIGR00958 623 KQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQL 700 (711)
T ss_pred HHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHH
Confidence 999999999999999999999999999999999999 344589999999999999999999999999999999999999
Q ss_pred hcCCcHHHHHH
Q 000438 1490 LERPSLFGALV 1500 (1510)
Q Consensus 1490 l~~~~~f~~lv 1500 (1510)
++++|.|++|+
T Consensus 701 ~~~~~~y~~lv 711 (711)
T TIGR00958 701 MEDQGCYKHLV 711 (711)
T ss_pred HhCCCchHhcC
Confidence 99999999875
No 14
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.3e-76 Score=771.01 Aligned_cols=544 Identities=21% Similarity=0.270 Sum_probs=453.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhccccCC-CCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 951 VVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFNP-SLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILR 1028 (1510)
Q Consensus 951 ~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~~-~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~ 1028 (1510)
+..++++.++..++.++.++.+....|... ...... ..+..+++++.++..++.+++.++....+.+....++.++++
T Consensus 138 ~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 217 (686)
T TIGR03797 138 LLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWD 217 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666667777777777765554311 111111 223445556667778888999999999999999999999999
Q ss_pred HHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1029 SILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYL 1108 (1510)
Q Consensus 1029 ~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~ 1108 (1510)
++++.|++||++.++|++++|+. |++.+...+...+...+...+.+++.+++++.++|++.++++..+++++.+..++.
T Consensus 218 ~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~ 296 (686)
T TIGR03797 218 RLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLG 296 (686)
T ss_pred HHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999997 78888888777666666666666777788888888877665554444444444444
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHH
Q 000438 1109 STSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLA 1188 (1510)
Q Consensus 1109 ~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~ 1188 (1510)
+..+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..+.......|......++..+...++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~i 376 (686)
T TIGR03797 297 LLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAAL 376 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444445556678899999999999999999999999999998888888877777777777666666554433333
Q ss_pred HHH-HHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCce
Q 000438 1189 TLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGN 1267 (1510)
Q Consensus 1189 ~~~-~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~ 1267 (1510)
.++ ......+.++.|.+-....+...+..++..+...+..+.....+.+|+.++.+.|+|.+.. ...+ .+..|.
T Consensus 377 l~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~---~~~~--~~~~~~ 451 (686)
T TIGR03797 377 FAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA---KTDP--GKLSGA 451 (686)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC---cCCC--CCCCce
Confidence 332 2334567788888878888888888999999999999999999999999999877664311 1111 234578
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++|++
T Consensus 452 I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~ 531 (686)
T TIGR03797 452 IEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGV 531 (686)
T ss_pred EEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEE
Confidence 99999999998766779999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000438 1348 IPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1510)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILi 1427 (1510)
|||||.+|+|||||||..++.++|+|+++|++.++++++++++|+|+||++||+|.|||||||||++|||||+++|+|||
T Consensus 532 v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLi 611 (686)
T TIGR03797 532 VLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILL 611 (686)
T ss_pred EccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999999999998876689999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHHHH
Q 000438 1428 MDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQE 1502 (1510)
Q Consensus 1428 LDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~~ 1502 (1510)
||||||+||++||+.|++.|++. ++|+|+||||++++.+||||+||++|+|+|.|+|++|++++|.|++|+++
T Consensus 612 LDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~~~~y~~l~~~ 684 (686)
T TIGR03797 612 FDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAREGLFAQLARR 684 (686)
T ss_pred EeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhCCcHHHHHHHh
Confidence 99999999999999999999985 68999999999999999999999999999999999999988999999875
No 15
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.1e-76 Score=772.50 Aligned_cols=561 Identities=22% Similarity=0.285 Sum_probs=464.5
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCC-CCCC-chHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHS-MSFN-PSLFIGVYGSTAVLSMVILVVRAYFVT 1012 (1510)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~-~~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~ 1012 (1510)
++.++.+++..++ ....++++.++.+++.++.++.+....|.... ...+ ...+...++++.++..++.+++.++..
T Consensus 142 ~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (710)
T TIGR03796 142 LRALWRRLRGSRG--ALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLR 219 (710)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566654332 23344455566666777777777665543111 1111 122344455566677888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000438 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1510)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1092 (1510)
..+.+....++.++++++++.|++||++.++|++++|++.| +.+...+...+...+..++.+++.+++++.++|++.++
T Consensus 220 ~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 298 (710)
T TIGR03796 220 RLQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLI 298 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 56777777777777777888888888888899988777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhH
Q 000438 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1510)
Q Consensus 1093 ~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1510)
++..++++.++..++.+..+...+......+...+++.|+++|+.+||+++.|+.+.+++.+..++..+..........|
T Consensus 299 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (710)
T TIGR03796 299 GIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQI 378 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666555655555565556667778899999999999999999999999999888877777766666666666
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccc
Q 000438 1173 LGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1510)
Q Consensus 1173 l~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~ 1251 (1510)
......++..+...++.++ ...+..+.++.|.+.....+...+...+..+...+..+.....+++|+.++.+.|+|.+.
T Consensus 379 ~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 458 (710)
T TIGR03796 379 LGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLL 458 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 6655555554433333222 333456788999888888888899999999999999999999999999999988776532
Q ss_pred cccC--C-CCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEE
Q 000438 1252 KMED--R-LPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIII 1328 (1510)
Q Consensus 1252 ~~~~--~-~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~I 1328 (1510)
.... . ...+.++..|.|+|+||+|+|+++.+++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|.+
T Consensus 459 ~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~i 538 (710)
T TIGR03796 459 EEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILF 538 (710)
T ss_pred ccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 1100 0 011113456899999999999876677999999999999999999999999999999999999999999999
Q ss_pred cCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCh
Q 000438 1329 DGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSV 1407 (1510)
Q Consensus 1329 DG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~ 1407 (1510)
||+|+++++.+++|++|+||||||.+|+|||||||..++ +++|+++++|++.+++++++.++|+||||.++|+|.||||
T Consensus 539 dg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSG 618 (710)
T TIGR03796 539 DGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSG 618 (710)
T ss_pred CCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCH
Confidence 999999999999999999999999999999999998764 6899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChh
Q 000438 1408 GQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPS 1487 (1510)
Q Consensus 1408 GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~ 1487 (1510)
||||||+|||||+++|+|||||||||+||++||+.|.+.|++ .++|+|+||||++++.+||||+||++|+|+|.|+|+
T Consensus 619 GQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~ 696 (710)
T TIGR03796 619 GQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHE 696 (710)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHH
Confidence 999999999999999999999999999999999999999987 689999999999999999999999999999999999
Q ss_pred HHhcCCcHHHHHH
Q 000438 1488 RLLERPSLFGALV 1500 (1510)
Q Consensus 1488 ~Ll~~~~~f~~lv 1500 (1510)
+|+++++.|++|+
T Consensus 697 ~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 697 ELWAVGGAYARLI 709 (710)
T ss_pred HHHHcCCcHHHHh
Confidence 9999999999987
No 16
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=8.3e-76 Score=752.33 Aligned_cols=547 Identities=24% Similarity=0.348 Sum_probs=444.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhccccCCC-CCCCchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 952 VAVLLLSVAWQGSLMAGDYWLSYETSEDHS-MSFNPSL---FIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQIL 1027 (1510)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~-~~~~~~~---~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll 1027 (1510)
...+++.++..++..+.++++....+.... ....... +..+++++.++..++.+++.++....+.+....++.+++
T Consensus 26 ~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~ 105 (592)
T PRK10790 26 GLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVM 105 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566677777777777766553111 1111111 122344445566677778888888999999999999999
Q ss_pred HHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000438 1028 RSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYY 1107 (1510)
Q Consensus 1028 ~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y 1107 (1510)
+++++.|+++|++.+.|++++|+++|++.++..+...+..++..++.+++.+++++..+|++.++++..+++...+...+
T Consensus 106 ~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~ 185 (592)
T PRK10790 106 DAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIY 185 (592)
T ss_pred HHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888888888888888888888888887654332222222222333
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHH-HHHHHHHHHHHHH
Q 000438 1108 LSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWL-GFRLELLGSFTFC 1186 (1510)
Q Consensus 1108 ~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl-~~~l~~l~~~~~~ 1186 (1510)
....+...+......+...+++.|+++|+.+||+|+.++++.+++.+..+...+..+.......+. .....++..+...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (592)
T PRK10790 186 QRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILC 265 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444566778899999999999999999999998888877776655544433333222 2223333322222
Q ss_pred HHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCc
Q 000438 1187 LATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHG 1266 (1510)
Q Consensus 1187 ~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g 1266 (1510)
+..+.......+.++.|.+...+.|...+..++..+...+..+++...+.+|+.++.+.+++.... ...++..+
T Consensus 266 ~~~~~~~~~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~------~~~~~~~~ 339 (592)
T PRK10790 266 GLLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGN------DDRPLQSG 339 (592)
T ss_pred HHHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCC------CccCCCCC
Confidence 211111123467788888888888999999999999999999999999999999998866542211 11123457
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++++++|++|+
T Consensus 340 ~i~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~ 418 (592)
T PRK10790 340 RIDIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVA 418 (592)
T ss_pred eEEEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheE
Confidence 89999999999854 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 000438 1347 IIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLL 1426 (1510)
Q Consensus 1347 iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kIL 1426 (1510)
||||||.+|+||||+||.++++++|+++++|++++|++++++++|+||||.++|+|.+||||||||++|||||+++|+||
T Consensus 419 ~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~il 498 (592)
T PRK10790 419 MVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQIL 498 (592)
T ss_pred EEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999988888999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHHHHHhh
Q 000438 1427 FMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEYAN 1505 (1510)
Q Consensus 1427 iLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~~~~~ 1505 (1510)
|||||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|++|+++++.|++|+++...
T Consensus 499 llDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~~~y~~l~~~~~~ 577 (592)
T PRK10790 499 ILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQGRYWQMYQLQLA 577 (592)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCHHHHHHHHHhh
Confidence 9999999999999999999999988899999999999999999999999999999999999999999999999987644
No 17
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=3.5e-76 Score=769.63 Aligned_cols=559 Identities=20% Similarity=0.255 Sum_probs=453.9
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCC-CCc-hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMS-FNP-SLFIGVYGSTAVLSMVILVVRAYFVT 1012 (1510)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~-~~~-~~~~~vy~~l~~~~~~~~~~~~~~~~ 1012 (1510)
+..++.|++..+. .+..++++.++..++.++.++++....|...... ... ..+...++++.++..++.+++.++..
T Consensus 144 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (708)
T TIGR01193 144 LLKFIPLITRQKK--LIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLN 221 (708)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666654433 2344455566677777888888877665321111 111 12233444555667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000438 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1510)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1092 (1510)
..+.+....++.++++++++.|++||+++++|++++|++ |.+.+...+...+...+...+.+++.+++++..+|++.++
T Consensus 222 ~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 300 (708)
T TIGR01193 222 VLGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLL 300 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999999999999999999998 7777766665555555555566666677778888887766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhH
Q 000438 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1510)
Q Consensus 1093 ~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1510)
++..++++..+...+.+..++..+......+...+++.|+++|+.|||+|+.|+++.+++.+..+...+..+.......+
T Consensus 301 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (708)
T TIGR01193 301 SLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQG 380 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555555555556666666666677788889999999999999999999999988888777766665554443333
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccc
Q 000438 1173 LGFRLELLGSFTFCLA-TLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1510)
Q Consensus 1173 l~~~l~~l~~~~~~~~-~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~ 1251 (1510)
......++..+...++ .+.......+.++.|.+-....+...+..++..+...+..++....+++|+.++.+.|+|.+.
T Consensus 381 ~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~ 460 (708)
T TIGR01193 381 QQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFIN 460 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 3333333322222211 222233457889999888888888899999999999999999999999999999988876532
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCe
Q 000438 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI 1331 (1510)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1331 (1510)
.. .....++..|.|+|+||+|+|+++ +++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|+|||+
T Consensus 461 ~~---~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~ 536 (708)
T TIGR01193 461 KK---KRTELNNLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGF 536 (708)
T ss_pred cc---cccCCCCCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCE
Confidence 11 111234456899999999999754 46999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHHHhhcceEEecCccccCcccHHHhcCCC--CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhH
Q 000438 1332 DISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI--GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1332 dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~--~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
|+++++++++|++|+||||||.||+|||||||... .+++|+++++|++.+++++++.++|+||||.|+|+|.+|||||
T Consensus 537 ~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQ 616 (708)
T TIGR01193 537 SLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQ 616 (708)
T ss_pred EHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHH
Confidence 99999999999999999999999999999999875 4689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHH
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
||||+||||++++|+|||||||||+||++||+.|++.|++. +++|+|+||||++++..||+|+||++|+++|.|+|++|
T Consensus 617 rQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L 695 (708)
T TIGR01193 617 KQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDEL 695 (708)
T ss_pred HHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999974 78999999999999999999999999999999999999
Q ss_pred hcCCcHHHHHHH
Q 000438 1490 LERPSLFGALVQ 1501 (1510)
Q Consensus 1490 l~~~~~f~~lv~ 1501 (1510)
++++|.|++|++
T Consensus 696 ~~~~~~y~~l~~ 707 (708)
T TIGR01193 696 LDRNGFYASLIH 707 (708)
T ss_pred HhcCCcHHHHhh
Confidence 999999999975
No 18
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.5e-74 Score=740.25 Aligned_cols=543 Identities=21% Similarity=0.274 Sum_probs=454.7
Q ss_pred HHHHHHHHHhhhhhhhhhhccccCCCCCCC-ch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000438 956 LLSVAWQGSLMAGDYWLSYETSEDHSMSFN-PS-LFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHA 1033 (1510)
Q Consensus 956 ~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~-~~-~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~ 1033 (1510)
++.++.........++++...+........ .. .+...++++.++..++.+++.++....+.+....++..+++++++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 111 (582)
T PRK11176 32 VALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGM 111 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 344444445455566665444321111111 11 1222234456667777788888888899999999999999999999
Q ss_pred CccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1034 PMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRE 1113 (1510)
Q Consensus 1034 p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~ 1113 (1510)
|.++|++...|++++|+++|++.+...+...+..++...+.+++.+++++..+|++.++++..+++..++..+..+..++
T Consensus 112 ~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~ 191 (582)
T PRK11176 112 PVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRN 191 (582)
T ss_pred CHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888888888888888888888888889887766555555544444455555555
Q ss_pred HHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHHH-H
Q 000438 1114 LTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLF-M 1192 (1510)
Q Consensus 1114 l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~ 1192 (1510)
..+......+...+++.|.++|+.+||+|+.++++.+++.+..+...+..........|.....+++..+...++..+ .
T Consensus 192 ~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~ 271 (582)
T PRK11176 192 ISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAAS 271 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555555667788899999999999999999999999999988888887777766666666666666655444333332 3
Q ss_pred HHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEE
Q 000438 1193 ILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLID 1272 (1510)
Q Consensus 1193 v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~ 1272 (1510)
.....+.++.|.+.+.+++...+...+..+...+..++....+.+|+.++.+.++|.+.. .. ...|..+.|+|+|
T Consensus 272 ~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~---~~--~~~~~~~~i~~~~ 346 (582)
T PRK11176 272 FPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEG---KR--VIERAKGDIEFRN 346 (582)
T ss_pred HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCC---Cc--CCCCCCCeEEEEE
Confidence 334467899999998999999999999999999999999999999999998876553211 11 1123456899999
Q ss_pred EEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCcc
Q 000438 1273 LQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEP 1352 (1510)
Q Consensus 1273 vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp 1352 (1510)
|+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|++||+|+++++.+++|++|+||||||
T Consensus 347 vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~ 426 (582)
T PRK11176 347 VTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNV 426 (582)
T ss_pred EEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCc
Confidence 99999876667999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccHHHhcCCC--CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 000438 1353 VLFEGTVRSNIDPI--GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDE 1430 (1510)
Q Consensus 1353 ~LF~gTIR~NLdp~--~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDE 1430 (1510)
.+|+||||+||... ++++|+|++++++.++++++++++|+||||.+||+|.+|||||||||+|||||+++|+||||||
T Consensus 427 ~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDE 506 (582)
T PRK11176 427 HLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDE 506 (582)
T ss_pred eeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEEC
Confidence 99999999999854 3489999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHHHHH
Q 000438 1431 ATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEY 1503 (1510)
Q Consensus 1431 aTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~~~ 1503 (1510)
|||+||++|++.|.+.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++++.|++|+++.
T Consensus 507 ptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~~~y~~l~~~~ 579 (582)
T PRK11176 507 ATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQNGVYAQLHKMQ 579 (582)
T ss_pred ccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCCChHHHHHHHH
Confidence 9999999999999999999888999999999999999999999999999999999999999999999999864
No 19
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.5e-74 Score=733.24 Aligned_cols=558 Identities=19% Similarity=0.220 Sum_probs=443.4
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CCCC---CchH--HHHHHHHHHHHHHHHHHHHHHHH
Q 000438 938 YKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSF---NPSL--FIGVYGSTAVLSMVILVVRAYFV 1011 (1510)
Q Consensus 938 y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~---~~~~--~~~vy~~l~~~~~~~~~~~~~~~ 1011 (1510)
+++|++...++ +.+.+++.++..++.++.++.+.+..+... .... .... ....+.+++++..++.++..++.
T Consensus 7 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (574)
T PRK11160 7 FLKLYKRHWFM--LSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVS 84 (574)
T ss_pred HHHHHhhhhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555543322 233344445555555666655555444210 1100 0011 12234445566677778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000438 1012 THVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIF 1091 (1510)
Q Consensus 1012 ~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 1091 (1510)
...+.+....++.++++++++.|+.||++.++|++++|+++|++.++..+...+..++...+.+++.+++++..+|++.+
T Consensus 85 ~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 164 (574)
T PRK11160 85 HDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLAL 164 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999888888888888888899999999998876
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHh
Q 000438 1092 LVIPLAWA-NYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSN 1170 (1510)
Q Consensus 1092 ~~ipl~~~-~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~ 1170 (1510)
+++..+++ ...+..++.+..+...+......+.+.+.+.|+++|+.+||+|+.|+++.+++.+..++..+.........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (574)
T PRK11160 165 TLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLT 244 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55333322 22233444455555555566677888899999999999999999999999998888888777766666555
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccc
Q 000438 1171 EWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYG-LSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEA 1249 (1510)
Q Consensus 1171 ~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~-l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~ 1249 (1510)
.+.....+++..+...++..+......+.++.|..-..+.|. +.....+..+...+..+.....+.+|+.++.+.|+|.
T Consensus 245 ~~~~~~~~~~~~~~~~~i~~~g~~~~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~ 324 (574)
T PRK11160 245 GLSQALMILANGLTVVLMLWLAAGGVGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEV 324 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 555555555554433333332222224556666544444443 3233455556667778888899999999999876653
Q ss_pred cccccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEc
Q 000438 1250 AWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIID 1329 (1510)
Q Consensus 1250 ~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~ID 1329 (1510)
+.. ...++ .+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|++|
T Consensus 325 ~~~--~~~~~--~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~ 400 (574)
T PRK11160 325 TFP--TTSTA--AADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLN 400 (574)
T ss_pred CCC--cccCC--CCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEC
Confidence 211 01111 13457899999999998655569999999999999999999999999999999999999999999999
Q ss_pred CeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChh
Q 000438 1330 GIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVG 1408 (1510)
Q Consensus 1330 G~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1408 (1510)
|+|+++++.+++|++|++|||||.+|+|||||||.... +.+|+++++|++++++++++++ |+||||.+||+|.+||||
T Consensus 401 g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgG 479 (574)
T PRK11160 401 GQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGG 479 (574)
T ss_pred CEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHH
Confidence 99999999999999999999999999999999997643 6899999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhH
Q 000438 1409 QRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSR 1488 (1510)
Q Consensus 1409 QrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~ 1488 (1510)
||||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|++|++|+++|.|+|+|
T Consensus 480 qrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~ 559 (574)
T PRK11160 480 EQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQE 559 (574)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HhcCCcHHHHHHHH
Q 000438 1489 LLERPSLFGALVQE 1502 (1510)
Q Consensus 1489 Ll~~~~~f~~lv~~ 1502 (1510)
|++++|.|++|++.
T Consensus 560 l~~~~g~y~~l~~~ 573 (574)
T PRK11160 560 LLAQQGRYYQLKQR 573 (574)
T ss_pred HHhcCcHHHHHHhh
Confidence 99999999999863
No 20
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3e-74 Score=749.87 Aligned_cols=551 Identities=20% Similarity=0.279 Sum_probs=448.7
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFNP-SLFIGVYGSTAVLSMVILVVRAYFVT 1012 (1510)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~~-~~~~~vy~~l~~~~~~~~~~~~~~~~ 1012 (1510)
+..++.+++...+ .+..++++.++.+++..+.++.+....|... ...... ..+..+++++.++..++.+++.++..
T Consensus 135 ~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (694)
T TIGR03375 135 KHWFWSTLKESWP--LYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLD 212 (694)
T ss_pred chHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555554322 2334455556666777777777766554311 111111 12233344455667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000438 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1510)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 1092 (1510)
..+.+....++.++++++++.|++| ++.++|++++|+ +|++.+...+...+...+..++.++..++++++++|++.++
T Consensus 213 ~~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 290 (694)
T TIGR03375 213 VAGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999998 789999999999 79999998887776666666666667777788888887666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhH
Q 000438 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1510)
Q Consensus 1093 ~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1510)
.+..+++++.+..++.+..++..+......+...+++.|+++|+.+||+|+.|+.+.+++.+..++..+..+.......+
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444444445555555555555666667788899999999999999999999999999888888777666665555555
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccc
Q 000438 1173 LGFRLELLGSFTFCLATL-FMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1510)
Q Consensus 1173 l~~~l~~l~~~~~~~~~~-~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~ 1251 (1510)
......++..+...+..+ ....+..+.++.|.+-..++|...+...+..+...+..++....+++|+.++.+.|+|.+.
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 444444444332222222 2233446788999888888888899999999999999999999999999999988776432
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCe
Q 000438 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI 1331 (1510)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1331 (1510)
. .......+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+
T Consensus 451 ~---~~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~ 527 (694)
T TIGR03375 451 G---TRFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGV 527 (694)
T ss_pred C---CCCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 1 1111112345789999999999866667999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHHHhhcceEEecCccccCcccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1332 DISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1332 dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
|+++++++++|+++++|||||.+|+|||||||...+ +++|+|+++|++.+++++++.++|+||||.++|+|.|||||||
T Consensus 528 ~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQr 607 (694)
T TIGR03375 528 DIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQR 607 (694)
T ss_pred EhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHH
Confidence 999999999999999999999999999999998765 4899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHh
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++..||||+||++|+++|.|+|+||+
T Consensus 608 QRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl 687 (694)
T TIGR03375 608 QAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVL 687 (694)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999998
Q ss_pred cC
Q 000438 1491 ER 1492 (1510)
Q Consensus 1491 ~~ 1492 (1510)
++
T Consensus 688 ~~ 689 (694)
T TIGR03375 688 EA 689 (694)
T ss_pred HH
Confidence 75
No 21
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.8e-76 Score=745.21 Aligned_cols=514 Identities=24% Similarity=0.327 Sum_probs=425.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHH
Q 000438 986 PSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFV 1065 (1510)
Q Consensus 986 ~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~ 1065 (1510)
...+...|..++++..+..++...++.+.+.|...+++++.+++++|++++|||++..|.+..|++.|++.+++.+...+
T Consensus 70 ~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKv 149 (1228)
T KOG0055|consen 70 VSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKV 149 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHH
Confidence 34567778888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcH
Q 000438 1066 GITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQ 1145 (1510)
Q Consensus 1066 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~ 1145 (1510)
+.++..+..+++.+++.++..|.+.+++++..++.......+.+..-.....+....+..-+...|++.+++|+.||+.|
T Consensus 150 g~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq 229 (1228)
T KOG0055|consen 150 GNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGE 229 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCc
Confidence 99999999999999999999999988776655554444444444333344444445556667889999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHH---HHHHHH-HHhccCccChhHHHHHHHHHHHHHHHHHH
Q 000438 1146 TTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFC---LATLFM-ILLPSSIIKPENVGLSLSYGLSLNGVLFW 1221 (1510)
Q Consensus 1146 ~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~---~~~~~~-v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~ 1221 (1510)
++-.+++.+.++...+...... -|.++...+.-.++++ ...++. .++..+..++|.+...+.+.+.-...+..
T Consensus 230 ~~e~~ry~~~L~~~~k~gi~~g---~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgq 306 (1228)
T KOG0055|consen 230 KKEIERYSKALENALKFGIKKG---LFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQ 306 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhc
Confidence 9999999998888777654332 2333333322222222 112221 22233455565444333333333334444
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEEEEEEecCCC-CcceeeeeEEEeCCcEEEE
Q 000438 1222 AIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNT-PLVLKGITLSIHGGEKIGV 1300 (1510)
Q Consensus 1222 ~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~-~~vLk~is~~I~~GekvgI 1300 (1510)
..-....+.+..+|.++|.+.++..+......+..+. .-..+|.|+|+||+|+||.+. .++|+|+||+|++||.||+
T Consensus 307 a~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~--~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~val 384 (1228)
T KOG0055|consen 307 ASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRV--LSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVAL 384 (1228)
T ss_pred cccchHHHhccccchHHHHHHhcCCCCCCcccccCCc--ccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEE
Confidence 4445556677788899999887654432211111111 123579999999999998653 3699999999999999999
Q ss_pred ECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCC-CCCHHHHHHHHH
Q 000438 1301 VGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLE 1379 (1510)
Q Consensus 1301 VGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~ 1379 (1510)
||+|||||||++++|.|+|+|++|+|+|||.||++++.++||++||+|.|||+||++||+|||.... +.|++||.+|++
T Consensus 385 VG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k 464 (1228)
T KOG0055|consen 385 VGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAK 464 (1228)
T ss_pred ECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998665 689999999999
Q ss_pred HcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEE
Q 000438 1380 RCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISI 1459 (1510)
Q Consensus 1380 ~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~I 1459 (1510)
.++.++||.++|+||||.|||+|..||||||||+||||||+|+|+||+||||||+||+++|+.+|++|++..+++|.|+|
T Consensus 465 ~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivV 544 (1228)
T KOG0055|consen 465 AANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVV 544 (1228)
T ss_pred HccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHHHHHh
Q 000438 1460 AHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEYA 1504 (1510)
Q Consensus 1460 AHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~~~~ 1504 (1510)
||||+||+++|+|+||++|+|+|.|+|+||++++|.|++||+...
T Consensus 545 aHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~G~Y~~lv~~Q~ 589 (1228)
T KOG0055|consen 545 AHRLSTIRNADKIAVMEEGKIVEQGTHDELIALGGIYSSLVRLQE 589 (1228)
T ss_pred eeehhhhhccCEEEEEECCEEEEecCHHHHHhccchHHHHHHHHh
Confidence 999999999999999999999999999999999999999998654
No 22
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.6e-73 Score=740.50 Aligned_cols=563 Identities=23% Similarity=0.337 Sum_probs=461.8
Q ss_pred hHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 934 GLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFNP-SLFIGVYGSTAVLSMVILVVRAYFV 1011 (1510)
Q Consensus 934 ~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~~-~~~~~vy~~l~~~~~~~~~~~~~~~ 1011 (1510)
++..++.+++...+ .+..++++.++..++.++.++.+....|... ...... ..+..+++++.++..++.+++.++.
T Consensus 126 ~~~~~~~~~~~~~~--~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~ 203 (694)
T TIGR01846 126 GFSWFIPAIIRYRK--QFREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLF 203 (694)
T ss_pred cHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555554332 2234445556666666777777766554321 111111 2234445566667788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000438 1012 THVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIF 1091 (1510)
Q Consensus 1012 ~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 1091 (1510)
...+.+....++.++++++++.|++||++.++|++++|+ +|++.+...+...+...+..++.++..++++++++|++.+
T Consensus 204 ~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 282 (694)
T TIGR01846 204 AHLTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTG 282 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 6999999888776666665566566667788888888776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhh
Q 000438 1092 LVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNE 1171 (1510)
Q Consensus 1092 ~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1171 (1510)
+++..++++..+..+..+..+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..+.......
T Consensus 283 i~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (694)
T TIGR01846 283 VVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGN 362 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65544444444443443333444444445567788999999999999999999999999999988888777777666666
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCccccc
Q 000438 1172 WLGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAA 1250 (1510)
Q Consensus 1172 wl~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~ 1250 (1510)
+.....+++..+...+..++ ......+.++.|.+.....+...+..++..+...+..++....+.+|+.++.+.|+|.+
T Consensus 363 ~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 442 (694)
T TIGR01846 363 IAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPR 442 (694)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 66666666555443333322 23345678999988888888889999999999999999999999999999998877643
Q ss_pred ccccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcC
Q 000438 1251 WKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDG 1330 (1510)
Q Consensus 1251 ~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG 1330 (1510)
.. ...+.+ +..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|++||
T Consensus 443 ~~--~~~~~~--~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg 518 (694)
T TIGR01846 443 SA--GLAALP--ELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDG 518 (694)
T ss_pred CC--CCCCCC--CCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 21 111111 23578999999999987666799999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhH
Q 000438 1331 IDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1331 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
+|+++++.+++|+++++|||||.+|+|||||||...+ +++|+++++|++.+++++++.++|+||||.++|+|.+|||||
T Consensus 519 ~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq 598 (694)
T TIGR01846 519 VDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQ 598 (694)
T ss_pred EehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHH
Confidence 9999999999999999999999999999999998653 689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHH
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
|||++|||||+++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 599 ~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l 678 (694)
T TIGR01846 599 RQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEEL 678 (694)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred hcCCcHHHHHHHHH
Q 000438 1490 LERPSLFGALVQEY 1503 (1510)
Q Consensus 1490 l~~~~~f~~lv~~~ 1503 (1510)
++++|.|++|+++.
T Consensus 679 ~~~~~~y~~l~~~~ 692 (694)
T TIGR01846 679 LALQGLYARLWQQQ 692 (694)
T ss_pred HHcCChHHHHHHhh
Confidence 99999999998753
No 23
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=3.1e-73 Score=727.14 Aligned_cols=548 Identities=24% Similarity=0.322 Sum_probs=471.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 951 VVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSF--NPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILR 1028 (1510)
Q Consensus 951 ~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~--~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~ 1028 (1510)
+.+.+++.++..++....+++++...+....... ....+..+++++.++..++.+++.++....+.+....++..+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~ 95 (571)
T TIGR02203 16 LVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFE 95 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555666666666544432111111 11223445667777788888999999999999999999999999
Q ss_pred HHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1029 SILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYL 1108 (1510)
Q Consensus 1029 ~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~ 1108 (1510)
++++.|.++|++.+.|++++|+++|++.++..+...+..++..++.+++.++++++.+|++.++++..+++..++..++.
T Consensus 96 ~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~ 175 (571)
T TIGR02203 96 KLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVS 175 (571)
T ss_pred HHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988887777777777777777
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHH
Q 000438 1109 STSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLA 1188 (1510)
Q Consensus 1109 ~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~ 1188 (1510)
+..++..+......++..+++.|+++|+.+||+++.++++.+++.+..+...+..........+.....+++..+...+.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (571)
T TIGR02203 176 KRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVV 255 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777888899999999999999999999999999999998888888777766666666666666555443333
Q ss_pred HHH-HHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCce
Q 000438 1189 TLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGN 1267 (1510)
Q Consensus 1189 ~~~-~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~ 1267 (1510)
.++ ......+.+++|.+...+.|...+..++..+...+..+.....+.+|+.++.+.++|.+.. ..+.. +..+.
T Consensus 256 ~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~~--~~~~~ 330 (571)
T TIGR02203 256 LFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG---TRAIE--RARGD 330 (571)
T ss_pred HHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCCCC--CCCCe
Confidence 332 3334568889999999999999999999999999999999999999999999876653311 11111 24578
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++||+|+|++..+++|+|+||+|++||+|+|+|+||||||||+++|.|+++|++|+|++||+|+++++.+++|++++|
T Consensus 331 i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~ 410 (571)
T TIGR02203 331 VEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVAL 410 (571)
T ss_pred EEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceE
Confidence 99999999998755679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCccccCcccHHHhcCCCC--CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000438 1348 IPQEPVLFEGTVRSNIDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRL 1425 (1510)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~--~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kI 1425 (1510)
+||||.+|+||||+||..++ +.+|++++++++++++++++.++|+||||.++|+|.+||||||||+|||||++++|+|
T Consensus 411 v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~i 490 (571)
T TIGR02203 411 VSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPI 490 (571)
T ss_pred EccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998663 6899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHHHHH
Q 000438 1426 LFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEY 1503 (1510)
Q Consensus 1426 LiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~~~ 1503 (1510)
|+||||||+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|+++++.|++++++.
T Consensus 491 llLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~~~~~~~~~~~ 568 (571)
T TIGR02203 491 LILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARNGLYAQLHNMQ 568 (571)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcCCHHHHHHHHh
Confidence 999999999999999999999999989999999999999999999999999999999999999999889999988754
No 24
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.6e-73 Score=672.50 Aligned_cols=512 Identities=22% Similarity=0.308 Sum_probs=430.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHH
Q 000438 987 SLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVG 1066 (1510)
Q Consensus 987 ~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~ 1066 (1510)
..+++..+++.++..++.+.+.......+.++...+++++++++.+.+..+-...|+|++...+..-++.++..+..++.
T Consensus 40 ~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLP 119 (559)
T COG4988 40 LPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLP 119 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666667777888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhC
Q 000438 1067 ITVAMYITLLGIFIITCQYAWPTIF---LVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFG 1143 (1510)
Q Consensus 1067 ~~~~~~~~~~~~~~v~~~~~~~~~~---~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~ 1143 (1510)
..+.+.+..+.+++.++..+|...+ +..|++++++.+...- ++...+..-.+-..+.+||.+.++|+.|+|+|+
T Consensus 120 q~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~~---a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~ 196 (559)
T COG4988 120 QMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGLA---AKDASEKQFSALARLSGHFLDRLRGLETLRAFG 196 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhc
Confidence 9999999999999999999998544 4567777665543322 222222333345667899999999999999999
Q ss_pred cHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHh-cc-CccChhHHHHHHHHHHHHHHHHHH
Q 000438 1144 KQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILL-PS-SIIKPENVGLSLSYGLSLNGVLFW 1221 (1510)
Q Consensus 1144 ~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~-~~-~~~~~g~~Gl~l~y~l~l~~~l~~ 1221 (1510)
..+...++..+.-.+..+........+---+..+|++..+.++.+++..... .. |.++-...-+++-.+.-+..++..
T Consensus 197 ~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~ 276 (559)
T COG4988 197 RTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRD 276 (559)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHH
Confidence 9888777776666666666655555555556778888877776666654322 22 344433333444455566677777
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEE
Q 000438 1222 AIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVV 1301 (1510)
Q Consensus 1222 ~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIV 1301 (1510)
+-..+..-.+...+.+.+..+.+.|.+.+...+ .....|....+++.+|++++|+++. ++++|+||+++|||++|||
T Consensus 277 lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~--~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~talv 353 (559)
T COG4988 277 LGSFFHAAAAGEAAADKLFTLLESPVATPGSGE--KAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQLTALV 353 (559)
T ss_pred HHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcc--ccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcEEEEE
Confidence 777777777778889999999988776443211 1122333345677779999999775 6999999999999999999
Q ss_pred CCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCC-CCCHHHHHHHHHH
Q 000438 1302 GRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLER 1380 (1510)
Q Consensus 1302 GrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~ 1380 (1510)
|+||||||||+++|.|+.+|++|+|.+||+|+.+++.+++|+++++|||+|++|+|||||||...+ +.+||||++|+++
T Consensus 354 G~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~ 433 (559)
T COG4988 354 GASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQ 433 (559)
T ss_pred CCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998665 4899999999999
Q ss_pred cCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEe
Q 000438 1381 CQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIA 1460 (1510)
Q Consensus 1381 ~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IA 1460 (1510)
+++.++++. |+||||.+||+|.+|||||+||++|||||+++++++++|||||+||.|||+.|++.|.+.++++|||+||
T Consensus 434 a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~it 512 (559)
T COG4988 434 AGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVIT 512 (559)
T ss_pred hcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEE
Confidence 999999999 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHHHHHhh
Q 000438 1461 HRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEYAN 1505 (1510)
Q Consensus 1461 HRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~~~~~ 1505 (1510)
||++.+.++|+|+|||+|+++|.|+|++|.+++|.|++|+++...
T Consensus 513 Hrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~~q~~ 557 (559)
T COG4988 513 HRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLKQQEG 557 (559)
T ss_pred cChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999987543
No 25
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.7e-73 Score=658.66 Aligned_cols=500 Identities=20% Similarity=0.317 Sum_probs=420.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHH
Q 000438 996 TAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITL 1075 (1510)
Q Consensus 996 l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~ 1075 (1510)
+++...+..++..+.......+.-..++.++|+++...+..-...-..|+++||+..|++.+|..+-..+...+..+...
T Consensus 67 ~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~ 146 (573)
T COG4987 67 LAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLI 146 (573)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHH
Confidence 34445555566666777888999999999999999999999999999999999999999999999988888888877777
Q ss_pred HHHHHHHHHHhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHH
Q 000438 1076 LGIFIITCQYAWPTIFLV-IPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVN 1154 (1510)
Q Consensus 1076 ~~~~~v~~~~~~~~~~~~-ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~ 1154 (1510)
+++.+...+.+|++.+.+ ..++++.+.+.-.+.+..|...+--...++.+.++|.|.+.|....+.||+++.|.+....
T Consensus 147 ~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~ 226 (573)
T COG4987 147 AVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEA 226 (573)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHH
Confidence 777777777788766543 3333444444555555666666666778899999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHH-HHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 000438 1155 RVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLA-TLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAI-YMSCFVENR 1232 (1510)
Q Consensus 1155 ~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~-~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v-~~~~~le~~ 1232 (1510)
..+...+..........|-.+.+.++..+++... +........|..+...+.+++--.+.....+.-+. ..+.++...
T Consensus 227 ~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~ 306 (573)
T COG4987 227 TEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQV 306 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHH
Confidence 9998889888899999999999888888766633 33333344444432222222211122222222222 334677788
Q ss_pred hHHHHHHHHhhcCcccccccccCCCCCCCCCCCc-eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHH
Q 000438 1233 MVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHG-NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTL 1311 (1510)
Q Consensus 1233 ~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g-~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTL 1311 (1510)
.-|..|+.+..+.++|.... . +.-|..+ .++++||+|+|+.+.++||+|+||++++||||||+||||||||||
T Consensus 307 ~~Sa~Rl~~i~~q~~e~~~~-~-----~~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTl 380 (573)
T COG4987 307 IASARRLNDILDQKPEVTFP-D-----EQTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTL 380 (573)
T ss_pred HHHHHHHhhhccCCcccCCC-c-----cccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHH
Confidence 88999999988877765432 1 1112222 799999999999988899999999999999999999999999999
Q ss_pred HHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCC-CCCCHHHHHHHHHHcCchHHHHhC
Q 000438 1312 IQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAK 1390 (1510)
Q Consensus 1312 l~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~l 1390 (1510)
+++|.|.++|++|+|..+|.+++.++.+++|+.|++++|.+++|+||+|+||... .+.||||+|+||+++||++++++.
T Consensus 381 lqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~ 460 (573)
T COG4987 381 LQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESA 460 (573)
T ss_pred HHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999743 368999999999999999999999
Q ss_pred cCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcC
Q 000438 1391 PDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCD 1470 (1510)
Q Consensus 1391 p~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~D 1470 (1510)
|+||+|.+||+|.+||||||||++|||+||++.++++|||||.+||++||+.|.+.|.+..+|+|+|+||||+..+..||
T Consensus 461 p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~d 540 (573)
T COG4987 461 PDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMD 540 (573)
T ss_pred hhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCEEEEecChhHHhcCCcHHHHHHH
Q 000438 1471 RVIVVDAGWAKEFGKPSRLLERPSLFGALVQ 1501 (1510)
Q Consensus 1471 rIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~ 1501 (1510)
||+|||+|+++|.|+|++|++++|.|++|.+
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~~~g~~~~l~q 571 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLANNGRYKRLYQ 571 (573)
T ss_pred EEEEEECCeeeecCCHHhhhccccHHHHHhc
Confidence 9999999999999999999999999999875
No 26
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.3e-71 Score=710.32 Aligned_cols=549 Identities=20% Similarity=0.291 Sum_probs=443.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 951 VVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSI 1030 (1510)
Q Consensus 951 ~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~i 1030 (1510)
+.+++++.++..++.+..++++....|.... ......++..++++.++..+..++..........+....+..++++++
T Consensus 21 ~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l 99 (588)
T PRK13657 21 GILLAVANVLLAAATFAEPILFGRIIDAISG-KGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFERI 99 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666777777778887766653211 111122233344444444444444444445555555566677999999
Q ss_pred hcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1031 LHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLST 1110 (1510)
Q Consensus 1031 l~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~ 1110 (1510)
++.|+.+|++.+.|++++|+++|++.+...+...+..++...+..++.+++++..+|++.++++..+++++.+..++.+.
T Consensus 100 ~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~ 179 (588)
T PRK13657 100 IQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMRK 179 (588)
T ss_pred HhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999987777777777777777777777788888888776666666666667777777
Q ss_pred HHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHH
Q 000438 1111 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATL 1190 (1510)
Q Consensus 1111 ~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~ 1190 (1510)
.++..+......+...+++.|+++|+.+||+|+.++.+.+++.+..+...+..........+.....+++..+...++.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (588)
T PRK13657 180 TKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAILV 259 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777778889999999999999999999999998888887777766665544444444444444333332222222
Q ss_pred H-HHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEE
Q 000438 1191 F-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVD 1269 (1510)
Q Consensus 1191 ~-~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~ 1269 (1510)
+ ......+.++.|.+...+.|...+...+..+...+..+.....+.+|+.++.+.+++.+.. ....+++ +..+.|+
T Consensus 260 ~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~-~~~~~~~--~~~~~I~ 336 (588)
T PRK13657 260 LGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP-PGAIDLG--RVKGAVE 336 (588)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-CCCCCcC--CCCCeEE
Confidence 2 3334567899999888888988899998888888888999999999999988765442211 0110111 2346899
Q ss_pred EEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEec
Q 000438 1270 LIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIP 1349 (1510)
Q Consensus 1270 f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIp 1349 (1510)
++||+|+|+++ +++|+|+||+++|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++.+++|++|+|+|
T Consensus 337 ~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~ 415 (588)
T PRK13657 337 FDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVF 415 (588)
T ss_pred EEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEe
Confidence 99999999754 45999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcccHHHhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000438 1350 QEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFM 1428 (1510)
Q Consensus 1350 Qdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiL 1428 (1510)
|||.+|+||||+||... ++.+|++++++++.+++++++.++|+|+||.++|+|.+||||||||+||||||+++|+||||
T Consensus 416 Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~iliL 495 (588)
T PRK13657 416 QDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILIL 495 (588)
T ss_pred cCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999865 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHHHHHh
Q 000438 1429 DEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEYA 1504 (1510)
Q Consensus 1429 DEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~~~~ 1504 (1510)
|||||+||++|++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++++.|++|+++..
T Consensus 496 DEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~~ 571 (588)
T PRK13657 496 DEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVARGGRFAALLRAQG 571 (588)
T ss_pred eCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHCCChHHHHHHHhh
Confidence 9999999999999999999998889999999999999999999999999999999999999998899999998654
No 27
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-74 Score=651.82 Aligned_cols=530 Identities=19% Similarity=0.298 Sum_probs=420.7
Q ss_pred hhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Q 000438 965 LMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVL------SMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFF 1038 (1510)
Q Consensus 965 ~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~------~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ff 1038 (1510)
....+...++..+.-..|..........|+.+.++ +.++..+|+++.......+.+.+--++++++....+.|.
T Consensus 231 ~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwH 310 (790)
T KOG0056|consen 231 NVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWH 310 (790)
T ss_pred hhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeee
Confidence 33334444444433223333334445556655544 356778888888888999999999999999999999999
Q ss_pred ccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHH-HHHHHHHHhHHHHHHHHHHHHHHHHHH----HHHHHHHHH
Q 000438 1039 DTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLG-IFIITCQYAWPTIFLVIPLAWANYWYR----GYYLSTSRE 1113 (1510)
Q Consensus 1039 d~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~ipl~~~~~~~~----~~y~~~~r~ 1113 (1510)
-.+.+|+++.-+.+..+.+. .+...+..+.-.+.-+.. ++-.....+|++.+++...+.+|.++. ..--+..|.
T Consensus 311 L~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~ 389 (790)
T KOG0056|consen 311 LNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRK 389 (790)
T ss_pred ecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHH
Confidence 99999999888777666655 332222222222222222 222233456777666666655554432 111222233
Q ss_pred HHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHHH-H
Q 000438 1114 LTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLF-M 1192 (1510)
Q Consensus 1114 l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~ 1192 (1510)
+...+.++++ .-.+++-+..|+|-|++|+.-.+++.+.++.+++..+.....-..+...-+.+..+......++ +
T Consensus 390 Mn~~~nesrA----r~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~a 465 (790)
T KOG0056|consen 390 MNNSWNESRA----RQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCA 465 (790)
T ss_pred hhhhhhhhhh----hhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheee
Confidence 3333344443 4468899999999999999999999999999999888777665555544444433333222222 2
Q ss_pred HHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEE
Q 000438 1193 ILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLID 1272 (1510)
Q Consensus 1193 v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~ 1272 (1510)
+.+..+..+.|..-+..+|.+++.++++|+-..+..++++.+-.||+.+..+.++|-.+ .+..|+---.+|.|+|+|
T Consensus 466 Y~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd---~P~a~pl~~~~G~i~fsn 542 (790)
T KOG0056|consen 466 YRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVD---LPGAPPLKVTQGKIEFSN 542 (790)
T ss_pred eeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhc---CCCCCCccccCCeEEEEE
Confidence 23345677778888899999999999999999999999999999999999876665432 111222223579999999
Q ss_pred EEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCcc
Q 000438 1273 LQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEP 1352 (1510)
Q Consensus 1273 vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp 1352 (1510)
|+|.|.|+.| ||+||||+++||+.||+||+||+||||++++|+|++|.++|+|.|||+||+.+..+.||++||+||||.
T Consensus 543 vtF~Y~p~k~-vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDt 621 (790)
T KOG0056|consen 543 VTFAYDPGKP-VLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDT 621 (790)
T ss_pred eEEecCCCCc-eeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcc
Confidence 9999998865 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCC
Q 000438 1353 VLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEA 1431 (1510)
Q Consensus 1353 ~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEa 1431 (1510)
+||++||..||.... ..+|||+.+|.+.+++||.|...|+|++|.|||+|-.||||||||+++||++||+|.|++||||
T Consensus 622 vLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEA 701 (790)
T KOG0056|consen 622 VLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEA 701 (790)
T ss_pred eeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcch
Confidence 999999999998543 6899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCC-cHHHHHHHHH
Q 000438 1432 TASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERP-SLFGALVQEY 1503 (1510)
Q Consensus 1432 TsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~-~~f~~lv~~~ 1503 (1510)
||+||..||+.||+.+.+..+++|.|+||||++||.++|.|+|+++|+|+|.|+|+||++++ |.|++|++..
T Consensus 702 TSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~q 774 (790)
T KOG0056|consen 702 TSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQAQ 774 (790)
T ss_pred hhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999997 9999999543
No 28
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.9e-71 Score=709.31 Aligned_cols=562 Identities=21% Similarity=0.305 Sum_probs=457.0
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 937 VYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFN-PSLFIGVYGSTAVLSMVILVVRAYFVTHV 1014 (1510)
Q Consensus 937 ~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~~~ 1014 (1510)
.++.|++..++ .+.+.+++.++..++.++.++.+....+... ..... ...++.+++++.++..++.+++.++....
T Consensus 8 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (576)
T TIGR02204 8 ALWPFVRPYRG--RVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWL 85 (576)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455554322 2233444455666666666666655443211 11111 12234445555556667778888888999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000438 1015 GLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVI 1094 (1510)
Q Consensus 1015 ~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i 1094 (1510)
+.+....++..+++++++.|.++|++.+.|++++|+++|++.++..+...+..++...+.+++.+++++..+|++.++++
T Consensus 86 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 165 (576)
T TIGR02204 86 GERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVL 165 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888888888888888888888888888766554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHH
Q 000438 1095 PLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLG 1174 (1510)
Q Consensus 1095 pl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~ 1174 (1510)
..+++.+.+..++.+..+...+.....+....+++.|+++|+.+||+|+.++.+.+++.+..+...+..........|+.
T Consensus 166 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (576)
T TIGR02204 166 LAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLT 245 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444455555566666667778889999999999999999999999988888888876666555555555555
Q ss_pred HHHHHHHHHHHHHHHHH-HHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccc
Q 000438 1175 FRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKM 1253 (1510)
Q Consensus 1175 ~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~ 1253 (1510)
.....+..+...+..++ ......+.++.|.+.....|...+..++..+...+..+.+...+.+|+.++.+.++|.+...
T Consensus 246 ~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~ 325 (576)
T TIGR02204 246 AIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPA 325 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCC
Confidence 44444433322222222 23345678899998888889999999999999999999999999999999988765532111
Q ss_pred cCCCCCCCCCCCceEEEEEEEEEecCCC-CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCee
Q 000438 1254 EDRLPPPNWPAHGNVDLIDLQVRYRSNT-PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGID 1332 (1510)
Q Consensus 1254 ~~~~~~~~wp~~g~I~f~~vs~~Y~~~~-~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~d 1332 (1510)
...+..+|..+.|+|+||+|+|+++. +++|+|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|.+||+|
T Consensus 326 --~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~ 403 (576)
T TIGR02204 326 --HPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVD 403 (576)
T ss_pred --CCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEE
Confidence 11112234557899999999998643 569999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHhhcceEEecCccccCcccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1333 ISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1333 I~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
+++++.+++|++++|+||||.+|+|||||||...+ +.+|++++++++++++.+++.++|+|+||+++|+|.+|||||||
T Consensus 404 i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Q 483 (576)
T TIGR02204 404 LRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQ 483 (576)
T ss_pred HHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHH
Confidence 99999999999999999999999999999998654 57899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhc
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
|++||||++++|+|||||||||++|.+|++.|.+.|++..+++|+|+||||++.+..||||++|++|+++|.|+|++|++
T Consensus 484 rl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 484 RIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred HHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHH
Q 000438 1492 RPSLFGALVQE 1502 (1510)
Q Consensus 1492 ~~~~f~~lv~~ 1502 (1510)
+.+.|++|++.
T Consensus 564 ~~~~~~~l~~~ 574 (576)
T TIGR02204 564 KGGLYARLARL 574 (576)
T ss_pred cCChHHHHHhh
Confidence 88999999865
No 29
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.1e-71 Score=705.55 Aligned_cols=508 Identities=19% Similarity=0.244 Sum_probs=408.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 953 AVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGV--YGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSI 1030 (1510)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v--y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~i 1030 (1510)
+.+++.++..++.++.++.+++..+...........+..+ .+++.++..++.+++.++....+.+....++.++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l 96 (529)
T TIGR02868 17 VAILLGALALGSAVALLGVSAWLISRAAEMPPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRL 96 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444455566666666666665554211111111111111 12234556667777888888889999999999999999
Q ss_pred hcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHHHHHH
Q 000438 1031 LHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYW-YRGYYLS 1109 (1510)
Q Consensus 1031 l~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~-~~~~y~~ 1109 (1510)
++.|.+||++.++|++++|+++|++.++..+...+..++..++.+++.+++++..+|.+.++++..++++.+ ...++.+
T Consensus 97 l~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~ 176 (529)
T TIGR02868 97 ARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLR 176 (529)
T ss_pred hccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998888888888888888888899999887766544333333 3334444
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHH
Q 000438 1110 TSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLAT 1189 (1510)
Q Consensus 1110 ~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~ 1189 (1510)
..+...+......+.+.+++.|+++|+.+||+|+.|+++.+++.+..+...+..........+......++..+...++.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (529)
T TIGR02868 177 AARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGAL 256 (529)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555556678899999999999999999999999999888888777766655554444444444444333322222
Q ss_pred HH-HHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceE
Q 000438 1190 LF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNV 1268 (1510)
Q Consensus 1190 ~~-~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I 1268 (1510)
++ ......+.++.|.+...+.|...+...+..+...+..+.....+.+|+.++.+.++|.+... ...+...+|..+.|
T Consensus 257 ~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~~~~~~~~~~~~~I 335 (529)
T TIGR02868 257 WAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGV-VPAAGALGLGKPTL 335 (529)
T ss_pred HHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCC-CCCCcccCCCCceE
Confidence 22 22344677888888888888888888888888889999999999999999998776533211 11111123456789
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEe
Q 000438 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGII 1348 (1510)
Q Consensus 1269 ~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iI 1348 (1510)
+|+||+|+|+++. ++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|++++ .+++|++|+||
T Consensus 336 ~~~~vsf~Y~~~~-~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~V 413 (529)
T TIGR02868 336 ELRDLSFGYPGSP-PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISVF 413 (529)
T ss_pred EEEEEEEecCCCC-ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEEE
Confidence 9999999997654 599999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred cCccccCcccHHHhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000438 1349 PQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1510)
Q Consensus 1349 pQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILi 1427 (1510)
||||.||+|||||||... ++.+|||+++|++.+++++++.++|+||||+|||+|.|||||||||||||||++++|+|||
T Consensus 414 ~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~ili 493 (529)
T TIGR02868 414 AQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPILL 493 (529)
T ss_pred ccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999999999999875 4689999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecCh
Q 000438 1428 MDEATASVDSQTDAEIQRIIREEFAACTIISIAHRI 1463 (1510)
Q Consensus 1428 LDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl 1463 (1510)
||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 494 LDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 494 LDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 999999999999999999999988999999999996
No 30
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2.7e-70 Score=697.16 Aligned_cols=561 Identities=19% Similarity=0.253 Sum_probs=446.2
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 938 YKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLK 1017 (1510)
Q Consensus 938 y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~ 1017 (1510)
++.|++..+ ..+.+.+++.++..++.++.++.++...|..... .....++..++++.++..+..++........+.+
T Consensus 10 l~~~l~~~k--~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (585)
T TIGR01192 10 ALSYLNVHK--NRVLLIVIANITLAAITIAEPILFGRIIDAISSK-SDVLPTLALWAGFGVFNTIAYVLVAREADRLAHG 86 (585)
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344554332 2334455555666677777777766655431111 1111222223333333444444444455555666
Q ss_pred HHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000438 1018 TAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLA 1097 (1510)
Q Consensus 1018 ~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~ 1097 (1510)
....++.++++++++.|++||+++++|++++|+++|++.+...+...+...+..++.+++.+++++..+|.+.++++.++
T Consensus 87 ~~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 166 (585)
T TIGR01192 87 RRATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLG 166 (585)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667779999999999999999999999999999999999888877777777777777777888889999887776666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHH
Q 000438 1098 WANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRL 1177 (1510)
Q Consensus 1098 ~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l 1177 (1510)
+++.++.+.+.+..++..+......+...+++.|+++|+.+||+|+.++.+.+++.+..+...+..+.......+.....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (585)
T TIGR01192 167 ILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLN 246 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666777777777777777777788899999999999999999999999888887777766555444333333332222
Q ss_pred HHHHHHHHHHHHH-HHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCC
Q 000438 1178 ELLGSFTFCLATL-FMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDR 1256 (1510)
Q Consensus 1178 ~~l~~~~~~~~~~-~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~ 1256 (1510)
.++..+...++.+ .......+.++.|.+...+.|...+...+..+...+..+.....+.+|+.++.+.+++.... .
T Consensus 247 ~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~---~ 323 (585)
T TIGR01192 247 RMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEP---A 323 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC---c
Confidence 3333222222222 22334467888888888888888888888888888888999999999999988765442211 1
Q ss_pred CCCCCCC-CCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCC
Q 000438 1257 LPPPNWP-AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL 1335 (1510)
Q Consensus 1257 ~~~~~wp-~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~ 1335 (1510)
.+ ..++ ..+.|+++||+|+|+++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+|+.+
T Consensus 324 ~~-~~~~~~~~~i~~~~v~~~y~~~~-~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~ 401 (585)
T TIGR01192 324 DA-PELPNVKGAVEFRHITFEFANSS-QGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINT 401 (585)
T ss_pred cC-CCCCCCCCeEEEEEEEEECCCCC-ccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhh
Confidence 11 1122 356899999999997543 58999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHhhcceEEecCccccCcccHHHhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1336 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1336 i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
++.+++|++++++||||.+|++||||||... .+.+|+|++++++.+++++++.++|+|+||.++|+|.+||||||||++
T Consensus 402 ~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~ 481 (585)
T TIGR01192 402 VTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLA 481 (585)
T ss_pred CCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999865 357899999999999999999999999999999999999999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCc
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPS 1494 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~ 1494 (1510)
|||||+++|+|||||||||+||.+|++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++++
T Consensus 482 lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 561 (585)
T TIGR01192 482 IARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKDG 561 (585)
T ss_pred HHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCCC
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh
Q 000438 1495 LFGALVQEYANR 1506 (1510)
Q Consensus 1495 ~f~~lv~~~~~~ 1506 (1510)
.|++|++.+...
T Consensus 562 ~y~~l~~~~~~~ 573 (585)
T TIGR01192 562 RFYKLLRRSGLL 573 (585)
T ss_pred hHHHHHHhCccc
Confidence 999999877543
No 31
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.3e-70 Score=699.08 Aligned_cols=511 Identities=20% Similarity=0.247 Sum_probs=422.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHH
Q 000438 989 FIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGIT 1068 (1510)
Q Consensus 989 ~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~ 1068 (1510)
++.+++++.++..++.+++.++....+.+....++.++++++++.|++||++.++|++++|+++|++.+...+...+..+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~ 117 (569)
T PRK10789 38 WIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTL 117 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34445555556666777777788888999999999999999999999999999999999999999999987776666666
Q ss_pred HHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHH
Q 000438 1069 VAMYITLLGIFIIT-CQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTT 1147 (1510)
Q Consensus 1069 ~~~~~~~~~~~~v~-~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~ 1147 (1510)
+...+..++.++++ +..+|++.++++..+++..++.+.+.+..++..+......+.+.+++.|+++|+.+||+|+.+++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~ 197 (569)
T PRK10789 118 VDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR 197 (569)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHH
Confidence 66655555554444 46788776655444444444555555555555555556678889999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHH-HHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1148 FYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLA-TLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMS 1226 (1510)
Q Consensus 1148 f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~-~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~ 1226 (1510)
+.+++.+..+...+..........+..........+...+. .+.......+.++.|.+.....|...+..++..+...+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~ 277 (569)
T PRK10789 198 QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMF 277 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888887777666555544433333332332222221111 11223344677888888888888888888888888889
Q ss_pred HHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCC
Q 000438 1227 CFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGS 1306 (1510)
Q Consensus 1227 ~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGS 1306 (1510)
..+.....+.+|+.++.+.++|.+.. ....+ +..|.|+|+|++|+|+.+..++|+|+||+|+|||++||+|+|||
T Consensus 278 ~~~~~~~~a~~ri~~ll~~~~~~~~~--~~~~~---~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGs 352 (569)
T PRK10789 278 NIVERGSAAYSRIRAMLAEAPVVKDG--SEPVP---EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGS 352 (569)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCC--CCCCC---CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCCC
Confidence 99999999999999998876543211 11111 23568999999999986555799999999999999999999999
Q ss_pred CHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCC-CCCCHHHHHHHHHHcCchH
Q 000438 1307 GKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKD 1385 (1510)
Q Consensus 1307 GKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~ 1385 (1510)
|||||+++|.|+++|++|+|.+||+|+++++.+++|++++++||||.+|+||||+||... .+++|++++++++.+++++
T Consensus 353 GKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~ 432 (569)
T PRK10789 353 GKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHD 432 (569)
T ss_pred CHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999865 3689999999999999999
Q ss_pred HHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhh
Q 000438 1386 VVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPT 1465 (1510)
Q Consensus 1386 ~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~t 1465 (1510)
++.++|+|+||.++|+|.+||||||||++||||++++|+|||||||||+||+++++.|++.|++..+++|+|+||||+++
T Consensus 433 ~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~ 512 (569)
T PRK10789 433 DILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSA 512 (569)
T ss_pred HHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred hhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHHHHHh
Q 000438 1466 VMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEYA 1504 (1510)
Q Consensus 1466 i~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~~~~ 1504 (1510)
+..||+|++|++|+++|.|+|++|+++++.|++|++...
T Consensus 513 ~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~~ 551 (569)
T PRK10789 513 LTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQQ 551 (569)
T ss_pred HHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHhh
Confidence 999999999999999999999999999999999997543
No 32
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2e-70 Score=639.37 Aligned_cols=502 Identities=24% Similarity=0.363 Sum_probs=391.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHH
Q 000438 987 SLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVG 1066 (1510)
Q Consensus 987 ~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~ 1066 (1510)
...+..|++..+++.+|..++.+.+++...++-+....+.+.+.+...+++|.+..+|.+-+...+-...+...+...+.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~ 153 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVF 153 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999998888777777666666655555
Q ss_pred HHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHH
Q 000438 1067 ITVAMYITLLGIFIIT-CQYAWPTIFLVIPLAWANYW----YRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRA 1141 (1510)
Q Consensus 1067 ~~~~~~~~~~~~~~v~-~~~~~~~~~~~ipl~~~~~~----~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIra 1141 (1510)
.++-..+.+......+ .-..+.+.++++.....|.. +.++-.+..++..+ +........-|++.+-.+||+
T Consensus 154 ~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~----Adn~as~~~~dsL~Nye~VKs 229 (591)
T KOG0057|consen 154 NIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNN----ADNSASRRAYDSLINYEIVKS 229 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHh----hhhHHHHHHHHHHhhHHHHHH
Confidence 5544444333322222 12223333222222222211 11111111222222 223344567799999999999
Q ss_pred hCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHH-Hh----ccCccChhHHHHHHHHHHHHH
Q 000438 1142 FGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMI-LL----PSSIIKPENVGLSLSYGLSLN 1216 (1510)
Q Consensus 1142 f~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v-~~----~~~~~~~g~~Gl~l~y~l~l~ 1216 (1510)
||.|++-.+++...+.+..+......+....+ ++....++.+...++. +. ..+.++.|..-+..+...++.
T Consensus 230 fNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~l----nfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~ 305 (591)
T KOG0057|consen 230 FNNEEYEASRYDGSLKTYERAGLKYSSSLAFL----NFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLS 305 (591)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhHHhHHHHH----HHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHH
Confidence 99999999999988888877766555444333 3334333333222222 11 234555666666677777888
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCc
Q 000438 1217 GVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGE 1296 (1510)
Q Consensus 1217 ~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~Ge 1296 (1510)
..++.+-..+.++-.++.-.+-.....+. +.. +.+. +++--+..|.|+|+||+|.|.|+. ++|+|+||+|++||
T Consensus 306 ~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~--~~~--i~~~-~~~i~~~~~~I~F~dV~f~y~~k~-~iL~gvsf~I~kGe 379 (591)
T KOG0057|consen 306 LPLNFLGSVYRELRQALTDMRTLFILLEV--DED--IQEA-ALPIELFGGSIEFDDVHFSYGPKR-KVLKGVSFTIPKGE 379 (591)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHhhhhh--hhh--hhhc-cCCcccCCCcEEEEeeEEEeCCCC-ceecceeEEecCCC
Confidence 88888887777777766655544332211 110 1111 122223457899999999999765 49999999999999
Q ss_pred EEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCC-CCCHHHHH
Q 000438 1297 KIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIW 1375 (1510)
Q Consensus 1297 kvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~ 1375 (1510)
||||||++||||||++++|+|+++ .+|+|+|||+||++++++.+|+.||+||||.+||++||-+||...+ ..+|||+.
T Consensus 380 kVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~ 458 (591)
T KOG0057|consen 380 KVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVV 458 (591)
T ss_pred EEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHH
Confidence 999999999999999999999999 9999999999999999999999999999999999999999997654 68999999
Q ss_pred HHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCce
Q 000438 1376 KSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACT 1455 (1510)
Q Consensus 1376 ~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~T 1455 (1510)
+++++++++|.+.++|+||+|.|||+|..||||||||++||||+||+|+|+++|||||+||.+||+.|.+.|+....++|
T Consensus 459 e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rT 538 (591)
T KOG0057|consen 459 EACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRT 538 (591)
T ss_pred HHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred EEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHHHHH
Q 000438 1456 IISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEY 1503 (1510)
Q Consensus 1456 vI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~~~ 1503 (1510)
+|+|+||++++++||+|++||+|+|+|+|+|+||+++.+.|+.++...
T Consensus 539 vI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~~~ 586 (591)
T KOG0057|consen 539 VIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWTTQ 586 (591)
T ss_pred EEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhccc
Confidence 999999999999999999999999999999999999558888877643
No 33
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.7e-69 Score=685.50 Aligned_cols=517 Identities=20% Similarity=0.277 Sum_probs=419.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhhccccCC-CC-CCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 954 VLLLSVAWQGSLMAGDYWLSYETSEDH-SM-SFN-PSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSI 1030 (1510)
Q Consensus 954 ~~~~~~~~~~~~~~~~~wl~~~~~~~~-~~-~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~i 1030 (1510)
.+++.++..++.++.++.+++..+... .. ... ...+...+++++++..++.+++.+.....+.+...+++.++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l 87 (529)
T TIGR02857 8 LGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAV 87 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555666666666665554321 11 111 123445566667777888889999999999999999999999999
Q ss_pred hcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1031 LHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLST 1110 (1510)
Q Consensus 1031 l~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~ 1110 (1510)
++.|..||++.++|++++|+++|++.++..+...+..++...+.+++.+++++..+|.+.++++..+++..++...+.+.
T Consensus 88 ~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~ 167 (529)
T TIGR02857 88 AALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWA 167 (529)
T ss_pred HhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888877777777778888888888888876655443333333333333333
Q ss_pred HHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHH-
Q 000438 1111 SRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLAT- 1189 (1510)
Q Consensus 1111 ~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~- 1189 (1510)
.+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..........+.....+++..+...+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (529)
T TIGR02857 168 AQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAV 247 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444445566788999999999999999999999999988887777666655555555555555555544333222
Q ss_pred HHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEE
Q 000438 1190 LFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVD 1269 (1510)
Q Consensus 1190 ~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~ 1269 (1510)
+.......+.++.|.+...+.|+..+...+..+...+..+.....+.+|+.++.+.+++... . .+...+..+.|+
T Consensus 248 ~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~----~-~~~~~~~~~~i~ 322 (529)
T TIGR02857 248 YIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG----K-APVTAAPAPSLE 322 (529)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC----C-cCCCCCCCCeEE
Confidence 22222336778888877788888888888888888999999999999999999875543211 1 111122346899
Q ss_pred EEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEec
Q 000438 1270 LIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIP 1349 (1510)
Q Consensus 1270 f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIp 1349 (1510)
|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|.+||+|+++++.+++|+++++||
T Consensus 323 ~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~ 402 (529)
T TIGR02857 323 FSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVP 402 (529)
T ss_pred EEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEc
Confidence 99999999876557999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCcccHHHhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000438 1350 QEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFM 1428 (1510)
Q Consensus 1350 Qdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiL 1428 (1510)
|||.+|+|||||||... ++.+|+++++|++.++++++++++|+||||.++|+|.+||||||||++||||++++|+||||
T Consensus 403 Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ilil 482 (529)
T TIGR02857 403 QHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLL 482 (529)
T ss_pred CCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999865 45799999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEE
Q 000438 1429 DEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVV 1475 (1510)
Q Consensus 1429 DEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL 1475 (1510)
|||||+||++|++.|++.|++..+++|+|+||||+++++.||+|+||
T Consensus 483 DE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 483 DEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred eCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999988899999999999999999999986
No 34
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.3e-68 Score=685.65 Aligned_cols=544 Identities=19% Similarity=0.241 Sum_probs=431.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 319 RTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGM 398 (1510)
Q Consensus 319 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~ 398 (1510)
++...+.+++.+++..++.++..++..+.|+++..+++.+..++......+.++.++++..++..++.....+...+.+.
T Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (588)
T PRK11174 13 LKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAGQ 92 (588)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556778888888999999999999999999999999764221111222334555666667777777777778889999
Q ss_pred HHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000438 399 LIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGA-SVITTVV 476 (1510)
Q Consensus 399 riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~-s~l~gl~ 476 (1510)
++...+...+|+|.++++.....++++|+++|.++.|++++.+++. .+..++...+.+++++++++. ++| .+++.++
T Consensus 93 ~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~l~~l~ 171 (588)
T PRK11174 93 HIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFP-INWAAGLILLG 171 (588)
T ss_pred HHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 9999999999999999999988889999999999999999998864 556666665555555544432 332 2222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Q 000438 477 GIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRI----LSFRESEFGWLTKFMYSIS 552 (1510)
Q Consensus 477 ~~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I----~~~R~~El~~l~~~~~~~a 552 (1510)
++++...+...+.++.++.+++.++..++..+.+.|.++|+++||.|+||+.+.++. ++.|+.+.+..+.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (588)
T PRK11174 172 TAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSA 251 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444567788888889999999999999999999999999999999887776 5556666555554433333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC--------ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000438 553 GNIIVMWSTPVLISTLTFATALLFGV--------PLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYML 624 (1510)
Q Consensus 553 ~~~~~~~~~p~~v~~~tF~~~~l~~~--------~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~ 624 (1510)
...++.. .+.++ ++.++.+.+.|. .+++..+|.++.+...+..|+..++..+..+.++++|.+||.++++
T Consensus 252 ~~~~~~~-~~~~~-~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~ 329 (588)
T PRK11174 252 VLEFFAS-ISIAL-VAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLE 329 (588)
T ss_pred HHHHHHH-HHHHH-HHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3322222 22222 223333333331 2344455666677788899999999999999999999999999998
Q ss_pred cccCccccccccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEE
Q 000438 625 SRELVNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKV 704 (1510)
Q Consensus 625 ~~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i 704 (1510)
.++.++..............|+++|++|.|++ ++++|+|+||++++||++||+|++|||||||+++|+|++ |++|+|
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I 406 (588)
T PRK11174 330 TPLAHPQQGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSL 406 (588)
T ss_pred CCCcccCCCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEE
Confidence 76532211110001012246999999987753 357999999999999999999999999999999999999 999999
Q ss_pred EECC-------------eEEEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCcc
Q 000438 705 KVCG-------------TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINL 770 (1510)
Q Consensus 705 ~~~g-------------~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~L 770 (1510)
.++| .++||||+|++|++||+|||.+|.| .+++.+.++++.|+++++++.+|+|++|.+||+|.+|
T Consensus 407 ~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~L 486 (588)
T PRK11174 407 KINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGL 486 (588)
T ss_pred EECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCC
Confidence 9998 4899999999999999999999965 7888999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEec
Q 000438 771 SGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSG 850 (1510)
Q Consensus 771 SGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g 850 (1510)
|||||||++||||++++|+|+||||||||||++++++|.+ .+....+++|+|+|||+++.++.||+|++|++|+|+++|
T Consensus 487 SGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~-~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G 565 (588)
T PRK11174 487 SVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQ-ALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQG 565 (588)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHH-HHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999999999999999986 455556899999999999999999999999999999999
Q ss_pred ChHHHHhcCcchHHHHHHh
Q 000438 851 RYNALLNSGMDFGALVAAH 869 (1510)
Q Consensus 851 ~~~~l~~~~~~f~~l~~~~ 869 (1510)
+++|++++++.|.++...+
T Consensus 566 ~~~eL~~~~~~y~~l~~~q 584 (588)
T PRK11174 566 DYAELSQAGGLFATLLAHR 584 (588)
T ss_pred CHHHHHhcchHHHHHHHHh
Confidence 9999999888888887653
No 35
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.3e-70 Score=617.54 Aligned_cols=490 Identities=22% Similarity=0.340 Sum_probs=407.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHH-HHHHh
Q 000438 1008 AYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFII-TCQYA 1086 (1510)
Q Consensus 1008 ~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v-~~~~~ 1086 (1510)
..++...+..+-+.+--+.|.++.+..+.|.-+..+|-+..-......-++..+...+...+-..+-+....++ ...++
T Consensus 3 ~~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~ 82 (497)
T COG5265 3 DRLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYG 82 (497)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcc
Confidence 34566677778888888899999999999998877775544444444444444444444444444444333333 34567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHH
Q 000438 1087 WPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHN 1166 (1510)
Q Consensus 1087 ~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~ 1166 (1510)
|++..+.+..+++|.++...-....-..+|.-..+-+..++.-.+++-+-.|++.|+.|+.+..++.+.++.+.++....
T Consensus 83 ~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~ 162 (497)
T COG5265 83 WWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKV 162 (497)
T ss_pred cHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHH
Confidence 77777766666666554433333233444444455556667788999999999999999999999999999999988888
Q ss_pred HhHhhHHHHHHHHHHHHHHHHHHHH-HHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcC
Q 000438 1167 NGSNEWLGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEI 1245 (1510)
Q Consensus 1167 ~~~~~wl~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~ 1245 (1510)
..+-.||++.-..+........... ...+..+.++.|..-....|..+++.+++.+-..+.++.+.....|++.+..+.
T Consensus 163 ~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~ 242 (497)
T COG5265 163 HVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDV 242 (497)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhcc
Confidence 7777788776665544332222221 223456788999999999999999999999999999999999999999988877
Q ss_pred cccccccccCCCCCCCCC-CCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCc
Q 000438 1246 PSEAAWKMEDRLPPPNWP-AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGG 1324 (1510)
Q Consensus 1246 ~~E~~~~~~~~~~~~~wp-~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G 1324 (1510)
+.|-.. ....|+-|| ..|.|.|+||+|.|.++.| +|+|+||++++|+++||||++|+||||+.++|+|+|++++|
T Consensus 243 ~~~v~d---~pda~~L~~~~~g~v~F~~V~F~y~~~r~-iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 243 EAEVSD---APDAPPLWPVRLGAVAFINVSFAYDPRRP-ILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred chhhcc---CCCCccccccccceEEEEEEEeeccccch-hhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 766432 223455574 4688999999999998765 99999999999999999999999999999999999999999
Q ss_pred EEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCC
Q 000438 1325 RIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGD 1403 (1510)
Q Consensus 1325 ~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~ 1403 (1510)
.|.|||+||..+..+.||+.||+||||.+||+.|+..|+...+ ..+++|++.|++.++++++|+++|+||||.|||.|-
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 9999999999999999999999999999999999999998654 689999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEe
Q 000438 1404 NWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1404 nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~ 1483 (1510)
.||||||||+++||++||+|+||+||||||+||..||+.||.+|++..+++|.++|||||+||.|+|.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhHHhcCCcHHHHHHH
Q 000438 1484 GKPSRLLERPSLFGALVQ 1501 (1510)
Q Consensus 1484 gsp~~Ll~~~~~f~~lv~ 1501 (1510)
|+|++|+++.|.|++||.
T Consensus 479 g~h~~ll~~~g~ya~mw~ 496 (497)
T COG5265 479 GTHEELLAAGGLYAEMWR 496 (497)
T ss_pred CcHHHHHHcCChHHHHhc
Confidence 999999999999999985
No 36
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.1e-69 Score=647.09 Aligned_cols=467 Identities=26% Similarity=0.387 Sum_probs=359.8
Q ss_pred ccEEEeeeEEEccCCCC-ccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccC----CcEEEECC---------
Q 000438 643 IAVEVRDGVFSWDDENG-EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKI----SGKVKVCG--------- 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~----~G~i~~~g--------- 708 (1510)
..++++|++..|..... .++++||||+|.+||.+||+|++||||||+.++|.|..++. +|+|.++|
T Consensus 4 ~lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~ 83 (539)
T COG1123 4 PLLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSER 83 (539)
T ss_pred ceEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHH
Confidence 37899999999875533 25999999999999999999999999999999999999887 89999887
Q ss_pred --------eEEEEcCCCc-CCC--ccHHHHHhc----CCCCC-hhhHHHHHHHhchHHHHHh--cccCCcccccCCCCcc
Q 000438 709 --------TTAYVAQTSW-IQN--GTIEENILF----GLPMN-RAKYGEVVRVCCLEKDLEM--MEYGDQTEIGERGINL 770 (1510)
Q Consensus 709 --------~iayv~Q~~~-i~~--~Tv~enI~f----g~~~~-~~~~~~v~~~~~l~~dl~~--l~~gd~t~ig~~g~~L 770 (1510)
.|||++|+|+ .+| .||.+-|.- ..... ++..++++ +-++. +|+.... +..+.+|
T Consensus 84 ~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~------elL~~Vgl~~~~~~--~~yPheL 155 (539)
T COG1123 84 EMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAV------ELLEQVGLPDPERR--DRYPHQL 155 (539)
T ss_pred HHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHH------HHHHHcCCCChhhh--ccCCccc
Confidence 3899999985 233 477666642 22111 11111111 12222 2332222 5689999
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhh-cCCcEEEEEccCCCcccc-CCEEEEEeCCEEEE
Q 000438 771 SGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGA-LKGKTIILVTHQVDFLHN-VDLILVMREGMIVQ 848 (1510)
Q Consensus 771 SGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 848 (1510)
||||||||.||+||..+|+++|+||||+|||+.++.+|.+.+.+.. ..|.++|+||||++.+.+ ||+|+||++|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999998766554 358999999999999876 99999999999999
Q ss_pred ecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHHH
Q 000438 849 SGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEER 928 (1510)
Q Consensus 849 ~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~ 928 (1510)
.|+.++++++... +
T Consensus 236 ~G~~~~i~~~p~h-----------------------------p------------------------------------- 249 (539)
T COG1123 236 TGPTEEILSNPQH-----------------------------P------------------------------------- 249 (539)
T ss_pred ecCHHHHHhccCC-----------------------------c-------------------------------------
Confidence 9999988753110 0
Q ss_pred hcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Q 000438 929 ETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRA 1008 (1510)
Q Consensus 929 ~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~ 1008 (1510)
|..-+.++ .|....
T Consensus 250 ---------YT~~Ll~a-----------------------------------~p~~~~---------------------- 263 (539)
T COG1123 250 ---------YTRGLLAA-----------------------------------VPRLGD---------------------- 263 (539)
T ss_pred ---------ccHHHHhh-----------------------------------CCCccc----------------------
Confidence 00000000 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000438 1009 YFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWP 1088 (1510)
Q Consensus 1009 ~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~ 1088 (1510)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHh
Q 000438 1089 TIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNG 1168 (1510)
Q Consensus 1089 ~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~ 1168 (1510)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCccc
Q 000438 1169 SNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSE 1248 (1510)
Q Consensus 1169 ~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E 1248 (1510)
. .+ ...+.+
T Consensus 264 -----------------------------~--------------------------------------~~----~~~~~~ 272 (539)
T COG1123 264 -----------------------------E--------------------------------------KI----IRLPRR 272 (539)
T ss_pred -----------------------------c--------------------------------------cc----cccccc
Confidence 0 00 000000
Q ss_pred ccccccCCCCCCCCCCCceEEEEEEEEEecC---------CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccc
Q 000438 1249 AAWKMEDRLPPPNWPAHGNVDLIDLQVRYRS---------NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLV 1319 (1510)
Q Consensus 1249 ~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~---------~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ 1319 (1510)
. +. +..--++++|++.+|.. +...+++||||++++||.+||||.||||||||.++|+|++
T Consensus 273 ~--------~~---~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~ 341 (539)
T COG1123 273 G--------PL---RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLL 341 (539)
T ss_pred c--------cc---ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCC
Confidence 0 00 01225788999999974 1246899999999999999999999999999999999999
Q ss_pred CCCCcEEEEcCee--CCCCCHHHhhcceEEecCcccc--C-cccHHHhcC-CCCC---C----CHHHHHHHHHHcCchH-
Q 000438 1320 EPSGGRIIIDGID--ISLLGLHDLRSRFGIIPQEPVL--F-EGTVRSNID-PIGQ---Y----SDEEIWKSLERCQLKD- 1385 (1510)
Q Consensus 1320 ep~~G~I~IDG~d--I~~i~l~~LR~~i~iIpQdp~L--F-~gTIR~NLd-p~~~---~----sd~eI~~aL~~~~L~~- 1385 (1510)
+|++|+|.++|.| .+.-....+|+++-+|.|||.- - ..||+++|. |..- . ..+.+-+.|++++|..
T Consensus 342 ~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~~ 421 (539)
T COG1123 342 PPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPPE 421 (539)
T ss_pred CCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCHH
Confidence 9999999999977 3333355678899999999963 2 459999995 4321 1 2245788899999986
Q ss_pred HHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecCh
Q 000438 1386 VVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRI 1463 (1510)
Q Consensus 1386 ~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl 1463 (1510)
+..+.|. .||||||||+||||||..+|++||+|||||+||+-+.+.|.+.|.+.-+ +.|.|.|+|++
T Consensus 422 ~l~ryP~-----------elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl 490 (539)
T COG1123 422 FLDRYPH-----------ELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDL 490 (539)
T ss_pred HHhcCch-----------hcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCH
Confidence 4555554 5799999999999999999999999999999999999999999987653 68999999999
Q ss_pred hhhhh-cCEEEEEeCCEEEEecChhHHhcCC-cHHHHHHHH
Q 000438 1464 PTVMD-CDRVIVVDAGWAKEFGKPSRLLERP-SLFGALVQE 1502 (1510)
Q Consensus 1464 ~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~-~~f~~lv~~ 1502 (1510)
+.++. ||||+||++|+|||.|+.+++.+++ -.|.+...+
T Consensus 491 ~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 491 AVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred HHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHH
Confidence 99998 9999999999999999999999987 666665544
No 37
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.8e-67 Score=664.89 Aligned_cols=528 Identities=17% Similarity=0.173 Sum_probs=416.4
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhccccCC-CCCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 953 AVLLLSVAWQGSLMAGDYWLSYETSEDH-SMSFN-PSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSI 1030 (1510)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~i 1030 (1510)
..+++.++..++.++.++.+....|... ..... ...+..+++++.++..++.+++.++....+.+....++.++++++
T Consensus 10 ~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l 89 (544)
T TIGR01842 10 IVGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAAS 89 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455556666666776665554211 11111 122344555556667788888899999999999999999999999
Q ss_pred hcCCccccccccchhHHHHHhhhHhHhhhhhHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1031 LHAPMSFFDTTPSGRILSRASTDQTNIDLFLPF-FVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLS 1109 (1510)
Q Consensus 1031 l~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~ 1109 (1510)
++.|+.. .|..++++.+|++.+...+.. .+..++...+.++. +++++..+|++.++++..+++.+.+..++.+
T Consensus 90 l~~~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~ 163 (544)
T TIGR01842 90 FSATLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIY-LLVCFLLHPWIGILALGGAVVLVGLALLNNR 163 (544)
T ss_pred hcCcccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHhhH
Confidence 9999843 367789999999999887665 34444444444433 4566777887665443333333333333333
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHH-
Q 000438 1110 TSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLA- 1188 (1510)
Q Consensus 1110 ~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~- 1188 (1510)
..+...+......+...+++.|+++|+.+||+|+.++.+.+++.+..++..+.................++..+...++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (544)
T TIGR01842 164 ATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVL 243 (544)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555667778899999999999999999999999888887777666554443333333333333332222221
Q ss_pred HHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceE
Q 000438 1189 TLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNV 1268 (1510)
Q Consensus 1189 ~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I 1268 (1510)
.+.......+.+++|.+...+.|...+...+..+...+..+.....+.+|+.++.+.++|.+. ....+ +..+.|
T Consensus 244 ~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~---~~~~~---~~~~~i 317 (544)
T TIGR01842 244 GLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP---AMPLP---EPEGHL 317 (544)
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC---CCCCC---CCCCeE
Confidence 222233456789999988888898899999999999999999999999999999987655321 11111 234689
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEe
Q 000438 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGII 1348 (1510)
Q Consensus 1269 ~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iI 1348 (1510)
+++||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|++++++
T Consensus 318 ~~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v 397 (544)
T TIGR01842 318 SVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYL 397 (544)
T ss_pred EEEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEe
Confidence 99999999986556799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccCcccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000438 1349 PQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1510)
Q Consensus 1349 pQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILi 1427 (1510)
||||.+|++|+|||+..++ +++|++++++++.++++++++++|+|+||.++|+|.+||||||||++||||++++|+|||
T Consensus 398 ~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ili 477 (544)
T TIGR01842 398 PQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVV 477 (544)
T ss_pred cCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998654 489999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcC
Q 000438 1428 MDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1428 LDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
||||||+||++|++.|.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|++|+++
T Consensus 478 lDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 478 LDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred EeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 999999999999999999999875 67999999999999999999999999999999999999863
No 38
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.8e-67 Score=718.71 Aligned_cols=512 Identities=17% Similarity=0.231 Sum_probs=418.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHH
Q 000438 988 LFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGI 1067 (1510)
Q Consensus 988 ~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~ 1067 (1510)
.+...+++++++..++.+++.++....+.+...+++.+++++++++|++|||..+.|++.+|++.|++.+...+...+..
T Consensus 98 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~ 177 (1466)
T PTZ00265 98 DIIFSLVLIGIFQFILSFISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFIT 177 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677778888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHH
Q 000438 1068 TVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTT 1147 (1510)
Q Consensus 1068 ~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~ 1147 (1510)
++..++.+++.++++++.+|.+.++++.++++++.+..++.+..+...+......+...+.+.|+++|++|||+|+.|++
T Consensus 178 ~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~ 257 (1466)
T PTZ00265 178 IFTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKT 257 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHH
Confidence 99999999999999999999988776655555555555555555555666666667888999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHHHH-HHhcc--------CccChhHHHHHHHHHHHHHHH
Q 000438 1148 FYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFM-ILLPS--------SIIKPENVGLSLSYGLSLNGV 1218 (1510)
Q Consensus 1148 f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~-v~~~~--------~~~~~g~~Gl~l~y~l~l~~~ 1218 (1510)
+.+++.+..+...+..+.......+......++..+..+++.++. ..+.. +.+++|.+...+.+.+.....
T Consensus 258 ~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~ 337 (1466)
T PTZ00265 258 ILKKFNLSEKLYSKYILKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFM 337 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHH
Confidence 999998877776665544443333322222332222222222221 11112 124444433333333332333
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEEEEEEecCCC-CcceeeeeEEEeCCcE
Q 000438 1219 LFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNT-PLVLKGITLSIHGGEK 1297 (1510)
Q Consensus 1219 l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~-~~vLk~is~~I~~Gek 1297 (1510)
+..+...+..+.....|.+|+.+..+.+++.+.. .+ ....|..+.|+|+||+|+|+... .++|+|+||+|++||+
T Consensus 338 l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~-~~---~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~ 413 (1466)
T PTZ00265 338 LTIILPNITEYMKSLEATNSLYEIINRKPLVENN-DD---GKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKT 413 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC-CC---CccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCE
Confidence 3445556778889999999999999876653211 11 11123345899999999997542 3699999999999999
Q ss_pred EEEECCCCCCHHHHHHHHhcccCCCCcEEEE-cCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCC---------
Q 000438 1298 IGVVGRTGSGKSTLIQVFFRLVEPSGGRIII-DGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG--------- 1367 (1510)
Q Consensus 1298 vgIVGrTGSGKSTLl~~L~rl~ep~~G~I~I-DG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~--------- 1367 (1510)
+||||+||||||||+++|.|+|+|++|+|+| ||.|+++++++++|++|++|||+|.||++||++||....
T Consensus 414 vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~ 493 (1466)
T PTZ00265 414 YAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEAL 493 (1466)
T ss_pred EEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchh
Confidence 9999999999999999999999999999999 579999999999999999999999999999999996421
Q ss_pred -------------------------------------------------CCCHHHHHHHHHHcCchHHHHhCcCCccccc
Q 000438 1368 -------------------------------------------------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLV 1398 (1510)
Q Consensus 1368 -------------------------------------------------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v 1398 (1510)
..+|+++++|++++++++++.++|+||||.+
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~v 573 (1466)
T PTZ00265 494 SNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLV 573 (1466)
T ss_pred ccccccccccccccccccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCcee
Confidence 3578999999999999999999999999999
Q ss_pred cCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhhcCEEEEEe
Q 000438 1399 ADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMDCDRVIVVD 1476 (1510)
Q Consensus 1399 ~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~~DrIlVL~ 1476 (1510)
+++|.+||||||||++|||||+++|+|||||||||+||+++++.|++.|++.. +++|+|+||||++++..||+|+||+
T Consensus 574 g~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~ 653 (1466)
T PTZ00265 574 GSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLS 653 (1466)
T ss_pred CCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999875 4799999999999999999999999
Q ss_pred CC-----------------------------------------------EEEEecChhHHhcC-CcHHHHHHHHH
Q 000438 1477 AG-----------------------------------------------WAKEFGKPSRLLER-PSLFGALVQEY 1503 (1510)
Q Consensus 1477 ~G-----------------------------------------------~ivE~gsp~~Ll~~-~~~f~~lv~~~ 1503 (1510)
+| +|+|+|+|+||+++ +|.|+.|++..
T Consensus 654 ~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q 728 (1466)
T PTZ00265 654 NRERGSTVDVDIIGEDPTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQ 728 (1466)
T ss_pred CCccccccccccccccccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhh
Confidence 86 59999999999985 59999999654
No 39
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.5e-66 Score=624.93 Aligned_cols=546 Identities=21% Similarity=0.259 Sum_probs=427.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 321 TLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSG-KSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGML 399 (1510)
Q Consensus 321 al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~r 399 (1510)
.+.+..|+.+..+.++.++.......-|.++.++++-+.. .+.. ..-.-....|....++++++..-..+..+..+.|
T Consensus 140 ~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~-~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~r 218 (716)
T KOG0058|consen 140 GLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSA-DALKRACTILLGLFLIGALANAIRGGLLQYAGER 218 (716)
T ss_pred HHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445578888888888899988889999999999998866 2221 1111123334444555666665555556666666
Q ss_pred HHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 000438 400 IRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGA-SVITTVVG 477 (1510)
Q Consensus 400 iR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~-s~l~gl~~ 477 (1510)
+-..+...+|++.|+..-+-.+++.+||++|.++.|++-+.+.+. ++.+..-..+|.+.++.+++. +.| -+++.+++
T Consensus 219 v~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~-~S~~Ltlv~~i~ 297 (716)
T KOG0058|consen 219 VVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFS-LSWRLTLVTLIV 297 (716)
T ss_pred HHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh-hhHHHHHHHHHH
Confidence 666777788999999998889999999999999999999998864 566666666777777776653 222 22223333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 478 IIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIV 557 (1510)
Q Consensus 478 ~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~ 557 (1510)
+.+++.+..+++++.++..++...+..+-.+...|.|++||+|+.|+-|+.-.++-.+.=++-++.-+|-....++....
T Consensus 298 ~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~ 377 (716)
T KOG0058|consen 298 VPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGS 377 (716)
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhH
Confidence 33333444555666666666656666666778889999999999999998755554332222222223322222221111
Q ss_pred --HHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccc
Q 000438 558 --MWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVER 635 (1510)
Q Consensus 558 --~~~~p~~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~ 635 (1510)
+...-..++++.+|.+...++.+|++...+++.+--.+..++..+....+.++++.-+.+|+.+|++.++.-+..-..
T Consensus 378 ~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G~~ 457 (716)
T KOG0058|consen 378 TNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLTGTL 457 (716)
T ss_pred HHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCCcc
Confidence 111223566777888888899999999999999999999999999999999999999999999999976543322111
Q ss_pred cCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------
Q 000438 636 VEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------- 708 (1510)
Q Consensus 636 ~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------- 708 (1510)
.|. .-.+.|+++|++|+||..++.++|+|+||+|+|||.||+|||+||||||+.+.|+..|+|++|+|.++|
T Consensus 458 ~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~ 536 (716)
T KOG0058|consen 458 APD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDIN 536 (716)
T ss_pred ccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcC
Confidence 222 345789999999999998888999999999999999999999999999999999999999999999999
Q ss_pred ------eEEEEcCCCcCCCccHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHH
Q 000438 709 ------TTAYVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1510)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1510)
+||+|.|+|-+|++||+|||.+|.+. +.+...++.+.+..++.+..+|+|++|.+||+|..||||||||||||
T Consensus 537 ~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIA 616 (716)
T KOG0058|consen 537 HKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIA 616 (716)
T ss_pred HHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHH
Confidence 38999999999999999999999873 34555667777788889999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcC-c
Q 000438 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSG-M 860 (1510)
Q Consensus 782 Ral~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~-~ 860 (1510)
|||++||.|+||||.|||||++.+. +.++.+....+++|||+|.|+++.+++||+|+|+++|+++|.|+++|+++.. +
T Consensus 617 RALlr~P~VLILDEATSALDaeSE~-lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~g 695 (716)
T KOG0058|consen 617 RALLRNPRVLILDEATSALDAESEY-LVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSKPNG 695 (716)
T ss_pred HHHhcCCCEEEEechhhhcchhhHH-HHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhCccc
Confidence 9999999999999999999999754 5577888888899999999999999999999999999999999999999876 6
Q ss_pred chHHHHHHhh
Q 000438 861 DFGALVAAHE 870 (1510)
Q Consensus 861 ~f~~l~~~~~ 870 (1510)
.|.++++.+.
T Consensus 696 ly~~Lv~~q~ 705 (716)
T KOG0058|consen 696 LYAKLVQRQL 705 (716)
T ss_pred HHHHHHHHhc
Confidence 7888887543
No 40
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-68 Score=678.62 Aligned_cols=490 Identities=24% Similarity=0.349 Sum_probs=359.6
Q ss_pred ccEEEeeeEEEccCCC-CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000438 643 IAVEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1510)
..++++|+++.|+... ..++|+||||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 4799999999996322 34799999999999999999999999999999999999999999998754
Q ss_pred --------------eEEEEcCCC--cC-CCccHHHHHhcCCCCChh-hHHHHHHHhchHHHHHhcccCC-cccccCCCCc
Q 000438 709 --------------TTAYVAQTS--WI-QNGTIEENILFGLPMNRA-KYGEVVRVCCLEKDLEMMEYGD-QTEIGERGIN 769 (1510)
Q Consensus 709 --------------~iayv~Q~~--~i-~~~Tv~enI~fg~~~~~~-~~~~v~~~~~l~~dl~~l~~gd-~t~ig~~g~~ 769 (1510)
.+|||+|+| -+ ...||+|||.++...... ...+.. ....+-++.+...+ .........+
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~--~~~~~~l~~~gL~~~~~~~~~~~~~ 168 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAM--VEAKRMLDQVRIPEAQTILSRYPHQ 168 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHH--HHHHHHHHHCCCCChhhHHhCCCcc
Confidence 379999998 34 457999999886321100 000110 11122233333222 1235677889
Q ss_pred cChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcccc-CCEEEEEeCCEEE
Q 000438 770 LSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIV 847 (1510)
Q Consensus 770 LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~ 847 (1510)
|||||||||+|||||+.+|++|||||||++||+.+++.+.+.+.+...+ |+|+|+|||+++++.. ||+|++|++|+++
T Consensus 169 LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~i~ 248 (623)
T PRK10261 169 LSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGEAV 248 (623)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCeec
Confidence 9999999999999999999999999999999999999998765554434 8999999999999865 9999999999999
Q ss_pred EecChHHHHhcCc-chHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHH
Q 000438 848 QSGRYNALLNSGM-DFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEE 926 (1510)
Q Consensus 848 ~~g~~~~l~~~~~-~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e 926 (1510)
+.|+++++.+... .+.. ... ... +...
T Consensus 249 ~~g~~~~~~~~~~~~~~~---------~l~------------------------~~~---------~~~~---------- 276 (623)
T PRK10261 249 ETGSVEQIFHAPQHPYTR---------ALL------------------------AAV---------PQLG---------- 276 (623)
T ss_pred ccCCHHHhhcCCCChhhh---------hhh------------------------hcc---------Cccc----------
Confidence 9998877643110 0000 000 000 0000
Q ss_pred HHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 000438 927 ERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVV 1006 (1510)
Q Consensus 927 ~~~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~ 1006 (1510)
. ..|. .
T Consensus 277 ~-~~~~-----------------------------------------------~-------------------------- 282 (623)
T PRK10261 277 A-MKGL-----------------------------------------------D-------------------------- 282 (623)
T ss_pred c-cccc-----------------------------------------------c--------------------------
Confidence 0 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000438 1007 RAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYA 1086 (1510)
Q Consensus 1007 ~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~ 1086 (1510)
.| +
T Consensus 283 --------------------------~~---------~------------------------------------------ 285 (623)
T PRK10261 283 --------------------------YP---------R------------------------------------------ 285 (623)
T ss_pred --------------------------CC---------c------------------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHH
Q 000438 1087 WPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHN 1166 (1510)
Q Consensus 1087 ~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~ 1166 (1510)
+.|
T Consensus 286 -----------------------------------~~~------------------------------------------ 288 (623)
T PRK10261 286 -----------------------------------RFP------------------------------------------ 288 (623)
T ss_pred -----------------------------------ccc------------------------------------------
Confidence 000
Q ss_pred HhHhhHHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCc
Q 000438 1167 NGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIP 1246 (1510)
Q Consensus 1167 ~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~ 1246 (1510)
. . + + ++- .. ..+
T Consensus 289 ------------------------------~--~-----------------------------~----~-~~~-~~-~~~ 300 (623)
T PRK10261 289 ------------------------------L--I-----------------------------S----L-EHP-AK-QEP 300 (623)
T ss_pred ------------------------------c--c-----------------------------c----c-ccc-cc-cCc
Confidence 0 0 0 0 000 00 000
Q ss_pred ccccccccCCCCCCCCCCCceEEEEEEEEEecCC---------CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhc
Q 000438 1247 SEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSN---------TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFR 1317 (1510)
Q Consensus 1247 ~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~---------~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~r 1317 (1510)
.+.. . ..+ +...-++++|++++|+.. ...+|+||||+|++||++||+|+||||||||+++|.|
T Consensus 301 ~~~~----~-~~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~G 372 (623)
T PRK10261 301 PIEQ----D-TVV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLR 372 (623)
T ss_pred cccc----c-ccc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHc
Confidence 0000 0 000 011259999999999621 1359999999999999999999999999999999999
Q ss_pred ccCCCCcEEEEcCeeCCCCCHH---HhhcceEEecCcc--ccCc-ccHHHhcCC-C---CCCC----HHHHHHHHHHcCc
Q 000438 1318 LVEPSGGRIIIDGIDISLLGLH---DLRSRFGIIPQEP--VLFE-GTVRSNIDP-I---GQYS----DEEIWKSLERCQL 1383 (1510)
Q Consensus 1318 l~ep~~G~I~IDG~dI~~i~l~---~LR~~i~iIpQdp--~LF~-gTIR~NLdp-~---~~~s----d~eI~~aL~~~~L 1383 (1510)
+.+|++|+|.+||.++...+.. .+|++|+||||+| .++. -|+++|+.. . +..+ ++++.++|+.++|
T Consensus 373 l~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL 452 (623)
T PRK10261 373 LVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGL 452 (623)
T ss_pred CCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCC
Confidence 9999999999999999877643 4677899999998 4665 499999852 1 1111 2467788999988
Q ss_pred h-HHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEe
Q 000438 1384 K-DVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIA 1460 (1510)
Q Consensus 1384 ~-~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IA 1460 (1510)
. +.....| ..||||||||++|||||+.+|+||||||||++||..+.+.|.+.|++..+ +.|||+||
T Consensus 453 ~~~~~~~~~-----------~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~is 521 (623)
T PRK10261 453 LPEHAWRYP-----------HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFIS 521 (623)
T ss_pred CHHHhhCCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 5 4444333 35899999999999999999999999999999999999999999988643 68999999
Q ss_pred cChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC-cHH-HHHHH
Q 000438 1461 HRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP-SLF-GALVQ 1501 (1510)
Q Consensus 1461 HRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~-~~f-~~lv~ 1501 (1510)
|+++.+.. ||||+||++|+|+|.|+++++++++ ..| +.++.
T Consensus 522 Hdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~ 565 (623)
T PRK10261 522 HDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMA 565 (623)
T ss_pred CCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHh
Confidence 99999987 9999999999999999999999876 444 34544
No 41
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=5.3e-65 Score=665.28 Aligned_cols=541 Identities=19% Similarity=0.212 Sum_probs=446.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 320 TTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGML 399 (1510)
Q Consensus 320 ~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~r 399 (1510)
+..++.+++.++...+..++..++..+.|++++.+++.+...... ...+.++++++++.++..++.....+...+++.+
T Consensus 146 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (710)
T TIGR03796 146 WRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQ-DWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIK 224 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555677777788888888999999999999999976533321 1233455556666677777777777888899999
Q ss_pred HHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 400 IRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVGI 478 (1510)
Q Consensus 400 iR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~ 478 (1510)
+...+...+|+|.++++.....++++|+++|.++.| +++.+++. .+..+....+.+++.+++++..-++-+++.++.+
T Consensus 225 ~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 303 (710)
T TIGR03796 225 LAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFA 303 (710)
T ss_pred HHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888889999999999988 67887754 3444455555555555555544444555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 479 IGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVM 558 (1510)
Q Consensus 479 ~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~ 558 (1510)
++.+.+..++.+...+..++.++..+++.+.+.|.++|+++||.+++|+.+.++..+.+.++.+...+.....+....+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (710)
T TIGR03796 304 AINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLP 383 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666667778888888899999999999999999999999999999999999999888887776665554444333222
Q ss_pred HHHHH--HHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccc---
Q 000438 559 WSTPV--LISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESV--- 633 (1510)
Q Consensus 559 ~~~p~--~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~--- 633 (1510)
..... .+.++.++.+...++.+|.+.++++..++..+..|+..++..+..+.+++++++|+.++++.++..+...
T Consensus 384 ~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~ 463 (710)
T TIGR03796 384 TLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEA 463 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccc
Confidence 22222 2334567777778889999999999999999999999999999999999999999999998754322111
Q ss_pred -c--ccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--
Q 000438 634 -E--RVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-- 708 (1510)
Q Consensus 634 -~--~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-- 708 (1510)
. ..+.......|+++|++|+|++. ++++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 464 ~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~ 542 (710)
T TIGR03796 464 PAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIP 542 (710)
T ss_pred cccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEe
Confidence 0 01101123579999999999753 45799999999999999999999999999999999999999999999998
Q ss_pred -----------eEEEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHH
Q 000438 709 -----------TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQ 776 (1510)
Q Consensus 709 -----------~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 776 (1510)
.++||||+|+++++||+|||.++.+ .++++..++++.+++.+++..+|.|.+|.+||+|.+|||||||
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQ 622 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQ 622 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHH
Confidence 3899999999999999999998864 6778888999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHH
Q 000438 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALL 856 (1510)
Q Consensus 777 Rv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~ 856 (1510)
||+||||++++|+|+|||||||+||+++++++++.+.+ +++|+|+|||+++.++.||+|++|++|+|++.|+++|++
T Consensus 623 RiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll 699 (710)
T TIGR03796 623 RLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELW 699 (710)
T ss_pred HHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHH
Confidence 99999999999999999999999999999999987654 589999999999999999999999999999999999999
Q ss_pred hcCcchHHHH
Q 000438 857 NSGMDFGALV 866 (1510)
Q Consensus 857 ~~~~~f~~l~ 866 (1510)
+.++.|.+++
T Consensus 700 ~~~~~y~~l~ 709 (710)
T TIGR03796 700 AVGGAYARLI 709 (710)
T ss_pred HcCCcHHHHh
Confidence 8888887764
No 42
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.3e-64 Score=658.70 Aligned_cols=542 Identities=22% Similarity=0.238 Sum_probs=442.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 317 PVRTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKL 396 (1510)
Q Consensus 317 ~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~ 396 (1510)
.+++..++.+++.++...++.++..++..+.|++++.+++.+-.... ...-+.++++++++.++..++.....+...++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (686)
T TIGR03797 125 DLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD-RSLLVQIALALLAAAVGAAAFQLAQSLAVLRL 203 (686)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555566778888888889999999999999999999997653221 12223445556666666777777777778899
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 397 GMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQL--HAVWLMPLQISVALILLYNCLGASVITT 474 (1510)
Q Consensus 397 g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~~--~~~w~~plqi~lal~lL~~~lG~s~l~g 474 (1510)
+.++...+...+|+|.++++.....++++|+++|.++ |++.+.+++... ..+...++ +++++++++..-++.+++.
T Consensus 204 ~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~li~ 281 (686)
T TIGR03797 204 ETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIF-ALLNLGLMFYYSWKLALVA 281 (686)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998888899999999997 899998876432 33333333 3344444544444555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 475 VVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGN 554 (1510)
Q Consensus 475 l~~~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~ 554 (1510)
++++++.+.+..++.+..++..++.++..+++.+...|.++|+++||.++.|+.+.++.++.-++..+...+........
T Consensus 282 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (686)
T TIGR03797 282 VALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLL 361 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555566667778888899999999999999999999999999999999999988887776555444444433333332
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccc
Q 000438 555 IIVMWSTPVL--ISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNES 632 (1510)
Q Consensus 555 ~~~~~~~p~~--v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~ 632 (1510)
..+......+ +.++.++.+...++.+|.+.++++.+++..+..|+..++..+..+.+++++++|+.++++.++..+..
T Consensus 362 ~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 441 (686)
T TIGR03797 362 TVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA 441 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 2222222222 23345666666788899999999999999999999999999999999999999999999875432211
Q ss_pred ccccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----
Q 000438 633 VERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---- 708 (1510)
Q Consensus 633 ~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---- 708 (1510)
. .........|+++|++|+|+++ ++++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.++|
T Consensus 442 ~--~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~ 518 (686)
T TIGR03797 442 K--TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLA 518 (686)
T ss_pred c--CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcC
Confidence 1 1111123579999999999743 46799999999999999999999999999999999999999999999998
Q ss_pred ---------eEEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHH
Q 000438 709 ---------TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 779 (1510)
Q Consensus 709 ---------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 779 (1510)
.++||||+|+++++||+|||.+|.|.+++...++++.+++.++++.+|.|.+|.+||+|.+||||||||++
T Consensus 519 ~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRia 598 (686)
T TIGR03797 519 GLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLL 598 (686)
T ss_pred cCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHH
Confidence 37999999999999999999999888888889999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcC
Q 000438 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSG 859 (1510)
Q Consensus 780 LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~ 859 (1510)
||||++++|++++||||||+||+++++++++.+.+. ++|+|+|||+++.++.||+|++|++|+|++.|+++|+++.+
T Consensus 599 lARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~~ 675 (686)
T TIGR03797 599 IARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMARE 675 (686)
T ss_pred HHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999998775442 68999999999999999999999999999999999999988
Q ss_pred cchHHHHH
Q 000438 860 MDFGALVA 867 (1510)
Q Consensus 860 ~~f~~l~~ 867 (1510)
+.|.++..
T Consensus 676 ~~y~~l~~ 683 (686)
T TIGR03797 676 GLFAQLAR 683 (686)
T ss_pred cHHHHHHH
Confidence 88888765
No 43
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.9e-64 Score=637.51 Aligned_cols=548 Identities=22% Similarity=0.283 Sum_probs=454.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 317 PVRTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKL 396 (1510)
Q Consensus 317 ~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~ 396 (1510)
+.++..++-+|+.+.-..+..++..++..+.|++.+.++|.+--..+ ...=..+++++.+..+.+.++...-.|....+
T Consensus 143 ~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~-~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~ 221 (709)
T COG2274 143 SWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS-RSTLTVLAIGLLLAALFEALLRLLRTYLIAHL 221 (709)
T ss_pred HhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555577777777788888999999999999999997754332 22235567777888888888888888888899
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 397 GMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQ-LHAVWLMPLQISVALILLYNCLGASVITTV 475 (1510)
Q Consensus 397 g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~-~~~~w~~plqi~lal~lL~~~lG~s~l~gl 475 (1510)
+.|+...+...+|+|.|+|+....+++++||+++.++ |.++|.+++.. +-.+.+-.+-.++.+.+++..-++-+++++
T Consensus 222 ~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l 300 (709)
T COG2274 222 GKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVL 300 (709)
T ss_pred HHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999986 89999998753 222222222233334455555566677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 476 VGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNI 555 (1510)
Q Consensus 476 ~~~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~ 555 (1510)
+.+++.+.+..++.+..++.-++.++...++-+...|.++||++||..+-|+.|..+.++.=.+.++.-.+.........
T Consensus 301 ~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 380 (709)
T COG2274 301 AAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILN 380 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 77777777788888889999999999999999999999999999999999999998887776666665555444443333
Q ss_pred HHHHHHHHH--HHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccc
Q 000438 556 IVMWSTPVL--ISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESV 633 (1510)
Q Consensus 556 ~~~~~~p~~--v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~ 633 (1510)
........+ +.+++||++..+++.+|.|..+++-++...+..|+..+.+....+.+++++.+|+.+.++.|..++...
T Consensus 381 ~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~ 460 (709)
T COG2274 381 TIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDK 460 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 322222222 456789999999999999999999999999999999999999999999999999999999865433211
Q ss_pred cccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----
Q 000438 634 ERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----- 708 (1510)
Q Consensus 634 ~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----- 708 (1510)
........++.|+++|++|.|+.++ .++|+|+||+|++||.+||+|+||||||||+|.|+|.++|++|+|.++|
T Consensus 461 ~~~~~~~~~g~I~~~nvsf~y~~~~-~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~ 539 (709)
T COG2274 461 TLIHLPKLQGEIEFENVSFRYGPDD-PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLND 539 (709)
T ss_pred ccccccccCceEEEEEEEEEeCCCC-cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHh
Confidence 1111222457899999999998653 4799999999999999999999999999999999999999999999999
Q ss_pred --------eEEEEcCCCcCCCccHHHHHhcCCCCCh-hhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHH
Q 000438 709 --------TTAYVAQTSWIQNGTIEENILFGLPMNR-AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 779 (1510)
Q Consensus 709 --------~iayv~Q~~~i~~~Tv~enI~fg~~~~~-~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 779 (1510)
.++||+|++.++++||+|||.+|.|... +...++++..+.++++..+|.|.+|.+||+|.+||||||||++
T Consensus 540 i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrla 619 (709)
T COG2274 540 IDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLA 619 (709)
T ss_pred cCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHH
Confidence 4899999999999999999999998654 4444555556788999999999999999999999999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcC
Q 000438 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSG 859 (1510)
Q Consensus 780 LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~ 859 (1510)
||||++++|+|+||||||||||+++++.|.+.+. ...+|+|+|+|||+++.+..||+|+||++|+|+++|+++|+++.+
T Consensus 620 lARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~-~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~~~ 698 (709)
T COG2274 620 LARALLSKPKILLLDEATSALDPETEAIILQNLL-QILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLAQG 698 (709)
T ss_pred HHHHhccCCCEEEEeCcccccCHhHHHHHHHHHH-HHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHHhc
Confidence 9999999999999999999999999999987754 455789999999999999999999999999999999999999999
Q ss_pred cchHHHHHH
Q 000438 860 MDFGALVAA 868 (1510)
Q Consensus 860 ~~f~~l~~~ 868 (1510)
+.|..+...
T Consensus 699 g~y~~l~~~ 707 (709)
T COG2274 699 GLYARLYQQ 707 (709)
T ss_pred ChHHHHHhc
Confidence 888887653
No 44
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3e-67 Score=663.18 Aligned_cols=451 Identities=26% Similarity=0.424 Sum_probs=347.5
Q ss_pred cEEEeeeEEEccCC-CCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC---------
Q 000438 644 AVEVRDGVFSWDDE-NGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG--------- 708 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~-~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g--------- 708 (1510)
.++++|++++|+.. ..+++|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 58999999999632 135799999999999999999999999999999999999986 799998865
Q ss_pred --------eEEEEcCCCc--C-CCccHHHHHhcCCC----CChh-hHHHHHHHhchHHHHHhcccCCc-ccccCCCCccC
Q 000438 709 --------TTAYVAQTSW--I-QNGTIEENILFGLP----MNRA-KYGEVVRVCCLEKDLEMMEYGDQ-TEIGERGINLS 771 (1510)
Q Consensus 709 --------~iayv~Q~~~--i-~~~Tv~enI~fg~~----~~~~-~~~~v~~~~~l~~dl~~l~~gd~-t~ig~~g~~LS 771 (1510)
.++|++|++. + ...|+++|+.++.. .... ..++ ..+-++.+...+. .....+..+||
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~gl~~~~~~~~~~~~~LS 158 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGE------ILNCLDRVGIRQAAKRLTDYPHQLS 158 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHH------HHHHHHHCCCCChHHHHhhCCcccC
Confidence 3799999984 3 34699999875321 1111 1111 1222333322221 12356788999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcccc-CCEEEEEeCCEEEEe
Q 000438 772 GGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQS 849 (1510)
Q Consensus 772 GGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~ 849 (1510)
|||||||+|||||+.+|+++||||||++||+...+.+.+.+.+...+ |+|+|+|||+++++.. ||+|++|++|++++.
T Consensus 159 gGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~ 238 (529)
T PRK15134 159 GGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVEQ 238 (529)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999998766554443 8999999999999865 999999999999988
Q ss_pred cChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHHHh
Q 000438 850 GRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERE 929 (1510)
Q Consensus 850 g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~ 929 (1510)
|+++++.+... . .
T Consensus 239 g~~~~~~~~~~-----------------------------------------------------~------~-------- 251 (529)
T PRK15134 239 NRAATLFSAPT-----------------------------------------------------H------P-------- 251 (529)
T ss_pred CCHHHHhhCCC-----------------------------------------------------C------H--------
Confidence 87655431000 0 0
Q ss_pred cCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 000438 930 TGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAY 1009 (1510)
Q Consensus 930 ~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~ 1009 (1510)
+.+..
T Consensus 252 -----------~~~~~---------------------------------------------------------------- 256 (529)
T PRK15134 252 -----------YTQKL---------------------------------------------------------------- 256 (529)
T ss_pred -----------HHHHH----------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000438 1010 FVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPT 1089 (1510)
Q Consensus 1010 ~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 1089 (1510)
+. .+
T Consensus 257 -----------------~~----~~------------------------------------------------------- 260 (529)
T PRK15134 257 -----------------LN----SE------------------------------------------------------- 260 (529)
T ss_pred -----------------HH----hC-------------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhH
Q 000438 1090 IFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGS 1169 (1510)
Q Consensus 1090 ~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~ 1169 (1510)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccc
Q 000438 1170 NEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEA 1249 (1510)
Q Consensus 1170 ~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~ 1249 (1510)
. + .++..
T Consensus 261 --------------------------~-----------------------------------------~------~~~~~ 267 (529)
T PRK15134 261 --------------------------P-----------------------------------------S------GDPVP 267 (529)
T ss_pred --------------------------c-----------------------------------------c------ccccc
Confidence 0 0 00000
Q ss_pred cccccCCCCCCCCCCCceEEEEEEEEEecC---------CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC
Q 000438 1250 AWKMEDRLPPPNWPAHGNVDLIDLQVRYRS---------NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE 1320 (1510)
Q Consensus 1250 ~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~---------~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e 1320 (1510)
. ++. ...-++++|++++|+. +...+|+|+||+|++||++||+|+||||||||+++|.|++
T Consensus 268 ~-------~~~---~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~- 336 (529)
T PRK15134 268 L-------PEP---ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLI- 336 (529)
T ss_pred c-------CCC---CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcC-
Confidence 0 000 0114899999999952 1245999999999999999999999999999999999998
Q ss_pred CCCcEEEEcCeeCCCCCHHH---hhcceEEecCcc--ccCc-ccHHHhcCC-C--C--CCC----HHHHHHHHHHcCch-
Q 000438 1321 PSGGRIIIDGIDISLLGLHD---LRSRFGIIPQEP--VLFE-GTVRSNIDP-I--G--QYS----DEEIWKSLERCQLK- 1384 (1510)
Q Consensus 1321 p~~G~I~IDG~dI~~i~l~~---LR~~i~iIpQdp--~LF~-gTIR~NLdp-~--~--~~s----d~eI~~aL~~~~L~- 1384 (1510)
|.+|+|.+||.++...+.++ +|++++|+||+| .+|. .|+++|+.. . . ..+ ++++.++++..++.
T Consensus 337 ~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 416 (529)
T PRK15134 337 NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDP 416 (529)
T ss_pred CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCH
Confidence 58999999999998776544 477899999998 3665 499999953 1 1 111 34577888888885
Q ss_pred HHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecC
Q 000438 1385 DVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHR 1462 (1510)
Q Consensus 1385 ~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHR 1462 (1510)
+.....| .+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+
T Consensus 417 ~~~~~~~-----------~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd 485 (529)
T PRK15134 417 ETRHRYP-----------AEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHD 485 (529)
T ss_pred HHHhcCC-----------ccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCC
Confidence 3333332 36899999999999999999999999999999999999999999998643 7899999999
Q ss_pred hhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1463 IPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1463 l~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
++.+.. ||||++|++|++++.|+++++++++
T Consensus 486 ~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 517 (529)
T PRK15134 486 LHVVRALCHQVIVLRQGEVVEQGDCERVFAAP 517 (529)
T ss_pred HHHHHHhcCeEEEEECCEEEEEcCHHHHhcCC
Confidence 999986 9999999999999999999998765
No 45
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.3e-64 Score=655.63 Aligned_cols=538 Identities=19% Similarity=0.226 Sum_probs=417.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 323 LRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRC 402 (1510)
Q Consensus 323 ~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR~ 402 (1510)
++.+|+.++...++.++..++..+.|+++..+++.+..+..... -...+..+++..++..++.....+.....+.++..
T Consensus 156 ~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 234 (711)
T TIGR00958 156 SGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPA-LASAIFFMCLLSIASSVSAGLRGGSFNYTMARINL 234 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566677788888899999999999999999998864332111 01111122222223333332222233345555555
Q ss_pred HHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 403 TLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVGIIGV 481 (1510)
Q Consensus 403 ~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~~l~ 481 (1510)
.+...+|+|.++.+....++..+|+++|.++.|++.+.+.+. .+..+....+++++++++++..-+..+++.++.+++.
T Consensus 235 ~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~ 314 (711)
T TIGR00958 235 RIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLV 314 (711)
T ss_pred HHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 566788999999998888888999999999999999988764 5566666666676666666543333333334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000438 482 MIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWS- 560 (1510)
Q Consensus 482 ~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~~~- 560 (1510)
..+...+.++.++..++.++..++......|.++|+++||.|++|+.+.++..+..++-.+..++.....+....+...
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (711)
T TIGR00958 315 FLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVL 394 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456667777888888888898999999999999999999999999877776655444333222222221211111111
Q ss_pred -HHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccccCCC
Q 000438 561 -TPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGC 639 (1510)
Q Consensus 561 -~p~~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~ 639 (1510)
.-..+.++.++.+....+.++.+.+++++.++..+..|+..++..+..+.+++++.+||.+|++.++..++.....+.
T Consensus 395 ~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~- 473 (711)
T TIGR00958 395 GMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGTLAPL- 473 (711)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCC-
Confidence 111233445677777788999999999999999999999999999999999999999999999876543221111111
Q ss_pred CCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------
Q 000438 640 DDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----------- 708 (1510)
Q Consensus 640 ~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------- 708 (1510)
+....|+++|++|+|++.+++++|+|+||+|++||.++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 474 ~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l 553 (711)
T TIGR00958 474 NLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYL 553 (711)
T ss_pred CCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHH
Confidence 123569999999999865456899999999999999999999999999999999999999999999998
Q ss_pred --eEEEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHh
Q 000438 709 --TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1510)
Q Consensus 709 --~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~ 785 (1510)
+++||+|+|+++++||||||.+|.+ .+++...++++.++++++++.+|.|.+|.+||+|.+||||||||++||||++
T Consensus 554 r~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl 633 (711)
T TIGR00958 554 HRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALV 633 (711)
T ss_pred HhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHh
Confidence 4899999999999999999999975 5567788899999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcchHHH
Q 000438 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGAL 865 (1510)
Q Consensus 786 ~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l 865 (1510)
++|+|+|||||||+||+++++.+.+ ....+++|+|+|||+++.+..||+|++|++|+|++.|+++|++++++.|.++
T Consensus 634 ~~p~ILILDEpTSaLD~~te~~i~~---~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~~~y~~l 710 (711)
T TIGR00958 634 RKPRVLILDEATSALDAECEQLLQE---SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQGCYKHL 710 (711)
T ss_pred cCCCEEEEEccccccCHHHHHHHHH---hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCCCchHhc
Confidence 9999999999999999999998886 2234789999999999999999999999999999999999999887777654
No 46
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6.1e-64 Score=653.14 Aligned_cols=535 Identities=23% Similarity=0.286 Sum_probs=439.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 318 VRTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLG 397 (1510)
Q Consensus 318 l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g 397 (1510)
.++..++.+++.+....++.++..++.++.|++++.++|.+-.... ....+.+++++++..++..++.....+...+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (694)
T TIGR03375 137 WFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA-FETLWVLAIGVALAIVFDFVLKTLRSYFLDVAG 215 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455567788888888888899999999999999999997643321 222334445555556666777666677778899
Q ss_pred HHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 398 MLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQ--LHAVWLMPLQISVALILLYNCLGASVITTV 475 (1510)
Q Consensus 398 ~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~--~~~~w~~plqi~lal~lL~~~lG~s~l~gl 475 (1510)
.++...+...+|+|.++++... .+.++|++++.+ .|++.+.+++.. +..+...+. +++.+++++..-++.+++.+
T Consensus 216 ~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~li~l 292 (694)
T TIGR03375 216 KKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPF-ALLFLLVIAIIGGPLVWVPL 292 (694)
T ss_pred HHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHH-HHHHHHHHHHHHhHHHHHHH
Confidence 9999999999999999999876 677999999999 799999987653 233333444 33344444444445555566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 476 VGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNI 555 (1510)
Q Consensus 476 ~~~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~ 555 (1510)
+++++.+.+..++.++.++..++.++..+++.+.+.|.++|+++||.+++|+.+.++..+..++..+...+.....+...
T Consensus 293 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (694)
T TIGR03375 293 VAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLAT 372 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666777888889999999999999999999999999999999999999999998888777766665555444333
Q ss_pred HHHHHHHHH--HHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccc
Q 000438 556 IVMWSTPVL--ISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESV 633 (1510)
Q Consensus 556 ~~~~~~p~~--v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~ 633 (1510)
.+......+ +.++.++.+....+.+|.+.+++++.++..+..|+..++..+..+.+++++++|+.++++.++..+...
T Consensus 373 ~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~ 452 (694)
T TIGR03375 373 NFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGT 452 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 222222222 234567777777889999999999999999999999999999999999999999999998765322111
Q ss_pred cccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----
Q 000438 634 ERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----- 708 (1510)
Q Consensus 634 ~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----- 708 (1510)
...+.......|+++|++|+|+++ ++++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 453 ~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~ 531 (694)
T TIGR03375 453 RFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQ 531 (694)
T ss_pred CCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhh
Confidence 111111123579999999999743 45799999999999999999999999999999999999999999999998
Q ss_pred --------eEEEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHH
Q 000438 709 --------TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 779 (1510)
Q Consensus 709 --------~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 779 (1510)
.++||+|+|+++++||+|||.++.+ .++++..++++.+++.++++.+|.|.+|.+||+|.+||||||||++
T Consensus 532 ~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRla 611 (694)
T TIGR03375 532 IDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVA 611 (694)
T ss_pred CCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHH
Confidence 4899999999999999999999987 6788889999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000438 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 780 LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
||||++++|+++|||||||+||+++++++.+.+ ....+++|+|+|||+++.++.||+|++|++|++++.|+++|+++.
T Consensus 612 lARall~~p~iliLDE~Ts~LD~~te~~i~~~l-~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 612 LARALLRDPPILLLDEPTSAMDNRSEERFKDRL-KRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHH-HHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 999999999999999999999999999998654 445578999999999999999999999999999999999998753
No 47
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3e-65 Score=696.94 Aligned_cols=249 Identities=20% Similarity=0.329 Sum_probs=203.0
Q ss_pred HHHHHHHhHHHHHHHHhh--cCcccccccccCCCCCCCCCCCc--eEEEEEEEEEec--CCCCcceeeeeEEEeCCcEEE
Q 000438 1226 SCFVENRMVSVERIKQFT--EIPSEAAWKMEDRLPPPNWPAHG--NVDLIDLQVRYR--SNTPLVLKGITLSIHGGEKIG 1299 (1510)
Q Consensus 1226 ~~~le~~~~sveRi~~~~--~~~~E~~~~~~~~~~~~~wp~~g--~I~f~~vs~~Y~--~~~~~vLk~is~~I~~Gekvg 1299 (1510)
..+.|+++.++||..+|. +.+.|.+.......+|. ..| .++++|++++|+ ++.+.+|+|||++|+|||++|
T Consensus 717 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 793 (1394)
T TIGR00956 717 GETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEK---ESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTA 793 (1394)
T ss_pred ccccccccccccccccCCCCccccccccccccccccc---cCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEE
Confidence 346677788999998773 34444332221111221 134 479999999985 334579999999999999999
Q ss_pred EECCCCCCHHHHHHHHhcccC---CCCcEEEEcCeeCCCCCHHHhhcceEEecCcccc-CcccHHHhcCCC------CCC
Q 000438 1300 VVGRTGSGKSTLIQVFFRLVE---PSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVL-FEGTVRSNIDPI------GQY 1369 (1510)
Q Consensus 1300 IVGrTGSGKSTLl~~L~rl~e---p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~L-F~gTIR~NLdp~------~~~ 1369 (1510)
|+||||||||||+++|.|+.+ |++|+|.+||.++. .++|++++||||++.+ +..||||||+.. .+.
T Consensus 794 I~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~ 869 (1394)
T TIGR00956 794 LMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSV 869 (1394)
T ss_pred EECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCC
Confidence 999999999999999999998 78899999999985 3578999999999764 567999999731 123
Q ss_pred CHH----HHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCC-EEEEeCCCCCCCHHhHHHHH
Q 000438 1370 SDE----EIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR-LLFMDEATASVDSQTDAEIQ 1444 (1510)
Q Consensus 1370 sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~k-ILiLDEaTsslD~~Td~~Iq 1444 (1510)
+++ .+.++++..+|.+ ..|+.+++.|.+||||||||++|||||+++|+ ||+||||||+||+.+...|+
T Consensus 870 ~~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~ 942 (1394)
T TIGR00956 870 SKSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSIC 942 (1394)
T ss_pred CHHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHH
Confidence 443 3567788877754 36889998888999999999999999999997 99999999999999999999
Q ss_pred HHHHHH-cCCceEEEEecChhhh--hhcCEEEEEeCC-EEEEecChhH
Q 000438 1445 RIIREE-FAACTIISIAHRIPTV--MDCDRVIVVDAG-WAKEFGKPSR 1488 (1510)
Q Consensus 1445 ~~I~~~-f~~~TvI~IAHRl~ti--~~~DrIlVL~~G-~ivE~gsp~~ 1488 (1510)
+.|++. .+++|||+++|++++. ..||+|++|++| +++++|++.+
T Consensus 943 ~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 943 KLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 999987 4689999999999974 459999999997 9999999743
No 48
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=2.2e-64 Score=639.65 Aligned_cols=516 Identities=17% Similarity=0.139 Sum_probs=393.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000438 955 LLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAP 1034 (1510)
Q Consensus 955 ~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p 1034 (1510)
+++.++..+..++.++.++.+.+.... .....+..++++.++..++.++..++....+.+....++.++++++++.|
T Consensus 24 ~~~~~~~~~~~~~~~~~i~~~i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~ 100 (555)
T TIGR01194 24 IALGLAGGLAIIALLASINNAIHEENF---LGQGSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGAP 100 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCc---ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 334444455555566666655432110 00112233445566667788888888999999999999999999999999
Q ss_pred ccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1035 MSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSREL 1114 (1510)
Q Consensus 1035 ~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l 1114 (1510)
+.||++.++|++++|+++|++.++..+.. +..++...+.+++.++++++.+|.+.++++.++++.+.+..+..+..++.
T Consensus 101 ~~~~~~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~ 179 (555)
T TIGR01194 101 IEEIDRRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKF 179 (555)
T ss_pred HHHHHhcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988754 56666777777888888888999887765554444444443333333444
Q ss_pred HHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHH--HHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHHHH
Q 000438 1115 TRLDSITKAPVIHHFSESISGVMTIRAFGKQT--TFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFM 1192 (1510)
Q Consensus 1115 ~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~--~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~ 1192 (1510)
.+......+.+.+++.|.+.|+.+||+|+.++ ...+++.+..+...+................+++..+...+..++.
T Consensus 180 ~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (555)
T TIGR01194 180 FHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLIGCALFAA 259 (555)
T ss_pred HHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445566788999999999999999999854 3344444444444443332221111111112222111111111111
Q ss_pred HHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccc--cC-CCC--CCCCCCCce
Q 000438 1193 ILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKM--ED-RLP--PPNWPAHGN 1267 (1510)
Q Consensus 1193 v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~--~~-~~~--~~~wp~~g~ 1267 (1510)
...+.++.|.+...+.|...+..++..+...+..++....|.+|+.++.+.+.+++... ++ ... .+.....+.
T Consensus 260 --~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (555)
T TIGR01194 260 --AMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDS 337 (555)
T ss_pred --HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccCCCCce
Confidence 11256778888778888888899999999999999999999999999976432211110 00 000 011123478
Q ss_pred EEEEEEEEEecCC---CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcc
Q 000438 1268 VDLIDLQVRYRSN---TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSR 1344 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~---~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~ 1344 (1510)
|+|+||+|+|++. .+++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++
T Consensus 338 i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~ 417 (555)
T TIGR01194 338 IELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDL 417 (555)
T ss_pred EEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhh
Confidence 9999999999753 2369999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000438 1345 FGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1510)
Q Consensus 1345 i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~k 1424 (1510)
++++||||.+|++|+|+|+.| +.+|+++++++++++++++++.+|+|+||. .+||||||||++||||++++|+
T Consensus 418 i~~v~q~~~lf~~ti~~n~~~--~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRall~~~~ 490 (555)
T TIGR01194 418 FSAIFADFHLFDDLIGPDEGE--HASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAWLEDRP 490 (555)
T ss_pred CcEEccChhhhhhhhhccccc--chhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999754 578999999999999999999999999995 6899999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHH-H-cCCceEEEEecChhhhhhcCEEEEEeCCEEEEe
Q 000438 1425 LLFMDEATASVDSQTDAEIQRIIRE-E-FAACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1425 ILiLDEaTsslD~~Td~~Iq~~I~~-~-f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~ 1483 (1510)
|||||||||+||++|++.|++.+.+ . .+++|+|+||||++++..||+|+||++|+++|.
T Consensus 491 ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 491 ILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999887643 2 368999999999999999999999999999985
No 49
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-66 Score=650.74 Aligned_cols=447 Identities=21% Similarity=0.347 Sum_probs=343.3
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc--CCcEEEECCe------------
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK--ISGKVKVCGT------------ 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~--~~G~i~~~g~------------ 709 (1510)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|.
T Consensus 5 ~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFG---GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeC---CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 589999999995 35799999999999999999999999999999999999986 8999999772
Q ss_pred --EEEEcCCCcCC-CccHHHHHhcCCCCC---hhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHH
Q 000438 710 --TAYVAQTSWIQ-NGTIEENILFGLPMN---RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1510)
Q Consensus 710 --iayv~Q~~~i~-~~Tv~enI~fg~~~~---~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARa 783 (1510)
++|++|++.++ +.|++||+.++.... ....++..+ ...+-++.+... .....+..+|||||||||+||||
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~--~~~~~~~~~LSgGqkqrv~la~a 157 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL--RAQKLLAQLKLD--INPATPVGNLGLGQQQLVEIAKA 157 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH--HHHHHHHHcCCC--CCcccchhhCCHHHHHHHHHHHH
Confidence 79999998665 569999999875321 001111111 112223344332 23456778999999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhcCcch
Q 000438 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGMDF 862 (1510)
Q Consensus 784 l~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f 862 (1510)
++.+|+++||||||++||+.....+++.+.+...+|+|+|++||+++++.. ||+|++|++|+++..|+.+++..
T Consensus 158 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~----- 232 (506)
T PRK13549 158 LNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTE----- 232 (506)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCH-----
Confidence 999999999999999999999999987665554568999999999999865 99999999999987664322100
Q ss_pred HHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHHHhcCcchHHHHHHHH
Q 000438 863 GALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYC 942 (1510)
Q Consensus 863 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~ 942 (1510)
++ ..
T Consensus 233 ---------------------------------------------------------------~~-------------~~ 236 (506)
T PRK13549 233 ---------------------------------------------------------------DD-------------II 236 (506)
T ss_pred ---------------------------------------------------------------HH-------------HH
Confidence 00 00
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 943 TEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIF 1022 (1510)
Q Consensus 943 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l 1022 (1510)
....+ .
T Consensus 237 ~~~~~--------------------------------~------------------------------------------ 242 (506)
T PRK13549 237 TMMVG--------------------------------R------------------------------------------ 242 (506)
T ss_pred HHhhC--------------------------------c------------------------------------------
Confidence 00000 0
Q ss_pred HHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000438 1023 FSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYW 1102 (1510)
Q Consensus 1023 ~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~ 1102 (1510)
+
T Consensus 243 -----------~-------------------------------------------------------------------- 243 (506)
T PRK13549 243 -----------E-------------------------------------------------------------------- 243 (506)
T ss_pred -----------C--------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHH
Q 000438 1103 YRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGS 1182 (1510)
Q Consensus 1103 ~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~ 1182 (1510)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCC
Q 000438 1183 FTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNW 1262 (1510)
Q Consensus 1183 ~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~w 1262 (1510)
. .+ . .|.+. ++
T Consensus 244 ------------~-----------------------------------------~~---~--~~~~~--------~~--- 254 (506)
T PRK13549 244 ------------L-----------------------------------------TA---L--YPREP--------HT--- 254 (506)
T ss_pred ------------c-----------------------------------------cc---c--ccccc--------cC---
Confidence 0 00 0 00000 00
Q ss_pred CCCceEEEEEEEEEecC-CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-CCCcEEEEcCeeCCCCCH-H
Q 000438 1263 PAHGNVDLIDLQVRYRS-NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-PSGGRIIIDGIDISLLGL-H 1339 (1510)
Q Consensus 1263 p~~g~I~f~~vs~~Y~~-~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-p~~G~I~IDG~dI~~i~l-~ 1339 (1510)
+....|+++|++++|+. +...+|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+. +
T Consensus 255 ~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~~ 334 (506)
T PRK13549 255 IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQQ 334 (506)
T ss_pred CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHHH
Confidence 01125899999999953 22359999999999999999999999999999999999998 599999999999875543 3
Q ss_pred HhhcceEEecCcc---ccCc-ccHHHhcCCC--CC------CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCC
Q 000438 1340 DLRSRFGIIPQEP---VLFE-GTVRSNIDPI--GQ------YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGD 1403 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp---~LF~-gTIR~NLdp~--~~------~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~ 1403 (1510)
..|.+++|+||+| .+|. .|+.+|+... .. .+ .+++.++++++++.+ ...|.++ .
T Consensus 335 ~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~ 404 (506)
T PRK13549 335 AIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKT------ASPELAI----A 404 (506)
T ss_pred HHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccC------CCccccc----c
Confidence 4677899999997 3564 5999999621 11 12 134667777777631 1123333 4
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000438 1404 NWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAK 1481 (1510)
Q Consensus 1404 nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~iv 1481 (1510)
.||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|+++
T Consensus 405 ~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~ 484 (506)
T PRK13549 405 RLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLK 484 (506)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEE
Confidence 699999999999999999999999999999999999999999998753 47899999999999977 9999999999999
Q ss_pred EecChhHHh
Q 000438 1482 EFGKPSRLL 1490 (1510)
Q Consensus 1482 E~gsp~~Ll 1490 (1510)
..|+++++.
T Consensus 485 ~~~~~~~~~ 493 (506)
T PRK13549 485 GDLINHNLT 493 (506)
T ss_pred EEeccccCC
Confidence 999988764
No 50
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-66 Score=648.78 Aligned_cols=445 Identities=21% Similarity=0.337 Sum_probs=340.2
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------e
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------T 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~ 709 (1510)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|..+|++|+|.++| .
T Consensus 5 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFG---PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 589999999995 24799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEcCCCcCC-CccHHHHHhcCCCCCh---h----hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHH
Q 000438 710 TAYVAQTSWIQ-NGTIEENILFGLPMNR---A----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1510)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~~~~---~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1510)
++|++|++-++ +.|++||+.++..... . ...+..+ ....-++.+... .....+..+|||||||||+||
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~gl~--~~~~~~~~~LSgG~~qrv~ia 157 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRV--RAAMMLLRVGLK--VDLDEKVANLSISHKQMLEIA 157 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHH--HHHHHHHHcCCC--CCcccchhhCCHHHHHHHHHH
Confidence 79999998665 5699999988642100 0 0111111 112223333322 224567789999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhcCc
Q 000438 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGM 860 (1510)
Q Consensus 782 Ral~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~ 860 (1510)
||++.+|+++||||||++||+.+.+.+.+.+.+...+|+|+|+|||+++++.. ||++++|++|++++.|+++++...
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~-- 235 (510)
T PRK09700 158 KTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSND-- 235 (510)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCHH--
Confidence 99999999999999999999999999987666555568999999999999865 999999999999887765432100
Q ss_pred chHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHHHhcCcchHHHHHH
Q 000438 861 DFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKI 940 (1510)
Q Consensus 861 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~ 940 (1510)
+..
T Consensus 236 ---~~~-------------------------------------------------------------------------- 238 (510)
T PRK09700 236 ---DIV-------------------------------------------------------------------------- 238 (510)
T ss_pred ---HHH--------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 941 YCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQ 1020 (1510)
Q Consensus 941 y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~ 1020 (1510)
....+.
T Consensus 239 --~~~~~~------------------------------------------------------------------------ 244 (510)
T PRK09700 239 --RLMVGR------------------------------------------------------------------------ 244 (510)
T ss_pred --HHhcCC------------------------------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000438 1021 IFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWAN 1100 (1510)
Q Consensus 1021 ~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~ 1100 (1510)
+.
T Consensus 245 -------------~~----------------------------------------------------------------- 246 (510)
T PRK09700 245 -------------EL----------------------------------------------------------------- 246 (510)
T ss_pred -------------Cc-----------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHH
Q 000438 1101 YWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELL 1180 (1510)
Q Consensus 1101 ~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l 1180 (1510)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK09700 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCC
Q 000438 1181 GSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPP 1260 (1510)
Q Consensus 1181 ~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~ 1260 (1510)
. .+ +...++.. .++
T Consensus 247 --------------~-----------------------------------------~~---~~~~~~~~-------~~~- 260 (510)
T PRK09700 247 --------------Q-----------------------------------------NR---FNAMKENV-------SNL- 260 (510)
T ss_pred --------------c-----------------------------------------cc---cccccccc-------ccC-
Confidence 0 00 00000000 000
Q ss_pred CCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCH-H
Q 000438 1261 NWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL-H 1339 (1510)
Q Consensus 1261 ~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l-~ 1339 (1510)
+....++++|++++|. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +
T Consensus 261 --~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~~ 334 (510)
T PRK09700 261 --AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLD 334 (510)
T ss_pred --CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHHH
Confidence 0112599999998763 28999999999999999999999999999999999999999999999999876543 4
Q ss_pred HhhcceEEecCcc---ccCcc-cHHHhcCCCCC------------CC----HHHHHHHHHHcCchHHHHhCcCCcccccc
Q 000438 1340 DLRSRFGIIPQEP---VLFEG-TVRSNIDPIGQ------------YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVA 1399 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp---~LF~g-TIR~NLdp~~~------------~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~ 1399 (1510)
.+|++++|+||++ .+|.+ |+++|+..... .+ ++++.+++++.++.. +..+.++
T Consensus 335 ~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~- 407 (510)
T PRK09700 335 AVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKC------HSVNQNI- 407 (510)
T ss_pred HHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCC------CCccCcc-
Confidence 5678899999984 57765 99999863211 01 134566777776631 1233333
Q ss_pred CCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeC
Q 000438 1400 DSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDA 1477 (1510)
Q Consensus 1400 e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~ 1477 (1510)
..||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. ++.|||+|||+++.+.. ||||++|++
T Consensus 408 ---~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~ 484 (510)
T PRK09700 408 ---TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCE 484 (510)
T ss_pred ---ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEEC
Confidence 3599999999999999999999999999999999999999999998753 47899999999998876 999999999
Q ss_pred CEEEEecChhH
Q 000438 1478 GWAKEFGKPSR 1488 (1510)
Q Consensus 1478 G~ivE~gsp~~ 1488 (1510)
|++++.+++.+
T Consensus 485 G~i~~~~~~~~ 495 (510)
T PRK09700 485 GRLTQILTNRD 495 (510)
T ss_pred CEEEEEecCcc
Confidence 99999887633
No 51
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=7.8e-66 Score=649.51 Aligned_cols=445 Identities=26% Similarity=0.438 Sum_probs=339.3
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCc--ccCCcEEEEC---------------
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEM--HKISGKVKVC--------------- 707 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~--~~~~G~i~~~--------------- 707 (1510)
|+++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|.. +|++|+|.++
T Consensus 1 l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFD---GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEEC---CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 46899999995 257999999999999999999999999999999999997 7999999875
Q ss_pred --------C-----------------------eEEEEcCC-CcC-CCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHh
Q 000438 708 --------G-----------------------TTAYVAQT-SWI-QNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEM 754 (1510)
Q Consensus 708 --------g-----------------------~iayv~Q~-~~i-~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~ 754 (1510)
| .++|++|+ +.+ ...|++||+.++........++.. ....+-++.
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~--~~~~~~l~~ 155 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAV--GRAVDLIEM 155 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHH--HHHHHHHHH
Confidence 1 27999997 444 457999999875321100001110 011122333
Q ss_pred cccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccc
Q 000438 755 MEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH 833 (1510)
Q Consensus 755 l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~ 833 (1510)
+.. .........+|||||||||+||||++.+|+++||||||++||+.+.+.+.+.+.+... .|+|||+|||+++++.
T Consensus 156 ~gl--~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~~~~ 233 (520)
T TIGR03269 156 VQL--SHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPEVIE 233 (520)
T ss_pred cCC--hhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHH
Confidence 322 1223466789999999999999999999999999999999999999999876655444 4899999999999986
Q ss_pred c-CCEEEEEeCCEEEEecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccc
Q 000438 834 N-VDLILVMREGMIVQSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQ 912 (1510)
Q Consensus 834 ~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1510)
. ||+|++|++|+++..|+++++.+.
T Consensus 234 ~~~d~i~~l~~G~i~~~g~~~~~~~~------------------------------------------------------ 259 (520)
T TIGR03269 234 DLSDKAIWLENGEIKEEGTPDEVVAV------------------------------------------------------ 259 (520)
T ss_pred HhcCEEEEEeCCEEeeecCHHHHHHH------------------------------------------------------
Confidence 5 999999999999876654332100
Q ss_pred cccccCCchhhhHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHH
Q 000438 913 SNSDKGNSKLIKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGV 992 (1510)
Q Consensus 913 ~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v 992 (1510)
|.. .
T Consensus 260 ----------------------------~~~---~--------------------------------------------- 263 (520)
T TIGR03269 260 ----------------------------FME---G--------------------------------------------- 263 (520)
T ss_pred ----------------------------HHh---h---------------------------------------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHH
Q 000438 993 YGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMY 1072 (1510)
Q Consensus 993 y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~ 1072 (1510)
T Consensus 264 -------------------------------------------------------------------------------- 263 (520)
T TIGR03269 264 -------------------------------------------------------------------------------- 263 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHH
Q 000438 1073 ITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQEN 1152 (1510)
Q Consensus 1073 ~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~ 1152 (1510)
..
T Consensus 264 -----------------------------------------~~------------------------------------- 265 (520)
T TIGR03269 264 -----------------------------------------VS------------------------------------- 265 (520)
T ss_pred -----------------------------------------ch-------------------------------------
Confidence 00
Q ss_pred HHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1153 VNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENR 1232 (1510)
Q Consensus 1153 ~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~ 1232 (1510)
..+
T Consensus 266 ---------------------------------------------------------------------------~~~-- 268 (520)
T TIGR03269 266 ---------------------------------------------------------------------------EVE-- 268 (520)
T ss_pred ---------------------------------------------------------------------------hhc--
Confidence 000
Q ss_pred hHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEEEEEEecC---CCCcceeeeeEEEeCCcEEEEECCCCCCHH
Q 000438 1233 MVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRS---NTPLVLKGITLSIHGGEKIGVVGRTGSGKS 1309 (1510)
Q Consensus 1233 ~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~---~~~~vLk~is~~I~~GekvgIVGrTGSGKS 1309 (1510)
. +.. .++ ...-++++|++++|.. +...+|+|+||+|++||++||+|+||||||
T Consensus 269 -----~-------~~~--------~~~----~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKS 324 (520)
T TIGR03269 269 -----K-------ECE--------VEV----GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKT 324 (520)
T ss_pred -----c-------ccc--------cCC----CCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHH
Confidence 0 000 000 1125999999999953 234599999999999999999999999999
Q ss_pred HHHHHHhcccCCCCcEEEEc-Ce---eCCCCC---HHHhhcceEEecCccccCcc-cHHHhcCC-CC-CC----CHHHHH
Q 000438 1310 TLIQVFFRLVEPSGGRIIID-GI---DISLLG---LHDLRSRFGIIPQEPVLFEG-TVRSNIDP-IG-QY----SDEEIW 1375 (1510)
Q Consensus 1310 TLl~~L~rl~ep~~G~I~ID-G~---dI~~i~---l~~LR~~i~iIpQdp~LF~g-TIR~NLdp-~~-~~----sd~eI~ 1375 (1510)
||+++|.|+.+|++|+|.++ |. ++...+ ...+|++++|+||++.+|.. |+++|+.. +. .. .++++.
T Consensus 325 TLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 404 (520)
T TIGR03269 325 TLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAV 404 (520)
T ss_pred HHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99999999999999999996 64 344333 23567789999999988875 99999952 11 11 124567
Q ss_pred HHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--C
Q 000438 1376 KSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--A 1453 (1510)
Q Consensus 1376 ~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~ 1453 (1510)
++++.+++.+.- .++-++.++ ..||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ +
T Consensus 405 ~~l~~~~l~~~~--~~~~~~~~~----~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g 478 (520)
T TIGR03269 405 ITLKMVGFDEEK--AEEILDKYP----DELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEME 478 (520)
T ss_pred HHHHhCCCCCcc--chhhhhCCh----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC
Confidence 788888875310 000122222 36899999999999999999999999999999999999999999988643 7
Q ss_pred ceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1454 CTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1454 ~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
.|||+|+|+++.+.. ||||++|++|++++.|+|+++.+
T Consensus 479 ~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 479 QTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred cEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 899999999999987 99999999999999999988764
No 52
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=5.9e-63 Score=645.30 Aligned_cols=537 Identities=23% Similarity=0.295 Sum_probs=429.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 321 TLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLI 400 (1510)
Q Consensus 321 al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~ri 400 (1510)
..++.+++.++...++.++..++..+.|++++.++|.+-.... ...-+.+++++++..++..++.....+...+++.++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (708)
T TIGR01193 149 PLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM-MGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQRL 227 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445567777777788889999999999999999987643321 112233444455555666666666667778899999
Q ss_pred HHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 401 RCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQL--HAVWLMPLQISVALILLYNCLGASVITTVVGI 478 (1510)
Q Consensus 401 R~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~~--~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~ 478 (1510)
...+...+|+|.++++....++.+.|+++|.++ |++++.+++... ..+...+. +++.+.+++..-++.+++.++++
T Consensus 228 ~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~l~li~l~~~ 305 (708)
T TIGR01193 228 SIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWI-LVIVGLFLVRQNMLLFLLSLLSI 305 (708)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhHHHHHHHHHHH
Confidence 999999999999999999888899999999998 999998876432 22223333 33333334333233334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH
Q 000438 479 IGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYS----ISGN 554 (1510)
Q Consensus 479 ~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~----~a~~ 554 (1510)
++.+.+...+.+..++..++.++..+++.....|.++|+++||.+++|+.+.++.++..++..+.-.+.... .+..
T Consensus 306 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (708)
T TIGR01193 306 PVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIK 385 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555667788888999999999999999999999999999999999998888766655444333332222 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccc
Q 000438 555 IIVMWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVE 634 (1510)
Q Consensus 555 ~~~~~~~p~~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~ 634 (1510)
.++.... .+.++.++.+....+.+|.+.++++..++..+..|+..+...+..+.+++++++|+.++++.++..+....
T Consensus 386 ~~~~~~~--~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~ 463 (708)
T TIGR01193 386 AVTKLIL--NVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKK 463 (708)
T ss_pred HHHHHHH--HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccc
Confidence 2222222 23455678888888999999999999999999999999999999999999999999999986543221111
Q ss_pred ccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------
Q 000438 635 RVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------ 708 (1510)
Q Consensus 635 ~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------ 708 (1510)
..+.......|+++|++|+|++ ++++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.++|
T Consensus 464 ~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~ 541 (708)
T TIGR01193 464 RTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDI 541 (708)
T ss_pred ccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHc
Confidence 1111123457999999999963 35799999999999999999999999999999999999999999999998
Q ss_pred -------eEEEEcCCCcCCCccHHHHHhcCC--CCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHH
Q 000438 709 -------TTAYVAQTSWIQNGTIEENILFGL--PMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 779 (1510)
Q Consensus 709 -------~iayv~Q~~~i~~~Tv~enI~fg~--~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 779 (1510)
.++||||+|+++++||+|||.+|. ..+++...++++.+++.++++.+|.|.+|.+||+|.+||||||||++
T Consensus 542 ~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRia 621 (708)
T TIGR01193 542 DRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIA 621 (708)
T ss_pred CHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHH
Confidence 389999999999999999999983 35667788899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcC
Q 000438 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSG 859 (1510)
Q Consensus 780 LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~ 859 (1510)
||||++++|+++|||||||+||+++++++.+.+.+ .+++|+|+|||+++.+..||+|++|++|++++.|+++|+++.+
T Consensus 622 lARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~--~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~~ 699 (708)
T TIGR01193 622 LARALLTDSKVLILDESTSNLDTITEKKIVNNLLN--LQDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLDRN 699 (708)
T ss_pred HHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHH--hcCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHhcC
Confidence 99999999999999999999999999999877654 3689999999999999999999999999999999999999888
Q ss_pred cchHHHH
Q 000438 860 MDFGALV 866 (1510)
Q Consensus 860 ~~f~~l~ 866 (1510)
+.|.+++
T Consensus 700 ~~y~~l~ 706 (708)
T TIGR01193 700 GFYASLI 706 (708)
T ss_pred CcHHHHh
Confidence 8888765
No 53
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.5e-62 Score=629.37 Aligned_cols=544 Identities=20% Similarity=0.217 Sum_probs=430.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 320 TTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGML 399 (1510)
Q Consensus 320 ~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~r 399 (1510)
...++.+++.++...+..++..++..+.|++++.+++.+..++... ....++.++++..++..++.....+...+++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 95 (582)
T PRK11176 17 WPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRS-VLKWMPLVVIGLMILRGITSFISSYCISWVSGK 95 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566777777777777888888888999999998765433211 112223333334455555555555666788888
Q ss_pred HHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 400 IRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVGI 478 (1510)
Q Consensus 400 iR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~ 478 (1510)
+...+...+|+|.++++.....+.+.|+++|.++.|++++.+... .+..++..++.+++.+.+++..-++.+++.++++
T Consensus 96 ~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~ 175 (582)
T PRK11176 96 VVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIA 175 (582)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999888889999999999999999998653 4555666666666666666544334344444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 479 IGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVM 558 (1510)
Q Consensus 479 ~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~ 558 (1510)
++.+.+.....++.++..++.++..++......|.++|+++||.|++|+.+.++.++.-++-.+...+.....+....+.
T Consensus 176 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (582)
T PRK11176 176 PIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPII 255 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455556677788888888899999999999999999999999999988877776654443333333222222211111
Q ss_pred HHHH--HHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccc
Q 000438 559 WSTP--VLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERV 636 (1510)
Q Consensus 559 ~~~p--~~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~ 636 (1510)
.... ..+.++.++.+....+.++.+.+..+++++..+..|+..+...+..+.+++.+++|+.++++.++.++....
T Consensus 256 ~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-- 333 (582)
T PRK11176 256 QLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKR-- 333 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc--
Confidence 1111 122344566666677789999999999999999999999999999999999999999999986644221111
Q ss_pred CCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------
Q 000438 637 EGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------- 709 (1510)
Q Consensus 637 ~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------- 709 (1510)
+.......|+++|++|+|++. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 334 ~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~ 412 (582)
T PRK11176 334 VIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTL 412 (582)
T ss_pred CCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCH
Confidence 111123469999999999743 467999999999999999999999999999999999999999999999983
Q ss_pred ------EEEEcCCCcCCCccHHHHHhcCCC--CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHH
Q 000438 710 ------TAYVAQTSWIQNGTIEENILFGLP--MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1510)
Q Consensus 710 ------iayv~Q~~~i~~~Tv~enI~fg~~--~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1510)
++||||+|.++++||+|||.+|.+ .+++..+++++.+++.++++.+|.|.+|.+|++|.+||||||||++||
T Consensus 413 ~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LA 492 (582)
T PRK11176 413 ASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIA 492 (582)
T ss_pred HHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHH
Confidence 799999999999999999999864 677889999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcc
Q 000438 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMD 861 (1510)
Q Consensus 782 Ral~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~ 861 (1510)
||++++|+++||||||||||+++++.+++.+. ...+++|+|+|||+++.++.||+|++|++|++++.|+++++++.++.
T Consensus 493 Rall~~~~ililDEptsaLD~~t~~~i~~~l~-~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~~~ 571 (582)
T PRK11176 493 RALLRDSPILILDEATSALDTESERAIQAALD-ELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQNGV 571 (582)
T ss_pred HHHHhCCCEEEEECccccCCHHHHHHHHHHHH-HHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCh
Confidence 99999999999999999999999999987654 44568999999999999999999999999999999999999998888
Q ss_pred hHHHHHH
Q 000438 862 FGALVAA 868 (1510)
Q Consensus 862 f~~l~~~ 868 (1510)
|.++...
T Consensus 572 y~~l~~~ 578 (582)
T PRK11176 572 YAQLHKM 578 (582)
T ss_pred HHHHHHH
Confidence 9888753
No 54
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.6e-62 Score=628.36 Aligned_cols=543 Identities=21% Similarity=0.243 Sum_probs=441.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 320 TTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGML 399 (1510)
Q Consensus 320 ~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~r 399 (1510)
..+++.+++.+++..++.++..++....|++++.+++..-.... ...-+.+++++++..++..++.....+...+.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 84 (571)
T TIGR02203 6 WSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD-RSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNK 84 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567788889999999999999999999999998886543221 11112233344445555556655556667788888
Q ss_pred HHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 400 IRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVGI 478 (1510)
Q Consensus 400 iR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~ 478 (1510)
+...+...+|+|.++.+.....+.+.|+++|.++.|++++.++.. .+..++...+.+++++.+++..=++.+++.++++
T Consensus 85 ~~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~ 164 (571)
T TIGR02203 85 VVRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVML 164 (571)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 889999999999999999888889999999999999999998764 4556665566666666666543333444444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 479 IGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVM 558 (1510)
Q Consensus 479 ~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~ 558 (1510)
++.+.+..+..++.++..++..+..+++.+.++|.++|+++||.++.|+.+.++.++..++..+...+.....+....+.
T Consensus 165 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (571)
T TIGR02203 165 PVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPIT 244 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555667778888899999999999999999999999999999999999888887776665554444333333322222
Q ss_pred HHHHH--HHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccc
Q 000438 559 WSTPV--LISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERV 636 (1510)
Q Consensus 559 ~~~p~--~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~ 636 (1510)
..... .+.++.++.+....+.+|++.+++++.++..+..|+..+...+..+.+++++.+|+.++++.++..+....
T Consensus 245 ~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~-- 322 (571)
T TIGR02203 245 QLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTR-- 322 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC--
Confidence 22222 22344566677778899999999999999999999999999999999999999999999986554322111
Q ss_pred CCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------
Q 000438 637 EGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------- 708 (1510)
Q Consensus 637 ~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------- 708 (1510)
+.......|+++|++|+|++. ++++|+|+||++++||+++|+|+||||||||+++|+|.++|.+|+|.++|
T Consensus 323 ~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~ 401 (571)
T TIGR02203 323 AIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTL 401 (571)
T ss_pred CCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCH
Confidence 111123569999999999753 45799999999999999999999999999999999999999999999998
Q ss_pred -----eEEEEcCCCcCCCccHHHHHhcCCC--CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHH
Q 000438 709 -----TTAYVAQTSWIQNGTIEENILFGLP--MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1510)
Q Consensus 709 -----~iayv~Q~~~i~~~Tv~enI~fg~~--~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1510)
.++||||+|+++++|++|||.++.+ .++++..++++.|++.+++..+|.|.+|.+|++|.+||||||||++||
T Consensus 402 ~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLA 481 (571)
T TIGR02203 402 ASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIA 481 (571)
T ss_pred HHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHH
Confidence 3799999999999999999999964 778889999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcc
Q 000438 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMD 861 (1510)
Q Consensus 782 Ral~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~ 861 (1510)
||++++|+|++||||||+||+++++++++.+. ...+++|+|+|||+.+.++.||+|++|++|++++.|+++++++.++.
T Consensus 482 Rall~~~~illLDEpts~LD~~~~~~i~~~L~-~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~~~ 560 (571)
T TIGR02203 482 RALLKDAPILILDEATSALDNESERLVQAALE-RLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARNGL 560 (571)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHH-HHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcCCH
Confidence 99999999999999999999999999987654 44578999999999999999999999999999999999999987777
Q ss_pred hHHHHH
Q 000438 862 FGALVA 867 (1510)
Q Consensus 862 f~~l~~ 867 (1510)
|.++..
T Consensus 561 ~~~~~~ 566 (571)
T TIGR02203 561 YAQLHN 566 (571)
T ss_pred HHHHHH
Confidence 776644
No 55
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=6.3e-63 Score=668.42 Aligned_cols=215 Identities=18% Similarity=0.269 Sum_probs=189.0
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
..|+++|++++|+.+...+|+||||+|++||.+||+|+||||||||+++|.|+.+|++|+|.++|.++.+ +.++.|++|
T Consensus 1936 ~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~I 2014 (2272)
T TIGR01257 1936 DILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQNM 2014 (2272)
T ss_pred ceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhhE
Confidence 4699999999997543569999999999999999999999999999999999999999999999999975 466788999
Q ss_pred EEecCccccCcc-cHHHhcCCCC---CCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDPIG---QYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
||+||++.++.. |+||||..+. ..++ +.+.++|+.++|.++..+.+ ..||||||||++|||
T Consensus 2015 Gy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~~-----------~~LSGGqKqRLslA~ 2083 (2272)
T TIGR01257 2015 GYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLA-----------GTYSGGNKRKLSTAI 2083 (2272)
T ss_pred EEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999998865 9999996321 2222 34567788999887654443 258999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
||+.+|+||+|||||++||+.+.+.+++.|++.. +++|||++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 2084 ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2084 ALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred HHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 9999999999999999999999999999999863 57999999999999987 999999999999999999998654
No 56
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.3e-65 Score=640.91 Aligned_cols=451 Identities=22% Similarity=0.374 Sum_probs=343.9
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------- 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 708 (1510)
..++++|++++|++ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 10 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 86 (510)
T PRK15439 10 PLLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQL 86 (510)
T ss_pred ceEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhC
Confidence 36999999999963 4699999999999999999999999999999999999999999999987
Q ss_pred eEEEEcCCCcCC-CccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000438 709 TTAYVAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1510)
Q Consensus 709 ~iayv~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~ 787 (1510)
.++|++|++.++ +.|++||+.++.....+..++ ..+-++.+... .....+..+|||||||||+|||||+.+
T Consensus 87 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~------~~~~l~~~~l~--~~~~~~~~~LSgG~~qrv~la~aL~~~ 158 (510)
T PRK15439 87 GIYLVPQEPLLFPNLSVKENILFGLPKRQASMQK------MKQLLAALGCQ--LDLDSSAGSLEVADRQIVEILRGLMRD 158 (510)
T ss_pred CEEEEeccCccCCCCcHHHHhhcccccchHHHHH------HHHHHHHcCCC--ccccCChhhCCHHHHHHHHHHHHHHcC
Confidence 278999998665 569999999975322111111 11223333222 223566789999999999999999999
Q ss_pred CCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhcCcchHHHH
Q 000438 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGMDFGALV 866 (1510)
Q Consensus 788 ~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~ 866 (1510)
|+++||||||++||+...+.+.+.+.+...+|+|+|++||+++++.. ||+|++|++|++++.|+++++... +..
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-----~~~ 233 (510)
T PRK15439 159 SRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTD-----DII 233 (510)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHH-----HHH
Confidence 99999999999999999999987665555568999999999999865 999999999999988887654321 000
Q ss_pred HHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHHHhcCcchHHHHHHHHHHhh
Q 000438 867 AAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCTEAY 946 (1510)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~ 946 (1510)
. ... . .. .
T Consensus 234 ~-------~~~---~-------~~-----------------------~-------------------------------- 241 (510)
T PRK15439 234 Q-------AIT---P-------AA-----------------------R-------------------------------- 241 (510)
T ss_pred H-------HHh---C-------cc-----------------------c--------------------------------
Confidence 0 000 0 00 0
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 947 GWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQI 1026 (1510)
Q Consensus 947 g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l 1026 (1510)
... ..
T Consensus 242 ----------------------------~~~--~~--------------------------------------------- 246 (510)
T PRK15439 242 ----------------------------EKS--LS--------------------------------------------- 246 (510)
T ss_pred ----------------------------ccc--cc---------------------------------------------
Confidence 000 00
Q ss_pred HHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 000438 1027 LRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGY 1106 (1510)
Q Consensus 1027 l~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~ 1106 (1510)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK15439 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHH
Q 000438 1107 YLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFC 1186 (1510)
Q Consensus 1107 y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~ 1186 (1510)
..
T Consensus 247 ---------~~--------------------------------------------------------------------- 248 (510)
T PRK15439 247 ---------AS--------------------------------------------------------------------- 248 (510)
T ss_pred ---------cc---------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCc
Q 000438 1187 LATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHG 1266 (1510)
Q Consensus 1187 ~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g 1266 (1510)
.+. .+ ..|...+ ..+ +..-
T Consensus 249 --------------------------------------------------~~~-~~-~~~~~~~------~~~---~~~~ 267 (510)
T PRK15439 249 --------------------------------------------------QKL-WL-ELPGNRR------QQA---AGAP 267 (510)
T ss_pred --------------------------------------------------ccc-cc-ccccccc------ccC---CCCc
Confidence 000 00 0000000 000 0111
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH-hhcce
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD-LRSRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i 1345 (1510)
-++++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+... .|+++
T Consensus 268 ~l~~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 340 (510)
T PRK15439 268 VLTVEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGL 340 (510)
T ss_pred eEEEeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCc
Confidence 488999983 1699999999999999999999999999999999999999999999999998776654 46789
Q ss_pred EEecCcc---ccCcc-cHHHhcCCC-----CC--CC---HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1346 GIIPQEP---VLFEG-TVRSNIDPI-----GQ--YS---DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1346 ~iIpQdp---~LF~g-TIR~NLdp~-----~~--~s---d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
+|+||+| .+|.. |+++|+..+ .. .. ++++.++|+..++.. ...+.++ ..|||||||
T Consensus 341 ~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LSgG~kq 410 (510)
T PRK15439 341 VYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKF------NHAEQAA----RTLSGGNQQ 410 (510)
T ss_pred EECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCC------CCccCcc----ccCCcHHHH
Confidence 9999996 36654 999998421 10 01 123556677766631 1233333 369999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
|++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.+ ||||++|++|++++.|+++++
T Consensus 411 rl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~ 490 (510)
T PRK15439 411 KVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAI 490 (510)
T ss_pred HHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 9999999999999999999999999999999999999864 47899999999999987 999999999999999999887
Q ss_pred hcC
Q 000438 1490 LER 1492 (1510)
Q Consensus 1490 l~~ 1492 (1510)
.++
T Consensus 491 ~~~ 493 (510)
T PRK15439 491 NVD 493 (510)
T ss_pred CHH
Confidence 644
No 57
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.4e-65 Score=640.44 Aligned_cols=440 Identities=18% Similarity=0.318 Sum_probs=338.9
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------e
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------T 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~ 709 (1510)
.|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 4 ~i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFP---GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeC---CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 589999999995 25799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEcCCCcCC-CccHHHHHhcCCCCCh--hh--HHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHH
Q 000438 710 TAYVAQTSWIQ-NGTIEENILFGLPMNR--AK--YGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1510)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~~~~--~~--~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal 784 (1510)
++|++|++-++ +.|++||+.++..... .. ..+..+ ...+-++.+..++ .......+|||||||||+||||+
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~--~~~~~~~~LSgG~~qrv~la~al 156 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA--EADKLLARLNLRF--SSDKLVGELSIGEQQMVEIAKVL 156 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH--HHHHHHHHcCCCC--CccCchhhCCHHHHHHHHHHHHH
Confidence 79999997654 5799999998743210 00 011001 1122234443332 23466789999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhcCcchH
Q 000438 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGMDFG 863 (1510)
Q Consensus 785 ~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f~ 863 (1510)
+.+|+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++++.. ||+|++|++|+++..|+.+++..
T Consensus 157 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~------ 230 (501)
T PRK10762 157 SFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE------ 230 (501)
T ss_pred hcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH------
Confidence 99999999999999999999999987665554568999999999999865 99999999999987654321100
Q ss_pred HHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHHHhcCcchHHHHHHHHH
Q 000438 864 ALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCT 943 (1510)
Q Consensus 864 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~ 943 (1510)
++ ...
T Consensus 231 --------------------------------------------------------------~~-------------~~~ 235 (501)
T PRK10762 231 --------------------------------------------------------------DS-------------LIE 235 (501)
T ss_pred --------------------------------------------------------------HH-------------HHH
Confidence 00 000
Q ss_pred HhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 944 EAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFF 1023 (1510)
Q Consensus 944 ~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~ 1023 (1510)
.. +..
T Consensus 236 ~~-----------------------------~~~---------------------------------------------- 240 (501)
T PRK10762 236 MM-----------------------------VGR---------------------------------------------- 240 (501)
T ss_pred Hh-----------------------------cCC----------------------------------------------
Confidence 00 000
Q ss_pred HHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000438 1024 SQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWY 1103 (1510)
Q Consensus 1024 ~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~ 1103 (1510)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHH
Q 000438 1104 RGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSF 1183 (1510)
Q Consensus 1104 ~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~ 1183 (1510)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCC
Q 000438 1184 TFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWP 1263 (1510)
Q Consensus 1184 ~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp 1263 (1510)
+.. ..++..+ .+ |
T Consensus 241 ------------------------------------------------------~~~---~~~~~~~-------~~---~ 253 (501)
T PRK10762 241 ------------------------------------------------------KLE---DQYPRLD-------KA---P 253 (501)
T ss_pred ------------------------------------------------------Ccc---ccccccc-------cC---C
Confidence 000 0000000 00 0
Q ss_pred CCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHH-Hhh
Q 000438 1264 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH-DLR 1342 (1510)
Q Consensus 1264 ~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~-~LR 1342 (1510)
..-.++++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|
T Consensus 254 ~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~~ 326 (501)
T PRK10762 254 GEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLA 326 (501)
T ss_pred CCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHH
Confidence 111588999984 279999999999999999999999999999999999999999999999999876653 467
Q ss_pred cceEEecCcc---ccCc-ccHHHhcCCC-----CC----CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCC
Q 000438 1343 SRFGIIPQEP---VLFE-GTVRSNIDPI-----GQ----YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNW 1405 (1510)
Q Consensus 1343 ~~i~iIpQdp---~LF~-gTIR~NLdp~-----~~----~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1405 (1510)
++++|+||+| .+|. -|+++|+... .. .+ ++++.++++.+++.+ ...|.++ ..|
T Consensus 327 ~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~L 396 (501)
T PRK10762 327 NGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKT------PSMEQAI----GLL 396 (501)
T ss_pred CCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCC------CCccCch----hhC
Confidence 8899999997 3554 5999999631 00 11 234667777776631 1123333 469
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000438 1406 SVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1406 S~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1483 (1510)
|||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.
T Consensus 397 SgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~ 476 (501)
T PRK10762 397 SGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGE 476 (501)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999999864 47899999999999876 999999999999999
Q ss_pred cChhHHh
Q 000438 1484 GKPSRLL 1490 (1510)
Q Consensus 1484 gsp~~Ll 1490 (1510)
|+++++.
T Consensus 477 ~~~~~~~ 483 (501)
T PRK10762 477 FTREQAT 483 (501)
T ss_pred eccccCC
Confidence 9988764
No 58
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-64 Score=636.69 Aligned_cols=484 Identities=18% Similarity=0.278 Sum_probs=340.4
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--eEEEEcCCCcCC-C
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--TTAYVAQTSWIQ-N 721 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~iayv~Q~~~i~-~ 721 (1510)
|+++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|++|++.++ +
T Consensus 2 l~i~~ls~~~~---~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~~~i~~~~q~~~~~~~ 78 (530)
T PRK15064 2 LSTANITMQFG---AKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPNERLGKLRQDQFAFEE 78 (530)
T ss_pred EEEEEEEEEeC---CcEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCcCCC
Confidence 78999999995 35799999999999999999999999999999999999999999999986 699999997654 5
Q ss_pred ccHHHHHhcCCCCChh--------------------hHHHHHH----------HhchHHHHHhcccCCcccccCCCCccC
Q 000438 722 GTIEENILFGLPMNRA--------------------KYGEVVR----------VCCLEKDLEMMEYGDQTEIGERGINLS 771 (1510)
Q Consensus 722 ~Tv~enI~fg~~~~~~--------------------~~~~v~~----------~~~l~~dl~~l~~gd~t~ig~~g~~LS 771 (1510)
.|++||+.++...... .+.+..+ .....+-++.+...+. .......+||
T Consensus 79 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~~LS 157 (530)
T PRK15064 79 FTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGVGIPEE-QHYGLMSEVA 157 (530)
T ss_pred CcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCChh-HhcCchhhcC
Confidence 6999999876310000 0000000 0011122333322111 1134568999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEE-EEe
Q 000438 772 GGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMI-VQS 849 (1510)
Q Consensus 772 GGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i-~~~ 849 (1510)
|||||||+||||++.+|+++||||||++||+...+.+.+.+. ..|+|||+|||+++++.. ||+|++|++|++ ++.
T Consensus 158 gGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~---~~~~tiiivsHd~~~~~~~~d~i~~l~~g~i~~~~ 234 (530)
T PRK15064 158 PGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLN---ERNSTMIIISHDRHFLNSVCTHMADLDYGELRVYP 234 (530)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHH---hCCCeEEEEeCCHHHHHhhcceEEEEeCCEEEEec
Confidence 999999999999999999999999999999999998876542 248999999999999865 899999999999 478
Q ss_pred cChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHHHh
Q 000438 850 GRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERE 929 (1510)
Q Consensus 850 g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~ 929 (1510)
|+++++++.... ........ .. + .+++.++
T Consensus 235 g~~~~~~~~~~~-------~~~~~~~~-----------------------~~-------------------~-~~~~~~~ 264 (530)
T PRK15064 235 GNYDEYMTAATQ-------ARERLLAD-----------------------NA-------------------K-KKAQIAE 264 (530)
T ss_pred CCHHHHHHHHHH-------HHHHHHHH-----------------------HH-------------------H-HHHHHHH
Confidence 998876532100 00000000 00 0 0000000
Q ss_pred cCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 000438 930 TGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAY 1009 (1510)
Q Consensus 930 ~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~ 1009 (1510)
...+..
T Consensus 265 --------~~~~~~------------------------------------------------------------------ 270 (530)
T PRK15064 265 --------LQSFVS------------------------------------------------------------------ 270 (530)
T ss_pred --------HHHHHH------------------------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000438 1010 FVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPT 1089 (1510)
Q Consensus 1010 ~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 1089 (1510)
T Consensus 271 -------------------------------------------------------------------------------- 270 (530)
T PRK15064 271 -------------------------------------------------------------------------------- 270 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhH
Q 000438 1090 IFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGS 1169 (1510)
Q Consensus 1090 ~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~ 1169 (1510)
+... ++. ++ ..
T Consensus 271 --------------------------~~~~--~~~---------------~~----------------~~---------- 281 (530)
T PRK15064 271 --------------------------RFSA--NAS---------------KA----------------KQ---------- 281 (530)
T ss_pred --------------------------Hhhc--cch---------------hh----------------HH----------
Confidence 0000 000 00 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccc
Q 000438 1170 NEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEA 1249 (1510)
Q Consensus 1170 ~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~ 1249 (1510)
.+......++... ...+...
T Consensus 282 -----------------------------------------------------------~~~~~~~~~~~~~-~~~~~~~ 301 (530)
T PRK15064 282 -----------------------------------------------------------ATSRAKQIDKIKL-EEVKPSS 301 (530)
T ss_pred -----------------------------------------------------------HHHHHHHHhhccc-cccCCcc
Confidence 0000000000000 0000000
Q ss_pred cccccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEc
Q 000438 1250 AWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIID 1329 (1510)
Q Consensus 1250 ~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~ID 1329 (1510)
........+...-+.+..++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++
T Consensus 302 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~ 379 (530)
T PRK15064 302 RQNPFIRFEQDKKLHRNALEVENLTKGFDN--GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWS 379 (530)
T ss_pred ccCceeeCCCCCCCCCceEEEEeeEEeeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEC
Confidence 000000000000011236999999999964 349999999999999999999999999999999999999999999999
Q ss_pred CeeCCCCCHHHhhcceEEecCccc--cCc-ccHHHhcCCCC--CCCHHHHHHHHHHcCch-HHHHhCcCCccccccCCCC
Q 000438 1330 GIDISLLGLHDLRSRFGIIPQEPV--LFE-GTVRSNIDPIG--QYSDEEIWKSLERCQLK-DVVAAKPDKLDSLVADSGD 1403 (1510)
Q Consensus 1330 G~dI~~i~l~~LR~~i~iIpQdp~--LF~-gTIR~NLdp~~--~~sd~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~ 1403 (1510)
| +++++|+||++. ++. .|+++|+..+. ...++++.++|+..++. +..... ..
T Consensus 380 ~-----------~~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~ 437 (530)
T PRK15064 380 E-----------NANIGYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDIKKS-----------VK 437 (530)
T ss_pred C-----------ceEEEEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHhcCc-----------cc
Confidence 7 357999999984 443 59999986332 23456788899999884 333222 23
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEE-
Q 000438 1404 NWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAK- 1481 (1510)
Q Consensus 1404 nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~iv- 1481 (1510)
+||||||||++||||++++|+||||||||++||+.+...+.+.|++. +.|||+|||+++.+.. ||||++|++|+++
T Consensus 438 ~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~ 515 (530)
T PRK15064 438 VLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVD 515 (530)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEE
Confidence 68999999999999999999999999999999999999999999875 5699999999999987 9999999999998
Q ss_pred EecChhHHhcCCc
Q 000438 1482 EFGKPSRLLERPS 1494 (1510)
Q Consensus 1482 E~gsp~~Ll~~~~ 1494 (1510)
+.|+++++++.++
T Consensus 516 ~~g~~~~~~~~~~ 528 (530)
T PRK15064 516 FSGTYEEYLRSQG 528 (530)
T ss_pred cCCCHHHHHHHhC
Confidence 7799999876543
No 59
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=6.4e-65 Score=638.60 Aligned_cols=446 Identities=21% Similarity=0.334 Sum_probs=337.5
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc--CCcEEEECC--------------
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK--ISGKVKVCG-------------- 708 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~--~~G~i~~~g-------------- 708 (1510)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+| ++|+|.++|
T Consensus 2 l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFG---GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeC---CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 78999999995 25799999999999999999999999999999999999986 799999987
Q ss_pred eEEEEcCCCcCC-CccHHHHHhcCCCCCh----hhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHH
Q 000438 709 TTAYVAQTSWIQ-NGTIEENILFGLPMNR----AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1510)
Q Consensus 709 ~iayv~Q~~~i~-~~Tv~enI~fg~~~~~----~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARa 783 (1510)
.++|++|++.++ +.|++||+.++..... ...++..+ ...+-++.+...+. .......+|||||||||+||||
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~-~~~~~~~~LSgG~~qrv~iA~a 155 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYL--RAKNLLRELQLDAD-NVTRPVGDYGGGQQQLVEIAKA 155 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHH--HHHHHHHHcCCCCC-cccCchhhCCHHHHHHHHHHHH
Confidence 279999998665 5699999998753210 01111111 11222333332211 0123467899999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhcCcch
Q 000438 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGMDF 862 (1510)
Q Consensus 784 l~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f 862 (1510)
++.+|+++||||||++||+...+.+.+.+.+...+|+|+|+|||+++++.. ||+|++|++|+++..|+.+++.
T Consensus 156 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~------ 229 (500)
T TIGR02633 156 LNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS------ 229 (500)
T ss_pred HhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC------
Confidence 999999999999999999999999987665555568999999999999865 9999999999997644311000
Q ss_pred HHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHHHhcCcchHHHHHHHH
Q 000438 863 GALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYC 942 (1510)
Q Consensus 863 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~ 942 (1510)
. +. . .
T Consensus 230 -------------------------------------------------------------~-~~---------~----~ 234 (500)
T TIGR02633 230 -------------------------------------------------------------E-DD---------I----I 234 (500)
T ss_pred -------------------------------------------------------------H-HH---------H----H
Confidence 0 00 0 0
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 943 TEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIF 1022 (1510)
Q Consensus 943 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l 1022 (1510)
....+
T Consensus 235 ~~~~~--------------------------------------------------------------------------- 239 (500)
T TIGR02633 235 TMMVG--------------------------------------------------------------------------- 239 (500)
T ss_pred HHHhC---------------------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 000438 1023 FSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYW 1102 (1510)
Q Consensus 1023 ~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~ 1102 (1510)
.+
T Consensus 240 ----------~~-------------------------------------------------------------------- 241 (500)
T TIGR02633 240 ----------RE-------------------------------------------------------------------- 241 (500)
T ss_pred ----------cc--------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHH
Q 000438 1103 YRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGS 1182 (1510)
Q Consensus 1103 ~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~ 1182 (1510)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCC
Q 000438 1183 FTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNW 1262 (1510)
Q Consensus 1183 ~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~w 1262 (1510)
. +. ..+.+. .+
T Consensus 242 ------------~-----------------------------------------~~-----~~~~~~-------~~---- 252 (500)
T TIGR02633 242 ------------I-----------------------------------------TS-----LYPHEP-------HE---- 252 (500)
T ss_pred ------------c-----------------------------------------cc-----cccccc-------cC----
Confidence 0 00 000000 00
Q ss_pred CCCceEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-CCcEEEEcCeeCCCCCH-H
Q 000438 1263 PAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-SGGRIIIDGIDISLLGL-H 1339 (1510)
Q Consensus 1263 p~~g~I~f~~vs~~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-~~G~I~IDG~dI~~i~l-~ 1339 (1510)
+..--++++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+. .
T Consensus 253 ~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~~ 332 (500)
T TIGR02633 253 IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPAQ 332 (500)
T ss_pred CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHHH
Confidence 011258999999999532 23589999999999999999999999999999999999995 89999999999875443 5
Q ss_pred HhhcceEEecCcc---ccCc-ccHHHhcCCC-----CC---CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCC
Q 000438 1340 DLRSRFGIIPQEP---VLFE-GTVRSNIDPI-----GQ---YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGD 1403 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp---~LF~-gTIR~NLdp~-----~~---~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~ 1403 (1510)
.+|++++++||++ .+|. .|+++|+... .. .. .+++.++|+++++.+ .-.|.++ .
T Consensus 333 ~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~ 402 (500)
T TIGR02633 333 AIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKT------ASPFLPI----G 402 (500)
T ss_pred HHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccC------CCccCcc----c
Confidence 6788999999997 3665 4999999641 11 11 234667777777632 1123333 3
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000438 1404 NWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAK 1481 (1510)
Q Consensus 1404 nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~iv 1481 (1510)
.||||||||++|||||+++|+||||||||++||+.+.+.+++.|++.. ++.|||+|||+++.+.. ||||++|++|+++
T Consensus 403 ~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~ 482 (500)
T TIGR02633 403 RLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLK 482 (500)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEE
Confidence 699999999999999999999999999999999999999999998753 47899999999999987 9999999999999
Q ss_pred EecChhHH
Q 000438 1482 EFGKPSRL 1489 (1510)
Q Consensus 1482 E~gsp~~L 1489 (1510)
..++..++
T Consensus 483 ~~~~~~~~ 490 (500)
T TIGR02633 483 GDFVNHAL 490 (500)
T ss_pred EEEccccC
Confidence 87765543
No 60
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.3e-61 Score=620.32 Aligned_cols=547 Identities=20% Similarity=0.249 Sum_probs=426.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 319 RTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGM 398 (1510)
Q Consensus 319 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~ 398 (1510)
++..++.+++.+.+..++.++..++..+.|+++..+++.+-.+..... -..++..+++..++..+......+...+++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (576)
T TIGR02204 9 LWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGL-LNRYFAFLLVVALVLALGTAARFYLVTWLGE 87 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556667778888888899999999999999999997332221111 1122333333344445555556677788999
Q ss_pred HHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 399 LIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVG 477 (1510)
Q Consensus 399 riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~ 477 (1510)
++...+...+|+|.++++.....+.+.|+++|.++.|++++.+++. .+..++...+.+++++++++..-.+.+++.++.
T Consensus 88 ~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 167 (576)
T TIGR02204 88 RVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLA 167 (576)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999998887888999999999999999988753 344444444444444444432222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 478 IIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIV 557 (1510)
Q Consensus 478 ~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~ 557 (1510)
+++.+.+..+..+..++..++.++.++++.+...|.++|+++||.+++|+.+.++..+..++..+..++.....+....+
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (576)
T TIGR02204 168 VPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAI 247 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233333456777888889999999999999999999999999999999988888776665444433332222221111
Q ss_pred HHH--HHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccc
Q 000438 558 MWS--TPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVER 635 (1510)
Q Consensus 558 ~~~--~p~~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~ 635 (1510)
... .-..+..+.++.+....+.+|.+.+++...++..+..|+..++..+..+.+++++++||.++++.++..+.....
T Consensus 248 ~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~ 327 (576)
T TIGR02204 248 VIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHP 327 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCC
Confidence 111 122334445677777788899999999999999999999999999999999999999999999865431111111
Q ss_pred c-CCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------
Q 000438 636 V-EGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------ 708 (1510)
Q Consensus 636 ~-~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------ 708 (1510)
. ........|+++|++|+|++..++++|+|+||+++|||+++|+|+||||||||+++|+|+++|.+|+|.++|
T Consensus 328 ~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~ 407 (576)
T TIGR02204 328 KTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQL 407 (576)
T ss_pred ccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhc
Confidence 0 111123469999999999754346899999999999999999999999999999999999999999999998
Q ss_pred -------eEEEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHH
Q 000438 709 -------TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 709 -------~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1510)
.++|+||+|+++++|++|||.+|.| .+.++..++++.+++.++++.+|.|.+|.+|++|.+||||||||++|
T Consensus 408 ~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~l 487 (576)
T TIGR02204 408 DPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAI 487 (576)
T ss_pred CHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHH
Confidence 4799999999999999999999876 45667788899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCc
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGM 860 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~ 860 (1510)
|||++++|+++|||||||+||+++++.+++.+. ...+++|+|+|||+++.++.+|+|++|++|++++.|+++++.++++
T Consensus 488 aRal~~~~~ililDEpts~lD~~~~~~i~~~l~-~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~~~ 566 (576)
T TIGR02204 488 ARAILKDAPILLLDEATSALDAESEQLVQQALE-TLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAKGG 566 (576)
T ss_pred HHHHHhCCCeEEEeCcccccCHHHHHHHHHHHH-HHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHcCC
Confidence 999999999999999999999999988876554 4457899999999999999999999999999999999999998888
Q ss_pred chHHHHH
Q 000438 861 DFGALVA 867 (1510)
Q Consensus 861 ~f~~l~~ 867 (1510)
.|.++..
T Consensus 567 ~~~~l~~ 573 (576)
T TIGR02204 567 LYARLAR 573 (576)
T ss_pred hHHHHHh
Confidence 8877654
No 61
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2e-61 Score=619.47 Aligned_cols=539 Identities=19% Similarity=0.233 Sum_probs=419.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 322 LLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEG-YYLVLILLVAKFVEVFSTHQFNFNSQKLGMLI 400 (1510)
Q Consensus 322 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g-~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~ri 400 (1510)
.++.+++.++...++.++..++..+.|+++..+++.+.......... ..+++++++..++..++.....+...+.+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (592)
T PRK10790 17 YGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGV 96 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556677777788888999999999999999999764322211111 22233344445556666666666777888889
Q ss_pred HHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 000438 401 RCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLH-AVWLMPLQISVALILLYNCLGA-SVITTVVGI 478 (1510)
Q Consensus 401 R~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~~~-~~w~~plqi~lal~lL~~~lG~-s~l~gl~~~ 478 (1510)
...+...+|+|.++++.....+.+.|+++|.++.|++++.+.+.... .+....+.+++++.+++ .+++ .+++.++++
T Consensus 97 ~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~li~l~~~ 175 (592)
T PRK10790 97 VQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMF-SLDWRMALVAIMIF 175 (592)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 99999999999999999888889999999999999999998765433 33333333333333333 2332 222333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H
Q 000438 479 IGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISG----N 554 (1510)
Q Consensus 479 ~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~----~ 554 (1510)
.+.+.+.....++.++..++..+..++-.+..+|.++|+++||.|+.|+.+.++..+..++..+...+.....+. .
T Consensus 176 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (592)
T PRK10790 176 PAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPL 255 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333445566667777777788888889999999999999999999999998877665433332221111111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccc
Q 000438 555 IIVMWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVE 634 (1510)
Q Consensus 555 ~~~~~~~p~~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~ 634 (1510)
..++.....++.++ .+.+ ...+.++.+.+++++.++..+..|+..++..+..+.++++|.+||.++++.++.+....
T Consensus 256 ~~~~~~~~~~~~~~-~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~- 332 (592)
T PRK10790 256 LSLFSALILCGLLM-LFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGND- 332 (592)
T ss_pred HHHHHHHHHHHHHH-HHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCC-
Confidence 11111111111112 2223 35667999999999999999999999999999999999999999999998654322111
Q ss_pred ccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----
Q 000438 635 RVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT----- 709 (1510)
Q Consensus 635 ~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~----- 709 (1510)
..+ .....|+++|++|+|++ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 333 ~~~--~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~ 408 (592)
T PRK10790 333 DRP--LQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSL 408 (592)
T ss_pred ccC--CCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhC
Confidence 111 12346999999999974 357999999999999999999999999999999999999999999999983
Q ss_pred --------EEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHH
Q 000438 710 --------TAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1510)
Q Consensus 710 --------iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1510)
++||||+|.+|++|++|||.+|.+.++++..++++.+++.++++.+|.|.+|.+|++|.+||||||||++||
T Consensus 409 ~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialA 488 (592)
T PRK10790 409 SHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALA 488 (592)
T ss_pred CHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHH
Confidence 899999999999999999999988888888999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcc
Q 000438 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMD 861 (1510)
Q Consensus 782 Ral~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~ 861 (1510)
||++++|+|+|||||||+||+++++++.+.+ ....+++|+|+|||+++.++.+|+|++|++|++++.|+++|+++.++.
T Consensus 489 RaLl~~~~illlDEpts~LD~~t~~~i~~~l-~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~~~ 567 (592)
T PRK10790 489 RVLVQTPQILILDEATANIDSGTEQAIQQAL-AAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQGR 567 (592)
T ss_pred HHHHhCCCEEEEeCCcccCCHHHHHHHHHHH-HHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCH
Confidence 9999999999999999999999999997655 444568999999999999999999999999999999999999999999
Q ss_pred hHHHHHHh
Q 000438 862 FGALVAAH 869 (1510)
Q Consensus 862 f~~l~~~~ 869 (1510)
|.++....
T Consensus 568 y~~l~~~~ 575 (592)
T PRK10790 568 YWQMYQLQ 575 (592)
T ss_pred HHHHHHHH
Confidence 99987654
No 62
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-64 Score=633.22 Aligned_cols=442 Identities=21% Similarity=0.324 Sum_probs=336.9
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------e
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------T 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~ 709 (1510)
.++++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 5899999999953 4699999999999999999999999999999999999999999999876 2
Q ss_pred EEEEcCCCcCCC-ccHHHHHhcCCCCC--h-hhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHh
Q 000438 710 TAYVAQTSWIQN-GTIEENILFGLPMN--R-AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1510)
Q Consensus 710 iayv~Q~~~i~~-~Tv~enI~fg~~~~--~-~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~ 785 (1510)
++|++|++.++. .|++||+.++.... . ...++..+ ...+.++.+... .....+..+||||||||++||||++
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~--~~~~~~~~~LSgGq~qrv~laral~ 156 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNY--EAREQLEHLGVD--IDPDTPLKYLSIGQRQMVEIAKALA 156 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHH--HHHHHHHHcCCC--CCcCCchhhCCHHHHHHHHHHHHHH
Confidence 799999987654 69999999864210 0 00011100 122233444332 2235667899999999999999999
Q ss_pred cCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhcCcchHH
Q 000438 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGMDFGA 864 (1510)
Q Consensus 786 ~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~ 864 (1510)
.+|+++||||||++||+.+.+.+++.+.+...+|+|+|+|||+++++.. ||+|++|++|+++..++..+
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~---------- 226 (501)
T PRK11288 157 RNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMA---------- 226 (501)
T ss_pred hCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccc----------
Confidence 9999999999999999999999987665554568999999999999865 99999999999975331000
Q ss_pred HHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHHHhcCcchHHHHHHHHHH
Q 000438 865 LVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCTE 944 (1510)
Q Consensus 865 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~ 944 (1510)
.. . .++ +...
T Consensus 227 -------------------------------------~~----------~----------~~~-------------~~~~ 236 (501)
T PRK11288 227 -------------------------------------QV----------D----------RDQ-------------LVQA 236 (501)
T ss_pred -------------------------------------cC----------C----------HHH-------------HHHH
Confidence 00 0 000 0000
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 945 AYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFS 1024 (1510)
Q Consensus 945 ~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~ 1024 (1510)
. .. .
T Consensus 237 ~------------------------------~~--~-------------------------------------------- 240 (501)
T PRK11288 237 M------------------------------VG--R-------------------------------------------- 240 (501)
T ss_pred h------------------------------cC--C--------------------------------------------
Confidence 0 00 0
Q ss_pred HHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 000438 1025 QILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYR 1104 (1510)
Q Consensus 1025 ~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~ 1104 (1510)
+
T Consensus 241 ---------~---------------------------------------------------------------------- 241 (501)
T PRK11288 241 ---------E---------------------------------------------------------------------- 241 (501)
T ss_pred ---------C----------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHH
Q 000438 1105 GYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFT 1184 (1510)
Q Consensus 1105 ~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~ 1184 (1510)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCC
Q 000438 1185 FCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPA 1264 (1510)
Q Consensus 1185 ~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~ 1264 (1510)
. ++. .+.++ .+ +.
T Consensus 242 ---------------~------------------------------------~~~-----~~~~~-------~~----~~ 254 (501)
T PRK11288 242 ---------------I------------------------------------GDI-----YGYRP-------RP----LG 254 (501)
T ss_pred ---------------c------------------------------------ccc-----ccccc-------cC----CC
Confidence 0 000 00000 00 01
Q ss_pred CceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCH-HHhhc
Q 000438 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL-HDLRS 1343 (1510)
Q Consensus 1265 ~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l-~~LR~ 1343 (1510)
...++++|++++ .+++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +..|+
T Consensus 255 ~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 328 (501)
T PRK11288 255 EVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIRA 328 (501)
T ss_pred CcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHhC
Confidence 125888999742 38999999999999999999999999999999999999999999999999875433 45678
Q ss_pred ceEEecCccc---cC-cccHHHhcCCCC--C-------CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCC
Q 000438 1344 RFGIIPQEPV---LF-EGTVRSNIDPIG--Q-------YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWS 1406 (1510)
Q Consensus 1344 ~i~iIpQdp~---LF-~gTIR~NLdp~~--~-------~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1406 (1510)
+++|+||+|. +| ..|+.+|+.... . .. ++++.++|+..++.+ +..++++ .+||
T Consensus 329 ~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LS 398 (501)
T PRK11288 329 GIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKT------PSREQLI----MNLS 398 (501)
T ss_pred CCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCccc------CCccCcc----ccCC
Confidence 9999999983 55 469999986311 0 01 234667777777631 1233333 3699
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1407 ~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
||||||++|||||+.+|+||||||||++||..+.+.+.+.|++.. .+.|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 399 gGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~ 478 (501)
T PRK11288 399 GGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGEL 478 (501)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEE
Confidence 999999999999999999999999999999999999999998764 47899999999999976 9999999999999999
Q ss_pred ChhHHh
Q 000438 1485 KPSRLL 1490 (1510)
Q Consensus 1485 sp~~Ll 1490 (1510)
++++..
T Consensus 479 ~~~~~~ 484 (501)
T PRK11288 479 AREQAT 484 (501)
T ss_pred ccccCC
Confidence 987755
No 63
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-64 Score=628.45 Aligned_cols=439 Identities=20% Similarity=0.360 Sum_probs=332.6
Q ss_pred eeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------EEEE
Q 000438 648 RDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------TAYV 713 (1510)
Q Consensus 648 ~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------iayv 713 (1510)
+|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 2 ~nl~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 2 SNISKSFP---GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CceEEEeC---CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 57888885 257999999999999999999999999999999999999999999999872 7999
Q ss_pred cCCCcCC-CccHHHHHhcCCC-CChh--hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000438 714 AQTSWIQ-NGTIEENILFGLP-MNRA--KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1510)
Q Consensus 714 ~Q~~~i~-~~Tv~enI~fg~~-~~~~--~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~ 789 (1510)
+|++.++ +.|++||+.++.. .... ...+..+ ...+-++.+.. ......+..+|||||||||+||||++.+|+
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l--~~~~~~~~~~LSgGq~qrv~lA~al~~~p~ 154 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR--DTKAIFDELDI--DIDPRAKVATLSVSQMQMIEIAKAFSYNAK 154 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHH--HHHHHHHHcCC--CCCccCchhhCCHHHHHHHHHHHHHHhCCC
Confidence 9998654 5799999998642 1100 0011000 11222333322 223456778999999999999999999999
Q ss_pred EEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhcCcchHHHHHH
Q 000438 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGMDFGALVAA 868 (1510)
Q Consensus 790 i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~ 868 (1510)
++||||||++||+.+.+.+++.+.+...+|+|+|++||+++++.. ||+|++|++|++++.|+.+++..
T Consensus 155 lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~----------- 223 (491)
T PRK10982 155 IVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTM----------- 223 (491)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCH-----------
Confidence 999999999999999999987665554568999999999999865 99999999999987665322100
Q ss_pred hhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHHHhcCcchHHHHHHHHHHhhhh
Q 000438 869 HETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCTEAYGW 948 (1510)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~ 948 (1510)
++ .....
T Consensus 224 ---------------------------------------------------------~~-------------~~~~~--- 230 (491)
T PRK10982 224 ---------------------------------------------------------DK-------------IIAMM--- 230 (491)
T ss_pred ---------------------------------------------------------HH-------------HHHHH---
Confidence 00 00000
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 949 WGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILR 1028 (1510)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~ 1028 (1510)
T Consensus 231 -------------------------------------------------------------------------------- 230 (491)
T PRK10982 231 -------------------------------------------------------------------------------- 230 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1029 SILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYL 1108 (1510)
Q Consensus 1029 ~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~ 1108 (1510)
T Consensus 231 -------------------------------------------------------------------------------- 230 (491)
T PRK10982 231 -------------------------------------------------------------------------------- 230 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHH
Q 000438 1109 STSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLA 1188 (1510)
Q Consensus 1109 ~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~ 1188 (1510)
++
T Consensus 231 ---------------------------------~~--------------------------------------------- 232 (491)
T PRK10982 231 ---------------------------------VG--------------------------------------------- 232 (491)
T ss_pred ---------------------------------hC---------------------------------------------
Confidence 00
Q ss_pred HHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceE
Q 000438 1189 TLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNV 1268 (1510)
Q Consensus 1189 ~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I 1268 (1510)
. . + .+ ..+.+. .+ +....|
T Consensus 233 --------~---~-------------------------------~---~~-----~~~~~~-------~~----~~~~~i 251 (491)
T PRK10982 233 --------R---S-------------------------------L---TQ-----RFPDKE-------NK----PGEVIL 251 (491)
T ss_pred --------C---C-------------------------------c---cc-----cccccc-------CC----CCCcEE
Confidence 0 0 0 00 000000 00 111258
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH-hhcceEE
Q 000438 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD-LRSRFGI 1347 (1510)
Q Consensus 1269 ~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i~i 1347 (1510)
+++|++++|+ .+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+... +|+.++|
T Consensus 252 ~~~~l~~~~~----~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~ 327 (491)
T PRK10982 252 EVRNLTSLRQ----PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFAL 327 (491)
T ss_pred EEeCcccccC----cccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCEE
Confidence 9999999852 4899999999999999999999999999999999999999999999999998776544 5778999
Q ss_pred ecCccc---cCc-ccHHHh-----cCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1348 IPQEPV---LFE-GTVRSN-----IDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1348 IpQdp~---LF~-gTIR~N-----Ldp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
+||++. +|. .|+++| +... +..+ ++++.++++..++.+ +.+|.++ .+||||||
T Consensus 328 ~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~~----~~LSgGq~ 397 (491)
T PRK10982 328 VTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKT------PGHRTQI----GSLSGGNQ 397 (491)
T ss_pred cCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccC------CCccccc----ccCCcHHH
Confidence 999963 565 466666 3211 1112 223455566655531 1233333 46999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSR 1488 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1488 (1510)
||++||||++++|+||||||||++||+.+.+.+.+.|++.. ++.|||+|||+++.+.. ||||++|++|+++..+++.+
T Consensus 398 qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~~ 477 (491)
T PRK10982 398 QKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVDTKT 477 (491)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEcccc
Confidence 99999999999999999999999999999999999998753 47899999999999976 99999999999998887754
Q ss_pred Hh
Q 000438 1489 LL 1490 (1510)
Q Consensus 1489 Ll 1490 (1510)
+.
T Consensus 478 ~~ 479 (491)
T PRK10982 478 TT 479 (491)
T ss_pred CC
Confidence 43
No 64
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=6.8e-61 Score=610.02 Aligned_cols=528 Identities=20% Similarity=0.233 Sum_probs=414.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 000438 338 IVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITSLYRKGLRLSC 417 (1510)
Q Consensus 338 l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR~~L~~~Iy~K~L~ls~ 417 (1510)
++..++..+.|++++.+++.+..........+.+++.++++.++..++.....+...+.+.++...+...+|+|.++++.
T Consensus 5 ~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~ 84 (569)
T PRK10789 5 IIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHP 84 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 44556667789999999997754321122233445555555556666665555666778889999999999999999999
Q ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 418 SARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGA-SVITTVVGIIGVMIFVVMGTKRNNRF 495 (1510)
Q Consensus 418 ~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~-s~l~gl~~~~l~~~~~~~~~~~~~~~ 495 (1510)
....++.+|+++|.++.|++++..... .+..++..++..++++++++..++| .+++.++++++.+.+...+.++.++.
T Consensus 85 ~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~ 164 (569)
T PRK10789 85 EFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHER 164 (569)
T ss_pred HHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999999999986653 4556666655555555544334554 23333444444444555566777777
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Q 000438 496 QFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWSTP--VLISTLTFATA 573 (1510)
Q Consensus 496 q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~~~~p--~~v~~~tF~~~ 573 (1510)
.++..+..++..+.+.|.++|+++||.|++|+.+.++..+.-++..+...+.....+....+..... ..+.++.++.+
T Consensus 165 ~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 244 (569)
T PRK10789 165 FKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSW 244 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777788889999999999999999999998777765443322222222222222111111111 12233456667
Q ss_pred HHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccccCCCCCCccEEEeeeEEE
Q 000438 574 LLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEVRDGVFS 653 (1510)
Q Consensus 574 ~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~f~ 653 (1510)
...++.+|.+.+++++.++..+..|+..++..+..+.+++++.+||.++++.++..+..... ....+..|+++|++|+
T Consensus 245 lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~~--~~~~~~~I~~~~v~~~ 322 (569)
T PRK10789 245 MVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSEP--VPEGRGELDVNIRQFT 322 (569)
T ss_pred HHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCC--CCCCCCcEEEEEEEEE
Confidence 77788899999999999999999999999999999999999999999999865432211111 1112346999999999
Q ss_pred ccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------EEEEcCCCcCC
Q 000438 654 WDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------TAYVAQTSWIQ 720 (1510)
Q Consensus 654 ~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------iayv~Q~~~i~ 720 (1510)
|+.. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|++|+|+++
T Consensus 323 y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf 401 (569)
T PRK10789 323 YPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLF 401 (569)
T ss_pred CCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeec
Confidence 9743 357999999999999999999999999999999999999999999999873 79999999999
Q ss_pred CccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCC
Q 000438 721 NGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSA 799 (1510)
Q Consensus 721 ~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~sa 799 (1510)
++|++|||.+|.+ .+++..+++++.+++.+++..+|.|.+|.+|++|.+||||||||++||||++++|+++|||||||+
T Consensus 402 ~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~ 481 (569)
T PRK10789 402 SDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSA 481 (569)
T ss_pred cccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcccc
Confidence 9999999999964 567778888899999999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHHHh
Q 000438 800 VDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVAAH 869 (1510)
Q Consensus 800 lD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~~ 869 (1510)
||+++++++.+.+. ...+++|+|+|||+++.++.+|+|++|++|++++.|+++++++..+.|.++...+
T Consensus 482 LD~~~~~~i~~~l~-~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 550 (569)
T PRK10789 482 VDGRTEHQILHNLR-QWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQ 550 (569)
T ss_pred CCHHHHHHHHHHHH-HHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHh
Confidence 99999999987654 4457999999999999999999999999999999999999999888888877643
No 65
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.4e-63 Score=558.79 Aligned_cols=457 Identities=28% Similarity=0.436 Sum_probs=347.6
Q ss_pred ccEEEeeeEEEccCC-CCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC--------
Q 000438 643 IAVEVRDGVFSWDDE-NGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG-------- 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~-~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g-------- 708 (1510)
..++++|++..+... ....++++|||+|++||.+|+||++|||||-...+++|+++. -+|+|.++|
T Consensus 5 ~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se 84 (534)
T COG4172 5 PLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASE 84 (534)
T ss_pred cceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCH
Confidence 468889988877532 345799999999999999999999999999999999999975 468999887
Q ss_pred ---------eEEEEcCCCcC-CC--ccHHHHHh----cCCCCChhhHHHHHHHhchHHHHHh--cccCCcccccCCCCcc
Q 000438 709 ---------TTAYVAQTSWI-QN--GTIEENIL----FGLPMNRAKYGEVVRVCCLEKDLEM--MEYGDQTEIGERGINL 770 (1510)
Q Consensus 709 ---------~iayv~Q~~~i-~~--~Tv~enI~----fg~~~~~~~~~~v~~~~~l~~dl~~--l~~gd~t~ig~~g~~L 770 (1510)
+|++++|+|-- .| -||..-|. ......... .++..+ +-++. .|.. ...+...+.+|
T Consensus 85 ~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~----Ar~r~l-elL~~VgI~~p-~~rl~~yPHeL 158 (534)
T COG4172 85 RQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAA----ARARAL-ELLELVGIPEP-EKRLDAYPHEL 158 (534)
T ss_pred HHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHH----HHHHHH-HHHHHcCCCch-hhhhhhCCccc
Confidence 48999999853 23 36655543 322222211 111111 11111 1211 23456788999
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCEEEE
Q 000438 771 SGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQ 848 (1510)
Q Consensus 771 SGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~ 848 (1510)
||||||||.||.||..+||++|-||||.|||..+..+|.+.+.+... -|-.+++||||+..+.. ||+|.||.+|++++
T Consensus 159 SGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE 238 (534)
T COG4172 159 SGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIVE 238 (534)
T ss_pred CcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEee
Confidence 99999999999999999999999999999999999999976655433 38999999999999986 89999999999999
Q ss_pred ecChHHHHhcCc-chHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHH
Q 000438 849 SGRYNALLNSGM-DFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEE 927 (1510)
Q Consensus 849 ~g~~~~l~~~~~-~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~ 927 (1510)
.|+.+++..... .|....-
T Consensus 239 ~~~t~~lF~~PqHpYTr~Ll------------------------------------------------------------ 258 (534)
T COG4172 239 TGTTETLFAAPQHPYTRKLL------------------------------------------------------------ 258 (534)
T ss_pred cCcHHHHhhCCCChHHHHHH------------------------------------------------------------
Confidence 998777654211 0000000
Q ss_pred HhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 000438 928 RETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVR 1007 (1510)
Q Consensus 928 ~~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~ 1007 (1510)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 000438 1008 AYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAW 1087 (1510)
Q Consensus 1008 ~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~ 1087 (1510)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHH
Q 000438 1088 PTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNN 1167 (1510)
Q Consensus 1088 ~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~ 1167 (1510)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcc
Q 000438 1168 GSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPS 1247 (1510)
Q Consensus 1168 ~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~ 1247 (1510)
+ .
T Consensus 259 ----------------------------------------------------------------------------~--a 260 (534)
T COG4172 259 ----------------------------------------------------------------------------A--A 260 (534)
T ss_pred ----------------------------------------------------------------------------h--c
Confidence 0 0
Q ss_pred cccccccCCCCCCCCCCCceEEEEEEEEEecCC---------CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcc
Q 000438 1248 EAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSN---------TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRL 1318 (1510)
Q Consensus 1248 E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~---------~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl 1318 (1510)
|+. ...+|..-...--++.+|+.+.|+-. .-.+.+||||+.++||.+||||+||||||||-++|+|+
T Consensus 261 eP~----g~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL 336 (534)
T COG4172 261 EPS----GDPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRL 336 (534)
T ss_pred CCC----CCCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhh
Confidence 000 00000000011235666666666421 12489999999999999999999999999999999999
Q ss_pred cCCCCcEEEEcCeeCCCCCHHH---hhcceEEecCccc--cC-cccHHHhcC----CCC-CC----CHHHHHHHHHHcCc
Q 000438 1319 VEPSGGRIIIDGIDISLLGLHD---LRSRFGIIPQEPV--LF-EGTVRSNID----PIG-QY----SDEEIWKSLERCQL 1383 (1510)
Q Consensus 1319 ~ep~~G~I~IDG~dI~~i~l~~---LR~~i~iIpQdp~--LF-~gTIR~NLd----p~~-~~----sd~eI~~aL~~~~L 1383 (1510)
.++. |+|..+|.||...+.++ +|+++-+|+|||+ |= .-||-+-|. -.. .. .|+.+.+||+.+||
T Consensus 337 ~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGL 415 (534)
T COG4172 337 IPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGL 415 (534)
T ss_pred cCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCC
Confidence 9876 99999999999998776 6899999999996 21 225544442 111 22 36779999999999
Q ss_pred hHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEec
Q 000438 1384 KDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAH 1461 (1510)
Q Consensus 1384 ~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAH 1461 (1510)
+...... | ...|||||||||+||||++-+|++++||||||+||..-.++|.+.+++.- .+-+-+.|+|
T Consensus 416 Dp~~r~R---Y-------PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISH 485 (534)
T COG4172 416 DPATRNR---Y-------PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISH 485 (534)
T ss_pred ChhHhhc---C-------CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEec
Confidence 8765432 2 23589999999999999999999999999999999999999999999764 3569999999
Q ss_pred Chhhhhh-cCEEEEEeCCEEEEecChhHHhcCC-cHHHH
Q 000438 1462 RIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP-SLFGA 1498 (1510)
Q Consensus 1462 Rl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~-~~f~~ 1498 (1510)
+|..++. ||+|+||.+|+|||.|+-++++++| ..|.+
T Consensus 486 DL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~ 524 (534)
T COG4172 486 DLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTR 524 (534)
T ss_pred cHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHH
Confidence 9999988 9999999999999999999999999 55543
No 66
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=7.9e-64 Score=627.20 Aligned_cols=440 Identities=21% Similarity=0.305 Sum_probs=332.8
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------E
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------T 710 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------i 710 (1510)
.|+++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 4889999999963 46999999999999999999999999999999999999999999998662 6
Q ss_pred EEEcCCCcC---------CCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHH
Q 000438 711 AYVAQTSWI---------QNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1510)
Q Consensus 711 ayv~Q~~~i---------~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1510)
+|++|++-. +..|++||+.++.. +.++.++.++..++. ........+|||||||||+||
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~~qrv~la 147 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGIT-----------ALLDRRFKYLSTGETRKTLLC 147 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCH-----------hhhhCCcccCCHHHHHHHHHH
Confidence 899998642 14689998876421 112222222222221 123466789999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhcCc
Q 000438 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGM 860 (1510)
Q Consensus 782 Ral~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~ 860 (1510)
||++.+|+++||||||++||+...+.+.+.+.+...+|+|+|++||+++++.. ||+|++|++|+++..|+++++.+..
T Consensus 148 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~- 226 (490)
T PRK10938 148 QALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA- 226 (490)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch-
Confidence 99999999999999999999999999987766554568999999999999865 8999999999999888766543210
Q ss_pred chHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHHHhcCcchHHHHHH
Q 000438 861 DFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKI 940 (1510)
Q Consensus 861 ~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~ 940 (1510)
... .. ... +
T Consensus 227 ----~~~-------~~------------------------~~~----------------------~-------------- 235 (490)
T PRK10938 227 ----LVA-------QL------------------------AHS----------------------E-------------- 235 (490)
T ss_pred ----hhh-------hh------------------------hhh----------------------h--------------
Confidence 000 00 000 0
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 941 YCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQ 1020 (1510)
Q Consensus 941 y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~ 1020 (1510)
.. .. ..
T Consensus 236 ---~~-------------------------------~~-~~--------------------------------------- 241 (490)
T PRK10938 236 ---QL-------------------------------EG-VQ--------------------------------------- 241 (490)
T ss_pred ---cc-------------------------------Cc-cc---------------------------------------
Confidence 00 00 00
Q ss_pred HHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Q 000438 1021 IFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWAN 1100 (1510)
Q Consensus 1021 ~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~ 1100 (1510)
T Consensus 242 -------------------------------------------------------------------------------- 241 (490)
T PRK10938 242 -------------------------------------------------------------------------------- 241 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHH
Q 000438 1101 YWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELL 1180 (1510)
Q Consensus 1101 ~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l 1180 (1510)
T Consensus 242 -------------------------------------------------------------------------------- 241 (490)
T PRK10938 242 -------------------------------------------------------------------------------- 241 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCC
Q 000438 1181 GSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPP 1260 (1510)
Q Consensus 1181 ~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~ 1260 (1510)
.+ + ..+... ... .+.
T Consensus 242 --------------~~-----------------------------------------~-------~~~~~~--~~~-~~~ 256 (490)
T PRK10938 242 --------------LP-----------------------------------------E-------PDEPSA--RHA-LPA 256 (490)
T ss_pred --------------cC-----------------------------------------c-------cccccc--ccc-cCC
Confidence 00 0 000000 000 000
Q ss_pred CCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-CCcEEEEcCeeCCC-CCH
Q 000438 1261 NWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-SGGRIIIDGIDISL-LGL 1338 (1510)
Q Consensus 1261 ~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-~~G~I~IDG~dI~~-i~l 1338 (1510)
....++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.. ...
T Consensus 257 ---~~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~ 331 (490)
T PRK10938 257 ---NEPRIVLNNGVVSYND--RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETI 331 (490)
T ss_pred ---CCceEEEeceEEEECC--eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCH
Confidence 1125999999999964 3489999999999999999999999999999999998876 69999999987632 233
Q ss_pred HHhhcceEEecCccccCc---ccHHHhcCC--C------CCCC---HHHHHHHHHHcCchH-HHHhCcCCccccccCCCC
Q 000438 1339 HDLRSRFGIIPQEPVLFE---GTVRSNIDP--I------GQYS---DEEIWKSLERCQLKD-VVAAKPDKLDSLVADSGD 1403 (1510)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~---gTIR~NLdp--~------~~~s---d~eI~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~ 1403 (1510)
...|++++++||++.++. .|+++++.. . .... ++++.++++.+++.+ ... .++ .
T Consensus 332 ~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~----~ 400 (490)
T PRK10938 332 WDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKRTAD-------APF----H 400 (490)
T ss_pred HHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchhhcc-------Cch----h
Confidence 457889999999987642 477777642 1 1111 245778888888864 322 222 3
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-C-ceEEEEecChhhhhh--cCEEEEEeCCE
Q 000438 1404 NWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-A-CTIISIAHRIPTVMD--CDRVIVVDAGW 1479 (1510)
Q Consensus 1404 nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~-~-~TvI~IAHRl~ti~~--~DrIlVL~~G~ 1479 (1510)
.||||||||++|||||+++|+||||||||++||+++.+.+.+.|++..+ + +|||+|+|+++.+.. ||+|++|++|+
T Consensus 401 ~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~ 480 (490)
T PRK10938 401 SLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGD 480 (490)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCc
Confidence 6899999999999999999999999999999999999999999998643 3 479999999999975 79999999999
Q ss_pred EEEecC
Q 000438 1480 AKEFGK 1485 (1510)
Q Consensus 1480 ivE~gs 1485 (1510)
+++.-+
T Consensus 481 i~~~~~ 486 (490)
T PRK10938 481 IYRYVQ 486 (490)
T ss_pred eEEeec
Confidence 988643
No 67
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.1e-60 Score=608.20 Aligned_cols=539 Identities=20% Similarity=0.252 Sum_probs=412.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCC--CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 322 LLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTS-GKSS--SFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGM 398 (1510)
Q Consensus 322 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~--~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~ 398 (1510)
..+.+++.++++.++.++..++..+.|.++..+++-.- .+.. ........++++++..++..++.....+...+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATF 89 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777888888899999999999999999998542 2211 01111112233444445556666556667778899
Q ss_pred HHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHHHHHH
Q 000438 399 LIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQ-LHAVWLMPLQISVALILLYN---CLGASVITT 474 (1510)
Q Consensus 399 riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~-~~~~w~~plqi~lal~lL~~---~lG~s~l~g 474 (1510)
++...+...+|+|.++++....++..+|++++.++.|++++.+++.. +..+....+.+++++++++. .+++.++++
T Consensus 90 ~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~ 169 (574)
T PRK11160 90 RVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGI 169 (574)
T ss_pred HHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888899999999999999999998753 34444444444444444432 222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 475 VVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGN 554 (1510)
Q Consensus 475 l~~~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~ 554 (1510)
+.++ ...+..++.++.++..++..+..++....+.|.++|+++||.|+.|+.+.++..+..++-.+...+.....+..
T Consensus 170 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (574)
T PRK11160 170 LLLL--LLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLS 247 (574)
T ss_pred HHHH--HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2111 11223455667777788888888888999999999999999999999988888776554433333333322222
Q ss_pred HHHHHHH-HH-HHHHHHHHHHHHhcCccCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccc
Q 000438 555 IIVMWST-PV-LISTLTFATALLFGVPLDAGSVFTTTTIFKI-LQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNE 631 (1510)
Q Consensus 555 ~~~~~~~-p~-~v~~~tF~~~~l~~~~Lta~~vFt~lalf~i-L~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~ 631 (1510)
..+.... .. .+.++.++.+. .++.++.+..++++.+..+ ...|+..++..+..+.++++|.+||.++++.++..++
T Consensus 248 ~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~ 326 (574)
T PRK11160 248 QALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTF 326 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 2221111 11 12233445554 4667888887776655433 3468888999999999999999999999987543211
Q ss_pred cccccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--
Q 000438 632 SVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-- 709 (1510)
Q Consensus 632 ~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-- 709 (1510)
.... +.......|+++|++|+|+++ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 327 ~~~~-~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i 404 (574)
T PRK11160 327 PTTS-TAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPI 404 (574)
T ss_pred Cccc-CCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEh
Confidence 1011 111123579999999999743 357999999999999999999999999999999999999999999999983
Q ss_pred -----------EEEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHH
Q 000438 710 -----------TAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQR 777 (1510)
Q Consensus 710 -----------iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 777 (1510)
++||+|+|+++++|++|||.+|.+ .+++...++++.+++.++++. |.|.+|.+||+|.+||||||||
T Consensus 405 ~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqR 483 (574)
T PRK11160 405 ADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRR 483 (574)
T ss_pred hhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHH
Confidence 799999999999999999999876 466778889999999999999 9999999999999999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHh
Q 000438 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 778 v~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
++||||++++|+++|||||||+||+++++++.+.+ ....+++|+|+|||+++.++.||+|++|++|++++.|+++|+++
T Consensus 484 ialARall~~~~ililDE~ts~lD~~t~~~i~~~l-~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 484 LGIARALLHDAPLLLLDEPTEGLDAETERQILELL-AEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLA 562 (574)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999999998655 44457899999999999999999999999999999999999999
Q ss_pred cCcchHHHHH
Q 000438 858 SGMDFGALVA 867 (1510)
Q Consensus 858 ~~~~f~~l~~ 867 (1510)
.++.|.++.+
T Consensus 563 ~~g~y~~l~~ 572 (574)
T PRK11160 563 QQGRYYQLKQ 572 (574)
T ss_pred cCcHHHHHHh
Confidence 9988888754
No 68
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.6e-60 Score=620.62 Aligned_cols=546 Identities=21% Similarity=0.232 Sum_probs=435.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 318 VRTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLG 397 (1510)
Q Consensus 318 l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g 397 (1510)
.++..++.+++.+....+..++..++..+.|++++.++|.+-.... ...-+.++++++++.++..++.....+...+++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~-~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 207 (694)
T TIGR01846 129 WFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG-LSTLSVLALAMLAVAIFEPALGGLRTYLFAHLT 207 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555677778888888889999999999999999997643221 122234455555666667777777777788899
Q ss_pred HHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 398 MLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVV 476 (1510)
Q Consensus 398 ~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~ 476 (1510)
.++...+...+|+|.++++.....+.++|+++|.+ .|++.+.+++. .+..+....+.+++.+.+++..-++.+++.++
T Consensus 208 ~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~ 286 (694)
T TIGR01846 208 SRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIG 286 (694)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988889999999999 59999998764 33333333333334444444333333444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 477 GIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNII 556 (1510)
Q Consensus 477 ~~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~ 556 (1510)
++++.+.+..++.+..++..++.++..+++...+.|.++|+++||.++.|+.+.++..+.-++..+...+.....+....
T Consensus 287 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (694)
T TIGR01846 287 SLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQ 366 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555566777778888888899999999999999999999999999998888877655544444443333332222
Q ss_pred HHHHHHH--HHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccc
Q 000438 557 VMWSTPV--LISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVE 634 (1510)
Q Consensus 557 ~~~~~p~--~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~ 634 (1510)
....... .+.++.++.+....+.+|.+.+.++..+...+..|+..+...+..+.+++++++|+.++++.++..+.. .
T Consensus 367 ~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~-~ 445 (694)
T TIGR01846 367 AIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA-G 445 (694)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC-C
Confidence 2222221 223456777777788999999999999999999999999999999999999999999999876433211 1
Q ss_pred ccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----
Q 000438 635 RVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT----- 709 (1510)
Q Consensus 635 ~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~----- 709 (1510)
..+....+..|+++|++|+|+++ ++++|+|+||++++||.++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 446 ~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~ 524 (694)
T TIGR01846 446 LAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIA 524 (694)
T ss_pred CCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhC
Confidence 11111223579999999999743 357999999999999999999999999999999999999999999999983
Q ss_pred --------EEEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHH
Q 000438 710 --------TAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 710 --------iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1510)
++||+|+|.++++|++|||.++.+ .+.+...++++.+++.+.++.+|.|.+|.+|++|.+||||||||++|
T Consensus 525 ~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~l 604 (694)
T TIGR01846 525 DPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAI 604 (694)
T ss_pred CHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHH
Confidence 799999999999999999999865 55667778888889999999999999999999999999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCc
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGM 860 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~ 860 (1510)
|||++++|+++|||||||+||+++++.+.+.+.+ ..+++|+|+|||+++.++.||+|++|++|++++.|+++++++.++
T Consensus 605 ARall~~~~ililDEpts~LD~~~~~~i~~~l~~-~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~~~ 683 (694)
T TIGR01846 605 ARALVGNPRILIFDEATSALDYESEALIMRNMRE-ICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLALQG 683 (694)
T ss_pred HHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHH-HhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHcCC
Confidence 9999999999999999999999999999876544 457899999999999999999999999999999999999999888
Q ss_pred chHHHHHH
Q 000438 861 DFGALVAA 868 (1510)
Q Consensus 861 ~f~~l~~~ 868 (1510)
.|.++...
T Consensus 684 ~y~~l~~~ 691 (694)
T TIGR01846 684 LYARLWQQ 691 (694)
T ss_pred hHHHHHHh
Confidence 99888653
No 69
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.8e-61 Score=666.59 Aligned_cols=474 Identities=19% Similarity=0.236 Sum_probs=370.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000438 1012 THVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIF 1091 (1510)
Q Consensus 1012 ~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 1091 (1510)
...+.+....+...+++++++.|..+|++..+|+++||+++|++.++... ..+..+....+.++..++++...-....+
T Consensus 366 ~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~~~lg~~~l 444 (1495)
T PLN03232 366 GRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLYQQLGVASL 444 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 56677788888889999999999999999999999999999999999876 34444444444444433332221001111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhh
Q 000438 1092 LVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNE 1171 (1510)
Q Consensus 1092 ~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1171 (1510)
+.+++++++..+..++.+..+..++.....+....+.++|.++|+++||+|++|+.|.++..+..+...+..........
T Consensus 445 ~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~ 524 (1495)
T PLN03232 445 FGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSA 524 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122222222333334444445555555666688899999999999999999999988887766655544433332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccc
Q 000438 1172 WLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1510)
Q Consensus 1172 wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~ 1251 (1510)
+..+....... ++.++.+.......+.+++|.+-.++++...+..++..+......+.+..+|.+|+.++.+.+++...
T Consensus 525 ~~~~~~~~~~~-~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~ 603 (1495)
T PLN03232 525 FNSFILNSIPV-VVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILA 603 (1495)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 22221111111 11111222223346678899888888888888888888888889999999999999999976654221
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcC
Q 000438 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDG 1330 (1510)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG 1330 (1510)
. .++ ..+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++|.+.
T Consensus 604 ~----~~~-~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~--- 675 (1495)
T PLN03232 604 Q----NPP-LQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV--- 675 (1495)
T ss_pred c----cCC-cCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE---
Confidence 1 111 11234679999999999753 35699999999999999999999999999999999999999999763
Q ss_pred eeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1331 IDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1331 ~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
.+|++|+||||+|.||+|||||||....++++++++++++.|+|.++++.+|+|+||.|||+|.|||||||
T Consensus 676 ---------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQk 746 (1495)
T PLN03232 676 ---------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQK 746 (1495)
T ss_pred ---------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHH
Confidence 46889999999999999999999997778899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHH-HHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHH
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI-QRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~I-q~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
||||||||++++|+|+|||||||+||++|++.| ++.++...+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 747 QRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL 826 (1495)
T PLN03232 747 QRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAEL 826 (1495)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHH
Confidence 999999999999999999999999999999977 5567777789999999999999999999999999999999999999
Q ss_pred hcCCcHHHHHHHHHh
Q 000438 1490 LERPSLFGALVQEYA 1504 (1510)
Q Consensus 1490 l~~~~~f~~lv~~~~ 1504 (1510)
+++++.|++++++..
T Consensus 827 ~~~~~~~~~l~~~~~ 841 (1495)
T PLN03232 827 SKSGSLFKKLMENAG 841 (1495)
T ss_pred HhcchhHHHHHHhcc
Confidence 998899999987654
No 70
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.6e-60 Score=608.40 Aligned_cols=538 Identities=22% Similarity=0.276 Sum_probs=416.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 322 LLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIR 401 (1510)
Q Consensus 322 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR 401 (1510)
.++.+++.+++..++.++..++..+.|+++..+++.+..+. .. + .++..+++..++..+......+...++..++|
T Consensus 13 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~-~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK13657 13 YLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKG-DI--F-PLLAAWAGFGLFNIIAGVLVARHADRLAHRRR 88 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cH--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677777888888999999999999999999775432 11 1 11122222222223333333455677888899
Q ss_pred HHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 000438 402 CTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGA-SVITTVVGII 479 (1510)
Q Consensus 402 ~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~-s~l~gl~~~~ 479 (1510)
..+...+|+|.++++.....+.+.|++++.++.|++.+.+... .+..+....+..++.+++++. +++ .+++.+++++
T Consensus 89 ~~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~l~~l~~~~ 167 (588)
T PRK13657 89 LAVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALF-MNWRLSLVLVVLGI 167 (588)
T ss_pred HHHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 9999999999999999888889999999999999999876543 232322222222222222222 222 2233333344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
Q 000438 480 GVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRE----SEFGWLTKFMYSISGNI 555 (1510)
Q Consensus 480 l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~----~El~~l~~~~~~~a~~~ 555 (1510)
+...+...+.++.++.+++.++..++......|.++|+++||.|+.|+.+.++..+.-+ .+.+..+..........
T Consensus 168 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (588)
T PRK13657 168 VYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNR 247 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455667778888889999999999999999999999999999999987766654433 33333222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccc
Q 000438 556 IVMWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVER 635 (1510)
Q Consensus 556 ~~~~~~p~~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~ 635 (1510)
+ ...-..+.++.++.+....+.+|.+.+++++.++..+..|+..+...+..+.+++.+++|+.++++.++..+.....
T Consensus 248 ~--~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~ 325 (588)
T PRK13657 248 A--ASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGA 325 (588)
T ss_pred H--HHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCC
Confidence 1 11122334556777877888999999999999999999999999999999999999999999999864432111111
Q ss_pred cCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------
Q 000438 636 VEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------- 708 (1510)
Q Consensus 636 ~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------- 708 (1510)
.+.......|+++|++|+|++ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 326 ~~~~~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~ 403 (588)
T PRK13657 326 IDLGRVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVT 403 (588)
T ss_pred CCcCCCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCC
Confidence 111112346999999999973 24699999999999999999999999999999999999999999999998
Q ss_pred ------eEEEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHH
Q 000438 709 ------TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1510)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1510)
.++||||+|+++++|++|||.++.| .+++...++++.+++.+.+..+|.|.+|.+|++|.+||||||||++||
T Consensus 404 ~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialA 483 (588)
T PRK13657 404 RASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIA 483 (588)
T ss_pred HHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHH
Confidence 4899999999999999999999965 456677788999999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcc
Q 000438 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMD 861 (1510)
Q Consensus 782 Ral~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~ 861 (1510)
||++++|+|+|||||||+||+++++.+++.+.. ..+++|+|+|||+++.++.||+|++|++|++++.|+++++++.++.
T Consensus 484 Rall~~~~iliLDEpts~LD~~t~~~i~~~l~~-~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~~~~ 562 (588)
T PRK13657 484 RALLKDPPILILDEATSALDVETEAKVKAALDE-LMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVARGGR 562 (588)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHH-HhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHCCCh
Confidence 999999999999999999999999999876543 4568999999999999999999999999999999999999988888
Q ss_pred hHHHHHHh
Q 000438 862 FGALVAAH 869 (1510)
Q Consensus 862 f~~l~~~~ 869 (1510)
|.++....
T Consensus 563 y~~l~~~~ 570 (588)
T PRK13657 563 FAALLRAQ 570 (588)
T ss_pred HHHHHHHh
Confidence 88887643
No 71
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=8.4e-61 Score=606.11 Aligned_cols=504 Identities=17% Similarity=0.209 Sum_probs=386.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 322 LLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIR 401 (1510)
Q Consensus 322 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR 401 (1510)
..+.+++.++...++.++..++..+.|++++.+++.+...+. ...-+.+..++++..++..++.....+...+.+.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (529)
T TIGR02868 7 LLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP-VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSL 85 (529)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667777778888889999999999999999986643321 1111111112222334444544444555667888888
Q ss_pred HHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 402 CTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQ-LHAVWLMPLQISVALILLYNCLGASVITTVVGIIG 480 (1510)
Q Consensus 402 ~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~-~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~~l 480 (1510)
..+...+|+|.++++....++.++|+++|.++.|++++.+.+.. +..+....+.+++++++++..-...+++.++.+++
T Consensus 86 ~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~ 165 (529)
T TIGR02868 86 GRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLL 165 (529)
T ss_pred HHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999998888899999999999999999987664 33344444444444444433222222222222222
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 481 VMIFV-VMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMW 559 (1510)
Q Consensus 481 ~~~~~-~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~~ 559 (1510)
+..+. .+..+..++..++..+..++..+...|.++|+++||.|++|+.+.++..+..++..+...+.....+....+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (529)
T TIGR02868 166 AGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQL 245 (529)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222 22334445566777788899999999999999999999999999999888776655554444444333332222
Q ss_pred HHHHH--HHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccccC
Q 000438 560 STPVL--ISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVE 637 (1510)
Q Consensus 560 ~~p~~--v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~ 637 (1510)
....+ +.++.++.+...++.++.+.+.+.+.+...+..|+..++..+..+.++++|.+|+.++++.++..++.....+
T Consensus 246 ~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~ 325 (529)
T TIGR02868 246 LAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVPAA 325 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCC
Confidence 22222 2234556666677889999999999999999999999999999999999999999999986653221110000
Q ss_pred --CCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------
Q 000438 638 --GCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------- 708 (1510)
Q Consensus 638 --~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------- 708 (1510)
.......|+++|++|+|+++ +++|+|+||++++||+++|+||+|||||||+++|+|+++|++|+|.++|
T Consensus 326 ~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~~ 403 (529)
T TIGR02868 326 GALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSLQ 403 (529)
T ss_pred cccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhHH
Confidence 11123469999999999742 4699999999999999999999999999999999999999999999998
Q ss_pred -----eEEEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHH
Q 000438 709 -----TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLAR 782 (1510)
Q Consensus 709 -----~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 782 (1510)
.++||||+|++|++||+|||.+|.| .++++..++++.++++++++.+|+|.+|.+||+|.+||||||||++|||
T Consensus 404 ~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiAR 483 (529)
T TIGR02868 404 DELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALAR 483 (529)
T ss_pred HHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHH
Confidence 6899999999999999999999876 5778899999999999999999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCC
Q 000438 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQV 829 (1510)
Q Consensus 783 al~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~ 829 (1510)
|++++|+|+|||||||+||+++++.|.+.+. ...+++|+|+|||++
T Consensus 484 all~~~~iliLDE~TSaLD~~te~~I~~~l~-~~~~~~TvIiItHrl 529 (529)
T TIGR02868 484 ALLADAPILLLDEPTEHLDAGTESELLEDLL-AALSGKTVVVITHHL 529 (529)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHH-HhcCCCEEEEEecCC
Confidence 9999999999999999999999999987654 456789999999985
No 72
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.1e-61 Score=665.14 Aligned_cols=473 Identities=18% Similarity=0.252 Sum_probs=371.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000438 1012 THVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIF 1091 (1510)
Q Consensus 1012 ~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 1091 (1510)
...+.+....+...+++++++.|..+++..++|+++|++++|++.++.... .+..+....+.++..++++...-.+..+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l 444 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASL 444 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777778888899999999999999999999999999999999998874 3444444444444444433321111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhh
Q 000438 1092 LVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNE 1171 (1510)
Q Consensus 1092 ~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1171 (1510)
+.++++++.+.+..++.+..+..++.....+....+.++|.++|+++||+|++|+.|.++..+..+...+..........
T Consensus 445 ~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~ 524 (1622)
T PLN03130 445 IGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSA 524 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222333333444444444555555555667788999999999999999999999988887766554443322222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccc
Q 000438 1172 WLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1510)
Q Consensus 1172 wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~ 1251 (1510)
+..+...... ..+.+..+....+..+.+++|.+-.++++...+..++..+......+....+|.+|+.+|.+.+++.+.
T Consensus 525 ~~~~~~~~~~-~~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~ 603 (1622)
T PLN03130 525 FNSFILNSIP-VLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLL 603 (1622)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 2221111111 111122222223346778999888888888888888888888899999999999999999876543211
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCC-cEEEEc
Q 000438 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSG-GRIIID 1329 (1510)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~-G~I~ID 1329 (1510)
. + ++ .-+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|.+ |+|.
T Consensus 604 ~--~--~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~-- 676 (1622)
T PLN03130 604 P--N--PP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVV-- 676 (1622)
T ss_pred c--C--Cc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEE--
Confidence 0 0 11 11224579999999999753 3569999999999999999999999999999999999999999 9997
Q ss_pred CeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhH
Q 000438 1330 GIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1330 G~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
+|++|+||||+|.+|+|||||||....++++++++++++.|+|+++++.+|+|+||.|||+|.||||||
T Consensus 677 -----------l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQ 745 (1622)
T PLN03130 677 -----------IRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQ 745 (1622)
T ss_pred -----------EcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHH
Confidence 377899999999999999999999877889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHH-HHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhH
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI-QRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSR 1488 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~I-q~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~ 1488 (1510)
||||+||||++++|+|+|||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|++|++|+|+|.|+|++
T Consensus 746 KQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~e 825 (1622)
T PLN03130 746 KQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEE 825 (1622)
T ss_pred HHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHH
Confidence 9999999999999999999999999999999876 567887778999999999999999999999999999999999999
Q ss_pred HhcCCcHHHHHHHHHh
Q 000438 1489 LLERPSLFGALVQEYA 1504 (1510)
Q Consensus 1489 Ll~~~~~f~~lv~~~~ 1504 (1510)
|+++++.|++++++..
T Consensus 826 L~~~~~~~~~l~~~~~ 841 (1622)
T PLN03130 826 LSNNGPLFQKLMENAG 841 (1622)
T ss_pred HHhcchhHHHHHHhcc
Confidence 9998899999987654
No 73
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.9e-60 Score=603.66 Aligned_cols=522 Identities=19% Similarity=0.187 Sum_probs=411.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 325 CFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTL 404 (1510)
Q Consensus 325 ~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR~~L 404 (1510)
.+++.++...++.++..++..+.|++++.+++.+-.... ...-+.+++++++..++..++.....+...+++.++...+
T Consensus 3 ~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 81 (544)
T TIGR01842 3 KNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS-VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGAL 81 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356677778888889999999999999999986542221 1223345556666667777777777888889999999999
Q ss_pred HHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 405 ITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQ--LHAVWLMPLQISVALILLYNCLGASVITTVVGIIGVM 482 (1510)
Q Consensus 405 ~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~--~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~~l~~ 482 (1510)
...+|+|.++++.. ..+...+.++.|++++.+++.. +..+...++.++..+ +++..-++.+++.++++++.+
T Consensus 82 r~~~~~~ll~~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~l~li~l~~~~l~~ 155 (544)
T TIGR01842 82 NQPIFAASFSATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLL-VCFLLHPWIGILALGGAVVLV 155 (544)
T ss_pred HHHHHHHHhcCccc-----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999863 2255678889999999987643 333344444333322 222222222222222222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 483 IFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWSTP 562 (1510)
Q Consensus 483 ~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~~~~p 562 (1510)
.+..+..++.++..++.++..+++.+.++|.++|+++||.|++|+.+.++..+..++..+...+.....+....+.....
T Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (544)
T TIGR01842 156 GLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFR 235 (544)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445567777888889999999999999999999999999999999999887776655554444333333322222222
Q ss_pred --HHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccccCCCC
Q 000438 563 --VLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCD 640 (1510)
Q Consensus 563 --~~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~ 640 (1510)
..+.++.++.+....+.+|++.+++++.++..+..|+..++..+..+.++++|.+|+.++++.++..++.. +...
T Consensus 236 ~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~---~~~~ 312 (544)
T TIGR01842 236 IVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAM---PLPE 312 (544)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC---CCCC
Confidence 12334567777777889999999999999999999999999999999999999999999997654332111 1111
Q ss_pred CCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------
Q 000438 641 DNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------ 708 (1510)
Q Consensus 641 ~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------ 708 (1510)
.+..|+++|++|+|++. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 313 ~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~ 391 (544)
T TIGR01842 313 PEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFG 391 (544)
T ss_pred CCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHh
Confidence 23469999999999642 35799999999999999999999999999999999999999999999987
Q ss_pred -eEEEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhc
Q 000438 709 -TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQ 786 (1510)
Q Consensus 709 -~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~ 786 (1510)
.++||||+|+++++|++|||.++.+ .+++...++++.+++++.++.+|.|.+|.+|++|.+||||||||++||||+++
T Consensus 392 ~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~ 471 (544)
T TIGR01842 392 KHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYG 471 (544)
T ss_pred hheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhc
Confidence 3799999999999999999986654 66777888889999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHh
Q 000438 787 DCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 787 ~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
+|+++|||||||+||+++++.+.+.+.+...+++|+|++||+++.+..||+|++|++|++++.|+++++++
T Consensus 472 ~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 472 DPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999998765444346899999999999888899999999999999999988764
No 74
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=8.8e-61 Score=606.71 Aligned_cols=472 Identities=18% Similarity=0.194 Sum_probs=359.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHH
Q 000438 996 TAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITL 1075 (1510)
Q Consensus 996 l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~ 1075 (1510)
+.++..++.+++.++....+.+...+++.++++++++.|++||++.++|++++|+++|++.+...+. .+..++...+.+
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~ 135 (547)
T PRK10522 57 LLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIILT 135 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHH
Confidence 3334455667788888899999999999999999999999999999999999999999999987654 355667777788
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcH---HHHHHHH
Q 000438 1076 LGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQ---TTFYQEN 1152 (1510)
Q Consensus 1076 ~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~---~~f~~~~ 1152 (1510)
++.+++++..+|.+.++++..+++.+++..++.+..+...+......+...+++.|.++|+.+|+ ++.+ +.+.+++
T Consensus 136 i~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~ 214 (547)
T PRK10522 136 LGSAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEY 214 (547)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHH
Confidence 88888888899988877665555555454444444444444445667788999999999999995 5443 3455555
Q ss_pred HHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHH-HHHHHHHHHhc-cCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1153 VNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTF-CLATLFMILLP-SSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVE 1230 (1510)
Q Consensus 1153 ~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~-~~~~~~~v~~~-~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le 1230 (1510)
.+..+...+...... ++......+..++. ...+++.+... .+....+..+....+.+.+...+..+...+..+.
T Consensus 215 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~ 290 (547)
T PRK10522 215 EPDAQEYRHHIIRAD----TFHLSAVNWSNIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLL 290 (547)
T ss_pred hHHHHHHHhhhHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555554443332221 11111111111111 11111111111 1111222333333344445567778888888899
Q ss_pred HHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHH
Q 000438 1231 NRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKST 1310 (1510)
Q Consensus 1231 ~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKST 1310 (1510)
....+.+|+.++.+.|.|.+.. ...+. |..+.|+++||+|+|+.+ +++|+|+||+|+|||++||||+|||||||
T Consensus 291 ~~~~a~~ri~~l~~~~~~~~~~--~~~~~---~~~~~i~~~~v~f~y~~~-~~~l~~i~~~i~~G~~~aivG~sGsGKST 364 (547)
T PRK10522 291 SAQVAFNKLNKLALAPYKAEFP--RPQAF---PDWQTLELRNVTFAYQDN-GFSVGPINLTIKRGELLFLIGGNGSGKST 364 (547)
T ss_pred HHHHHHHHHHHHhccccccccc--ccccc---CcCceEEEEEEEEEeCCC-CeEEecceEEEcCCCEEEEECCCCCCHHH
Confidence 9999999999987655432111 11111 223689999999999843 45999999999999999999999999999
Q ss_pred HHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhC
Q 000438 1311 LIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAK 1390 (1510)
Q Consensus 1311 Ll~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~l 1390 (1510)
|+++|+|+++|++|+|.+||+|+++++.+++|+++++|||||.+|+||+++| ....+|++++++++++++.+.+..
T Consensus 365 L~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~- 440 (547)
T PRK10522 365 LAMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL- 440 (547)
T ss_pred HHHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-
Confidence 9999999999999999999999999999999999999999999999999999 235788999999999999877653
Q ss_pred cCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh
Q 000438 1391 PDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD 1468 (1510)
Q Consensus 1391 p~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~ 1468 (1510)
++|. .+|.+||||||||++||||++++|+|||||||||+||+++++.|.+.+.+.. +++|+|+||||++++..
T Consensus 441 ~~~~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~ 515 (547)
T PRK10522 441 EDGR-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIH 515 (547)
T ss_pred cccC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHh
Confidence 4442 2488999999999999999999999999999999999999999999998665 48999999999999999
Q ss_pred cCEEEEEeCCEEEEe-cChhH
Q 000438 1469 CDRVIVVDAGWAKEF-GKPSR 1488 (1510)
Q Consensus 1469 ~DrIlVL~~G~ivE~-gsp~~ 1488 (1510)
||+|++|++|+++|. |++.+
T Consensus 516 ~d~i~~l~~G~i~e~~~~~~~ 536 (547)
T PRK10522 516 ADRLLEMRNGQLSELTGEERD 536 (547)
T ss_pred CCEEEEEECCEEEEecCCchh
Confidence 999999999999998 44433
No 75
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=3.6e-62 Score=619.07 Aligned_cols=480 Identities=22% Similarity=0.302 Sum_probs=334.7
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--eEEEEcCCCcCC-
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--TTAYVAQTSWIQ- 720 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~iayv~Q~~~i~- 720 (1510)
.++++|++++|++ ++++|+|+||+|++|++++|+|+||||||||+++|+|+.+|++|+|.+++ .++|++|+|+++
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~ 81 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLDP 81 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCCC
Confidence 5899999999962 24799999999999999999999999999999999999999999999874 699999999876
Q ss_pred CccHHHHHhcCCCC------------------Ch---------hhHHHHHHHhch-------HHHHHhcccCCcccccCC
Q 000438 721 NGTIEENILFGLPM------------------NR---------AKYGEVVRVCCL-------EKDLEMMEYGDQTEIGER 766 (1510)
Q Consensus 721 ~~Tv~enI~fg~~~------------------~~---------~~~~~v~~~~~l-------~~dl~~l~~gd~t~ig~~ 766 (1510)
+.|++|||.++... +. ..+.+.++.++. ..-++.+... .....
T Consensus 82 ~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~---~~~~~ 158 (552)
T TIGR03719 82 TKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCP---PWDAD 158 (552)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCC---cccCc
Confidence 56999999886321 00 011122222221 1112222221 13567
Q ss_pred CCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCE
Q 000438 767 GINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGM 845 (1510)
Q Consensus 767 g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~ 845 (1510)
..+|||||||||+||||++.+|+++||||||++||+++.+.+.+.+.+ . ++|+|+|||+++++.. ||++++|++|+
T Consensus 159 ~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~-~--~~tvIiisHd~~~~~~~~d~v~~l~~g~ 235 (552)
T TIGR03719 159 VTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQE-Y--PGTVVAVTHDRYFLDNVAGWILELDRGR 235 (552)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHh-C--CCeEEEEeCCHHHHHhhcCeEEEEECCE
Confidence 789999999999999999999999999999999999999988765433 2 3699999999999876 89999999999
Q ss_pred EE-EecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhh
Q 000438 846 IV-QSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIK 924 (1510)
Q Consensus 846 i~-~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 924 (1510)
++ ..|+++++.+... ...+.. ..
T Consensus 236 i~~~~g~~~~~~~~~~----------~~~~~~----------------------------------------------~~ 259 (552)
T TIGR03719 236 GIPWEGNYSSWLEQKE----------KRLEQE----------------------------------------------EK 259 (552)
T ss_pred EEEecCCHHHHHHHHH----------HHHHHH----------------------------------------------HH
Confidence 75 7788887654210 000000 00
Q ss_pred HHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHH
Q 000438 925 EEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVIL 1004 (1510)
Q Consensus 925 ~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~ 1004 (1510)
+.++ +...+..... |+.
T Consensus 260 ~~~~---------~~~~~~~~~~-----------------------~~~------------------------------- 276 (552)
T TIGR03719 260 EESA---------RQKALKRELE-----------------------WVR------------------------------- 276 (552)
T ss_pred HHHH---------HHHHHHHHHH-----------------------HHH-------------------------------
Confidence 0000 0000000000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1005 VVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQ 1084 (1510)
Q Consensus 1005 ~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~ 1084 (1510)
T Consensus 277 -------------------------------------------------------------------------------- 276 (552)
T TIGR03719 277 -------------------------------------------------------------------------------- 276 (552)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHH
Q 000438 1085 YAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDF 1164 (1510)
Q Consensus 1085 ~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~ 1164 (1510)
+. ...++ ++
T Consensus 277 --------------------~~--~~~~~-------~~------------------------------------------ 285 (552)
T TIGR03719 277 --------------------SS--PKARQ-------AK------------------------------------------ 285 (552)
T ss_pred --------------------hh--hhhHH-------HH------------------------------------------
Confidence 00 00000 00
Q ss_pred HHHhHhhHHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q 000438 1165 HNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTE 1244 (1510)
Q Consensus 1165 ~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~ 1244 (1510)
.+......++..+. .
T Consensus 286 ----------------------------------------------------------------~~~~~~~~~~~~~~-~ 300 (552)
T TIGR03719 286 ----------------------------------------------------------------SKARLARYEELLSQ-E 300 (552)
T ss_pred ----------------------------------------------------------------HHHHHHHHHhhhhh-c
Confidence 00000000111110 0
Q ss_pred CcccccccccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCc
Q 000438 1245 IPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGG 1324 (1510)
Q Consensus 1245 ~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G 1324 (1510)
++..+.......+...-+.+..++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|
T Consensus 301 -~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G 377 (552)
T TIGR03719 301 -FQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGD--KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSG 377 (552)
T ss_pred -ccccCCCceeecCCCCCCCCeEEEEeeEEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCe
Confidence 0000000000000000011235999999999964 3599999999999999999999999999999999999999999
Q ss_pred EEEEcCeeCCCCCHHHhhcceEEecCccc-cCc-ccHHHhcCCCC---CC--CHHHHHHHHHHcCchHHHHhCcCCcccc
Q 000438 1325 RIIIDGIDISLLGLHDLRSRFGIIPQEPV-LFE-GTVRSNIDPIG---QY--SDEEIWKSLERCQLKDVVAAKPDKLDSL 1397 (1510)
Q Consensus 1325 ~I~IDG~dI~~i~l~~LR~~i~iIpQdp~-LF~-gTIR~NLdp~~---~~--sd~eI~~aL~~~~L~~~i~~lp~gLdt~ 1397 (1510)
+|.+++ + .+++|+||++. ++. -|+++|+.... .. .+.+..++++..++.+.. .|.+
T Consensus 378 ~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~ 440 (552)
T TIGR03719 378 TIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGSD------QQKK 440 (552)
T ss_pred EEEECC-c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChhH------hcCc
Confidence 999964 2 16999999973 664 49999996321 11 134456677777774321 1222
Q ss_pred ccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEe
Q 000438 1398 VADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVD 1476 (1510)
Q Consensus 1398 v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~ 1476 (1510)
+ ..||||||||++|||||+.+|+||||||||++||+.+...+.+.|++. . .|||+|||+++.+.. ||+|++|+
T Consensus 441 ~----~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~d~i~~l~ 514 (552)
T TIGR03719 441 V----GQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIATHILAFE 514 (552)
T ss_pred h----hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhCCEEEEEE
Confidence 2 369999999999999999999999999999999999999999999985 3 589999999999987 99999999
Q ss_pred C-CEEEEe-cChhHHhcC
Q 000438 1477 A-GWAKEF-GKPSRLLER 1492 (1510)
Q Consensus 1477 ~-G~ivE~-gsp~~Ll~~ 1492 (1510)
+ |+++++ |+++++.+.
T Consensus 515 ~~~~~~~~~g~~~~~~~~ 532 (552)
T TIGR03719 515 GDSHVEWFEGNYSEYEED 532 (552)
T ss_pred CCCeEEEeCCCHHHHHHH
Confidence 7 688754 777766543
No 76
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5e-62 Score=617.68 Aligned_cols=482 Identities=21% Similarity=0.285 Sum_probs=336.5
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--eEEEEcCCCcCC
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--TTAYVAQTSWIQ 720 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~iayv~Q~~~i~ 720 (1510)
..|+++|++++|++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ .+|||+|+|.++
T Consensus 5 ~~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~ 82 (556)
T PRK11819 5 YIYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQLD 82 (556)
T ss_pred EEEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCC
Confidence 36899999999952 35799999999999999999999999999999999999999999999864 699999999876
Q ss_pred C-ccHHHHHhcCCC-CCh--hh---------------------HHHHHHH----------hchHHHHHhcccCCcccccC
Q 000438 721 N-GTIEENILFGLP-MNR--AK---------------------YGEVVRV----------CCLEKDLEMMEYGDQTEIGE 765 (1510)
Q Consensus 721 ~-~Tv~enI~fg~~-~~~--~~---------------------~~~v~~~----------~~l~~dl~~l~~gd~t~ig~ 765 (1510)
. .|++||+.++.. +.. .+ +.+..+. ......++.+... ....
T Consensus 83 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---~~~~ 159 (556)
T PRK11819 83 PEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCP---PWDA 159 (556)
T ss_pred CCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCC---cccC
Confidence 4 699999988631 000 00 0000000 0111122222221 2356
Q ss_pred CCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCC
Q 000438 766 RGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREG 844 (1510)
Q Consensus 766 ~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G 844 (1510)
+..+|||||||||+||||++.+|+++||||||++||+...+.+.+.+ +.. ++|+|+|||+++++.. ||+|++|++|
T Consensus 160 ~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L-~~~--~~tviiisHd~~~~~~~~d~i~~l~~g 236 (556)
T PRK11819 160 KVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFL-HDY--PGTVVAVTHDRYFLDNVAGWILELDRG 236 (556)
T ss_pred chhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHH-HhC--CCeEEEEeCCHHHHHhhcCeEEEEeCC
Confidence 77899999999999999999999999999999999999999887644 333 3599999999999876 8999999999
Q ss_pred EEE-EecChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhh
Q 000438 845 MIV-QSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLI 923 (1510)
Q Consensus 845 ~i~-~~g~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 923 (1510)
+++ +.|+++++.+... ...+.. .
T Consensus 237 ~i~~~~g~~~~~~~~~~----------~~~~~~----------------------------------------------~ 260 (556)
T PRK11819 237 RGIPWEGNYSSWLEQKA----------KRLAQE----------------------------------------------E 260 (556)
T ss_pred EEEEecCCHHHHHHHHH----------HHHHHH----------------------------------------------H
Confidence 986 7888887653210 000000 0
Q ss_pred hHHHHhcCcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHH
Q 000438 924 KEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVI 1003 (1510)
Q Consensus 924 ~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~ 1003 (1510)
.+.+... ..++.... | ..
T Consensus 261 ~~~~~~~---------~~~~~~~~-----------------------~----~~-------------------------- 278 (556)
T PRK11819 261 KQEAARQ---------KALKRELE-----------------------W----VR-------------------------- 278 (556)
T ss_pred HHHHHHH---------HHHHHHHH-----------------------H----HH--------------------------
Confidence 0000000 00000000 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1004 LVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITC 1083 (1510)
Q Consensus 1004 ~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~ 1083 (1510)
+.+
T Consensus 279 ----------------------------~~~------------------------------------------------- 281 (556)
T PRK11819 279 ----------------------------QSP------------------------------------------------- 281 (556)
T ss_pred ----------------------------Hhh-------------------------------------------------
Confidence 000
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhH
Q 000438 1084 QYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMD 1163 (1510)
Q Consensus 1084 ~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~ 1163 (1510)
..+..
T Consensus 282 --------------------------~~~~~------------------------------------------------- 286 (556)
T PRK11819 282 --------------------------KARQA------------------------------------------------- 286 (556)
T ss_pred --------------------------hhhHH-------------------------------------------------
Confidence 00000
Q ss_pred HHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhh
Q 000438 1164 FHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFT 1243 (1510)
Q Consensus 1164 ~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~ 1243 (1510)
..+......+|..+.
T Consensus 287 ----------------------------------------------------------------~~~~~~~~~~~~~~~- 301 (556)
T PRK11819 287 ----------------------------------------------------------------KSKARLARYEELLSE- 301 (556)
T ss_pred ----------------------------------------------------------------HHHHHHHHHHHhhcc-
Confidence 000000000111000
Q ss_pred cCcccccccccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCC
Q 000438 1244 EIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSG 1323 (1510)
Q Consensus 1244 ~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~ 1323 (1510)
.+.+.+.......++...+...-++++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+|++
T Consensus 302 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~ 378 (556)
T PRK11819 302 -EYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGD--RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDS 378 (556)
T ss_pred -cccccCCCceeecCCCCCCCCeEEEEEeEEEEECC--eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCC
Confidence 00000000000001111112336999999999964 359999999999999999999999999999999999999999
Q ss_pred cEEEEcCeeCCCCCHHHhhcceEEecCcc-ccCc-ccHHHhcCCCC---C--CCHHHHHHHHHHcCchHHHHhCcCCccc
Q 000438 1324 GRIIIDGIDISLLGLHDLRSRFGIIPQEP-VLFE-GTVRSNIDPIG---Q--YSDEEIWKSLERCQLKDVVAAKPDKLDS 1396 (1510)
Q Consensus 1324 G~I~IDG~dI~~i~l~~LR~~i~iIpQdp-~LF~-gTIR~NLdp~~---~--~sd~eI~~aL~~~~L~~~i~~lp~gLdt 1396 (1510)
|+|.+++ + .+++|+||++ .++. -|+++|+.... . ..+++..++++..++.+.. ++.
T Consensus 379 G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~ 441 (556)
T PRK11819 379 GTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGGD------QQK 441 (556)
T ss_pred eEEEECC-c----------eEEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChhH------hcC
Confidence 9999964 2 1699999997 5665 49999996321 1 1234556778887774321 122
Q ss_pred cccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEE
Q 000438 1397 LVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVV 1475 (1510)
Q Consensus 1397 ~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL 1475 (1510)
.+ ..||||||||++||||++.+|++|||||||++||+.+...+.+.|++. . .|||+|||+++.+.. ||+|++|
T Consensus 442 ~~----~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l 515 (556)
T PRK11819 442 KV----GVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAF 515 (556)
T ss_pred ch----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 22 368999999999999999999999999999999999999999999875 4 489999999999887 9999999
Q ss_pred eC-CEEEE-ecChhHHhcCC
Q 000438 1476 DA-GWAKE-FGKPSRLLERP 1493 (1510)
Q Consensus 1476 ~~-G~ivE-~gsp~~Ll~~~ 1493 (1510)
++ |++.+ .|+++++++++
T Consensus 516 ~~~g~~~~~~g~~~~~~~~~ 535 (556)
T PRK11819 516 EGDSQVEWFEGNFQEYEEDK 535 (556)
T ss_pred ECCCeEEEecCCHHHHHHHH
Confidence 86 88875 68888887654
No 77
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3e-59 Score=596.07 Aligned_cols=534 Identities=24% Similarity=0.320 Sum_probs=416.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 326 FWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLI 405 (1510)
Q Consensus 326 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR~~L~ 405 (1510)
++ .+....++.++..++....|.++..+++.+.. + ......+...+++..++..++.....+....++.++...+.
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr 88 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA-D--LGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLR 88 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-h--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 77888888889999999999999999987761 1 11122233333333334445555555556666688888888
Q ss_pred HHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000438 406 TSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWL-MPLQISVALILLYNCLGAS-VITTVVGIIGVMI 483 (1510)
Q Consensus 406 ~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~~~~~w~-~plqi~lal~lL~~~lG~s-~l~gl~~~~l~~~ 483 (1510)
..+|+|.++++....+++..|++++.++.|++.+.+.+........ .++-++..+++++ .++|. +++.+++.+++..
T Consensus 89 ~~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~l~~~~~~~~~~~ 167 (567)
T COG1132 89 RDLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLF-SLSWRLALILLLILPLLAL 167 (567)
T ss_pred HHHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHH
Confidence 9999999999998888899999999999999999998876522222 3333333333333 33332 2222222233333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000438 484 FVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNI-IVMWSTP 562 (1510)
Q Consensus 484 ~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~-~~~~~~p 562 (1510)
+...+.++.++..++..+..++..+.+.|.++|+++||.|+.|+...++..+..++..+.-.+.....+... .......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (567)
T COG1132 168 VLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSS 247 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555556788888888889999999999999999999999998766655544433333222222222221 1111111
Q ss_pred H-HHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccccCCCCC
Q 000438 563 V-LISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDD 641 (1510)
Q Consensus 563 ~-~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~ 641 (1510)
+ .+.++..+.+....+.++.+.+.+.+.++..+..|+..+...+..+.++.+|.+|+.++++.++...+.... ....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--~~~~ 325 (567)
T COG1132 248 LGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP--LKDT 325 (567)
T ss_pred HHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC--CCCC
Confidence 1 223334555555667799999999999999999999999999999999999999999999985532221111 1123
Q ss_pred CccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000438 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1510)
+..|+++|++|+|++ ++++|+|+||++++||.+|||||+|||||||++.|+|.++|++|+|.++|
T Consensus 326 ~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~ 403 (567)
T COG1132 326 IGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRK 403 (567)
T ss_pred CCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHH
Confidence 356999999999974 46899999999999999999999999999999999999999999999988
Q ss_pred eEEEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000438 709 TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1510)
Q Consensus 709 ~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~ 787 (1510)
+++||||+|++|++||+|||.+|.| .+++...++++.+++.+.++.+|.|.+|.+||+|.+||||||||++||||++.|
T Consensus 404 ~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~ 483 (567)
T COG1132 404 RIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRN 483 (567)
T ss_pred hccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcC
Confidence 3799999999999999999999988 466677788888889999999999999999999999999999999999999999
Q ss_pred CCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHH
Q 000438 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVA 867 (1510)
Q Consensus 788 ~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~ 867 (1510)
|+|++||||||+||+++++.|.+.+. ...++||+|+|+|+++.+..||+|+||++|+|++.|+++|+++.++.|.++..
T Consensus 484 ~~ILILDEaTSalD~~tE~~I~~~l~-~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~~g~y~~l~~ 562 (567)
T COG1132 484 PPILILDEATSALDTETEALIQDALK-KLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAKGGLYARLYQ 562 (567)
T ss_pred CCEEEEeccccccCHHhHHHHHHHHH-HHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHcCCHHHHHHH
Confidence 99999999999999999999987655 44478999999999999999999999999999999999999999999999886
Q ss_pred Hh
Q 000438 868 AH 869 (1510)
Q Consensus 868 ~~ 869 (1510)
.+
T Consensus 563 ~~ 564 (567)
T COG1132 563 AQ 564 (567)
T ss_pred Hh
Confidence 54
No 78
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=8.5e-59 Score=591.62 Aligned_cols=538 Identities=20% Similarity=0.249 Sum_probs=414.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 322 LLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIR 401 (1510)
Q Consensus 322 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR 401 (1510)
.++.+++.++...++.++..++..+.|++++.+++.+..++.. ..++..+++..++..+......+...++..++|
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSDV----LPTLALWAGFGVFNTIAYVLVAREADRLAHGRR 88 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4466788888888899999999999999999999976543211 111111222233333333334455678888899
Q ss_pred HHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 402 CTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVGIIG 480 (1510)
Q Consensus 402 ~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~~l 480 (1510)
..+...+|+|.++++....+++++|++++.++.|++.+.+++. .+..+....+.+++++++++..-...+++.++++++
T Consensus 89 ~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~ 168 (585)
T TIGR01192 89 ATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGIL 168 (585)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988889999999999999999987654 333334444444444443332212222223333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHH
Q 000438 481 VMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRES----EFGWLTKFMYSISGNII 556 (1510)
Q Consensus 481 ~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~----El~~l~~~~~~~a~~~~ 556 (1510)
...+...+.++.++.+++..+..++..+.+.|.++|+++||.++.|+.+.++..+.-++ +.+..+..........+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (585)
T TIGR01192 169 YILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRM 248 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566777777788888888889999999999999999999999887777654443 22222222222122211
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccc
Q 000438 557 VMWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERV 636 (1510)
Q Consensus 557 ~~~~~p~~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~ 636 (1510)
+.... .+.++.++.+....+.++.+.+++.+.++..+..|+..+...+..+.+++++++|+.++++.++..++.....
T Consensus 249 ~~~~~--~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~ 326 (585)
T TIGR01192 249 ASTIS--MMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPADAP 326 (585)
T ss_pred HHHHH--HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCccCC
Confidence 11111 2334556777777889999999999999999999999999999999999999999999997653321111100
Q ss_pred CCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------
Q 000438 637 EGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------- 708 (1510)
Q Consensus 637 ~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------- 708 (1510)
+.......++++|++|+|++ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 327 ~~~~~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~ 404 (585)
T TIGR01192 327 ELPNVKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTR 404 (585)
T ss_pred CCCCCCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCH
Confidence 11112346999999999974 24689999999999999999999999999999999999999999999987
Q ss_pred -----eEEEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHH
Q 000438 709 -----TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLAR 782 (1510)
Q Consensus 709 -----~iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 782 (1510)
.++||+|+|+++++|++|||.++.+ .+++...++++.+++.+.+..+|.|.+|.+|++|.+||||||||++|||
T Consensus 405 ~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lAR 484 (585)
T TIGR01192 405 ESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIAR 484 (585)
T ss_pred HHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHH
Confidence 3799999999999999999999865 3455566777777888889999999999999999999999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcch
Q 000438 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDF 862 (1510)
Q Consensus 783 al~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f 862 (1510)
|++++|+++|||||||+||+++++.+.+.+ ....+++|+|+|||+++.++.||+|++|++|++++.|+++++++.++.|
T Consensus 485 all~~p~ililDEpts~LD~~~~~~i~~~l-~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y 563 (585)
T TIGR01192 485 AILKNAPILVLDEATSALDVETEARVKNAI-DALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKDGRF 563 (585)
T ss_pred HHhcCCCEEEEECCccCCCHHHHHHHHHHH-HHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCCChH
Confidence 999999999999999999999999997655 4445789999999999999999999999999999999999999988888
Q ss_pred HHHHHH
Q 000438 863 GALVAA 868 (1510)
Q Consensus 863 ~~l~~~ 868 (1510)
.++...
T Consensus 564 ~~l~~~ 569 (585)
T TIGR01192 564 YKLLRR 569 (585)
T ss_pred HHHHHh
Confidence 887654
No 79
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.1e-59 Score=555.23 Aligned_cols=528 Identities=22% Similarity=0.276 Sum_probs=416.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 333 TAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITSLYRKG 412 (1510)
Q Consensus 333 ~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR~~L~~~Iy~K~ 412 (1510)
.+++.++..++...+-.++-..++-+-..+. ...-+.++++++++.++.+++.---....++.+.++|..|...+++|.
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~-~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l 83 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQL-FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKL 83 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666666666654433321 222345666777777788888777777888999999999999999999
Q ss_pred hcCChhhhccCCHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 413 LRLSCSARQAHGVGQIVNYMAVDAQQLSDMML----QLHAVWLMPLQISVALILLYNCLGASVITTVVGIIGVMIFVVMG 488 (1510)
Q Consensus 413 L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~----~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~~l~~~~~~~~ 488 (1510)
.+++...-+..++|++.++++.-++.+..++. .....-..|+-+.++++++.+.-|.-.+..+..+.+ +.+.+
T Consensus 84 ~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPl---fMilv 160 (559)
T COG4988 84 AKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPL---FMILV 160 (559)
T ss_pred HhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH---HHHHH
Confidence 99998888888999999999999999887753 334444567767776666654433322222222222 22334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 489 TKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRI----LSFRESEFGWLTKFMYSISGNIIVMWSTPVL 564 (1510)
Q Consensus 489 ~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I----~~~R~~El~~l~~~~~~~a~~~~~~~~~p~~ 564 (1510)
++..++..+++++.-..=-...-+-|+|+.++|.|+-.+...++| ++.|+.-|+.||-.....++.-++... .+.
T Consensus 161 g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~l-siA 239 (559)
T COG4988 161 GLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYL-SIA 239 (559)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 556666666666665555556678899999999999766555555 778999999998876665555443332 222
Q ss_pred HHHHHHHHHHHhc-CccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccc-cCCCCCC
Q 000438 565 ISTLTFATALLFG-VPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVER-VEGCDDN 642 (1510)
Q Consensus 565 v~~~tF~~~~l~~-~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~-~~~~~~~ 642 (1510)
+..+.++ .-+.+ ++++-...|.+|-+---.-.|++.+...+..-.++..+.+++..|++.++...+..+. .......
T Consensus 240 lvAv~~g-~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~ 318 (559)
T COG4988 240 LVAVYIG-FRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPP 318 (559)
T ss_pred HHHHHHH-HHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCC
Confidence 2333333 34556 5999999999998888888999999999999999999999999999988765433221 1111123
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------e
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------T 709 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ 709 (1510)
..++.+|++|.|++. +++++|+||++++|++++|+|+||||||||+++|+|+.+|++|+|.++| +
T Consensus 319 ~ei~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~ 396 (559)
T COG4988 319 IEISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQ 396 (559)
T ss_pred ceeeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhH
Confidence 345556999999753 3899999999999999999999999999999999999999999999998 3
Q ss_pred EEEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000438 710 TAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1510)
Q Consensus 710 iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~ 788 (1510)
++||+|+|.++.+|+||||.++.+ -+++...++++..++.+.++. |.|.+|.+||+|.+|||||+|||+||||+++++
T Consensus 397 i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~ 475 (559)
T COG4988 397 ISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPA 475 (559)
T ss_pred eeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCC
Confidence 899999999999999999999988 456677888999999998888 999999999999999999999999999999999
Q ss_pred CEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHHH
Q 000438 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVAA 868 (1510)
Q Consensus 789 ~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~ 868 (1510)
++|||||||++||+++++.|.+. +..+.++||+|+|||+++.+..+|+|++|++|+++++|+++++.++++.|.+++.+
T Consensus 476 ~l~llDEpTA~LD~etE~~i~~~-l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~~ 554 (559)
T COG4988 476 SLLLLDEPTAHLDAETEQIILQA-LQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLKQ 554 (559)
T ss_pred CEEEecCCccCCCHhHHHHHHHH-HHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHHH
Confidence 99999999999999999888755 44556789999999999999999999999999999999999999999999999876
Q ss_pred hh
Q 000438 869 HE 870 (1510)
Q Consensus 869 ~~ 870 (1510)
++
T Consensus 555 q~ 556 (559)
T COG4988 555 QE 556 (559)
T ss_pred Hh
Confidence 43
No 80
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=5.8e-59 Score=589.35 Aligned_cols=511 Identities=19% Similarity=0.196 Sum_probs=394.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 326 FWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTS-GKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTL 404 (1510)
Q Consensus 326 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR~~L 404 (1510)
+|+.++...++.++..++..+.|++++.+++.+. .+. ....-+.+++.+++..++..++.....+...+++.++...+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (529)
T TIGR02857 1 ARRALALLGLLGALGALLIIAQAWLLARVIDGLISAGE-PLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQL 79 (529)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777888889999999999999999999773 322 11222334444555556666666666777788899999999
Q ss_pred HHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 405 ITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVGIIGVMI 483 (1510)
Q Consensus 405 ~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~~l~~~ 483 (1510)
...+|+|.++++.....++++|+++|.++.|++++.+++. .+..+....+.+++++++++..-.+.+++.++.+++...
T Consensus 80 r~~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 80 RERLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999999998888889999999999999999998764 355555555555554444332111111222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 484 FVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWSTPV 563 (1510)
Q Consensus 484 ~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~~~~p~ 563 (1510)
+...+.++.++..++.++..+++.+.+.|.++|+++||.|++|+.+.++..+.-++-.+...+.....+....+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23455677777788888999999999999999999999999999988888655443322222222111211111111111
Q ss_pred HH--HHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccccCCCCC
Q 000438 564 LI--STLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDD 641 (1510)
Q Consensus 564 ~v--~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~ 641 (1510)
+. .++.++.+....+.+|.+.+++++.+...+..|+..+...+..+.+++++++|+.++++.++.+.+... .+ ...
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~~-~~-~~~ 317 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKAP-VT-AAP 317 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcC-CC-CCC
Confidence 11 112234444456789999999999999999999999999999999999999999999975432211111 11 111
Q ss_pred CccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------
Q 000438 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------ 709 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------ 709 (1510)
...|+++|++|+|++. ++++|+|+||++++||+++|+|++|||||||+++|+|+++|++|+|.++|.
T Consensus 318 ~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~ 396 (529)
T TIGR02857 318 APSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRD 396 (529)
T ss_pred CCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHh
Confidence 2469999999999743 357999999999999999999999999999999999999999999999983
Q ss_pred -EEEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000438 710 -TAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1510)
Q Consensus 710 -iayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~ 787 (1510)
++||+|+|+++++|++|||.+|.+ .+++...++++.+++.++++.+|.|.+|.+||+|.+||||||||++||||++++
T Consensus 397 ~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~ 476 (529)
T TIGR02857 397 QIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRD 476 (529)
T ss_pred heEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcC
Confidence 899999999999999999999865 466778889999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEE
Q 000438 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVM 841 (1510)
Q Consensus 788 ~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l 841 (1510)
|+++|||||||+||+++++.+++.+. ...+++|+|+|||+++.+..||+|++|
T Consensus 477 ~~ililDE~ts~lD~~~~~~i~~~l~-~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 477 APLLLLDEPTAHLDAETEALVTEALR-ALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCEEEEeCcccccCHHHHHHHHHHHH-HhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999986654 445789999999999999999999985
No 81
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-61 Score=612.16 Aligned_cols=199 Identities=20% Similarity=0.334 Sum_probs=168.9
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++. .+++
T Consensus 312 ~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ig 378 (638)
T PRK10636 312 LLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKLG 378 (638)
T ss_pred eEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEEE
Confidence 5999999999964 35999999999999999999999999999999999999999999999741 2699
Q ss_pred EecCcc--ccCc-ccHHHhcCCC-CCCCHHHHHHHHHHcCchH-HHHhCcCCccccccCCCCCCChhHHHHHHHHHHHcc
Q 000438 1347 IIPQEP--VLFE-GTVRSNIDPI-GQYSDEEIWKSLERCQLKD-VVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1510)
Q Consensus 1347 iIpQdp--~LF~-gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1421 (1510)
|+||++ .+.. .|+.+++... ....++++.++|+..++.. .... ++ ..||||||||++||||+++
T Consensus 379 y~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~-------~~----~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 379 YFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGDKVTE-------ET----RRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred EecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChhHhcC-------ch----hhCCHHHHHHHHHHHHHhc
Confidence 999985 3443 3888887321 2334567888899888853 3322 22 3689999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEE-EecChhHHhc
Q 000438 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAK-EFGKPSRLLE 1491 (1510)
Q Consensus 1422 ~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~iv-E~gsp~~Ll~ 1491 (1510)
+|+||||||||++||..+...+.+.|++. +.|||+|+|+++.+.. ||||++|++|+++ ..|++++..+
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 99999999999999999999999999875 4599999999999987 9999999999998 5688888743
No 82
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.8e-59 Score=600.28 Aligned_cols=200 Identities=21% Similarity=0.327 Sum_probs=167.6
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
-++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +|+
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 4899999999964 35999999999999999999999999999999999999999999999 4332 599
Q ss_pred EecCcc-ccCcc-cHHHhcCCC-CCC--C--HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1347 IIPQEP-VLFEG-TVRSNIDPI-GQY--S--DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1347 iIpQdp-~LF~g-TIR~NLdp~-~~~--s--d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
|+||++ .++.. |+++|+... ... . +.++.+.|+..++.... .+.++ ..||||||||++|||||
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~----~~LSgGekqRl~la~al 455 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPKR------AMTPV----KALSGGERNRLLLARLF 455 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHHH------HhChh----hhCCHHHHHHHHHHHHH
Confidence 999986 46654 999999632 111 2 45677778887774211 22233 36999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEe-CCEEEEe-cChhHHhc
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVD-AGWAKEF-GKPSRLLE 1491 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~-~G~ivE~-gsp~~Ll~ 1491 (1510)
+++|++|||||||++||..+...+.+.|++. ++|||+|||+.+.+.. ||+|++|+ +|++.++ |++++.++
T Consensus 456 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 456 LKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 9999999999999999999999999999874 5699999999999976 99999998 8999886 67777643
No 83
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.5e-58 Score=627.58 Aligned_cols=211 Identities=21% Similarity=0.294 Sum_probs=177.3
Q ss_pred eEEEEEEEEEecC-----------CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC--CCcEEEEcCeeC
Q 000438 1267 NVDLIDLQVRYRS-----------NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP--SGGRIIIDGIDI 1333 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~-----------~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep--~~G~I~IDG~dI 1333 (1510)
.+.|+||++.++. +...+|+|||++++|||.+||+|+||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6899999988742 123599999999999999999999999999999999999763 689999999886
Q ss_pred CCCCHHHhhcceEEecCccccCc-ccHHHhcCCC------CCCCHH----HHHHHHHHcCchHHHHhCcCCccccccCCC
Q 000438 1334 SLLGLHDLRSRFGIIPQEPVLFE-GTVRSNIDPI------GQYSDE----EIWKSLERCQLKDVVAAKPDKLDSLVADSG 1402 (1510)
Q Consensus 1334 ~~i~l~~LR~~i~iIpQdp~LF~-gTIR~NLdp~------~~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1402 (1510)
. ....|+.++||+|++.++. .|+||||... ...+++ .+.++++..+|.+. .|+.+|..+
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 4 2456788999999998776 4999999521 123333 36778888888654 356665443
Q ss_pred -CCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhh-h-hhcCEEEEEeC-
Q 000438 1403 -DNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPT-V-MDCDRVIVVDA- 1477 (1510)
Q Consensus 1403 -~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~t-i-~~~DrIlVL~~- 1477 (1510)
..||||||||++|||||+.+|+||+||||||+||+.+...|.+.|++.. +++|||+++|+++. + ..||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 5799999999999999999999999999999999999999999999864 47899999999984 4 45999999996
Q ss_pred CEEEEecChh
Q 000438 1478 GWAKEFGKPS 1487 (1510)
Q Consensus 1478 G~ivE~gsp~ 1487 (1510)
|+++++|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999874
No 84
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.8e-56 Score=618.02 Aligned_cols=472 Identities=18% Similarity=0.176 Sum_probs=366.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 393 SQKLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASV 471 (1510)
Q Consensus 393 ~~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~ 471 (1510)
....+.+.-..+-..+|+|.++.+....++.++|+|+|.++.|++.+.+.+. .+..+...++.++.++++++..-.+.+
T Consensus 1029 ~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~ 1108 (1522)
T TIGR00957 1029 VSIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAA 1108 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666667777788999999999888889999999999999999998765 344555566666666555543222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 472 ITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSI 551 (1510)
Q Consensus 472 l~gl~~~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~ 551 (1510)
++.++++++...+..+..+..+..++.....+.......+|.++|+++||.|+||+.|.++..+.-+...+.........
T Consensus 1109 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 1188 (1522)
T TIGR00957 1109 VIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVAN 1188 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222333333444455555555666777789999999999999999999998887666555444322221111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcc
Q 000438 552 SGNIIVMWSTPVLISTLTFATALL-FGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVN 630 (1510)
Q Consensus 552 a~~~~~~~~~p~~v~~~tF~~~~l-~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~ 630 (1510)
............++ ++..+.+.. ..+.++++.+..++.+...+..|+..+......+.++.+|.+||.+|++.++..+
T Consensus 1189 ~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~ 1267 (1522)
T TIGR00957 1189 RWLAVRLECVGNCI-VLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAP 1267 (1522)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 11111111111111 111222222 3467999999999999999999999999999999999999999999997654322
Q ss_pred cccc--ccCC-CCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEEC
Q 000438 631 ESVE--RVEG-CDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVC 707 (1510)
Q Consensus 631 ~~~~--~~~~-~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~ 707 (1510)
...+ ..+. -+.++.|+++|++|+|+++ .+++|+|+||+|++||++||||++|||||||+++|+|.++|++|+|.++
T Consensus 1268 ~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~Id 1346 (1522)
T TIGR00957 1268 WQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIID 1346 (1522)
T ss_pred ccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEEC
Confidence 1111 1111 0234679999999999753 3479999999999999999999999999999999999999999999999
Q ss_pred C-------------eEEEEcCCCcCCCccHHHHHh-cCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChH
Q 000438 708 G-------------TTAYVAQTSWIQNGTIEENIL-FGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGG 773 (1510)
Q Consensus 708 g-------------~iayv~Q~~~i~~~Tv~enI~-fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGG 773 (1510)
| +++||||+|.+|++||||||. ++ +++++...++++.|++.+.+..+|.|.+|.+||+|.+||||
T Consensus 1347 G~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgG 1425 (1522)
T TIGR00957 1347 GLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVG 1425 (1522)
T ss_pred CEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHH
Confidence 8 379999999999999999998 55 56777788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChH
Q 000438 774 QKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYN 853 (1510)
Q Consensus 774 QkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~ 853 (1510)
||||++||||++++|+|+|||||||+||+++.+.|.+ .++...+++|+|+|+|+++.+..+|+|+||++|+|++.|+++
T Consensus 1426 QrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~-~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~ 1504 (1522)
T TIGR00957 1426 QRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQS-TIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPS 1504 (1522)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHH
Confidence 9999999999999999999999999999999887764 455556899999999999999999999999999999999999
Q ss_pred HHHhcCcchHHHHHH
Q 000438 854 ALLNSGMDFGALVAA 868 (1510)
Q Consensus 854 ~l~~~~~~f~~l~~~ 868 (1510)
|++++++.|.++.++
T Consensus 1505 eLl~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1505 NLLQQRGIFYSMAKD 1519 (1522)
T ss_pred HHHhCCCHHHHHHHH
Confidence 999888889888754
No 85
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=8.7e-58 Score=527.81 Aligned_cols=524 Identities=19% Similarity=0.232 Sum_probs=372.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccC-CCCCCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000438 955 LLLSVAWQGSLMAGDYWLSYETSED-HSMSFNPSLFIGV-YGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILH 1032 (1510)
Q Consensus 955 ~~~~~~~~~~~~~~~~wl~~~~~~~-~~~~~~~~~~~~v-y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~ 1032 (1510)
.+++.+..++...++.|+-..-|.. ...+..+...+.+ -..+.++..++..+|+..+.+.+.+.-..+....+...++
T Consensus 29 ~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~ 108 (580)
T COG4618 29 GLFSAVINLLALTGPLYMLQVYDRVLPSRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFS 108 (580)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHh
Confidence 3444555555555665553222211 1112222233322 2344556778889999999999999999999999999988
Q ss_pred CCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 1033 APMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSR 1112 (1510)
Q Consensus 1033 ~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r 1112 (1510)
+|..--...+....+ +|.+.+..++...-...+.-.-..-..+.+++...|++.++.+.-.++.+.+...--...|
T Consensus 109 ~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~ 184 (580)
T COG4618 109 APLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATR 184 (580)
T ss_pred hHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 776543333233333 4666666665432111111111111223344445555544433322222222222222233
Q ss_pred HHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHH----HHHHHHHHHhhhHHHHHhHhhHH-HHHHHHHHHHHHHH
Q 000438 1113 ELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQ----ENVNRVNGNLRMDFHNNGSNEWL-GFRLELLGSFTFCL 1187 (1510)
Q Consensus 1113 ~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~----~~~~~~d~~~~~~~~~~~~~~wl-~~~l~~l~~~~~~~ 1187 (1510)
+--+..++....-..+..-+..+..+|+|.|......+ .+.+.++.+.++.........-- .+|+ ++...+
T Consensus 185 ~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm-~lQs~i--- 260 (580)
T COG4618 185 KPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRM-ALQSAV--- 260 (580)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-HHHHHH---
Confidence 33333444455566788889999999999998765444 44455555444433322111100 0111 111111
Q ss_pred HHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCce
Q 000438 1188 ATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGN 1267 (1510)
Q Consensus 1188 ~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~ 1267 (1510)
..+.+++...+.+++|.+-..--..-....++-..+..|.+.-....|..|+.+..+..++.....+ .|. .+|.
T Consensus 261 Lg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~m~--LP~----P~g~ 334 (580)
T COG4618 261 LGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAERMP--LPA----PQGA 334 (580)
T ss_pred HhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCC--CCC----CCce
Confidence 1222333446777777543322112223345667788899999999999999999875544332211 111 2589
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
+.++++++.-++...++|+|+||+++|||-+|||||||||||||.++|.|...|.+|.|.+||-|+++.+.+++=++|||
T Consensus 335 L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGY 414 (580)
T COG4618 335 LSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGY 414 (580)
T ss_pred eeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCc
Confidence 99999999766666789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCccccCcccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 000438 1348 IPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLL 1426 (1510)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kIL 1426 (1510)
.|||-.||+|||+|||.-|+ +.+++.|.+|.+.++.||.|.++|+||||.|||+|..|||||||||+|||||..+|+++
T Consensus 415 LPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lv 494 (580)
T COG4618 415 LPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLV 494 (580)
T ss_pred CcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEE
Confidence 99999999999999998887 77888899999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcC
Q 000438 1427 FMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1427 iLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
|||||-||||.+-|+.+.++|.+.. +++|+|+||||.+.+..+|+|+||++|++..||+-+|.+++
T Consensus 495 VLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 495 VLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred EecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 9999999999999999999998764 68999999999999999999999999999999999998864
No 86
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=7.6e-58 Score=585.68 Aligned_cols=198 Identities=19% Similarity=0.287 Sum_probs=166.6
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
..++++|++++|+++ +.+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+++ +.++
T Consensus 507 ~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 507 PIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred ceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 469999999999643 3589999999999999999999999999999999999999999999875 3579
Q ss_pred EEecCccccCcccHHHhcC-----CCCCCCHHHHHHHHHHcCchH-HHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1346 GIIPQEPVLFEGTVRSNID-----PIGQYSDEEIWKSLERCQLKD-VVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1346 ~iIpQdp~LF~gTIR~NLd-----p~~~~sd~eI~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+|+||++. ...++.+|.. .+...+++++.++|+..++.+ ..... ...||||||||++||||+
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~~~~-----------~~~LSgGqkqRvaLAraL 642 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQP-----------MYTLSGGQKSRVAFAKIT 642 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHhcCC-----------ccccCHHHHHHHHHHHHH
Confidence 99999973 2224444421 122456788999999999864 32222 246999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEE-EecChhHH
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAK-EFGKPSRL 1489 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~iv-E~gsp~~L 1489 (1510)
+++|++|||||||++||+.+...+.+.|++. +.|||+|||+++.+.. ||||++|++|+++ ..|++++.
T Consensus 643 ~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~ 712 (718)
T PLN03073 643 FKKPHILLLDEPSNHLDLDAVEALIQGLVLF--QGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDY 712 (718)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHH
Confidence 9999999999999999999999999998864 3599999999999987 9999999999998 46777664
No 87
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.6e-57 Score=557.82 Aligned_cols=484 Identities=24% Similarity=0.373 Sum_probs=346.0
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--eEEEEcCCCcCC-
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--TTAYVAQTSWIQ- 720 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~iayv~Q~~~i~- 720 (1510)
.|.++|++++|+ ++++|+|+||++.+|+.+||||+||+||||||++|.|++.|++|+|...+ +++|++|++...
T Consensus 3 ~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~~ 79 (530)
T COG0488 3 MITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLDP 79 (530)
T ss_pred eEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcCC
Confidence 588999999994 46899999999999999999999999999999999999999999999987 799999998876
Q ss_pred CccHHHHHhcCCCCCh---hhHHHHHHH-------------------------hchHHHHHhcccCCcccccCCCCccCh
Q 000438 721 NGTIEENILFGLPMNR---AKYGEVVRV-------------------------CCLEKDLEMMEYGDQTEIGERGINLSG 772 (1510)
Q Consensus 721 ~~Tv~enI~fg~~~~~---~~~~~v~~~-------------------------~~l~~dl~~l~~gd~t~ig~~g~~LSG 772 (1510)
..||.|.++.|...-. ..|+..... ......+..+ |.... .....+|||
T Consensus 80 ~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~~-~~~~~~LSG 156 (530)
T COG0488 80 EKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPDE-DRPVSSLSG 156 (530)
T ss_pred CccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCcc-cCchhhcCH
Confidence 4599999998753110 111111100 0011111222 22222 456678999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEE-EEec
Q 000438 773 GQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMI-VQSG 850 (1510)
Q Consensus 773 GQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i-~~~g 850 (1510)
|||.||+|||||..+||++||||||++||..+.+.+-+ .+.. .+| |+|+||||.+||.. |++|+.++.|++ .+.|
T Consensus 157 G~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~-~L~~-~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~G 233 (530)
T COG0488 157 GWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLED-YLKR-YPG-TVIVVSHDRYFLDNVATHILELDRGKLTPYKG 233 (530)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHH-HHHh-CCC-cEEEEeCCHHHHHHHhhheEEecCCceeEecC
Confidence 99999999999999999999999999999999877743 3332 346 99999999999987 899999999987 4678
Q ss_pred ChHHHHhcCcchHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHHHhc
Q 000438 851 RYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERET 930 (1510)
Q Consensus 851 ~~~~l~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~ 930 (1510)
+|+...+.. ....+... .. .+ ...+..+.+
T Consensus 234 ny~~~~~~r----------~~~~~~~~------------------------~~-----------~~-~~~~~~~~~---- 263 (530)
T COG0488 234 NYSSYLEQK----------AERLRQEA------------------------AA-----------YE-KQQKELAKE---- 263 (530)
T ss_pred CHHHHHHHH----------HHHHHHHH------------------------HH-----------HH-HHHHHHHHH----
Confidence 777665421 11000000 00 00 000000000
Q ss_pred CcchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 931 GKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYF 1010 (1510)
Q Consensus 931 g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~ 1010 (1510)
..+++
T Consensus 264 --------~~~i~------------------------------------------------------------------- 268 (530)
T COG0488 264 --------QEWIR------------------------------------------------------------------- 268 (530)
T ss_pred --------HHHHH-------------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000438 1011 VTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTI 1090 (1510)
Q Consensus 1011 ~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 1090 (1510)
|+..
T Consensus 269 --------------------------------------r~~~-------------------------------------- 272 (530)
T COG0488 269 --------------------------------------RGKA-------------------------------------- 272 (530)
T ss_pred --------------------------------------HHHh--------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHh
Q 000438 1091 FLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSN 1170 (1510)
Q Consensus 1091 ~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~ 1170 (1510)
...++
T Consensus 273 ----------------~~~~~----------------------------------------------------------- 277 (530)
T COG0488 273 ----------------AASKA----------------------------------------------------------- 277 (530)
T ss_pred ----------------ccchH-----------------------------------------------------------
Confidence 00000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHh--hcCccc
Q 000438 1171 EWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQF--TEIPSE 1248 (1510)
Q Consensus 1171 ~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~--~~~~~E 1248 (1510)
...+..+...+++.+- ...|.+
T Consensus 278 --------------------------------------------------------k~a~sr~k~l~k~~~~~~~~~~~~ 301 (530)
T COG0488 278 --------------------------------------------------------KKAKSRIKRLEKLEARLAEERPVE 301 (530)
T ss_pred --------------------------------------------------------HHHHHHHHHHHHHHhhhhhccccc
Confidence 0001111122222211 011111
Q ss_pred ccccccCCCCCCC-CCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEE
Q 000438 1249 AAWKMEDRLPPPN-WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRII 1327 (1510)
Q Consensus 1249 ~~~~~~~~~~~~~-wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~ 1327 (1510)
.........+++. -..+-.++++|+++.|.++ .++++++||.|.+|+|||||||||+|||||+++|.|-..|.+|+|.
T Consensus 302 ~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~ 380 (530)
T COG0488 302 EGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVK 380 (530)
T ss_pred ccccceeeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEE
Confidence 0000000011111 1223468999999999765 5699999999999999999999999999999999999999999998
Q ss_pred EcCeeCCCCCHHHhhcceEEecCcc-ccC-cccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCC
Q 000438 1328 IDGIDISLLGLHDLRSRFGIIPQEP-VLF-EGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN 1404 (1510)
Q Consensus 1328 IDG~dI~~i~l~~LR~~i~iIpQdp-~LF-~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1404 (1510)
+.- .-++||.+|+- .++ +.|+-+++.... +..+.++...|.+.++...-... +| ..
T Consensus 381 ~g~-----------~v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~~~~------~v----~~ 439 (530)
T COG0488 381 VGE-----------TVKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGEDQEK------PV----GV 439 (530)
T ss_pred eCC-----------ceEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChHHHhC------ch----hh
Confidence 863 13599999998 444 338999996543 44489999999999997654433 33 26
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000438 1405 WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1405 LS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1483 (1510)
||||||-|+.||+.++.+|.+|||||||.+||.+|-..+.++|.+ -+.|||+|+|+...+.. |++|+++++ ++.++
T Consensus 440 LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~--f~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~ 516 (530)
T COG0488 440 LSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLD--FEGTVLLVSHDRYFLDRVATRIWLVED-KVEEF 516 (530)
T ss_pred cCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEEEEcC-ceeEc
Confidence 999999999999999999999999999999999999999999987 36799999999999988 999999999 88888
Q ss_pred -cChhHHhcCC
Q 000438 1484 -GKPSRLLERP 1493 (1510)
Q Consensus 1484 -gsp~~Ll~~~ 1493 (1510)
|.+++.++..
T Consensus 517 ~g~y~~y~~~~ 527 (530)
T COG0488 517 EGGYEDYLEQK 527 (530)
T ss_pred CCCHHHHHHhh
Confidence 8888877643
No 88
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.1e-55 Score=513.49 Aligned_cols=518 Identities=24% Similarity=0.300 Sum_probs=407.4
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCC-C--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCh
Q 000438 341 LCVMYVGPVLIQRFVDFTSGKSS-S--FYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITSLYRKGLRLSC 417 (1510)
Q Consensus 341 ~~~~~~~P~ll~~li~~~~~~~~-~--~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR~~L~~~Iy~K~L~ls~ 417 (1510)
-.+....|++++..++-+++-+. + .......+.+++++.+..+++.-.-.+....+..++--.....+|++.+.++.
T Consensus 43 K~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~ 122 (591)
T KOG0057|consen 43 KILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDL 122 (591)
T ss_pred hHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 45556679999999998863222 2 11234556667777777777777777777777777777778889999999999
Q ss_pred hhhccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Q 000438 418 SARQAHGVGQIVNYMAVDAQQLSDMMLQ-LHAVWLMPLQISVALILLYNCLGASVITTVVG-IIGVMIFVVMGTKRNNRF 495 (1510)
Q Consensus 418 ~~~~~~~~G~ivNlms~D~~ri~~~~~~-~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~-~~l~~~~~~~~~~~~~~~ 495 (1510)
+...+..+|++.+.|.--...|.+++.. +..+.-..+++.+....+|...|++..+-.++ +..-..+...++.+-.++
T Consensus 123 ~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~f 202 (591)
T KOG0057|consen 123 SFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRF 202 (591)
T ss_pred HhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHH
Confidence 9888899999999999988888888754 33444455678888888999999766544333 333344556678888999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Q 000438 496 QFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILS-FRESEFGWLTKFMYSISGNI---IVMWSTPVLISTLTFA 571 (1510)
Q Consensus 496 q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~-~R~~El~~l~~~~~~~a~~~---~~~~~~p~~v~~~tF~ 571 (1510)
++++.++.|+-.+..-+.|.|-.+||.|+-|+.-.+|... +++.|-..++....+...+. .+|. +| ++.++..+
T Consensus 203 R~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFs-v~-~~~im~l~ 280 (591)
T KOG0057|consen 203 RKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFS-VA-LTFIMVLG 280 (591)
T ss_pred HHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHH-HH-HHHHHHHH
Confidence 9999999999999999999999999999999988887744 34444444333332222221 1111 11 11111112
Q ss_pred HHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccccCCCCCCccEEEeeeE
Q 000438 572 TALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEVRDGV 651 (1510)
Q Consensus 572 ~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~ 651 (1510)
..-...+.+|.+...-.-+++..|+.|+..|...+..+.|+..-..-+...+..++...+. ..|....+..|+++|++
T Consensus 281 ~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~--~~~i~~~~~~I~F~dV~ 358 (591)
T KOG0057|consen 281 SNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQEA--ALPIELFGGSIEFDDVH 358 (591)
T ss_pred hhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhhc--cCCcccCCCcEEEEeeE
Confidence 2223455799999988999999999999999999999999888777665554433322211 11222244579999999
Q ss_pred EEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------EEEEcCCCc
Q 000438 652 FSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------TAYVAQTSW 718 (1510)
Q Consensus 652 f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------iayv~Q~~~ 718 (1510)
|+|++ ++++|+++||+|++||.+||+|+|||||||++++|++..+ .+|+|.++|. ||||||+..
T Consensus 359 f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~ 435 (591)
T KOG0057|consen 359 FSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSV 435 (591)
T ss_pred EEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCccc
Confidence 99974 4579999999999999999999999999999999999999 9999999993 899999999
Q ss_pred CCCccHHHHHhcCCCCChhhHHHHHHHh---chHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeC
Q 000438 719 IQNGTIEENILFGLPMNRAKYGEVVRVC---CLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDD 795 (1510)
Q Consensus 719 i~~~Tv~enI~fg~~~~~~~~~~v~~~~---~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDe 795 (1510)
+||.||.+||.+|.+.- .+++|.++| ++++-+..+|+|++|.+||+|..|||||||||+||||+.+||+|+++||
T Consensus 436 LFndTIl~NI~YGn~sa--s~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DE 513 (591)
T KOG0057|consen 436 LFNDTILYNIKYGNPSA--SDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDE 513 (591)
T ss_pred ccchhHHHHhhcCCCCc--CHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecC
Confidence 99999999999998853 234455554 6888899999999999999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHHH
Q 000438 796 VFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVAA 868 (1510)
Q Consensus 796 p~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~ 868 (1510)
|||+||.++++.+++.+.. ...|||+|+|-|+++.++.+|+|+++++|++.+.|+++|++..++.|.++...
T Consensus 514 aTS~LD~~TE~~i~~~i~~-~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~~ 585 (591)
T KOG0057|consen 514 ATSALDSETEREILDMIMD-VMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWTT 585 (591)
T ss_pred cccccchhhHHHHHHHHHH-hcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhcc
Confidence 9999999999999976544 77899999999999999999999999999999999999999987778777643
No 89
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.3e-54 Score=507.02 Aligned_cols=475 Identities=24% Similarity=0.349 Sum_probs=362.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 377 VAKFVEVFSTHQFNFNSQKLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQI 456 (1510)
Q Consensus 377 ~~~~~~~l~~~~~~~~~~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~~~~~w~~plqi 456 (1510)
++..++.+..|+..| |+-+.+.-.+|+|...++..-......|++.|.+..|++.+++.+......|...+-+
T Consensus 73 ~~RY~ERlvsH~Atf-------rvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~ 145 (573)
T COG4987 73 AARYVERLVSHDATF-------RVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVL 145 (573)
T ss_pred HHHHHHHHhhhHHHH-------HHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHH
Confidence 334445555555444 5777778889999999999888888999999999999999999999888888776655
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHH
Q 000438 457 SVALILL--YNCLGASVITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRIL 534 (1510)
Q Consensus 457 ~lal~lL--~~~lG~s~l~gl~~~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~ 534 (1510)
+++..+. |..++.+.+.++...++++.+.....+..++..++..+.+..--.-..+.+.|+.-++++|-++.|.++++
T Consensus 146 ~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~ 225 (573)
T COG4987 146 IAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALE 225 (573)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHH
Confidence 5544433 44555666666665555555556666777777766666666666778899999999999999999988765
Q ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHH-HHHHHHHHH--HHHHHHHhcCccC-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 535 SFRESEFGWLTKFM---YSISGNIIVMW-STPVLISTL--TFATALLFGVPLD-AGSVFTTTTIFKILQEPIRNFPQSMI 607 (1510)
Q Consensus 535 ~~R~~El~~l~~~~---~~~a~~~~~~~-~~p~~v~~~--tF~~~~l~~~~Lt-a~~vFt~lalf~iL~~pl~~lp~~i~ 607 (1510)
+ .|..|.+... .......+... ....+++.. +++.-.-.|+ .+ +..+...+..|..+-.-....|.++.
T Consensus 226 ~---~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~-~~~~~aa~~ll~~f~~~eaf~~L~~~A~~ 301 (573)
T COG4987 226 A---TEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGA-LAQPGAALALLVIFAALEAFEPLAPGAFQ 301 (573)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCC-cchhHHHHHHHHHHHHHHHHhhhcchhHH
Confidence 4 3444433222 22222222222 222222211 1211112232 33 22222222223322222223347778
Q ss_pred HHHHHHHHHHHHHHHhccccCccccccccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChH
Q 000438 608 SLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKS 687 (1510)
Q Consensus 608 ~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKS 687 (1510)
.+.|...|.+|+.+.+++++......+..+. .+..++++|++|+|+++ +.++|+|+||++++||++||+|++|||||
T Consensus 302 ~lgq~~~Sa~Rl~~i~~q~~e~~~~~~~~~~--~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKS 378 (573)
T COG4987 302 HLGQVIASARRLNDILDQKPEVTFPDEQTAT--TGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKS 378 (573)
T ss_pred HhhHHHHHHHHHhhhccCCcccCCCccccCC--ccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHH
Confidence 8899999999999999876543322111121 22389999999999864 45899999999999999999999999999
Q ss_pred HHHHHHhcCcccCCcEEEECC-------------eEEEEcCCCcCCCccHHHHHhcCCCC-ChhhHHHHHHHhchHHHHH
Q 000438 688 SLLASILGEMHKISGKVKVCG-------------TTAYVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLE 753 (1510)
Q Consensus 688 TLl~~llG~~~~~~G~i~~~g-------------~iayv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~ 753 (1510)
||++.+.|.++|++|+|.++| .+++++|.+.+|++|+|||+..++|. ..+...++++..+|++-++
T Consensus 379 TllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~ 458 (573)
T COG4987 379 TLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLE 458 (573)
T ss_pred HHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHH
Confidence 999999999999999999998 36899999999999999999999885 3455667899999999999
Q ss_pred hcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccc
Q 000438 754 MMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH 833 (1510)
Q Consensus 754 ~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~ 833 (1510)
..|+|.+|.+||.|..||||||||++|||++.+|+++.||||||.+||+.|++++.+.+. ...+|||+|+|||++..++
T Consensus 459 ~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~-~~~~~kTll~vTHrL~~le 537 (573)
T COG4987 459 SAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLF-EHAEGKTLLMVTHRLRGLE 537 (573)
T ss_pred hChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHH-HHhcCCeEEEEecccccHh
Confidence 999999999999999999999999999999999999999999999999999999997654 4457999999999999999
Q ss_pred cCCEEEEEeCCEEEEecChHHHHhcCcchHHHH
Q 000438 834 NVDLILVMREGMIVQSGRYNALLNSGMDFGALV 866 (1510)
Q Consensus 834 ~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~ 866 (1510)
.+|+|++|++|+++++|+|.+++.+++.|.++.
T Consensus 538 ~~drIivl~~Gkiie~G~~~~Ll~~~g~~~~l~ 570 (573)
T COG4987 538 RMDRIIVLDNGKIIEEGTHAELLANNGRYKRLY 570 (573)
T ss_pred hcCEEEEEECCeeeecCCHHhhhccccHHHHHh
Confidence 999999999999999999999999888887764
No 90
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=2.2e-57 Score=572.34 Aligned_cols=192 Identities=22% Similarity=0.337 Sum_probs=164.7
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.++++|++++|.. ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 5899999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred EecCcccc-CcccHHHhcCCC-CCC-CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000438 1347 IIPQEPVL-FEGTVRSNIDPI-GQY-SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1510)
Q Consensus 1347 iIpQdp~L-F~gTIR~NLdp~-~~~-sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1423 (1510)
|+||++.+ ++.|+++|+... ..+ .+..+.++|+..++.+.....+ .+||||||||++|||||+++|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~-----------~~LSGGe~QRvaiAraL~~~p 472 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLLDKNV-----------KDLSGGELQRVAIAACLSRDA 472 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHHhCCc-----------ccCCHHHHHHHHHHHHHhcCC
Confidence 99999875 466999999632 122 2345678899998876544333 358999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000438 1424 RLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKP 1486 (1510)
Q Consensus 1424 kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp 1486 (1510)
+||||||||++||.++...+.+.|++..+ ++|+|+|+|+++.+.. ||||++|++ ++...|+.
T Consensus 473 ~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~~ 537 (590)
T PRK13409 473 DLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGHA 537 (590)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeeec
Confidence 99999999999999999999999998643 7899999999999876 999999964 88777763
No 91
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=2.5e-55 Score=564.02 Aligned_cols=511 Identities=13% Similarity=0.091 Sum_probs=400.0
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCC-c----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 950 GVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFN-P----SLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFS 1024 (1510)
Q Consensus 950 ~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~-~----~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~ 1024 (1510)
.+++.+++.++...+.+..+++.....+........ . ..++.+++++.++..+..++...+......+..+.+|+
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~ 176 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLYS 176 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555666667777888888877666531111111 1 11223333444555556666666777778888888888
Q ss_pred HHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHH
Q 000438 1025 QILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQ-YAWPTIFLVIPLAWANYWY 1103 (1510)
Q Consensus 1025 ~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~ipl~~~~~~~ 1103 (1510)
+.+++....++.|||. ++|++++|+++|++.+...+...+..++..++.+++.+++++. .+|.+.++++...++..++
T Consensus 177 ~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i 255 (659)
T TIGR00954 177 KYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVV 255 (659)
T ss_pred HHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 8998888899999997 8899999999999999999999999999998888887777775 8888777776666677777
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHH
Q 000438 1104 RGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSF 1183 (1510)
Q Consensus 1104 ~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~ 1183 (1510)
.+++.+..+++.+......+.+.+.+.|.++|+.+||+|+.++...+++.+..++..+..........++....+++...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 335 (659)
T TIGR00954 256 LTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKY 335 (659)
T ss_pred HHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 77787777888888888888999999999999999999999999988888888887777777666666776666666542
Q ss_pred HHHHH-HH---HHHHhcc----CccChhH-HHHHHHH---HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccc
Q 000438 1184 TFCLA-TL---FMILLPS----SIIKPEN-VGLSLSY---GLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1510)
Q Consensus 1184 ~~~~~-~~---~~v~~~~----~~~~~g~-~Gl~l~y---~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~ 1251 (1510)
..... .+ ..+.... +.++.|. ++..++| ..++...+..+.....++.....+.+|+.++.+.++|...
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~~ 415 (659)
T TIGR00954 336 TWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVKS 415 (659)
T ss_pred HHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 21111 11 1122211 4566554 4434444 4566777888888999999999999999999876443210
Q ss_pred ------cccCCC--------CC-----C-CCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHH
Q 000438 1252 ------KMEDRL--------PP-----P-NWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTL 1311 (1510)
Q Consensus 1252 ------~~~~~~--------~~-----~-~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTL 1311 (1510)
..++.. ++ . .....+.|+++||+++|+.+ +++|+|+||+|++||++||+|+||||||||
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGKSTL 494 (659)
T TIGR00954 416 GNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGKSSL 494 (659)
T ss_pred ccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCCHHHH
Confidence 000000 00 0 01134679999999999744 359999999999999999999999999999
Q ss_pred HHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCC--------CCCCHHHHHHHHHHcCc
Q 000438 1312 IQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI--------GQYSDEEIWKSLERCQL 1383 (1510)
Q Consensus 1312 l~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~--------~~~sd~eI~~aL~~~~L 1383 (1510)
+++|.|+++|++|+|.+|+ |+++++|||+|.+|++|+|+|+... .+.++++++++++.+++
T Consensus 495 l~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l 563 (659)
T TIGR00954 495 FRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQL 563 (659)
T ss_pred HHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCC
Confidence 9999999999999999874 6789999999999999999999632 24678999999999999
Q ss_pred hHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecCh
Q 000438 1384 KDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRI 1463 (1510)
Q Consensus 1384 ~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl 1463 (1510)
.+++.. |.|+|+..+ .+.+||||||||++||||++++|++||||||||+||+++++.+++.+++ .++|+|+||||+
T Consensus 564 ~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~--~~~tvI~isH~~ 639 (659)
T TIGR00954 564 THILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCRE--FGITLFSVSHRK 639 (659)
T ss_pred HHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHH--cCCEEEEEeCch
Confidence 999877 999999876 5679999999999999999999999999999999999999999999987 389999999999
Q ss_pred hhhhhcCEEEEEeC
Q 000438 1464 PTVMDCDRVIVVDA 1477 (1510)
Q Consensus 1464 ~ti~~~DrIlVL~~ 1477 (1510)
+++..||+|++|+.
T Consensus 640 ~~~~~~d~il~l~~ 653 (659)
T TIGR00954 640 SLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHhCCEEEEEeC
Confidence 99999999999973
No 92
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.7e-54 Score=593.02 Aligned_cols=466 Identities=17% Similarity=0.154 Sum_probs=355.3
Q ss_pred HHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 402 CTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASVITTVVGIIG 480 (1510)
Q Consensus 402 ~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~~l 480 (1510)
..+-..+|++.++.+.....+.+.|+|+|.++.|++.+.+.+. .+..+....+.++.++++++..-.+.+++.+.++++
T Consensus 1031 ~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i~~~~~ 1110 (1560)
T PTZ00243 1031 RNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALVPCGYL 1110 (1560)
T ss_pred HHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555788999999999888889999999999999999998765 344555555556555555443222222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000438 481 VMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMW- 559 (1510)
Q Consensus 481 ~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~~- 559 (1510)
...+..++.+..+..++.....+..-....+|.++|+++||.|++|+.|.++..+.-+...+...+.............
T Consensus 1111 ~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~ 1190 (1560)
T PTZ00243 1111 YYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEF 1190 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223334445555666666667777789999999999999999999998888755444333322111111111111111
Q ss_pred HH-HHHHHHHHHHHHH--HhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcc-cc---
Q 000438 560 ST-PVLISTLTFATAL--LFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVN-ES--- 632 (1510)
Q Consensus 560 ~~-p~~v~~~tF~~~~--l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~-~~--- 632 (1510)
.. ...+.++.++++. .....++++.+..++.+...+..|+..+...+..+.++++|++||.+|++..+.++ ..
T Consensus 1191 l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~ 1270 (1560)
T PTZ00243 1191 LSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDE 1270 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccc
Confidence 11 1111122222222 12234788888888888888999999999999999999999999999996322110 00
Q ss_pred --------------------ccc-c-----CCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCCh
Q 000438 633 --------------------VER-V-----EGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGK 686 (1510)
Q Consensus 633 --------------------~~~-~-----~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGK 686 (1510)
.+. . +.....+.|+++|++|+|+++ .+++|+|+||+|++||++||||++||||
T Consensus 1271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~vL~~vsf~I~~GekVaIVGrTGSGK 1349 (1560)
T PTZ00243 1271 EVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLVLRGVSFRIAPREKVGIVGRTGSGK 1349 (1560)
T ss_pred cccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCceeecceEEECCCCEEEEECCCCCCH
Confidence 000 0 001123579999999999753 3469999999999999999999999999
Q ss_pred HHHHHHHhcCcccCCcEEEECC-------------eEEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHH
Q 000438 687 SSLLASILGEMHKISGKVKVCG-------------TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLE 753 (1510)
Q Consensus 687 STLl~~llG~~~~~~G~i~~~g-------------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~ 753 (1510)
|||+++|+|.++|++|+|.++| .++||||+|.+|++||||||..+..++++...++++.|++.+.++
T Consensus 1350 STLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~l~~~I~ 1429 (1560)
T PTZ00243 1350 STLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVGLRERVA 1429 (1560)
T ss_pred HHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHCCChHHHh
Confidence 9999999999999999999998 379999999999999999998776777788889999999999999
Q ss_pred hcccCCcccccCCCCccChHHHHHHHHHHHHhcC-CCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcc
Q 000438 754 MMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD-CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFL 832 (1510)
Q Consensus 754 ~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~-~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l 832 (1510)
.+|.|.+|.+||+|.+||||||||++||||++++ |+|+|||||||+||+++.+.|.+ .++...+++|+|+|+|+++.+
T Consensus 1430 ~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~-~L~~~~~~~TvI~IAHRl~ti 1508 (1560)
T PTZ00243 1430 SESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQA-TVMSAFSAYTVITIAHRLHTV 1508 (1560)
T ss_pred hCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHH-HHHHHCCCCEEEEEeccHHHH
Confidence 9999999999999999999999999999999996 89999999999999999998864 455566799999999999999
Q ss_pred ccCCEEEEEeCCEEEEecChHHHHh-cCcchHHHHHHh
Q 000438 833 HNVDLILVMREGMIVQSGRYNALLN-SGMDFGALVAAH 869 (1510)
Q Consensus 833 ~~~D~i~~l~~G~i~~~g~~~~l~~-~~~~f~~l~~~~ 869 (1510)
..||+|++|++|+|++.|+++|+++ .++.|.+++...
T Consensus 1509 ~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1509 AQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred HhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 9999999999999999999999997 478899887654
No 93
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-56 Score=502.36 Aligned_cols=526 Identities=21% Similarity=0.290 Sum_probs=382.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhH-HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 336 LAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEG-YYLVLILLVAKFV--EVFSTHQFNFNSQKLGMLIRCTLITSLYRKG 412 (1510)
Q Consensus 336 ~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g-~~l~~~l~~~~~~--~~l~~~~~~~~~~~~g~riR~~L~~~Iy~K~ 412 (1510)
+..+.-++....|.+.+.+++-+..+..+.+.- +.++++.|+-... ..+..+--.|..-++..-.--.+-..+||+.
T Consensus 223 ll~i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrHl 302 (790)
T KOG0056|consen 223 LLIIGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRHL 302 (790)
T ss_pred HHHHHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHHH
Confidence 333444455566999999998887554433322 2223222222111 1233333333322333333334556788998
Q ss_pred hcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Q 000438 413 LRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLH-AVWLMPLQISVALILLYNCLGASVITTVVGIIG---VMIFVVMG 488 (1510)
Q Consensus 413 L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~~~-~~w~~plqi~lal~lL~~~lG~s~l~gl~~~~l---~~~~~~~~ 488 (1510)
+.||-..--++.+||+...|..-...+. +..++. .+--..+.+++|++ |..+-.-...|+++++. ..-+...+
T Consensus 303 h~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~v--YF~~~Fn~wFgLIVfl~m~lY~~~Ti~i 379 (790)
T KOG0056|consen 303 HNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMV--YFFIKFNIWFGLIVFLMMLLYCYVTIKI 379 (790)
T ss_pred HhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhh--hhhhhHhHHHHHHHHHHHHHHhheeeee
Confidence 8888765555678999988877666655 443332 22222234444443 44444444455554433 22333344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 489 TKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDH----FNKRILSFRESEFGWLTKFMYSISGNIIVMWSTPVL 564 (1510)
Q Consensus 489 ~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~----f~~~I~~~R~~El~~l~~~~~~~a~~~~~~~~~p~~ 564 (1510)
...-.++|+++..+-.+--..-.+.|-|..++|.|+-|+. +.+.|.+.-++|-+.+.....+......++... +
T Consensus 380 TeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lg--l 457 (790)
T KOG0056|consen 380 TEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLG--L 457 (790)
T ss_pred ehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhH--H
Confidence 5555666666544333333344567778999999998865 555566666677666555544444333222211 1
Q ss_pred HHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccccCCCCCCcc
Q 000438 565 ISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIA 644 (1510)
Q Consensus 565 v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~ 644 (1510)
....-+.+|....+.+|.+...-.+++.-.|.+|++.+.....++....+-.+|+.+.|++++...+.....|-....+.
T Consensus 458 l~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~~~G~ 537 (790)
T KOG0056|consen 458 LAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKVTQGK 537 (790)
T ss_pred hhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccccCCe
Confidence 12223445555567899999888888899999999999999999999999999999999876543222111222234578
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TTA 711 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ia 711 (1510)
|+++|++|.|++ ++|+|+||||++++|+.+|+|||+|+||||+++.+.+.++..+|.|.++| .||
T Consensus 538 i~fsnvtF~Y~p--~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IG 615 (790)
T KOG0056|consen 538 IEFSNVTFAYDP--GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIG 615 (790)
T ss_pred EEEEEeEEecCC--CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcC
Confidence 999999999974 57999999999999999999999999999999999999999999999999 389
Q ss_pred EEcCCCcCCCccHHHHHhcCCCC--ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000438 712 YVAQTSWIQNGTIEENILFGLPM--NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1510)
Q Consensus 712 yv~Q~~~i~~~Tv~enI~fg~~~--~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~ 789 (1510)
.|||+.-+||.||..||.+|+|- |++-| ++.+|...++.+-.+|+|+.|.+||+|-.||||+||||++||++.++|.
T Consensus 616 VVPQDtvLFNdTI~yNIryak~~Asneevy-aAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~ 694 (790)
T KOG0056|consen 616 VVPQDTVLFNDTILYNIRYAKPSASNEEVY-AAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPS 694 (790)
T ss_pred cccCcceeecceeeeheeecCCCCChHHHH-HHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCc
Confidence 99999999999999999999884 44444 4567778888899999999999999999999999999999999999999
Q ss_pred EEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhc-CcchHHHHHH
Q 000438 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS-GMDFGALVAA 868 (1510)
Q Consensus 790 i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~-~~~f~~l~~~ 868 (1510)
|++|||.|||||.++++.| +.++....+|+|-|+|.|+++.+-+||.|++++||+|+|.|+++|++.+ ++.|+++.+.
T Consensus 695 iIlLDEATSALDT~tER~I-QaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~ 773 (790)
T KOG0056|consen 695 IILLDEATSALDTNTERAI-QAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQA 773 (790)
T ss_pred EEEEcchhhhcCCccHHHH-HHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHH
Confidence 9999999999999999988 5677777889999999999999999999999999999999999999987 8899999865
Q ss_pred hh
Q 000438 869 HE 870 (1510)
Q Consensus 869 ~~ 870 (1510)
+.
T Consensus 774 qq 775 (790)
T KOG0056|consen 774 QQ 775 (790)
T ss_pred HH
Confidence 43
No 94
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-56 Score=529.95 Aligned_cols=442 Identities=23% Similarity=0.370 Sum_probs=337.2
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1510)
..++++|++++|+ +.++|+|+||++.+||++|++|.||+|||||+|.|.|.++|++|+|.++|+
T Consensus 7 ~ll~~~~i~K~Fg---gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~ 83 (500)
T COG1129 7 PLLELRGISKSFG---GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAA 83 (500)
T ss_pred ceeeeecceEEcC---CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhC
Confidence 4689999999996 458999999999999999999999999999999999999999999999994
Q ss_pred -EEEEcCCCcC-CCccHHHHHhcCCCCChh----hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHH
Q 000438 710 -TAYVAQTSWI-QNGTIEENILFGLPMNRA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1510)
Q Consensus 710 -iayv~Q~~~i-~~~Tv~enI~fg~~~~~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARa 783 (1510)
|+.|.|+.-+ ++.||.|||.+|.+.... .+++..+.+ .+.++.+.... .......+||+||||-|+||||
T Consensus 84 GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A--~~~l~~lg~~~--~~~~~v~~LsiaqrQ~VeIArA 159 (500)
T COG1129 84 GIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRA--RELLARLGLDI--DPDTLVGDLSIAQRQMVEIARA 159 (500)
T ss_pred CcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHH--HHHHHHcCCCC--ChhhhhhhCCHHHHHHHHHHHH
Confidence 7899999764 789999999998764321 111111111 12223232221 1556778899999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecCh-HHHHhcCcc
Q 000438 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRY-NALLNSGMD 861 (1510)
Q Consensus 784 l~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~-~~l~~~~~~ 861 (1510)
++.+++|+|||||||+|+.+..+++|+.+.+...+|.++|+|||+++++.. ||||.||+||+.+..++. .++
T Consensus 160 l~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~------ 233 (500)
T COG1129 160 LSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAET------ 233 (500)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCC------
Confidence 999999999999999999999999998877777789999999999999765 999999999998854321 000
Q ss_pred hHHHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHHHhcCcchHHHHHHH
Q 000438 862 FGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIY 941 (1510)
Q Consensus 862 f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y 941 (1510)
. . .+++
T Consensus 234 --------------------------------~------~------------------~~lv------------------ 239 (500)
T COG1129 234 --------------------------------S------E------------------DELV------------------ 239 (500)
T ss_pred --------------------------------C------H------------------HHHH------------------
Confidence 0 0 0000
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 942 CTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQI 1021 (1510)
Q Consensus 942 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~ 1021 (1510)
+...
T Consensus 240 -~~Mv--------------------------------------------------------------------------- 243 (500)
T COG1129 240 -RLMV--------------------------------------------------------------------------- 243 (500)
T ss_pred -HHhh---------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Q 000438 1022 FFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANY 1101 (1510)
Q Consensus 1022 l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~ 1101 (1510)
|
T Consensus 244 ----------------------G--------------------------------------------------------- 244 (500)
T COG1129 244 ----------------------G--------------------------------------------------------- 244 (500)
T ss_pred ----------------------C---------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHH
Q 000438 1102 WYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLG 1181 (1510)
Q Consensus 1102 ~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~ 1181 (1510)
T Consensus 245 -------------------------------------------------------------------------------- 244 (500)
T COG1129 245 -------------------------------------------------------------------------------- 244 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCC
Q 000438 1182 SFTFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPN 1261 (1510)
Q Consensus 1182 ~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~ 1261 (1510)
| +..+..++ + .++
T Consensus 245 --------------------------------------------------------r--~~~~~~~~-~------~~~-- 257 (500)
T COG1129 245 --------------------------------------------------------R--ELEDLFPE-P------PEE-- 257 (500)
T ss_pred --------------------------------------------------------c--chhhhccc-c------ccc--
Confidence 0 00000000 0 000
Q ss_pred CCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHH-H
Q 000438 1262 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH-D 1340 (1510)
Q Consensus 1262 wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~-~ 1340 (1510)
-+..-.++++|++.. ..++|+||++++||.+||.|--|||+|-++++|||.-++.+|+|.+||.++.--+++ .
T Consensus 258 ~~~~~~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~A 331 (500)
T COG1129 258 GIGEPVLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRDA 331 (500)
T ss_pred CCCCcEEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHHH
Confidence 001124567776643 158999999999999999999999999999999999999999999999988877766 5
Q ss_pred hhcceEEecCccc---cC-cccHHHhcCCC--CCCCHH-HHHHHHHHcCchHHHHhCc---CCccccccCCCCCCChhHH
Q 000438 1341 LRSRFGIIPQEPV---LF-EGTVRSNIDPI--GQYSDE-EIWKSLERCQLKDVVAAKP---DKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1341 LR~~i~iIpQdp~---LF-~gTIR~NLdp~--~~~sd~-eI~~aL~~~~L~~~i~~lp---~gLdt~v~e~G~nLS~GQr 1410 (1510)
.+..|+|||-|-- +| .-+|++|+..- ..++.. -+...-++.-..++++.+. ...+.+++ +||||.+
T Consensus 332 i~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v~----~LSGGNQ 407 (500)
T COG1129 332 IKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPIG----TLSGGNQ 407 (500)
T ss_pred HHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchhh----cCCchhh
Confidence 7889999998763 44 56999999532 111100 1223333333444555442 34445554 7999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1483 (1510)
|+++|||+|..+|+||||||||.++|..+.+.|.+.|++.. +|.+||+|+-.++++.. ||||+||.+|+++..
T Consensus 408 QKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e 482 (500)
T COG1129 408 QKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGE 482 (500)
T ss_pred hhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEE
Confidence 99999999999999999999999999999999999999876 57999999999999985 999999999999874
No 95
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1e-53 Score=542.19 Aligned_cols=507 Identities=17% Similarity=0.156 Sum_probs=369.5
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 322 LLR-CFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKLGMLI 400 (1510)
Q Consensus 322 l~~-~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~g~ri 400 (1510)
+++ .+|+.++.+.++.++..++..+.|.+++.+++...... . ....+.+++++ +..++..-..+...+.+.++
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~--~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 84 (555)
T TIGR01194 11 LLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFLG--Q-GSLFSFGGLCL---LALLFRIGADIFPAYAGMHI 84 (555)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--c-hHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH
Confidence 556 67888888889999999999999999998875321110 0 11111112222 22333334445566788888
Q ss_pred HHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 401 RCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVITTVVGIIG 480 (1510)
Q Consensus 401 R~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~~~l 480 (1510)
...+...+|+|.++++.....++++|+++|.++.|++.+.+++..+..+....+.+++++++++..-...+++.++++++
T Consensus 85 ~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~ 164 (555)
T TIGR01194 85 IANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAITISAIII 164 (555)
T ss_pred HHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 89999999999999999888888999999999999999999876555555555545444444432222222222222233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHH--HHHHHHHH----HHHHHHHHHHHHHHHHHHH
Q 000438 481 VMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWED--HFNKRILS----FRESEFGWLTKFMYSISGN 554 (1510)
Q Consensus 481 ~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~--~f~~~I~~----~R~~El~~l~~~~~~~a~~ 554 (1510)
.+.+..+..++.++...+..+..++..+...|.++|++++|.++.|+ ...+++.+ .|+...+..+ .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 240 (555)
T TIGR01194 165 GTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEIL----IFIAA 240 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHH----HHHHH
Confidence 33334445556666677777788888899999999999999999854 33333332 2222222111 11111
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---hcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccc
Q 000438 555 IIVMWSTPVLISTLTFATALL---FGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNE 631 (1510)
Q Consensus 555 ~~~~~~~p~~v~~~tF~~~~l---~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~ 631 (1510)
..+....+. +.++.+++ ..+.++.+.+++.+.+...+..|+..+...+..+.++++|++||.++++.++.++.
T Consensus 241 ~~~~~~~~~----~~~~~~~~~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~ 316 (555)
T TIGR01194 241 ENFGQLLFF----LLIGCALFAAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEP 316 (555)
T ss_pred HHHHHHHHH----HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence 111111111 11111111 12478999999999999999999999999999999999999999999864221100
Q ss_pred c---cccc-----CCCCCCccEEEeeeEEEccCCC--CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCC
Q 000438 632 S---VERV-----EGCDDNIAVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKIS 701 (1510)
Q Consensus 632 ~---~~~~-----~~~~~~~~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~ 701 (1510)
. .+.. +.......|+++|++|+|++.+ .+++|+|+||++++||+++|+||||||||||+++|+|+++|++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~ 396 (555)
T TIGR01194 317 ELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQE 396 (555)
T ss_pred cccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCC
Confidence 0 0000 1011235699999999997532 2369999999999999999999999999999999999999999
Q ss_pred cEEEECCe-------------EEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCC
Q 000438 702 GKVKVCGT-------------TAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGI 768 (1510)
Q Consensus 702 G~i~~~g~-------------iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~ 768 (1510)
|+|.++|. ++||+|+++++++|+++|+ ....+++..+++++.+++.+++..+|.|++|. .
T Consensus 397 G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~ 469 (555)
T TIGR01194 397 GEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----T 469 (555)
T ss_pred cEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc-----c
Confidence 99999883 6999999999999999995 22334556677888889999999999999873 7
Q ss_pred ccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhh-cCCcEEEEEccCCCccccCCEEEEEeCCEEE
Q 000438 769 NLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGA-LKGKTIILVTHQVDFLHNVDLILVMREGMIV 847 (1510)
Q Consensus 769 ~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~ 847 (1510)
+||||||||++||||++++|+++|||||||+||+++++++.+.+++.. .+++|+|+|||+++.+..||+|++|++|+++
T Consensus 470 ~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~ 549 (555)
T TIGR01194 470 ALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIV 549 (555)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEE
Confidence 899999999999999999999999999999999999999987766433 4689999999999999899999999999998
Q ss_pred Ee
Q 000438 848 QS 849 (1510)
Q Consensus 848 ~~ 849 (1510)
+.
T Consensus 550 ~~ 551 (555)
T TIGR01194 550 KD 551 (555)
T ss_pred Ee
Confidence 64
No 96
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.1e-53 Score=551.15 Aligned_cols=487 Identities=20% Similarity=0.258 Sum_probs=369.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHH
Q 000438 998 VLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLG 1077 (1510)
Q Consensus 998 ~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~ 1077 (1510)
++..++.--..+...+.|.+.-..+-..++++.+|..-.--...+.|+|+|-++.|.+.+++..++.-.... .-++++.
T Consensus 253 ~l~~l~~~~~~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~-~Plqi~~ 331 (1381)
T KOG0054|consen 253 LLQSLLLHQYFFVSFRVGMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWS-APLQIIL 331 (1381)
T ss_pred HHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 333333333445556778888888888889999999888777889999999999999999988765433332 2333333
Q ss_pred HHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHH
Q 000438 1078 IFIITC-QYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRV 1156 (1510)
Q Consensus 1078 ~~~v~~-~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~ 1156 (1510)
.+.++. ...|. .++.+.++++++-++.+..+..+..++.....+-.-....+|.++|+++||.|+||+.|.++-.+.-
T Consensus 332 ~l~lLy~~LG~s-a~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R 410 (1381)
T KOG0054|consen 332 ALYLLYGLLGPS-ALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLR 410 (1381)
T ss_pred HHHHHHHHhChH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHH
Confidence 333222 12221 2222223333344444444444444444445555566788999999999999999999988766654
Q ss_pred HHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHH-hccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000438 1157 NGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMIL-LPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVS 1235 (1510)
Q Consensus 1157 d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~-~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~s 1235 (1510)
++-.+.............+...... .++.++.+.... ...+.++|..+-.++++.-.+..++..+-.....+-+..+|
T Consensus 411 ~~El~~lrk~~~~~~~~~~~~~~~p-~lv~~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS 489 (1381)
T KOG0054|consen 411 QKELKLLRKSAYLSALNSFLNFFSP-VLVSVVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVS 489 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433333222222222222221111 222222222222 33556777777778887777777777777777778888999
Q ss_pred HHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHH
Q 000438 1236 VERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQV 1314 (1510)
Q Consensus 1236 veRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~ 1314 (1510)
++|+.+|...++-.+...+. .+.-+.+-.|+++|.++++.++ .++.|+||||+|++||.+||||++|||||||+++
T Consensus 490 ~~Ri~~fl~~~e~~~~~~~~---~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~A 566 (1381)
T KOG0054|consen 490 LKRLKEFLLSEELDPDSVER---SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSA 566 (1381)
T ss_pred HHHHHHHhcCcccCcccccc---CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHH
Confidence 99999999765443322111 1112344579999999999864 4459999999999999999999999999999999
Q ss_pred HhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCc
Q 000438 1315 FFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKL 1394 (1510)
Q Consensus 1315 L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gL 1394 (1510)
|+|-.+..+|++.++|. ++|+||.|.+|+|||||||-...+++++.-.++++.|+|++.++.+|.|=
T Consensus 567 iLGEm~~~sG~v~v~gs-------------iaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD 633 (1381)
T KOG0054|consen 567 ILGEMPKLSGSVAVNGS-------------VAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGD 633 (1381)
T ss_pred HhcCcccccceEEEcCe-------------EEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCC
Confidence 99999999999999984 99999999999999999999888899999999999999999999999999
Q ss_pred cccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHH-HHHHHHHcCCceEEEEecChhhhhhcCEEE
Q 000438 1395 DSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI-QRIIREEFAACTIISIAHRIPTVMDCDRVI 1473 (1510)
Q Consensus 1395 dt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~I-q~~I~~~f~~~TvI~IAHRl~ti~~~DrIl 1473 (1510)
.|.|||+|.||||||||||+||||++++++|.+||.|-|+||.++.+.| .+.|+...+++|+|.+||.++.+.+||+|+
T Consensus 634 ~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Ii 713 (1381)
T KOG0054|consen 634 LTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQII 713 (1381)
T ss_pred cceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEE
Confidence 9999999999999999999999999999999999999999999998765 677877889999999999999999999999
Q ss_pred EEeCCEEEEecChhHHhcCCcHHHHHHHHH
Q 000438 1474 VVDAGWAKEFGKPSRLLERPSLFGALVQEY 1503 (1510)
Q Consensus 1474 VL~~G~ivE~gsp~~Ll~~~~~f~~lv~~~ 1503 (1510)
||++|+|+|.|+|+||++..+.|.++..+.
T Consensus 714 vl~~G~I~~~Gty~el~~~~~~~~~l~~~~ 743 (1381)
T KOG0054|consen 714 VLKDGKIVESGTYEELLKSGGDFAELAHEE 743 (1381)
T ss_pred EecCCeEecccCHHHHHhcchhHHHHhhcc
Confidence 999999999999999998888888885543
No 97
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4.6e-52 Score=572.35 Aligned_cols=473 Identities=17% Similarity=0.181 Sum_probs=359.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 393 SQKLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML-QLHAVWLMPLQISVALILLYNCLGASV 471 (1510)
Q Consensus 393 ~~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~-~~~~~w~~plqi~lal~lL~~~lG~s~ 471 (1510)
..+.+.+.-..+...++++.++.+.....+...|+|+|.++.|++.+.+.+. .+..+....+.+++++++++..-++.+
T Consensus 949 ~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~ 1028 (1490)
T TIGR01271 949 LVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIF 1028 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666666777788899999998888889999999999999999998765 345555555566666655544433333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 472 ITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSI 551 (1510)
Q Consensus 472 l~gl~~~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~ 551 (1510)
++.+.++++.+.+..+..+..+..++.....+.......+|.++|+.+||.|+||+.|.++..+.-+...+.........
T Consensus 1029 l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1108 (1490)
T TIGR01271 1029 IAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTL 1108 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32233333333344444555566666667777888899999999999999999999998887665443221111111100
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcc
Q 000438 552 SGNIIVMWS-TPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVN 630 (1510)
Q Consensus 552 a~~~~~~~~-~p~~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~ 630 (1510)
....+.... .-.++..+++.. +.....+++.+-.++++...+..++..+...+..+..+++|.+||.+|++.++..+
T Consensus 1109 ~wl~~~~~~i~~~~~~~~~~l~--~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~ 1186 (1490)
T TIGR01271 1109 RWFQMRIDIIFVFFFIAVTFIA--IGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEP 1186 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 000000000 001111111111 11123455666666666777788888888889999999999999999997653321
Q ss_pred cccc--------------c--cC-CCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHH
Q 000438 631 ESVE--------------R--VE-GCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASI 693 (1510)
Q Consensus 631 ~~~~--------------~--~~-~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~l 693 (1510)
...+ . .+ .-+..+.|+++|++|+|+++ .+++|+|+||+|++||++||||++|||||||+++|
T Consensus 1187 ~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL 1265 (1490)
T TIGR01271 1187 RPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSAL 1265 (1490)
T ss_pred cccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 1000 0 00 00123579999999999753 46899999999999999999999999999999999
Q ss_pred hcCcccCCcEEEECC-------------eEEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCc
Q 000438 694 LGEMHKISGKVKVCG-------------TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQ 760 (1510)
Q Consensus 694 lG~~~~~~G~i~~~g-------------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~ 760 (1510)
+|+++ .+|+|.++| +++|+||+|.+|++||||||....+++++...++++.|++.+.+..+|.|.+
T Consensus 1266 ~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLd 1344 (1490)
T TIGR01271 1266 LRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLD 1344 (1490)
T ss_pred hhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccc
Confidence 99997 899999998 3799999999999999999986666777888899999999999999999999
Q ss_pred ccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEE
Q 000438 761 TEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILV 840 (1510)
Q Consensus 761 t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~ 840 (1510)
|.+|++|.+||||||||++||||++++|+|+|||||||+||+++.+.|.+. ++...+++|+|+|||+++.+..+|+|++
T Consensus 1345 t~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~-L~~~~~~~TvI~IaHRl~ti~~~DrIlv 1423 (1490)
T TIGR01271 1345 FVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKT-LKQSFSNCTVILSEHRVEALLECQQFLV 1423 (1490)
T ss_pred cccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHH-HHHHcCCCEEEEEecCHHHHHhCCEEEE
Confidence 999999999999999999999999999999999999999999999888654 4555678999999999999999999999
Q ss_pred EeCCEEEEecChHHHHhcCcchHHHHHHhh
Q 000438 841 MREGMIVQSGRYNALLNSGMDFGALVAAHE 870 (1510)
Q Consensus 841 l~~G~i~~~g~~~~l~~~~~~f~~l~~~~~ 870 (1510)
|++|+|++.|+++++++.++.|.++++...
T Consensus 1424 L~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1424 IEGSSVKQYDSIQKLLNETSLFKQAMSAAD 1453 (1490)
T ss_pred EECCEEEEeCCHHHHHcCCcHHHHHHHHhC
Confidence 999999999999999988888998887544
No 98
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.4e-52 Score=484.69 Aligned_cols=527 Identities=21% Similarity=0.244 Sum_probs=423.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 317 PVRTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKL 396 (1510)
Q Consensus 317 ~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~ 396 (1510)
....+....+++.|+..+++..+-.++..+.|+.+-.+-|-+-...+ ...-..+.++....++++.+++.--.+...|+
T Consensus 12 ~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s-~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Ri 90 (580)
T COG4618 12 NLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRS-VPTLVMLTVLALGLYAFQGLLDAIRSRVLVRI 90 (580)
T ss_pred chhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666778888888888888888999999887666664433222 11234566666777788888888888999999
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 397 GMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMML------QLHAVWLMPLQISVALILLYNCLGAS 470 (1510)
Q Consensus 397 g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~------~~~~~w~~plqi~lal~lL~~~lG~s 470 (1510)
|.++-..|..-||.-+++.....+......+.. .|.+.+..|+. +|-..| +|+-+.++ |++.-.+|+-
T Consensus 91 g~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW-~P~yl~v~-fl~Hp~lG~~ 164 (580)
T COG4618 91 GERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPW-MPLYLAVI-FLFHPWLGLI 164 (580)
T ss_pred HHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCch-HHHHHHHH-HHHHHHHHHH
Confidence 999999999999999975554443322233443 47888877764 334445 57755544 4566689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 471 VITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYS 550 (1510)
Q Consensus 471 ~l~gl~~~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~ 550 (1510)
+++|.++++++..+|-..+++- -++-.+..-+|....+..++|..+|+.+|..+...++-.+....-+++..+....
T Consensus 165 a~~ga~iLv~la~ln~~~t~~p---~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~ 241 (580)
T COG4618 165 ALAGAIILVVLALLNERATRKP---LKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDR 241 (580)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9999999988888887765543 3444566777888999999999999999999988888887777777666655544
Q ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 000438 551 ISGNIIVMWSTPVLI--STLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSREL 628 (1510)
Q Consensus 551 ~a~~~~~~~~~p~~v--~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~ 628 (1510)
......+.-..-.+. .++..+.|..+++++|++.++..--+..-.-.|+...-....++..++.|.+|++++|.....
T Consensus 242 ~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~ 321 (580)
T COG4618 242 NGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPA 321 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 443333333333333 234556677778899999999987777777789999999999999999999999999986543
Q ss_pred ccccccccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC
Q 000438 629 VNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG 708 (1510)
Q Consensus 629 ~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g 708 (1510)
... +.+-+..+..+.++++++.-+ ..++++|+||||++++||-++|+||+|||||||.++|.|..+|.+|.|+++|
T Consensus 322 ~~~---~m~LP~P~g~L~Ve~l~~~PP-g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDg 397 (580)
T COG4618 322 AAE---RMPLPAPQGALSVERLTAAPP-GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDG 397 (580)
T ss_pred ccC---CCCCCCCCceeeEeeeeecCC-CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecc
Confidence 332 233334567899999999665 4567999999999999999999999999999999999999999999999998
Q ss_pred -------------eEEEEcCCCcCCCccHHHHHh-cCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHH
Q 000438 709 -------------TTAYVAQTSWIQNGTIEENIL-FGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQ 774 (1510)
Q Consensus 709 -------------~iayv~Q~~~i~~~Tv~enI~-fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 774 (1510)
+|||.||+--+|.|||.|||. |+.+.|.++.-+..+..+.++-+..+|+|++|.||+.|.+|||||
T Consensus 398 a~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQ 477 (580)
T COG4618 398 ADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQ 477 (580)
T ss_pred hhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchH
Confidence 589999999999999999996 666677766666666777888888999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHH
Q 000438 775 KQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNA 854 (1510)
Q Consensus 775 kqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~ 854 (1510)
||||+||||+|.||.+++||||-|+||.+.+..+.+.+.....+|.|+|+|||+++.+..+|+|++|+||++..-|+.+|
T Consensus 478 RQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~e 557 (580)
T COG4618 478 RQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREE 557 (580)
T ss_pred HHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHH
Confidence 99999999999999999999999999999999998777677778999999999999999999999999999999999999
Q ss_pred HHh
Q 000438 855 LLN 857 (1510)
Q Consensus 855 l~~ 857 (1510)
+++
T Consensus 558 VLa 560 (580)
T COG4618 558 VLA 560 (580)
T ss_pred HHH
Confidence 875
No 99
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=7.1e-52 Score=525.40 Aligned_cols=499 Identities=17% Similarity=0.194 Sum_probs=354.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 318 VRTTLLRCFWKEVAFTAFLAIVRLCVMYVG-PVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFVEVFSTHQFNFNSQKL 396 (1510)
Q Consensus 318 l~~al~~~~~~~~~~~~~~~l~~~~~~~~~-P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~l~~~~~~~~~~~~ 396 (1510)
+++.+++.+++.++...++.++..++..+. |++.+.+++.+.+ . ...-+.+++.+++..+ +.....+...++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~-~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 75 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADT-S--LLVLPEFLGLLLLLMA----VTLGSQLALTTL 75 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-c--chHHHHHHHHHHHHHH----HHHHHHHHHHHH
Confidence 566777888888888888888888888774 6777888876532 1 1111111111222211 222233444566
Q ss_pred HHHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 397 GMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVITTVV 476 (1510)
Q Consensus 397 g~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~ 476 (1510)
+.++...+...+|+|.++++.....++.+|+++|.++.|++.+..++..+..++...+.+++++++++..-+..+++.++
T Consensus 76 ~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~ 155 (547)
T PRK10522 76 GHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAI 155 (547)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 77777778888999999999988888999999999999999999876666777888787777777666543344444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhc--c----HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 477 GIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQA--W----EDHFNKRILSFRESEFGWLTKFMYS 550 (1510)
Q Consensus 477 ~~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~a--w----E~~f~~~I~~~R~~El~~l~~~~~~ 550 (1510)
++++.+.+...+.++..+..++.++..+++.+.++|.++|++++++.+ . ++.|.+...+.++...+..+ .
T Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 231 (547)
T PRK10522 156 WMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADT----F 231 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHH----H
Confidence 454555566677788888888999999999999999999999998533 2 33333333333333332211 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC-----ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000438 551 ISGNIIVMWSTPVLISTLTFATALLFGV-----PLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLS 625 (1510)
Q Consensus 551 ~a~~~~~~~~~p~~v~~~tF~~~~l~~~-----~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~ 625 (1510)
....... ..++..+.++.+.+.++ .++....+.. +...+..|+..+...+..+.+++++++|+.+++..
T Consensus 232 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~ 305 (547)
T PRK10522 232 HLSAVNW----SNIMMLGAIGLVFYMANSLGWADTNVAATYSL--TLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALA 305 (547)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHHhhcCChHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1111111 01111111222222221 2222222222 22336689999999999999999999999999865
Q ss_pred ccCccccccccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEE
Q 000438 626 RELVNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVK 705 (1510)
Q Consensus 626 ~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~ 705 (1510)
++.++.. +..+. +....++++|++|+|++ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.
T Consensus 306 ~~~~~~~-~~~~~-~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~ 381 (547)
T PRK10522 306 PYKAEFP-RPQAF-PDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEIL 381 (547)
T ss_pred ccccccc-ccccc-CcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEE
Confidence 4322111 11111 11246999999999973 34799999999999999999999999999999999999999999999
Q ss_pred ECC-------------eEEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccC---CCCc
Q 000438 706 VCG-------------TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGE---RGIN 769 (1510)
Q Consensus 706 ~~g-------------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~---~g~~ 769 (1510)
++| .++|++|++.++++|++|| +...+++..++.++.+++..++. .++ +|.+
T Consensus 382 ~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~G~~ 449 (547)
T PRK10522 382 LDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLE---------LEDGRISNLK 449 (547)
T ss_pred ECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhh---------ccccCCCCCC
Confidence 987 3799999999999999999 33344444444555544443332 233 3789
Q ss_pred cChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCEEEE
Q 000438 770 LSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREGMIVQ 848 (1510)
Q Consensus 770 LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~ 848 (1510)
||||||||++||||++++|+++|||||||+||+++++.+.+.+.+... +++|+|+|||+++.+..||+|++|++|++++
T Consensus 450 LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e 529 (547)
T PRK10522 450 LSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSE 529 (547)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999998876654433 5899999999999999999999999999987
Q ss_pred e
Q 000438 849 S 849 (1510)
Q Consensus 849 ~ 849 (1510)
.
T Consensus 530 ~ 530 (547)
T PRK10522 530 L 530 (547)
T ss_pred e
Confidence 5
No 100
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=6.3e-54 Score=498.72 Aligned_cols=450 Identities=24% Similarity=0.415 Sum_probs=346.3
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1510)
..++++++++.|+ +..+++||||+|++||++|++|+||+|||||+++|.|.++|++|+|.++|+
T Consensus 3 ~~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~ 79 (501)
T COG3845 3 PALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRL 79 (501)
T ss_pred ceEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHc
Confidence 4789999999997 467999999999999999999999999999999999999999999999994
Q ss_pred -EEEEcCCCcC-CCccHHHHHhcCCCCChh---hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHH
Q 000438 710 -TAYVAQTSWI-QNGTIEENILFGLPMNRA---KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1510)
Q Consensus 710 -iayv~Q~~~i-~~~Tv~enI~fg~~~~~~---~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal 784 (1510)
||+|.|++-+ .+.||.|||..|.+-... .++++.+. +++-.+ ..|..-...++..+||-||||||.|-+||
T Consensus 80 GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~--i~~l~~--~yGl~vdp~~~V~dLsVG~qQRVEIlKaL 155 (501)
T COG3845 80 GIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARAR--IKELSE--RYGLPVDPDAKVADLSVGEQQRVEILKAL 155 (501)
T ss_pred CCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHH--HHHHHH--HhCCCCCccceeecCCcchhHHHHHHHHH
Confidence 7999999765 678999999999864210 11111111 111111 23444445677889999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhcCcchH
Q 000438 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNSGMDFG 863 (1510)
Q Consensus 785 ~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~~~~f~ 863 (1510)
|++|+++|||||||.|-|...+++|+.+.+....|+|||+|||.++++.. ||++.||++|+++. +++..
T Consensus 156 yr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvg--t~~~~-------- 225 (501)
T COG3845 156 YRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVG--TVDPV-------- 225 (501)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEe--eecCC--------
Confidence 99999999999999999999999998887777889999999999999865 99999999999763 22100
Q ss_pred HHHHHhhhhhhhhhccccCCCCCCCCCCCCCCccccccccccCCccccccccccCCchhhhHHHHhcCcchHHHHHHHHH
Q 000438 864 ALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEEERETGKVGLHVYKIYCT 943 (1510)
Q Consensus 864 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~g~v~~~~y~~y~~ 943 (1510)
.+. . .+|-
T Consensus 226 ---------------------------~~~--------------------t---------~~el---------------- 233 (501)
T COG3845 226 ---------------------------AET--------------------T---------EEEL---------------- 233 (501)
T ss_pred ---------------------------CCC--------------------C---------HHHH----------------
Confidence 000 0 0000
Q ss_pred HhhhhHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 944 EAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNPSLFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFF 1023 (1510)
Q Consensus 944 ~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~ 1023 (1510)
+
T Consensus 234 -a------------------------------------------------------------------------------ 234 (501)
T COG3845 234 -A------------------------------------------------------------------------------ 234 (501)
T ss_pred -H------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 000438 1024 SQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWY 1103 (1510)
Q Consensus 1024 ~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~ 1103 (1510)
T Consensus 235 -------------------------------------------------------------------------------- 234 (501)
T COG3845 235 -------------------------------------------------------------------------------- 234 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHH
Q 000438 1104 RGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSF 1183 (1510)
Q Consensus 1104 ~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~ 1183 (1510)
++
T Consensus 235 ------------~l------------------------------------------------------------------ 236 (501)
T COG3845 235 ------------EL------------------------------------------------------------------ 236 (501)
T ss_pred ------------HH------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHhccCccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCC
Q 000438 1184 TFCLATLFMILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWP 1263 (1510)
Q Consensus 1184 ~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp 1263 (1510)
+ +.+. + ..+. . + ++.-|
T Consensus 237 --------M--vG~~-v-------------------------------------------~~~~------~--~-~~~~p 253 (501)
T COG3845 237 --------M--VGRE-V-------------------------------------------VLRV------V--K-PPSTP 253 (501)
T ss_pred --------h--cCCc-c-------------------------------------------cccc------c--c-CCCCC
Confidence 0 0000 0 0000 0 0 11113
Q ss_pred CCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeC-CCCCHHHhh
Q 000438 1264 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDI-SLLGLHDLR 1342 (1510)
Q Consensus 1264 ~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI-~~i~l~~LR 1342 (1510)
..-.++++|+++.-+.+. ..+++|||++++||++||.|-.|-|-+.|+.+|.|+..|.+|+|.++|.|+ ...+....|
T Consensus 254 g~~vL~V~~L~v~~~~~~-~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~r 332 (501)
T COG3845 254 GEVVLEVEDLSVKDRRGV-TAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRERR 332 (501)
T ss_pred CCeEEEEeeeEeecCCCC-ceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHHH
Confidence 334689999999765443 479999999999999999999999999999999999999999999999997 677888766
Q ss_pred c-ceEEecCccc----cCcccHHHhcCCCCC----------CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCh
Q 000438 1343 S-RFGIIPQEPV----LFEGTVRSNIDPIGQ----------YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSV 1407 (1510)
Q Consensus 1343 ~-~i~iIpQdp~----LF~gTIR~NLdp~~~----------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~ 1407 (1510)
+ .+++||.|.+ ..+-|+.||+-+... ..-.++.+..++. +.+| .-.+.+.++++ .+|||
T Consensus 333 ~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~l-i~~f-dVr~~~~~~~a----~~LSG 406 (501)
T COG3845 333 RLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFAREL-IEEF-DVRAPSPDAPA----RSLSG 406 (501)
T ss_pred hcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHH-HHHc-CccCCCCCcch----hhcCC
Confidence 5 5999999984 557799999843211 1223333322221 1111 11134445544 47999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecC
Q 000438 1408 GQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGK 1485 (1510)
Q Consensus 1408 GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gs 1485 (1510)
|+.|++-+||-|.++|++||..+||-+||..+.+.|++.|.+.. +|+.|+.|+-+|+++.. ||||.||.+|+++....
T Consensus 407 GNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~~ 486 (501)
T COG3845 407 GNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIVP 486 (501)
T ss_pred cceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceecccc
Confidence 99999999999999999999999999999999999999998875 57899999999999987 99999999999998887
Q ss_pred hhH
Q 000438 1486 PSR 1488 (1510)
Q Consensus 1486 p~~ 1488 (1510)
|++
T Consensus 487 ~~~ 489 (501)
T COG3845 487 PEE 489 (501)
T ss_pred ccc
Confidence 775
No 101
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.5e-54 Score=498.84 Aligned_cols=238 Identities=38% Similarity=0.722 Sum_probs=230.4
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
|.|+|+|++++|+++.+++|+|+||+|++||++||+|+||||||||+++|+|+++ .+|+|.|||.|+.+++.+++|+++
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 6799999999998666679999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000438 1346 GIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRL 1425 (1510)
Q Consensus 1346 ~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kI 1425 (1510)
+||||+|.+|++|+++|++|++..+++++|++++.++|.+++..+|++||+.++|+|.+||+|||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999999887889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHHHHHh
Q 000438 1426 LFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEYA 1504 (1510)
Q Consensus 1426 LiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~~~~ 1504 (1510)
|||||||++||+++++.+++.|++.+++||||+||||++++..||||+||++|+++|+|+|++|+++++.|++++++..
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhhcc
Confidence 9999999999999999999999998889999999999999999999999999999999999999998899999998776
No 102
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=8.9e-49 Score=503.52 Aligned_cols=504 Identities=15% Similarity=0.165 Sum_probs=370.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 329 EVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYY-LVLILLVAKFVEVFSTHQFNFNSQKLGMLIRCTLITS 407 (1510)
Q Consensus 329 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~-l~~~l~~~~~~~~l~~~~~~~~~~~~g~riR~~L~~~ 407 (1510)
.++...++.++.+.+....|++++.+++.+.+++. ..+. +...+++..++.+++..-..|...++..++|..+...
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~---~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~ 173 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSP---RNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRY 173 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677778888899999999999999998765432 1111 1111222233333444444555667777788877777
Q ss_pred HHHHHhcCCh----hhhccCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000438 408 LYRKGLRLSC----SARQAHGVGQIVNYMAVDAQQLSDMMLQ-LHAVWLMPLQISVALILLYNCLGASVITT-VVGIIGV 481 (1510)
Q Consensus 408 Iy~K~L~ls~----~~~~~~~~G~ivNlms~D~~ri~~~~~~-~~~~w~~plqi~lal~lL~~~lG~s~l~g-l~~~~l~ 481 (1510)
++++.+.--. ...++ .+|++.+.++.|++.+.+.+.. +..+...++.++.+++.|+..+++....+ ++.+++.
T Consensus 174 l~~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~ 252 (659)
T TIGR00954 174 LYSKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFAT 252 (659)
T ss_pred HHHHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 7777766321 11122 4799999999999999988754 45566667777778887887677654333 3444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 482 MIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISGNIIVMWST 561 (1510)
Q Consensus 482 ~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE~~f~~~I~~~R~~El~~l~~~~~~~a~~~~~~~~~ 561 (1510)
+.+...+.++..+..++..+..++-....+|.++|+++||.|+-|+.+.++..+.=++-.+..++.....+....+....
T Consensus 253 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 332 (659)
T TIGR00954 253 GVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIV 332 (659)
T ss_pred HHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 55667778888888888888888889999999999999999999998888876655554454444444443332222221
Q ss_pred H----HHHHHHHHHHHHHh--c---CccCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 000438 562 P----VLISTLTFATALLF--G---VPLDAGSVFTT----TTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSREL 628 (1510)
Q Consensus 562 p----~~v~~~tF~~~~l~--~---~~Lta~~vFt~----lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~ 628 (1510)
. ..+..+..+..++. | +.+|.+..+.. ..++..+..|+..+...+..+.++.++.+||.++++.++.
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~ 412 (659)
T TIGR00954 333 AKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDD 412 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 12222222222232 1 46887764442 3346677899999999999999999999999999975321
Q ss_pred cc------ccccc-----------------cCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCC
Q 000438 629 VN------ESVER-----------------VEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSG 685 (1510)
Q Consensus 629 ~~------~~~~~-----------------~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsG 685 (1510)
.. ..... .........|+++|++|+|++ ++++|+|+||++++||.++|+||||||
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl~i~~Ge~~~IvG~nGsG 490 (659)
T TIGR00954 413 VKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSFEVPSGNHLLICGPNGCG 490 (659)
T ss_pred HhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceEEECCCCEEEEECCCCCC
Confidence 10 00000 000012346999999999963 347999999999999999999999999
Q ss_pred hHHHHHHHhcCcccCCcEEEECC--eEEEEcCCCcCCCccHHHHHhcCCC--------CChhhHHHHHHHhchHHHHHhc
Q 000438 686 KSSLLASILGEMHKISGKVKVCG--TTAYVAQTSWIQNGTIEENILFGLP--------MNRAKYGEVVRVCCLEKDLEMM 755 (1510)
Q Consensus 686 KSTLl~~llG~~~~~~G~i~~~g--~iayv~Q~~~i~~~Tv~enI~fg~~--------~~~~~~~~v~~~~~l~~dl~~l 755 (1510)
||||+++|+|+++|++|+|.+++ +++||+|+|+++++|++|||.++.. ..++...+.++.+++.+.++.
T Consensus 491 KSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~- 569 (659)
T TIGR00954 491 KSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER- 569 (659)
T ss_pred HHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh-
Confidence 99999999999999999998865 6999999999999999999998742 234455667777888776666
Q ss_pred ccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccC
Q 000438 756 EYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNV 835 (1510)
Q Consensus 756 ~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~ 835 (1510)
+.|.+|..+ .+.+||||||||++||||++++|+++|||||||+||+++.+.+.+.+.+ .|+|+|+|||+++.++.|
T Consensus 570 ~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~---~~~tvI~isH~~~~~~~~ 645 (659)
T TIGR00954 570 EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCRE---FGITLFSVSHRKSLWKYH 645 (659)
T ss_pred cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHH---cCCEEEEEeCchHHHHhC
Confidence 888888765 5779999999999999999999999999999999999999988765433 389999999999999999
Q ss_pred CEEEEEeC
Q 000438 836 DLILVMRE 843 (1510)
Q Consensus 836 D~i~~l~~ 843 (1510)
|++++|++
T Consensus 646 d~il~l~~ 653 (659)
T TIGR00954 646 EYLLYMDG 653 (659)
T ss_pred CEEEEEeC
Confidence 99999973
No 103
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-50 Score=472.95 Aligned_cols=256 Identities=25% Similarity=0.442 Sum_probs=221.4
Q ss_pred HHhHHHHHHHHhhcCccccccccc------CC---CCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEE
Q 000438 1231 NRMVSVERIKQFTEIPSEAAWKME------DR---LPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVV 1301 (1510)
Q Consensus 1231 ~~~~sveRi~~~~~~~~E~~~~~~------~~---~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIV 1301 (1510)
+.+.+++|+.+|...+.|.....+ .. ..+..||..|.|+|+|++++|+.+.+++|+|+||+|++||++||+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~Iv 114 (329)
T PRK14257 35 QKLNKYQRAFAWLKLPKQKKAELKQFLNKKKTQVDLLKEDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFI 114 (329)
T ss_pred hccccccchhhHHhcccccchhhhhcccccccccccccCCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEE
Confidence 446677888888776655432111 10 113469999999999999999865567999999999999999999
Q ss_pred CCCCCCHHHHHHHHhcccC-----CCCcEEEEcCeeCC--CCCHHHhhcceEEecCccccCcccHHHhcC--C-CCCCCH
Q 000438 1302 GRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDIS--LLGLHDLRSRFGIIPQEPVLFEGTVRSNID--P-IGQYSD 1371 (1510)
Q Consensus 1302 GrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~--~i~l~~LR~~i~iIpQdp~LF~gTIR~NLd--p-~~~~sd 1371 (1510)
||||||||||+++|+|+++ |.+|+|.|||+|+. ++++.++|++++||||+|.+|++|+++||+ | +..+++
T Consensus 115 G~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~ 194 (329)
T PRK14257 115 GPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGIND 194 (329)
T ss_pred CCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCCh
Confidence 9999999999999999997 57999999999997 456788999999999999999999999998 3 334556
Q ss_pred HHH-----HHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHH
Q 000438 1372 EEI-----WKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRI 1446 (1510)
Q Consensus 1372 ~eI-----~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~ 1446 (1510)
++. .++++.++|. .++++.+++.|.+||||||||+|||||++++|+||||||||++||+++++.+++.
T Consensus 195 ~~~~~~~~~~~l~~~~L~-------~~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~ 267 (329)
T PRK14257 195 RKILEKIVEKSLKSAALW-------DEVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEEL 267 (329)
T ss_pred HHHHHHHHHHHHHHcCCc-------chhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 554 5566777764 3466788999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1447 IREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1447 I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
|++.++++|+|+||||++++.+ ||||+||++|+|+|.|+|++++.++
T Consensus 268 i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~~ 315 (329)
T PRK14257 268 ILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIHP 315 (329)
T ss_pred HHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCC
Confidence 9999889999999999999998 9999999999999999999999876
No 104
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.2e-47 Score=432.54 Aligned_cols=459 Identities=21% Similarity=0.278 Sum_probs=354.7
Q ss_pred HHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 403 TLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLH-AVWLMPLQISVALILLYNCLGASVITTVVGIIGV 481 (1510)
Q Consensus 403 ~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~~~-~~w~~plqi~lal~lL~~~lG~s~l~gl~~~~l~ 481 (1510)
.+....|++.+.||-....+..+|.+---|.--..-|+...+++- .+--..+++.+...++|...||...+..++++++
T Consensus 16 ~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~t~vtv~l 95 (497)
T COG5265 16 VLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALTTLVTVIL 95 (497)
T ss_pred HHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHHHHHHHHH
Confidence 445567888888887665555666655444444455666655432 3333457899999999999998776666655555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHhccHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Q 000438 482 MIFVVMGTKRNNRFQFNVMKNRDSRMK-ATNEMLNYMRVIKFQAWEDHFNKRILSFR----ESEFGWLTKFMYSISGNII 556 (1510)
Q Consensus 482 ~~~~~~~~~~~~~~q~~~m~~~D~Rv~-~~sEiL~~Ik~IKl~awE~~f~~~I~~~R----~~El~~l~~~~~~~a~~~~ 556 (1510)
..+-.+...--+.-.++.|+..|...+ .-.+.|-|-.++|.|+-|+.+.++-.+.. +.+++.......+......
T Consensus 96 Y~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~Ln~gQ~~ 175 (497)
T COG5265 96 YLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVLNFGQTA 175 (497)
T ss_pred HHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 444333333333334555777776654 44688999999999999988777764443 3344333333333222222
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccccccc
Q 000438 557 VMWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERV 636 (1510)
Q Consensus 557 ~~~~~p~~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~ 636 (1510)
++... +....+-+..-+..+.+|.+...-.-++...+..|++.+......+-|++...+++.+.+..+-...+...-.
T Consensus 176 I~~~~--l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d~pda~ 253 (497)
T COG5265 176 IFSTG--LRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSDAPDAP 253 (497)
T ss_pred HHHHH--HHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhccCCCCc
Confidence 22211 1112223333345678999999999999999999999999999999999999999999887653322221111
Q ss_pred CCC-CCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------
Q 000438 637 EGC-DDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------ 709 (1510)
Q Consensus 637 ~~~-~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------ 709 (1510)
+-. ...+.+.+++++|.|++ .+++|+++||++++|+.++++|++|+||||+++.+.+.+++.+|.|.++|+
T Consensus 254 ~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~qdir~vt 331 (497)
T COG5265 254 PLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQDIRDVT 331 (497)
T ss_pred cccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcchhHHHhH
Confidence 111 23467999999999974 578999999999999999999999999999999999999999999999994
Q ss_pred -------EEEEcCCCcCCCccHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHH
Q 000438 710 -------TAYVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1510)
Q Consensus 710 -------iayv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1510)
||.|||+.-++|.|+..||.+|.|. ..+......++.++...++.+|+|.+|.+||+|-.|||||||||++|
T Consensus 332 q~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggekqrvaia 411 (497)
T COG5265 332 QQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEKQRVAIA 411 (497)
T ss_pred HHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchHHHHHHH
Confidence 7999999999999999999999885 23344566778888899999999999999999999999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcc
Q 000438 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMD 861 (1510)
Q Consensus 782 Ral~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~ 861 (1510)
|++.++|+|++|||.|||||.|+++.|- ..++...+|+|.++|.|+++.+-.||.|+||++|+|+|.|+++|++..++.
T Consensus 412 r~ilk~p~il~~deatsaldt~te~~iq-~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ll~~~g~ 490 (497)
T COG5265 412 RTILKNPPILILDEATSALDTHTEQAIQ-AALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEELLAAGGL 490 (497)
T ss_pred HHHhcCCCEEEEehhhhHhhhhHHHHHH-HHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHHHHHcCCh
Confidence 9999999999999999999999999885 455666789999999999999999999999999999999999999999999
Q ss_pred hHHHH
Q 000438 862 FGALV 866 (1510)
Q Consensus 862 f~~l~ 866 (1510)
|+++.
T Consensus 491 ya~mw 495 (497)
T COG5265 491 YAEMW 495 (497)
T ss_pred HHHHh
Confidence 98875
No 105
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=8.8e-46 Score=430.66 Aligned_cols=193 Identities=21% Similarity=0.359 Sum_probs=163.1
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.|.++||+|+|.++. ..+++++|-|..+++|++|||+|+|||||++++.+.+.|..|.|.-.- ..+++
T Consensus 389 vi~~~nv~F~y~~~~-~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~-----------H~~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP-MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHS-----------HNKLP 456 (614)
T ss_pred eEEEeccccCCCCcc-hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccc-----------cccch
Confidence 599999999998765 799999999999999999999999999999999999999999885432 11233
Q ss_pred EecC---ccccCcccHHHhcCC-CC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHcc
Q 000438 1347 IIPQ---EPVLFEGTVRSNIDP-IG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1510)
Q Consensus 1347 iIpQ---dp~LF~gTIR~NLdp-~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1421 (1510)
..-| |-..++-|.-+|..| +. .-..+++...|.++||....+..| + ++||+|||.|+++||++++
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~p------~----~~LS~Gqr~rVlFa~l~~k 526 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVVP------M----SQLSDGQRRRVLFARLAVK 526 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccccc------h----hhcccccchhHHHHHHHhc
Confidence 3333 334566777778755 33 356688999999999986554444 3 3799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000438 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1422 ~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1483 (1510)
+|.||||||||++||.+|-..+.++|.+ .+.+||+|+|+...|.. +++|++.++|.+...
T Consensus 527 qP~lLlLDEPtnhLDi~tid~laeaiNe--~~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~ 587 (614)
T KOG0927|consen 527 QPHLLLLDEPTNHLDIETIDALAEAINE--FPGGVVLVSHDFRLISQVAEEIWVCENGTVTKW 587 (614)
T ss_pred CCcEEEecCCCcCCCchhHHHHHHHHhc--cCCceeeeechhhHHHHHHHHhHhhccCceeec
Confidence 9999999999999999999999999987 36799999999999988 999999999998765
No 106
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-45 Score=406.10 Aligned_cols=225 Identities=30% Similarity=0.516 Sum_probs=198.9
Q ss_pred EEEEEEEEEecCC---CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCC---HHHh
Q 000438 1268 VDLIDLQVRYRSN---TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG---LHDL 1341 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~---~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~---l~~L 1341 (1510)
|++++|+..|+.. ...+|+||||+|++||+.||+|+||||||||++++.|+-+|++|+|.+||.|+..++ ++.+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7999999999863 356999999999999999999999999999999999999999999999998888775 5667
Q ss_pred hcceEEecCccccCc-ccHHHhcC-CCC--CCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHH
Q 000438 1342 RSRFGIIPQEPVLFE-GTVRSNID-PIG--QYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1510)
Q Consensus 1342 R~~i~iIpQdp~LF~-gTIR~NLd-p~~--~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl 1413 (1510)
|++||+|+|++.|++ -|+.+|+. |.. ..+. +.+.+.|+.+||.|...+-|. +||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP~-----------qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYPA-----------QLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCch-----------hcCcchhhHH
Confidence 889999999999997 69999996 432 3444 446778999999988766663 6899999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1414 ~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
+|||||..+|+||+.|||||+|||+|.+.|.+.|++.- -|-||++|||.++.+++ ||||.||++|+|+|.|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999998754 37899999999999998 9999999999999999999999
Q ss_pred cCC--cHHHHHHHHH
Q 000438 1491 ERP--SLFGALVQEY 1503 (1510)
Q Consensus 1491 ~~~--~~f~~lv~~~ 1503 (1510)
.+| ..=.+++.+.
T Consensus 231 ~~Pk~~~t~~fi~~~ 245 (339)
T COG1135 231 ANPKHAITQEFIGET 245 (339)
T ss_pred cCcchHHHHHHHHhh
Confidence 988 4555555543
No 107
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-45 Score=386.23 Aligned_cols=214 Identities=31% Similarity=0.508 Sum_probs=193.4
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCC-CCHHHhhcce
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL-LGLHDLRSRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~-i~l~~LR~~i 1345 (1510)
-|+++|++.+|... .||||||++|++||++.|+||||||||||+++|.+|-+|++|+|.|||.++.. .++..+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 48999999999854 49999999999999999999999999999999999999999999999987743 3788999999
Q ss_pred EEecCccccCcc-cHHHhcCCCC----CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDPIG----QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~----~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
|+|+|...||.- |+.+|+.... ..+ .+.-.+.|+++||.+....-|. .|||||+||++||
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQRVAIA 148 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPA-----------QLSGGQQQRVAIA 148 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----------ccCcHHHHHHHHH
Confidence 999999999965 9999995221 222 3445678999999999888886 4699999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~-~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
|||.-+|+|+++|||||+||||.-..+.+++++..+ |.|.|+|||.+...++ +|||+.||+|+|+|.|+|+++..++
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999999999998764 6799999999999998 9999999999999999999999987
No 108
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.7e-44 Score=414.64 Aligned_cols=239 Identities=46% Similarity=0.797 Sum_probs=223.6
Q ss_pred CCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhc
Q 000438 1264 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRS 1343 (1510)
Q Consensus 1264 ~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~ 1343 (1510)
..|.|+++|++++|+.....+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 46789999999999754346999999999999999999999999999999999999999999999999999998889999
Q ss_pred ceEEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000438 1344 RFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1510)
Q Consensus 1344 ~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1423 (1510)
+++++||+|.+|++|+++|+++.....+++++++++.+++.+.+..+|.|+++.+++.+.+||+|||||++|||||+++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876545677889999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCC-cHHHHHHHH
Q 000438 1424 RLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERP-SLFGALVQE 1502 (1510)
Q Consensus 1424 kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~-~~f~~lv~~ 1502 (1510)
++|||||||++||+++.+.+.+.|++..+++|+|+++|+++.+..||||++|++|++++.|+++++.+.+ +.|+.++.+
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 255 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVRT 255 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHhc
Confidence 9999999999999999999999999876789999999999999999999999999999999999999876 788887653
No 109
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=8.3e-44 Score=404.62 Aligned_cols=234 Identities=35% Similarity=0.609 Sum_probs=217.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999988888888999999
Q ss_pred ecCccccCcccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 000438 1348 IPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLL 1426 (1510)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kIL 1426 (1510)
+||+|.+|+.|+++||.... ..+.+++.++++..++.+.+..+|.|+++.....+.+||||||||++|||||+++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999999999997533 34567788889999999999999999999988889999999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHHH
Q 000438 1427 FMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQ 1501 (1510)
Q Consensus 1427 iLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~ 1501 (1510)
||||||++||+.+.+.+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|++++++++.+.|+.+++
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~~ 235 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYLYQ 235 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHHHh
Confidence 999999999999999999999998778999999999999988999999999999999999999988888887764
No 110
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-44 Score=424.43 Aligned_cols=264 Identities=23% Similarity=0.327 Sum_probs=220.7
Q ss_pred cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccccCCCCCCccEEEeeeEEEccC
Q 000438 577 GVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNESVERVEGCDDNIAVEVRDGVFSWDD 656 (1510)
Q Consensus 577 ~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~f~~~~ 656 (1510)
.++++|+++|+++++|+.+..|+..+|..... .+|+++|+..+|.+...+... .+....|+++|++++|+.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~nls~~y~~ 92 (329)
T PRK14257 22 LNELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKED--FNHANVFEIRNFNFWYMN 92 (329)
T ss_pred cchhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccCC--CCcCceEEEEeeEEEecC
Confidence 35799999999999999999999988876543 579999998877543221111 123468999999999964
Q ss_pred CCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC---------------eEEEEcCC
Q 000438 657 ENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG---------------TTAYVAQT 716 (1510)
Q Consensus 657 ~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g---------------~iayv~Q~ 716 (1510)
..+++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++| .++||||+
T Consensus 93 -~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~ 171 (329)
T PRK14257 93 -RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQK 171 (329)
T ss_pred -CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecC
Confidence 23579999999999999999999999999999999999996 5799998754 48999999
Q ss_pred CcCCCccHHHHHhcCCCCC----hh----hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000438 717 SWIQNGTIEENILFGLPMN----RA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1510)
Q Consensus 717 ~~i~~~Tv~enI~fg~~~~----~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~ 788 (1510)
||++++|++|||.|+..++ ++ .+.+.++.|++..++ ++.+++++.+|||||||||+||||++++|
T Consensus 172 ~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l-------~~~~~~~~~~LSgGqkqRl~LARAl~~~p 244 (329)
T PRK14257 172 PTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEV-------KDDLDKAGNALSGGQQQRLCIARAIALEP 244 (329)
T ss_pred CccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchh-------hhhhhCCcccCCHHHHHHHHHHHHHHhCC
Confidence 9999999999999875322 22 245556666654443 35688999999999999999999999999
Q ss_pred CEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000438 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 789 ~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
+|+||||||++||+++.+++. ++++...+++|+|+|||+++++.. ||+|++|++|+|++.|+++++.+.
T Consensus 245 ~IlLLDEPts~LD~~~~~~i~-~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~ 314 (329)
T PRK14257 245 EVLLMDEPTSALDPIATAKIE-ELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIH 314 (329)
T ss_pred CEEEEeCCcccCCHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999865 566666678999999999999887 999999999999999999998753
No 111
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.5e-43 Score=396.45 Aligned_cols=221 Identities=58% Similarity=1.022 Sum_probs=209.9
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
|.++++|++++|+.....+|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 56899999999975444699999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000438 1346 GIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRL 1425 (1510)
Q Consensus 1346 ~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kI 1425 (1510)
+|+||+|.+|++|+++|++++...+++++.++++..++.+++..+|.|+++.+.+.+.+||+|||||++|||||+++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998777778899999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecCh
Q 000438 1426 LFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKP 1486 (1510)
Q Consensus 1426 LiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp 1486 (1510)
|+|||||++||+.+.+.+.+.|++..++.|+|+++|+++.+..||+|++|++|++++.|++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999987778899999999999999999999999999998864
No 112
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-43 Score=371.28 Aligned_cols=219 Identities=28% Similarity=0.432 Sum_probs=198.2
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCC-----cEEEEcCeeCCC--CCH
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSG-----GRIIIDGIDISL--LGL 1338 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~-----G~I~IDG~dI~~--i~l 1338 (1510)
..++++|+++-|.. ..+|+|||++|++++.+|++|||||||||++++|.|+.+..+ |+|.+||.||-+ ++.
T Consensus 6 ~~~~~~~l~~yYg~--~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGD--KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECc--hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 46899999999974 459999999999999999999999999999999999999876 999999999987 478
Q ss_pred HHhhcceEEecCccccCcccHHHhcCCCC---C----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1339 HDLRSRFGIIPQEPVLFEGTVRSNIDPIG---Q----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
-.||+++|+|.|.|.-|..||+||+.... . .-|+-+.++|+++.|||.+.. .| .+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD---rL----~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD---RL----HKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH---Hh----hCCccCCChhHHH
Confidence 89999999999999999999999997431 1 124567889999999998864 33 3456679999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
||||||||.-+|+||+||||||+||+.+...|.+.|.+..++-||++|||.+.-... +|+...+-.|+++|+|.-+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999889999999999998766 9999999999999999999999
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
.+|
T Consensus 237 ~~P 239 (253)
T COG1117 237 TNP 239 (253)
T ss_pred cCc
Confidence 887
No 113
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-43 Score=375.46 Aligned_cols=216 Identities=31% Similarity=0.503 Sum_probs=195.9
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+|+||+++|.+ ..+++|+||+|++||.+.++|+|||||||+++++.|+++|++|+|+|||.||++++...||++|||
T Consensus 2 I~~~nvsk~y~~--~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGN--KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCC--ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 799999999983 459999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCccccCcc-cHHHhcCCCC---CCC----HHHHHHHHHHcCch--HHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1348 IPQEPVLFEG-TVRSNIDPIG---QYS----DEEIWKSLERCQLK--DVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~~---~~s----d~eI~~aL~~~~L~--~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
|-|..-||.- ||.+||..-. ..+ ++++.+.|+.++|. ++..+.|. .|||||+||+.+||
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~-----------eLSGGQQQRVGv~R 148 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPH-----------ELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCch-----------hcCcchhhHHHHHH
Confidence 9999999955 9999996321 223 45678899999996 47777775 47999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC-
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP- 1493 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~- 1493 (1510)
||..+|+||+||||.++||+-|...+|+-+.+.-+ ++|+|.|||++++... +|||.||++|+++.+|+|++++++|
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pa 228 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPA 228 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCcc
Confidence 99999999999999999999999999999887543 7899999999998765 9999999999999999999999998
Q ss_pred cHH
Q 000438 1494 SLF 1496 (1510)
Q Consensus 1494 ~~f 1496 (1510)
..|
T Consensus 229 n~F 231 (309)
T COG1125 229 NDF 231 (309)
T ss_pred HHH
Confidence 555
No 114
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-43 Score=370.47 Aligned_cols=209 Identities=29% Similarity=0.411 Sum_probs=173.3
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1510)
.|+++|++++|+ +..+|+|||++|++||.++|+||+||||||||++|.|+.++++|+|.++|.
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 489999999996 357999999999999999999999999999999999999999999999992
Q ss_pred EEEEcCCCcCC-CccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000438 710 TAYVAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1510)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~ 788 (1510)
+|+|+|+..+| ..||.|||..+.-.-..+-++..+..+ .+-++.....| .....+.+|||||||||||||||+.+|
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A-~~lL~~VGL~~--ka~~yP~qLSGGQqQRVAIARALaM~P 155 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKA-LELLEKVGLAD--KADAYPAQLSGGQQQRVAIARALAMDP 155 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHH-HHHHHHcCchh--hhhhCccccCcHHHHHHHHHHHHcCCC
Confidence 68999998776 689999999873211111111111111 11223332222 345678899999999999999999999
Q ss_pred CEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000438 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 789 ~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
+++|+|||||||||+...++.+........|.|.|+|||++.|... ||||+.|++|+|+++|+++++..+
T Consensus 156 ~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 156 KVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred CEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 9999999999999999999988777777889999999999999987 899999999999999999998764
No 115
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-42 Score=391.91 Aligned_cols=232 Identities=32% Similarity=0.556 Sum_probs=214.0
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++|++++|+....++++|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999997543359999999999999999999999999999999999999999999999999988888888999999
Q ss_pred ecCccccCcccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 000438 1348 IPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLL 1426 (1510)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kIL 1426 (1510)
+||+|.+|..|+++|+.... .++.+++.++++..++.+++..+|.|+++.+.....+||+|||||++|||||+++|++|
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999997542 34567788888999999999999999999998889999999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHH
Q 000438 1427 FMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGAL 1499 (1510)
Q Consensus 1427 iLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~l 1499 (1510)
||||||++||+.+...+.+.|++..++.|+|+++|+++.+..||+|++|++|++++.|+++++.++.+.|+.+
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~ 233 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGGVYAKL 233 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCcchhhh
Confidence 9999999999999999999999987889999999999999889999999999999999999998877766553
No 116
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-42 Score=388.59 Aligned_cols=233 Identities=34% Similarity=0.609 Sum_probs=215.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+.+ ..+|+|+||+|++||++||+|++|||||||+++|.|+.+|++|+|.+||.+++..+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999643 348999999999999999999999999999999999999999999999999999888889999999
Q ss_pred ecCccccCcccHHHhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 000438 1348 IPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLL 1426 (1510)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kIL 1426 (1510)
+||+|.+|++|+++|+... ...+++++.++++.+++.+.+..+|.|+++.+.....+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999743 245677888999999999999999999999999889999999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHHH
Q 000438 1427 FMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQ 1501 (1510)
Q Consensus 1427 iLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv~ 1501 (1510)
||||||++||+++...+.+.|++..++.|+|+++|+++.+..||++++|++|++++.|+++++.++.+.|+.++.
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~~~~~~ 234 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLYAEMWK 234 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHHHHHHh
Confidence 999999999999999999999987667899999999999988999999999999999999999887677776654
No 117
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.7e-42 Score=381.38 Aligned_cols=207 Identities=56% Similarity=0.961 Sum_probs=189.6
Q ss_pred CCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHh
Q 000438 1262 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL 1341 (1510)
Q Consensus 1262 wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L 1341 (1510)
||..+.++++|++++|+....++++|+||+|++||++||+|++|||||||+++|.|+++|.+|+|.+||.++.+.+...+
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 89999999999999997543469999999999999999999999999999999999999999999999999998888889
Q ss_pred hcceEEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHcc
Q 000438 1342 RSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1510)
Q Consensus 1342 R~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1421 (1510)
|++++|+||+|.+|++|+++|+..+...+++++.++++ +.+....||+|||||++||||+++
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999998665566666666554 223456899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecCh
Q 000438 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKP 1486 (1510)
Q Consensus 1422 ~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp 1486 (1510)
+|+||||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+|
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999998778999999999999988999999999999999875
No 118
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-42 Score=386.93 Aligned_cols=227 Identities=36% Similarity=0.629 Sum_probs=210.7
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
|.|+++|++++|+.+ .++++|+||+|++||++||+|++|||||||+++|.|+.+|.+|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 468999999999743 3599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEecCccccCcccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000438 1346 GIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1510)
Q Consensus 1346 ~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~k 1424 (1510)
+|+||+|.+|.+|+++|+.... ...++++.++++.+++.+++..+|.|+++.+.....+||+|||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999997543 345678888999999999999999999999988899999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1425 LLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1425 ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
+|||||||++||+.+.+.+.+.|++..+++|||+|+|+++.+..||+|++|++|++++.|++++++++.
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~~ 228 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAKK 228 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhhC
Confidence 999999999999999999999999876789999999999999889999999999999999998887654
No 119
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.4e-41 Score=386.72 Aligned_cols=233 Identities=33% Similarity=0.632 Sum_probs=212.9
Q ss_pred EEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1268 VDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
++++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+....|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4789999999753 245999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EecCccccCcccHHHhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000438 1347 IIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRL 1425 (1510)
Q Consensus 1347 iIpQdp~LF~gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kI 1425 (1510)
|+||+|.+|+.|+++|+... .....+++.+.++..++.+++..+|.|+++.+.....+||+|||||++|||||+++|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999753 23456778888999999999999999999999888899999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHHHH
Q 000438 1426 LFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALV 1500 (1510)
Q Consensus 1426 LiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~lv 1500 (1510)
|||||||++||+.+.+.+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|+++++.+..+..+.++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQKGVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcChhHHHHh
Confidence 999999999999999999999998767899999999999998899999999999999999999987766665554
No 120
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.3e-41 Score=390.70 Aligned_cols=194 Identities=22% Similarity=0.354 Sum_probs=169.0
Q ss_pred CCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhc
Q 000438 1264 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRS 1343 (1510)
Q Consensus 1264 ~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~ 1343 (1510)
+...+++.+|+|.|.|+.++.++++++.++.-+++++||++|+||||+++++.+-.+|..|.+-+.+ |.
T Consensus 359 ~~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ 427 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RL 427 (582)
T ss_pred CCCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cc
Confidence 3457999999999999887899999999999999999999999999999999999999999988875 78
Q ss_pred ceEEecCccccCcccHHHhcC-------CCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1344 RFGIIPQEPVLFEGTVRSNID-------PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1344 ~i~iIpQdp~LF~gTIR~NLd-------p~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
+|++-.|.-+=| ..-|.. -+...+++|+.+.|...||...+...+ + ..||||||-|+++|
T Consensus 428 ri~~f~Qhhvd~---l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~s--i--------~~LSGGQKsrvafA 494 (582)
T KOG0062|consen 428 RIKYFAQHHVDF---LDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQS--I--------ASLSGGQKSRVAFA 494 (582)
T ss_pred eecchhHhhhhH---HHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhcc--c--------cccCCcchhHHHHH
Confidence 899999988644 233331 123348999999999999987766543 1 35899999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1483 (1510)
-....+|.+|||||||..||.++-..+-++|+. | +.-||+|+|+.+.|.. |+.++|.++|+|.-+
T Consensus 495 ~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~-F-~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~i 560 (582)
T KOG0062|consen 495 ACTWNNPHLLVLDEPTNHLDRDSLGALAKALKN-F-NGGVVLVSHDEEFISSLCKELWVVEDGKVTPI 560 (582)
T ss_pred HHhcCCCcEEEecCCCccccHHHHHHHHHHHHh-c-CCcEEEEECcHHHHhhcCceeEEEcCCcEEee
Confidence 999999999999999999999999999999986 4 4579999999999988 999999999999864
No 121
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.4e-41 Score=401.63 Aligned_cols=215 Identities=30% Similarity=0.473 Sum_probs=191.1
Q ss_pred EEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH---hh
Q 000438 1268 VDLIDLQVRYRSN--TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---LR 1342 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~--~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR 1342 (1510)
|+++|++++|+.+ ...+|+|+||+|++||.+||+|+||||||||+++|.|+.+|++|+|.+||.|+..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999642 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cceEEecCccccCc-ccHHHhcCC-C--CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1343 SRFGIIPQEPVLFE-GTVRSNIDP-I--GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1343 ~~i~iIpQdp~LF~-gTIR~NLdp-~--~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
++|++|||++.+|. .|+++|+.. . ...+ ++++.++|+.++|.+.....| ..||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----------SNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999995 699999962 1 1223 345778999999987665544 368999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
|||||+.+|+||+||||||+||++|...|.+.|++..+ +.|||+|||+++.+.. ||||++|++|+++|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998754 7899999999999977 99999999999999999999987
Q ss_pred CC
Q 000438 1492 RP 1493 (1510)
Q Consensus 1492 ~~ 1493 (1510)
++
T Consensus 231 ~p 232 (343)
T TIGR02314 231 HP 232 (343)
T ss_pred CC
Confidence 75
No 122
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.5e-41 Score=377.87 Aligned_cols=219 Identities=34% Similarity=0.587 Sum_probs=201.6
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
|.++++|++++|+....++++|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999975334599999999999999999999999999999999999999999999999999888877888999
Q ss_pred EEecCccccCcccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000438 1346 GIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1510)
Q Consensus 1346 ~iIpQdp~LF~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~k 1424 (1510)
+++||+|.+|..|+++|+.... ..+++++.++++..++.+.....|.|+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999899999997432 345667889999999999999999999999998889999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEec
Q 000438 1425 LLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1425 ILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~g 1484 (1510)
+|||||||++||.++...+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999876668999999999988779999999999998765
No 123
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-41 Score=397.04 Aligned_cols=221 Identities=25% Similarity=0.353 Sum_probs=186.7
Q ss_pred CCceEEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCC----
Q 000438 1264 AHGNVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLL---- 1336 (1510)
Q Consensus 1264 ~~g~I~f~~vs~~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i---- 1336 (1510)
....|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 334699999999997432 3599999999999999999999999999999999999999999999999998753
Q ss_pred ------------CHHHhhcceEEecCcc--ccCcccHHHhcCCCC---CCCHHH----HHHHHHHcCchHHHHhCcCCcc
Q 000438 1337 ------------GLHDLRSRFGIIPQEP--VLFEGTVRSNIDPIG---QYSDEE----IWKSLERCQLKDVVAAKPDKLD 1395 (1510)
Q Consensus 1337 ------------~l~~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sd~e----I~~aL~~~~L~~~i~~lp~gLd 1395 (1510)
....+|++++++||+| .+|++|+++|+.... ..++++ +.++++.+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------- 167 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD---------- 167 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh----------
Confidence 3567899999999998 689999999995321 233333 344555555531
Q ss_pred ccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhh-hcCEEE
Q 000438 1396 SLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVM-DCDRVI 1473 (1510)
Q Consensus 1396 t~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~-~~DrIl 1473 (1510)
......+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||+
T Consensus 168 ~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~ 247 (320)
T PRK13631 168 SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVI 247 (320)
T ss_pred hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEE
Confidence 22344567899999999999999999999999999999999999999999998753 5789999999999885 599999
Q ss_pred EEeCCEEEEecChhHHhcCCc
Q 000438 1474 VVDAGWAKEFGKPSRLLERPS 1494 (1510)
Q Consensus 1474 VL~~G~ivE~gsp~~Ll~~~~ 1494 (1510)
+|++|++++.|+|+++++++.
T Consensus 248 vl~~G~i~~~g~~~~~~~~~~ 268 (320)
T PRK13631 248 VMDKGKILKTGTPYEIFTDQH 268 (320)
T ss_pred EEECCEEEEeCCHHHHhcCHH
Confidence 999999999999998876543
No 124
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.2e-40 Score=420.60 Aligned_cols=199 Identities=27% Similarity=0.390 Sum_probs=167.0
Q ss_pred CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC--CCCcEEEEcCeeCCCCCHHHhhcceEEecCccc-cCc
Q 000438 1280 NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE--PSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPV-LFE 1356 (1510)
Q Consensus 1280 ~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e--p~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~-LF~ 1356 (1510)
+....|+|||=-++||.-.|++|.||||||||++.|.+-.. ..+|+|+|||.+..+ +..++++|||.|++. +-+
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 44568999999999999999999999999999999997653 357999999998765 778999999999885 556
Q ss_pred ccHHHhcCC---C---CCCCHHH----HHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCC-CE
Q 000438 1357 GTVRSNIDP---I---GQYSDEE----IWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS-RL 1425 (1510)
Q Consensus 1357 gTIR~NLdp---~---~~~sd~e----I~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~-kI 1425 (1510)
-||||-|.. . .+.+++| +.++.+..+|.+.- |..||.-|+.||++||.||.||=-|+.|| -|
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-------daiVG~~G~GLs~eQRKrLTIgVELvA~P~~i 951 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-------DALVGLPGSGLSTEQRKRLTIGVELVANPSSI 951 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-------hhhccCCCCCCCHHHhceeeEEEEEecCCcee
Confidence 699999942 1 2344443 55666666666543 56688888999999999999999999999 89
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhh--hhcCEEEEEeC-CEEEEecChhH
Q 000438 1426 LFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTV--MDCDRVIVVDA-GWAKEFGKPSR 1488 (1510)
Q Consensus 1426 LiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti--~~~DrIlVL~~-G~ivE~gsp~~ 1488 (1510)
|.||||||+||+++...|.+++|+.. .|+||++.-|.++.. +.+||++.|++ |+.|-+|++.+
T Consensus 952 lFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 952 LFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 99999999999999999999999865 689999999999753 45999999975 79999988643
No 125
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-41 Score=362.76 Aligned_cols=224 Identities=29% Similarity=0.480 Sum_probs=190.4
Q ss_pred eEEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCC-HHHhhc
Q 000438 1267 NVDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG-LHDLRS 1343 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~-l~~LR~ 1343 (1510)
.++++|+++.|+.+. .++|+||||+|.+||.+||||+||||||||.++|.|+.+|++|+|.+||.+..... -+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999998653 24999999999999999999999999999999999999999999999997765443 335788
Q ss_pred ceEEecCccc--cC-cccHHHhcC-CCCC----CCHHHHHHHHHHcCchH-HHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1344 RFGIIPQEPV--LF-EGTVRSNID-PIGQ----YSDEEIWKSLERCQLKD-VVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1344 ~i~iIpQdp~--LF-~gTIR~NLd-p~~~----~sd~eI~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
.+.+|+|||. |= .-||++-|. |... -..++++++|+.+||.+ +..+.|. .||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P~-----------eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRPH-----------ELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCch-----------hcChhHHHHHH
Confidence 8999999995 22 337777663 4332 23566999999999976 4455564 47999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCc--eEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAAC--TIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~--TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
|||||.-+||+||||||||+||.-..+.|.+.+.+..++. |.|+|+|++..+.. ||||+||++|+++|.++-++++.
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 9999999999999999999999999999999999876654 99999999999998 99999999999999999999998
Q ss_pred CC-cHHHHHHH
Q 000438 1492 RP-SLFGALVQ 1501 (1510)
Q Consensus 1492 ~~-~~f~~lv~ 1501 (1510)
.+ ..|.+..-
T Consensus 232 ~~~h~ytr~Ll 242 (252)
T COG1124 232 HPSHPYTRELL 242 (252)
T ss_pred CCccHHHHHHH
Confidence 85 45554433
No 126
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-41 Score=372.62 Aligned_cols=210 Identities=30% Similarity=0.466 Sum_probs=184.3
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.|+++|++++|..+ + ||+||||+|++||.+||+||||||||||+++++|++.|++|+|.++|.+++.... +.+||
T Consensus 4 ~i~v~nl~v~y~~~-~-vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR-P-VLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE-e-eeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 59999999999865 4 9999999999999999999999999999999999999999999999988765432 57899
Q ss_pred EecCcc---ccCcccHHHhcCCCC--------C---CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHH
Q 000438 1347 IIPQEP---VLFEGTVRSNIDPIG--------Q---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1510)
Q Consensus 1347 iIpQdp---~LF~gTIR~NLdp~~--------~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQr 1412 (1510)
||||.. .-|.-||+|-+.... . .+.+++.+||+++++.++..+ +++ .|||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-------~i~----~LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-------QIG----ELSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-------ccc----ccCcHHHHH
Confidence 999965 347889999885321 1 124889999999999987533 344 589999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1413 l~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~-~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
+.|||||+++|++|+|||||++||+.++..|.+.|++..+ +|||++|+|+++.+++ ||+|+.| ++++...|+|++.+
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~~ 226 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEVL 226 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhcc
Confidence 9999999999999999999999999999999999998765 8999999999999987 9999988 56788999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
..+
T Consensus 227 ~~~ 229 (254)
T COG1121 227 TEE 229 (254)
T ss_pred CHH
Confidence 754
No 127
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.6e-41 Score=380.47 Aligned_cols=211 Identities=33% Similarity=0.519 Sum_probs=186.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccc-----CCCCcEEEEcCeeCCCCC--HHH
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLV-----EPSGGRIIIDGIDISLLG--LHD 1340 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~-----ep~~G~I~IDG~dI~~i~--l~~ 1340 (1510)
|+++|++++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|++ +|.+|+|.+||.++.+.+ ...
T Consensus 1 i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGDK--HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 5789999999743 5999999999999999999999999999999999999 999999999999998876 667
Q ss_pred hhcceEEecCccccCcccHHHhcCCCC---C-C----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHH
Q 000438 1341 LRSRFGIIPQEPVLFEGTVRSNIDPIG---Q-Y----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1510)
Q Consensus 1341 LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQr 1412 (1510)
+|++++++||+|.+|..|+++|+.... . . .++++.++++.+++.+.....++ +.+||||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~qr 149 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQR 149 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHHH
Confidence 888999999999999889999996321 1 1 23567888999998776554421 35799999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000438 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1413 l~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
++|||||+++|++|||||||++||+++.+.+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 150 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 150 LCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999999999999999999999999999987656899999999999876 999999999999999998764
No 128
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.5e-41 Score=374.50 Aligned_cols=214 Identities=28% Similarity=0.490 Sum_probs=189.6
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.++++|++++|.. .++|+|+||+|++||.++|+||||||||||+++|.|+..|.+|+|++||.||.+++.+++.++++
T Consensus 2 ~L~~~~ls~~y~~--~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYGG--KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEECC--eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 4789999999983 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCccc-cCcccHHHhcC----C----CCCCC--HH-HHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1347 IIPQEPV-LFEGTVRSNID----P----IGQYS--DE-EIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1347 iIpQdp~-LF~gTIR~NLd----p----~~~~s--d~-eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
|+||++. -|.-||+|=+. | +...+ |+ .+.+||+.+++.++..+. + ..||||||||+.
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~---~--------~~LSGGerQrv~ 148 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP---V--------DELSGGERQRVL 148 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc---c--------cccChhHHHHHH
Confidence 9999975 45558888774 3 22223 33 578899999999886542 2 258999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhh-hcCEEEEEeCCEEEEecChhHHhc
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVM-DCDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
|||||.++|+||+|||||++||....-.|++.+++.. ++.|+|+|.|+++... .||++++|++|+++..|+|++.+.
T Consensus 149 iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 149 IARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred HHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 9999999999999999999999999999999999876 3699999999998765 599999999999999999999886
Q ss_pred CC
Q 000438 1492 RP 1493 (1510)
Q Consensus 1492 ~~ 1493 (1510)
.+
T Consensus 229 ~e 230 (258)
T COG1120 229 EE 230 (258)
T ss_pred HH
Confidence 53
No 129
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-41 Score=379.09 Aligned_cols=214 Identities=32% Similarity=0.482 Sum_probs=187.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCH---HHhhcc
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL---HDLRSR 1344 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l---~~LR~~ 1344 (1510)
|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 478999999964 359999999999999999999999999999999999999999999999999987764 567889
Q ss_pred eEEecCccccCcc-cHHHhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHH
Q 000438 1345 FGIIPQEPVLFEG-TVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCL 1415 (1510)
Q Consensus 1345 i~iIpQdp~LF~g-TIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~L 1415 (1510)
++++||+|.+|.+ |+++|+... ...+ ++++.++++.+++.+.....+ .+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~i 147 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYP-----------AELSGGMKKRVAL 147 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHH
Confidence 9999999999986 999999632 1123 245677888888876554333 3689999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1416 GRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1416 ARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||||++|++|++++.|+++++++.
T Consensus 148 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 148 ARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999999998653 7899999999999886 999999999999999999998865
Q ss_pred Cc
Q 000438 1493 PS 1494 (1510)
Q Consensus 1493 ~~ 1494 (1510)
..
T Consensus 228 ~~ 229 (235)
T cd03261 228 DD 229 (235)
T ss_pred CC
Confidence 44
No 130
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-41 Score=372.29 Aligned_cols=215 Identities=30% Similarity=0.518 Sum_probs=196.5
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCC-CCCHHHhhcce
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDIS-LLGLHDLRSRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~-~i~l~~LR~~i 1345 (1510)
.++++|++++|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 58999999999887 67999999999999999999999999999999999999999999999999998 48899999999
Q ss_pred EEecCcc--ccCcccHHHhcCCCC---CCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1346 GIIPQEP--VLFEGTVRSNIDPIG---QYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1346 ~iIpQdp--~LF~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
|+|.|+| .+|..||.+.+.... ..+. +.+.++|+.+++.++....| .+||||||||+|||
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaIA 150 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAIA 150 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHhh
Confidence 9999999 799999999997432 3444 44778999999998855555 36899999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCC--ceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAA--CTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~--~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
.+|..+|+|||||||||+||+...+.+.+.+++..++ .|+|+|||+++.+.+ |||++||++|+++..|+|++++++.
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~~ 230 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFNDA 230 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhhh
Confidence 9999999999999999999999999999999997644 699999999999998 9999999999999999999998864
No 131
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-40 Score=379.65 Aligned_cols=218 Identities=24% Similarity=0.405 Sum_probs=193.3
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC---CCCcEEEEcCeeCCCCCHHHhhc
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE---PSGGRIIIDGIDISLLGLHDLRS 1343 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e---p~~G~I~IDG~dI~~i~l~~LR~ 1343 (1510)
.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.|+...+....|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 4789999999964 359999999999999999999999999999999999985 69999999999999888888899
Q ss_pred ceEEecCccccCcccHHHhcCCCC---C------CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1344 RFGIIPQEPVLFEGTVRSNIDPIG---Q------YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1344 ~i~iIpQdp~LF~gTIR~NLdp~~---~------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
+++|+||+|.+|..|+++|+.... . ..++++.++++.+++.+++..+ ..+.+.+||+|||||++
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDK-------LKQNALALSGGQQQRLC 152 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHH-------hcCCcccCCHHHHHHHH
Confidence 999999999999999999996421 1 1234578889999987655432 23345689999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
|||||+++|+||+|||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 232 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENP 232 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999999999987778999999999999875 9999999999999999999998754
No 132
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-40 Score=383.71 Aligned_cols=215 Identities=29% Similarity=0.492 Sum_probs=196.2
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.|+++|++.+|.... ||+|+|++|+.||.++++||||||||||+++|.||.+|++|+|.|||.|++++++.+ +.|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 689999999998643 999999999999999999999999999999999999999999999999999999887 6799
Q ss_pred EecCccccCcc-cHHHhcCC-CC--C----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1347 IIPQEPVLFEG-TVRSNIDP-IG--Q----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp-~~--~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
+|+|+..||.- ||++||.. .. . --++++.++++..++.+..+++|.. ||||||||++||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~~-----------LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPLQ-----------LSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCccc-----------CChhhHHHHHHHHH
Confidence 99999999966 99999973 22 1 1256788999999999999999864 69999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC-c
Q 000438 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP-S 1494 (1510)
Q Consensus 1419 LLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~-~ 1494 (1510)
|+++|++++||||.|+||......+...|++..+ +.|+|.|||+-...+. +|||.||++|+|.+.|+|.|+.+++ +
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n 227 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPAN 227 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccc
Confidence 9999999999999999999999999888887543 5799999999999887 9999999999999999999999988 5
Q ss_pred HH
Q 000438 1495 LF 1496 (1510)
Q Consensus 1495 ~f 1496 (1510)
.|
T Consensus 228 ~f 229 (338)
T COG3839 228 LF 229 (338)
T ss_pred hh
Confidence 54
No 133
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.3e-40 Score=353.78 Aligned_cols=222 Identities=30% Similarity=0.518 Sum_probs=194.6
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH---hh
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---LR 1342 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR 1342 (1510)
-.|++++|+++|.. ..|++||||+|++||..||+|+||||||||++++.|+..|++|+|.|+|.||.+++-++ +|
T Consensus 7 ~~I~vr~v~~~fG~--~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 7 PLIEVRGVTKSFGD--RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred ceEEEeeeeeecCC--EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 46999999999964 45999999999999999999999999999999999999999999999999999998654 69
Q ss_pred cceEEecCccccCcc-cHHHhcC-CCCCC---CHHHHH----HHHHHcCchHH-HHhCcCCccccccCCCCCCChhHHHH
Q 000438 1343 SRFGIIPQEPVLFEG-TVRSNID-PIGQY---SDEEIW----KSLERCQLKDV-VAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1510)
Q Consensus 1343 ~~i~iIpQdp~LF~g-TIR~NLd-p~~~~---sd~eI~----~aL~~~~L~~~-i~~lp~gLdt~v~e~G~nLS~GQrQr 1412 (1510)
+++|++.|.-.||+. ||+||+. |..+| +++++. .-|+.+||... ....| +.||||.|.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHHH
Confidence 999999999999977 9999997 55444 455544 45778888877 33444 3589999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000438 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1413 l~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
++|||||.-+|+||++|||||++|+-+...+-+.|++... +.|+++|||+++++.. ||||+++.+|+|+-.|+|+++
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999887643 7899999999999988 899999999999999999999
Q ss_pred hcCC-cHHHHHH
Q 000438 1490 LERP-SLFGALV 1500 (1510)
Q Consensus 1490 l~~~-~~f~~lv 1500 (1510)
.+.+ -..++.+
T Consensus 234 ~~sd~P~v~qf~ 245 (263)
T COG1127 234 LASDDPWVRQFF 245 (263)
T ss_pred HhCCCHHHHHHh
Confidence 9877 4444433
No 134
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-40 Score=373.69 Aligned_cols=219 Identities=28% Similarity=0.466 Sum_probs=192.7
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+...+..++|++++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EecCccccCcccHHHhcCCCC---CCCHHHHHHHHHHcCch-HHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccC
Q 000438 1347 IIPQEPVLFEGTVRSNIDPIG---QYSDEEIWKSLERCQLK-DVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKH 1422 (1510)
Q Consensus 1347 iIpQdp~LF~gTIR~NLdp~~---~~sd~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~ 1422 (1510)
++||+|.+|..|+++|+.... ...++++.++++..++. +.... ...+||+|||||++||||++++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYATR-----------DVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhhC-----------CcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999997421 22345678888888885 33322 2357999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC-cHHHH
Q 000438 1423 SRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP-SLFGA 1498 (1510)
Q Consensus 1423 ~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~-~~f~~ 1498 (1510)
|++|||||||++||.++.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|++++++.++ ..|.+
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 99999999999999999999999999864 37899999999999886 9999999999999999999998766 33443
No 135
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-40 Score=383.34 Aligned_cols=216 Identities=26% Similarity=0.457 Sum_probs=192.6
Q ss_pred eEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1267 NVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
.++++|++++|+.. ...+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743 24599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEecCcc--ccCcccHHHhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1346 GIIPQEP--VLFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1346 ~iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
+++||+| .++..||++||.... ..+ ++++.++++.++|.++....| .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 356779999996321 123 356788999999987766554 36899999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
|||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||||++|++|++++.|+++++.+++
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSRG 231 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcCh
Confidence 999999999999999999999999999999998653 78999999999999789999999999999999999988654
No 136
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=3.6e-40 Score=372.10 Aligned_cols=217 Identities=29% Similarity=0.533 Sum_probs=198.2
Q ss_pred CCceEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhh
Q 000438 1264 AHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLR 1342 (1510)
Q Consensus 1264 ~~g~I~f~~vs~~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR 1342 (1510)
..|.++++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+....|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45789999999999753 23599999999999999999999999999999999999999999999999999888777888
Q ss_pred cceEEecCccccCcccHHHhcCC-CCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHcc
Q 000438 1343 SRFGIIPQEPVLFEGTVRSNIDP-IGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1510)
Q Consensus 1343 ~~i~iIpQdp~LF~gTIR~NLdp-~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1421 (1510)
++++++||+|.+|.+|+++|++. ......+++++..+..++.+++..+|.|+++.+.+...+||+|||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999984 23344556777777888899999998899988888899999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEE
Q 000438 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWA 1480 (1510)
Q Consensus 1422 ~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~i 1480 (1510)
+|++|||||||++||+++.+.+.+.|++..+++|+|+|+|+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999987777899999999999988999999999975
No 137
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.5e-40 Score=340.13 Aligned_cols=207 Identities=25% Similarity=0.417 Sum_probs=187.9
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH---hhcc
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---LRSR 1344 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR~~ 1344 (1510)
|+|+||+.+|+.+ +++|+||||+|++||.+=++|+|||||||++++|++...|+.|+|.++|.|++++.-++ ||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 7999999999987 77999999999999999999999999999999999999999999999999999997665 7999
Q ss_pred eEEecCccccCc-ccHHHhcC-CCC--CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1345 FGIIPQEPVLFE-GTVRSNID-PIG--QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1345 i~iIpQdp~LF~-gTIR~NLd-p~~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
||+|.||--|.. -|+.||+. |.. ..+ .+++.++|+.+||++....+|.. |||||+||+|||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~~-----------LSGGEQQRvaIA 149 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPSQ-----------LSGGEQQRVAIA 149 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCccc-----------cCchHHHHHHHH
Confidence 999999998775 59999996 332 223 35678899999999999999964 699999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKP 1486 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp 1486 (1510)
||+..+|++|+-||||.+||+++...|++.+.+.- .|.||++.||+.+.+.+ --|++.+++|+++..+.+
T Consensus 150 RAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 150 RAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 99999999999999999999999999999998764 58899999999999988 578999999999987664
No 138
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-40 Score=383.08 Aligned_cols=215 Identities=33% Similarity=0.521 Sum_probs=186.7
Q ss_pred eEEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCC--HHHh
Q 000438 1267 NVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG--LHDL 1341 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~--l~~L 1341 (1510)
.|+++||+++|+... .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++..+ ...+
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 378999999997532 36999999999999999999999999999999999999999999999999998753 4578
Q ss_pred hcceEEecCcc--ccCcccHHHhcCCCC---CCCH----HHHHHHHHHcCch--HHHHhCcCCccccccCCCCCCChhHH
Q 000438 1342 RSRFGIIPQEP--VLFEGTVRSNIDPIG---QYSD----EEIWKSLERCQLK--DVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1342 R~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~--~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
|++++|+||+| .+|+.|+++|+.... ..++ +++.++++.++|. +... .....||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~~~LSgGq~ 150 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKD-----------KSPFELSGGQK 150 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhcc-----------CCcccCCHHHH
Confidence 89999999998 578899999996321 2333 3567888888885 2222 22357999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChh
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPS 1487 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~ 1487 (1510)
||++|||||+.+|+||||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|+++
T Consensus 151 qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~ 230 (287)
T PRK13637 151 RRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPR 230 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999998653 7899999999999865 9999999999999999999
Q ss_pred HHhcC
Q 000438 1488 RLLER 1492 (1510)
Q Consensus 1488 ~Ll~~ 1492 (1510)
+++++
T Consensus 231 ~~~~~ 235 (287)
T PRK13637 231 EVFKE 235 (287)
T ss_pred HHHhC
Confidence 98764
No 139
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-40 Score=381.08 Aligned_cols=216 Identities=27% Similarity=0.451 Sum_probs=193.6
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.++++||+++|+...+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999754456999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EecCcc--ccCcccHHHhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1347 IIPQEP--VLFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1347 iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
|+||+| .++..|+++||.... ..+ ++++.++++.++|.+++...|. .||+|||||++|||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----------~LS~G~~qrv~lar 153 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREPH-----------RLSGGQKQRVAIAG 153 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCcc-----------cCCHHHHHHHHHHH
Confidence 999998 466789999996321 123 2457888999999887776653 68999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+++|+++.+..||||++|++|++++.|+++++++.+
T Consensus 154 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (279)
T PRK13635 154 VLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKSG 231 (279)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcCH
Confidence 99999999999999999999999999999998754 78999999999999889999999999999999999987653
No 140
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-40 Score=380.60 Aligned_cols=212 Identities=25% Similarity=0.418 Sum_probs=189.3
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
-|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999643 35999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EecCcc--ccCcccHHHhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1347 IIPQEP--VLFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1347 iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
|+||+| .+|..|+++|+.... ..+ ++++.++++.+++.+.....|. .||||||||++|||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----------~LSgG~~qrv~lar 151 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPPY-----------HLSYGQKKRVAIAG 151 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCChh-----------hCCHHHHHHHHHHH
Confidence 999998 688899999996321 122 3567889999999877666553 58999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
||+++|++|||||||++||+.+...+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|+++++.
T Consensus 152 aL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 152 VLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999999999999864 37899999999999865 9999999999999999987543
No 141
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-40 Score=389.72 Aligned_cols=216 Identities=27% Similarity=0.449 Sum_probs=191.9
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.++++|++++|+.+ ..+|+|+||+|++||.+||+|+||||||||+++|.|+.+|++|+|.+||.++.+++.+ +++|+
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 48999999999533 4599999999999999999999999999999999999999999999999999987765 46899
Q ss_pred EecCccccCc-ccHHHhcCCC-C--CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1347 IIPQEPVLFE-GTVRSNIDPI-G--QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1347 iIpQdp~LF~-gTIR~NLdp~-~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
+|||++.+|. .|+++|+... . ..+ ++++.++++.++|.++..+.|. +||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----------~LSgGq~QRvalARA 148 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKPR-----------ELSGGQRQRVAMGRA 148 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCChh-----------hCCHHHHHHHHHHHH
Confidence 9999999996 5999999632 1 223 3457889999999888777663 689999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC-c
Q 000438 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP-S 1494 (1510)
Q Consensus 1419 LLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~-~ 1494 (1510)
|+++|+||+||||||+||..+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++++++ .
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (356)
T PRK11650 149 IVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPAS 228 (356)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCcc
Confidence 9999999999999999999999999999988654 6899999999998876 9999999999999999999999887 4
Q ss_pred HH
Q 000438 1495 LF 1496 (1510)
Q Consensus 1495 ~f 1496 (1510)
.|
T Consensus 229 ~~ 230 (356)
T PRK11650 229 TF 230 (356)
T ss_pred HH
Confidence 44
No 142
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-40 Score=376.11 Aligned_cols=220 Identities=27% Similarity=0.434 Sum_probs=191.9
Q ss_pred CceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-----CCCcEEEEcCeeCCC--CC
Q 000438 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LG 1337 (1510)
Q Consensus 1265 ~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~ 1337 (1510)
.+.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 467999999999964 359999999999999999999999999999999999986 589999999999863 45
Q ss_pred HHHhhcceEEecCccccCcccHHHhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhH
Q 000438 1338 LHDLRSRFGIIPQEPVLFEGTVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1338 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
...+|++++|+||+|.+|..|+++|+... ...+ +++++++++.+++.+.+.. ...+...+||+||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKD-------KLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHH-------HHhcCCCCCCHHH
Confidence 66789999999999999999999999632 1222 3567888999888544321 2334456899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSR 1488 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1488 (1510)
|||++|||||+++|+||||||||++||.++.+.+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 241 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDT 241 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988667899999999999876 99999999999999999999
Q ss_pred HhcCC
Q 000438 1489 LLERP 1493 (1510)
Q Consensus 1489 Ll~~~ 1493 (1510)
+++.+
T Consensus 242 ~~~~~ 246 (260)
T PRK10744 242 IFTKP 246 (260)
T ss_pred HHhCC
Confidence 98765
No 143
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-40 Score=389.89 Aligned_cols=215 Identities=32% Similarity=0.502 Sum_probs=189.2
Q ss_pred EEEEEEEEEecC--CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH---hh
Q 000438 1268 VDLIDLQVRYRS--NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---LR 1342 (1510)
Q Consensus 1268 I~f~~vs~~Y~~--~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR 1342 (1510)
|+++|++++|+. +...+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999973 2346999999999999999999999999999999999999999999999999999887654 47
Q ss_pred cceEEecCccccCc-ccHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1343 SRFGIIPQEPVLFE-GTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1343 ~~i~iIpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
++++|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+.....| .+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYP-----------AQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999886 6999999632 1222 245777888888876654433 368999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
|||||+++|+||+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+++++++
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998653 7899999999999987 99999999999999999999987
Q ss_pred CC
Q 000438 1492 RP 1493 (1510)
Q Consensus 1492 ~~ 1493 (1510)
++
T Consensus 231 ~~ 232 (343)
T PRK11153 231 HP 232 (343)
T ss_pred CC
Confidence 75
No 144
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.8e-40 Score=369.56 Aligned_cols=210 Identities=26% Similarity=0.418 Sum_probs=184.0
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++|++++|+.+..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.... .++|+++++
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEE
Confidence 5789999999753345999999999999999999999999999999999999999999999999987643 667889999
Q ss_pred ecCccccC-cccHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLF-EGTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF-~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||+|.+| ..|+++|+... ...+ ++++.++++..++.+.....+ .+||+|||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKRA-----------RTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChh-----------hhCCHHHHHHHHHHHHH
Confidence 99999998 57999999531 1122 345778888888866543322 36999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
+++|++|||||||++||+.+.+.+.+.|++..+++|+|+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999988777999999999999976 999999999999999999875
No 145
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.9e-40 Score=356.10 Aligned_cols=204 Identities=32% Similarity=0.491 Sum_probs=178.1
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH---h-
Q 000438 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---L- 1341 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---L- 1341 (1510)
++++|++..|..+. ..+|+|+||+|++||.|+|+||||||||||+++|-++..|++|+|.++|.|+..++-++ +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999997543 36999999999999999999999999999999999999999999999999999998544 3
Q ss_pred hcceEEecCccccCcc-cHHHhcC-C--CCCCC----HHHHHHHHHHcCchHHHH-hCcCCccccccCCCCCCChhHHHH
Q 000438 1342 RSRFGIIPQEPVLFEG-TVRSNID-P--IGQYS----DEEIWKSLERCQLKDVVA-AKPDKLDSLVADSGDNWSVGQRQL 1412 (1510)
Q Consensus 1342 R~~i~iIpQdp~LF~g-TIR~NLd-p--~~~~s----d~eI~~aL~~~~L~~~i~-~lp~gLdt~v~e~G~nLS~GQrQr 1412 (1510)
|++||+|+|+..|++. |++||+. | +.... ++.+.+.++.++|.+... ..|. .||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p~-----------eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKPS-----------ELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCch-----------hcCHHHHHH
Confidence 5679999999998866 9999996 2 22222 456677788889987665 4453 579999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhhcCEEEEEeCCEEEE
Q 000438 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMDCDRVIVVDAGWAKE 1482 (1510)
Q Consensus 1413 l~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE 1482 (1510)
+||||||+.+|+|++.||||++||.+|.+.|.+.+++.- .++|+|+|||+......|||++.|.+|++.+
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999874 3789999999999999999999999999543
No 146
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.4e-40 Score=363.10 Aligned_cols=199 Identities=27% Similarity=0.442 Sum_probs=183.2
Q ss_pred EEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcc
Q 000438 1268 VDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSR 1344 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~ 1344 (1510)
++++||+++|++.. +++|+|+||+|++||+++|+|++|||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57899999997642 3699999999999999999999999999999999999999999999999 6
Q ss_pred eEEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000438 1345 FGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1510)
Q Consensus 1345 i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~k 1424 (1510)
++|+||+|.+|++|+++|+......++++.+++++.+++.+++..+|.|+++.+.+.+.+||+|||||++|||||+++|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998755566778889999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHH-HHHHHcC-CceEEEEecChhhhhhcCEEEEEeCCE
Q 000438 1425 LLFMDEATASVDSQTDAEIQR-IIREEFA-ACTIISIAHRIPTVMDCDRVIVVDAGW 1479 (1510)
Q Consensus 1425 ILiLDEaTsslD~~Td~~Iq~-~I~~~f~-~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1510)
+++|||||++||+++.+.+.+ .+++..+ +.|||++||+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999887766 5665543 689999999999999999999999985
No 147
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-40 Score=350.96 Aligned_cols=213 Identities=28% Similarity=0.481 Sum_probs=190.8
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCC---HHHhhc
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG---LHDLRS 1343 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~---l~~LR~ 1343 (1510)
.|+++||+.+|+.+ ..+|+||||+|++||.|+|+|+||||||||+++|.|+.+|++|+|.++|.++..+. ++++|+
T Consensus 3 ~i~~~nl~k~yp~~-~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPGG-HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCCC-ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 58999999999854 46999999999999999999999999999999999999999999999999999988 777889
Q ss_pred ceEEecCccccCcc-cHHHhcCC------------CCCCCH---HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCh
Q 000438 1344 RFGIIPQEPVLFEG-TVRSNIDP------------IGQYSD---EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSV 1407 (1510)
Q Consensus 1344 ~i~iIpQdp~LF~g-TIR~NLdp------------~~~~sd---~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~ 1407 (1510)
++|+|.|.|.|-.. |+-+|+.- |+-++. .+..+||+++|+.+..-... ++|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra-----------~~LSG 150 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA-----------STLSG 150 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh-----------ccCCc
Confidence 99999999998755 99999831 333443 45788999999988765442 46899
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1408 GQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1408 GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
||+||++|||||.++|+|++-|||||+||+++.+.|++.|++.. .+.|||+.-|.++..+. ||||+-|++|+|+-.|
T Consensus 151 GQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg 230 (258)
T COG3638 151 GQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDG 230 (258)
T ss_pred chhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeC
Confidence 99999999999999999999999999999999999999999865 47899999999999987 9999999999999999
Q ss_pred ChhHHhc
Q 000438 1485 KPSRLLE 1491 (1510)
Q Consensus 1485 sp~~Ll~ 1491 (1510)
+++||-+
T Consensus 231 ~~~el~~ 237 (258)
T COG3638 231 PASELTD 237 (258)
T ss_pred ChhhhhH
Confidence 9999643
No 148
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=374.80 Aligned_cols=218 Identities=28% Similarity=0.432 Sum_probs=189.8
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-----CCCcEEEEcCeeCCC--CCHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1339 (1510)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 359999999999999999999999999999999999975 589999999999875 3456
Q ss_pred HhhcceEEecCccccCcccHHHhcCCC----CC----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI----GQ----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
.+|++++|+||++.+|.+|+++|+... +. ..++++.++++.+++.+.+.. .......+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~q 156 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQQ 156 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHHH
Confidence 778999999999999999999999631 11 124567888999988664432 123345689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++|||||+++|+||+|||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999976 9999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
+++
T Consensus 237 ~~~ 239 (253)
T PRK14242 237 TRP 239 (253)
T ss_pred cCC
Confidence 765
No 149
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-40 Score=371.63 Aligned_cols=212 Identities=25% Similarity=0.448 Sum_probs=184.6
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 2 SIEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 3789999999964 459999999999999999999999999999999999999999999999999876543 367899
Q ss_pred EecCccccCc-ccHHHhcCCCC---CC----C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1347 IIPQEPVLFE-GTVRSNIDPIG---QY----S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1347 iIpQdp~LF~-gTIR~NLdp~~---~~----s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
|+||+|.+|. .|+++|+.... .. + ++++.++++..++.+.....+ .+||+|||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----------AQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHHH
Confidence 9999999986 59999996321 11 1 245677888888866554433 468999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
|||||+++|+||||||||++||+++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998643 6899999999998876 99999999999999999999987
Q ss_pred CC
Q 000438 1492 RP 1493 (1510)
Q Consensus 1492 ~~ 1493 (1510)
++
T Consensus 227 ~~ 228 (239)
T cd03296 227 HP 228 (239)
T ss_pred CC
Confidence 55
No 150
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=355.86 Aligned_cols=207 Identities=29% Similarity=0.406 Sum_probs=172.7
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TTA 711 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ia 711 (1510)
|+++|+++.|. ++.+++|+||+|++||+++++||+||||||+|++|.++++|++|+|.++| +||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 78999999996 46899999999999999999999999999999999999999999999998 389
Q ss_pred EEcCCCcC-CCccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000438 712 YVAQTSWI-QNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1510)
Q Consensus 712 yv~Q~~~i-~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~ 787 (1510)
||-|+.-+ ++.||.|||.+-.. +++++.++.. ++-++.+.........+.+.+|||||+|||.+||||+.+
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~-----~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAad 153 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRA-----DELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAAD 153 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHH-----HHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcC
Confidence 99999766 47899999987533 3333332211 112222222111234567899999999999999999999
Q ss_pred CCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcc-ccCCEEEEEeCCEEEEecChHHHHhcC
Q 000438 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFL-HNVDLILVMREGMIVQSGRYNALLNSG 859 (1510)
Q Consensus 788 ~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l-~~~D~i~~l~~G~i~~~g~~~~l~~~~ 859 (1510)
|+|+|+||||+||||-+++.+-+++.+...+ |||+|+||||+++. +.+|||.+|++|+|++.+++++++.+.
T Consensus 154 P~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 154 PPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred CCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 9999999999999999999997776655443 89999999999985 569999999999999999999998753
No 151
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.9e-39 Score=372.42 Aligned_cols=217 Identities=27% Similarity=0.410 Sum_probs=194.9
Q ss_pred CceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcc
Q 000438 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSR 1344 (1510)
Q Consensus 1265 ~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~ 1344 (1510)
.+.|+++|++++ + .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~---~-~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLV---G-APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEe---c-ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 356999999995 2 3599999999999999999999999999999999999999999999998 3
Q ss_pred eEEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000438 1345 FGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1510)
Q Consensus 1345 i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~k 1424 (1510)
++|+||++.+|++|+++|+.......+.++.++++.+++.+.+..+|.++++.+.+.+.+||+|||||++|||||+++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999997543345566788889999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHH-HHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCcHHHH
Q 000438 1425 LLFMDEATASVDSQTDAEIQRI-IREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGA 1498 (1510)
Q Consensus 1425 ILiLDEaTsslD~~Td~~Iq~~-I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~ 1498 (1510)
||||||||++||+++...+.+. +++..++.|||+|+|+++.+..||+|++|++|+++++|+++++.+....|.+
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~ 254 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLRPDFSS 254 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcchHHHH
Confidence 9999999999999999988765 4555568999999999999988999999999999999999999865544443
No 152
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.2e-40 Score=373.40 Aligned_cols=212 Identities=30% Similarity=0.494 Sum_probs=184.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCC---HHHhhcc
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG---LHDLRSR 1344 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~---l~~LR~~ 1344 (1510)
++++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999742 45999999999999999999999999999999999999999999999999998876 4567889
Q ss_pred eEEecCccccCc-ccHHHhcCCC------------C---CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChh
Q 000438 1345 FGIIPQEPVLFE-GTVRSNIDPI------------G---QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVG 1408 (1510)
Q Consensus 1345 i~iIpQdp~LF~-gTIR~NLdp~------------~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1408 (1510)
++++||++.+|. .|+++|+... + ...++++.++++..++.+.... ...+||+|
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G 148 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQ-----------RADQLSGG 148 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCC-----------CcccCCHH
Confidence 999999998886 6999999521 1 1123457778888887654332 33579999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecC
Q 000438 1409 QRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGK 1485 (1510)
Q Consensus 1409 QrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gs 1485 (1510)
||||++|||||+++|+||||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|++++.|+
T Consensus 149 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 228 (241)
T cd03256 149 QQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGP 228 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999999999999999999999864 37899999999999985 99999999999999999
Q ss_pred hhHHhc
Q 000438 1486 PSRLLE 1491 (1510)
Q Consensus 1486 p~~Ll~ 1491 (1510)
++++.+
T Consensus 229 ~~~~~~ 234 (241)
T cd03256 229 PAELTD 234 (241)
T ss_pred HHHhhH
Confidence 998743
No 153
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-40 Score=364.71 Aligned_cols=206 Identities=30% Similarity=0.422 Sum_probs=175.3
Q ss_pred EEEeeeEEEccCC--CCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------
Q 000438 645 VEVRDGVFSWDDE--NGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------- 708 (1510)
Q Consensus 645 i~~~~~~f~~~~~--~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 708 (1510)
|+++++++.|... ...++|+||||+|++||+.+|+|.+|+|||||++++.|+..|++|+|.++|
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999753 124689999999999999999999999999999999999999999999999
Q ss_pred --eEEEEcCCCcCCC-ccHHHHHhcCCCCCh----hhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHH
Q 000438 709 --TTAYVAQTSWIQN-GTIEENILFGLPMNR----AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1510)
Q Consensus 709 --~iayv~Q~~~i~~-~Tv~enI~fg~~~~~----~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1510)
+||+++|++.+.+ .||.+||.|..+... +..++|.+. ++.....| ..+..+.+|||||||||+||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~el------LelVgL~d--k~~~yP~qLSGGQKQRVaIA 153 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAEL------LELVGLSD--KADRYPAQLSGGQKQRVAIA 153 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHH------HHHcCChh--hhccCchhcCcchhhHHHHH
Confidence 3899999998776 899999999866432 233333332 23333222 34678899999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000438 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 782 Ral~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
|||+.+|+|+|.|||||||||++.+.|.+.+.+... -|-|+++|||.++.++. |||+.||++|+++++|+..++...
T Consensus 154 RALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~ 232 (339)
T COG1135 154 RALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFAN 232 (339)
T ss_pred HHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcC
Confidence 999999999999999999999999999976655433 48999999999999986 999999999999999999998754
No 154
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=387.23 Aligned_cols=216 Identities=25% Similarity=0.434 Sum_probs=191.9
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
..|+++|++++|.. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++...+.+ |+++
T Consensus 5 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred cEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 46999999999963 4589999999999999999999999999999999999999999999999999877654 5789
Q ss_pred EEecCccccCcc-cHHHhcCC-CC--CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDP-IG--QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp-~~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
++|+|++.+|.. |+++|+.. .. ..+ ++++.++++.+++.++..+.| ..||||||||++|||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----------~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV-----------DQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999975 99999973 11 122 456788999999987765554 368999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC-
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP- 1493 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~- 1493 (1510)
||+++|+||+||||||+||+.+...+++.|++..+ +.|+|+|||+.+.+.. ||||+||++|++++.|+|+++.+++
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998754 7899999999999876 9999999999999999999999887
Q ss_pred cHH
Q 000438 1494 SLF 1496 (1510)
Q Consensus 1494 ~~f 1496 (1510)
..|
T Consensus 230 ~~~ 232 (351)
T PRK11432 230 SRF 232 (351)
T ss_pred chH
Confidence 443
No 155
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=374.06 Aligned_cols=218 Identities=27% Similarity=0.409 Sum_probs=189.9
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCC--CCHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISL--LGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~l~ 1339 (1510)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. ....
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 7 IIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred eEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 6999999999974 3599999999999999999999999999999999999997 48999999999863 3455
Q ss_pred HhhcceEEecCccccCcccHHHhcCCC----CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI----GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
.+|++++|+||+|.+|..|+++|+... +.. .++.+.++++.+++.+.+. +.+|+ ...+|||||||
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~~----~~~~LSgG~~q 157 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK---DKLNT----NALSLSGGQQQ 157 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH---HHHhC----CcccCCHHHHH
Confidence 678899999999999999999999632 111 2456778888888864432 23444 34689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++|||||+++|++|||||||++||..+...+.+.|++..+++|+|+|+|+++.+.+ ||||++|++|++++.|+++++.
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 158 RLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998667899999999999876 9999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
+++
T Consensus 238 ~~~ 240 (254)
T PRK14273 238 FNP 240 (254)
T ss_pred hCC
Confidence 765
No 156
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-40 Score=362.78 Aligned_cols=210 Identities=30% Similarity=0.477 Sum_probs=169.6
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----------eEEE
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----------TTAY 712 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------~iay 712 (1510)
..|+++|++++|+. . ++|+||||++++|++++|+||||||||||+++|+|.++|.+|+|.+.| +|||
T Consensus 3 ~~i~v~nl~v~y~~--~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgY 79 (254)
T COG1121 3 PMIEVENLTVSYGN--R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGY 79 (254)
T ss_pred cEEEEeeeEEEECC--E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEE
Confidence 46899999999963 2 699999999999999999999999999999999999999999999876 4999
Q ss_pred EcCC---CcCCCccHHHHHhcCCCCChhhHHHHH--HHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000438 713 VAQT---SWIQNGTIEENILFGLPMNRAKYGEVV--RVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1510)
Q Consensus 713 v~Q~---~~i~~~Tv~enI~fg~~~~~~~~~~v~--~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~ 787 (1510)
|||. .|-+..||+|-+.+|......++++.- +....++-++.....+ .......+|||||+|||-|||||+++
T Consensus 80 VPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~--~~~r~i~~LSGGQ~QRV~lARAL~~~ 157 (254)
T COG1121 80 VPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMED--LRDRQIGELSGGQKQRVLLARALAQN 157 (254)
T ss_pred cCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchh--hhCCcccccCcHHHHHHHHHHHhccC
Confidence 9996 477889999999998654332222110 0011122223222221 23455668999999999999999999
Q ss_pred CCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000438 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 788 ~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
||+++|||||+++|+.++..+++.+.+...+|+||++||||++.+. .+|+|+.|+ +++...|++++..+.
T Consensus 158 p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~~~ 228 (254)
T COG1121 158 PDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVLTE 228 (254)
T ss_pred CCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhccCH
Confidence 9999999999999999999999766666666999999999999875 599999995 567788999987753
No 157
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=375.42 Aligned_cols=222 Identities=25% Similarity=0.441 Sum_probs=191.2
Q ss_pred CCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-----CCCcEEEEcCeeCCC--
Q 000438 1263 PAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL-- 1335 (1510)
Q Consensus 1263 p~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~-- 1335 (1510)
|....|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++..
T Consensus 9 ~~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~ 86 (269)
T PRK14259 9 SKNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPR 86 (269)
T ss_pred CCCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 34457999999999974 359999999999999999999999999999999999987 689999999999863
Q ss_pred CCHHHhhcceEEecCccccCcccHHHhcCCCC---CC---CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhH
Q 000438 1336 LGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG---QY---SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1336 i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
.+..++|++++|+||+|.+|.+|+++|+.... .. .++++.++++.+++.+.+. ........+||+||
T Consensus 87 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 159 (269)
T PRK14259 87 VDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSGGQ 159 (269)
T ss_pred CCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCHHH
Confidence 56677889999999999999899999997422 11 2456777888888754332 12233346799999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeC-----------
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDA----------- 1477 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~----------- 1477 (1510)
|||++|||||+++|+||||||||++||+.+...+.+.|++..++.|||++||+++.+.+ ||+|++|++
T Consensus 160 ~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~ 239 (269)
T PRK14259 160 QQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKV 239 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEecccccccccccc
Confidence 99999999999999999999999999999999999999987667899999999999876 999999996
Q ss_pred CEEEEecChhHHhcCC
Q 000438 1478 GWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1478 G~ivE~gsp~~Ll~~~ 1493 (1510)
|+++|.|+++++++++
T Consensus 240 g~~~~~~~~~~~~~~~ 255 (269)
T PRK14259 240 GYLVEFNETKKIFNSP 255 (269)
T ss_pred ceEEEeCCHHHHHhCc
Confidence 6799999999998765
No 158
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.4e-39 Score=374.72 Aligned_cols=224 Identities=26% Similarity=0.348 Sum_probs=200.8
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1510)
.|+++|+++.|++. ..++|+|+||+|++||+++|+|+||||||||+++|.|+++ .+|+|.++| .+
T Consensus 2 ~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 2 QMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred eEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 48899999999642 3469999999999999999999999999999999999998 899999988 37
Q ss_pred EEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000438 711 AYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1510)
Q Consensus 711 ayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i 790 (1510)
+|+||+|+++++|++||+....++..++..+.++.+++...+..+|.+.++.+++.|.+||||||||++||||++.+|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999964334556677788889999988999999999999999999999999999999999999999
Q ss_pred EEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcchHHHHHHhh
Q 000438 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGALVAAHE 870 (1510)
Q Consensus 791 ~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~l~~~~~ 870 (1510)
+||||||++||+.+.+.+.+.+.. ..+++|+|+|||+++.+..||+|++|++|++++.|+++++++....|..++....
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~-~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQ-AFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHH-hcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhhcc
Confidence 999999999999999888765543 3468999999999999888999999999999999999999997777787776543
No 159
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=6.5e-40 Score=367.38 Aligned_cols=202 Identities=25% Similarity=0.402 Sum_probs=177.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHH---Hhhcc
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH---DLRSR 1344 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR~~ 1344 (1510)
++++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 689999999975434599999999999999999999999999999999999999999999999999876543 47889
Q ss_pred eEEecCccccCc-ccHHHhcCCC---CC----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1345 FGIIPQEPVLFE-GTVRSNIDPI---GQ----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1345 i~iIpQdp~LF~-gTIR~NLdp~---~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
++|+||+|.+|. .|+++|+... .. ..++++.++++.+++.+.....| .+||||||||++||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~la 150 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAIA 150 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999886 5999999631 11 12457888999999987665554 36899999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEE
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWA 1480 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~i 1480 (1510)
|||+++|+||+|||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999998864 37899999999999986 999999999985
No 160
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=9.2e-40 Score=371.30 Aligned_cols=213 Identities=30% Similarity=0.495 Sum_probs=183.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHh-hcceE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL-RSRFG 1346 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i~ 1346 (1510)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |.+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999964 359999999999999999999999999999999999999999999999999988876664 57799
Q ss_pred EecCccccCcc-cHHHhcCCCC----CC-------------CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChh
Q 000438 1347 IIPQEPVLFEG-TVRSNIDPIG----QY-------------SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVG 1408 (1510)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~~----~~-------------sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1408 (1510)
++||+|.+|.+ |+++|+.... .. .++++.++++..++.+.. ......||||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG 147 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLA-----------DRPAGELSYG 147 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchh-----------hCChhhCCHH
Confidence 99999999987 9999995321 10 122455666666664432 2233579999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000438 1409 QRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKP 1486 (1510)
Q Consensus 1409 QrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp 1486 (1510)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++
T Consensus 148 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 227 (236)
T cd03219 148 QQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTP 227 (236)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCH
Confidence 9999999999999999999999999999999999999999865 57899999999999977 999999999999999999
Q ss_pred hHHhcCC
Q 000438 1487 SRLLERP 1493 (1510)
Q Consensus 1487 ~~Ll~~~ 1493 (1510)
+++++++
T Consensus 228 ~~~~~~~ 234 (236)
T cd03219 228 DEVRNNP 234 (236)
T ss_pred HHhccCC
Confidence 9987653
No 161
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=378.80 Aligned_cols=215 Identities=29% Similarity=0.481 Sum_probs=187.8
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCC--CCCHHHhhcc
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDIS--LLGLHDLRSR 1344 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~--~i~l~~LR~~ 1344 (1510)
-|+++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+. ..+..++|++
T Consensus 5 ~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 58999999999633 45999999999999999999999999999999999999999999999999984 3456678999
Q ss_pred eEEecCcc--ccCcccHHHhcCCC---CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHH
Q 000438 1345 FGIIPQEP--VLFEGTVRSNIDPI---GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCL 1415 (1510)
Q Consensus 1345 i~iIpQdp--~LF~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~L 1415 (1510)
++|+||+| .+|+.|+++|+... ...+. +.+.++++.++|.++... ...+||+|||||++|
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LS~G~~qrl~l 152 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDK-----------PTHCLSFGQKKRVAI 152 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhC-----------CcccCCHHHHHHHHH
Confidence 99999998 57889999999631 12232 446777888888765432 245799999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1416 GRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1416 ARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
||||+.+|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||||++|++|++++.|+++++++.
T Consensus 153 araL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 153 AGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999998754 7899999999999975 999999999999999999998875
Q ss_pred C
Q 000438 1493 P 1493 (1510)
Q Consensus 1493 ~ 1493 (1510)
+
T Consensus 233 ~ 233 (283)
T PRK13636 233 K 233 (283)
T ss_pred H
Confidence 3
No 162
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=379.71 Aligned_cols=216 Identities=27% Similarity=0.399 Sum_probs=185.1
Q ss_pred eEEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCC----CHH
Q 000438 1267 NVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLL----GLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~ 1339 (1510)
.++++|++++|+.+. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997432 3599999999999999999999999999999999999999999999999999754 346
Q ss_pred HhhcceEEecCcc--ccCcccHHHhcCCCC---CCCH----HHHHHHHHHcCch-HHHHhCcCCccccccCCCCCCChhH
Q 000438 1340 DLRSRFGIIPQEP--VLFEGTVRSNIDPIG---QYSD----EEIWKSLERCQLK-DVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
.+|++|+|+||+| .+|..|+++|+.... ..+. +++.++++.++|. +... ....+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~~LSgGq 150 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMS-----------QSPFQMSGGQ 150 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh-----------CCcccCCHHH
Confidence 7899999999998 588899999996321 2232 3455666666664 2222 2345799999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKP 1486 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp 1486 (1510)
|||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|+|
T Consensus 151 ~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~ 230 (286)
T PRK13646 151 MRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSP 230 (286)
T ss_pred HHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999999864 47899999999999865 999999999999999999
Q ss_pred hHHhcCC
Q 000438 1487 SRLLERP 1493 (1510)
Q Consensus 1487 ~~Ll~~~ 1493 (1510)
+++++++
T Consensus 231 ~~~~~~~ 237 (286)
T PRK13646 231 KELFKDK 237 (286)
T ss_pred HHHHhCH
Confidence 9988764
No 163
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.2e-39 Score=370.55 Aligned_cols=217 Identities=29% Similarity=0.463 Sum_probs=188.8
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCC-----CcEEEEcCeeCCCC--CHHH
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS-----GGRIIIDGIDISLL--GLHD 1340 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~-----~G~I~IDG~dI~~i--~l~~ 1340 (1510)
++++|++++|+.. .+++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGEK--EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECCe--eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 7899999999743 4899999999999999999999999999999999999998 99999999999763 4556
Q ss_pred hhcceEEecCccccCcccHHHhcCCC---CC-CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHH
Q 000438 1341 LRSRFGIIPQEPVLFEGTVRSNIDPI---GQ-YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1510)
Q Consensus 1341 LR~~i~iIpQdp~LF~gTIR~NLdp~---~~-~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQr 1412 (1510)
.|++++|+||++.+|..|+++|+... .. .+ ++++.++++..++.+.+.. .++ ....+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~----~~~~~LSgG~~qr 152 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKD---RLH----DSALGLSGGQQQR 152 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhh---Hhh----CCcccCCHHHHHH
Confidence 78899999999999999999999631 11 12 3467888999998744321 122 2335799999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1413 l~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++++
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999999876 99999999999999999999987
Q ss_pred CC
Q 000438 1492 RP 1493 (1510)
Q Consensus 1492 ~~ 1493 (1510)
++
T Consensus 233 ~~ 234 (247)
T TIGR00972 233 NP 234 (247)
T ss_pred CC
Confidence 65
No 164
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-39 Score=369.16 Aligned_cols=214 Identities=32% Similarity=0.512 Sum_probs=187.3
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH---hh
Q 000438 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---LR 1342 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR 1342 (1510)
|+++|++++|+... .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+..+ .|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68999999997431 25999999999999999999999999999999999999999999999999998776543 47
Q ss_pred cceEEecCccccCc-ccHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1343 SRFGIIPQEPVLFE-GTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1343 ~~i~iIpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
++++++||+|.+|. .|+++|+... ...+ ++++.++++..++.+.....+ .+||+|||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYP-----------AQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcCh-----------hhCCHHHHHHHH
Confidence 88999999999997 5999999531 1122 456788899988876655443 468999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
|||||+++|++|||||||++||+.+...+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++++
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998643 7899999999999876 99999999999999999999876
Q ss_pred C
Q 000438 1492 R 1492 (1510)
Q Consensus 1492 ~ 1492 (1510)
+
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 4
No 165
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=9.3e-40 Score=387.99 Aligned_cols=201 Identities=29% Similarity=0.441 Sum_probs=181.6
Q ss_pred CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHh----hcceEEecCccccCcc
Q 000438 1282 PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL----RSRFGIIPQEPVLFEG 1357 (1510)
Q Consensus 1282 ~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L----R~~i~iIpQdp~LF~g 1357 (1510)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|+|||.|+...+..++ |++++||||++.+|..
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 458999999999999999999999999999999999999999999999999999998887 7899999999999975
Q ss_pred -cHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000438 1358 -TVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMD 1429 (1510)
Q Consensus 1358 -TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLD 1429 (1510)
||++|+... ...+ ++++.++|+.++|.++....|. +||||||||++|||||+++|+||+||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p~-----------~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYPD-----------ELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCChh-----------hCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999631 1122 4567889999999877666553 68999999999999999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1430 EATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1430 EaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
||||+||+.+.+.+++.+++.. .++|+|+|||+++.+.. ||||++|++|++++.|+|+++++++
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p 221 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNP 221 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCc
Confidence 9999999999999999998764 37899999999998766 9999999999999999999999876
No 166
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=378.59 Aligned_cols=214 Identities=25% Similarity=0.406 Sum_probs=185.5
Q ss_pred EEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCC----CCHHH
Q 000438 1268 VDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL----LGLHD 1340 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~----i~l~~ 1340 (1510)
|+++|++++|+++. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997543 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred hhcceEEecCcc--ccCcccHHHhcCCCC---CCC----HHHHHHHHHHcCch-HHHHhCcCCccccccCCCCCCChhHH
Q 000438 1341 LRSRFGIIPQEP--VLFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLK-DVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1341 LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
+|++++|++|+| .+|..|+.+|+.... ..+ ++++.++++.+++. ++.... ..+||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKS-----------PFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCC-----------cccCCHHHH
Confidence 899999999998 789999999996321 123 23467788888884 333222 347999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSR 1488 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1488 (1510)
||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. ++.|||+|||+++.+.. ||||++|++|++++.|+|++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998764 47899999999998865 99999999999999999999
Q ss_pred HhcC
Q 000438 1489 LLER 1492 (1510)
Q Consensus 1489 Ll~~ 1492 (1510)
+.++
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 8764
No 167
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.3e-40 Score=355.88 Aligned_cols=197 Identities=34% Similarity=0.439 Sum_probs=161.5
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------eEEEEcC
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------TTAYVAQ 715 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------~iayv~Q 715 (1510)
.+++++++++|+. ..+|+|+||+|++||+++|+||+||||||||++|+|+.+|++|+|.++| .+|||+|
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ 79 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQ 79 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEec
Confidence 5789999999964 6899999999999999999999999999999999999999999999988 4799999
Q ss_pred CCcC-CCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEe
Q 000438 716 TSWI-QNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLD 794 (1510)
Q Consensus 716 ~~~i-~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLD 794 (1510)
++-+ +..||+|||.||.+.....-.+. ++ ...+-++.....+ .-+..+.+|||||||||+||||++.+|+++|||
T Consensus 80 ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~-~~-~a~~~L~~VgL~~--~~~~~P~qLSGGMrQRVaiARAL~~~P~lLLlD 155 (248)
T COG1116 80 EDALLPWLTVLDNVALGLELRGKSKAEA-RE-RAKELLELVGLAG--FEDKYPHQLSGGMRQRVAIARALATRPKLLLLD 155 (248)
T ss_pred cCcccchhhHHhhheehhhccccchHhH-HH-HHHHHHHHcCCcc--hhhcCccccChHHHHHHHHHHHHhcCCCEEEEc
Confidence 9765 45799999999977531000000 00 1222333333222 234678899999999999999999999999999
Q ss_pred CccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccc-cCCEEEEEeC--CEEE
Q 000438 795 DVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMRE--GMIV 847 (1510)
Q Consensus 795 ep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~D~i~~l~~--G~i~ 847 (1510)
|||+|||+.|+.++.+.+.+.+.+ ++|+++||||+++.- -+|||++|.+ |+|.
T Consensus 156 EPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 156 EPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 999999999999998888776654 799999999999864 5999999998 4553
No 168
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=373.71 Aligned_cols=221 Identities=26% Similarity=0.417 Sum_probs=191.6
Q ss_pred CCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCC--C
Q 000438 1264 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISL--L 1336 (1510)
Q Consensus 1264 ~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i 1336 (1510)
+.+.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3468999999999964 3599999999999999999999999999999999999975 89999999999875 3
Q ss_pred CHHHhhcceEEecCccccCcccHHHhcCCC---CCC--C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCh
Q 000438 1337 GLHDLRSRFGIIPQEPVLFEGTVRSNIDPI---GQY--S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSV 1407 (1510)
Q Consensus 1337 ~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~--s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~ 1407 (1510)
+...+|++++++||+|.+|.+|+++|+... ... + ++++.++++.+++.+.+.. .......+||+
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKD-------RLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCH
Confidence 456788999999999999989999999631 111 1 3457888999988654431 12234567999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000438 1408 GQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKP 1486 (1510)
Q Consensus 1408 GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp 1486 (1510)
|||||++|||||+.+|+||||||||++||+.+...+.+.|++..++.|||+++|+++.+.. ||+|++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999987667899999999999976 899999999999999999
Q ss_pred hHHhcCC
Q 000438 1487 SRLLERP 1493 (1510)
Q Consensus 1487 ~~Ll~~~ 1493 (1510)
++++.++
T Consensus 247 ~~~~~~~ 253 (267)
T PRK14235 247 EKMFTNP 253 (267)
T ss_pred HHHHhCC
Confidence 9998654
No 169
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.8e-39 Score=386.53 Aligned_cols=215 Identities=27% Similarity=0.435 Sum_probs=191.4
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.++++|++++|.. ..+|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ +++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999974 3589999999999999999999999999999999999999999999999999887764 67899
Q ss_pred EecCccccCc-ccHHHhcCCC-C--CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1347 IIPQEPVLFE-GTVRSNIDPI-G--QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1347 iIpQdp~LF~-gTIR~NLdp~-~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
++||++.+|. .|+++|+... . ..+ ++++.++++..+|.++....| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYP-----------GQLSGGQQQRVALARA 148 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999999996 5999999631 1 122 456788899998887766555 3689999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC-c
Q 000438 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP-S 1494 (1510)
Q Consensus 1419 LLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~-~ 1494 (1510)
|+++|++|+||||||+||..+...+++.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++ .
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPAT 228 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCC
Confidence 9999999999999999999999999999988654 7899999999999876 9999999999999999999999987 5
Q ss_pred HH
Q 000438 1495 LF 1496 (1510)
Q Consensus 1495 ~f 1496 (1510)
.|
T Consensus 229 ~~ 230 (353)
T TIGR03265 229 PF 230 (353)
T ss_pred HH
Confidence 55
No 170
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-39 Score=369.39 Aligned_cols=214 Identities=28% Similarity=0.444 Sum_probs=187.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|++. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999753 459999999999999999999999999999999999999999999999999998888888999999
Q ss_pred ecCccccCc-ccHHHhcCCCC---CCC----HHHHHHHHHHcCchH--HHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1348 IPQEPVLFE-GTVRSNIDPIG---QYS----DEEIWKSLERCQLKD--VVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~--~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
+||+|.+|. .|+++|+.... ..+ ++++.++++..++.+ ... ....+||+|||||++|||
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~-----------~~~~~LS~G~~qrv~lar 148 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFAD-----------RYPHELSGGQQQRVGVAR 148 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHh-----------cChhhCCHHHHHHHHHHH
Confidence 999999986 69999996321 122 345777888887763 322 223579999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
||+++|++|+|||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++.+++
T Consensus 149 al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 227 (242)
T cd03295 149 ALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSP 227 (242)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCC
Confidence 99999999999999999999999999999998653 7899999999998866 9999999999999999999998765
No 171
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-39 Score=371.98 Aligned_cols=218 Identities=31% Similarity=0.437 Sum_probs=188.7
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCC--CCCHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDIS--LLGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~--~i~l~ 1339 (1510)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 4899999999964 3599999999999999999999999999999999999987 4999999999997 45566
Q ss_pred HhhcceEEecCccccCcc-cHHHhcCCC---CC--CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhH
Q 000438 1340 DLRSRFGIIPQEPVLFEG-TVRSNIDPI---GQ--YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~g-TIR~NLdp~---~~--~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
.+|++++++||+|.+|.+ |+++|+... .. .+ ++++.++++..++.+.+.. .+ .....+||+||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~----~~~~~~LS~G~ 154 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKD---RL----NDYPSNLSGGQ 154 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhh---hh----ccChhhCCHHH
Confidence 788999999999999976 999999631 11 11 2457788888887654322 12 23346799999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSR 1488 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1488 (1510)
|||++|||||+++|+||||||||++||+++.+.+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRK 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987677999999999999876 99999999999999999999
Q ss_pred HhcCC
Q 000438 1489 LLERP 1493 (1510)
Q Consensus 1489 Ll~~~ 1493 (1510)
+++++
T Consensus 235 ~~~~~ 239 (253)
T PRK14267 235 VFENP 239 (253)
T ss_pred HHhCC
Confidence 98765
No 172
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2e-39 Score=370.24 Aligned_cols=211 Identities=33% Similarity=0.470 Sum_probs=183.4
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCH---HHhhcc
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL---HDLRSR 1344 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l---~~LR~~ 1344 (1510)
|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPNG-KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCCC-cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 6899999999732 459999999999999999999999999999999999999999999999999987654 346889
Q ss_pred eEEecCccccCc-ccHHHhcCCC------------CC---CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChh
Q 000438 1345 FGIIPQEPVLFE-GTVRSNIDPI------------GQ---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVG 1408 (1510)
Q Consensus 1345 i~iIpQdp~LF~-gTIR~NLdp~------------~~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1408 (1510)
++++||++.+|. .|+++|+... +. ..++++.++++.+++.+.... ...+||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG 149 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQ-----------RADQLSGG 149 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHH
Confidence 999999998886 5999999521 01 123467778888888655433 23479999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecC
Q 000438 1409 QRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGK 1485 (1510)
Q Consensus 1409 QrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gs 1485 (1510)
||||++|||||+++|+||||||||++||+++.+.+.+.|++..+ ++|+|+|+|+++.+.+ ||+|++|++|++++.|+
T Consensus 150 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 229 (243)
T TIGR02315 150 QQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGA 229 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCC
Confidence 99999999999999999999999999999999999999998643 7899999999999876 99999999999999999
Q ss_pred hhHHh
Q 000438 1486 PSRLL 1490 (1510)
Q Consensus 1486 p~~Ll 1490 (1510)
++++.
T Consensus 230 ~~~~~ 234 (243)
T TIGR02315 230 PSELD 234 (243)
T ss_pred HHHhC
Confidence 99874
No 173
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-39 Score=373.25 Aligned_cols=216 Identities=29% Similarity=0.482 Sum_probs=190.5
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.++++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 58999999999754456999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EecCcc--ccCcccHHHhcCCC---CCCCHH----HHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1347 IIPQEP--VLFEGTVRSNIDPI---GQYSDE----EIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1347 iIpQdp--~LF~gTIR~NLdp~---~~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
|+||+| .++..|+++|+... ...+++ .+.+++++.++.++....+ .+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lar 155 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEP-----------QNLSGGQKQRVAIAS 155 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 45677999999632 123333 3567788888877665544 478999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
||+++|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+..||+|++|++|++++.|+++++.+++
T Consensus 156 al~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 233 (271)
T PRK13632 156 VLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNNK 233 (271)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcCH
Confidence 99999999999999999999999999999998653 48999999999998889999999999999999999988754
No 174
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=369.83 Aligned_cols=218 Identities=31% Similarity=0.472 Sum_probs=190.6
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCCCCHHHh
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLLGLHDL 1341 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i~l~~L 1341 (1510)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999974 3599999999999999999999999999999999999974 69999999999998888889
Q ss_pred hcceEEecCccccC-cccHHHhcCCC---CCC--C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1342 RSRFGIIPQEPVLF-EGTVRSNIDPI---GQY--S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1342 R~~i~iIpQdp~LF-~gTIR~NLdp~---~~~--s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
|++++|+||+|.+| +.|+++|+... ... . ++++.++++.+++.+.+. ..+|.. ..+|||||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~----~~~LSgG~~q 153 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK---DRLDAP----AGKLSGGQQQ 153 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh---hhhcCC----cccCCHHHHH
Confidence 99999999999755 67999999631 111 1 356788999998865432 123433 3579999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++|||||+++|+||+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 999999999999999999999999999999999999987678999999999999865 9999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
+++
T Consensus 234 ~~~ 236 (250)
T PRK14247 234 TNP 236 (250)
T ss_pred cCC
Confidence 765
No 175
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-39 Score=374.87 Aligned_cols=216 Identities=24% Similarity=0.411 Sum_probs=191.2
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
-++++|++++|+.+. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 3 ~l~~~~l~~~~~~~~-~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 3 LIETRDLCYSYSGSK-EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred eEEEEEEEEEeCCCC-ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 378999999996433 4999999999999999999999999999999999999999999999999998878888899999
Q ss_pred EecCcc--ccCcccHHHhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1347 IIPQEP--VLFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1347 iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
++||+| .+|..|+++|+.... ..+ ++.+.++++.+++.+.....| ..||+|||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 478889999996211 223 345788999999987766554 368999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCCc
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERPS 1494 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~ 1494 (1510)
||+.+|++|||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.+ ||||++|++|++++.|+++++++...
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~~~ 230 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQPD 230 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcCHH
Confidence 99999999999999999999999999999998653 7899999999999965 99999999999999999999986543
No 176
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.6e-39 Score=383.94 Aligned_cols=212 Identities=27% Similarity=0.461 Sum_probs=188.7
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.|+++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+...+. .|++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 4889999999974 359999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EecCccccCcc-cHHHhcCCC-C------CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1347 IIPQEPVLFEG-TVRSNIDPI-G------QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~-~------~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
|+||++.+|.. |+++|+... . ..+ ++++.++|+.++|.++....| ..||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----------AQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 99999999975 999999632 1 122 346778899999877665554 368999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
|||||+++|++|+|||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|+++++
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998754 6899999999999877 99999999999999999999998
Q ss_pred CC
Q 000438 1492 RP 1493 (1510)
Q Consensus 1492 ~~ 1493 (1510)
++
T Consensus 227 ~p 228 (353)
T PRK10851 227 EP 228 (353)
T ss_pred Cc
Confidence 87
No 177
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-39 Score=363.45 Aligned_cols=202 Identities=28% Similarity=0.448 Sum_probs=176.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ..+++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEEE
Confidence 478999999964 35999999999999999999999999999999999999999999999999998654 35678999
Q ss_pred ecCccccCc-ccHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFE-GTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||+|.+|. .|+++|+... ...+ ++++.++++.+++.+.....| .+||||||||++|||||
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~al 145 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYP-----------HELSGGQQQRVALARAL 145 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHHHHHHHH
Confidence 999998886 5999999631 1112 345778888888877655444 36899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
+++|+||||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999998643 7899999999999876 9999999999999875
No 178
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.6e-39 Score=364.19 Aligned_cols=212 Identities=26% Similarity=0.445 Sum_probs=179.1
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHh-hcceE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL-RSRFG 1346 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i~ 1346 (1510)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK--SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC--eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 578999999964 359999999999999999999999999999999999999999999999999988877664 67799
Q ss_pred EecCccccCcc-cHHHhcCCCCC-CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHc
Q 000438 1347 IIPQEPVLFEG-TVRSNIDPIGQ-YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVML 1420 (1510)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~~~-~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALL 1420 (1510)
|+||+|.+|.+ |+++|+..... .. .+++.++++..+ .++..++ ....+||+|||||++|||||+
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~------~l~~~~~----~~~~~LS~G~~qrv~laral~ 148 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP------RLKERRK----QLAGTLSGGEQQMLAIARALM 148 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH------hhhhhhh----CchhhCCHHHHHHHHHHHHHh
Confidence 99999999987 99999964221 11 122334444431 1112223 334579999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1421 KHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1421 r~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
++|++|+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 149 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 149 SRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred cCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999999865 47899999999999877 99999999999999999988764
No 179
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-39 Score=373.27 Aligned_cols=217 Identities=26% Similarity=0.424 Sum_probs=191.9
Q ss_pred eEEEEEEEEEecCC-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1267 NVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
-++++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743 24599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEecCcc--ccCcccHHHhcCCC---CCCCHH----HHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1346 GIIPQEP--VLFEGTVRSNIDPI---GQYSDE----EIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1346 ~iIpQdp--~LF~gTIR~NLdp~---~~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
+|+||+| .++..|+.+||... ...+++ ++.++++.+++.++....| ..||+|||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTREP-----------ARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 47788999999632 123333 4577888888877655433 36899999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCc
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPS 1494 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~ 1494 (1510)
|||+++|+||||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|++++++++.+
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 232 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFATSE 232 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHH
Confidence 999999999999999999999999999999997654 789999999999998899999999999999999999987543
No 180
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=370.22 Aligned_cols=218 Identities=26% Similarity=0.436 Sum_probs=188.5
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcc---cCC--CCcEEEEcCeeCCCC--CHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRL---VEP--SGGRIIIDGIDISLL--GLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl---~ep--~~G~I~IDG~dI~~i--~l~ 1339 (1510)
.++++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 5899999999964 3599999999999999999999999999999999997 344 589999999998764 346
Q ss_pred HhhcceEEecCccccCcccHHHhcCCC---CC-----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI---GQ-----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~-----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
.+|++++|+||+|.+|.+|+++|+... .. ..+++++++++.+++.+.+.. .....+.+||+||||
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 153 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKD-------KLKESAFALSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhh-------hhhCCcccCCHHHHH
Confidence 778899999999999999999999631 11 123467888888888654432 122345689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||+|+|+++.+.. ||||++|++|++++.|++++++
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999998778999999999999876 9999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
+++
T Consensus 234 ~~~ 236 (250)
T PRK14245 234 TNP 236 (250)
T ss_pred cCC
Confidence 765
No 181
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2.4e-39 Score=351.44 Aligned_cols=178 Identities=33% Similarity=0.583 Sum_probs=166.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++|++++|+...+++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999976434699999999999999999999999999999999999999999999999998776 6678899999
Q ss_pred ecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000438 1348 IPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1510)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILi 1427 (1510)
+||+|.+|++|+++|+ ..+||+|||||++||||++++|++|+
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 34799999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCEEEEec
Q 000438 1428 MDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1428 LDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~g 1484 (1510)
|||||++||+.+.+.+.+.|++..+++|+|+++|+++.+..||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999887789999999999999889999999999999865
No 182
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-39 Score=371.23 Aligned_cols=219 Identities=27% Similarity=0.410 Sum_probs=191.1
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-----CCCcEEEEcCeeCCC--CCH
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LGL 1338 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l 1338 (1510)
..|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 36999999999963 459999999999999999999999999999999999997 589999999999864 346
Q ss_pred HHhhcceEEecCccccCcccHHHhcCCC----CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1339 HDLRSRFGIIPQEPVLFEGTVRSNIDPI----GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
..+|++++++||+|.+|.+|+++|+... +.. .++++.++++.+++.+.+.. ........||+|||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~ 169 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKD-------DLHKSALTLSGGQQ 169 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhh-------hhcCCcccCCHHHH
Confidence 6788999999999999999999999631 111 23557788889888655432 23345568999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
||++|||||+++|++|+|||||++||+.+...+.+.|++..++.|+|+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 170 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14237 170 QRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNI 249 (267)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999876 999999999999999999999
Q ss_pred hcCC
Q 000438 1490 LERP 1493 (1510)
Q Consensus 1490 l~~~ 1493 (1510)
.+.+
T Consensus 250 ~~~~ 253 (267)
T PRK14237 250 FTNP 253 (267)
T ss_pred hcCC
Confidence 8755
No 183
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-39 Score=368.65 Aligned_cols=218 Identities=26% Similarity=0.392 Sum_probs=187.6
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccc--CC---CCcEEEEcCeeCCCC--CHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLV--EP---SGGRIIIDGIDISLL--GLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--ep---~~G~I~IDG~dI~~i--~l~ 1339 (1510)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. .| ++|+|.+||.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 4899999999974 35999999999999999999999999999999999995 36 499999999998653 345
Q ss_pred HhhcceEEecCccccCcccHHHhcCCC----CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI----GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
.+|++++++||+|.+|..|+++|+... +.. .++++.++++.+++.+.+.. .......+||+||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 155 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKD-------RLHDSALGLSGGQQQ 155 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHH-------HHhcCcccCCHHHHH
Confidence 678899999999999999999999621 111 23456778888887654332 223345679999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++|||||+++|+||||||||++||.++...+.+.|++..+++|||+|+|+++.+.. ||||++|++|++++.|++++++
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999876 9999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
+++
T Consensus 236 ~~~ 238 (252)
T PRK14239 236 MNP 238 (252)
T ss_pred hCC
Confidence 765
No 184
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-39 Score=365.65 Aligned_cols=208 Identities=26% Similarity=0.409 Sum_probs=181.6
Q ss_pred eEEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH---h
Q 000438 1267 NVDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---L 1341 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---L 1341 (1510)
-++++||+++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.++ +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997532 46999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cceEEecCccccCcc-cHHHhcCC---CCCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHH
Q 000438 1342 R-SRFGIIPQEPVLFEG-TVRSNIDP---IGQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1510)
Q Consensus 1342 R-~~i~iIpQdp~LF~g-TIR~NLdp---~~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQr 1412 (1510)
| ++++|+||+|.+|.+ |+++|+.. +.... ++++.++++..++.+.....+ .+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHRP-----------SELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHH
Confidence 3 679999999998876 99999953 11222 345788888888866544332 4689999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhhcCEEEEEeCCEEEEecC
Q 000438 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGK 1485 (1510)
Q Consensus 1413 l~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gs 1485 (1510)
++||||++++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+..+|++++|++|++++.++
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999863 4789999999999999999999999999998775
No 185
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-39 Score=350.78 Aligned_cols=220 Identities=25% Similarity=0.377 Sum_probs=185.4
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.+++++|+..|.. ..||+|+||+|++||.|+|+||||||||||++++.|+..|++|+|.+||..+... ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 5889999999986 4699999999999999999999999999999999999999999999999887433 45799
Q ss_pred EecCccccCcc-cHHHhcCCC-CC--C----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1347 IIPQEPVLFEG-TVRSNIDPI-GQ--Y----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~-~~--~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
||+|++.||.. ||++|+... .. . ..+.+.++|+++||.++-...|.. ||||||||++||||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~q-----------LSGGMrQRVaiARA 144 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPHQ-----------LSGGMRQRVAIARA 144 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCccc-----------cChHHHHHHHHHHH
Confidence 99999999998 999999632 11 1 245688999999999999888864 69999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeC--CEE---EEecChhHHh
Q 000438 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDA--GWA---KEFGKPSRLL 1490 (1510)
Q Consensus 1419 LLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~--G~i---vE~gsp~~Ll 1490 (1510)
|+.+|+||+||||.++||..|...+|+-+.+..+ ++||++|||++++... +|||+||.+ |+| ++.+-|..-.
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~~~~~i~l~rpR~ 224 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIGEELEIDLPRPRI 224 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcceeeEEecCCCCCcc
Confidence 9999999999999999999999999999988654 5899999999998766 999999999 545 3333221112
Q ss_pred cCCcHHHHHHHHHh
Q 000438 1491 ERPSLFGALVQEYA 1504 (1510)
Q Consensus 1491 ~~~~~f~~lv~~~~ 1504 (1510)
.....|..+.++-.
T Consensus 225 ~~~~~f~~l~~~i~ 238 (248)
T COG1116 225 RGDPEFLELREELL 238 (248)
T ss_pred ccChHHHHHHHHHH
Confidence 33356666665544
No 186
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=2.4e-36 Score=367.07 Aligned_cols=467 Identities=18% Similarity=0.203 Sum_probs=327.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccch------hHHHHHhhhHhHhhhhh
Q 000438 988 LFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSG------RILSRASTDQTNIDLFL 1061 (1510)
Q Consensus 988 ~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G------~ilnR~s~D~~~id~~l 1061 (1510)
..+.+|..++.+..++...+.++......+.-..|-+.++++-+... .||.-...| ..=+|+.+|+...-...
T Consensus 87 ~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~-~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t 165 (604)
T COG4178 87 QQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPR-RYYRLAQAGGIGLIDNPDQRIQEDIRNFTETT 165 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHhcccccCCCChHHhHHHHHHHHHhhH
Confidence 45678888888888888899999999999998999999999988887 444333333 23378888887775554
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhH--------------HHHHH----HHHH-HHHHHHHHHHHHHHHHHHHHHHHhhh
Q 000438 1062 PFFVGITVAMYITLLGIFIITCQYAW--------------PTIFL----VIPL-AWANYWYRGYYLSTSRELTRLDSITK 1122 (1510)
Q Consensus 1062 ~~~~~~~~~~~~~~~~~~~v~~~~~~--------------~~~~~----~ipl-~~~~~~~~~~y~~~~r~l~rl~~~~~ 1122 (1510)
-.....++.++++++...++....+- .+++. .++. .++..++.+...+-.-+..+.|+.-|
T Consensus 166 ~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR 245 (604)
T COG4178 166 LDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFR 245 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHH
Confidence 44445555555555554444431111 11111 1111 12233455555555666666666655
Q ss_pred hhhHHHHHHhhhhhHHHHHhCcHHHHHHHHHHHHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHH-HHHHHHHhccCccC
Q 000438 1123 APVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCL-ATLFMILLPSSIIK 1201 (1510)
Q Consensus 1123 sp~~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~-~~~~~v~~~~~~~~ 1201 (1510)
..+. ---+....|-.|+.|+.-.++..+..+.-...+......+.++...-...+-+.+.+ ..+.+-.+..|.++
T Consensus 246 ~~Lv----rv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~ 321 (604)
T COG4178 246 YSLV----RVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQIT 321 (604)
T ss_pred HHHH----HHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcCh
Confidence 5433 334566777788877655554444444433333333333322222222222111111 11111123357778
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhcC------cccccccccCCCCCCCCCCCceEEEEEEEE
Q 000438 1202 PENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEI------PSEAAWKMEDRLPPPNWPAHGNVDLIDLQV 1275 (1510)
Q Consensus 1202 ~g~~Gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~------~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~ 1275 (1510)
-|.+..+.+-..++...+.|++..+..+.+-...+.|+.++.+. +.|.+.... .+-...-.....|.|+|+++
T Consensus 322 ~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~nl~l 400 (604)
T COG4178 322 FGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTG-RRIDFDDNADHGITLENLSL 400 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCccc-ccccccccccceeEEeeeeE
Confidence 78877777777888899999999999999999999999999742 222111100 00000000146899999999
Q ss_pred EecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccC
Q 000438 1276 RYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLF 1355 (1510)
Q Consensus 1276 ~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF 1355 (1510)
.-+++. ..|++++|+|+|||.+-|.|+||||||||+++|.|+.+--+|+|.+-. -+++-++||.|.+-
T Consensus 401 ~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p 468 (604)
T COG4178 401 RTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLP 468 (604)
T ss_pred ECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCC
Confidence 988766 589999999999999999999999999999999999999999987641 23588999999999
Q ss_pred cccHHHhcC-CCC--CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCC
Q 000438 1356 EGTVRSNID-PIG--QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEAT 1432 (1510)
Q Consensus 1356 ~gTIR~NLd-p~~--~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaT 1432 (1510)
.||+||-|. |.. .++|+|+.++|.+|+|.+++.++.+ .+. -..-||+||||||++||.||+|||+++|||||
T Consensus 469 ~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-~~~----W~~vLS~GEqQRlafARilL~kP~~v~LDEAT 543 (604)
T COG4178 469 QGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-EDR----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEAT 543 (604)
T ss_pred CccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-cCc----HhhhcChhHHHHHHHHHHHHcCCCEEEEecch
Confidence 999999996 544 3899999999999999999998743 222 34569999999999999999999999999999
Q ss_pred CCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeC
Q 000438 1433 ASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDA 1477 (1510)
Q Consensus 1433 sslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~ 1477 (1510)
|+||++++..+.+.++++.+++|||.|+||.....-.++.+-+++
T Consensus 544 sALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 544 SALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred hccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 999999999999999999999999999999887777777666543
No 187
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=371.28 Aligned_cols=217 Identities=29% Similarity=0.436 Sum_probs=187.9
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-----CCCcEEEEcCeeCCCCC--HHH
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISLLG--LHD 1340 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~i~--l~~ 1340 (1510)
-+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999963 459999999999999999999999999999999999986 47999999999987653 346
Q ss_pred hhcceEEecCccccCcccHHHhcCCC---CC------CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1341 LRSRFGIIPQEPVLFEGTVRSNIDPI---GQ------YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1341 LR~~i~iIpQdp~LF~gTIR~NLdp~---~~------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
+|++++|+||+|.+|.+|+++|+... .. ..++++.++++..++.+.+. +.+...+.+||+||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~q 156 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQQ 156 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHHH
Confidence 78899999999999999999999631 11 12356778889988865432 1223345679999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|+|+++.+.. ||||++|++|++++.|++++++
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988678999999999999876 9999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
+++
T Consensus 237 ~~~ 239 (251)
T PRK14244 237 KNP 239 (251)
T ss_pred cCC
Confidence 876
No 188
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-39 Score=373.16 Aligned_cols=216 Identities=26% Similarity=0.442 Sum_probs=192.5
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCC---cEEEEcCeeCCCCCHHHhh
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSG---GRIIIDGIDISLLGLHDLR 1342 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~---G~I~IDG~dI~~i~l~~LR 1342 (1510)
+.|+++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999997543459999999999999999999999999999999999999998 8999999999888777889
Q ss_pred cceEEecCcc--ccCcccHHHhcCCC---CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHH
Q 000438 1343 SRFGIIPQEP--VLFEGTVRSNIDPI---GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1510)
Q Consensus 1343 ~~i~iIpQdp--~LF~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl 1413 (1510)
++++|+||+| .+++.|+++||... ...++ +++.++++.+++.++....| .+||+|||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHH
Confidence 9999999999 46788999999632 12333 44788899999987766655 36899999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhc
Q 000438 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1414 ~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
+|||||+++|++|||||||++||..+...+.+.|++..+ ++|||++||+++.+..||||++|++|++++.|+++++++
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999998753 689999999999998899999999999999999999876
Q ss_pred C
Q 000438 1492 R 1492 (1510)
Q Consensus 1492 ~ 1492 (1510)
+
T Consensus 233 ~ 233 (282)
T PRK13640 233 K 233 (282)
T ss_pred C
Confidence 4
No 189
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=9.9e-40 Score=362.94 Aligned_cols=201 Identities=30% Similarity=0.453 Sum_probs=170.6
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1510)
.++++|++|+|+ ++++|+|+||++++||+++|+|||||||||||++|+|.++|.+|+|.++| .+
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 478999999996 46899999999999999999999999999999999999999999999999 48
Q ss_pred EEEcCCCcC-CCccHHHHHhcCCCCChhh-----------HHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHH
Q 000438 711 AYVAQTSWI-QNGTIEENILFGLPMNRAK-----------YGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRI 778 (1510)
Q Consensus 711 ayv~Q~~~i-~~~Tv~enI~fg~~~~~~~-----------~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 778 (1510)
|||||.+-. +..||+|-+.+|+.-...+ ..++++.+++.+ ...+...+|||||||||
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~-----------la~r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEH-----------LADRPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHH-----------HhcCcccccChhHHHHH
Confidence 999999754 5779999999996421111 111222222221 22345568999999999
Q ss_pred HHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhh-cCCcEEEEEccCCCcc-ccCCEEEEEeCCEEEEecChHHHH
Q 000438 779 QLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGA-LKGKTIILVTHQVDFL-HNVDLILVMREGMIVQSGRYNALL 856 (1510)
Q Consensus 779 ~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l-~~~D~i~~l~~G~i~~~g~~~~l~ 856 (1510)
.|||||+|+|+++|||||||+||...+-++++.+.+.. .+|+|+|+|+||++.. ..||++++|++|+++.+|+++|++
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999998877665 4599999999999985 579999999999999999999887
Q ss_pred hc
Q 000438 857 NS 858 (1510)
Q Consensus 857 ~~ 858 (1510)
+.
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 63
No 190
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-39 Score=375.88 Aligned_cols=217 Identities=27% Similarity=0.398 Sum_probs=185.8
Q ss_pred eEEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCC----CCHH
Q 000438 1267 NVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL----LGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~----i~l~ 1339 (1510)
.++++|++++|+... .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997432 359999999999999999999999999999999999999999999999999863 3466
Q ss_pred HhhcceEEecCcc--ccCcccHHHhcCCC---CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1340 DLRSRFGIIPQEP--VLFEGTVRSNIDPI---GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp--~LF~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
..|++++|+||+| .+|+.|+++|+... ...++ +.+.++++.++|.+... +. ....||+|||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~------~~----~~~~LSgGq~ 151 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL------AR----SPFELSGGQM 151 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh------hC----CcccCCHHHH
Confidence 7888999999998 68888999999521 11233 34567788888863221 11 2346999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChh
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPS 1487 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~ 1487 (1510)
||++|||||+.+|+||||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|+++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999998643 7899999999999875 9999999999999999999
Q ss_pred HHhcCC
Q 000438 1488 RLLERP 1493 (1510)
Q Consensus 1488 ~Ll~~~ 1493 (1510)
++.+++
T Consensus 232 ~~~~~~ 237 (290)
T PRK13634 232 EIFADP 237 (290)
T ss_pred HHhcCH
Confidence 987654
No 191
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4.1e-39 Score=386.86 Aligned_cols=214 Identities=26% Similarity=0.470 Sum_probs=192.0
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.++++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+++..++|++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999974 45999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCcccc-CcccHHHhcCCC--------C---CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1347 IIPQEPVL-FEGTVRSNIDPI--------G---QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1347 iIpQdp~L-F~gTIR~NLdp~--------~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
++||++.+ |+.|+++|+... . ...++.+.++++.+++.++..+. ..+||+|||||++
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-----------~~~LSgGerQRv~ 149 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-----------VTSLSGGERQRVL 149 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHH
Confidence 99999987 678999999532 1 11245688999999998765433 2368999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
|||||+++|+||+|||||++||+.+...+.+.|++.. ++.|||+++|+++.+.. ||||++|++|++++.|+|++++..
T Consensus 150 IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 150 LARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 9999999999999999999999999999999999875 47899999999999965 999999999999999999999865
Q ss_pred C
Q 000438 1493 P 1493 (1510)
Q Consensus 1493 ~ 1493 (1510)
+
T Consensus 230 ~ 230 (402)
T PRK09536 230 D 230 (402)
T ss_pred H
Confidence 4
No 192
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-39 Score=373.78 Aligned_cols=212 Identities=28% Similarity=0.432 Sum_probs=185.5
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHh----hcc
Q 000438 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL----RSR 1344 (1510)
Q Consensus 1269 ~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L----R~~ 1344 (1510)
.++|++.+|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 45678888864 358999999999999999999999999999999999999999999999999988765543 468
Q ss_pred eEEecCccccCc-ccHHHhcCCC---CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1345 FGIIPQEPVLFE-GTVRSNIDPI---GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1345 i~iIpQdp~LF~-gTIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
++|+||+|.+|. .|+++|+... ... .++++.++++.+++.+.....|. +||+|||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYPD-----------ELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCcc-----------cCCHHHHHHHHHH
Confidence 999999999885 6999999631 111 23567889999999877766553 6899999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
|||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 252 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNP 252 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999998643 7899999999999876 9999999999999999999998766
No 193
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-39 Score=376.32 Aligned_cols=216 Identities=26% Similarity=0.340 Sum_probs=185.5
Q ss_pred eEEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCC--------
Q 000438 1267 NVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL-------- 1335 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~-------- 1335 (1510)
.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 388999999997543 259999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CCHHHhhcceEEecCcc--ccCcccHHHhcCCCC---CCC----HHHHHHHHHHcCch-HHHHh
Q 000438 1336 ----------------LGLHDLRSRFGIIPQEP--VLFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLK-DVVAA 1389 (1510)
Q Consensus 1336 ----------------i~l~~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~-~~i~~ 1389 (1510)
.+...+|++++|+||+| .+|..|+++||.... ..+ ++++.++++.++|. ++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~ 161 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQR 161 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhC
Confidence 13467889999999987 688889999996321 223 34567888888885 44333
Q ss_pred CcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh
Q 000438 1390 KPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD 1468 (1510)
Q Consensus 1390 lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~ 1468 (1510)
.| .+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+..
T Consensus 162 ~~-----------~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 162 SP-----------FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLE 230 (305)
T ss_pred Ch-----------hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHH
Confidence 32 4689999999999999999999999999999999999999999998764 47899999999998865
Q ss_pred -cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1469 -CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1469 -~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
||||++|++|++++.|+|+++.+++
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~~~~ 256 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDILSDN 256 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHhcCH
Confidence 9999999999999999999988763
No 194
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.1e-39 Score=378.89 Aligned_cols=213 Identities=28% Similarity=0.460 Sum_probs=186.4
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
..|+++|++++|.. ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.|+|.|+...+ ...|+++
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 36999999999974 45999999999999999999999999999999999999999999999999998755 4578999
Q ss_pred EEecCccccCc-ccHHHhcCCCC---CCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1346 GIIPQEPVLFE-GTVRSNIDPIG---QYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1346 ~iIpQdp~LF~-gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
||+||+|.+|. .|+++||..+. ..++ +++.++++.+++.+. .++++ .+||+|||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENK-------ADAKV----GELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchH-------hcCch----hhCCHHHHHHHHHHH
Confidence 99999999886 59999996422 1232 345677777777543 34444 369999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
||+.+|++|+|||||++||+.+.+.+++.|++.. +++|||++||+++.+.. ||||++|++|++++.|+|+++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999875 37899999999999977 999999999999999999999765
No 195
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3.8e-39 Score=384.08 Aligned_cols=217 Identities=25% Similarity=0.454 Sum_probs=192.4
Q ss_pred CceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCC--cEEEEcCeeCCCCCHHHhh
Q 000438 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSG--GRIIIDGIDISLLGLHDLR 1342 (1510)
Q Consensus 1265 ~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~--G~I~IDG~dI~~i~l~~LR 1342 (1510)
.|.|+++|++++|+. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++ |+|.+||.++...+.+ +
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~--~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH--K 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH--H
Confidence 478999999999974 359999999999999999999999999999999999999999 9999999999876653 5
Q ss_pred cceEEecCccccCcc-cHHHhcCC-C--CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1343 SRFGIIPQEPVLFEG-TVRSNIDP-I--GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1343 ~~i~iIpQdp~LF~g-TIR~NLdp-~--~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
+++++++|++.+|.. |+++|+.. . ...+ ++++.++++.++|.++..+.|. +||||||||++
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~~-----------~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLPA-----------QLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCChh-----------hCCHHHHHHHH
Confidence 689999999999976 99999962 2 1223 2457788999999887766664 58999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC---CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA---ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~---~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|||||+++|+||+||||||+||+.+...+++.|++..+ +.|+|+|||+++.+.. ||||+||++|++++.|+|+++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999987654 6899999999999876 9999999999999999999999
Q ss_pred cCC-cHH
Q 000438 1491 ERP-SLF 1496 (1510)
Q Consensus 1491 ~~~-~~f 1496 (1510)
+++ ..|
T Consensus 228 ~~p~~~~ 234 (362)
T TIGR03258 228 DAPADGF 234 (362)
T ss_pred hCcCcHH
Confidence 887 444
No 196
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=6.8e-39 Score=378.68 Aligned_cols=221 Identities=26% Similarity=0.416 Sum_probs=189.1
Q ss_pred eEEEEEEEEEecCC-----------CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCC
Q 000438 1267 NVDLIDLQVRYRSN-----------TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL 1335 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~-----------~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~ 1335 (1510)
-++++|++++|+.+ ...+++||||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 58999999999631 2459999999999999999999999999999999999999999999999999998
Q ss_pred CCHHH---hhcceEEecCcc--ccC-cccHHHhcCC----CC-CCCH----HHHHHHHHHcCchH-HHHhCcCCcccccc
Q 000438 1336 LGLHD---LRSRFGIIPQEP--VLF-EGTVRSNIDP----IG-QYSD----EEIWKSLERCQLKD-VVAAKPDKLDSLVA 1399 (1510)
Q Consensus 1336 i~l~~---LR~~i~iIpQdp--~LF-~gTIR~NLdp----~~-~~sd----~eI~~aL~~~~L~~-~i~~lp~gLdt~v~ 1399 (1510)
++.++ +|++++||||+| .+| ..||++|+.. +. ..+. +.+.++++.+++.+ ...+.
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~--------- 158 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRY--------- 158 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCC---------
Confidence 87554 678999999999 477 5799999851 21 2343 34567788888843 33332
Q ss_pred CCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEe
Q 000438 1400 DSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVD 1476 (1510)
Q Consensus 1400 e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~ 1476 (1510)
..+||||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||+
T Consensus 159 --p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~ 236 (331)
T PRK15079 159 --PHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMY 236 (331)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 246899999999999999999999999999999999999999999988643 7899999999999987 99999999
Q ss_pred CCEEEEecChhHHhcCC-cHHHH
Q 000438 1477 AGWAKEFGKPSRLLERP-SLFGA 1498 (1510)
Q Consensus 1477 ~G~ivE~gsp~~Ll~~~-~~f~~ 1498 (1510)
+|+|+|.|+++++++++ ..|.+
T Consensus 237 ~G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 237 LGHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred CCEEEEEcCHHHHHcCCCCHHHH
Confidence 99999999999999877 45544
No 197
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-39 Score=366.87 Aligned_cols=220 Identities=26% Similarity=0.437 Sum_probs=189.9
Q ss_pred CceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC--C---CCcEEEEcCeeCCCC--C
Q 000438 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE--P---SGGRIIIDGIDISLL--G 1337 (1510)
Q Consensus 1265 ~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e--p---~~G~I~IDG~dI~~i--~ 1337 (1510)
.|.|+++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 367999999999974 359999999999999999999999999999999999986 4 689999999998753 4
Q ss_pred HHHhhcceEEecCccccCc-ccHHHhcCC-C---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChh
Q 000438 1338 LHDLRSRFGIIPQEPVLFE-GTVRSNIDP-I---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVG 1408 (1510)
Q Consensus 1338 l~~LR~~i~iIpQdp~LF~-gTIR~NLdp-~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~G 1408 (1510)
...+|++++++||++.+|. .|+++|+.. + +..+ ++++.++++.+++.+.+..+ ......+||+|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDR-------LKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHH-------hhCCcCcCCHH
Confidence 4567899999999999997 599999963 1 1112 34567788888886544321 12345689999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChh
Q 000438 1409 QRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPS 1487 (1510)
Q Consensus 1409 QrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~ 1487 (1510)
||||++|||||+++|++|||||||++||..+.+.+.+.|++..++.|||++||+++.+.. ||+|++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988777899999999999976 9999999999999999999
Q ss_pred HHhcCC
Q 000438 1488 RLLERP 1493 (1510)
Q Consensus 1488 ~Ll~~~ 1493 (1510)
++..++
T Consensus 233 ~~~~~~ 238 (252)
T PRK14256 233 KIFTTP 238 (252)
T ss_pred HHHhCC
Confidence 998765
No 198
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-39 Score=369.59 Aligned_cols=218 Identities=25% Similarity=0.400 Sum_probs=187.5
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-----CCCcEEEEcCeeCCC--CCHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1339 (1510)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999964 359999999999999999999999999999999999997 479999999999864 3455
Q ss_pred HhhcceEEecCccccCcccHHHhcCCCC---CC-----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPIG---QY-----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~-----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
.+|+.++++||+|.+|++|+++|+.... .. .++++.++++.+++++.. +..++ ....+||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~----~~~~~LS~Gq~q 154 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET---KDNLD----RNAQAFSGGQQQ 154 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch---HHHhc----cChhhCCHHHHH
Confidence 6788999999999999999999996321 11 134567788888875321 11222 334589999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++|||||+++|+||||||||++||+++.+.+.+.|++..++.|||+|||+++.+.. ||||++|++|++++.|+++++.
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987677899999999999877 9999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
.++
T Consensus 235 ~~~ 237 (251)
T PRK14251 235 IAP 237 (251)
T ss_pred hCC
Confidence 765
No 199
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-39 Score=367.43 Aligned_cols=218 Identities=25% Similarity=0.440 Sum_probs=189.1
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCCC--CHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLL--GLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l~ 1339 (1510)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999973 3599999999999999999999999999999999999984 899999999998753 345
Q ss_pred HhhcceEEecCccccCcccHHHhcCCC----CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI----GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
.+|++++++||+|.+|..|+++|+... +.. .++++.++++..++.+.+.. .......+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq~q 153 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKS-------ELNKPGTRLSGGQQQ 153 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHH-------HHhCChhhcCHHHHH
Confidence 678899999999999999999999631 111 23456778888888654422 233445689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++|||||+++|+||+|||||++||..+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999999987778999999999998876 9999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
+++
T Consensus 234 ~~~ 236 (250)
T PRK14262 234 ERP 236 (250)
T ss_pred hCC
Confidence 765
No 200
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-39 Score=377.49 Aligned_cols=222 Identities=24% Similarity=0.423 Sum_probs=188.9
Q ss_pred eEEEEEEEEEecCC--------CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCH
Q 000438 1267 NVDLIDLQVRYRSN--------TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL 1338 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~--------~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l 1338 (1510)
-|+++|++++|+.. ...+|+||||+|++||++||||+||||||||+++|.|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 48999999999631 2469999999999999999999999999999999999999999999999999998875
Q ss_pred H---HhhcceEEecCccc--cCc-ccHHHhcC-CC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCC
Q 000438 1339 H---DLRSRFGIIPQEPV--LFE-GTVRSNID-PI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN 1404 (1510)
Q Consensus 1339 ~---~LR~~i~iIpQdp~--LF~-gTIR~NLd-p~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1404 (1510)
. .+|+++++|||||. |+. -||.+|+. +. ...+ .+++.++|++++|.+. .++.. ...
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~------~~~~~----p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPE------HYDRY----PHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChH------HhcCC----Ccc
Confidence 4 56789999999993 554 38888884 21 1122 3457888999998532 22332 246
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000438 1405 WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAK 1481 (1510)
Q Consensus 1405 LS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~iv 1481 (1510)
||||||||++|||||+.+|+|||+||||++||..+.+.|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999988643 7899999999999986 9999999999999
Q ss_pred EecChhHHhcCC-cHHHH
Q 000438 1482 EFGKPSRLLERP-SLFGA 1498 (1510)
Q Consensus 1482 E~gsp~~Ll~~~-~~f~~ 1498 (1510)
|.|+++++++++ ..|.+
T Consensus 235 e~g~~~~~~~~p~hpyt~ 252 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQ 252 (327)
T ss_pred EECCHHHHhcCCCCHHHH
Confidence 999999999887 44544
No 201
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.5e-39 Score=362.03 Aligned_cols=205 Identities=24% Similarity=0.454 Sum_probs=179.1
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
|+++|++++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...++|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 68999999997532 259999999999999999999999999999999999999999999999999976 456778999
Q ss_pred EEecCccccCcc-cHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
+++||+|.+|.+ |+++|+... ...+ ++++.++++..++.+..... ..+||+|||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDRR-----------VGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhh-----------hhhcCHHHHHHHHHHH
Confidence 999999999986 999999521 1122 35677888888887665443 3468999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
|++++|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999864 47899999999999876 9999999999998865
No 202
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.6e-39 Score=358.34 Aligned_cols=198 Identities=26% Similarity=0.439 Sum_probs=174.6
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEe
Q 000438 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGII 1348 (1510)
Q Consensus 1269 ~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iI 1348 (1510)
+++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999642 359999999999999999999999999999999999999999999999999864 4567889999
Q ss_pred cCcc--ccCcccHHHhcCCCC---CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000438 1349 PQEP--VLFEGTVRSNIDPIG---QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1510)
Q Consensus 1349 pQdp--~LF~gTIR~NLdp~~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1423 (1510)
||+| .+|..|+++|+.... ...++++.++++.+++.++....|. .||+|||||++|||||+++|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHPL-----------SLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCch-----------hCCHHHHHHHHHHHHHHhCC
Confidence 9998 467889999996421 1234678999999999877655543 58999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000438 1424 RLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAK 1481 (1510)
Q Consensus 1424 kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~iv 1481 (1510)
++|+|||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999863 57899999999999986 9999999999985
No 203
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-39 Score=360.98 Aligned_cols=208 Identities=27% Similarity=0.433 Sum_probs=182.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++|++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEE
Confidence 578999999964 3599999999999999999999999999999999999999999999999998763 3567889999
Q ss_pred ecCccccCcc-cHHHhcCCC---CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFEG-TVRSNIDPI---GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||+|.+|.+ |+++|+... ... .++++.++++..++.+.....| .+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLV-----------KTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999998875 999999531 111 2456788899999977654443 36899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
+.+|++|||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+.. ||||++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999998643 6899999999999876 999999999999999998874
No 204
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=4.5e-39 Score=365.40 Aligned_cols=211 Identities=25% Similarity=0.400 Sum_probs=182.9
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.+. +++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 689999999964 35999999999999999999999999999999999999999999999999998776544 458999
Q ss_pred ecCcccc-CcccHHHhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVL-FEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~L-F~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||+|.+ +..|+++|+.... ..+ ++++.++++..++.+.. .....+||+|||||++|||||
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrl~laral 147 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAERA-----------DDKVRELNGGHRRRVEIARAL 147 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------cCChhhCCHHHHHHHHHHHHH
Confidence 9999987 5679999996421 122 23456677777665432 233357999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcC
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
+++|+||||||||++||+.+.+.+.+.|++.. +++|+|+++|+++.+..||+|++|++|++++.|+++++.++
T Consensus 148 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 148 LHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999999865 37899999999999988999999999999999999999875
No 205
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-39 Score=372.32 Aligned_cols=216 Identities=28% Similarity=0.438 Sum_probs=190.7
Q ss_pred eEEEEEEEEEecCC----CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCC-HHHh
Q 000438 1267 NVDLIDLQVRYRSN----TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG-LHDL 1341 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~----~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~-l~~L 1341 (1510)
-++++|++++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 48999999999743 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hcceEEecCccc--cCcccHHHhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHH
Q 000438 1342 RSRFGIIPQEPV--LFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1510)
Q Consensus 1342 R~~i~iIpQdp~--LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQr 1412 (1510)
|++++++||+|. +|..|+++|+.... ..+ ++++.++++.++|.++..+.| .+||+|||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 67679999995321 122 456888999999988776655 3689999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHh
Q 000438 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1413 l~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
++|||||+++|++|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+..||||++|++|++++.|+|+++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999864 378999999999999889999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
++.
T Consensus 233 ~~~ 235 (280)
T PRK13633 233 KEV 235 (280)
T ss_pred cCh
Confidence 654
No 206
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-39 Score=371.68 Aligned_cols=217 Identities=23% Similarity=0.419 Sum_probs=190.0
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.++++|++++|+...+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 58999999999764445999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EecCccc--cCcccHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1347 IIPQEPV--LFEGTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1347 iIpQdp~--LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
++||+|. ++..|+++|+... ...+ ++++.++++..++.+..... ..+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lar 155 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYE-----------PNALSGGQKQRVAIAG 155 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------cccCCHHHHHHHHHHH
Confidence 9999994 4456899998532 1112 34677888888886654432 3479999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCCc
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERPS 1494 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~ 1494 (1510)
|++++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||||++|++|++++.|+++++.++..
T Consensus 156 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~ 234 (269)
T PRK13648 156 VLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDHAE 234 (269)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcCHH
Confidence 99999999999999999999999999999998653 689999999999998899999999999999999999987643
No 207
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-39 Score=367.82 Aligned_cols=218 Identities=26% Similarity=0.393 Sum_probs=187.8
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC--C---CCcEEEEcCeeCCC--CCHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE--P---SGGRIIIDGIDISL--LGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e--p---~~G~I~IDG~dI~~--i~l~ 1339 (1510)
-|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 5899999999974 359999999999999999999999999999999999987 3 58999999999864 4456
Q ss_pred HhhcceEEecCccccCcccHHHhcCCC----CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI----GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
.+|++++|+||+|.+|.+|+++|+... +..++ +++.++++..++.+.+.. .......+||+||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKD-------RLHTQALSLSGGQQQ 162 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHH
Confidence 788999999999999999999999532 11222 345667888887654321 123345679999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++|||||+++|+||+|||||++||+++...+.+.|++..+++|+|+|+|+++.+.+ ||||++|++|++++.|+|++++
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999987678899999999999876 9999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
+++
T Consensus 243 ~~~ 245 (259)
T PRK14274 243 SNP 245 (259)
T ss_pred hCC
Confidence 765
No 208
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-38 Score=365.99 Aligned_cols=218 Identities=26% Similarity=0.414 Sum_probs=189.1
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCC-----CcEEEEcCeeCCCC--CHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS-----GGRIIIDGIDISLL--GLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~-----~G~I~IDG~dI~~i--~l~ 1339 (1510)
.|+++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 5899999999964 35999999999999999999999999999999999999997 69999999998653 456
Q ss_pred HhhcceEEecCccccCcccHHHhcCCCC---C-CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPIG---Q-YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
.+|++++|+||+|.+|..|+++|+.... . .. ++.+.++++..++.+.+.. .......+||+||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKD-------NLHKSGLALSGGQQQ 154 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhh-------HhhCCcccCCHHHHH
Confidence 7889999999999999999999996321 1 11 2345667777777654432 234456789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999987 8999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
.++
T Consensus 235 ~~~ 237 (251)
T PRK14249 235 SRP 237 (251)
T ss_pred hCC
Confidence 765
No 209
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-39 Score=385.37 Aligned_cols=212 Identities=26% Similarity=0.422 Sum_probs=188.0
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.++++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999974 3599999999999999999999999999999999999999999999999999876653 56899
Q ss_pred EecCccccCcc-cHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1347 IIPQEPVLFEG-TVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
|+||++.+|.. |+++|+... ...+ ++++.++++.+++.+.....| .+||||||||++||||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLAra 147 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGRT 147 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999965 999999632 1122 346788899999877665554 3689999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1419 LLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
|+++|+||+|||||++||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p 225 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYP 225 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 9999999999999999999999999999988643 7899999999999876 9999999999999999999999876
No 210
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-39 Score=370.81 Aligned_cols=214 Identities=28% Similarity=0.444 Sum_probs=187.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCC-HHHhhcceE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG-LHDLRSRFG 1346 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~-l~~LR~~i~ 1346 (1510)
++++|++++|+.+ +.+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 6899999999643 34999999999999999999999999999999999999999999999999998765 467888999
Q ss_pred EecCccc--cCcccHHHhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1347 IIPQEPV--LFEGTVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1347 iIpQdp~--LF~gTIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
++||+|. ++..|+++|+.... ..+ ++++.++++..++.+.....| ..||+|||||++|||
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LS~G~~qrv~lar 149 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSP-----------KTLSGGQGQCVALAG 149 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCc-----------ccCCHHHHHHHHHHH
Confidence 9999985 56789999996421 122 345777888888876654433 468999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhhcCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
||+++|+||||||||++||+.+...+.+.|++.. +++|||++||+++.+..||||++|++|++++.|+++++...+
T Consensus 150 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 226 (274)
T PRK13644 150 ILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSDV 226 (274)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcCh
Confidence 9999999999999999999999999999998764 478999999999999889999999999999999999987653
No 211
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=7.5e-39 Score=367.24 Aligned_cols=213 Identities=27% Similarity=0.482 Sum_probs=186.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCC----------
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG---------- 1337 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~---------- 1337 (1510)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 578999999974 35999999999999999999999999999999999999999999999999997653
Q ss_pred ---HHHhhcceEEecCccccCc-ccHHHhcCCC----CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCC
Q 000438 1338 ---LHDLRSRFGIIPQEPVLFE-GTVRSNIDPI----GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNW 1405 (1510)
Q Consensus 1338 ---l~~LR~~i~iIpQdp~LF~-gTIR~NLdp~----~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1405 (1510)
...+|++++++||++.+|. .|+++|+... ... .++++.++++..++.+.....| ..|
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~L 147 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHMP-----------AQL 147 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcCh-----------hhc
Confidence 2467889999999999885 7999999631 111 2356778888888876655443 468
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000438 1406 SVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKE 1482 (1510)
Q Consensus 1406 S~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE 1482 (1510)
|+|||||++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.+ |||+++|++|++++
T Consensus 148 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 227 (252)
T TIGR03005 148 SGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVE 227 (252)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998653 7899999999999976 99999999999999
Q ss_pred ecChhHHhcCC
Q 000438 1483 FGKPSRLLERP 1493 (1510)
Q Consensus 1483 ~gsp~~Ll~~~ 1493 (1510)
.|+++++.+++
T Consensus 228 ~g~~~~~~~~~ 238 (252)
T TIGR03005 228 QGKPDEIFRQP 238 (252)
T ss_pred eCCHHHHhcCC
Confidence 99999998765
No 212
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.8e-39 Score=366.08 Aligned_cols=212 Identities=24% Similarity=0.393 Sum_probs=186.0
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHh-hcceE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL-RSRFG 1346 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i~ 1346 (1510)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |.+++
T Consensus 3 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 3 LYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred EEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 789999999964 359999999999999999999999999999999999999999999999999988876654 55799
Q ss_pred EecCccccCcc-cHHHhcCCCCC------------C---CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1347 IIPQEPVLFEG-TVRSNIDPIGQ------------Y---SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~~~------------~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
++||++.+|.+ |+++|++.... . .++++.++++..++.+... ....+||+|||
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Ge~ 149 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEAD-----------RLAGLLSHGQK 149 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHH
Confidence 99999999987 99999964211 0 2345677787777754432 22347999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
||++||||++++|++|+|||||++||+++.+.+.+.|++..+++|+|++||+++.+.+ ||+|++|++|++++.|+++++
T Consensus 150 qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~ 229 (242)
T TIGR03411 150 QWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQV 229 (242)
T ss_pred HHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHH
Confidence 9999999999999999999999999999999999999987667899999999999976 999999999999999999998
Q ss_pred hcC
Q 000438 1490 LER 1492 (1510)
Q Consensus 1490 l~~ 1492 (1510)
+++
T Consensus 230 ~~~ 232 (242)
T TIGR03411 230 QAD 232 (242)
T ss_pred hcC
Confidence 753
No 213
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-39 Score=368.87 Aligned_cols=218 Identities=25% Similarity=0.410 Sum_probs=188.2
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCCC--CHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLL--GLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l~ 1339 (1510)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 12 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 12 QIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 6999999999963 3599999999999999999999999999999999999985 799999999998653 345
Q ss_pred HhhcceEEecCccccCcccHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQr 1412 (1510)
.+|++++|+||+|.+|..|+++|+... ...+ ++++.++++.+++.+.+. ..++. ...+||+|||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~----~~~~LSgG~~qr 162 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS---DRLKS----PALSLSGGQQQR 162 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh---hhhcC----ChhhCCHHHHHH
Confidence 678899999999999999999999631 1222 234677888888754321 12333 345799999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1413 l~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
++|||||+++|+||+|||||++||.++...+.+.|++..+++|||+|||+++.+.+ ||||++|++|++++.|+|+++.+
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999987667999999999999976 99999999999999999999987
Q ss_pred CC
Q 000438 1492 RP 1493 (1510)
Q Consensus 1492 ~~ 1493 (1510)
++
T Consensus 243 ~~ 244 (258)
T PRK14268 243 NP 244 (258)
T ss_pred CC
Confidence 65
No 214
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=339.72 Aligned_cols=470 Identities=21% Similarity=0.280 Sum_probs=338.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhHHHHHhhhHhHhhhhhHHHHHH
Q 000438 988 LFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGI 1067 (1510)
Q Consensus 988 ~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~l~~~~~~ 1067 (1510)
.++.-|+++..+..+...+........|.+...+++.++.++++.+|+.-+++-..++++.++.+|+..|... ...+..
T Consensus 49 ~~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~-~s~lp~ 127 (546)
T COG4615 49 LVLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFA-FSRLPE 127 (546)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeeh-HhhhHH
Confidence 3444455555555566666777788889999999999999999999999999999999999999999999833 333445
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhhhHHHHHhCcHHH
Q 000438 1068 TVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTT 1147 (1510)
Q Consensus 1068 ~~~~~~~~~~~~~v~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIraf~~~~~ 1147 (1510)
+.+..+.++++.+..++.+++++.+.+..+++.++.+....+..-+-.+...++.-.++.+++-.++|.+..+..+...+
T Consensus 128 ~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~ 207 (546)
T COG4615 128 LVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAE 207 (546)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHH
Confidence 66777788889999999999988776666555554433322222222222333445688899999999999988764433
Q ss_pred HHHHHHH------HHHHHhhhHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHhccCccChhHHHHHHHHHH---HHHHH
Q 000438 1148 FYQENVN------RVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFMILLPSSIIKPENVGLSLSYGL---SLNGV 1218 (1510)
Q Consensus 1148 f~~~~~~------~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~g~~Gl~l~y~l---~l~~~ 1218 (1510)
....+.. .-+...+.......+..|-.+.+-.+...++ ...... + -.+.. .+.++++ -+-+.
T Consensus 208 ~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf----~lal~~--~-w~st~--~a~tivlvlLflr~p 278 (546)
T COG4615 208 YVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVF----WLALSL--G-WASTN--VAATIVLVLLFLRTP 278 (546)
T ss_pred HHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHH----HHHHhh--c-cchhh--HHHHHHHHHHHHhhH
Confidence 3222111 1111112222222344454433322111111 011100 0 01111 3333333 34566
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhcCcccccccccCCCCCCCCCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEE
Q 000438 1219 LFWAIYMSCFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKI 1298 (1510)
Q Consensus 1219 l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~Gekv 1298 (1510)
+..++.....+-...++..+|.++...|..+.. ....+.++| ..||++||.|.|.++. .-+..||++|+.||.|
T Consensus 279 L~s~vgilP~l~~AqvA~~kiakle~~~~~a~~--~~~q~~p~~---~~lelrnvrfay~~~~-FhvgPiNl~ikrGelv 352 (546)
T COG4615 279 LLSAVGILPTLLTAQVAFNKIAKLELAPYKADF--PRPQAFPDW---KTLELRNVRFAYQDNA-FHVGPINLTIKRGELV 352 (546)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHhhcCCccccC--CCCCcCCcc---cceeeeeeeeccCccc-ceecceeeEEecCcEE
Confidence 777788888888889999999988763332211 111222335 4799999999998775 4588999999999999
Q ss_pred EEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCcccHHHhcCCCCCCCHHHHHHHH
Q 000438 1299 GVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSL 1378 (1510)
Q Consensus 1299 gIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL 1378 (1510)
=|+|.+||||||++++|.|+|.|++|+|++||.+++.-++++.|+-++-|.-|-+||+.++ -|-+..+.+.|..-|
T Consensus 353 FliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll----~~e~~as~q~i~~~L 428 (546)
T COG4615 353 FLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL----GPEGKASPQLIEKWL 428 (546)
T ss_pred EEECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh----CCccCCChHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998765 343447788888878
Q ss_pred HHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceE
Q 000438 1379 ERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTI 1456 (1510)
Q Consensus 1379 ~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~Tv 1456 (1510)
++..+.....-..+.+ ++ -.||-|||.|+++--|++.+.+|+++||=-|.-||.=.+...+.+--.. .|+||
T Consensus 429 qrLel~~ktsl~d~~f-s~-----~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI 502 (546)
T COG4615 429 QRLELAHKTSLNDGRF-SN-----LKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTI 502 (546)
T ss_pred HHHHHhhhhcccCCcc-cc-----cccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeE
Confidence 8777665443322222 11 2589999999999999999999999999999999999998877765433 58999
Q ss_pred EEEecChhhhhhcCEEEEEeCCEEEEe
Q 000438 1457 ISIAHRIPTVMDCDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1457 I~IAHRl~ti~~~DrIlVL~~G~ivE~ 1483 (1510)
+.|+|+-+--..+||++.|++|+++|.
T Consensus 503 ~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 503 FAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred EEEecCchhhhhHHHHHHHhcCceeec
Confidence 999999999999999999999999986
No 215
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=8.2e-39 Score=367.89 Aligned_cols=217 Identities=29% Similarity=0.462 Sum_probs=188.4
Q ss_pred CceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCC-------
Q 000438 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG------- 1337 (1510)
Q Consensus 1265 ~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~------- 1337 (1510)
.+.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+.
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999974 35999999999999999999999999999999999999999999999999986431
Q ss_pred ------HHHhhcceEEecCccccCcc-cHHHhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCC
Q 000438 1338 ------LHDLRSRFGIIPQEPVLFEG-TVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSG 1402 (1510)
Q Consensus 1338 ------l~~LR~~i~iIpQdp~LF~g-TIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1402 (1510)
...+|++++|+||+|.+|.+ |+++|+... .... ++++.++++..++.+.... ...
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~----------~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQG----------KYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhh----------CCc
Confidence 34678899999999999975 999999621 1112 3467788888888765421 223
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEE
Q 000438 1403 DNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWA 1480 (1510)
Q Consensus 1403 ~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~i 1480 (1510)
..||+|||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|+|+++.+.+ ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 5799999999999999999999999999999999999999999999864 37999999999999987 999999999999
Q ss_pred EEecChhHHhcCC
Q 000438 1481 KEFGKPSRLLERP 1493 (1510)
Q Consensus 1481 vE~gsp~~Ll~~~ 1493 (1510)
++.|+++++++.+
T Consensus 231 ~~~~~~~~~~~~~ 243 (257)
T PRK10619 231 EEEGAPEQLFGNP 243 (257)
T ss_pred EEeCCHHHhhhCc
Confidence 9999999998655
No 216
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8.6e-39 Score=364.14 Aligned_cols=213 Identities=26% Similarity=0.434 Sum_probs=185.1
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCC--CHHHhhcce
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLL--GLHDLRSRF 1345 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i--~l~~LR~~i 1345 (1510)
++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999964 4599999999999999999999999999999999999999999999999999864 345678899
Q ss_pred EEecCccccCc-ccHHHhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1346 GIIPQEPVLFE-GTVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1346 ~iIpQdp~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
+|+||++.+|. .|+++|+... ...+ ++++.++++..++.+.....+ ..||+|||||++||
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LS~G~~qrv~la 148 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYP-----------SELSGGQQQRVAIA 148 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcCh-----------hhcCHHHHHHHHHH
Confidence 99999998886 5999999631 1122 234667777777765544333 46899999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
||++++|+||+|||||++||.++...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 149 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 149 RALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 99999999999999999999999999999998864 47899999999999976 9999999999999999999998765
No 217
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-39 Score=366.87 Aligned_cols=218 Identities=25% Similarity=0.411 Sum_probs=190.5
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-----CCCcEEEEcCeeCCC--CCHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1339 (1510)
.++++||+++|++ .++|+|+||+|++||++||+|++|||||||+++|+|+.+ |++|+|.+||.+++. .+..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 3789999999974 359999999999999999999999999999999999975 389999999999875 3466
Q ss_pred HhhcceEEecCccccCcccHHHhcCCC-C--C-CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI-G--Q-YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~-~--~-~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
.+|++++|+||+|.+|.+|+++|+... . . .+ ++++.++++.+++.+.+... + ...+.+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~----~~~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK---L----DKSALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH---H----hCCcccCCHHHHH
Confidence 789999999999999999999999632 1 1 12 24567789999987765422 2 3345689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|+||||||+++|+||+|||||++||..+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778999999999999887 8999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
..+
T Consensus 234 ~~~ 236 (250)
T PRK14266 234 INP 236 (250)
T ss_pred hCC
Confidence 765
No 218
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.5e-39 Score=362.03 Aligned_cols=202 Identities=31% Similarity=0.465 Sum_probs=175.4
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH----h
Q 000438 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD----L 1341 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~----L 1341 (1510)
++++|++++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999997531 45999999999999999999999999999999999999999999999999998876433 4
Q ss_pred hcceEEecCccccCcc-cHHHhcCCC---CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHH
Q 000438 1342 RSRFGIIPQEPVLFEG-TVRSNIDPI---GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1510)
Q Consensus 1342 R~~i~iIpQdp~LF~g-TIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl 1413 (1510)
|++++|+||+|.+|.+ |+++|+... ... .++++.++++..++.+.....| .+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYP-----------SELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcCh-----------hhcCHHHHHHH
Confidence 6789999999999986 999999632 111 1356778888888876554333 46899999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhhcCEEEEEeCCEE
Q 000438 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGWA 1480 (1510)
Q Consensus 1414 ~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~i 1480 (1510)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998754 7899999999999888999999999974
No 219
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-39 Score=368.16 Aligned_cols=219 Identities=25% Similarity=0.409 Sum_probs=189.4
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCC--CCH
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISL--LGL 1338 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~l 1338 (1510)
+.++++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. ...
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 46999999999964 3599999999999999999999999999999999999985 48999999999864 445
Q ss_pred HHhhcceEEecCccccCcccHHHhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1339 HDLRSRFGIIPQEPVLFEGTVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
..+|++++++||+|.+|..|+++|+... +... ++.+.++++.+++.+.+... + ......||+|||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~----~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDK---L----NKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhH---h----cCCcccCCHHHH
Confidence 6788899999999999999999999631 1112 23466788888886554322 2 234567999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEe-----CCEEEEec
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVD-----AGWAKEFG 1484 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~-----~G~ivE~g 1484 (1510)
||++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||+|||+++.+.+ ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999987777899999999999987 99999998 59999999
Q ss_pred ChhHHhcCC
Q 000438 1485 KPSRLLERP 1493 (1510)
Q Consensus 1485 sp~~Ll~~~ 1493 (1510)
+++++++++
T Consensus 237 ~~~~~~~~~ 245 (259)
T PRK14260 237 VTTQIFSNP 245 (259)
T ss_pred CHHHHhcCC
Confidence 999998765
No 220
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=9.6e-39 Score=381.90 Aligned_cols=216 Identities=25% Similarity=0.459 Sum_probs=192.5
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
..++++|++++|.. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++..++.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 35999999999964 3589999999999999999999999999999999999999999999999999877664 4689
Q ss_pred EEecCccccCcc-cHHHhcCC-CC--CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDP-IG--QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp-~~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
++++|++.+|.. ||++|+.. .. ..+ ++++.++++.+++.++....|. +||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~-----------~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKPH-----------QLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCChh-----------hCCHHHHHHHHHHH
Confidence 999999999966 99999963 21 223 3457788999999888777764 57999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC-
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP- 1493 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~- 1493 (1510)
||+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+.+.+.. ||||++|++|+|++.|+|+++++++
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998754 7899999999999876 9999999999999999999999887
Q ss_pred cHH
Q 000438 1494 SLF 1496 (1510)
Q Consensus 1494 ~~f 1496 (1510)
..|
T Consensus 238 ~~~ 240 (375)
T PRK09452 238 NLF 240 (375)
T ss_pred cHH
Confidence 444
No 221
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=369.03 Aligned_cols=218 Identities=26% Similarity=0.454 Sum_probs=187.6
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-----CCCcEEEEcCeeCCC--CCHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1339 (1510)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 5999999999964 459999999999999999999999999999999999865 789999999999865 3445
Q ss_pred HhhcceEEecCccccCcccHHHhcCCC----CC----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI----GQ----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
.+|++++|+||+|.+|.+|+++|+... .. ..++.+.++++.+++.+.+. ........+|||||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~q 171 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSLSGGQQQ 171 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccCCHHHHH
Confidence 678899999999999999999999631 11 11345777888888753321 1122345689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|||+++|+++.+.. ||||++|++|++++.|+++++.
T Consensus 172 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 172 RLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988667899999999998876 9999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
+++
T Consensus 252 ~~~ 254 (268)
T PRK14248 252 TSP 254 (268)
T ss_pred hCC
Confidence 765
No 222
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=365.65 Aligned_cols=219 Identities=29% Similarity=0.447 Sum_probs=188.9
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCC--CCH
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISL--LGL 1338 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~l 1338 (1510)
|.|+++|++++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 57999999999974 3599999999999999999999999999999999999863 69999999999875 455
Q ss_pred HHhhcceEEecCccccCcccHHHhcCCCC---C-C----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1339 HDLRSRFGIIPQEPVLFEGTVRSNIDPIG---Q-Y----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
..+|++++|+||+|.+|..|+++|+.... . . .++++.++++.+++.+.+.. .......+||+|||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKD-------RLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHH-------HHhcCCCCCCHHHH
Confidence 67899999999999999999999996311 1 1 23456777888877644321 22334567999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
||++|||||+++|+||+|||||++||+.+...+.+.|++..+++|||++||+++.+.+ ||||++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667899999999999876 999999999999999999999
Q ss_pred hcCC
Q 000438 1490 LERP 1493 (1510)
Q Consensus 1490 l~~~ 1493 (1510)
..++
T Consensus 233 ~~~~ 236 (250)
T PRK14240 233 FTNP 236 (250)
T ss_pred HhCC
Confidence 8664
No 223
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=5.8e-39 Score=357.56 Aligned_cols=202 Identities=26% Similarity=0.418 Sum_probs=179.4
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++... .++|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 578999999953 4599999999999999999999999999999999999999999999999998764 567889999
Q ss_pred ecCccccC-cccHHHhcCCC---CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000438 1348 IPQEPVLF-EGTVRSNIDPI---GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1510)
Q Consensus 1348 IpQdp~LF-~gTIR~NLdp~---~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1423 (1510)
+||++.+| ..|+++|+... ...+++++.++++..++.+.....+ ..||+|||||++||||++++|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKKV-----------KGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhhH-----------hhCCHHHHHHHHHHHHHhcCC
Confidence 99999887 57999999632 1235678899999999987654433 368999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1424 RLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1424 kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
++|+|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999764 47899999999999976 9999999999999865
No 224
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.2e-39 Score=358.12 Aligned_cols=202 Identities=29% Similarity=0.452 Sum_probs=179.1
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++|++++|+. .++++|+||+|++| ++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 i~~~~~~~~~~~--~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK--KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC--EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 578999999964 35999999999999 99999999999999999999999999999999999998776 778999999
Q ss_pred ecCccccCcc-cHHHhcCC---CCCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFEG-TVRSNIDP---IGQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp---~~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||+|.+|.+ |+++|+.. +...+ ++++.++++.+++.+.....+ .+||+|||||++|||||
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKI-----------GSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCch-----------hhCCHHHHHHHHHHHHH
Confidence 9999999986 99999863 11122 356788899999876543322 36899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
+++|++|+|||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999987777999999999999976 9999999999999865
No 225
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-39 Score=369.43 Aligned_cols=213 Identities=24% Similarity=0.395 Sum_probs=189.5
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+..++|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999964 35999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EecCccccCcc-cHHHhcCCCC-----------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1347 IIPQEPVLFEG-TVRSNIDPIG-----------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~~-----------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
++||++.++.+ |+++|+.... ...++++.++++.+++.+.....|. +||||||||++
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LSgG~~qrv~ 157 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVD-----------SLSGGERQRAW 157 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcc-----------cCCHHHHHHHH
Confidence 99999877665 9999996310 1124568889999999776555442 68999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 9999999999999999999999999999999999864 27899999999999975 99999999999999999999875
Q ss_pred C
Q 000438 1492 R 1492 (1510)
Q Consensus 1492 ~ 1492 (1510)
.
T Consensus 238 ~ 238 (265)
T PRK10575 238 G 238 (265)
T ss_pred H
Confidence 3
No 226
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=366.99 Aligned_cols=219 Identities=26% Similarity=0.456 Sum_probs=187.8
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-----CCCcEEEEcCeeCCC--CCH
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LGL 1338 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l 1338 (1510)
-.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 23 ~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 23 VVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred eEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 36999999999974 359999999999999999999999999999999999987 699999999999853 355
Q ss_pred HHhhcceEEecCccccCcccHHHhcCC---CCCCC-----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1339 HDLRSRFGIIPQEPVLFEGTVRSNIDP---IGQYS-----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~gTIR~NLdp---~~~~s-----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
..+|++++|+||+|.+|..|+++|+.. ....+ ++.+.++++..++.+.+ +......+.+||+|||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l-------~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDEL-------KDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchH-------HHHHhcCcccCCHHHH
Confidence 678899999999999999999999963 11222 22345666666554322 2223445668999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999876 999999999999999999999
Q ss_pred hcCC
Q 000438 1490 LERP 1493 (1510)
Q Consensus 1490 l~~~ 1493 (1510)
.+++
T Consensus 254 ~~~~ 257 (271)
T PRK14238 254 FSNP 257 (271)
T ss_pred HcCC
Confidence 8765
No 227
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.7e-38 Score=367.27 Aligned_cols=222 Identities=22% Similarity=0.366 Sum_probs=189.9
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHH---Hhhc
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH---DLRS 1343 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR~ 1343 (1510)
-|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5899999999963 3599999999999999999999999999999999999999999999999999876543 3578
Q ss_pred ceEEecCccccCcc-cHHHhcCC----CCCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1344 RFGIIPQEPVLFEG-TVRSNIDP----IGQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1344 ~i~iIpQdp~LF~g-TIR~NLdp----~~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
+++|+||++.+|.+ |+++|+.. ....+ ++.+.++++.+++.+.....+ .+||||||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qrv~ 153 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMP-----------SELSGGMARRAA 153 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999986 99999962 11222 235667788888765443332 368999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
|||||+++|++|||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+++++++
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998643 6899999999999977 99999999999999999999987
Q ss_pred CC-cHHHHHHH
Q 000438 1492 RP-SLFGALVQ 1501 (1510)
Q Consensus 1492 ~~-~~f~~lv~ 1501 (1510)
++ ..+..++.
T Consensus 234 ~~~~~~~~~~~ 244 (269)
T PRK11831 234 NPDPRVRQFLD 244 (269)
T ss_pred CCcHHHHHHHH
Confidence 65 34444443
No 228
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=369.05 Aligned_cols=220 Identities=26% Similarity=0.396 Sum_probs=191.6
Q ss_pred CceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCC--CC
Q 000438 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISL--LG 1337 (1510)
Q Consensus 1265 ~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~ 1337 (1510)
.+.++++|++++|.. ..+|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.|+.. .+
T Consensus 23 ~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~ 100 (272)
T PRK14236 23 QTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD 100 (272)
T ss_pred CcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC
Confidence 457999999999964 3599999999999999999999999999999999999884 89999999999875 34
Q ss_pred HHHhhcceEEecCccccCcccHHHhcCCC---CC-CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhH
Q 000438 1338 LHDLRSRFGIIPQEPVLFEGTVRSNIDPI---GQ-YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1338 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~-~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
...+|++++|+||++.+|.+|+++|+... .. .. ++++.++++.+++.+.+.. .....+.+||+||
T Consensus 101 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq 173 (272)
T PRK14236 101 VAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKD-------RLHENAFGLSGGQ 173 (272)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHH-------HhhCCcccCCHHH
Confidence 56789999999999999999999999631 11 11 3457888888888755432 2234456899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSR 1488 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1488 (1510)
|||++|||||+++|+||||||||++||+.+...+.+.|++..++.|+|++||+++.+.. ||||++|++|++++.|++++
T Consensus 174 ~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 253 (272)
T PRK14236 174 QQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDT 253 (272)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHH
Confidence 99999999999999999999999999999999999999988778899999999999876 99999999999999999999
Q ss_pred HhcCC
Q 000438 1489 LLERP 1493 (1510)
Q Consensus 1489 Ll~~~ 1493 (1510)
+.+++
T Consensus 254 ~~~~~ 258 (272)
T PRK14236 254 LFTSP 258 (272)
T ss_pred HhcCC
Confidence 98765
No 229
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.2e-38 Score=357.74 Aligned_cols=210 Identities=20% Similarity=0.342 Sum_probs=187.4
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCH----HHhhcc
Q 000438 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL----HDLRSR 1344 (1510)
Q Consensus 1269 ~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l----~~LR~~ 1344 (1510)
.+.|+.++|+++ .++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 567899999866 459999999999999999999999999999999999999999999999998876542 345678
Q ss_pred eEEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000438 1345 FGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1510)
Q Consensus 1345 i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~k 1424 (1510)
++|+||+|.+|+.|+++|+.....+++++.+++++.+++.+.+..+|.|+++.+.....+||+|||||++||||++++|+
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 160 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTN 160 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999998654456777889999999999999999999999988889999999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHH--HHHHHc-CCceEEEEecChhhhhhcCEEEEEeCCE
Q 000438 1425 LLFMDEATASVDSQTDAEIQR--IIREEF-AACTIISIAHRIPTVMDCDRVIVVDAGW 1479 (1510)
Q Consensus 1425 ILiLDEaTsslD~~Td~~Iq~--~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1510)
||||||||++||..+.+.+.+ .++... .+.|+|++||+.+.+..||+|++|++|.
T Consensus 161 illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 161 IVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred EEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999999888877 444432 3689999999999998899999999984
No 230
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-38 Score=368.59 Aligned_cols=219 Identities=25% Similarity=0.428 Sum_probs=189.2
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-----CCCcEEEEcCeeCCC--CCH
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LGL 1338 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l 1338 (1510)
..|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 38 ~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 35899999999974 359999999999999999999999999999999999997 689999999999865 345
Q ss_pred HHhhcceEEecCccccCcccHHHhcCCC---CC---CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHH
Q 000438 1339 HDLRSRFGIIPQEPVLFEGTVRSNIDPI---GQ---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1510)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQr 1412 (1510)
..+|++++|+||+|.+|.+|+++|+... .. ..+++++++++..++.+.+.. .......+||+|||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LSgGe~qr 188 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKD-------QLDSSGLDLSGGQQQR 188 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHH-------HHhCCcccCCHHHHHH
Confidence 6788999999999999989999999631 11 124578888999888644322 1223345799999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEE-EEeCCEEEEecChhHHh
Q 000438 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVI-VVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1413 l~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIl-VL~~G~ivE~gsp~~Ll 1490 (1510)
++|||||+++|+||||||||++||.++.+.+.+.|++..+++|||+++|+++.+.. |||++ +|++|+|++.|+++++.
T Consensus 189 v~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 189 LCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999998777899999999999887 99975 57999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
+++
T Consensus 269 ~~~ 271 (285)
T PRK14254 269 ENP 271 (285)
T ss_pred hCc
Confidence 765
No 231
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=7.3e-39 Score=362.93 Aligned_cols=212 Identities=28% Similarity=0.496 Sum_probs=182.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHh-hcceE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL-RSRFG 1346 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i~ 1346 (1510)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 578999999964 359999999999999999999999999999999999999999999999999988776654 56899
Q ss_pred EecCccccCcc-cHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1347 IIPQEPVLFEG-TVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
++||+|.+|.+ |+++|+... .... ++++.++++..++.+... ....+||+|||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la~a 147 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRK-----------SKASSLSGGERRRVEIARA 147 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHHHHHHHH
Confidence 99999999987 999999631 1122 234556666666654332 2335799999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1419 LLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
|+++|++|||||||++||.++.+.+.+.|++.. +++|+|+++|+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 148 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 223 (232)
T cd03218 148 LATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAAN 223 (232)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhcC
Confidence 999999999999999999999999999998764 47899999999998876 999999999999999999998754
No 232
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-38 Score=365.93 Aligned_cols=218 Identities=28% Similarity=0.457 Sum_probs=189.2
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-----CCCcEEEEcCeeCCC--CCHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISL--LGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1339 (1510)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGS--FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECC--EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 5899999999964 359999999999999999999999999999999999986 479999999999853 4556
Q ss_pred HhhcceEEecCccccCcccHHHhcCCCC---CC---CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPIG---QY---SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl 1413 (1510)
.+|++++++||+|.+|..|+++|+.... .. .++++.++++.+++.+.+... ......+||+|||||+
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDK-------LKQSGLSLSGGQQQRL 160 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHH-------hcCCcccCCHHHHHHH
Confidence 7888999999999999889999996421 11 234566778888887655321 2334568999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEe---------CCEEEEe
Q 000438 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVD---------AGWAKEF 1483 (1510)
Q Consensus 1414 ~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~---------~G~ivE~ 1483 (1510)
+|||||+++|+||||||||++||+++...+.+.|++..+++|||+++|+++.+.. ||||++|+ +|++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~ 240 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEF 240 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999987777899999999999876 99999998 8999999
Q ss_pred cChhHHhcCC
Q 000438 1484 GKPSRLLERP 1493 (1510)
Q Consensus 1484 gsp~~Ll~~~ 1493 (1510)
|+++++.+++
T Consensus 241 ~~~~~~~~~~ 250 (264)
T PRK14243 241 DRTEKIFNSP 250 (264)
T ss_pred CCHHHHHhCC
Confidence 9999998766
No 233
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.9e-38 Score=366.29 Aligned_cols=221 Identities=28% Similarity=0.407 Sum_probs=187.1
Q ss_pred EEEEEEEEEecCC-------CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH
Q 000438 1268 VDLIDLQVRYRSN-------TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD 1340 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~-------~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~ 1340 (1510)
|+++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.++
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999642 346999999999999999999999999999999999999999999999999998876544
Q ss_pred ---hhcceEEecCccc--cC-cccHHHhcCC----CCC----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCC
Q 000438 1341 ---LRSRFGIIPQEPV--LF-EGTVRSNIDP----IGQ----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWS 1406 (1510)
Q Consensus 1341 ---LR~~i~iIpQdp~--LF-~gTIR~NLdp----~~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1406 (1510)
+|++++++||+|. ++ ..|+++|+.. ... ..++++.++++..++.+.. +| ....+||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~------~~----~~~~~LS 152 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSED------AD----KLPRQLS 152 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh------hh----CChhhCC
Confidence 6788999999983 44 4699999841 111 1235677888888775321 11 2335799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000438 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1407 ~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1483 (1510)
+|||||++|||||+.+|+||||||||++||+++...+.+.|++..+ +.|||+|+|+++.+.. ||+|++|++|++++.
T Consensus 153 gGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 232 (265)
T TIGR02769 153 GGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEE 232 (265)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEE
Confidence 9999999999999999999999999999999999999999998653 7899999999999986 999999999999999
Q ss_pred cChhHHhcCCcHHHH
Q 000438 1484 GKPSRLLERPSLFGA 1498 (1510)
Q Consensus 1484 gsp~~Ll~~~~~f~~ 1498 (1510)
|++++++..+..|.+
T Consensus 233 g~~~~~~~~~~~~~~ 247 (265)
T TIGR02769 233 CDVAQLLSFKHPAGR 247 (265)
T ss_pred CCHHHHcCCCCHHHH
Confidence 999999875554444
No 234
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.2e-38 Score=358.40 Aligned_cols=203 Identities=29% Similarity=0.468 Sum_probs=175.9
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHh---h
Q 000438 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL---R 1342 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L---R 1342 (1510)
++++|++++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+. |
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996432 359999999999999999999999999999999999999999999999999988876543 4
Q ss_pred -cceEEecCccccCc-ccHHHhcCC---CCCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHH
Q 000438 1343 -SRFGIIPQEPVLFE-GTVRSNIDP---IGQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1510)
Q Consensus 1343 -~~i~iIpQdp~LF~-gTIR~NLdp---~~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl 1413 (1510)
++++|+||+|.+|. .|+++|+.. ....+ ++++.++++..++.+.....| ..||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRP-----------SELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHH
Confidence 67999999999985 599999963 11222 345677888888765544433 46899999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhhcCEEEEEeCCEEE
Q 000438 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMDCDRVIVVDAGWAK 1481 (1510)
Q Consensus 1414 ~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~~DrIlVL~~G~iv 1481 (1510)
+|||||+++|+||||||||++||+++...+.+.|++.. .++|+|+|+|+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999764 378999999999999889999999999986
No 235
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-38 Score=364.61 Aligned_cols=218 Identities=25% Similarity=0.387 Sum_probs=188.8
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCCC--CHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLL--GLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l~ 1339 (1510)
.++++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999974 3599999999999999999999999999999999999875 799999999999653 345
Q ss_pred HhhcceEEecCccccCcccHHHhcCCCC---CC-C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPIG---QY-S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~~-s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
.+|++++|+||+|.+|..|+++|+.... .. + ++++.++++.+++.+.+... .......||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~q 154 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDD-------LKKSALKLSGGQQQ 154 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhH-------hhCCcccCCHHHHH
Confidence 6788999999999999999999996321 11 1 24567888888886543321 22345579999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++||||++++|+||||||||++||+.+...+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|++++++
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987777899999999999877 9999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
.++
T Consensus 235 ~~~ 237 (251)
T PRK14270 235 LEP 237 (251)
T ss_pred cCC
Confidence 764
No 236
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.6e-38 Score=364.31 Aligned_cols=221 Identities=26% Similarity=0.412 Sum_probs=187.2
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCC--------H
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG--------L 1338 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~--------l 1338 (1510)
-++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 3899999999964 35999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHhhcceEEecCccccCc-ccHHHhcCC----CCCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhH
Q 000438 1339 HDLRSRFGIIPQEPVLFE-GTVRSNIDP----IGQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~-gTIR~NLdp----~~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
..+|++++++||+|.+|. .|+++|+.. ..... ++.+.++++..++.+... ....+||+||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKET-----------SYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhh-----------CChhhCChHH
Confidence 467889999999999885 699999963 11222 234666777777754332 2345799999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChh
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPS 1487 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~ 1487 (1510)
|||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|+++
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 229 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAK 229 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998865 37899999999999976 9999999999999999999
Q ss_pred HHhcCC--cHHHHHH
Q 000438 1488 RLLERP--SLFGALV 1500 (1510)
Q Consensus 1488 ~Ll~~~--~~f~~lv 1500 (1510)
++++.+ ...+.++
T Consensus 230 ~~~~~~~~~~~~~~~ 244 (250)
T PRK11264 230 ALFADPQQPRTRQFL 244 (250)
T ss_pred HHhcCCCCHHHHHHH
Confidence 998754 3334444
No 237
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=366.67 Aligned_cols=223 Identities=25% Similarity=0.407 Sum_probs=192.9
Q ss_pred CCCCceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCC--
Q 000438 1262 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDIS-- 1334 (1510)
Q Consensus 1262 wp~~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~-- 1334 (1510)
-|..+.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 11 ~~~~~~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~ 88 (265)
T PRK14252 11 SPTQQKSEVNKLNFYYGG--YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNIL 88 (265)
T ss_pred cCCCceEEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccc
Confidence 356788999999999974 3599999999999999999999999999999999999875 7999999998874
Q ss_pred --CCCHHHhhcceEEecCccccCcccHHHhcCCC----C----CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCC
Q 000438 1335 --LLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI----G----QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN 1404 (1510)
Q Consensus 1335 --~i~l~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~----~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1404 (1510)
....+.+|++++|+||+|.+|.+|+++|+... + +..++++.++++.+++.+.+. ........+
T Consensus 89 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~ 161 (265)
T PRK14252 89 SPEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVK-------DRLGDLAFN 161 (265)
T ss_pred ccccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhh-------HHHhCCccc
Confidence 33456788999999999999999999999632 1 122467788888888764332 223344568
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000438 1405 WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1405 LS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1483 (1510)
||+|||||++|||||+++|+||+|||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.
T Consensus 162 LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~ 241 (265)
T PRK14252 162 LSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEF 241 (265)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999999987767899999999999976 999999999999999
Q ss_pred cChhHHhcCC
Q 000438 1484 GKPSRLLERP 1493 (1510)
Q Consensus 1484 gsp~~Ll~~~ 1493 (1510)
|+++++..++
T Consensus 242 g~~~~~~~~~ 251 (265)
T PRK14252 242 GATDTIFIKP 251 (265)
T ss_pred CCHHHHHhCC
Confidence 9999998654
No 238
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-39 Score=359.55 Aligned_cols=203 Identities=26% Similarity=0.373 Sum_probs=177.5
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999997421 469999999999999999999999999999999999999999999999999863 46789
Q ss_pred EEecCccccCc-ccHHHhcCCC---CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1346 GIIPQEPVLFE-GTVRSNIDPI---GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1346 ~iIpQdp~LF~-gTIR~NLdp~---~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
+++||+|.+|. .|+++|+... ... .++++.+++++.++.+.....+ .+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----------HQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 99999999987 6999999631 111 2456788999999877665554 368999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEe--CCEEEEecCh
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVD--AGWAKEFGKP 1486 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~--~G~ivE~gsp 1486 (1510)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+.+ ||+|++|+ +|+++|.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999864 37899999999998876 99999999 7999998764
No 239
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=365.92 Aligned_cols=212 Identities=26% Similarity=0.491 Sum_probs=188.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..++|+.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999964 359999999999999999999999999999999999999999999999999988888888889999
Q ss_pred ecCccccCcc-cHHHhcCCC--------CC---CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHH
Q 000438 1348 IPQEPVLFEG-TVRSNIDPI--------GQ---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCL 1415 (1510)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~--------~~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~L 1415 (1510)
+||++.+|.+ |+++|++.. +. ..++++.++++.+++.+.....+ ..||+|||||++|
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~l 149 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----------TDLSGGQRQRAFL 149 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----------ccCCHHHHHHHHH
Confidence 9999998877 999999742 11 12346788888888876554432 4689999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1416 GRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1416 ARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
|||++++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 150 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 228 (255)
T PRK11231 150 AMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP 228 (255)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH
Confidence 999999999999999999999999999999998864 47899999999999876 999999999999999999998753
No 240
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=8.4e-39 Score=325.64 Aligned_cols=209 Identities=26% Similarity=0.424 Sum_probs=186.2
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|.+++|.+.|.. .+. .++++|++||+|||+|+||||||||++++.|+..|.+|+|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~-~~~---~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGH-LPM---RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCc-ceE---EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 567889999974 332 46899999999999999999999999999999999999999999998877664 456999
Q ss_pred ecCccccCcc-cHHHhcCC----CC---CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFEG-TVRSNIDP----IG---QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp----~~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+.||..||.- ||++|+.. .- ....+.+..|+.++||.++..++|+. ||||||||++|||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~~-----------LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPGE-----------LSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCccc-----------cCchHHHHHHHHHHH
Confidence 9999999965 99999963 22 23356799999999999999999964 699999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
+|+.+||+||||.|+||+.-.+.+...+.+.. ++.|+++|||.++.+.. +||++++++|||++.|+-+++++.+
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 99999999999999999999999888887754 46799999999999877 9999999999999999999999876
No 241
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=370.31 Aligned_cols=217 Identities=25% Similarity=0.393 Sum_probs=184.4
Q ss_pred eEEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCC----CHH
Q 000438 1267 NVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLL----GLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~ 1339 (1510)
.++++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 378999999997432 3599999999999999999999999999999999999999999999999998764 356
Q ss_pred HhhcceEEecCcc--ccCcccHHHhcCCC---CCCCHH----HHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1340 DLRSRFGIIPQEP--VLFEGTVRSNIDPI---GQYSDE----EIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp--~LF~gTIR~NLdp~---~~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
.+|++++|+||+| .+|+.|+++|+... ...+++ .+.++++..++.+.. + .....+||+|||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~----~~~~~~LSgG~~ 151 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESL------F----EKNPFELSGGQM 151 (280)
T ss_pred HHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhh------h----hCCcccCCHHHH
Confidence 7888999999998 68889999999631 122333 345666777775321 1 222357999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSR 1488 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1488 (1510)
||++|||||+++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (280)
T PRK13649 152 RRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKD 231 (280)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999864 37899999999999876 99999999999999999999
Q ss_pred HhcCC
Q 000438 1489 LLERP 1493 (1510)
Q Consensus 1489 Ll~~~ 1493 (1510)
++++.
T Consensus 232 ~~~~~ 236 (280)
T PRK13649 232 IFQDV 236 (280)
T ss_pred HhcCH
Confidence 87753
No 242
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=362.35 Aligned_cols=214 Identities=29% Similarity=0.392 Sum_probs=184.3
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCC------CCCHHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDIS------LLGLHD 1340 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~------~i~l~~ 1340 (1510)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ......
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 2 SIQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 3789999999964 35999999999999999999999999999999999999999999999999874 123456
Q ss_pred hhcceEEecCccccCcc-cHHHhcCC--C--CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1341 LRSRFGIIPQEPVLFEG-TVRSNIDP--I--GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1341 LR~~i~iIpQdp~LF~g-TIR~NLdp--~--~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
+|++++|+||+|.+|.+ |+++|+.. . .... .+++.++++..++.++....| .+||+||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFP-----------LHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHH
Confidence 78899999999999975 99999952 1 1122 234666777777766555443 468999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
|++||||++++|+||||||||++||+++...+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++++.|+++++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999999864 37899999999999976 999999999999999999988
Q ss_pred hcCC
Q 000438 1490 LERP 1493 (1510)
Q Consensus 1490 l~~~ 1493 (1510)
.+.+
T Consensus 229 ~~~~ 232 (242)
T PRK11124 229 TQPQ 232 (242)
T ss_pred cCcc
Confidence 6543
No 243
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=371.65 Aligned_cols=218 Identities=25% Similarity=0.369 Sum_probs=184.0
Q ss_pred CceEEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCC----C-
Q 000438 1265 HGNVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL----L- 1336 (1510)
Q Consensus 1265 ~g~I~f~~vs~~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~----i- 1336 (1510)
.|.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 47899999999997532 259999999999999999999999999999999999999999999999999852 2
Q ss_pred CHHHhhcceEEecCcc--ccCcccHHHhcCCCC---CCCHH----HHHHHHHHcCch-HHHHhCcCCccccccCCCCCCC
Q 000438 1337 GLHDLRSRFGIIPQEP--VLFEGTVRSNIDPIG---QYSDE----EIWKSLERCQLK-DVVAAKPDKLDSLVADSGDNWS 1406 (1510)
Q Consensus 1337 ~l~~LR~~i~iIpQdp--~LF~gTIR~NLdp~~---~~sd~----eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLS 1406 (1510)
+...+|++++|+||+| .+|..|+++|+.... ..+.+ .+.++++..++. +.. .....+||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~-----------~~~~~~LS 152 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYV-----------KRSPFELS 152 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHh-----------cCChhhCC
Confidence 4567888999999998 477889999996311 12332 344566666652 222 22345799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000438 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1407 ~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1483 (1510)
+|||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.
T Consensus 153 ~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~ 232 (289)
T PRK13645 153 GGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISI 232 (289)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999998653 7899999999999865 999999999999999
Q ss_pred cChhHHhcCC
Q 000438 1484 GKPSRLLERP 1493 (1510)
Q Consensus 1484 gsp~~Ll~~~ 1493 (1510)
|+++++++++
T Consensus 233 g~~~~~~~~~ 242 (289)
T PRK13645 233 GSPFEIFSNQ 242 (289)
T ss_pred CCHHHHhcCH
Confidence 9999987654
No 244
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.1e-39 Score=369.72 Aligned_cols=202 Identities=34% Similarity=0.462 Sum_probs=172.6
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EEE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TAY 712 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------iay 712 (1510)
.|+++|++++|++. .+++|+||+|++||+++++|||||||||||++|+|+.+|++|+|.++|+ +|+
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iam 79 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAM 79 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEE
Confidence 58999999999631 2999999999999999999999999999999999999999999999984 899
Q ss_pred EcCCCcC-CCccHHHHHhcCCCCCh-------hhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHH
Q 000438 713 VAQTSWI-QNGTIEENILFGLPMNR-------AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1510)
Q Consensus 713 v~Q~~~i-~~~Tv~enI~fg~~~~~-------~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal 784 (1510)
|+|+.-+ +.+||+|||.||..... ++.+++.+...+.. .+..++.+||||||||||||||+
T Consensus 80 VFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~-----------lL~r~P~~LSGGQrQRVAlaRAl 148 (338)
T COG3839 80 VFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEH-----------LLNRKPLQLSGGQRQRVALARAL 148 (338)
T ss_pred EeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChh-----------HHhcCcccCChhhHHHHHHHHHH
Confidence 9999765 57899999999987542 22233333333333 34567889999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHhcC
Q 000438 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNSG 859 (1510)
Q Consensus 785 ~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~~ 859 (1510)
..+|+++|||||+|+||++.+..+-.++.+...+ |.|+|+||||..++. -+|||++|++|+|.+.|++.|+.+..
T Consensus 149 Vr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 149 VRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred hcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 9999999999999999999999888777664443 789999999988765 59999999999999999999998653
No 245
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=8.6e-39 Score=357.57 Aligned_cols=202 Identities=28% Similarity=0.456 Sum_probs=176.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ++++++
T Consensus 1 i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN--VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECC--eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 578999999974 3599999999999999999999999999999999999999999999999999766543 568999
Q ss_pred ecCccccCc-ccHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFE-GTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||++.+|. .|+++|+... ...+ ++++.++++..++.+.....| .+||+|||||++|||||
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~laral 145 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKP-----------KQLSGGQRQRVALGRAI 145 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 999999885 5999999642 1122 345677888888877655444 36899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
+++|+||+|||||++||+++.+.+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|+++++|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999864 37899999999999887 9999999999999986
No 246
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-38 Score=374.02 Aligned_cols=224 Identities=22% Similarity=0.334 Sum_probs=186.2
Q ss_pred eEEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC----CCCcEEEEcCeeCCCCCHHH
Q 000438 1267 NVDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE----PSGGRIIIDGIDISLLGLHD 1340 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e----p~~G~I~IDG~dI~~i~l~~ 1340 (1510)
-++++|+++.|+... ..+|+||||+|++||.+||||+||||||||+++|.|+++ |++|+|.+||.|+.+++.++
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 479999999997532 359999999999999999999999999999999999997 48999999999999998776
Q ss_pred hhc----ceEEecCccc--cCc-ccHHHhc----CCCCCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCC
Q 000438 1341 LRS----RFGIIPQEPV--LFE-GTVRSNI----DPIGQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNW 1405 (1510)
Q Consensus 1341 LR~----~i~iIpQdp~--LF~-gTIR~NL----dp~~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1405 (1510)
+|+ +|++|||+|. ++. -|+.+|+ ...... .++++.++|++++|.+.... ......+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~--------l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASR--------LDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH--------HhCCchhC
Confidence 654 6999999995 443 2555544 322111 23567889999998653211 11233479
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000438 1406 SVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKE 1482 (1510)
Q Consensus 1406 S~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE 1482 (1510)
|||||||++|||||+.+|+|||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998653 7899999999999965 99999999999999
Q ss_pred ecChhHHhcCC-cHHHH
Q 000438 1483 FGKPSRLLERP-SLFGA 1498 (1510)
Q Consensus 1483 ~gsp~~Ll~~~-~~f~~ 1498 (1510)
.|+++++++++ ..|.+
T Consensus 235 ~g~~~~~~~~p~hpyt~ 251 (326)
T PRK11022 235 TGKAHDIFRAPRHPYTQ 251 (326)
T ss_pred ECCHHHHhhCCCChHHH
Confidence 99999999887 44443
No 247
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=360.90 Aligned_cols=213 Identities=24% Similarity=0.368 Sum_probs=180.9
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH-hhcce
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD-LRSRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i 1345 (1510)
-++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+..+ .|+++
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999998887654 67889
Q ss_pred EEecCccccCcc-cHHHhcCCCCC-CC----HHHHHHHHHHc-CchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDPIGQ-YS----DEEIWKSLERC-QLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~~-~s----d~eI~~aL~~~-~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
+++||++.+|.+ |+++|+..... .+ ++++.++++.. ++.+. .......||+|||||++||||
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~a 151 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHER-----------RIQRAGTMSGGEQQMLAIGRA 151 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHHH-----------HhCchhhCCHHHHHHHHHHHH
Confidence 999999999985 99999964211 12 22334444443 23222 122345799999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1419 LLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
++++|+||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||||++|++|++++.|+++++.++
T Consensus 152 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 152 LMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred HHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 999999999999999999999999999998764 47899999999998766 999999999999999999999764
No 248
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.6e-39 Score=357.44 Aligned_cols=200 Identities=31% Similarity=0.516 Sum_probs=174.9
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEe
Q 000438 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGII 1348 (1510)
Q Consensus 1269 ~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iI 1348 (1510)
+++|++++|+.+...+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 46899999975334599999999999999999999999999999999999999999999999999888888889999999
Q ss_pred cCcc--ccCcccHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1349 PQEP--VLFEGTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1349 pQdp--~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
||+| .++..|+++|+... ...+ ++++.++++..++.+.....+ .+||||||||++|||||
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~laral 149 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSP-----------FTLSGGQKQRVAIAGVL 149 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9998 36788999999632 1122 345677888888876554433 46899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-CceEEEEecChhhhhh-cCEEEEEeCCE
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-ACTIISIAHRIPTVMD-CDRVIVVDAGW 1479 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~-~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1510)
+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|+
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 150 AMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999988653 7899999999999988 99999999985
No 249
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.6e-39 Score=370.79 Aligned_cols=216 Identities=25% Similarity=0.468 Sum_probs=194.9
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
..|+++||+.+|. ...+++|+|++|++||.+.++|||||||||++++|.||..|++|+|.|||.||..++++ ++.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 4699999999998 34699999999999999999999999999999999999999999999999999998887 4679
Q ss_pred EEecCccccCcc-cHHHhcCCC-C---CCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDPI-G---QYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~-~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
++|+|+..||.- ||++|+... . ...+ +.+.++|+.++|.++-.+.|.. |||||+||++||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~q-----------LSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPHQ-----------LSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChhh-----------hChHHHHHHHHH
Confidence 999999999954 999999632 1 1233 3688999999999998888864 699999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
|||..+|++|+||||-|+||.+-...+|.-|++.. .+.|.|.|||+-++... +|||.||++|+|...|+|+|+..+|
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999999998888754 37899999999988765 9999999999999999999999998
Q ss_pred -cHH
Q 000438 1494 -SLF 1496 (1510)
Q Consensus 1494 -~~f 1496 (1510)
+.|
T Consensus 229 ~~~f 232 (352)
T COG3842 229 ATRF 232 (352)
T ss_pred chHH
Confidence 655
No 250
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=9.6e-39 Score=357.46 Aligned_cols=201 Identities=28% Similarity=0.424 Sum_probs=175.8
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCH---HHhhcc
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL---HDLRSR 1344 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l---~~LR~~ 1344 (1510)
++++|++++|+.+ +.+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 459999999999999999999999999999999999999999999999999987754 347889
Q ss_pred eEEecCccccCcc-cHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1345 FGIIPQEPVLFEG-TVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1345 i~iIpQdp~LF~g-TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
++++||+|.+|.+ |+++|+... ...+ ++++.++++.+++.+.....| .+||+|||||++||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la 148 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP-----------AELSGGEQQRVAIA 148 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhcCHHHHHHHHHH
Confidence 9999999999975 999999632 1122 346788899988876655443 36899999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEE
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWA 1480 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~i 1480 (1510)
|||+++|+||||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 149 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 149 RAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999863 47899999999999987 999999999974
No 251
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-39 Score=354.45 Aligned_cols=201 Identities=30% Similarity=0.471 Sum_probs=168.5
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1510)
.|++++.++.|+ ..++++||+++|+.||++|+.|||||||||||++|+|+..|++|.|.++|+
T Consensus 2 ~i~i~~~~~~~~---~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~ 78 (345)
T COG1118 2 SIRINNVKKRFG---AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRK 78 (345)
T ss_pred ceeehhhhhhcc---cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcc
Confidence 477888888886 357899999999999999999999999999999999999999999999984
Q ss_pred EEEEcCCCcCC-CccHHHHHhcCCCCChh---------hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHH
Q 000438 710 TAYVAQTSWIQ-NGTIEENILFGLPMNRA---------KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 779 (1510)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~~~~~---------~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 779 (1510)
||||+|+.-+| .+||.|||.||.+.... +..+.++.|.|+. .+ ...+.+||||||||||
T Consensus 79 VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~------la-----~ryP~QLSGGQrQRVA 147 (345)
T COG1118 79 VGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEG------LA-----DRYPAQLSGGQRQRVA 147 (345)
T ss_pred eeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccc------hh-----hcCchhcChHHHHHHH
Confidence 79999997654 78999999999854311 1222233332221 12 2567899999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcc-ccCCEEEEEeCCEEEEecChHHHHh
Q 000438 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFL-HNVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 780 LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l-~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|||||..+|+++||||||+|||++.++.+-..+.+...+ |.|+++||||.++. +.||||++|++|+|.+.|+++|+..
T Consensus 148 LARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~ 227 (345)
T COG1118 148 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYD 227 (345)
T ss_pred HHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhc
Confidence 999999999999999999999999999886554444444 89999999999986 5699999999999999999999976
Q ss_pred c
Q 000438 858 S 858 (1510)
Q Consensus 858 ~ 858 (1510)
.
T Consensus 228 ~ 228 (345)
T COG1118 228 H 228 (345)
T ss_pred C
Confidence 4
No 252
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-38 Score=365.11 Aligned_cols=220 Identities=27% Similarity=0.413 Sum_probs=189.8
Q ss_pred CceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCC--CC
Q 000438 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISL--LG 1337 (1510)
Q Consensus 1265 ~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~ 1337 (1510)
.-.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 18 ~~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 18 HSVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred CceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 346999999999974 3599999999999999999999999999999999999863 69999999999864 34
Q ss_pred HHHhhcceEEecCccccCcccHHHhcCCCC---C---CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1338 LHDLRSRFGIIPQEPVLFEGTVRSNIDPIG---Q---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1338 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
...+|++++|+||++.+|.+|+++|+.... . ..++++.++++.+++.+.+.. .+ ......||+||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~---~~----~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD---KL----KEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH---Hh----cCCcccCCHHHHH
Confidence 456789999999999999889999996321 1 124556778888888655432 12 2334679999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEe---------CCEEE
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVD---------AGWAK 1481 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~---------~G~iv 1481 (1510)
|++|||||+++|+||||||||++||..+...+.+.|++..+++|||+|+|+++.+.. ||||++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999988778999999999999976 99999997 89999
Q ss_pred EecChhHHhcCC
Q 000438 1482 EFGKPSRLLERP 1493 (1510)
Q Consensus 1482 E~gsp~~Ll~~~ 1493 (1510)
+.|+++++.+++
T Consensus 249 ~~g~~~~~~~~~ 260 (274)
T PRK14265 249 EFSPTEQMFGSP 260 (274)
T ss_pred EeCCHHHHHhCC
Confidence 999999998765
No 253
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=9.5e-39 Score=357.48 Aligned_cols=200 Identities=27% Similarity=0.442 Sum_probs=176.4
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHH---Hhhcc
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH---DLRSR 1344 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR~~ 1344 (1510)
++++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+..++.. .+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 6899999999533 4599999999999999999999999999999999999999999999999999887643 46789
Q ss_pred eEEecCccccCc-ccHHHhcCCC----C---CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1345 FGIIPQEPVLFE-GTVRSNIDPI----G---QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1345 i~iIpQdp~LF~-gTIR~NLdp~----~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
++|+||+|.+|. .|+++|+... + ...+++++++++..++.+.....| .+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~la 149 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAIA 149 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999986 5999999631 1 112457889999999987655544 36899999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCE
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGW 1479 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1510)
|||+++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|+
T Consensus 150 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 150 RAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999864 47899999999999987 99999999985
No 254
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=368.71 Aligned_cols=215 Identities=29% Similarity=0.458 Sum_probs=184.2
Q ss_pred eEEEEEEEEEecCCC---CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCC----CHH
Q 000438 1267 NVDLIDLQVRYRSNT---PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLL----GLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~ 1339 (1510)
.|+++|++++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999997432 3599999999999999999999999999999999999999999999999998753 245
Q ss_pred HhhcceEEecCcc--ccCcccHHHhcCCC---CCCC----HHHHHHHHHHcCch-HHHHhCcCCccccccCCCCCCChhH
Q 000438 1340 DLRSRFGIIPQEP--VLFEGTVRSNIDPI---GQYS----DEEIWKSLERCQLK-DVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp--~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
..|++++++||+| .+|..|+++|+... ...+ ++.+.++++.+++. +..... ..+||+||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKS-----------PFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCC-----------cccCCHHH
Confidence 6788999999998 57888999999521 1222 23467778888875 332222 34799999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChh
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPS 1487 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~ 1487 (1510)
|||++|||||+++|++|||||||++||+.+...+.+.|++.. ++.|||++||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999864 46899999999999875 9999999999999999999
Q ss_pred HHhcC
Q 000438 1488 RLLER 1492 (1510)
Q Consensus 1488 ~Ll~~ 1492 (1510)
+++++
T Consensus 231 ~~~~~ 235 (287)
T PRK13641 231 EIFSD 235 (287)
T ss_pred HHhcC
Confidence 98765
No 255
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-38 Score=379.71 Aligned_cols=216 Identities=24% Similarity=0.458 Sum_probs=190.2
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
..++++|++++|.. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++.+.+. .|+++
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 35999999999964 359999999999999999999999999999999999999999999999999987664 46789
Q ss_pred EEecCccccCcc-cHHHhcCC-CC--CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDP-IG--QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp-~~--~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
+|++|++.+|.. |+++|+.. .. ..+ ++++.++++..++.++....|. +||||||||++|||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~~-----------~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPH-----------QLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCChh-----------hCCHHHHHHHHHHH
Confidence 999999999976 99999963 21 222 3467788899998877665553 58999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC-
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP- 1493 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~- 1493 (1510)
||+++|+||+||||||+||..+...+.+.|++.. .+.|+|+|||+++.+.. ||||++|++|++++.|+|+++.+++
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~ 242 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPT 242 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCc
Confidence 9999999999999999999999999988887754 36899999999999876 9999999999999999999999887
Q ss_pred cHH
Q 000438 1494 SLF 1496 (1510)
Q Consensus 1494 ~~f 1496 (1510)
..|
T Consensus 243 ~~~ 245 (377)
T PRK11607 243 TRY 245 (377)
T ss_pred cHH
Confidence 444
No 256
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=381.09 Aligned_cols=200 Identities=31% Similarity=0.484 Sum_probs=178.8
Q ss_pred cceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHh----hcceEEecCccccCcc-
Q 000438 1283 LVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL----RSRFGIIPQEPVLFEG- 1357 (1510)
Q Consensus 1283 ~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L----R~~i~iIpQdp~LF~g- 1357 (1510)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.|+.+.+..++ |++++|+||++.+|..
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 48999999999999999999999999999999999999999999999999998877654 3579999999999965
Q ss_pred cHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeC
Q 000438 1358 TVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDE 1430 (1510)
Q Consensus 1358 TIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDE 1430 (1510)
|+++|+... ...+ ++++.++|+.++|.++....|. +||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~~-----------~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYPD-----------ELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCcc-----------cCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 999999631 1122 3567889999999877666553 689999999999999999999999999
Q ss_pred CCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1431 ATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1431 aTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
||++||+.+.+.+++.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+|+++++++
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~ 256 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNP 256 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCc
Confidence 999999999999999999864 47899999999999876 9999999999999999999999876
No 257
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-38 Score=360.28 Aligned_cols=211 Identities=26% Similarity=0.445 Sum_probs=187.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++|++++|+. ..+++|+||+|++||++||+|+||||||||+++|+|+++|.+|+|.+||.++...+. .|+.+++
T Consensus 1 l~~~~l~~~~~~--~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGG--FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 478999999974 359999999999999999999999999999999999999999999999999987654 3678999
Q ss_pred ecCccccCcc-cHHHhcCCC-C------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFEG-TVRSNIDPI-G------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~-~------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||+|.+|.+ |+++|+... . ...++++.++++..++.++....| .+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~laral 145 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARAL 145 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999999976 999999621 1 112457788899999887776655 36899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
+++|+||||||||++||..+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~ 222 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEP 222 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCC
Confidence 999999999999999999999999999998653 7899999999999876 9999999999999999999998765
No 258
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=365.92 Aligned_cols=214 Identities=21% Similarity=0.353 Sum_probs=189.9
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcce
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRF 1345 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1345 (1510)
-.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999974 3599999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEecCccccCc-ccHHHhcCCCC--------C---CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHH
Q 000438 1346 GIIPQEPVLFE-GTVRSNIDPIG--------Q---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1510)
Q Consensus 1346 ~iIpQdp~LF~-gTIR~NLdp~~--------~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl 1413 (1510)
+|+||++.+|. .|+++|+.... . ..+++++++++..++.+..... ..+||+|||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----------VDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----------cccCChHHHHHH
Confidence 99999998875 59999996421 1 1234678899999887654433 347899999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1414 ~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
+||||++++|++|+|||||++||+++...+.+.|++..+ ++|||+++|+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998643 7899999999999877 9999999999999999999987
Q ss_pred cC
Q 000438 1491 ER 1492 (1510)
Q Consensus 1491 ~~ 1492 (1510)
+.
T Consensus 233 ~~ 234 (265)
T PRK10253 233 TA 234 (265)
T ss_pred hH
Confidence 53
No 259
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.7e-38 Score=342.99 Aligned_cols=172 Identities=35% Similarity=0.630 Sum_probs=162.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++|++++|+.+..++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997544469999999999999999999999999999999999999999999999999999998899999999
Q ss_pred ecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000438 1348 IPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1510)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILi 1427 (1510)
++|+|.+|++|+++|+ ||+|||||++|||||+++|++||
T Consensus 81 ~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~ll 119 (173)
T cd03246 81 LPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRILV 119 (173)
T ss_pred ECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 89999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhhcCEEEEEeCCEE
Q 000438 1428 MDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMDCDRVIVVDAGWA 1480 (1510)
Q Consensus 1428 LDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL~~G~i 1480 (1510)
|||||++||+.+.+.+.+.|++.. +++|+|+++|+++.+..||+|++|++|++
T Consensus 120 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 120 LDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999998864 47899999999999988999999999974
No 260
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-38 Score=365.46 Aligned_cols=218 Identities=26% Similarity=0.412 Sum_probs=188.5
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCCCC-HHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLLG-LHD 1340 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i~-l~~ 1340 (1510)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 5899999999974 3599999999999999999999999999999999999986 6999999999998763 456
Q ss_pred hhcceEEecCccccCcccHHHhcCCC----CCCCHHHH----HHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHH
Q 000438 1341 LRSRFGIIPQEPVLFEGTVRSNIDPI----GQYSDEEI----WKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1510)
Q Consensus 1341 LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~sd~eI----~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQr 1412 (1510)
+|++++|+||+|.+|..|+++|+... ...+++++ .++++.+++.+.. ++.+.....+||+|||||
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LSgGq~qr 171 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAV-------KDRLSDSPFRLSGGQQQL 171 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhCCcccCCHHHHHH
Confidence 78999999999999999999999631 12344443 4556667665432 122334566899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1413 l~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
++|||||+++|+||||||||++||..+.+.+.+.|++..+++|||+|+|+++.+.+ ||||++|++|++++.|+++++.+
T Consensus 172 l~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 251 (276)
T PRK14271 172 LCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFS 251 (276)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999999876 99999999999999999999988
Q ss_pred CC
Q 000438 1492 RP 1493 (1510)
Q Consensus 1492 ~~ 1493 (1510)
.+
T Consensus 252 ~~ 253 (276)
T PRK14271 252 SP 253 (276)
T ss_pred Cc
Confidence 75
No 261
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-38 Score=363.80 Aligned_cols=218 Identities=26% Similarity=0.433 Sum_probs=186.5
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCC--CCHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISL--LGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~l~ 1339 (1510)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGS--FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECC--EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 5899999999974 2599999999999999999999999999999999999974 69999999999854 4456
Q ss_pred HhhcceEEecCccccCc-ccHHHhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1340 DLRSRFGIIPQEPVLFE-GTVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
.+|+.++++||++.+|. .|+++|+... +..+ ++.+.++++.+++.+.+.. .......+||+|||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 154 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKD-------RLDKPGGGLSGGQQ 154 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHH
Confidence 78899999999999997 5999999521 1112 3456778888888544321 12233457999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEe------CCEEEEe
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVD------AGWAKEF 1483 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~------~G~ivE~ 1483 (1510)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||||++|+ +|+|++.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 9999999999999999999999999999999999999987667899999999999876 99999997 8999999
Q ss_pred cChhHHhcCC
Q 000438 1484 GKPSRLLERP 1493 (1510)
Q Consensus 1484 gsp~~Ll~~~ 1493 (1510)
|+++++++++
T Consensus 235 ~~~~~~~~~~ 244 (258)
T PRK14241 235 DDTEKIFSNP 244 (258)
T ss_pred CCHHHHHhCc
Confidence 9999998765
No 262
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-38 Score=362.06 Aligned_cols=218 Identities=28% Similarity=0.395 Sum_probs=188.8
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCCC--CHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLL--GLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l~ 1339 (1510)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 5899999999963 3599999999999999999999999999999999999763 489999999999876 456
Q ss_pred HhhcceEEecCccccCcccHHHhcCCCC---C-C----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPIG---Q-Y----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~---~-~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
..|++++|+||+|.+|.+|+++|+.... . . .++.+.++++.+++.+.+. +.....+.+||+||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~q 156 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVK-------DRLHDSALSLSGGQQQ 156 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhH-------HHhhcChhhCCHHHHH
Confidence 7888999999999999999999997321 1 1 1345677788877754432 2234455689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++||||++.+|++|||||||++||.++.+.+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 157 RLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 999999999999999999999999999999999999987777899999999999976 9999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
+++
T Consensus 237 ~~~ 239 (253)
T PRK14261 237 ENP 239 (253)
T ss_pred hCC
Confidence 765
No 263
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-38 Score=362.31 Aligned_cols=213 Identities=23% Similarity=0.398 Sum_probs=188.0
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 2 MLEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 3789999999974 35999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EecCcccc-CcccHHHhcCCCC--C-C----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1347 IIPQEPVL-FEGTVRSNIDPIG--Q-Y----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1347 iIpQdp~L-F~gTIR~NLdp~~--~-~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
++||++.+ +..|+++|+.... . . .++++.++++..++.+.....+ ..||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDY-----------PQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999987 6779999996321 1 1 2346788899988876544433 4689999999999999
Q ss_pred Hc------cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000438 1419 ML------KHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1419 LL------r~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
|+ ++|++|+|||||++||+.+...+.+.|++.. ++.|||+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999864 47899999999999975 999999999999999999998
Q ss_pred hcC
Q 000438 1490 LER 1492 (1510)
Q Consensus 1490 l~~ 1492 (1510)
.+.
T Consensus 229 ~~~ 231 (258)
T PRK13548 229 LTP 231 (258)
T ss_pred hCh
Confidence 764
No 264
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-38 Score=363.58 Aligned_cols=219 Identities=24% Similarity=0.420 Sum_probs=189.6
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCC-----CcEEEEcCeeCCC--CCH
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS-----GGRIIIDGIDISL--LGL 1338 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~-----~G~I~IDG~dI~~--i~l 1338 (1510)
+.|+++|++++|+. +.+|+|+||+|++||.+||+|++|||||||+++|.|+++|+ +|+|.+||.|++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 47999999999964 35999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HHhhcceEEecCccccCcccHHHhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1339 HDLRSRFGIIPQEPVLFEGTVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
..+|+.++++||++.+|..|+++|+... +..+ ++++.++++.+++.+++..+ .......||+|||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LSgGq~ 156 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHK-------IHKSALDLSGGQQ 156 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhH-------hcCCcccCCHHHH
Confidence 5778899999999999999999999631 1112 34567788888887655421 2334568999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeC-----CEEEE
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDA-----GWAKE 1482 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~-----G~ivE 1482 (1510)
||++|||||+++|+||||||||++||.++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |++++
T Consensus 157 qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~ 236 (261)
T PRK14258 157 QRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVE 236 (261)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEE
Confidence 99999999999999999999999999999999999999843 47999999999999976 999999999 99999
Q ss_pred ecChhHHhcCC
Q 000438 1483 FGKPSRLLERP 1493 (1510)
Q Consensus 1483 ~gsp~~Ll~~~ 1493 (1510)
.|+|+++.+++
T Consensus 237 ~~~~~~~~~~~ 247 (261)
T PRK14258 237 FGLTKKIFNSP 247 (261)
T ss_pred eCCHHHHHhCC
Confidence 99999998776
No 265
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-38 Score=359.62 Aligned_cols=213 Identities=27% Similarity=0.506 Sum_probs=183.1
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH-hhcce
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD-LRSRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i 1345 (1510)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 3889999999964 35999999999999999999999999999999999999999999999999998877654 57889
Q ss_pred EEecCccccCcc-cHHHhcCCCC----CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDPIG----QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~----~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
+++||+|.+|.+ |+++|+.... ..+ ++.+.+.++..++.+.. ......||+|||||++||
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la 149 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLR-----------DSMGQSLSGGERRRVEIA 149 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHh-----------hcchhhCCHHHHHHHHHH
Confidence 999999998875 9999997431 112 23455666666654432 233457999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
||++++|++|||||||++||+.+...+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++++.|+++++++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999999999998754 47899999999988866 999999999999999999998764
No 266
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.3e-38 Score=347.48 Aligned_cols=200 Identities=32% Similarity=0.454 Sum_probs=160.5
Q ss_pred EEEeeeEEEccCCC-CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------
Q 000438 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------- 708 (1510)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 708 (1510)
++++|+++.|.... ..++|+++||+|++||+++|+||+||||||||++|.|...|++|.|.++|
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 56889999886432 24799999999999999999999999999999999999999999999998
Q ss_pred --eEEEEcCCCc-CCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHh
Q 000438 709 --TTAYVAQTSW-IQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1510)
Q Consensus 709 --~iayv~Q~~~-i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~ 785 (1510)
.+|||+|+.. +++.|++|||.++..+......+ .......-++.+..++. ....++.+|||||||||||||||+
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~--~~~~~~~l~~~lgl~~~-~~~~~p~eLSGGqqQRVAIARAL~ 158 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGR--RKRAAEELLEVLGLEDR-LLKKKPSELSGGQQQRVAIARALI 158 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhH--HHHHHHHHHHhcCChhh-hccCCchhcCHHHHHHHHHHHHHh
Confidence 2899999965 67889999999643322211110 00111112222222221 123568899999999999999999
Q ss_pred cCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCEEE
Q 000438 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREGMIV 847 (1510)
Q Consensus 786 ~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~i~ 847 (1510)
.+|+++|.||||.+||.++++.+++.+.+... .|+|+|+||||.+....|||++.|+||++.
T Consensus 159 ~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 159 NNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred cCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 99999999999999999999999987766554 489999999999999999999999999954
No 267
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.6e-38 Score=357.95 Aligned_cols=211 Identities=27% Similarity=0.440 Sum_probs=178.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH-hhcceE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD-LRSRFG 1346 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i~ 1346 (1510)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ--SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC--eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 578999999974 35999999999999999999999999999999999999999999999999998877655 467899
Q ss_pred EecCccccCcc-cHHHhcCCC-CC--CCHH-HHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHcc
Q 000438 1347 IIPQEPVLFEG-TVRSNIDPI-GQ--YSDE-EIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1510)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~-~~--~sd~-eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1421 (1510)
++||++.+|.+ |+++|+... .. ..++ ...++++..+. ++........+||+|||||++|||||++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~----------l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV----------LKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh----------HHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999986 999999631 11 1222 23344444431 2222233345799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1422 ~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
+|+||+|||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++-
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999999999999998653 7899999999999986 9999999999999999999873
No 268
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-38 Score=353.00 Aligned_cols=200 Identities=27% Similarity=0.430 Sum_probs=176.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++|++++|+.. . .|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999642 2 39999999999999999999999999999999999999999999999986653 4678999
Q ss_pred ecCccccCcc-cHHHhcCCC-C---C---CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFEG-TVRSNIDPI-G---Q---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~-~---~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||+|.+|.+ |+++|+... . . .+++++.++++.+++.+.....|. +||+|||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLPG-----------ELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCcc-----------cCCHHHHHHHHHHHHH
Confidence 9999999976 999999632 1 1 235578899999999877666553 6899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
+++|++|||||||++||.++...+.+.|++.. .++|+|+|+|+++.+.. ||||++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999864 37899999999999977 9999999999998865
No 269
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-38 Score=365.98 Aligned_cols=214 Identities=25% Similarity=0.416 Sum_probs=185.4
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCC--CCHHHhhcce
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL--LGLHDLRSRF 1345 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~--i~l~~LR~~i 1345 (1510)
++++|++++|+.+ .++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 6899999999633 359999999999999999999999999999999999999999999999999852 2345678999
Q ss_pred EEecCcc--ccCcccHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1346 GIIPQEP--VLFEGTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1346 ~iIpQdp--~LF~gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
+|+||+| .+|..|+++|+... ...+ .+++.++++.+++.++.... ..+||+|||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LS~Gq~qrv~la 149 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKP-----------PHHLSGGQKKRVAIA 149 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCC-----------hhhCCHHHHHHHHHH
Confidence 9999998 57889999999521 1122 24577888888886554332 236999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
|||+++|++|||||||++||+.+...+.+.|++.. ++.|||+++|+++.+.. ||+|++|++|++++.|+++++++.+
T Consensus 150 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 228 (275)
T PRK13639 150 GILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSDI 228 (275)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCh
Confidence 99999999999999999999999999999999865 37899999999999986 9999999999999999999988643
No 270
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-38 Score=363.20 Aligned_cols=218 Identities=22% Similarity=0.339 Sum_probs=190.5
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCCC--CHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLL--GLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l~ 1339 (1510)
.+.+++.+++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++| .+|+|.+||.|+... ...
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4888999999964 3599999999999999999999999999999999999986 799999999998643 444
Q ss_pred HhhcceEEecCccccCcccHHHhcCCCC------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPIG------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl 1413 (1510)
.+|++++|+||+|.+|..|+++|+.... ...++++.++++.+++.+.+... ..+...+||+|||||+
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~-------~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKDK-------LKVSGLSLSGGQQQRL 158 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhhh-------hhCCcccCCHHHHHHH
Confidence 6788999999999999999999997421 11235788899999987655432 2345568999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEe--------CCEEEEec
Q 000438 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVD--------AGWAKEFG 1484 (1510)
Q Consensus 1414 ~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~--------~G~ivE~g 1484 (1510)
+|||||+++|+||+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.+ ||||++|+ +|++++.|
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g 238 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMG 238 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeC
Confidence 9999999999999999999999999999999999988777899999999999876 99999996 89999999
Q ss_pred ChhHHhcCC
Q 000438 1485 KPSRLLERP 1493 (1510)
Q Consensus 1485 sp~~Ll~~~ 1493 (1510)
+++++++++
T Consensus 239 ~~~~~~~~~ 247 (261)
T PRK14263 239 PTAQIFQNP 247 (261)
T ss_pred CHHHHHhCC
Confidence 999998765
No 271
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.9e-38 Score=372.74 Aligned_cols=212 Identities=27% Similarity=0.426 Sum_probs=183.4
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999974 3599999999999999999999999999999999999999999999999998754 356789999
Q ss_pred EecCccccCc-ccHHHhcCCC---CCCCHH----HHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1347 IIPQEPVLFE-GTVRSNIDPI---GQYSDE----EIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1347 iIpQdp~LF~-gTIR~NLdp~---~~~sd~----eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
|+||+|.+|. .|+++|+..+ ...++. ++.++++.+++.+.. +..+ .+||||||||++||||
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~-------~~~~----~~LSgG~~qrv~la~a 149 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKA-------DVRV----ALLSGGMKRRLTLARA 149 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHh-------cCch----hhCCHHHHHHHHHHHH
Confidence 9999999885 5999999621 123332 345567777765433 3333 3699999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1419 LLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
|+++|++|+|||||++||+.+.+.+.+.|++.. +++|||+++|+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999999864 47899999999999976 999999999999999999999764
No 272
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.9e-38 Score=365.03 Aligned_cols=226 Identities=23% Similarity=0.387 Sum_probs=191.0
Q ss_pred eEEEEEEEEEecC-------CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHH
Q 000438 1267 NVDLIDLQVRYRS-------NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~-------~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~ 1339 (1510)
-|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 4899999999952 123599999999999999999999999999999999999999999999999999766666
Q ss_pred HhhcceEEecCccc--cCcc-cHHHhcCC---CC-C----CCHHHHHHHHHHcCch-HHHHhCcCCccccccCCCCCCCh
Q 000438 1340 DLRSRFGIIPQEPV--LFEG-TVRSNIDP---IG-Q----YSDEEIWKSLERCQLK-DVVAAKPDKLDSLVADSGDNWSV 1407 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~--LF~g-TIR~NLdp---~~-~----~sd~eI~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLS~ 1407 (1510)
..|++++|+||+|. ++.. |+.+|+.. .+ . ..++++.++++.+++. +..... ..+||+
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYY-----------PHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcC-----------chhcCH
Confidence 66778999999985 4443 88888741 11 1 1235688899999984 333222 236999
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1408 GQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1408 GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
|||||++|||||+++|+||||||||++||+++.+.+.+.|++..+ +.|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999998643 7899999999999987 9999999999999999
Q ss_pred ChhHHhcCC--cHHHHHHHHH
Q 000438 1485 KPSRLLERP--SLFGALVQEY 1503 (1510)
Q Consensus 1485 sp~~Ll~~~--~~f~~lv~~~ 1503 (1510)
+++++.+++ ..+++++..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~ 253 (267)
T PRK15112 233 STADVLASPLHELTKRLIAGH 253 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHhc
Confidence 999999876 5566777654
No 273
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3.2e-38 Score=358.47 Aligned_cols=211 Identities=27% Similarity=0.467 Sum_probs=185.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++|++++|+. +.+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~i~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGS--FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECC--eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 578999999974 359999999999999999999999999999999999999999999999999986653 4788999
Q ss_pred ecCccccCcc-cHHHhcCCCC---CC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFEG-TVRSNIDPIG---QY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~~---~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||+|.+|.+ |+++|+.... .. .++++.+++++.++.+...+.+ .+||+||+||++|||||
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~laral 145 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYP-----------NQLSGGQRQRVALARAL 145 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999999976 9999996321 11 2456778888888876654433 47899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
+++|+|++|||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|+++|.|+++++++.+
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~~ 222 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDHP 222 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcCC
Confidence 999999999999999999999999999998644 6899999999999877 9999999999999999999998654
No 274
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-39 Score=371.85 Aligned_cols=211 Identities=32% Similarity=0.435 Sum_probs=174.6
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EE
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TA 711 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------ia 711 (1510)
..++++|++++|+ +..+++|+||+|++||+++++|||||||||||++|+|+..|++|+|.++|+ ++
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig 80 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIG 80 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccc
Confidence 4799999999996 468999999999999999999999999999999999999999999999994 79
Q ss_pred EEcCCCcCC-CccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000438 712 YVAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1510)
Q Consensus 712 yv~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i 790 (1510)
+|+|+.-+| +.||+|||.||.......-++.++. ...+-++.....+ .-.+++.+|||||||||||||||..+|++
T Consensus 81 ~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~-rv~e~L~lV~L~~--~~~R~p~qLSGGQqQRVALARAL~~~P~v 157 (352)
T COG3842 81 MVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKA-RVEEALELVGLEG--FADRKPHQLSGGQQQRVALARALVPEPKV 157 (352)
T ss_pred eeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHH-HHHHHHHHcCchh--hhhhChhhhChHHHHHHHHHHHhhcCcch
Confidence 999997664 7899999999987322111111100 1112222222221 23468899999999999999999999999
Q ss_pred EEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCc-cccCCEEEEEeCCEEEEecChHHHHhcC
Q 000438 791 YLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDF-LHNVDLILVMREGMIVQSGRYNALLNSG 859 (1510)
Q Consensus 791 ~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~-l~~~D~i~~l~~G~i~~~g~~~~l~~~~ 859 (1510)
+|||||+||||.+.++++-.++.+... .|.|.|+||||.++ +..+|||++|++|+|.+.|+++|+....
T Consensus 158 LLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 158 LLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred hhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 999999999999999999888776554 39999999999987 5669999999999999999999998653
No 275
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-38 Score=369.79 Aligned_cols=220 Identities=27% Similarity=0.469 Sum_probs=190.1
Q ss_pred CceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-----CCCcEEEEcCeeCCCC--C
Q 000438 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISLL--G 1337 (1510)
Q Consensus 1265 ~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~i--~ 1337 (1510)
+..|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++... +
T Consensus 43 ~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 43 DAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred CceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 446999999999974 359999999999999999999999999999999999986 6899999999998753 4
Q ss_pred HHHhhcceEEecCccccCcccHHHhcCCC-C-------------------CCCHHHHHHHHHHcCchHHHHhCcCCcccc
Q 000438 1338 LHDLRSRFGIIPQEPVLFEGTVRSNIDPI-G-------------------QYSDEEIWKSLERCQLKDVVAAKPDKLDSL 1397 (1510)
Q Consensus 1338 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~-~-------------------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~ 1397 (1510)
...+|++++|+||++.+|.+|+++|+... . +..++++.++++.+++.+.+. ..
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVN-------DR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhh-------HH
Confidence 56788999999999999999999999621 0 012455788888888754332 23
Q ss_pred ccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEE-EEE
Q 000438 1398 VADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRV-IVV 1475 (1510)
Q Consensus 1398 v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrI-lVL 1475 (1510)
......+||+|||||++|||||+++|+||||||||++||+.+...+.+.|++..++.|+|+|+|+++.+.. ||+| ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 34456789999999999999999999999999999999999999999999988777899999999999876 9997 578
Q ss_pred eCCEEEEecChhHHhcCC
Q 000438 1476 DAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1476 ~~G~ivE~gsp~~Ll~~~ 1493 (1510)
++|++++.|+++++.+++
T Consensus 274 ~~G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 274 TGGELVEYDDTDKIFENP 291 (305)
T ss_pred cCCEEEEeCCHHHHHhCc
Confidence 999999999999998653
No 276
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-38 Score=361.06 Aligned_cols=218 Identities=26% Similarity=0.404 Sum_probs=188.5
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCC-CCCHHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDIS-LLGLHD 1340 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~-~i~l~~ 1340 (1510)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| .+|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4889999999974 4599999999999999999999999999999999999986 5999999999986 455677
Q ss_pred hhcceEEecCccccCcccHHHhcCCC---CCC-C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHH
Q 000438 1341 LRSRFGIIPQEPVLFEGTVRSNIDPI---GQY-S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1510)
Q Consensus 1341 LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~-s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQr 1412 (1510)
+|+.++|+||+|.+|.+|+++|+... ... . ++++.++++.+++.+.+. .........||+|||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~qr 153 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQR 153 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHHH
Confidence 89999999999999999999999632 111 1 234567788888765432 12233345799999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1413 l~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFS 233 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999998777899999999999887 99999999999999999999876
Q ss_pred CC
Q 000438 1492 RP 1493 (1510)
Q Consensus 1492 ~~ 1493 (1510)
++
T Consensus 234 ~~ 235 (249)
T PRK14253 234 NP 235 (249)
T ss_pred CC
Confidence 54
No 277
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.2e-37 Score=360.08 Aligned_cols=214 Identities=43% Similarity=0.705 Sum_probs=192.5
Q ss_pred CCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCeEEEEcCCCcCC
Q 000438 641 DNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGTTAYVAQTSWIQ 720 (1510)
Q Consensus 641 ~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~iayv~Q~~~i~ 720 (1510)
....|+++|+++.+ +++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|.++|++|+++++
T Consensus 36 ~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g~i~yv~q~~~l~ 110 (282)
T cd03291 36 DDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSGRISFSSQFSWIM 110 (282)
T ss_pred CCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEEEEeCccccc
Confidence 45679999999962 4699999999999999999999999999999999999999999999999999999999998
Q ss_pred CccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCC
Q 000438 721 NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAV 800 (1510)
Q Consensus 721 ~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~sal 800 (1510)
+.|++||+.++......++.+.++++.+...+..++.+.++.+++++.+||||||||++||||++.+|+++||||||++|
T Consensus 111 ~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gL 190 (282)
T cd03291 111 PGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYL 190 (282)
T ss_pred ccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccC
Confidence 89999999997655444556677777888888888888888888999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcC
Q 000438 801 DAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSG 859 (1510)
Q Consensus 801 D~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~ 859 (1510)
|+.+.+.+.+.++....+++|+|++||+++++..||++++|++|++++.|+.+++.+..
T Consensus 191 D~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 249 (282)
T cd03291 191 DVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLR 249 (282)
T ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcc
Confidence 99999888876655445689999999999998889999999999999999999887543
No 278
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-38 Score=365.84 Aligned_cols=213 Identities=25% Similarity=0.384 Sum_probs=184.1
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCC--CCCHHHhhcce
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDIS--LLGLHDLRSRF 1345 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~--~i~l~~LR~~i 1345 (1510)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 689999999964 35999999999999999999999999999999999999999999999999985 33456778899
Q ss_pred EEecCccc--cCcccHHHhcCCC---CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1346 GIIPQEPV--LFEGTVRSNIDPI---GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1346 ~iIpQdp~--LF~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
+++||+|. +|..|+.+|+... ...++ +++.++++..++.++.... ..+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrl~la 148 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQP-----------IQCLSHGQKKRVAIA 148 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcCC-----------chhCCHHHHHHHHHH
Confidence 99999985 5778999998631 11222 3466788888886654322 347999999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
|||+.+|+||||||||++||+.+...+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 149 raL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (271)
T PRK13638 149 GALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFACT 227 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCh
Confidence 99999999999999999999999999999999864 47899999999999976 9999999999999999999987654
No 279
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-38 Score=360.02 Aligned_cols=203 Identities=26% Similarity=0.390 Sum_probs=179.7
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.|+++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++
T Consensus 12 ~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i~ 84 (257)
T PRK11247 12 PLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDTR 84 (257)
T ss_pred cEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCceE
Confidence 5999999999974 35999999999999999999999999999999999999999999999998763 5688999
Q ss_pred EecCccccCc-ccHHHhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000438 1347 IIPQEPVLFE-GTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1510)
Q Consensus 1347 iIpQdp~LF~-gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~k 1424 (1510)
|+||+|.+|. .|+++|+... ....++++.++++..++.+.....| .+||||||||++|||||+++|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRANEWP-----------AALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhcCCh-----------hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999987 5999999742 2223567888999999876544333 4789999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChh
Q 000438 1425 LLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPS 1487 (1510)
Q Consensus 1425 ILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~ 1487 (1510)
+|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999999999999998864 37899999999999866 9999999999999988754
No 280
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.2e-38 Score=375.36 Aligned_cols=212 Identities=29% Similarity=0.484 Sum_probs=184.5
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+ ...|++++
T Consensus 41 ~i~i~nl~k~y~~--~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGD--KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 5999999999974 35999999999999999999999999999999999999999999999999997654 56789999
Q ss_pred EecCccccC-cccHHHhcCCCC---CCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1347 IIPQEPVLF-EGTVRSNIDPIG---QYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1347 iIpQdp~LF-~gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
|+||++.+| ..|+++|+..+. ..+. +.+.++++.++|.+. .+..+ .+||+|||||++||||
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~-------~~~~~----~~LS~G~kqrv~lA~a 186 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-------ADARV----SDLSGGMKRRLTLARA 186 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-------hCCCh----hhCCHHHHHHHHHHHH
Confidence 999999987 559999996322 1222 234566777776543 34443 3699999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1419 LLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
|+.+|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999999864 47899999999999977 999999999999999999999764
No 281
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=4.8e-38 Score=371.70 Aligned_cols=224 Identities=26% Similarity=0.430 Sum_probs=187.1
Q ss_pred eEEEEEEEEEecC--CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCC---CcEEEEcCeeCCCCCHHHh
Q 000438 1267 NVDLIDLQVRYRS--NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS---GGRIIIDGIDISLLGLHDL 1341 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~--~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~---~G~I~IDG~dI~~i~l~~L 1341 (1510)
-++++|++++|+. +...+++||||+|++||++||+|+||||||||+++|.|+++|. +|+|.+||.|+.+++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 5899999999964 2245999999999999999999999999999999999999996 9999999999999987776
Q ss_pred h----cceEEecCcc--ccCc-ccHHHhcC----CCCCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCC
Q 000438 1342 R----SRFGIIPQEP--VLFE-GTVRSNID----PIGQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWS 1406 (1510)
Q Consensus 1342 R----~~i~iIpQdp--~LF~-gTIR~NLd----p~~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1406 (1510)
| ++|++||||| .++. -|+.+|+. .....+. +++.++|+.++|.+ +. ..+......||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~-------~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPE-------AR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCC-------hH-HHhcCCcccCC
Confidence 4 4799999999 4554 37777662 2222232 34566777777642 11 11334456799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000438 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1407 ~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1483 (1510)
||||||++|||||+.+|+|||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||.+|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999988654 7899999999999976 999999999999999
Q ss_pred cChhHHhcCC-cHHHH
Q 000438 1484 GKPSRLLERP-SLFGA 1498 (1510)
Q Consensus 1484 gsp~~Ll~~~-~~f~~ 1498 (1510)
|+++++++++ ..|.+
T Consensus 244 g~~~~i~~~p~~pyt~ 259 (330)
T PRK09473 244 GNARDVFYQPSHPYSI 259 (330)
T ss_pred CCHHHHHhCCCCHHHH
Confidence 9999999887 44544
No 282
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-39 Score=335.45 Aligned_cols=205 Identities=30% Similarity=0.437 Sum_probs=172.8
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCC-----cEEEECCe--------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKIS-----GKVKVCGT-------- 709 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~-----G~i~~~g~-------- 709 (1510)
..++++|+++.|+ ++.+|+|||++|++++++|++||+||||||||+++.+..+... |+|.++|+
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 5789999999996 4579999999999999999999999999999999999887665 89999883
Q ss_pred -------EEEEcCCCcCCCccHHHHHhcCCCCCh---hhHHHH----HHHhchHHHHHhcccCCcccccCCCCccChHHH
Q 000438 710 -------TAYVAQTSWIQNGTIEENILFGLPMNR---AKYGEV----VRVCCLEKDLEMMEYGDQTEIGERGINLSGGQK 775 (1510)
Q Consensus 710 -------iayv~Q~~~i~~~Tv~enI~fg~~~~~---~~~~~v----~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 775 (1510)
+|+|+|.|.-|..||+|||.+|..... ...+++ ++..+|-... .| .+.+.+..||||||
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEV-----KD--rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEV-----KD--RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHh-----HH--HhhCCccCCChhHH
Confidence 799999999999999999999965322 222222 2333332211 12 34567888999999
Q ss_pred HHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000438 776 QRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNA 854 (1510)
Q Consensus 776 qRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~ 854 (1510)
||++|||||.-+|+|+|+|||||||||.+..+| ++++..+.++-|+|+|||+++.... +|+...+.+|+++|.|+.++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kI-EeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKI-EELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHH-HHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 999999999999999999999999999999988 5677777788999999999998766 79999999999999999998
Q ss_pred HHhc
Q 000438 855 LLNS 858 (1510)
Q Consensus 855 l~~~ 858 (1510)
+..+
T Consensus 235 iF~~ 238 (253)
T COG1117 235 IFTN 238 (253)
T ss_pred hhcC
Confidence 8754
No 283
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-38 Score=354.66 Aligned_cols=209 Identities=24% Similarity=0.416 Sum_probs=185.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+. . ..|+||+|++||++||+|+||||||||+++|.|+++|.+|+|.+||.++...+. .+++++|
T Consensus 2 l~~~~l~~~~~~-~---~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHH-L---PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECC-c---cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 689999999973 2 239999999999999999999999999999999999999999999999886644 3568999
Q ss_pred ecCccccCcc-cHHHhcCC-CC-C-----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFEG-TVRSNIDP-IG-Q-----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp-~~-~-----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||+|.+|.+ |+++|+.. +. . ..++++.++++.+++.+.+...|. .||+|||||++||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~G~~qrv~laral 144 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLPG-----------QLSGGQRQRVALARCL 144 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCcc-----------cCCHHHHHHHHHHHHH
Confidence 9999999986 99999963 21 1 124568999999999887766653 5899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
+++|++|||||||++||.++.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++..++
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~~ 221 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSGK 221 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCh
Confidence 999999999999999999999999999998653 7899999999999876 9999999999999999999998764
No 284
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3.1e-38 Score=370.49 Aligned_cols=211 Identities=24% Similarity=0.383 Sum_probs=187.4
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999963 459999999999999999999999999999999999999999999999999977 44678899999
Q ss_pred ecCccccCcc-cHHHhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFEG-TVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||+|.+|.+ |+++||..+. ..+ ++++.++++..++.+..... ..+||+|||||++|||||
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qrv~la~al 148 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKK-----------IGQLSKGYRQRVGLAQAL 148 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcCc-----------hhhCCHHHHHHHHHHHHH
Confidence 9999999977 9999996321 122 34677788888877654332 347999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
+++|++|+|||||++||+.+.+.+++.|++..+++|||+++|+++.+.. ||||++|++|++++.|+++++.++
T Consensus 149 ~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 149 IHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999998778999999999999987 999999999999999999998653
No 285
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=4.4e-38 Score=355.58 Aligned_cols=206 Identities=25% Similarity=0.365 Sum_probs=180.4
Q ss_pred eEEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH---h
Q 000438 1267 NVDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---L 1341 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---L 1341 (1510)
.|+++|++++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+ .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 589999999997532 25999999999999999999999999999999999999999999999999998877654 2
Q ss_pred -hcceEEecCccccCcc-cHHHhcCC---CCCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHH
Q 000438 1342 -RSRFGIIPQEPVLFEG-TVRSNIDP---IGQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1510)
Q Consensus 1342 -R~~i~iIpQdp~LF~g-TIR~NLdp---~~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQr 1412 (1510)
+++++++||+|.+|.+ |+++|+.. +... ..+++.++++.+++.+.....|. .||+|||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLPA-----------QLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCChh-----------hCCHHHHHH
Confidence 3679999999999875 99999953 1111 23567888999999877655543 689999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhhcCEEEEEeCCEEEEe
Q 000438 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1413 l~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~ 1483 (1510)
++|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+..||+|++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999988642 7899999999999988999999999999874
No 286
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-38 Score=357.03 Aligned_cols=210 Identities=23% Similarity=0.460 Sum_probs=186.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++|++++|.. + +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~--~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE--F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC--c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 478999999974 3 7999999999999999999999999999999999999999999999999987654 3688999
Q ss_pred ecCccccCc-ccHHHhcCC---CCCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFE-GTVRSNIDP---IGQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp---~~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||++.+|. .|+++|+.. .... .++++.++++.+++.+++.+.+ .+||+|||||++||||+
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 144 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP-----------ETLSGGEQQRVAIARAL 144 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc-----------ccCCHHHHHHHHHHHHH
Confidence 999999985 699999962 1111 2356788899999987766554 36899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
+++|++|+|||||++||..+.+.+.+.|++..+ ++|+|++||+++.+.+ ||+|++|++|++++.|+++++.+.+
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 999999999999999999999999999998643 7999999999999887 9999999999999999999998765
No 287
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.9e-38 Score=354.72 Aligned_cols=197 Identities=29% Similarity=0.485 Sum_probs=170.8
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEe
Q 000438 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGII 1348 (1510)
Q Consensus 1269 ~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iI 1348 (1510)
+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 36799999964 35999999999999999999999999999999999999999999999998864 578899999
Q ss_pred cCcccc---CcccHHHhcCCCCC-----------CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1349 PQEPVL---FEGTVRSNIDPIGQ-----------YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1349 pQdp~L---F~gTIR~NLdp~~~-----------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
||+|.+ |..|+++|+..... ..++++.++++.+++.+.....+ .+||||||||++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~ 142 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----------GELSGGQQQRVL 142 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHH
Confidence 999976 56899999963211 12356888999999877654433 368999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
|||||+++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++| +++.|
T Consensus 143 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 143 LARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999999864 57899999999999977 9999999986 55544
No 288
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=4.4e-38 Score=361.61 Aligned_cols=211 Identities=25% Similarity=0.413 Sum_probs=186.3
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 689999999964 359999999999999999999999999999999999999999999999999999888888889999
Q ss_pred ecCccc-cCcccHHHhcCCCC----C-------CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHH
Q 000438 1348 IPQEPV-LFEGTVRSNIDPIG----Q-------YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCL 1415 (1510)
Q Consensus 1348 IpQdp~-LF~gTIR~NLdp~~----~-------~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~L 1415 (1510)
+||+|. .+..|+++|+.... . ..++++.++++.+++.+..... ...||+|||||++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~l 148 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRD-----------MSTLSGGERQRVHV 148 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCC-----------cccCCHHHHHHHHH
Confidence 999995 45679999995321 0 1234678889998887654332 24689999999999
Q ss_pred HHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1416 GRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1416 ARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~-~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
|||++.+|+++||||||++||+.+...+.+.|++..+ +.|||+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 149 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 149 ARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999998643 6899999999999965 99999999999999999999865
No 289
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-38 Score=360.93 Aligned_cols=214 Identities=26% Similarity=0.420 Sum_probs=183.4
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHh-hcce
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL-RSRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i 1345 (1510)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5899999999964 359999999999999999999999999999999999999999999999999998876665 4569
Q ss_pred EEecCccccCcc-cHHHhcCCCCC----------------C--C----HHHHHHHHHHcCchHHHHhCcCCccccccCCC
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDPIGQ----------------Y--S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSG 1402 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~~----------------~--s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1402 (1510)
+++||+|.+|.+ |+++|+..... . . .+++.++++..++.+.. ....
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~ 151 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHA-----------NRQA 151 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhh-----------hCCh
Confidence 999999999986 99999973210 0 0 12345556666654433 3334
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCE
Q 000438 1403 DNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGW 1479 (1510)
Q Consensus 1403 ~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1510)
.+||+|||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+++|+++.+.+ ||+|++|++|+
T Consensus 152 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 231 (255)
T PRK11300 152 GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGT 231 (255)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 57999999999999999999999999999999999999999999987643 7899999999999977 99999999999
Q ss_pred EEEecChhHHhcCC
Q 000438 1480 AKEFGKPSRLLERP 1493 (1510)
Q Consensus 1480 ivE~gsp~~Ll~~~ 1493 (1510)
+++.|+++++.+++
T Consensus 232 i~~~~~~~~~~~~~ 245 (255)
T PRK11300 232 PLANGTPEEIRNNP 245 (255)
T ss_pred EEecCCHHHHhhCh
Confidence 99999999987643
No 290
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-38 Score=359.97 Aligned_cols=218 Identities=25% Similarity=0.397 Sum_probs=187.0
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC--C---CCcEEEEcCeeCCC--CCHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE--P---SGGRIIIDGIDISL--LGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e--p---~~G~I~IDG~dI~~--i~l~ 1339 (1510)
-|+++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999974 459999999999999999999999999999999999975 4 59999999999864 3455
Q ss_pred HhhcceEEecCccccCcccHHHhcCCC---CCC-C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPI---GQY-S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~-s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
.+|++++++||+|.+|..|+++|+... ... . ++++.++++.+++.+.+. ........+||+||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~Gq~q 155 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVK-------DHLHESALSLSGGQQQ 155 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchh-------hHHhcCcccCCHHHHH
Confidence 678899999999999999999999621 111 1 345677788887754332 1223344689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++|||||+++|+||||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.+..
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 156 RVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987667899999999999976 9999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
.++
T Consensus 236 ~~~ 238 (252)
T PRK14255 236 LNP 238 (252)
T ss_pred cCC
Confidence 776
No 291
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=7.8e-38 Score=352.03 Aligned_cols=203 Identities=26% Similarity=0.404 Sum_probs=176.2
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH---hhcc
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD---LRSR 1344 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR~~ 1344 (1510)
|+++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++.+. +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999533 45999999999999999999999999999999999999999999999999998876544 6889
Q ss_pred eEEecCccccC-cccHHHhcCCC---CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1345 FGIIPQEPVLF-EGTVRSNIDPI---GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1345 i~iIpQdp~LF-~gTIR~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
++|+||+|.+| ..|+++|+... ...++ +++.++++..++.+.....| .+||+|||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la 149 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNFP-----------IQLSGGEQQRVGIA 149 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------hhCCHHHHHHHHHH
Confidence 99999999874 67999999632 12232 34667888888876654433 46899999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKE 1482 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE 1482 (1510)
||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 150 RAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999999864 46899999999999987 89999999999853
No 292
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=6.9e-38 Score=354.04 Aligned_cols=206 Identities=31% Similarity=0.452 Sum_probs=173.2
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCH---HHhh
Q 000438 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL---HDLR 1342 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l---~~LR 1342 (1510)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68999999996431 259999999999999999999999999999999999999999999999999988763 5778
Q ss_pred cceEEecCcc--ccC-cccHHHhcCC----CC-CCCHHH---H-HHHHHHcCch-HHHHhCcCCccccccCCCCCCChhH
Q 000438 1343 SRFGIIPQEP--VLF-EGTVRSNIDP----IG-QYSDEE---I-WKSLERCQLK-DVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1343 ~~i~iIpQdp--~LF-~gTIR~NLdp----~~-~~sd~e---I-~~aL~~~~L~-~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
++++|+||+| .++ ..|+++|+.. .. ...+++ . .++++..++. +.. .....+||+||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~~LS~G~ 150 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVL-----------NRYPHELSGGQ 150 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHh-----------hCCchhcCHHH
Confidence 8999999999 344 5699999852 11 111221 1 2556666663 222 22335799999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
|||++|||||+++|+||+|||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 151 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 151 RQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 9999999999999999999999999999999999999998754 7899999999999985 9999999999998865
No 293
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-38 Score=371.01 Aligned_cols=221 Identities=24% Similarity=0.388 Sum_probs=187.5
Q ss_pred eEEEEEEEEEecC--CCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC----CCCcEEEEcCeeCCCCCHHH
Q 000438 1267 NVDLIDLQVRYRS--NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE----PSGGRIIIDGIDISLLGLHD 1340 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~--~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e----p~~G~I~IDG~dI~~i~l~~ 1340 (1510)
-++++|++++|+. +...+|+||||+|++||.+||+|+||||||||+++|.|+.+ |++|+|.+||.|+.+++.++
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4799999999953 22459999999999999999999999999999999999986 58999999999999888776
Q ss_pred hh----cceEEecCccc--cC-cccHHHhcC-C---C---CC------CCHHHHHHHHHHcCchHH---HHhCcCCcccc
Q 000438 1341 LR----SRFGIIPQEPV--LF-EGTVRSNID-P---I---GQ------YSDEEIWKSLERCQLKDV---VAAKPDKLDSL 1397 (1510)
Q Consensus 1341 LR----~~i~iIpQdp~--LF-~gTIR~NLd-p---~---~~------~sd~eI~~aL~~~~L~~~---i~~lp~gLdt~ 1397 (1510)
++ ++|++|||+|. ++ .-||.+|+. + . +. ..++++.++|++++|.+. ....|
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~p------ 156 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFP------ 156 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhCCc------
Confidence 53 47999999996 33 348888874 1 1 10 113567889999999743 22333
Q ss_pred ccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEE
Q 000438 1398 VADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIV 1474 (1510)
Q Consensus 1398 v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlV 1474 (1510)
..||||||||++|||||+.+|+|||+||||++||+.+...|.+.|++..+ +.|+|+|||+++.+.. ||||+|
T Consensus 157 -----~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~v 231 (330)
T PRK15093 157 -----YELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINV 231 (330)
T ss_pred -----hhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 36899999999999999999999999999999999999999999998653 7899999999999976 999999
Q ss_pred EeCCEEEEecChhHHhcCC-cHHHH
Q 000438 1475 VDAGWAKEFGKPSRLLERP-SLFGA 1498 (1510)
Q Consensus 1475 L~~G~ivE~gsp~~Ll~~~-~~f~~ 1498 (1510)
|++|+|+|.|+++++++++ ..|.+
T Consensus 232 m~~G~ive~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 232 LYCGQTVETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred EECCEEEEECCHHHHHhCCCCHHHH
Confidence 9999999999999999876 55544
No 294
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.3e-38 Score=337.29 Aligned_cols=205 Identities=30% Similarity=0.441 Sum_probs=169.9
Q ss_pred CccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000438 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1510)
...|+++++++++. ++.+++|+||+|++||+++|+|++||||||||++|.|+++|++|+|.+.|
T Consensus 6 ~~~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ 82 (263)
T COG1127 6 EPLIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYE 82 (263)
T ss_pred cceEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHH
Confidence 46899999999995 46899999999999999999999999999999999999999999999998
Q ss_pred ---eEEEEcCCCcCCC-ccHHHHHhcCCC----CChhhHHHH----HHHhchHHHHHhcccCCcccccCCCCccChHHHH
Q 000438 709 ---TTAYVAQTSWIQN-GTIEENILFGLP----MNRAKYGEV----VRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQ 776 (1510)
Q Consensus 709 ---~iayv~Q~~~i~~-~Tv~enI~fg~~----~~~~~~~~v----~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 776 (1510)
++|+++|+.-+|+ .||+|||.|... ..++..++. +++++|..+. ....+.+||||++.
T Consensus 83 ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~----------~~~~PsELSGGM~K 152 (263)
T COG1127 83 IRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAA----------ADLYPSELSGGMRK 152 (263)
T ss_pred HHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhh----------hhhCchhhcchHHH
Confidence 3799999988874 699999999642 222222211 2233333220 12356789999999
Q ss_pred HHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC--CcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChH
Q 000438 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK--GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYN 853 (1510)
Q Consensus 777 Rv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~--~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~ 853 (1510)
|++||||+..||+++++|||||+|||.++..+ ++++..+.+ |-|+|+||||++.+.. ||+|+++.||+|...|+++
T Consensus 153 RvaLARAialdPell~~DEPtsGLDPI~a~~~-~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~ 231 (263)
T COG1127 153 RVALARAIALDPELLFLDEPTSGLDPISAGVI-DELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPE 231 (263)
T ss_pred HHHHHHHHhcCCCEEEecCCCCCCCcchHHHH-HHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHH
Confidence 99999999999999999999999999988766 455544432 8999999999998765 8999999999999999999
Q ss_pred HHHhcCc
Q 000438 854 ALLNSGM 860 (1510)
Q Consensus 854 ~l~~~~~ 860 (1510)
|+.+.+.
T Consensus 232 el~~sd~ 238 (263)
T COG1127 232 ELLASDD 238 (263)
T ss_pred HHHhCCC
Confidence 9987543
No 295
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4.7e-38 Score=374.85 Aligned_cols=201 Identities=25% Similarity=0.349 Sum_probs=176.9
Q ss_pred CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCe----eCCCCCHHHh---h-cceEEecCccc
Q 000438 1282 PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI----DISLLGLHDL---R-SRFGIIPQEPV 1353 (1510)
Q Consensus 1282 ~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~----dI~~i~l~~L---R-~~i~iIpQdp~ 1353 (1510)
..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. |+...+.+.+ | ++++||||++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35899999999999999999999999999999999999999999999996 6777766554 3 57999999999
Q ss_pred cCc-ccHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000438 1354 LFE-GTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRL 1425 (1510)
Q Consensus 1354 LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kI 1425 (1510)
+|. .|+++|+... ...+ .+.+.++++.++|.++....| .+||||||||++|||||+++|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCCE
Confidence 997 6999999631 1222 245678899999987655544 35899999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1426 LFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1426 LiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
|||||||++||+.+.+.+++.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|++++.++
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p 256 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNP 256 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCc
Confidence 999999999999999999999998654 7899999999999866 9999999999999999999999876
No 296
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-38 Score=364.49 Aligned_cols=220 Identities=26% Similarity=0.396 Sum_probs=187.5
Q ss_pred CceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-----CCCcEEEEcCeeCCCC--C
Q 000438 1265 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-----PSGGRIIIDGIDISLL--G 1337 (1510)
Q Consensus 1265 ~g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~i--~ 1337 (1510)
...|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... .
T Consensus 37 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGE--FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred ceEEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 346899999999964 349999999999999999999999999999999999865 4999999999998643 3
Q ss_pred HHHhhcceEEecCccccCcccHHHhcCCC---CCC-C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhH
Q 000438 1338 LHDLRSRFGIIPQEPVLFEGTVRSNIDPI---GQY-S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1338 l~~LR~~i~iIpQdp~LF~gTIR~NLdp~---~~~-s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
...+|++++|+||+|.+|.+|+++|+... ... + ++++.++++.+++.+.+. +.++ .....|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~----~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS---DRLD----KNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh---hHhh----CChhhCCHHH
Confidence 34578899999999999989999999631 111 1 245667888887754332 1223 3345799999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSR 1488 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1488 (1510)
|||++|||||+++|++|||||||++||+++.+.+.+.|++..+++|||+++|+++.+.+ ||||++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999876 99999999999999999999
Q ss_pred HhcCC
Q 000438 1489 LLERP 1493 (1510)
Q Consensus 1489 Ll~~~ 1493 (1510)
+.+++
T Consensus 268 ~~~~~ 272 (286)
T PRK14275 268 LFTNP 272 (286)
T ss_pred HHhCC
Confidence 98765
No 297
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-38 Score=358.96 Aligned_cols=218 Identities=27% Similarity=0.440 Sum_probs=184.6
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCC-----CcEEEEcCeeCCC--CCHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS-----GGRIIIDGIDISL--LGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~-----~G~I~IDG~dI~~--i~l~ 1339 (1510)
-++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|. +|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 4789999999973 35999999999999999999999999999999999999874 8999999999875 3455
Q ss_pred HhhcceEEecCccccCcc-cHHHhcCC-C--CC-CCHHH----HHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1340 DLRSRFGIIPQEPVLFEG-TVRSNIDP-I--GQ-YSDEE----IWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~g-TIR~NLdp-~--~~-~sd~e----I~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
.+|++++|+||+|.+|.+ |+++|+.. . .. ..+++ +.+.++..++.+.+ ++.++.+ ..+||+|||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~----~~~LS~G~~ 154 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLKTP----ATGLSGGQQ 154 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhcCC----cccCCHHHH
Confidence 778899999999999875 99999952 1 11 12333 33345556554432 2233443 457999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
||++|||||+++|+||||||||++||..+...+.+.|++..+++|+|+++|+++.+.+ ||||++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 155 QRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667999999999999987 999999999999999999999
Q ss_pred hcCC
Q 000438 1490 LERP 1493 (1510)
Q Consensus 1490 l~~~ 1493 (1510)
++++
T Consensus 235 ~~~~ 238 (252)
T PRK14272 235 FTNP 238 (252)
T ss_pred HhCc
Confidence 8876
No 298
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6.7e-38 Score=347.87 Aligned_cols=201 Identities=60% Similarity=0.983 Sum_probs=181.5
Q ss_pred EEEeeeEEEccCCCC--ccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCeEEEEcCCCcCCCc
Q 000438 645 VEVRDGVFSWDDENG--EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGTTAYVAQTSWIQNG 722 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~--~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~iayv~Q~~~i~~~ 722 (1510)
++++|++++|++..+ +++|+|+||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|+++|++|+|.+++.
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~~ 80 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQNG 80 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhccC
Confidence 468999999964211 369999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCCh
Q 000438 723 TIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDA 802 (1510)
Q Consensus 723 Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~ 802 (1510)
|++||+.++..++.++..+..+.+++.+.+..+|.|.++.+++++.+||||||||++||||++++|+++||||||++||+
T Consensus 81 t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~ 160 (204)
T cd03250 81 TIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDA 160 (204)
T ss_pred cHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCH
Confidence 99999999876665566677778888888999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhh-cCCcEEEEEccCCCccccCCEEEEEeCCE
Q 000438 803 HTGSDIFKECVRGA-LKGKTIILVTHQVDFLHNVDLILVMREGM 845 (1510)
Q Consensus 803 ~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~~D~i~~l~~G~ 845 (1510)
+..+.+++.++... .+|+|+|++||+++.+..+|++++|++|+
T Consensus 161 ~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 161 HVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 99999987665433 45799999999999988899999999985
No 299
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.4e-38 Score=366.56 Aligned_cols=213 Identities=31% Similarity=0.550 Sum_probs=189.4
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.++++|++.+|..+ ..+|+||||+|++||.+|++||||||||||+++|.|++.|++|+|.++|.|...- ..+.|+++|
T Consensus 4 ~i~~~~l~k~~~~~-~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGGD-KTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCCC-CEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 47889999999842 3599999999999999999999999999999999999999999999999998765 678899999
Q ss_pred EecCccccCcc-cHHHhcCCCC---C----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1347 IIPQEPVLFEG-TVRSNIDPIG---Q----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~~---~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
|+||+|.+++. |++|||+.+. . ..++.+.+.++..+|.+.- +..+ ..||+|||||+.||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-------~~~~----~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-------NKKV----RTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-------Ccch----hhcCHHHHHHHHHHHH
Confidence 99999998866 9999997532 1 2356899999999998732 2222 3689999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-C-ceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-A-CTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1419 LLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~-~-~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
|+.+|++|||||||++||+.+...+.+.|++..+ + +||+++||.++.+.. ||||++|++|+++..|+++++.+.
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999999875 4 699999999999998 999999999999999999998654
No 300
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.2e-37 Score=354.15 Aligned_cols=218 Identities=32% Similarity=0.471 Sum_probs=187.2
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TTA 711 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ia 711 (1510)
|+++|+++.|+.. .+++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4689999999632 35799999999999999999999999999999999999999999999987 279
Q ss_pred EEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000438 712 YVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1510)
Q Consensus 712 yv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i 790 (1510)
|++|++++++.|++||+.++.+ .......+..+...+.+.++.++.+.++..+.++.+|||||||||+||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 9999999988999999998653 222233334445566666777877877778889999999999999999999999999
Q ss_pred EEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcchHH
Q 000438 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDFGA 864 (1510)
Q Consensus 791 ~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f~~ 864 (1510)
+||||||++||+...+.+.+.+.+. .+|+|+|++||+++++..||++++|++|++++.|+++++.+..+.+..
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~-~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~ 232 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDI-CAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAY 232 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHh-cCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHH
Confidence 9999999999999999998765544 468999999999999888999999999999999999998876554443
No 301
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-38 Score=351.95 Aligned_cols=200 Identities=26% Similarity=0.484 Sum_probs=173.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 478999999963 359999999999999999999999999999999999999999999999998753 56789999
Q ss_pred ecCccccCcc-cHHHhcCCCC---CC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFEG-TVRSNIDPIG---QY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~~---~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||++.+|.+ |+++|+.... .. .++++.++++..++.+..... ..+||+|||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~la~al 143 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANKR-----------VEELSKGNQQKVQFIAAV 143 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhCc-----------HhhCCHHHHHHHHHHHHH
Confidence 9999999875 9999985321 11 134567778888776554332 346899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|
T Consensus 144 ~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 144 IHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999998864 47899999999999876 9999999999999865
No 302
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.1e-37 Score=357.72 Aligned_cols=222 Identities=22% Similarity=0.362 Sum_probs=185.7
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC----CCcEEEEcCeeCCCCCHHHhh
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP----SGGRIIIDGIDISLLGLHDLR 1342 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep----~~G~I~IDG~dI~~i~l~~LR 1342 (1510)
.++++|++++| + .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..+
T Consensus 4 ~l~~~~l~~~~--~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA--A-QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe--c-cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 58999999999 2 3599999999999999999999999999999999999999 999999999998632 2234
Q ss_pred cceEEecCccc-cCc--ccHHHhcCC----CC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1343 SRFGIIPQEPV-LFE--GTVRSNIDP----IG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1343 ~~i~iIpQdp~-LF~--gTIR~NLdp----~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
++++|+||+|. .|. .|+.+|+.. .+ ...+++++++++.+++.+.. +.+......||+|||||++
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~--------~~~~~~~~~LS~Gq~qrv~ 150 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENAA--------RVLKLYPFEMSGGMLQRMM 150 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCChh--------hhhhcCCcccCHHHHHHHH
Confidence 67999999995 443 477777531 11 23456789999999886531 1223334579999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
|||||+++|+||||||||++||..+.+.+.+.|++..+ ++|||+++|+++.+.+ ||||++|++|++++.|+++++.+
T Consensus 151 laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 151 IALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999999998653 6899999999999976 99999999999999999999987
Q ss_pred CC-c-HHHHHHH
Q 000438 1492 RP-S-LFGALVQ 1501 (1510)
Q Consensus 1492 ~~-~-~f~~lv~ 1501 (1510)
++ . .++.++.
T Consensus 231 ~~~~~~~~~~~~ 242 (254)
T PRK10418 231 APKHAVTRSLVS 242 (254)
T ss_pred CCCCHHHHHHHH
Confidence 75 3 4554554
No 303
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=8.9e-38 Score=349.19 Aligned_cols=201 Identities=23% Similarity=0.420 Sum_probs=177.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+. +++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+.+.+ ..|+++++
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999963 468999999999999999999999999999999999999999999999987643 46788999
Q ss_pred ecCccccCcc-cHHHhcCC-CC-C-----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFEG-TVRSNIDP-IG-Q-----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp-~~-~-----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||+|.+|.+ |+++|+.. +. . ..++++.++++..++.+...+.|. +||+|||||++||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~G~~qrl~laral 143 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLPE-----------QLSGGQRQRVALARCL 143 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCcc-----------cCCHHHHHHHHHHHHH
Confidence 9999999875 99999952 21 1 134578889999999877666553 6899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecC
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGK 1485 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gs 1485 (1510)
+++|+|++|||||++||.++...+.+.|++..+ ++|+|+|||+++.+.+ ||+|++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999998653 7899999999999876 99999999999999874
No 304
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-38 Score=337.54 Aligned_cols=210 Identities=30% Similarity=0.434 Sum_probs=172.4
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------- 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 708 (1510)
..|+++|++..|++ ++.+|+||||+|++||+++|+|++||||||||++|.|..+|++|+|.++|
T Consensus 2 ~~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~ 79 (258)
T COG3638 2 MMIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKL 79 (258)
T ss_pred ceEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHH
Confidence 36899999999973 56899999999999999999999999999999999999999999999988
Q ss_pred --eEEEEcCCCcC-CCccHHHHHhcCCCCChhhHHHHHHH------hchHHHHHhcccCCcccccCCCCccChHHHHHHH
Q 000438 709 --TTAYVAQTSWI-QNGTIEENILFGLPMNRAKYGEVVRV------CCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 779 (1510)
Q Consensus 709 --~iayv~Q~~~i-~~~Tv~enI~fg~~~~~~~~~~v~~~------~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 779 (1510)
++||++|++.+ ...||.+|++.|.--...+++....- .....-++.+...+ ..-.+..+|||||+|||+
T Consensus 80 r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~--~A~qra~~LSGGQQQRVa 157 (258)
T COG3638 80 RRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILD--KAYQRASTLSGGQQQRVA 157 (258)
T ss_pred HHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHH--HHHHHhccCCcchhHHHH
Confidence 38999999865 67899999998864332222221100 00011122222222 234577899999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhh-cCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHH
Q 000438 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGA-LKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALL 856 (1510)
Q Consensus 780 LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~ 856 (1510)
|||||+++|+++|-|||+++|||.+++++++.+.+.. ..|.|+|+.-|++++.. +||||+-|++|+|+..|+.+|+-
T Consensus 158 IARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~ 236 (258)
T COG3638 158 IARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELT 236 (258)
T ss_pred HHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhh
Confidence 9999999999999999999999999999998777654 45899999999999975 59999999999999999998854
No 305
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=5.3e-38 Score=368.89 Aligned_cols=203 Identities=28% Similarity=0.477 Sum_probs=177.3
Q ss_pred EecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccC
Q 000438 1276 RYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLF 1355 (1510)
Q Consensus 1276 ~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF 1355 (1510)
+|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4542 359999999999999999999999999999999999999999999999999976 3456788999999999999
Q ss_pred cc-cHHHhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000438 1356 EG-TVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1510)
Q Consensus 1356 ~g-TIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILi 1427 (1510)
.+ |+++||.... ..+ ++++.++++.+++.+..... + .+||||||||++|||||+++|++|+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~----~~LSgG~~qrv~la~al~~~p~lll 147 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGEAADRP-------V----GTYSGGMRRRLDIAASLIHQPDVLF 147 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCc-------h----hhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 76 9999996421 122 34578889999886544332 2 3689999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1428 MDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1428 LDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
|||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 148 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 148 LDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999999999864 47899999999999986 999999999999999999998764
No 306
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=8e-38 Score=352.40 Aligned_cols=209 Identities=24% Similarity=0.362 Sum_probs=181.4
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.|+++|+++.|.. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5999999999963 35999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EecCccccCcccHHHhcCC----CCC-CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHcc
Q 000438 1347 IIPQEPVLFEGTVRSNIDP----IGQ-YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1510)
Q Consensus 1347 iIpQdp~LF~gTIR~NLdp----~~~-~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1421 (1510)
++||+|.+|+.|+++|+.. ... ..++++.++++..++.+.. ......+||+|||||++|||||++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTI----------LTKNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChHH----------hcCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999999999999963 111 1244566788888875321 122345799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhhcCEEEEEe-CCEEEEecChh
Q 000438 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVD-AGWAKEFGKPS 1487 (1510)
Q Consensus 1422 ~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~-~G~ivE~gsp~ 1487 (1510)
+|++|||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+..||+|++|+ ++..++.|+|+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999998643 789999999999998899999995 56666778875
No 307
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-37 Score=356.61 Aligned_cols=218 Identities=28% Similarity=0.408 Sum_probs=186.7
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcC------eeCCCCCHHH
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDG------IDISLLGLHD 1340 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG------~dI~~i~l~~ 1340 (1510)
.++++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+|| .|+.+.+...
T Consensus 10 ~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 10 VFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred heeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 5999999999964 4589999999999999999999999999999999999999996666654 6777777778
Q ss_pred hhcceEEecCccccCcc-cHHHhcCCC----CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1341 LRSRFGIIPQEPVLFEG-TVRSNIDPI----GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1341 LR~~i~iIpQdp~LF~g-TIR~NLdp~----~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
+|++++|+||+|.+|.+ |+++|+... +...+ +.+.++++..++.+.+.. .....+..||+||||
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~LS~G~~q 160 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYD-------RLNSPASQLSGGQQQ 160 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchh-------hhcCCcccCCHHHHH
Confidence 89999999999999976 999999621 11122 235677788887654311 122344579999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
|++||||++++|++|+|||||++||..+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 161 rl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~ 240 (257)
T PRK14246 161 RLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIF 240 (257)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999999987677999999999999965 9999999999999999999998
Q ss_pred cCC
Q 000438 1491 ERP 1493 (1510)
Q Consensus 1491 ~~~ 1493 (1510)
+++
T Consensus 241 ~~~ 243 (257)
T PRK14246 241 TSP 243 (257)
T ss_pred hCC
Confidence 766
No 308
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=6.5e-38 Score=350.47 Aligned_cols=200 Identities=31% Similarity=0.515 Sum_probs=173.8
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCC--CCHHHhhcce
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISL--LGLHDLRSRF 1345 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~--i~l~~LR~~i 1345 (1510)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 478999999964 359999999999999999999999999999999999999999999999999853 3456678899
Q ss_pred EEecCccccCc-ccHHHhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHH
Q 000438 1346 GIIPQEPVLFE-GTVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1346 ~iIpQdp~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1416 (1510)
+|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+.....| .+||+|||||++||
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la 147 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYP-----------AQLSGGQQQRVAIA 147 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCc-----------cccCHHHHHHHHHH
Confidence 99999999886 5999999642 1222 235677788888766554443 46899999999999
Q ss_pred HHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEE
Q 000438 1417 RVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWA 1480 (1510)
Q Consensus 1417 RALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~i 1480 (1510)
||++++|++|||||||++||+++.+.+.+.|++.. .++|||+++|+++.+.+ ||+|++|++|++
T Consensus 148 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 148 RALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999864 47899999999999976 999999999975
No 309
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.1e-37 Score=355.02 Aligned_cols=220 Identities=25% Similarity=0.425 Sum_probs=183.0
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCee-----CCCCCHHH-
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGID-----ISLLGLHD- 1340 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~d-----I~~i~l~~- 1340 (1510)
-++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5899999999964 359999999999999999999999999999999999999999999999999 87776654
Q ss_pred ---hhcceEEecCccc--cC-cccHHHhcC----CCCCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCC
Q 000438 1341 ---LRSRFGIIPQEPV--LF-EGTVRSNID----PIGQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWS 1406 (1510)
Q Consensus 1341 ---LR~~i~iIpQdp~--LF-~gTIR~NLd----p~~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1406 (1510)
.|+.++|+||+|. ++ ..|+++|+. .+.... ++++.++++..++.+ +.....+.+||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS 153 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDA----------ARIDDLPTTFS 153 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCCh----------hHHhCCCccCC
Confidence 3567999999984 33 347888874 122111 234555666665532 12334456899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000438 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1407 ~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1483 (1510)
+|||||++|||||+++|+||||||||++||+++.+.+.+.|++..+ +.|||+|||+++.+.+ ||+|++|++|++++.
T Consensus 154 ~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~ 233 (258)
T PRK11701 154 GGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVES 233 (258)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999987643 7899999999999986 999999999999999
Q ss_pred cChhHHhcCC-cHHHH
Q 000438 1484 GKPSRLLERP-SLFGA 1498 (1510)
Q Consensus 1484 gsp~~Ll~~~-~~f~~ 1498 (1510)
|+++++..++ ..|.+
T Consensus 234 ~~~~~~~~~~~~~~~~ 249 (258)
T PRK11701 234 GLTDQVLDDPQHPYTQ 249 (258)
T ss_pred CCHHHHhcCCCCHHHH
Confidence 9999998766 44443
No 310
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=6.2e-37 Score=397.26 Aligned_cols=110 Identities=19% Similarity=0.290 Sum_probs=96.6
Q ss_pred Cccc-cccCCCCCCChhHHHHHHHHHHHccCC---CEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhh
Q 000438 1393 KLDS-LVADSGDNWSVGQRQLLCLGRVMLKHS---RLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVM 1467 (1510)
Q Consensus 1393 gLdt-~v~e~G~nLS~GQrQrl~LARALLr~~---kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~ 1467 (1510)
||+. .++.....||||||||+.|||+|+++| +++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 5554 356667789999999999999999999 9999999999999999999999998864 4789999999999999
Q ss_pred hcCEEEEE------eCCEEEEecChhHHhcCC-cHHHHHHHH
Q 000438 1468 DCDRVIVV------DAGWAKEFGKPSRLLERP-SLFGALVQE 1502 (1510)
Q Consensus 1468 ~~DrIlVL------~~G~ivE~gsp~~Ll~~~-~~f~~lv~~ 1502 (1510)
.||+|++| ++|+|++.|+|+++.+++ +.=++..+.
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~~~s~t~~~l~~ 939 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKVEASYTGRYLKP 939 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhCcccHHHHHHHH
Confidence 99999999 799999999999999877 554454444
No 311
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.5e-37 Score=351.74 Aligned_cols=213 Identities=32% Similarity=0.513 Sum_probs=185.5
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TTA 711 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ia 711 (1510)
++++|+++.|++..++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4688999999643335799999999999999999999999999999999999999999999987 289
Q ss_pred EEcCCCcCCCccHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000438 712 YVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1510)
Q Consensus 712 yv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i 790 (1510)
|++|++.+++.|++||+.++... ..+...+..+.+.+.+.+..++.|.++..+....+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999998888999999987543 22333445566677777778888888888888999999999999999999999999
Q ss_pred EEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000438 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 791 ~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
+||||||++||++..+.+.+.+.... +|+|+|++||++++++.||++++|++|++++.|+.+++.+.
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 99999999999999999887665444 78999999999999888999999999999999998887654
No 312
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-37 Score=356.77 Aligned_cols=211 Identities=22% Similarity=0.340 Sum_probs=185.0
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCC--------CcEEEEcCeeCCCCCHH
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS--------GGRIIIDGIDISLLGLH 1339 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~--------~G~I~IDG~dI~~i~l~ 1339 (1510)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRH--RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECC--EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 689999999964 35999999999999999999999999999999999999998 99999999999888888
Q ss_pred HhhcceEEecCccc-cCcccHHHhcCCCC--------CC---CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCCh
Q 000438 1340 DLRSRFGIIPQEPV-LFEGTVRSNIDPIG--------QY---SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSV 1407 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~-LF~gTIR~NLdp~~--------~~---sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~ 1407 (1510)
.+|+.++++||++. +|..|+++|+.... .. .++.++++++..++.+... .....||+
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSg 148 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVG-----------RDVTTLSG 148 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCH
Confidence 88889999999986 57889999995321 11 1345778888888765432 23357999
Q ss_pred hHHHHHHHHHHHc---------cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEE
Q 000438 1408 GQRQLLCLGRVML---------KHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVV 1475 (1510)
Q Consensus 1408 GQrQrl~LARALL---------r~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL 1475 (1510)
|||||++|||||+ .+|++|||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|
T Consensus 149 G~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l 228 (272)
T PRK13547 149 GELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAML 228 (272)
T ss_pred HHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEE
Confidence 9999999999999 59999999999999999999999999998653 6899999999999975 9999999
Q ss_pred eCCEEEEecChhHHhc
Q 000438 1476 DAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1476 ~~G~ivE~gsp~~Ll~ 1491 (1510)
++|++++.|+++++++
T Consensus 229 ~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 229 ADGAIVAHGAPADVLT 244 (272)
T ss_pred ECCeEEEecCHHHHcC
Confidence 9999999999999875
No 313
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.3e-37 Score=355.17 Aligned_cols=212 Identities=21% Similarity=0.238 Sum_probs=178.8
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccc--CCCCcEEEEcCeeCCCCCHHHh-hcc
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLV--EPSGGRIIIDGIDISLLGLHDL-RSR 1344 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--ep~~G~I~IDG~dI~~i~l~~L-R~~ 1344 (1510)
|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 578999999963 35999999999999999999999999999999999994 7999999999999988877664 456
Q ss_pred eEEecCccccCcc-cHHHhcCCC----CC------CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhH
Q 000438 1345 FGIIPQEPVLFEG-TVRSNIDPI----GQ------YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1345 i~iIpQdp~LF~g-TIR~NLdp~----~~------~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
++++||+|.+|.+ |+++|+... .. .+ ++++.++++..++.+.. ++..+. ..||+||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~---~~LS~G~ 149 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEF------LNRSVN---EGFSGGE 149 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhh------cccccc---cCcCHHH
Confidence 9999999999876 899998421 10 11 24567777777775321 122221 2499999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh--cCEEEEEeCCEEEEecCh
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD--CDRVIVVDAGWAKEFGKP 1486 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~--~DrIlVL~~G~ivE~gsp 1486 (1510)
|||++|||||+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|++
T Consensus 150 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (243)
T TIGR01978 150 KKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDV 229 (243)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCH
Confidence 999999999999999999999999999999999999999864 46899999999999986 799999999999999999
Q ss_pred hHHh
Q 000438 1487 SRLL 1490 (1510)
Q Consensus 1487 ~~Ll 1490 (1510)
++.-
T Consensus 230 ~~~~ 233 (243)
T TIGR01978 230 ELAK 233 (243)
T ss_pred HHhc
Confidence 8543
No 314
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-37 Score=369.27 Aligned_cols=210 Identities=25% Similarity=0.407 Sum_probs=185.8
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCC----CHHHhhc
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLL----GLHDLRS 1343 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~~LR~ 1343 (1510)
+++ |++++|.. . .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... .....|+
T Consensus 2 l~~-~l~k~~~~--~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGD--L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCC--E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 566 89999964 2 23 99999999999999999999999999999999999999999999998753 2445688
Q ss_pred ceEEecCccccCc-ccHHHhcCCC-CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHcc
Q 000438 1344 RFGIIPQEPVLFE-GTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1510)
Q Consensus 1344 ~i~iIpQdp~LF~-gTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1421 (1510)
+++|+||++.+|. .|+++|+... ....++++.++++.+++.+.....| .+||||||||++|||||++
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRYP-----------GSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCCc-----------ccCCHHHHHHHHHHHHHHc
Confidence 9999999999996 5999999732 2345677889999999877666554 3689999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1422 ~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
+|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p 220 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASS 220 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCc
Confidence 9999999999999999999999999998654 6899999999999877 9999999999999999999999887
No 315
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.5e-37 Score=355.45 Aligned_cols=210 Identities=22% Similarity=0.375 Sum_probs=182.2
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCC---CcEEEEcCeeCCCCC-----H
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS---GGRIIIDGIDISLLG-----L 1338 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~---~G~I~IDG~dI~~i~-----l 1338 (1510)
-++++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+ .
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 4899999999963 35999999999999999999999999999999999999986 499999999987542 4
Q ss_pred HHhhcceEEecCccccCcc-cHHHhcCCCC---------------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCC
Q 000438 1339 HDLRSRFGIIPQEPVLFEG-TVRSNIDPIG---------------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSG 1402 (1510)
Q Consensus 1339 ~~LR~~i~iIpQdp~LF~g-TIR~NLdp~~---------------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G 1402 (1510)
..+|++++|+||++.+|.+ |+++|+.... ...++++.++++..++.+..... .
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~ 150 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQR-----------V 150 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCC-----------c
Confidence 5678899999999998874 9999996210 11234678888888887655433 2
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCE
Q 000438 1403 DNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGW 1479 (1510)
Q Consensus 1403 ~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1510)
.+||+|||||++|||||+.+|++|||||||++||.++.+.+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~ 230 (262)
T PRK09984 151 STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGH 230 (262)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 4689999999999999999999999999999999999999999999865 37899999999998765 99999999999
Q ss_pred EEEecChhHH
Q 000438 1480 AKEFGKPSRL 1489 (1510)
Q Consensus 1480 ivE~gsp~~L 1489 (1510)
+++.|+++++
T Consensus 231 i~~~g~~~~~ 240 (262)
T PRK09984 231 VFYDGSSQQF 240 (262)
T ss_pred EEEeCCHHHh
Confidence 9999999996
No 316
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-37 Score=352.97 Aligned_cols=201 Identities=22% Similarity=0.315 Sum_probs=174.7
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +.+++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 689999999964 3599999999999999999999999999999999999999999999999998642 346899
Q ss_pred ecCccccCc-ccHHHhcCCC---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFE-GTVRSNIDPI---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
+||+|.+|. .|+++|+... .... ++++.++++..++.+.....| .+||||||||++|||||
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qrl~laral 143 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKRYI-----------WQLSGGQRQRVGIARAL 143 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 999999887 5999999632 1122 345778888888876544332 46899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEe--CCEEEEecCh
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVD--AGWAKEFGKP 1486 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~--~G~ivE~gsp 1486 (1510)
+++|++|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|+ +|++++.+++
T Consensus 144 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 144 AANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999999999999863 37999999999999876 99999998 5999998754
No 317
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.4e-37 Score=347.03 Aligned_cols=215 Identities=34% Similarity=0.535 Sum_probs=187.2
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------EE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------TA 711 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------ia 711 (1510)
++++|++++|+. ++++++|+||+|++|++++|+|+||||||||+++|+|+.+|++|+|.++|. ++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 468899999953 246999999999999999999999999999999999999999999999872 79
Q ss_pred EEcCCCcCCCccHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000438 712 YVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1510)
Q Consensus 712 yv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i 790 (1510)
|++|++++++.|++||+.++.+. ......+..+.+.+.+.+..++.|.++.++.++.+||||||||++||||++.+|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987542 22333445666778788888888888888889999999999999999999999999
Q ss_pred EEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCcch
Q 000438 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGMDF 862 (1510)
Q Consensus 791 ~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~~f 862 (1510)
+||||||++||+++.+.+.+.+.... +|+|+|++||+.+.+..||++++|++|++++.|+.+++.+....+
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~ 229 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVS-KGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLY 229 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHH
Confidence 99999999999999999887655443 489999999999998889999999999999999988877654433
No 318
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.1e-37 Score=347.15 Aligned_cols=214 Identities=35% Similarity=0.546 Sum_probs=186.4
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------EE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------TA 711 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------ia 711 (1510)
|+++|++++|++. ++++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4689999999632 236999999999999999999999999999999999999999999999872 79
Q ss_pred EEcCCCcCCCccHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000438 712 YVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1510)
Q Consensus 712 yv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i 790 (1510)
|++|++++++.|++||+.++.+. ......+..+.+.+.+.++.++.|..+..+.++.+||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999889999999987542 33344555566677788888887877888889999999999999999999999999
Q ss_pred EEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhcCc
Q 000438 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNSGM 860 (1510)
Q Consensus 791 ~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~~~ 860 (1510)
+||||||++||+.+.+.+.+.+.+ ..+++|+|++||+++.++.||++++|++|++++.|+++++.+...
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~-~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~ 228 (234)
T cd03251 160 LILDEATSALDTESERLVQAALER-LMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGG 228 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHH-hcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCc
Confidence 999999999999999988765544 346899999999999988899999999999999999988865543
No 319
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-37 Score=345.43 Aligned_cols=211 Identities=32% Similarity=0.509 Sum_probs=186.1
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1510)
.++++|++++|+. .+++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 4789999999963 24699999999999999999999999999999999999999999999987 27
Q ss_pred EEEcCCCcCCCccHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000438 711 AYVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1510)
Q Consensus 711 ayv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~ 789 (1510)
+|++|+++++..|++||+.++.+. ......+.++.+.+...++.++.|..+..+.+..+|||||||||+||||++++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 999999998888999999987543 2334455566677888888888888888888999999999999999999999999
Q ss_pred EEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHh
Q 000438 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 790 i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
++||||||++||+.+.+.+++.+.+. .+++|+|++||+++.++.||++++|++|++++.|+++++.+
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~-~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKL-MKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHh-cCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999988665443 46899999999999988899999999999999999887754
No 320
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-37 Score=343.33 Aligned_cols=202 Identities=31% Similarity=0.507 Sum_probs=173.6
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1510)
.++++|++|+|++. .++|+|+|++|++|+.++|+|+||||||||++.+.|.++|++|.|.++|.
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 57899999999754 68999999999999999999999999999999999999999999998773
Q ss_pred EEEEcCCC--cCCCccHHHHHhcCCCC---Chh----hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHH
Q 000438 710 TAYVAQTS--WIQNGTIEENILFGLPM---NRA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 710 iayv~Q~~--~i~~~Tv~enI~fg~~~---~~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1510)
+|||+|+| .++..||.|.|.||... .++ +.+++++.|++... ......+|||||||||+|
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~-----------~~r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEEL-----------LDRPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhh-----------ccCCccccCCcceeeHHh
Confidence 89999999 57789999999999653 222 22233333333322 345678999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
|.+|+.+|+++|||||||+||+...+.+.+.+.+...+ |+|+|++|||++.+.. ||++++|++|+++.+|+++++.+.
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 99999999999999999999999999999877666555 6999999999999876 999999999999999999888753
No 321
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=8.3e-37 Score=343.95 Aligned_cols=204 Identities=26% Similarity=0.434 Sum_probs=179.5
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... . ++++++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~---~-~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRK---D-LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccc---c-cccEEE
Confidence 478999999974 3599999999999999999999999999999999999999999999999987532 2 357999
Q ss_pred ecCccccCc-ccHHHhcCC---CCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000438 1348 IPQEPVLFE-GTVRSNIDP---IGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1510)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp---~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1423 (1510)
+||++.+|. .|+++|+.. ....+++++.++++..++.+.....+ .+||+|||||++||||++++|
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~~rv~laral~~~p 143 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGKKKA-----------KQFSLGMKQRLGIAIALLNHP 143 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHhhhH-----------hhCCHHHHHHHHHHHHHhcCC
Confidence 999998886 599999963 12345678899999999987654432 368999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000438 1424 RLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSR 1488 (1510)
Q Consensus 1424 kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1488 (1510)
++|+|||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||||++|++|++++.|++.+
T Consensus 144 ~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 144 KLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999999999864 47899999999999865 99999999999999999875
No 322
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=8.9e-37 Score=352.63 Aligned_cols=221 Identities=27% Similarity=0.400 Sum_probs=184.4
Q ss_pred eEEEEEEEEEecCC-------CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHH
Q 000438 1267 NVDLIDLQVRYRSN-------TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~-------~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~ 1339 (1510)
-|+++||+++|+.+ ..++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38899999999741 34699999999999999999999999999999999999999999999999999887653
Q ss_pred ---HhhcceEEecCccc--cC-cccHHHhcCC-C---CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCC
Q 000438 1340 ---DLRSRFGIIPQEPV--LF-EGTVRSNIDP-I---GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNW 1405 (1510)
Q Consensus 1340 ---~LR~~i~iIpQdp~--LF-~gTIR~NLdp-~---~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1405 (1510)
.+|++++++||+|. ++ ..|+++|+.. . ...+ ++.+.++++..++... ........|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~----------~~~~~~~~L 152 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDS----------VLDKRPPQL 152 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChh----------HhhCCCccC
Confidence 46889999999983 43 4699999742 1 1111 2245566666665421 122344579
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000438 1406 SVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKE 1482 (1510)
Q Consensus 1406 S~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE 1482 (1510)
|+|||||++|||||+++|+||||||||++||.++...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++
T Consensus 153 S~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~ 232 (268)
T PRK10419 153 SGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVE 232 (268)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEee
Confidence 99999999999999999999999999999999999999999998643 7899999999999986 99999999999999
Q ss_pred ecChhHHhcCCcHHH
Q 000438 1483 FGKPSRLLERPSLFG 1497 (1510)
Q Consensus 1483 ~gsp~~Ll~~~~~f~ 1497 (1510)
.|+++++....+.|.
T Consensus 233 ~g~~~~~~~~~~~~~ 247 (268)
T PRK10419 233 TQPVGDKLTFSSPAG 247 (268)
T ss_pred eCChhhccCCCCHHH
Confidence 999999986555444
No 323
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-37 Score=331.42 Aligned_cols=171 Identities=42% Similarity=0.749 Sum_probs=161.8
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+...+.+++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 47899999997543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred ecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000438 1348 IPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1510)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILi 1427 (1510)
+||+|.+|++|+++|+ ||+|||||++||||++++|++|+
T Consensus 81 ~~~~~~~~~~t~~e~l-----------------------------------------LS~G~~~rl~la~al~~~p~lll 119 (171)
T cd03228 81 VPQDPFLFSGTIRENI-----------------------------------------LSGGQRQRIAIARALLRDPPILI 119 (171)
T ss_pred EcCCchhccchHHHHh-----------------------------------------hCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 89999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCCE
Q 000438 1428 MDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGW 1479 (1510)
Q Consensus 1428 LDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G~ 1479 (1510)
|||||++||+++.+.+.+.|++..+++|+|+++|+++.+..||++++|++|+
T Consensus 120 lDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 120 LDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 9999999999999999999998767799999999999998899999999985
No 324
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.3e-36 Score=349.35 Aligned_cols=215 Identities=25% Similarity=0.376 Sum_probs=190.3
Q ss_pred CccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000438 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1510)
...|+++|++++|+.. ...+|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 17 ~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 17 GGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 3579999999999642 24699999999999999999999999999999999999999999999987
Q ss_pred eEEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000438 709 TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1510)
Q Consensus 709 ~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~ 788 (1510)
.++|++|++++++.|++||+........+...+.++...+.+.++.+|.|.++.+++++.+||||||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 37999999999999999999765433344455666777888888889889999999999999999999999999999999
Q ss_pred CEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000438 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 789 ~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
+++||||||++||+++.+.+++.+. ...+++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~-~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 244 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVM-TAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQ 244 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHH-HhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhc
Confidence 9999999999999999888876544 34568999999999999888999999999999999999988764
No 325
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=3.3e-37 Score=346.35 Aligned_cols=202 Identities=27% Similarity=0.392 Sum_probs=177.0
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHH---Hhh
Q 000438 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH---DLR 1342 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR 1342 (1510)
++++|++++|+++. ..+|+|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++..++.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999997532 4699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cceEEecCccccCc-ccHHHhcCCCC----CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHH
Q 000438 1343 SRFGIIPQEPVLFE-GTVRSNIDPIG----QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1510)
Q Consensus 1343 ~~i~iIpQdp~LF~-gTIR~NLdp~~----~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl 1413 (1510)
++++++||+|.+|. .|+.+|+.... ..+ ++++.++++++++.+.....| .+||+|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP-----------HNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHH
Confidence 89999999999987 69999996321 222 235777888888877666655 36899999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhhcCEEEEEeCCEE
Q 000438 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMDCDRVIVVDAGWA 1480 (1510)
Q Consensus 1414 ~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~~DrIlVL~~G~i 1480 (1510)
+|||||+++|++|+|||||++||+++.+.+.+.|++..+ ++|+|+|+|+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999988753 7999999999997766999999999986
No 326
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-37 Score=326.82 Aligned_cols=216 Identities=27% Similarity=0.469 Sum_probs=185.3
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH-hhcce
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD-LRSRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i 1345 (1510)
-++++|++..|.+ -.+|+||||++++||.++++||||+|||||+++|+|+.+|.+|+|.++|.||...+.|+ .|..|
T Consensus 3 mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 3789999999986 35999999999999999999999999999999999999999999999999999999998 57789
Q ss_pred EEecCccccCcc-cHHHhcCCCC-C-----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDPIG-Q-----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~-~-----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
++|||...+|.. ||.|||.... . ..+..+.++.+.. | -|.......+.+|||||+|-++||||
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~~~e~v~~lF---------P-~Lker~~~~aG~LSGGEQQMLAiaRA 150 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQERDLEEVYELF---------P-RLKERRNQRAGTLSGGEQQMLAIARA 150 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccccccccccHHHHHHHC---------h-hHHHHhcCcccCCChHHHHHHHHHHH
Confidence 999999999966 9999996321 1 1111133333322 2 23333344566899999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCCc
Q 000438 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERPS 1494 (1510)
Q Consensus 1419 LLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~ 1494 (1510)
|+.+||+|+|||||.+|-|.--+.|.++|++..+ +-||+.|-++.....+ +||.+||++|+|+..|++++|++++.
T Consensus 151 Lm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~~ 229 (237)
T COG0410 151 LMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADPD 229 (237)
T ss_pred HhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCHH
Confidence 9999999999999999999999999999999874 4599999999998876 99999999999999999999999863
No 327
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-37 Score=331.09 Aligned_cols=170 Identities=34% Similarity=0.613 Sum_probs=157.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+ .++|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGK--KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 478999999974 25999999999999999999999999999999999999999999999999998765 677889999
Q ss_pred ecCccccCcc-cHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 000438 1348 IPQEPVLFEG-TVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLL 1426 (1510)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kIL 1426 (1510)
+||+|.+|.+ |+++|+. ||+|||||++|||||+++|+||
T Consensus 78 ~~q~~~~~~~~tv~~~~~----------------------------------------LS~G~~qrv~laral~~~p~il 117 (173)
T cd03230 78 LPEEPSLYENLTVRENLK----------------------------------------LSGGMKQRLALAQALLHDPELL 117 (173)
T ss_pred EecCCccccCCcHHHHhh----------------------------------------cCHHHHHHHHHHHHHHcCCCEE
Confidence 9999999887 9999973 8999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEE
Q 000438 1427 FMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWA 1480 (1510)
Q Consensus 1427 iLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~i 1480 (1510)
+|||||++||..+.+.+.+.|++.. ++.|+|+++|+.+.+.+ ||+|++|++|++
T Consensus 118 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 118 ILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 9999999999999999999999865 35899999999999985 999999999974
No 328
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=8.2e-37 Score=365.62 Aligned_cols=207 Identities=27% Similarity=0.431 Sum_probs=180.2
Q ss_pred EEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCC----HHHhhcceEE
Q 000438 1272 DLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG----LHDLRSRFGI 1347 (1510)
Q Consensus 1272 ~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~----l~~LR~~i~i 1347 (1510)
|++++|.. . .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ....|+++++
T Consensus 4 ~l~~~~~~--~-~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGD--F-SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECC--E-EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 78999964 2 25 999999999999999999999999999999999999999999999987542 3456888999
Q ss_pred ecCccccCcc-cHHHhcCCC-CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHcc
Q 000438 1348 IPQEPVLFEG-TVRSNIDPI-GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1510)
Q Consensus 1348 IpQdp~LF~g-TIR~NLdp~-~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1421 (1510)
+||+|.+|.+ |+++|+... .... ++++.++++..+|.+.....| .+||||||||++|||||++
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGqkqRvalAraL~~ 148 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLLGRLP-----------GRLSGGEKQRVAIGRALLS 148 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHhcCCh-----------hhCCHHHHHHHHHHHHHHc
Confidence 9999999976 999999632 1111 234778888888876655444 4689999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1422 ~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
+|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++
T Consensus 149 ~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 223 (354)
T TIGR02142 149 SPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASP 223 (354)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCc
Confidence 9999999999999999999999999998653 6899999999999976 9999999999999999999999877
No 329
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-37 Score=331.81 Aligned_cols=172 Identities=35% Similarity=0.558 Sum_probs=159.2
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCC--HHHhhcce
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLG--LHDLRSRF 1345 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~--l~~LR~~i 1345 (1510)
|+++|++++|+. .++++|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ....|+.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 35999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred EEecCccccCcc-cHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~k 1424 (1510)
+|+||+|.+|.+ |+++|+... ||+|||||++|||||+++|+
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~--------------------------------------lS~G~~qr~~la~al~~~p~ 120 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG--------------------------------------LSGGQQQRVALARALAMDPD 120 (178)
T ss_pred EEEecCCccCCCCCHHHheeec--------------------------------------CCHHHHHHHHHHHHHHCCCC
Confidence 999999998865 999999642 89999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCE
Q 000438 1425 LLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGW 1479 (1510)
Q Consensus 1425 ILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ 1479 (1510)
+++|||||++||+.+...+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 121 llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 121 VLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999999999999999998654 5899999999999986 99999999985
No 330
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4.4e-37 Score=313.08 Aligned_cols=198 Identities=29% Similarity=0.429 Sum_probs=165.1
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EEEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TAYV 713 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------iayv 713 (1510)
+.++++.|+|+... =..+++|+.||++||+||+||||||||+.|+|...|.+|+|.++|. ++++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSml 76 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSML 76 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhh
Confidence 56778999996421 2578999999999999999999999999999999999999999983 7899
Q ss_pred cCCCcCC-CccHHHHHhcCCC----CC---hhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHh
Q 000438 714 AQTSWIQ-NGTIEENILFGLP----MN---RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1510)
Q Consensus 714 ~Q~~~i~-~~Tv~enI~fg~~----~~---~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~ 785 (1510)
+|+..+| ..||++||-+|.. .+ +++.+.+....++...++ ..+.+|||||||||+|||++.
T Consensus 77 FQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~-----------RLP~~LSGGqRQRvALARclv 145 (231)
T COG3840 77 FQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLK-----------RLPGELSGGQRQRVALARCLV 145 (231)
T ss_pred hhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhh-----------hCccccCchHHHHHHHHHHHh
Confidence 9999888 5799999999964 22 233344444445544444 345679999999999999999
Q ss_pred cCCCEEEEeCccCCCChhHHHHHHHHHHhhh-cCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000438 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGA-LKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 786 ~~~~i~lLDep~salD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
++.+|+|||||||||||.-+.++...+.... .++.|+++|||+++.+.. +|+++++++|+|.++|+.++++..
T Consensus 146 R~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 146 REQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred ccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 9999999999999999999998876554433 468899999999999865 999999999999999999988754
No 331
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=1.4e-36 Score=346.90 Aligned_cols=207 Identities=28% Similarity=0.422 Sum_probs=180.4
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
-++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +.+++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 4899999999974 3599999999999999999999999999999999999999999999987 35799
Q ss_pred EecCccccCc---ccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000438 1347 IIPQEPVLFE---GTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1510)
Q Consensus 1347 iIpQdp~LF~---gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1423 (1510)
|+||+|.++. .|+++|+......+++++.++++.+++.+.....+ ..||+|||||++|||||+++|
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qrv~laral~~~p 139 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHLIDAPM-----------QKLSGGETQRVLLARALLNRP 139 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHHHhCCh-----------hhCCHHHHHHHHHHHHHhcCC
Confidence 9999998765 48999975433456788999999999987665432 468999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCCcHHHHH
Q 000438 1424 RLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERPSLFGAL 1499 (1510)
Q Consensus 1424 kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~~f~~l 1499 (1510)
++|+|||||++||+.+...+.+.|++..+ ++|||+|||+++.+.. ||+|++|++ ++++.|+++++.++ ..|.++
T Consensus 140 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~~-~~~~~~ 216 (251)
T PRK09544 140 QLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSLH-PEFISM 216 (251)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhCC-HHHHHH
Confidence 99999999999999999999999987643 7899999999999976 999999964 79999999998754 344444
No 332
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7e-38 Score=324.00 Aligned_cols=215 Identities=27% Similarity=0.472 Sum_probs=185.6
Q ss_pred ceEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH-hhcc
Q 000438 1266 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD-LRSR 1344 (1510)
Q Consensus 1266 g~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~ 1344 (1510)
+.+..+|+..+|... .|+++|||++++||.||+.||+||||||.+.++.|++.|++|+|.+||.||+.++.+. -|-.
T Consensus 3 ~~L~a~~l~K~y~kr--~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKKR--KVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCCe--eeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 467888999999753 5999999999999999999999999999999999999999999999999999999988 4667
Q ss_pred eEEecCccccCcc-cHHHhcCCCCCC---------CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1345 FGIIPQEPVLFEG-TVRSNIDPIGQY---------SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1345 i~iIpQdp~LF~g-TIR~NLdp~~~~---------sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
|||+||||.+|.+ ||++||...-+. ..+++.+.|+..++...-. ..|..||||||+|+-
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~-----------~~a~sLSGGERRR~E 149 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRD-----------SKAYSLSGGERRRVE 149 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhc-----------CcccccccchHHHHH
Confidence 9999999999987 999999632221 1233556666666654322 235589999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhh-hhhcCEEEEEeCCEEEEecChhHHhcC
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPT-VMDCDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~t-i~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
|||||..+|+.++||||.|++||-+-..||+.|+... ++--|++.-|...+ +.-|||.+++.+|+|...|+|+++++|
T Consensus 150 IARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 150 IARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred HHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 9999999999999999999999999999999998865 46679999999865 555999999999999999999999998
Q ss_pred C
Q 000438 1493 P 1493 (1510)
Q Consensus 1493 ~ 1493 (1510)
+
T Consensus 230 ~ 230 (243)
T COG1137 230 E 230 (243)
T ss_pred h
Confidence 6
No 333
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=1.2e-36 Score=336.33 Aligned_cols=185 Identities=25% Similarity=0.324 Sum_probs=163.9
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcc--cCCCCcEEEEcCeeCCCCCHHHh-hcc
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRL--VEPSGGRIIIDGIDISLLGLHDL-RSR 1344 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl--~ep~~G~I~IDG~dI~~i~l~~L-R~~ 1344 (1510)
++++|++++|+. .++++|+||+|++||++||+|++|||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999973 3599999999999999999999999999999999999 58999999999999998876654 556
Q ss_pred eEEecCccccCcc-cHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000438 1345 FGIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1510)
Q Consensus 1345 i~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1423 (1510)
++|+||+|.+|.+ |+++|++ .. ..+||+|||||++||||++++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l~------------------------~~-----------~~~LS~G~~qrv~laral~~~p 123 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFLR------------------------YV-----------NEGFSGGEKKRNEILQLLLLEP 123 (200)
T ss_pred EEEeecChhhccCccHHHHHh------------------------hc-----------cccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999876 5666550 00 1369999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHcC-CceEEEEecChhhhh--hcCEEEEEeCCEEEEecChhHHh
Q 000438 1424 RLLFMDEATASVDSQTDAEIQRIIREEFA-ACTIISIAHRIPTVM--DCDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1424 kILiLDEaTsslD~~Td~~Iq~~I~~~f~-~~TvI~IAHRl~ti~--~~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
+||+|||||++||+.+...+.+.|++..+ ++|+|++||+++.+. .||+|++|++|++++.| +.++.
T Consensus 124 ~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 124 DLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 99999999999999999999999998643 789999999999998 59999999999999999 56565
No 334
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.1e-36 Score=340.25 Aligned_cols=206 Identities=30% Similarity=0.396 Sum_probs=183.2
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1510)
.++++|++++|+.. ++++|+|+||++++||+++|+|+||||||||+++|+|+.+|++|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 2 DIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred cEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 47899999999642 34799999999999999999999999999999999999999999999987 37
Q ss_pred EEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000438 711 AYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1510)
Q Consensus 711 ayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i 790 (1510)
+|++|++.+++.|++||+.+......++..+.++..++.+.+..++.|.++..++++.+||||||||++||||++.+|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999988999999987655555555566677788888888899999999999999999999999999999999999
Q ss_pred EEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecC
Q 000438 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGR 851 (1510)
Q Consensus 791 ~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~ 851 (1510)
+||||||++||+.+++.+.+.+.+ ..+++|+|++||+++.++.||++++|++|++++.|+
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIRE-AFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 999999999999999988765544 345789999999999998899999999999988765
No 335
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=363.17 Aligned_cols=206 Identities=26% Similarity=0.409 Sum_probs=171.0
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EEE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TAY 712 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------iay 712 (1510)
.++++|++++|+. +.++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. +||
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 80 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAM 80 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 4889999999942 357999999999999999999999999999999999999999999999883 899
Q ss_pred EcCCCcCC-CccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000438 713 VAQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1510)
Q Consensus 713 v~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~ 788 (1510)
|+|++.++ +.||+|||.|+... .....++ ...+-++.+.. ......+..+|||||||||+|||||+.+|
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~~gL--~~~~~~~~~~LSgGq~QRvalARAL~~~P 153 (356)
T PRK11650 81 VFQNYALYPHMSVRENMAYGLKIRGMPKAEIEE-----RVAEAARILEL--EPLLDRKPRELSGGQRQRVAMGRAIVREP 153 (356)
T ss_pred EeCCccccCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHcCC--hhHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999887 57999999998542 1111111 11122222222 22345677899999999999999999999
Q ss_pred CEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000438 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 789 ~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
+++|||||||+||+.+++.+.+.+.+...+ |.|+|+|||+.+++. .||+|++|++|++++.|+++++.+.
T Consensus 154 ~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 154 AVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 999999999999999999998776654443 899999999999875 5999999999999999999998764
No 336
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.6e-36 Score=346.61 Aligned_cols=220 Identities=24% Similarity=0.401 Sum_probs=182.2
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCee-----CCCCCHHH-
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGID-----ISLLGLHD- 1340 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~d-----I~~i~l~~- 1340 (1510)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +..++..+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGG--GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCC--ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 4899999999974 348999999999999999999999999999999999999999999999988 77666543
Q ss_pred ---hhcceEEecCccc--c-CcccHHHhcC----CCCC----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCC
Q 000438 1341 ---LRSRFGIIPQEPV--L-FEGTVRSNID----PIGQ----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWS 1406 (1510)
Q Consensus 1341 ---LR~~i~iIpQdp~--L-F~gTIR~NLd----p~~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1406 (1510)
++++++++||+|. + +..|+.+|+. .+.. ..++++.+.++..++.+ +.......+||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----------~~~~~~~~~LS 150 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDP----------TRIDDLPRAFS 150 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCCh----------hhhhcCchhcC
Confidence 3467999999985 2 3458888873 1111 12345666666666642 12233345799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000438 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1407 ~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1483 (1510)
+|||||++|||||+++|++|+|||||++||+.+.+.+.+.|++..+ +.|+|+|+|+++.+.. ||++++|++|++++.
T Consensus 151 gG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~ 230 (253)
T TIGR02323 151 GGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVES 230 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999988643 7899999999999986 999999999999999
Q ss_pred cChhHHhcCC-cHHHH
Q 000438 1484 GKPSRLLERP-SLFGA 1498 (1510)
Q Consensus 1484 gsp~~Ll~~~-~~f~~ 1498 (1510)
|+++++..++ ..|.+
T Consensus 231 ~~~~~~~~~~~~~~~~ 246 (253)
T TIGR02323 231 GLTDQVLDDPQHPYTQ 246 (253)
T ss_pred CCHHHHhcCCCCHHHH
Confidence 9999998765 44443
No 337
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-37 Score=318.33 Aligned_cols=212 Identities=27% Similarity=0.442 Sum_probs=185.4
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|+|+|||+|+..- +...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcce
Confidence 678899999987 33489999999999999999999999999999999999999999999999999875 4678999999
Q ss_pred ecCccccCc-ccHHHhcCCCC---CCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1348 IPQEPVLFE-GTVRSNIDPIG---QYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp~~---~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
++-+.-++. -|.||||..|+ +.++ .++.+.-+..++.+.. |..++ +||-|+|||++|||||
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~-------~rRv~----~~S~G~kqkV~iARAl 148 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYL-------DRRVG----EFSTGMKQKVAIARAL 148 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHH-------HHHHh----hhchhhHHHHHHHHHH
Confidence 997766775 49999998664 3333 4455666666776664 34444 5899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~-~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
.++|+|+|||||||+||.-|.+.+++.|++... +++||.-+|-++.++. ||||+++++|+++..|+++++.++
T Consensus 149 vh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 149 VHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred hcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 999999999999999999999999999998764 8999999999999996 999999999999999999998864
No 338
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.2e-36 Score=343.38 Aligned_cols=203 Identities=21% Similarity=0.351 Sum_probs=169.5
Q ss_pred EEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC---CCCcEEEEcCeeCCCCCHHHhh
Q 000438 1268 VDLIDLQVRYRSN--TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE---PSGGRIIIDGIDISLLGLHDLR 1342 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~--~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e---p~~G~I~IDG~dI~~i~l~~LR 1342 (1510)
++|+||+++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ....|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999765 3679999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cceEEecCccccCcc-cHHHhcCCC---C--CCCH-----HHHHH-HHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1343 SRFGIIPQEPVLFEG-TVRSNIDPI---G--QYSD-----EEIWK-SLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1343 ~~i~iIpQdp~LF~g-TIR~NLdp~---~--~~sd-----~eI~~-aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
++++++||++.+|.+ |+++|+... . ...+ +.+.+ .++..++.+. ......+||+|||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~ 149 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRI-----------GGNLVKGISGGER 149 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhh-----------hcccccCcCHHHH
Confidence 899999999999987 999999631 1 1111 11222 3444444322 2233457999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecCh-hhhhh-cCEEEEEeCCEEEEec
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRI-PTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl-~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|+|+++|++ +.+.. ||+|++|++|++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999999999999864 478999999998 46654 9999999999999876
No 339
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-37 Score=337.32 Aligned_cols=215 Identities=28% Similarity=0.472 Sum_probs=188.8
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCe---eCCCCCHHHhhc
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI---DISLLGLHDLRS 1343 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~---dI~~i~l~~LR~ 1343 (1510)
.|+++|++.+|+. -.+++|||++|+.||.+|+.|+||||||||+++|.|+..|++|+|.+||. |.+++.. -.+
T Consensus 2 ~i~i~~~~~~~~~--~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~--~~R 77 (345)
T COG1118 2 SIRINNVKKRFGA--FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAV--RDR 77 (345)
T ss_pred ceeehhhhhhccc--ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccch--hhc
Confidence 3677888888864 34899999999999999999999999999999999999999999999999 8777443 345
Q ss_pred ceEEecCccccCc-ccHHHhcCCCC---------CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHH
Q 000438 1344 RFGIIPQEPVLFE-GTVRSNIDPIG---------QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1510)
Q Consensus 1344 ~i~iIpQdp~LF~-gTIR~NLdp~~---------~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl 1413 (1510)
+||+|.|+.-||. -||++||...- .-.+..+.+.|+.++|...-+..|. .||||||||+
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP~-----------QLSGGQrQRV 146 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYPA-----------QLSGGQRQRV 146 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCch-----------hcChHHHHHH
Confidence 7999999999984 59999997432 1234567788999999988888775 4699999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1414 ~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
+|||||.-.|++|+||||.++||..-.+.+++-+++.. -++|++.|||+.+.+.. ||||+||++|+|...|+|+|..
T Consensus 147 ALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 147 ALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 99999999999999999999999999999999998864 37899999999999877 9999999999999999999999
Q ss_pred cCC-cHH
Q 000438 1491 ERP-SLF 1496 (1510)
Q Consensus 1491 ~~~-~~f 1496 (1510)
..+ +.|
T Consensus 227 ~~P~s~f 233 (345)
T COG1118 227 DHPASRF 233 (345)
T ss_pred cCCCccc
Confidence 888 554
No 340
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-36 Score=341.93 Aligned_cols=220 Identities=29% Similarity=0.486 Sum_probs=184.0
Q ss_pred EEEEEEEEEecCCC--CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC-C----CCcEEEEcCeeCCCCCHHH
Q 000438 1268 VDLIDLQVRYRSNT--PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-P----SGGRIIIDGIDISLLGLHD 1340 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-p----~~G~I~IDG~dI~~i~l~~ 1340 (1510)
++++|+++.|..+. ..+++||||+|++||.+||||.|||||||+.++|+|+++ | .+|+|.+||.|+.+++.++
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 57899999997643 369999999999999999999999999999999999998 3 5799999999999999876
Q ss_pred hh----cceEEecCcccc-Cc--ccHHHhc----CCCCCC-C----HHHHHHHHHHcCchHH---HHhCcCCccccccCC
Q 000438 1341 LR----SRFGIIPQEPVL-FE--GTVRSNI----DPIGQY-S----DEEIWKSLERCQLKDV---VAAKPDKLDSLVADS 1401 (1510)
Q Consensus 1341 LR----~~i~iIpQdp~L-F~--gTIR~NL----dp~~~~-s----d~eI~~aL~~~~L~~~---i~~lp~gLdt~v~e~ 1401 (1510)
+| +.|++|||||.- |+ -||.+-+ ...... + .++..++|+.+++.+- ..+-|
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YP---------- 151 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYP---------- 151 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCC----------
Confidence 43 379999999942 22 1444333 111111 1 3468889999998763 23334
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCC
Q 000438 1402 GDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAG 1478 (1510)
Q Consensus 1402 G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G 1478 (1510)
..||||||||+.||-||+.+|++||-||||++||..+.++|.+.|++.. .++|+|+|||++..+.. ||||+||.+|
T Consensus 152 -helSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG 230 (316)
T COG0444 152 -HELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAG 230 (316)
T ss_pred -cccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECc
Confidence 3579999999999999999999999999999999999999999999876 48899999999999987 9999999999
Q ss_pred EEEEecChhHHhcCC-cHHHH
Q 000438 1479 WAKEFGKPSRLLERP-SLFGA 1498 (1510)
Q Consensus 1479 ~ivE~gsp~~Ll~~~-~~f~~ 1498 (1510)
+|||.|+.+++++++ -.|.+
T Consensus 231 ~iVE~g~~~~i~~~P~HPYT~ 251 (316)
T COG0444 231 RIVEEGPVEEIFKNPKHPYTR 251 (316)
T ss_pred EEEEeCCHHHHhcCCCChHHH
Confidence 999999999999998 44544
No 341
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.6e-37 Score=328.27 Aligned_cols=205 Identities=28% Similarity=0.417 Sum_probs=168.3
Q ss_pred cEEEeeeEEEccCCC-CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000438 644 AVEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1510)
.++++|+++.|+... ..++|+||||+|.+||.++|+|++|||||||.++|+|..+|++|+|.++|+
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 589999999997432 125999999999999999999999999999999999999999999999983
Q ss_pred -EEEEcCCCc---CCCccHHHHHhcCCCC---C--hhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHH
Q 000438 710 -TAYVAQTSW---IQNGTIEENILFGLPM---N--RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 710 -iayv~Q~~~---i~~~Tv~enI~fg~~~---~--~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1510)
+-+|+|+|. -+..||++-|.-+... + +.+..++++..+|. ......++.+|||||+|||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~----------~~~l~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLP----------PSFLDRRPHELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCC----------HHHHhcCchhcChhHHHHHHH
Confidence 679999985 3556999887644321 1 11112222222222 233457889999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
||||..+|+++|||||||+||+.+...|++.+.+... .+-|.|+||||+..+.+ ||||+||++|++++.++.+++...
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 9999999999999999999999999999977665443 47799999999999987 999999999999999999888764
No 342
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-36 Score=350.62 Aligned_cols=208 Identities=24% Similarity=0.387 Sum_probs=177.0
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhh-cce
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLR-SRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR-~~i 1345 (1510)
.++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..+ +++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~----~~~~~~i 80 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ----ALQKNLV 80 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH----hhccceE
Confidence 58999999999743 359999999999999999999999999999999999999999999999998752 233 469
Q ss_pred EEecCcccc---CcccHHHhcCCC--------C---CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHH
Q 000438 1346 GIIPQEPVL---FEGTVRSNIDPI--------G---QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQ 1411 (1510)
Q Consensus 1346 ~iIpQdp~L---F~gTIR~NLdp~--------~---~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQ 1411 (1510)
+|+||+|.+ +..++++|+... . ...++.+.++++..++.+.... .+ .+|||||||
T Consensus 81 ~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-------~~----~~LSgG~~q 149 (272)
T PRK15056 81 AYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHR-------QI----GELSGGQKK 149 (272)
T ss_pred EEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcC-------Cc----ccCCHHHHH
Confidence 999999965 456889997421 0 1123457788899998765433 22 369999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHH
Q 000438 1412 LLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1412 rl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
|++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+++++ +|++++.|+++++
T Consensus 150 rv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~ 228 (272)
T PRK15056 150 RVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETT 228 (272)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhc
Confidence 9999999999999999999999999999999999998864 47899999999999866 9999777 8999999999998
Q ss_pred hc
Q 000438 1490 LE 1491 (1510)
Q Consensus 1490 l~ 1491 (1510)
.+
T Consensus 229 ~~ 230 (272)
T PRK15056 229 FT 230 (272)
T ss_pred cC
Confidence 74
No 343
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-36 Score=336.35 Aligned_cols=190 Identities=24% Similarity=0.311 Sum_probs=161.9
Q ss_pred eEEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccC---CCCcEEEEcCeeCCCCCHHHh
Q 000438 1267 NVDLIDLQVRYRSN--TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE---PSGGRIIIDGIDISLLGLHDL 1341 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~--~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e---p~~G~I~IDG~dI~~i~l~~L 1341 (1510)
.+.++|++|.|+.+ ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 46899999999753 4569999999999999999999999999999999999999 89999999999998765 457
Q ss_pred hcceEEecCccccCcc-cHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHc
Q 000438 1342 RSRFGIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVML 1420 (1510)
Q Consensus 1342 R~~i~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALL 1420 (1510)
|++++++||++.+|.+ |+++||..... +. .+. ....||+|||||++|||||+
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~---------~~--------------~~~----~~~~LS~Ge~qrl~laral~ 134 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALR---------CK--------------GNE----FVRGISGGERKRVSIAEALV 134 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhh---------hc--------------ccc----chhhCCHHHHHHHHHHHHHh
Confidence 8899999999988875 99999963211 00 122 23469999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEe-cChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1421 KHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIA-HRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1421 r~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IA-HRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
++|+||+|||||++||+++.+.+.+.|++..+ ++|+|+++ |+.+.+.+ ||+|++|++|++++.|
T Consensus 135 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 135 SRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 99999999999999999999999999998654 46766654 55677655 9999999999999865
No 344
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.4e-36 Score=359.00 Aligned_cols=207 Identities=25% Similarity=0.400 Sum_probs=170.2
Q ss_pred EEEeeeEEEccCCC-CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------
Q 000438 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------- 708 (1510)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 708 (1510)
|+++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 34799999999999999999999999999999999999999999999987
Q ss_pred -eEEEEcCCCcCC-CccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHH
Q 000438 709 -TTAYVAQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1510)
Q Consensus 709 -~iayv~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARa 783 (1510)
+++|++|++.++ +.|++|||.++... +....++ + ..+-++.+... ......+.+|||||||||+||||
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~--~---v~e~l~~vgL~--~~~~~~~~~LSgGqkQRV~IARA 154 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR--K---VTELLALVGLG--DKHDSYPSNLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH--H---HHHHHHHcCCc--hhhhCChhhCCHHHHHHHHHHHH
Confidence 279999998877 57999999986432 1111111 0 11122222222 23456778999999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000438 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 784 l~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
|+++|+++|||||||+||+.+.+.+.+.+.+...+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 155 L~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~ 231 (343)
T TIGR02314 155 LASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSH 231 (343)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcC
Confidence 99999999999999999999999998766555443 8999999999999865 999999999999999999998754
No 345
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-36 Score=339.09 Aligned_cols=199 Identities=23% Similarity=0.368 Sum_probs=170.5
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCC----CHHHhhcc
Q 000438 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLL----GLHDLRSR 1344 (1510)
Q Consensus 1269 ~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~~LR~~ 1344 (1510)
++ |++++|+.. .+ |+||+|++ |++||+|+||||||||+++|.|+++|++|+|.+||.++... +....|++
T Consensus 3 ~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 76 (214)
T cd03297 3 CV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQRK 76 (214)
T ss_pred ee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhhc
Confidence 45 899999753 24 99999999 99999999999999999999999999999999999998643 23457889
Q ss_pred eEEecCccccCc-ccHHHhcCCC-CCC----CHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1345 FGIIPQEPVLFE-GTVRSNIDPI-GQY----SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1345 i~iIpQdp~LF~-gTIR~NLdp~-~~~----sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
++++||++.+|. .|+++|+... ..+ .++++.++++..++.+.... ...+||+|||||++||||
T Consensus 77 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~a 145 (214)
T cd03297 77 IGLVFQQYALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDHLLNR-----------YPAQLSGGEKQRVALARA 145 (214)
T ss_pred EEEEecCCccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHhHhhc-----------CcccCCHHHHHHHHHHHH
Confidence 999999999986 4999999632 111 23457778888877654433 235799999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1419 LLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
++++|+||+|||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 146 LAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999999998643 7899999999999976 9999999999999875
No 346
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.5e-36 Score=333.90 Aligned_cols=182 Identities=25% Similarity=0.443 Sum_probs=161.6
Q ss_pred eEEEEEEEEEecCC----CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccc--CCCCcEEEEcCeeCCCCCHHH
Q 000438 1267 NVDLIDLQVRYRSN----TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLV--EPSGGRIIIDGIDISLLGLHD 1340 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~----~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--ep~~G~I~IDG~dI~~i~l~~ 1340 (1510)
.|+++|++++|+.. ..++|+|+||+|++||++||+|++|||||||+++|.|++ +|.+|+|.+||.++.. .+
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 58999999999753 245999999999999999999999999999999999999 9999999999999875 36
Q ss_pred hhcceEEecCccccCcc-cHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHH
Q 000438 1341 LRSRFGIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVM 1419 (1510)
Q Consensus 1341 LR~~i~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1419 (1510)
.|++++++||++.+|.+ |+++|+... . ... .||+|||||++|||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~---------~---~~~---------------------~LS~G~~qrv~laral 126 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFA---------A---KLR---------------------GLSGGERKRVSIALEL 126 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHH---------H---Hhc---------------------cCCHHHHHHHHHHHHH
Confidence 78899999999998875 999998421 0 000 6899999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChh-hhhh-cCEEEEEeCCEEEEec
Q 000438 1420 LKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIP-TVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1420 Lr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~-ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
+++|+||+|||||++||..+.+.+.+.|++.. +++|+|+++|+++ .+.+ ||+|++|++|++++.|
T Consensus 127 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 127 VSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred HcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999864 4789999999997 5654 9999999999998765
No 347
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.8e-36 Score=337.14 Aligned_cols=205 Identities=36% Similarity=0.542 Sum_probs=179.6
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1510)
.++++|+++.|+.. .+++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 37899999999632 25799999999999999999999999999999999999999999999987 27
Q ss_pred EEEcCCCcCCCccHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000438 711 AYVAQTSWIQNGTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1510)
Q Consensus 711 ayv~Q~~~i~~~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~ 789 (1510)
+|++|+++++..|++||+.++.+. ++.+..+.++..++.+.++..|.|.+|.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 999999998888999999887543 3344556677778888888888888888888899999999999999999999999
Q ss_pred EEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEec
Q 000438 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSG 850 (1510)
Q Consensus 790 i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g 850 (1510)
++||||||++||+.+.+.+++.+.+. .+++|+|++||+++++..||++++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~-~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQL-LGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHh-cCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 99999999999999999998765543 3458999999999988779999999999997653
No 348
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.5e-36 Score=330.57 Aligned_cols=172 Identities=27% Similarity=0.523 Sum_probs=156.7
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCH-HHhhcce
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL-HDLRSRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l-~~LR~~i 1345 (1510)
.++++|++++| +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999998 8999999999999999999999999999999999999999999999999988864 4468899
Q ss_pred EEecCcc----ccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHcc
Q 000438 1346 GIIPQEP----VLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1510)
Q Consensus 1346 ~iIpQdp----~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1421 (1510)
+|+||+| .++..|+++|+..... ||+|||||++||||+++
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~------------------------------------LS~G~~qrl~la~al~~ 121 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL------------------------------------LSGGNQQKVVLARWLAR 121 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh------------------------------------cCHHHHHHHHHHHHHcc
Confidence 9999995 3445799999864210 89999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEE
Q 000438 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWA 1480 (1510)
Q Consensus 1422 ~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~i 1480 (1510)
+|+||+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++
T Consensus 122 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 122 DPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999864 47899999999999987 999999999975
No 349
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1e-36 Score=361.98 Aligned_cols=192 Identities=29% Similarity=0.406 Sum_probs=163.2
Q ss_pred CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------------eEEEEcCCCcCCC
Q 000438 659 GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------------TTAYVAQTSWIQN 721 (1510)
Q Consensus 659 ~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------------~iayv~Q~~~i~~ 721 (1510)
++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .++||+|++++++
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 35699999999999999999999999999999999999999999999987 3899999999986
Q ss_pred -ccHHHHHhcCCCC---Ch-hhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCc
Q 000438 722 -GTIEENILFGLPM---NR-AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDV 796 (1510)
Q Consensus 722 -~Tv~enI~fg~~~---~~-~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep 796 (1510)
.||+|||.|+.++ +. ++++++.+. ++.+ |.....++++.+|||||||||+|||||+.+|+++|||||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~------l~~v--gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP 156 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALEL------LKLV--GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEA 156 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHH------HHhc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 6999999987543 11 222333222 2222 222346778889999999999999999999999999999
Q ss_pred cCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000438 797 FSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 797 ~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
||+||+.+++.+++.+.+... .|+|+|+|||+++++. .||+|++|++|++++.|+++++++.
T Consensus 157 ~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 157 FSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999988776654 4899999999999865 5999999999999999999998764
No 350
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-36 Score=353.88 Aligned_cols=211 Identities=23% Similarity=0.397 Sum_probs=172.9
Q ss_pred CccEEEeeeEEEccCCC--CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------
Q 000438 642 NIAVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----------- 708 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------- 708 (1510)
+..|+++|++|.|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 19 ~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~ 98 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHE 98 (320)
T ss_pred CceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccc
Confidence 35799999999996422 24699999999999999999999999999999999999999999999875
Q ss_pred ------------------eEEEEcCCC--cCCCccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccC
Q 000438 709 ------------------TTAYVAQTS--WIQNGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGE 765 (1510)
Q Consensus 709 ------------------~iayv~Q~~--~i~~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~ 765 (1510)
.++||+|+| .+++.|++|||.|+... +.+...+ ++ .+.++.+... ....++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~--~~---~~~l~~~gL~-~~~~~~ 172 (320)
T PRK13631 99 LITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK--LA---KFYLNKMGLD-DSYLER 172 (320)
T ss_pred ccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH--HH---HHHHHHcCCC-hhHhcC
Confidence 268999998 68888999999987421 1111111 11 1223333221 123567
Q ss_pred CCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCC
Q 000438 766 RGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREG 844 (1510)
Q Consensus 766 ~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i~~l~~G 844 (1510)
++.+||||||||++|||||+++|+++||||||++||+.+.+.+++.+.+...+|+|+|+|||+++++. .||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 88999999999999999999999999999999999999999998766554456899999999999875 59999999999
Q ss_pred EEEEecChHHHHhc
Q 000438 845 MIVQSGRYNALLNS 858 (1510)
Q Consensus 845 ~i~~~g~~~~l~~~ 858 (1510)
++++.|+++++...
T Consensus 253 ~i~~~g~~~~~~~~ 266 (320)
T PRK13631 253 KILKTGTPYEIFTD 266 (320)
T ss_pred EEEEeCCHHHHhcC
Confidence 99999999988653
No 351
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-36 Score=343.17 Aligned_cols=204 Identities=31% Similarity=0.416 Sum_probs=165.9
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----------------
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------------- 708 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------- 708 (1510)
++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFG---GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 46889999995 24799999999999999999999999999999999999999999999876
Q ss_pred eEEEEcCCCcCCC-ccHHHHHhcCCCC----ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHH
Q 000438 709 TTAYVAQTSWIQN-GTIEENILFGLPM----NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1510)
Q Consensus 709 ~iayv~Q~~~i~~-~Tv~enI~fg~~~----~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARa 783 (1510)
.++|++|++.++. .|++||+.++... +.....+. ..+-++.+... .....+..+|||||||||+||||
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~--~~~~~~~~~LSgG~~qrv~ia~a 150 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREI-----VLEKLEAVGLR--GAEDLYPAELSGGMKKRVALARA 150 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHH-----HHHHHHHcCCc--hhhcCChhhCCHHHHHHHHHHHH
Confidence 2789999987765 5999999886321 11111111 11122233221 22356678999999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000438 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 784 l~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
++.+|+++||||||++||+.+.+.+++.+.+... .|+|+|+|||+++++.. ||+|++|++|++++.|+++++.+.
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 151 LALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999876655444 38999999999998865 999999999999999998887643
No 352
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-36 Score=358.31 Aligned_cols=205 Identities=25% Similarity=0.373 Sum_probs=170.7
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------eEE
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------TTA 711 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~ia 711 (1510)
..|+++|+++.|+ +.++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++| .++
T Consensus 5 ~~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 81 (351)
T PRK11432 5 NFVVLKNITKRFG---SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDIC 81 (351)
T ss_pred cEEEEEeEEEEEC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 3689999999995 35689999999999999999999999999999999999999999999988 379
Q ss_pred EEcCCCcCC-CccHHHHHhcCCCC---Chh-hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhc
Q 000438 712 YVAQTSWIQ-NGTIEENILFGLPM---NRA-KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQ 786 (1510)
Q Consensus 712 yv~Q~~~i~-~~Tv~enI~fg~~~---~~~-~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~ 786 (1510)
||+|++.++ +.||+|||.|+... ++. ..+++ .+-++.+... .....++.+|||||||||+|||||+.
T Consensus 82 ~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v------~~~l~~~gl~--~~~~r~~~~LSgGq~QRVaLARaL~~ 153 (351)
T PRK11432 82 MVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRV------KEALELVDLA--GFEDRYVDQISGGQQQRVALARALIL 153 (351)
T ss_pred EEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHH------HHHHHHcCCc--hhhcCChhhCCHHHHHHHHHHHHHHc
Confidence 999999877 57999999998542 111 11111 1222222221 22356778999999999999999999
Q ss_pred CCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000438 787 DCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 787 ~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
+|+++|||||||+||+..++.+.+.+.+...+ |+|+|+||||.+++. .||+|++|++|+|++.|+++++.+.
T Consensus 154 ~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 154 KPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999998766554443 899999999999875 5999999999999999999998764
No 353
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.5e-36 Score=312.21 Aligned_cols=192 Identities=25% Similarity=0.429 Sum_probs=163.5
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----------------
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------------- 708 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------- 708 (1510)
|+++|+++.|+.. .++|+||||+|++||++-|+||+||||||||+.|.|+..|++|+|.++|
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7899999999853 6799999999999999999999999999999999999999999999988
Q ss_pred eEEEEcCCCc-CCCccHHHHHhcCCCC---ChhhHH----HHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHH
Q 000438 709 TTAYVAQTSW-IQNGTIEENILFGLPM---NRAKYG----EVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 709 ~iayv~Q~~~-i~~~Tv~enI~fg~~~---~~~~~~----~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1510)
+||+|+|+.- +...||.||+.|.... .+..|+ ++++..+|..-.. .-+.+|||||||||+|
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~-----------~lP~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKAR-----------ALPSQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhh-----------cCccccCchHHHHHHH
Confidence 4899999975 5788999999997543 222232 2333333333333 3456899999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccC-CEEEEEeCCEEEEe
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNV-DLILVMREGMIVQS 849 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~-D~i~~l~~G~i~~~ 849 (1510)
|||+..+|+++|-||||.+|||..+..|++.+.+....|.||+++|||.+.+... -+++.+++|+++..
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d 218 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRD 218 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEec
Confidence 9999999999999999999999999999976656667799999999999999874 79999999999864
No 354
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=2.9e-36 Score=327.82 Aligned_cols=177 Identities=31% Similarity=0.529 Sum_probs=161.8
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEe
Q 000438 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGII 1348 (1510)
Q Consensus 1269 ~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iI 1348 (1510)
+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 47899999974 3599999999999999999999999999999999999999999999999999988888889999999
Q ss_pred cCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000438 1349 PQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFM 1428 (1510)
Q Consensus 1349 pQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiL 1428 (1510)
|| +++.+++.++.... ..+||+|||||++||||++++|+++||
T Consensus 79 ~q--------------------------~l~~~gl~~~~~~~-----------~~~LS~G~~qrl~laral~~~p~llll 121 (180)
T cd03214 79 PQ--------------------------ALELLGLAHLADRP-----------FNELSGGERQRVLLARALAQEPPILLL 121 (180)
T ss_pred HH--------------------------HHHHcCCHhHhcCC-----------cccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99 78888888765433 347899999999999999999999999
Q ss_pred eCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1429 DEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1429 DEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
||||++||.++.+.+.+.|++..+ ++|+|+++|+++.+.+ ||++++|++|++++.|
T Consensus 122 DEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 122 DEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999988654 6899999999999865 9999999999998754
No 355
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=5.4e-36 Score=342.27 Aligned_cols=206 Identities=23% Similarity=0.324 Sum_probs=176.8
Q ss_pred EEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEe
Q 000438 1269 DLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGII 1348 (1510)
Q Consensus 1269 ~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iI 1348 (1510)
+++|++++ .+|+|+||+|++||++||+|+||||||||+++|.|++++ +|+|.+||.++...+...+|+.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~~-~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLPG-SGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC-CeEEEECCEecCcCCHHHHhhheEEe
Confidence 46677775 279999999999999999999999999999999999864 99999999999988888888899999
Q ss_pred cCccc-cCcccHHHhcCCCCC--CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHcc
Q 000438 1349 PQEPV-LFEGTVRSNIDPIGQ--YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1510)
Q Consensus 1349 pQdp~-LF~gTIR~NLdp~~~--~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1421 (1510)
||+|. .+..|+++|+..... .+ ++++.++++..++.+..... ...||+|||||++|||||++
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al~~ 143 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAVASALNEVAEALGLDDKLGRS-----------VNQLSGGEWQRVRLAAVVLQ 143 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHHHHHHHHHHHHcCCHhHhcCC-----------cccCCHHHHHHHHHHHHHhc
Confidence 99985 456799999974321 11 34567788888876544332 34689999999999999997
Q ss_pred -------CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1422 -------HSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1422 -------~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
+|++|||||||++||+.+...+.+.|++.. ++.|||+++|+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 144 ~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 223 (248)
T PRK03695 144 VWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLTP 223 (248)
T ss_pred cccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhCc
Confidence 679999999999999999999999998864 47899999999998866 999999999999999999998753
No 356
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-36 Score=348.86 Aligned_cols=209 Identities=25% Similarity=0.423 Sum_probs=169.1
Q ss_pred cEEEeeeEEEccCCC--CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000438 644 AVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1510)
.|+++|+++.|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 478999999996422 24799999999999999999999999999999999999999999999877
Q ss_pred --eEEEEcCCC--cCCCccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHH
Q 000438 709 --TTAYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1510)
Q Consensus 709 --~iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1510)
.++|++|+| .+++.|++|||.|+.. .+.+...+. ...-++.+...+.+....++.+||||||||++||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iA 156 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIA 156 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHcCCCchhhccCCcccCCHHHHHHHHHH
Confidence 269999997 5678899999998642 121111111 1112222222211234567889999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000438 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 782 Ral~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|||+.+|+++||||||++||+.++..+++.+.+...+ |+|+|++||+++++. .||+|++|++|++++.|+.+++.+
T Consensus 157 raL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 157 GVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred HHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999998765544443 899999999999985 599999999999999999988765
No 357
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-36 Score=331.59 Aligned_cols=181 Identities=25% Similarity=0.386 Sum_probs=160.1
Q ss_pred eEEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccc--CCCCcEEEEcCeeCCCCCHHHhh
Q 000438 1267 NVDLIDLQVRYRSN--TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLV--EPSGGRIIIDGIDISLLGLHDLR 1342 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~--~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--ep~~G~I~IDG~dI~~i~l~~LR 1342 (1510)
.|+++|++++|+++ ..++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 58999999999752 245999999999999999999999999999999999986 489999999999986 5678
Q ss_pred cceEEecCccccCcc-cHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHcc
Q 000438 1343 SRFGIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1510)
Q Consensus 1343 ~~i~iIpQdp~LF~g-TIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1421 (1510)
++++++||+|.+|.+ |+++|+... ..++ +||+|||||++||||+++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~---------~~~~------------------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFS---------ALLR------------------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHH---------HHHh------------------------cCCHHHhHHHHHHHHHhc
Confidence 899999999988875 999998621 0000 699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhh-h-hhcCEEEEEeC-CEEEEec
Q 000438 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPT-V-MDCDRVIVVDA-GWAKEFG 1484 (1510)
Q Consensus 1422 ~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~t-i-~~~DrIlVL~~-G~ivE~g 1484 (1510)
+|++|+|||||+++|.++...+.+.|++.. +++|+|+|+|+++. + ..||+|++|++ |++++.|
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999999999999999999864 47899999999984 4 55999999999 9999876
No 358
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=6.6e-36 Score=343.08 Aligned_cols=211 Identities=23% Similarity=0.250 Sum_probs=178.9
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcc--cCCCCcEEEEcCeeCCCCCHHHhhc-
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRL--VEPSGGRIIIDGIDISLLGLHDLRS- 1343 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl--~ep~~G~I~IDG~dI~~i~l~~LR~- 1343 (1510)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++..++.+..++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 4999999999974 3599999999999999999999999999999999998 6899999999999999888766554
Q ss_pred ceEEecCccccCcc-cHHHhcCCC-C---------CCC----HHHHHHHHHHcCchH-HHHhCcCCccccccCCCCCCCh
Q 000438 1344 RFGIIPQEPVLFEG-TVRSNIDPI-G---------QYS----DEEIWKSLERCQLKD-VVAAKPDKLDSLVADSGDNWSV 1407 (1510)
Q Consensus 1344 ~i~iIpQdp~LF~g-TIR~NLdp~-~---------~~s----d~eI~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLS~ 1407 (1510)
.++++||+|.+|.+ |+++|+... . +.+ .+++.++|+.+++.+ ... ..+. ..|||
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~---~~LSg 154 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLS-------RNVN---EGFSG 154 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhc-------cccc---cCCCH
Confidence 58999999999986 889997421 1 011 134567788887752 322 2221 24899
Q ss_pred hHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh--cCEEEEEeCCEEEEec
Q 000438 1408 GQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD--CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1408 GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~--~DrIlVL~~G~ivE~g 1484 (1510)
|||||++|||||+++|+||||||||++||.++.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|
T Consensus 155 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~ 234 (252)
T CHL00131 155 GEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTG 234 (252)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999999864 47899999999999875 8999999999999999
Q ss_pred ChhHH
Q 000438 1485 KPSRL 1489 (1510)
Q Consensus 1485 sp~~L 1489 (1510)
+|+.+
T Consensus 235 ~~~~~ 239 (252)
T CHL00131 235 DAELA 239 (252)
T ss_pred Chhhh
Confidence 99843
No 359
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=4.4e-36 Score=321.74 Aligned_cols=163 Identities=28% Similarity=0.464 Sum_probs=150.0
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+++|++++|+.+ +++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999644 45999999999999999999999999999999999999999999999973 68999
Q ss_pred ecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000438 1348 IPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1510)
Q Consensus 1348 IpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILi 1427 (1510)
+||+|.++++|+++|+... ....||+|||||++||||++++|++|+
T Consensus 69 ~~q~~~~~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~ll 114 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVF 114 (166)
T ss_pred ECCCCccccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999999632 135799999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcCEEEEEeCC
Q 000438 1428 MDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAG 1478 (1510)
Q Consensus 1428 LDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~DrIlVL~~G 1478 (1510)
|||||++||.++.+.+.+.|++. ++|+|++||+++....||+|++|++|
T Consensus 115 lDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~ 163 (166)
T cd03223 115 LDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGE 163 (166)
T ss_pred EECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCC
Confidence 99999999999999999999986 68999999999987779999999876
No 360
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2.6e-36 Score=335.83 Aligned_cols=193 Identities=28% Similarity=0.405 Sum_probs=165.7
Q ss_pred EEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCH----HHhhcce
Q 000438 1270 LIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL----HDLRSRF 1345 (1510)
Q Consensus 1270 f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l----~~LR~~i 1345 (1510)
++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+.. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4689999974 359999999999999999999999999999999999999999999999999775542 2457789
Q ss_pred EEecCccccCc-ccHHHhcCCC---CC----CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1346 GIIPQEPVLFE-GTVRSNIDPI---GQ----YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1346 ~iIpQdp~LF~-gTIR~NLdp~---~~----~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
+++||+|.+|. .|+++|+... .. ..++++.++++..++.+..... ..+||+|||||++|||
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qr~~lar 147 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQK-----------IYELSGGEQQRVALAR 147 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcCC-----------hhhCCHHHHHHHHHHH
Confidence 99999999997 6999999631 11 1245678888888886554332 2469999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhhcCEEEEE
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMDCDRVIVV 1475 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL 1475 (1510)
||+++|++|||||||++||+++.+.+.+.|++.. ++.|+|+++|+++.+..||+|++|
T Consensus 148 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 148 AILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999999999999864 378999999999988779999985
No 361
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-36 Score=350.02 Aligned_cols=210 Identities=24% Similarity=0.394 Sum_probs=168.3
Q ss_pred EEEeeeEEEccCCCC--ccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000438 645 VEVRDGVFSWDDENG--EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~--~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1510)
|+++|++|+|+.... +++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|.
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 789999999964221 36999999999999999999999999999999999999999999999872
Q ss_pred ----EEEEcCCC--cCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHH
Q 000438 710 ----TAYVAQTS--WIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1510)
Q Consensus 710 ----iayv~Q~~--~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARa 783 (1510)
++||+|+| .++..|+.||+.|+.........+..+ ...+-++.+... ....++...+||||||||++||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~~L~-~~~~~~~~~~LSgGqkqrvaiA~a 158 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK--IAAEKLEMVGLA-DEFWEKSPFELSGGQMRRVAIAGI 158 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH--HHHHHHHHcCCC-hhhccCCcccCCHHHHHHHHHHHH
Confidence 68999998 677889999999874311000011110 111222222211 112356778999999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000438 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 784 l~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
++.+|+++||||||++||+.+++.+.+.+.+...+|+|+|++||+++++. .||+|++|++|++++.|+++++..
T Consensus 159 L~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 159 LAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred HHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 99999999999999999999999988755444445899999999999885 599999999999999999998865
No 362
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-36 Score=350.23 Aligned_cols=204 Identities=25% Similarity=0.404 Sum_probs=167.6
Q ss_pred EEEeeeEEEccCCC--CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000438 645 VEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1510)
Q Consensus 645 i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1510)
++++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996422 246999999999999999999999999999999999999999999999872
Q ss_pred ----EEEEcCCC--cCCCccHHHHHhcCCC---CChh----hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHH
Q 000438 710 ----TAYVAQTS--WIQNGTIEENILFGLP---MNRA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQ 776 (1510)
Q Consensus 710 ----iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 776 (1510)
++||+|+| .+++.||+|||.|+.. .+.+ +..++++.+++.. .....++.+|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPE----------ELLARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCh----------hhhhCCcccCCHHHHH
Confidence 69999997 5777899999998732 1211 1122222222211 1124567899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHH
Q 000438 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNA 854 (1510)
Q Consensus 777 Rv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~ 854 (1510)
|++|||||+++|+++||||||++||+.+...+.+.+..... .|+|+|++||+++++. .||+|++|++|++++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999876655444 3899999999999986 499999999999999999988
Q ss_pred HHhc
Q 000438 855 LLNS 858 (1510)
Q Consensus 855 l~~~ 858 (1510)
+.+.
T Consensus 233 ~~~~ 236 (290)
T PRK13634 233 IFAD 236 (290)
T ss_pred HhcC
Confidence 7653
No 363
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=5.7e-36 Score=338.60 Aligned_cols=205 Identities=26% Similarity=0.371 Sum_probs=170.7
Q ss_pred ceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC----CCcEEEEcCeeCCCCCHHHhhcceEEecCccc-cCc--
Q 000438 1284 VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP----SGGRIIIDGIDISLLGLHDLRSRFGIIPQEPV-LFE-- 1356 (1510)
Q Consensus 1284 vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep----~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~-LF~-- 1356 (1510)
+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... ...+++++|+||+|. .|.
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 58999999999999999999999999999999999999 899999999998754 223468999999995 343
Q ss_pred ccHHHhcC-C---CCC---CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000438 1357 GTVRSNID-P---IGQ---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMD 1429 (1510)
Q Consensus 1357 gTIR~NLd-p---~~~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLD 1429 (1510)
-|+.+|+. + .+. ..++++.++++.+++.+. ++.......+||+|||||++||||++++|+|||||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLD 150 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQARALILEALEAVGLPDP--------EEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIAD 150 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCch--------HHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 48888863 1 111 123458888999888631 11122234579999999999999999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC-cHHHH
Q 000438 1430 EATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP-SLFGA 1498 (1510)
Q Consensus 1430 EaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~-~~f~~ 1498 (1510)
|||++||..+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|++++++..+ ..|.+
T Consensus 151 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 223 (230)
T TIGR02770 151 EPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETTR 223 (230)
T ss_pred CCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHHH
Confidence 99999999999999999998653 6899999999999976 9999999999999999999998765 44443
No 364
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-36 Score=346.59 Aligned_cols=204 Identities=26% Similarity=0.408 Sum_probs=169.2
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1510)
.++++|++++|++....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 58999999999643334699999999999999999999999999999999999999999999988 26
Q ss_pred EEEcCCCc--CCCccHHHHHhcCCCC---Chh----hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHH
Q 000438 711 AYVAQTSW--IQNGTIEENILFGLPM---NRA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1510)
Q Consensus 711 ayv~Q~~~--i~~~Tv~enI~fg~~~---~~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1510)
+|++|+|. ++..||+|||.|+... +++ +..+.++..++. ........+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~-----------~~~~~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQ-----------DFKEREPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCH-----------hHhhCCcccCCHHHHHHHHHH
Confidence 99999984 5678999999987431 221 112222222222 223456789999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000438 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 782 Ral~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
||++.+|+++||||||++||+.+.+.+++.+.+...+ |+|+|++||+++.+..||+|++|++|+++..|+.+++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 9999999999999999999999999988665554443 8999999999999877999999999999999999887653
No 365
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=4.4e-36 Score=357.49 Aligned_cols=205 Identities=30% Similarity=0.406 Sum_probs=172.1
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EEE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TAY 712 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------iay 712 (1510)
.++++|++++|++ .++|+|+||++++||+++|+|||||||||||++|+|..+|++|+|.++|+ ++|
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~ 80 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGI 80 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 5899999999963 46899999999999999999999999999999999999999999999883 799
Q ss_pred EcCCCcCC-CccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000438 713 VAQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1510)
Q Consensus 713 v~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~ 788 (1510)
|+|++-++ ..||+|||.|+... +....++ ..++-++.+.. ......++.+|||||||||+|||||+.+|
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~l~L--~~~~~~~~~~LSgGq~QRvaLARaL~~~P 153 (353)
T TIGR03265 81 VFQSYALFPNLTVADNIAYGLKNRGMGRAEVAE-----RVAELLDLVGL--PGSERKYPGQLSGGQQQRVALARALATSP 153 (353)
T ss_pred EeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCC--CchhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999877 57999999998532 1111111 12223333332 22345778899999999999999999999
Q ss_pred CEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000438 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 789 ~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
+++|||||||+||+..++++.+.+.+...+ |.|+|+|||+.+++. .||+|++|++|++++.|+++++.+.
T Consensus 154 ~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 154 GLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999998776655443 899999999999875 5999999999999999999999865
No 366
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=4.3e-35 Score=334.11 Aligned_cols=175 Identities=23% Similarity=0.395 Sum_probs=131.9
Q ss_pred EEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCcc-ccCcccHHHhcCCCC--
Q 000438 1291 SIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEP-VLFEGTVRSNIDPIG-- 1367 (1510)
Q Consensus 1291 ~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp-~LF~gTIR~NLdp~~-- 1367 (1510)
+|..||.+||+||+|-||||++++|.|.++|++|. ..|+ +++|=||-- .-|+|||++-|.-..
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~~----------~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EEDL----------KVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Cccc----------eEeecceeecCCCCCcHHHHHHHhhhh
Confidence 45567899999999999999999999999999998 2222 488999964 248999998874211
Q ss_pred CCCHHHHH-HHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHH
Q 000438 1368 QYSDEEIW-KSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRI 1446 (1510)
Q Consensus 1368 ~~sd~eI~-~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~ 1446 (1510)
.+.+.-.+ +..+ |-.|+..+...-.+|||||.||+++|-||.|++++.+||||+|.||.+..-.+-++
T Consensus 429 ~~~~s~~~~ei~~-----------pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakv 497 (591)
T COG1245 429 AFGSSYFKTEIVK-----------PLNLEDLLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKV 497 (591)
T ss_pred hcccchhHHhhcC-----------ccchHHHHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHH
Confidence 12221111 1122 33344334444457999999999999999999999999999999999999999999
Q ss_pred HHHHc--CCceEEEEecChhhhhh-cCEEEEEeC--CEEEEecChhHHh
Q 000438 1447 IREEF--AACTIISIAHRIPTVMD-CDRVIVVDA--GWAKEFGKPSRLL 1490 (1510)
Q Consensus 1447 I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~--G~ivE~gsp~~Ll 1490 (1510)
||+.. .++|.++|-|++-.+.. +||++|.+. |+=-.-..|..+.
T Consensus 498 IRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~GePg~~g~a~~P~~mr 546 (591)
T COG1245 498 IRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEGEPGKHGHASPPMSMR 546 (591)
T ss_pred HHHHHhhcCceEEEEecceehhhhhhceEEEEecCCCccCcCCCCccHH
Confidence 99854 46899999999998876 999999964 3322333455544
No 367
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=9.1e-36 Score=356.32 Aligned_cols=206 Identities=31% Similarity=0.419 Sum_probs=171.0
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EE
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TA 711 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------ia 711 (1510)
..++++|++++|++ .++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++
T Consensus 13 ~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 89 (375)
T PRK09452 13 PLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVN 89 (375)
T ss_pred ceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 46899999999962 46899999999999999999999999999999999999999999999884 79
Q ss_pred EEcCCCcCC-CccHHHHHhcCCCCC---hhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000438 712 YVAQTSWIQ-NGTIEENILFGLPMN---RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1510)
Q Consensus 712 yv~Q~~~i~-~~Tv~enI~fg~~~~---~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~ 787 (1510)
||+|++.++ ..||+|||.|+.... ....++ ...+-++.+.. ......+..+|||||||||+|||||+.+
T Consensus 90 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~~~~~l~~~~l--~~~~~~~p~~LSgGq~QRVaLARaL~~~ 162 (375)
T PRK09452 90 TVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP-----RVMEALRMVQL--EEFAQRKPHQLSGGQQQRVAIARAVVNK 162 (375)
T ss_pred EEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHH-----HHHHHHHHcCC--chhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 999998776 669999999985421 111111 11122222222 2234567789999999999999999999
Q ss_pred CCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000438 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 788 ~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
|+++|||||||+||++.++.+.+.+.+... .|.|+|+||||.+++. .+|+|++|++|+|++.|+++++.+.
T Consensus 163 P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 163 PKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999998876655544 3899999999999865 5999999999999999999998764
No 368
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=337.82 Aligned_cols=207 Identities=29% Similarity=0.411 Sum_probs=167.5
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------eEEE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------TTAY 712 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~iay 712 (1510)
.++++|+++.|++ +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~ 78 (239)
T cd03296 2 SIEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGF 78 (239)
T ss_pred EEEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEE
Confidence 3789999999963 5799999999999999999999999999999999999999999999987 3799
Q ss_pred EcCCCcCC-CccHHHHHhcCCCCChh----hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000438 713 VAQTSWIQ-NGTIEENILFGLPMNRA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1510)
Q Consensus 713 v~Q~~~i~-~~Tv~enI~fg~~~~~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~ 787 (1510)
++|+|.++ ..|++||+.++...... ...+..+ .....++.+.. ......+..+||||||||++||||++.+
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l--~~~~~~~~~~LS~G~~qrl~la~al~~~ 154 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRA--KVHELLKLVQL--DWLADRYPAQLSGGQRQRVALARALAVE 154 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHH--HHHHHHHHcCC--hhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 99999876 47999999986432110 0111000 11222333322 2234566789999999999999999999
Q ss_pred CCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 788 ~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|+++||||||++||+++.+.+.+.+.+...+ |+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 155 PKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 9999999999999999999998755544443 8999999999998764 99999999999999999888754
No 369
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.4e-35 Score=332.68 Aligned_cols=198 Identities=49% Similarity=0.856 Sum_probs=176.2
Q ss_pred EEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------------
Q 000438 646 EVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----------------- 708 (1510)
Q Consensus 646 ~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------------- 708 (1510)
.+.|+.|.|+.. .++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 467899999743 5799999999999999999999999999999999999999999998865
Q ss_pred eEEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000438 709 TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1510)
Q Consensus 709 ~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~ 788 (1510)
.++|++|++.+++.|++||+.++.+.+.++.+++.+++++...++..|.|+++.++.+..+||||||||++||||++.+|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 37899999998889999999987666555567788888888888888999999889999999999999999999999999
Q ss_pred CEEEEeCccCCCChhHHHHHHHH-HHhhh-cCCcEEEEEccCCCccccCCEEEEEeCCE
Q 000438 789 DIYLLDDVFSAVDAHTGSDIFKE-CVRGA-LKGKTIILVTHQVDFLHNVDLILVMREGM 845 (1510)
Q Consensus 789 ~i~lLDep~salD~~~~~~i~~~-~~~~~-~~~~tvilvtH~~~~l~~~D~i~~l~~G~ 845 (1510)
+++||||||++||+.+.+.+.+. +++.. .+|+|+|++||+.+.+..+|++++|++|.
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999988873 44443 34799999999999988899999999884
No 370
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=6e-35 Score=378.15 Aligned_cols=97 Identities=19% Similarity=0.297 Sum_probs=87.9
Q ss_pred Cccc-cccCCCCCCChhHHHHHHHHHHHcc---CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhh
Q 000438 1393 KLDS-LVADSGDNWSVGQRQLLCLGRVMLK---HSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVM 1467 (1510)
Q Consensus 1393 gLdt-~v~e~G~nLS~GQrQrl~LARALLr---~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~ 1467 (1510)
||+. .++.....||||||||++|||+|++ +|+++||||||++||+.+...+++.|++.. ++.|||+|+|+++.+.
T Consensus 816 gL~~l~l~~~~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~ 895 (924)
T TIGR00630 816 GLGYIKLGQPATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIK 895 (924)
T ss_pred CCCchhhcCccccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 5554 3567778899999999999999997 589999999999999999999999999875 4789999999999998
Q ss_pred hcCEEEEE------eCCEEEEecChhHH
Q 000438 1468 DCDRVIVV------DAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1468 ~~DrIlVL------~~G~ivE~gsp~~L 1489 (1510)
.||+|++| ++|+|++.|+|+++
T Consensus 896 ~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 896 TADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 99999999 79999999999986
No 371
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=7.7e-36 Score=337.29 Aligned_cols=190 Identities=26% Similarity=0.439 Sum_probs=164.4
Q ss_pred eeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCccccCc-ccHHHhc
Q 000438 1285 LKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFE-GTVRSNI 1363 (1510)
Q Consensus 1285 Lk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~-gTIR~NL 1363 (1510)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+++||+|.+|. .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 589999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CCC-----CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCC
Q 000438 1364 DPI-----GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATAS 1434 (1510)
Q Consensus 1364 dp~-----~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTss 1434 (1510)
... ...++ +++.++++.+++.+.....+ ..||||||||++|||||+++|+||||||||++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 144 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRAIVEEHIALVGLTEAADKRP-----------GQLSGGMKQRVAIARALSIRPKVLLLDEPFGA 144 (230)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcCCh-----------hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 531 22332 24677888888866544332 46899999999999999999999999999999
Q ss_pred CCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1435 VDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1435 lD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++.+++
T Consensus 145 LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 145 LDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 99999999999998864 37899999999999876 9999999999999999887663
No 372
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.2e-35 Score=356.91 Aligned_cols=224 Identities=26% Similarity=0.440 Sum_probs=190.6
Q ss_pred eEEEEEEEEEecCCCC--cceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCC----CcEEEEcCeeCCCCCHHH
Q 000438 1267 NVDLIDLQVRYRSNTP--LVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS----GGRIIIDGIDISLLGLHD 1340 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~--~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~----~G~I~IDG~dI~~i~l~~ 1340 (1510)
-++++|++..|..... .+++||||+|.+||.+||||+|||||||+.++|.|+.++. +|+|.+||.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975533 5999999999999999999999999999999999999987 899999999999998876
Q ss_pred hh----cceEEecCccc-cCcc--cHHHhcCC----CC----CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCC
Q 000438 1341 LR----SRFGIIPQEPV-LFEG--TVRSNIDP----IG----QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNW 1405 (1510)
Q Consensus 1341 LR----~~i~iIpQdp~-LF~g--TIR~NLdp----~~----~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1405 (1510)
.| ++|++|||||. .|+- ||.+-|.- .. +...++..+.|++++|.+-... +.| ...|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~--~~y-------PheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR--DRY-------PHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh--ccC-------Cccc
Confidence 64 47999999995 5544 66665531 11 1134567888999998765554 111 2358
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000438 1406 SVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKE 1482 (1510)
Q Consensus 1406 S~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE 1482 (1510)
|||||||+.||+||..+|++||+||||.+||+.|.++|.+.|++.. .+.++|+|||++..+.. ||||+||.+|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999875 57899999999999988 99999999999999
Q ss_pred ecChhHHhcCC-cHHHHH
Q 000438 1483 FGKPSRLLERP-SLFGAL 1499 (1510)
Q Consensus 1483 ~gsp~~Ll~~~-~~f~~l 1499 (1510)
.|+++++++++ -.|-+.
T Consensus 236 ~G~~~~i~~~p~hpYT~~ 253 (539)
T COG1123 236 TGPTEEILSNPQHPYTRG 253 (539)
T ss_pred ecCHHHHHhccCCcccHH
Confidence 99999999988 444443
No 373
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=348.07 Aligned_cols=209 Identities=25% Similarity=0.401 Sum_probs=168.2
Q ss_pred cEEEeeeEEEccCCC--CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000438 644 AVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1510)
.|+++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 378999999996432 13699999999999999999999999999999999999999999998853
Q ss_pred ------------------------eEEEEcCCC--cCCCccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCC
Q 000438 709 ------------------------TTAYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGD 759 (1510)
Q Consensus 709 ------------------------~iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd 759 (1510)
.+|||+|+| .++..||+|||.|+.. .+++...+. ..+-++.+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~- 155 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKR-----AAKYIELVGLD- 155 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHcCCC-
Confidence 269999986 4677899999998742 122111110 11122222221
Q ss_pred cccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEE
Q 000438 760 QTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLI 838 (1510)
Q Consensus 760 ~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i 838 (1510)
....+.+..+||||||||++|||||+.+|+++||||||++||+...+.+.+.+.+...+|+|+|+|||+++++. .||+|
T Consensus 156 ~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv 235 (305)
T PRK13651 156 ESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRT 235 (305)
T ss_pred hhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEE
Confidence 11245678899999999999999999999999999999999999999888766554456899999999999875 59999
Q ss_pred EEEeCCEEEEecChHHHHhc
Q 000438 839 LVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 839 ~~l~~G~i~~~g~~~~l~~~ 858 (1510)
++|++|++++.|+++++.+.
T Consensus 236 ~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 236 IFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEEECCEEEEECCHHHHhcC
Confidence 99999999999999887653
No 374
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=353.96 Aligned_cols=208 Identities=31% Similarity=0.440 Sum_probs=170.1
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------eEEE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------TTAY 712 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~iay 712 (1510)
.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~ 78 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGF 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEE
Confidence 3789999999963 4699999999999999999999999999999999999999999999987 3799
Q ss_pred EcCCCcCCC-ccHHHHHhcCCCCC----hhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000438 713 VAQTSWIQN-GTIEENILFGLPMN----RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1510)
Q Consensus 713 v~Q~~~i~~-~Tv~enI~fg~~~~----~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~ 787 (1510)
|+|++.++. .|++|||.|+.... .....+.. ....+-++.+... .....+..+|||||||||+|||||+.+
T Consensus 79 v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~L~--~~~~~~~~~LSgGq~QRvalArAL~~~ 154 (353)
T PRK10851 79 VFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIK--AKVTQLLEMVQLA--HLADRYPAQLSGGQKQRVALARALAVE 154 (353)
T ss_pred EecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHH--HHHHHHHHHcCCc--hhhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 999998764 79999999985421 00001100 0111223333221 224567789999999999999999999
Q ss_pred CCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000438 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 788 ~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
|+++||||||++||+..++.+.+.+.+...+ |+|+|+|||+++++.. ||+|++|++|++++.|+++++.+.
T Consensus 155 P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 155 PQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999998766555444 8999999999998765 999999999999999999998764
No 375
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-36 Score=325.64 Aligned_cols=213 Identities=29% Similarity=0.464 Sum_probs=186.9
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHh-hcceE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL-RSRFG 1346 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i~ 1346 (1510)
++.++++.+|.. -.+++||||++++||.+||+|||||||||++|++.|+|.|++|+|.++|.||..++.+.. |..|+
T Consensus 5 L~v~~l~k~FGG--l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 5 LEVRGLSKRFGG--LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeccceeecCC--EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 578899999964 349999999999999999999999999999999999999999999999999999999985 55688
Q ss_pred EecCccccCcc-cHHHhcCCCC-------------CC--C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCC
Q 000438 1347 IIPQEPVLFEG-TVRSNIDPIG-------------QY--S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWS 1406 (1510)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~~-------------~~--s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1406 (1510)
--+|.+-+|++ |+-||+.-.. .+ . .++-.+.|+.++|.+.... ...+||
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~-----------~A~~Ls 151 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADR-----------PAGNLS 151 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcc-----------hhhcCC
Confidence 88999999977 9999984210 01 1 2445667777777665433 234799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEe
Q 000438 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1407 ~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1483 (1510)
.||++||-|||||..+|++|+||||.|+|.++....+.+.|++..+ +.||++|-||++.+++ ||||+||+.|+++..
T Consensus 152 yG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAe 231 (250)
T COG0411 152 YGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAE 231 (250)
T ss_pred hhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCccc
Confidence 9999999999999999999999999999999999999999998875 4899999999999998 999999999999999
Q ss_pred cChhHHhcCC
Q 000438 1484 GKPSRLLERP 1493 (1510)
Q Consensus 1484 gsp~~Ll~~~ 1493 (1510)
|+|++..++|
T Consensus 232 G~P~eV~~dp 241 (250)
T COG0411 232 GTPEEVRNNP 241 (250)
T ss_pred CCHHHHhcCH
Confidence 9999999887
No 376
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=3.2e-35 Score=336.58 Aligned_cols=211 Identities=20% Similarity=0.244 Sum_probs=169.2
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhccc--CCCCcEEEEcCeeCCCCCHHHhh-cc
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLV--EPSGGRIIIDGIDISLLGLHDLR-SR 1344 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--ep~~G~I~IDG~dI~~i~l~~LR-~~ 1344 (1510)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999974 35999999999999999999999999999999999995 69999999999999887776654 57
Q ss_pred eEEecCccccCcc-cHHHhc-------CCCCC---CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhH
Q 000438 1345 FGIIPQEPVLFEG-TVRSNI-------DPIGQ---YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1345 i~iIpQdp~LF~g-TIR~NL-------dp~~~---~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQ 1409 (1510)
++++||+|.++.. |..+++ ..... .. ++.+.+.++..++ |+++.+... ..+||+||
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~--~~~LS~G~ 150 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKM-------PEDLLTRSV--NVGFSGGE 150 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCC-------ChhhcccCC--CCCCCHHH
Confidence 9999999987754 444433 21110 01 1122333444433 222222111 13699999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC-CceEEEEecChhhhhh--cCEEEEEeCCEEEEecCh
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA-ACTIISIAHRIPTVMD--CDRVIVVDAGWAKEFGKP 1486 (1510)
Q Consensus 1410 rQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~-~~TvI~IAHRl~ti~~--~DrIlVL~~G~ivE~gsp 1486 (1510)
|||++||||++++|+||+|||||++||.++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|++
T Consensus 151 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~ 230 (248)
T PRK09580 151 KKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDF 230 (248)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCH
Confidence 9999999999999999999999999999999999999987643 6899999999999987 899999999999999998
Q ss_pred hHH
Q 000438 1487 SRL 1489 (1510)
Q Consensus 1487 ~~L 1489 (1510)
+..
T Consensus 231 ~~~ 233 (248)
T PRK09580 231 TLV 233 (248)
T ss_pred HHH
Confidence 854
No 377
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=9e-36 Score=355.17 Aligned_cols=209 Identities=27% Similarity=0.425 Sum_probs=172.0
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCC--cEEEECCe-----------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKIS--GKVKVCGT----------- 709 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~--G~i~~~g~----------- 709 (1510)
..++++|++++|++ .++|+|+||+|++||+++|+|||||||||||++|+|+.+|++ |+|.++|.
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ 80 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRG 80 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCC
Confidence 46899999999963 469999999999999999999999999999999999999999 99999873
Q ss_pred EEEEcCCCcCC-CccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000438 710 TAYVAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1510)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~ 788 (1510)
++||+|++.++ ..||+|||.|+.........+..+ ...+-++.+... .....+..+|||||||||+|||||+.+|
T Consensus 81 ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~--~v~~~l~~~gL~--~~~~~~~~~LSgGq~QRvaLARAL~~~P 156 (362)
T TIGR03258 81 LALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE--RVADALKLVGLG--DAAAHLPAQLSGGMQQRIAIARAIAIEP 156 (362)
T ss_pred EEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHhcCCC--chhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 79999999776 569999999875321100001000 112223333322 2345778899999999999999999999
Q ss_pred CEEEEeCccCCCChhHHHHHHHHHHhhhcC--CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000438 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALK--GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 789 ~i~lLDep~salD~~~~~~i~~~~~~~~~~--~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
+++|||||||+||+..++.+.+.+.+...+ |+|+|+|||+++++. .||+|++|++|++++.|+++++.+.
T Consensus 157 ~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 157 DVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999998776655444 789999999999875 4999999999999999999999765
No 378
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=355.81 Aligned_cols=208 Identities=29% Similarity=0.417 Sum_probs=169.3
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------EEE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------TAY 712 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------iay 712 (1510)
.++++|++++|++ +++|+|+||++++||+++|+|||||||||||++|+|.++|++|+|.++|. ++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~ 79 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGM 79 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEE
Confidence 4889999999963 46999999999999999999999999999999999999999999999872 799
Q ss_pred EcCCCcCC-CccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEE
Q 000438 713 VAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIY 791 (1510)
Q Consensus 713 v~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~ 791 (1510)
++|++.++ ..||+|||.|+........++..+ ...+-++.+.. ......+..+|||||||||+|||||+.+|+++
T Consensus 80 v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~--~~~~~l~~lgL--~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lL 155 (369)
T PRK11000 80 VFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ--RVNQVAEVLQL--AHLLDRKPKALSGGQRQRVAIGRTLVAEPSVF 155 (369)
T ss_pred EeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH--HHHHHHHHcCC--hhhhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99998876 569999999875321100011000 11122223322 22345667899999999999999999999999
Q ss_pred EEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000438 792 LLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 792 lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
||||||++||+..++.+.+.+.+...+ |+|+|+|||+++++. .||+|++|++|++++.|+++++.+.
T Consensus 156 LLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 156 LLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999998766554443 899999999999876 4999999999999999999998754
No 379
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.1e-35 Score=335.77 Aligned_cols=203 Identities=31% Similarity=0.423 Sum_probs=160.5
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCc-----ccCCcEEEECC-----------
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEM-----HKISGKVKVCG----------- 708 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~-----~~~~G~i~~~g----------- 708 (1510)
|+++|++++|+. +++|+|+||++++||+++|+|+||||||||+++|+|.+ +|++|+|.++|
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 468999999953 47999999999999999999999999999999999999 99999999877
Q ss_pred ----eEEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCC--CCccChHHHHHHHHHH
Q 000438 709 ----TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGER--GINLSGGQKQRIQLAR 782 (1510)
Q Consensus 709 ----~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~--g~~LSGGQkqRv~LAR 782 (1510)
.++|++|++.+++.|++||+.++............+ ....+-++.+... .....+ +.+||||||||++|||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~--~~~~~~~~~~~LSgG~~qrv~la~ 154 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELD-ERVEEALRKAALW--DEVKDRLHALGLSGGQQQRLCLAR 154 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHH-HHHHHHHHHcCCC--hHHhccCCcccCCHHHHHHHHHHH
Confidence 268999999887889999998864321000000000 0011112222111 112233 5789999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHH
Q 000438 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNA 854 (1510)
Q Consensus 783 al~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~ 854 (1510)
|++.+|+++||||||++||+.+.+.+++.+.+...+ +|+|++||+++++. .||++++|++|++++.|++++
T Consensus 155 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 155 ALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 999999999999999999999999998765554444 89999999999876 499999999999999887654
No 380
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=2.4e-35 Score=326.43 Aligned_cols=194 Identities=21% Similarity=0.338 Sum_probs=169.2
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ..+|+++++
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 478999999964 35899999999999999999999999999999999999999999999999987643 467889999
Q ss_pred ecCccccC-cccHHHhcCCCC-CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCE
Q 000438 1348 IPQEPVLF-EGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRL 1425 (1510)
Q Consensus 1348 IpQdp~LF-~gTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kI 1425 (1510)
+||++.++ ..|+++|+.... ...++++.++++..++.+..... ..+||+|||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~laral~~~p~l 146 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFEDRP-----------VAQLSAGQQRRVALARLLLSGRPL 146 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhhhcCc-----------hhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999876 579999996432 34677889999999997654322 246999999999999999999999
Q ss_pred EEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEE
Q 000438 1426 LFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVV 1475 (1510)
Q Consensus 1426 LiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL 1475 (1510)
|||||||++||+++.+.+.+.|++.. +++|+|+|||+...+.+ ||+++++
T Consensus 147 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 147 WILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999999999999998754 47899999998776654 9999887
No 381
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.5e-34 Score=387.43 Aligned_cols=209 Identities=24% Similarity=0.281 Sum_probs=148.3
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHH---------HHhcccCCCC----c----EEEEc
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQ---------VFFRLVEPSG----G----RIIID 1329 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~---------~L~rl~ep~~----G----~I~ID 1329 (1510)
.++++|++. ..|+|+|++|++||.+||+|++|||||||++ .|.|...+.. + -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 578888762 2699999999999999999999999999999 4444332211 1 24555
Q ss_pred CeeCCCCC----H------HHhh---------cceE-----EecCc------------------c---------------
Q 000438 1330 GIDISLLG----L------HDLR---------SRFG-----IIPQE------------------P--------------- 1352 (1510)
Q Consensus 1330 G~dI~~i~----l------~~LR---------~~i~-----iIpQd------------------p--------------- 1352 (1510)
-.+|..-+ . +++| ++.+ +..|. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 44443211 1 1444 1111 12221 1
Q ss_pred -----ccCcc-cHHHhcCCCCC------CCHHHHHH---HHHHcCchHHHHhCcCCcccc-ccCCCCCCChhHHHHHHHH
Q 000438 1353 -----VLFEG-TVRSNIDPIGQ------YSDEEIWK---SLERCQLKDVVAAKPDKLDSL-VADSGDNWSVGQRQLLCLG 1416 (1510)
Q Consensus 1353 -----~LF~g-TIR~NLdp~~~------~sd~eI~~---aL~~~~L~~~i~~lp~gLdt~-v~e~G~nLS~GQrQrl~LA 1416 (1510)
+.+.+ ||.|||+.... .+.+++.+ +|+.+ ||+.. .+....+||||||||++||
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l~~L~~v-----------GL~~l~l~q~~~tLSGGE~QRV~LA 821 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIHALCSL-----------GLDYLPLGRPLSSLSGGEIQRLKLA 821 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHHHHHHHc-----------CCcchhhcCccccCCHHHHHHHHHH
Confidence 13333 77888764210 01223333 33333 34332 4455568999999999999
Q ss_pred HHHc---cCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhhcCEEEEEe------CCEEEEecCh
Q 000438 1417 RVML---KHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMDCDRVIVVD------AGWAKEFGKP 1486 (1510)
Q Consensus 1417 RALL---r~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL~------~G~ivE~gsp 1486 (1510)
|||+ ++|++|||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|+ +|++++.|+|
T Consensus 822 raL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 822 YELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred HHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 9998 5999999999999999999999999998864 4789999999999997799999996 7999999999
Q ss_pred hHHhcCC
Q 000438 1487 SRLLERP 1493 (1510)
Q Consensus 1487 ~~Ll~~~ 1493 (1510)
+++++..
T Consensus 902 eel~~~~ 908 (1809)
T PRK00635 902 EELIHLH 908 (1809)
T ss_pred HHHHhcc
Confidence 9998643
No 382
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.4e-35 Score=337.01 Aligned_cols=207 Identities=23% Similarity=0.329 Sum_probs=167.9
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------E
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------T 710 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------i 710 (1510)
++++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468899999952 46999999999999999999999999999999999999999999998772 7
Q ss_pred EEEcCCCcCCC-ccHHHHHhcCCCCChh-h--------HHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHH
Q 000438 711 AYVAQTSWIQN-GTIEENILFGLPMNRA-K--------YGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 711 ayv~Q~~~i~~-~Tv~enI~fg~~~~~~-~--------~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1510)
+|++|++.++. .|++||+.++...... . .....+ ....+.++.+. .....+.+..+||||||||++|
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~--l~~~~~~~~~~LSgG~~qrv~l 154 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREAR-ERAEELLERVG--LADLADRPAGELSYGQQRRLEI 154 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHH-HHHHHHHHHcC--ccchhhCChhhCCHHHHHHHHH
Confidence 99999987765 5999999886432100 0 001111 11223333332 2234567788999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|||++.+|+++||||||++||+.+.+.+++.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+++++.+
T Consensus 155 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 155 ARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 999999999999999999999999999987665544478999999999999865 99999999999999999887753
No 383
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=344.17 Aligned_cols=207 Identities=26% Similarity=0.410 Sum_probs=168.8
Q ss_pred cEEEeeeEEEccCCC--CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000438 644 AVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1510)
.++++|++++|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999996322 24699999999999999999999999999999999999999999999887
Q ss_pred ----eEEEEcCCC--cCCCccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCcc-cccCCCCccChHHHHHH
Q 000438 709 ----TTAYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQT-EIGERGINLSGGQKQRI 778 (1510)
Q Consensus 709 ----~iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t-~ig~~g~~LSGGQkqRv 778 (1510)
.+|||+|+| .++..|++|||.|+.. .+.....+. ..+-++.+ |..+ ..+..+.+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv 154 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKI 154 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHH
Confidence 269999997 5677899999998732 122111111 11222322 2222 23567889999999999
Q ss_pred HHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHH
Q 000438 779 QLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALL 856 (1510)
Q Consensus 779 ~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~ 856 (1510)
+|||||+.+|+++||||||++||+.+...+.+.+.+... +|+|+|+|||+++++. .||+|++|++|++++.|+++++.
T Consensus 155 ~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 155 AIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999876555443 4899999999999875 58999999999999999998876
Q ss_pred h
Q 000438 857 N 857 (1510)
Q Consensus 857 ~ 857 (1510)
+
T Consensus 235 ~ 235 (286)
T PRK13646 235 K 235 (286)
T ss_pred h
Confidence 5
No 384
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.5e-35 Score=336.27 Aligned_cols=191 Identities=25% Similarity=0.412 Sum_probs=160.9
Q ss_pred CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEec-CccccC-cccH
Q 000438 1282 PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIP-QEPVLF-EGTV 1359 (1510)
Q Consensus 1282 ~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIp-Qdp~LF-~gTI 1359 (1510)
.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|+| |++.+| ..|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 4599999999999999999999999999999999999999999999999987653 346788999997 667776 5699
Q ss_pred HHhcCCC---CCCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCC
Q 000438 1360 RSNIDPI---GQYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEAT 1432 (1510)
Q Consensus 1360 R~NLdp~---~~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaT 1432 (1510)
++|+... ...++ +++.++++..++.+.. |+.+ ..||+|||||++|||||+++|+||||||||
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~~~~----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEELL-------DTPV----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-------cCCh----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 9998531 12233 2345566666665433 3333 369999999999999999999999999999
Q ss_pred CCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEeCCEEEEec
Q 000438 1433 ASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1433 sslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1484 (1510)
++||+++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999998643 6899999999999876 9999999999998765
No 385
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=331.88 Aligned_cols=196 Identities=32% Similarity=0.436 Sum_probs=159.1
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------eEEEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------TTAYV 713 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~iayv 713 (1510)
++++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v 77 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMV 77 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEE
Confidence 468899999953 5799999999999999999999999999999999999999999999987 37999
Q ss_pred cCCCcCC-CccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000438 714 AQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1510)
Q Consensus 714 ~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~ 789 (1510)
+|++.++ +.|++||+.++... +....++. ..+-++.+. ..........+||||||||++||||++.+|+
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~--l~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 150 (213)
T cd03259 78 FQDYALFPHLTVAENIAFGLKLRGVPKAEIRAR-----VRELLELVG--LEGLLNRYPHELSGGQQQRVALARALAREPS 150 (213)
T ss_pred cCchhhccCCcHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHcC--ChhhhhcChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9998766 57999999876321 11111111 111222222 2223456678999999999999999999999
Q ss_pred EEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCEEEEec
Q 000438 790 IYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1510)
Q Consensus 790 i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1510)
++||||||++||+.+.+.+++.+.+... .|+|+|++||+++++.. ||++++|++|++++.|
T Consensus 151 ~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 151 LLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999876655444 48999999999998765 9999999999998764
No 386
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7.3e-36 Score=299.95 Aligned_cols=199 Identities=29% Similarity=0.476 Sum_probs=176.9
Q ss_pred EEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCcccc
Q 000438 1275 VRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVL 1354 (1510)
Q Consensus 1275 ~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~L 1354 (1510)
.+|.....++|+|+||++.+||.++|.||||||||||++++.-+..|++|.++..|.|+++.+++.+|++++|+-|.|.|
T Consensus 9 ~~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paL 88 (223)
T COG4619 9 VGYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPAL 88 (223)
T ss_pred HHhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccc
Confidence 45665666799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHHHhcC-CCC----CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000438 1355 FEGTVRSNID-PIG----QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMD 1429 (1510)
Q Consensus 1355 F~gTIR~NLd-p~~----~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLD 1429 (1510)
|.+||.+||- |+. ..+...-.+.|+++++.+.+-.+ +-.+||||||||++|+|-|---|+||+||
T Consensus 89 fg~tVeDNlifP~~~r~rr~dr~aa~~llar~~l~~~~L~k----------~it~lSGGE~QriAliR~Lq~~P~ILLLD 158 (223)
T COG4619 89 FGDTVEDNLIFPWQIRNRRPDRAAALDLLARFALPDSILTK----------NITELSGGEKQRIALIRNLQFMPKILLLD 158 (223)
T ss_pred cccchhhccccchHHhccCCChHHHHHHHHHcCCchhhhcc----------hhhhccchHHHHHHHHHHhhcCCceEEec
Confidence 9999999995 432 33445567778888887765433 23579999999999999999999999999
Q ss_pred CCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhh-hhhcCEEEEEeCCEEEEe
Q 000438 1430 EATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPT-VMDCDRVIVVDAGWAKEF 1483 (1510)
Q Consensus 1430 EaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~t-i~~~DrIlVL~~G~ivE~ 1483 (1510)
|+||+||+.+.+.|.+.|.+.+ ++..++.|||+-+. +..+||++-+..|++-|.
T Consensus 159 E~TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~~ 215 (223)
T COG4619 159 EITSALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGEM 215 (223)
T ss_pred CchhhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCccccc
Confidence 9999999999999999999988 46799999999988 778999999999987543
No 387
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.3e-35 Score=346.19 Aligned_cols=206 Identities=25% Similarity=0.405 Sum_probs=168.8
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eE
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TT 710 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~i 710 (1510)
..++++|++++|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 6 ~~i~i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRV 82 (306)
T ss_pred ceEEEEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcE
Confidence 4799999999996 25799999999999999999999999999999999999999999999987 38
Q ss_pred EEEcCCCcCC-CccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhc
Q 000438 711 AYVAQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQ 786 (1510)
Q Consensus 711 ayv~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~ 786 (1510)
|||||++.++ +.|++||+.|.... +.....+. ..+-++.+... .....+..+||||||||++|||||+.
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~--~~~~~~~~~LS~G~~qrl~la~aL~~ 155 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARAL-----VPPLLEFAKLE--NKADAKVGELSGGMKRRLTLARALVN 155 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCc--hHhcCchhhCCHHHHHHHHHHHHHhC
Confidence 9999998776 57999999853221 11111111 11222222221 12345567899999999999999999
Q ss_pred CCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000438 787 DCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 787 ~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
+|++++|||||++||+..++.+++.+.+...+|+|+|++||++++++. ||+|++|++|++++.|+++++.+.
T Consensus 156 ~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 156 DPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 999999999999999999999987665554568999999999999875 999999999999999999988653
No 388
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-35 Score=324.21 Aligned_cols=224 Identities=27% Similarity=0.434 Sum_probs=194.2
Q ss_pred eEEEEEEEEEecCCC----------------------CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCc
Q 000438 1267 NVDLIDLQVRYRSNT----------------------PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGG 1324 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~----------------------~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G 1324 (1510)
.|+++||+.-+..+. ..-++|+||+|+.||+..|.|-||||||||+.+|.|++||++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 577778777665321 2358999999999999999999999999999999999999999
Q ss_pred EEEEcCeeCCCCCHHHhh----cceEEecCccccCcc-cHHHhcCCCCC---CC----HHHHHHHHHHcCchHHHHhCcC
Q 000438 1325 RIIIDGIDISLLGLHDLR----SRFGIIPQEPVLFEG-TVRSNIDPIGQ---YS----DEEIWKSLERCQLKDVVAAKPD 1392 (1510)
Q Consensus 1325 ~I~IDG~dI~~i~l~~LR----~~i~iIpQdp~LF~g-TIR~NLdp~~~---~s----d~eI~~aL~~~~L~~~i~~lp~ 1392 (1510)
+|++||.||..++..+|| +++++|+|.--||.- ||.+|....-+ .+ .+...++|+.+||.+|-.+.|+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 999999999999988874 579999999998865 99999864322 22 3457889999999999888886
Q ss_pred CccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-c
Q 000438 1393 KLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-C 1469 (1510)
Q Consensus 1393 gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~ 1469 (1510)
. ||||.|||+.|||||..+|+||++|||.|+|||--...+|+-+.+.- -++||+.|||++++... -
T Consensus 164 e-----------LSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 164 E-----------LSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred c-----------ccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 4 69999999999999999999999999999999999999999887753 36899999999998766 9
Q ss_pred CEEEEEeCCEEEEecChhHHhcCC--cHHHHHHH
Q 000438 1470 DRVIVVDAGWAKEFGKPSRLLERP--SLFGALVQ 1501 (1510)
Q Consensus 1470 DrIlVL~~G~ivE~gsp~~Ll~~~--~~f~~lv~ 1501 (1510)
|||..|.+|+|+..|+|+|++.+| .+-+..++
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~~Fv~ 266 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVRDFVR 266 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHHHHHh
Confidence 999999999999999999999998 44444444
No 389
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=342.47 Aligned_cols=203 Identities=30% Similarity=0.455 Sum_probs=165.9
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1510)
.++++|+++.|+. ..++|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++| .+
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 5899999999963 24699999999999999999999999999999999999999999999987 27
Q ss_pred EEEcCCC--cCCCccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHh
Q 000438 711 AYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1510)
Q Consensus 711 ayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~ 785 (1510)
+|++|+| .++..|++||+.|+.. .+....++. ...-++.+.. .........+||||||||++||||++
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~L--~~~~~~~~~~LSgG~~qrv~laraL~ 154 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERR-----VEEALKAVRM--WDFRDKPPYHLSYGQKKRVAIAGVLA 154 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHCCC--HHHhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999998 5778899999998742 111111111 1111222221 11234566789999999999999999
Q ss_pred cCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHH
Q 000438 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNAL 855 (1510)
Q Consensus 786 ~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l 855 (1510)
.+|+++||||||++||+.+.+.+++.+.+...+|+|+|++||+++++. .||+|++|++|++++.|+++++
T Consensus 155 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 155 MDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999998766555445899999999999985 5999999999999999998654
No 390
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=3.5e-35 Score=313.74 Aligned_cols=159 Identities=31% Similarity=0.564 Sum_probs=148.1
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHH-HhhcceE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH-DLRSRFG 1346 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~-~LR~~i~ 1346 (1510)
|+++|++++|+.. ++++|+||+|++||+++|+|++|||||||+++|.|+++|++|+|.+||.++...+.. ..|++++
T Consensus 1 l~~~~l~~~~~~~--~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGGV--KALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECCe--EEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 5789999999743 599999999999999999999999999999999999999999999999999888764 4678899
Q ss_pred EecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEE
Q 000438 1347 IIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLL 1426 (1510)
Q Consensus 1347 iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kIL 1426 (1510)
++|| ||+|||||++||||++++|+||
T Consensus 79 ~~~q------------------------------------------------------LS~G~~qrl~laral~~~p~il 104 (163)
T cd03216 79 MVYQ------------------------------------------------------LSVGERQMVEIARALARNARLL 104 (163)
T ss_pred EEEe------------------------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 9999 8999999999999999999999
Q ss_pred EEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEE
Q 000438 1427 FMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKE 1482 (1510)
Q Consensus 1427 iLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE 1482 (1510)
+|||||++||.++.+.+.+.|++.. ++.|+|+++|+++.+.. ||++++|++|++++
T Consensus 105 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 105 ILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999999864 47899999999998876 99999999999976
No 391
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.9e-35 Score=368.86 Aligned_cols=213 Identities=29% Similarity=0.406 Sum_probs=185.6
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhh-cce
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLR-SRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR-~~i 1345 (1510)
.|+++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+.+ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999964 3599999999999999999999999999999999999999999999999999888777665 469
Q ss_pred EEecCccccCcc-cHHHhcCCCCC---CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHcc
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDPIGQ---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1421 (1510)
+++||++.+|.+ |+++|+..... ..++++.++++..++.+.. +..+ .+||||||||++|||||++
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LSgG~~qrv~la~aL~~ 157 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLDL-------DSSA----GSLEVADRQIVEILRGLMR 157 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCccc-------cCCh----hhCCHHHHHHHHHHHHHHc
Confidence 999999998876 99999964211 1235677788888875433 2222 3689999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1422 ~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
+|+||||||||++||+.+...+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (510)
T PRK15439 158 DSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTD 230 (510)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHH
Confidence 999999999999999999999999998864 47899999999999876 999999999999999999987653
No 392
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=332.36 Aligned_cols=201 Identities=35% Similarity=0.461 Sum_probs=161.5
Q ss_pred EEEeeeEEEccCCC-CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------eEEEEcC
Q 000438 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------TTAYVAQ 715 (1510)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------~iayv~Q 715 (1510)
++++|++++|++.. .+++|+|+||+|++||+++|+|+||||||||+++|+|..+|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 46889999996321 14799999999999999999999999999999999999999999999987 4799999
Q ss_pred CCcCCC-ccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEE
Q 000438 716 TSWIQN-GTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIY 791 (1510)
Q Consensus 716 ~~~i~~-~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~ 791 (1510)
++.++. .|++||+.++... ......+ ...+.++.+.. .........+||||||||++||||++.+|+++
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l--~~~~~~~~~~LSgG~~qrl~la~al~~~p~ll 153 (220)
T cd03293 81 QDALLPWLTVLDNVALGLELQGVPKAEARE-----RAEELLELVGL--SGFENAYPHQLSGGMRQRVALARALAVDPDVL 153 (220)
T ss_pred ccccccCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCC--hhhhhCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 988765 7999999875321 1111111 11122222221 12344567889999999999999999999999
Q ss_pred EEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEe--CCEEEEecCh
Q 000438 792 LLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMR--EGMIVQSGRY 852 (1510)
Q Consensus 792 lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~--~G~i~~~g~~ 852 (1510)
||||||++||+.+.+.+++.+.+... .|+|+|++||+++++. .||++++|+ +|++++.++.
T Consensus 154 lLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 154 LLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 99999999999999999876655433 4899999999999876 499999999 7999987764
No 393
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=351.16 Aligned_cols=207 Identities=27% Similarity=0.396 Sum_probs=170.0
Q ss_pred EEEeeeEEEccCCC-CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------
Q 000438 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------- 708 (1510)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 708 (1510)
|+++|++++|+... ++++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 35799999999999999999999999999999999999999999999986
Q ss_pred -eEEEEcCCCcCCC-ccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHH
Q 000438 709 -TTAYVAQTSWIQN-GTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1510)
Q Consensus 709 -~iayv~Q~~~i~~-~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARa 783 (1510)
.++|++|++.++. .|++||+.++... ....+++ ...+.++.+.. .........+|||||||||+||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL--~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELVGL--SDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCC--chhhhCChhhCCHHHHHHHHHHHH
Confidence 2899999988764 7999999886422 1111111 11222333322 223456778999999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000438 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 784 l~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
++.+|+++||||||++||+.+.+.+.+.+.+... .|+|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999876655444 38999999999999865 999999999999999999998754
No 394
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-32 Score=304.60 Aligned_cols=501 Identities=19% Similarity=0.188 Sum_probs=323.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 000438 319 RTTLLRCFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKSSSFYEGYYLVLILLVAKFV-EVFSTHQFNFNSQKLG 397 (1510)
Q Consensus 319 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~-~~l~~~~~~~~~~~~g 397 (1510)
.-.++|.+++.++....+.+...+. +-.+|-.+-+++-+.+...-.-..+.+++++..++ +.+++.--.+..+...
T Consensus 4 ll~llr~nr~~~i~~~a~s~a~g~~---g~~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~is~lg~t~~gq~~I 80 (546)
T COG4615 4 LLLLLRQNRWPFISVMALSLASGAL---GIGLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLISQLGLTTLGQHFI 80 (546)
T ss_pred HHHHhcccccHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4467888888887666665554433 33444444444432221100001111111111111 2222222333333444
Q ss_pred HHHHHHHHHHHHHHHhcCChhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000438 398 MLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHAVWLMPLQISVALILLYNCLGASVITTVVG 477 (1510)
Q Consensus 398 ~riR~~L~~~Iy~K~L~ls~~~~~~~~~G~ivNlms~D~~ri~~~~~~~~~~w~~plqi~lal~lL~~~lG~s~l~gl~~ 477 (1510)
.++|.-++ +|.+.-+-....+..++.++.-++.|+..|.-.+..+.++-.+.+-+..+...|++.-+...+..++.
T Consensus 81 ~klr~~~~----~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV~ 156 (546)
T COG4615 81 YKLRSEFI----KKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVVW 156 (546)
T ss_pred HHHHHHHH----HHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 45555544 55555555555556778899999999999997777777666555545555666666666777777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhccH--HHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q 000438 478 IIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWE--DHFNKRI-LSFRESEFGWLTKFMYSISGN 554 (1510)
Q Consensus 478 ~~l~~~~~~~~~~~~~~~q~~~m~~~D~Rv~~~sEiL~~Ik~IKl~awE--~~f~~~I-~~~R~~El~~l~~~~~~~a~~ 554 (1510)
+++.+..+.+..++..+...+-.+.-|+-.+..+.++.|-|-+|++.=. ..+.+.+ ...++.|- ...+....+
T Consensus 157 ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~~r~----~~~~~n~f~ 232 (546)
T COG4615 157 IVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQEYRH----HIIRANTFH 232 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHHHHh----hhhhhhHHH
Confidence 8888888888877777777777888899999999999999999987632 2222222 22222221 112221111
Q ss_pred -HHHHHHHHHHHHHHH--HHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccc
Q 000438 555 -IIVMWSTPVLISTLT--FATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNE 631 (1510)
Q Consensus 555 -~~~~~~~p~~v~~~t--F~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~~~ 631 (1510)
....|..-.+.+++. |......+=+ +...+.|....+-.|+.|+.++...++.+.+|.|+++||.++=..|+..+-
T Consensus 233 ~la~~~~ni~l~~lIGlvf~lal~~~w~-st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~ 311 (546)
T COG4615 233 LLAVNWSNIMLLGLIGLVFWLALSLGWA-STNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADF 311 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc-hhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccC
Confidence 223344333333333 3222222211 112334444445568999999999999999999999999998775554321
Q ss_pred cccccCCCCCCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCeE-
Q 000438 632 SVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGTT- 710 (1510)
Q Consensus 632 ~~~~~~~~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~i- 710 (1510)
..+ .+.+ .-..++++|+.|+|.+. ..-+..||++|++||+|-|+|.||||||||++.+.|.++|++|+|.++|+.
T Consensus 312 ~~~-q~~p-~~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV 387 (546)
T COG4615 312 PRP-QAFP-DWKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPV 387 (546)
T ss_pred CCC-CcCC-cccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCceeECCccC
Confidence 111 1111 23579999999999753 367899999999999999999999999999999999999999999999963
Q ss_pred ------------EEEcCCCcCCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCC---CCccChHH
Q 000438 711 ------------AYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGER---GINLSGGQ 774 (1510)
Q Consensus 711 ------------ayv~Q~~~i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~---g~~LSGGQ 774 (1510)
+-|+-+-|+|..++ -+.. -.++..++- ++.++....|.+..+ ...||-||
T Consensus 388 ~~e~ledYR~LfSavFsDyhLF~~ll-----~~e~~as~q~i~~~---------LqrLel~~ktsl~d~~fs~~kLStGQ 453 (546)
T COG4615 388 SAEQLEDYRKLFSAVFSDYHLFDQLL-----GPEGKASPQLIEKW---------LQRLELAHKTSLNDGRFSNLKLSTGQ 453 (546)
T ss_pred CCCCHHHHHHHHHHHhhhHhhhHhhh-----CCccCCChHHHHHH---------HHHHHHhhhhcccCCcccccccccch
Confidence 12333333332211 1111 112222222 222222223333222 24699999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhh-hcCCcEEEEEccCCCccccCCEEEEEeCCEEEEe
Q 000438 775 KQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRG-ALKGKTIILVTHQVDFLHNVDLILVMREGMIVQS 849 (1510)
Q Consensus 775 kqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~-~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~ 849 (1510)
|.|+++--|+.-+.|||+|||=-+.-||+-++..++..+-. ...||||+.||||-.+...|||++.|++|++++.
T Consensus 454 kKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 454 KKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred HHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 99999999999999999999999999999999999887744 4569999999999999999999999999999874
No 395
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=332.41 Aligned_cols=201 Identities=21% Similarity=0.363 Sum_probs=162.6
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eEEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TTAY 712 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~iay 712 (1510)
|+++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEE
Confidence 478999999953 4799999999999999999999999999999999999999999999987 3799
Q ss_pred EcCCCcCCC-ccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000438 713 VAQTSWIQN-GTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1510)
Q Consensus 713 v~Q~~~i~~-~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~ 788 (1510)
++|++.++. .|++||+.++.. .+....++ ...+-++.+... .....+..+||||||||++||||++.+|
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~--~~~~~~~~~LS~G~~qr~~la~al~~~p 150 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRE-----RIDELLDFVGLL--EAADRLVKTYSGGMRRRLEIARSLVHRP 150 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCH--HHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999987654 699999987522 11111111 011222333221 1234566789999999999999999999
Q ss_pred CEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHH
Q 000438 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNAL 855 (1510)
Q Consensus 789 ~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 855 (1510)
+++||||||++||+++.+.+.+.+.+...+ |+|+|++||+++++.. ||++++|++|++++.|+++++
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 151 EVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999998766555454 8999999999999875 999999999999998887653
No 396
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=370.48 Aligned_cols=212 Identities=26% Similarity=0.365 Sum_probs=181.9
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC--CCcEEEEcCeeCCCCCHHH-hhc
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP--SGGRIIIDGIDISLLGLHD-LRS 1343 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep--~~G~I~IDG~dI~~i~l~~-LR~ 1343 (1510)
-|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+..+ .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 4899999999963 3599999999999999999999999999999999999996 8999999999998777655 467
Q ss_pred ceEEecCccccCcc-cHHHhcCCCC------CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHH
Q 000438 1344 RFGIIPQEPVLFEG-TVRSNIDPIG------QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1510)
Q Consensus 1344 ~i~iIpQdp~LF~g-TIR~NLdp~~------~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQr 1412 (1510)
+++|+||+|.+|.. |+++|+.... ..+ .+++.++++..++.+. ++..+ .+||||||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LSgGqkqr 151 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDIN-------PATPV----GNLGLGQQQL 151 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCC-------cccch----hhCCHHHHHH
Confidence 89999999988865 9999996421 112 2346677777776432 23333 4699999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1413 l~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
++|||||+.+|+||||||||++||+++...+.+.|++.. ++.|||+|+|+++.+.. ||||++|++|++++.|+++++.
T Consensus 152 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 231 (506)
T PRK13549 152 VEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMT 231 (506)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCC
Confidence 999999999999999999999999999999999998863 46899999999999976 9999999999999999998765
Q ss_pred c
Q 000438 1491 E 1491 (1510)
Q Consensus 1491 ~ 1491 (1510)
.
T Consensus 232 ~ 232 (506)
T PRK13549 232 E 232 (506)
T ss_pred H
Confidence 3
No 397
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=4.3e-35 Score=330.75 Aligned_cols=204 Identities=27% Similarity=0.445 Sum_probs=172.7
Q ss_pred CccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000438 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1510)
...++++|++++|++..+.++|+|+||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 4579999999999743334699999999999999999999999999999999999999999999987
Q ss_pred eEEEEcCCCcCCCccHHHHHhcCCCCC-hhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000438 709 TTAYVAQTSWIQNGTIEENILFGLPMN-RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1510)
Q Consensus 709 ~iayv~Q~~~i~~~Tv~enI~fg~~~~-~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~ 787 (1510)
.++|++|++.++..|++||+.++.... .....+..+...+.+.++.++.|..+.+++++.+|||||||||+||||++.+
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~ 168 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRN 168 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 279999999988889999999875421 1112222233345566777776777778889999999999999999999999
Q ss_pred CCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEE
Q 000438 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMI 846 (1510)
Q Consensus 788 ~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i 846 (1510)
|+++||||||++||+++.+.+.+.+.+ ..+++|+|++||+++++..||+|++|++|++
T Consensus 169 p~llllDEPt~~LD~~~~~~l~~~l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 169 PQVLILDEATSALDAESEQQVQQALYD-WPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHH-HcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 999999999999999999988865544 4457899999999999877999999999974
No 398
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-35 Score=333.56 Aligned_cols=201 Identities=25% Similarity=0.380 Sum_probs=167.3
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1510)
.++++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|..+|++|+|.++| .+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4789999999952 4799999999999999999999999999999999999999999999987 27
Q ss_pred EEEcCCCcCCCccHHHHHhcCCCCCh---hhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000438 711 AYVAQTSWIQNGTIEENILFGLPMNR---AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1510)
Q Consensus 711 ayv~Q~~~i~~~Tv~enI~fg~~~~~---~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~ 787 (1510)
+|++|++.++..|++||+.++..... .+..+.++..++.. ....+...+||||||||++||||++.+
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNK----------EYATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCH----------HHhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 99999998888899999988643221 11122222222211 123456788999999999999999999
Q ss_pred CCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 788 ~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|+++||||||++||+.+.+.+.+.+..... .|+|+|++||+++++.. ||+|++|++|++++.|+.+++..
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 999999999999999999888866554444 38999999999999865 99999999999999999988765
No 399
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.5e-35 Score=329.27 Aligned_cols=189 Identities=28% Similarity=0.457 Sum_probs=156.2
Q ss_pred EEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----------eEEEEcC
Q 000438 646 EVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----------TTAYVAQ 715 (1510)
Q Consensus 646 ~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------~iayv~Q 715 (1510)
+++|++++|++. +++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .++|++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q 78 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQ 78 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEec
Confidence 367899999531 5799999999999999999999999999999999999999999999987 3799999
Q ss_pred CC--cCCCccHHHHHhcCCCCCh---hhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000438 716 TS--WIQNGTIEENILFGLPMNR---AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1510)
Q Consensus 716 ~~--~i~~~Tv~enI~fg~~~~~---~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i 790 (1510)
++ .++..|++||+.++.+... ++..+.++.+++. + .......+||||||||++||||++.+|++
T Consensus 79 ~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~---------~--~~~~~~~~LS~G~~qrv~laral~~~p~l 147 (205)
T cd03226 79 DVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLY---------A--LKERHPLSLSGGQKQRLAIAAALLSGKDL 147 (205)
T ss_pred ChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCc---------h--hcCCCchhCCHHHHHHHHHHHHHHhCCCE
Confidence 97 4567899999988643211 1222333333222 1 23456678999999999999999999999
Q ss_pred EEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEE
Q 000438 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIV 847 (1510)
Q Consensus 791 ~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~ 847 (1510)
+||||||++||+.+.+.+.+.+.+...+|+|+|++||+++.+.. ||++++|++|+++
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 148 LIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999887655544568999999999999875 9999999999874
No 400
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=6e-35 Score=324.97 Aligned_cols=189 Identities=27% Similarity=0.401 Sum_probs=162.3
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------e
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------T 709 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ 709 (1510)
..++++|++++|+.. ..++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 468999999999642 24799999999999999999999999999999999999999999999987 3
Q ss_pred EEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000438 710 TAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1510)
Q Consensus 710 iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~ 789 (1510)
++|++|+|.+++.|++||+.+...++. +++.++. + +++++.+||||||||++||||++.+|+
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~~~~---~~~~~~l------~---------~~~~~~~LS~G~~qrv~laral~~~p~ 145 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDEYSD---EEIYGAL------R---------VSEGGLNLSQGQRQLLCLARALLKRPR 145 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCCCCH---HHHHHHh------h---------ccCCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 899999999988999999976543322 2222211 1 346788999999999999999999999
Q ss_pred EEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecC
Q 000438 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGR 851 (1510)
Q Consensus 790 i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~ 851 (1510)
++||||||++||+...+.+.+.+.+. .+|+|+|++||+++.+..+|++++|++|++.+.|+
T Consensus 146 llllDEP~~~LD~~~~~~l~~~l~~~-~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 146 VLVLDEATASIDYATDALIQKTIREE-FTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHh-cCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 99999999999999998887655543 46899999999999987799999999999988775
No 401
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.5e-35 Score=335.23 Aligned_cols=206 Identities=32% Similarity=0.417 Sum_probs=164.6
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe---------------
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------- 709 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------- 709 (1510)
++++|++++|+. ++++|+|+||++++||+++|+||||||||||+++|+|..+|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 678999999952 357999999999999999999999999999999999999999999998872
Q ss_pred -EEEEcCCCcCC-CccHHHHHhcCCCCChhh-------HHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHH
Q 000438 710 -TAYVAQTSWIQ-NGTIEENILFGLPMNRAK-------YGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 710 -iayv~Q~~~i~-~~Tv~enI~fg~~~~~~~-------~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1510)
++|++|++.++ ..|++||+.++....... +... +.....+-++.+. ........+.+||||||||++|
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~--l~~~~~~~~~~LSgG~~qrv~l 156 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEE-DKERALSALERVG--LADKAYQRADQLSGGQQQRVAI 156 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHH-HHHHHHHHHHHcC--cHhhhcCCcccCCHHHHHHHHH
Confidence 79999998776 479999998764210000 0000 0011112222222 2223456778999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHH
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNAL 855 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l 855 (1510)
|||++.+|+++||||||++||+.+.+.+.+.+.+... .|+|+|++||+++++. .||++++|++|++++.|+++++
T Consensus 157 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 157 ARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 9999999999999999999999999998876555444 3899999999999985 5999999999999999998875
No 402
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=339.53 Aligned_cols=204 Identities=32% Similarity=0.470 Sum_probs=167.7
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------E
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------T 710 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------i 710 (1510)
++++|++++|+. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 689999999953 246999999999999999999999999999999999999999999998862 7
Q ss_pred EEEcCCCc--CCCccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHh
Q 000438 711 AYVAQTSW--IQNGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1510)
Q Consensus 711 ayv~Q~~~--i~~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~ 785 (1510)
+|++|+|. +++.|++|||.++... +.....+. ...-++.+. ........+.+||||||||++||||++
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~g--l~~~~~~~~~~LS~G~~qrv~laral~ 152 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKR-----VDRALAEIG--LEKYRHRSPKTLSGGQGQCVALAGILT 152 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHCC--CHHHhcCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 5678999999886421 11111111 111222222 222345677899999999999999999
Q ss_pred cCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHh
Q 000438 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 786 ~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
.+|+++||||||++||+.++..+++.+.+...+|+|+|++||+++.++.||+|++|++|++++.|+.+++..
T Consensus 153 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 153 MEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999998766554446899999999999988899999999999999999988754
No 403
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.9e-35 Score=331.33 Aligned_cols=193 Identities=24% Similarity=0.412 Sum_probs=156.0
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe---------------
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------- 709 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------- 709 (1510)
++++|++++|++. .+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 6899999999532 246999999999999999999999999999999999999999999999872
Q ss_pred -EEEEcCCCcCC-CccHHHHHhcCCCC---Chh-hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHH
Q 000438 710 -TAYVAQTSWIQ-NGTIEENILFGLPM---NRA-KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1510)
Q Consensus 710 -iayv~Q~~~i~-~~Tv~enI~fg~~~---~~~-~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARa 783 (1510)
++|++|++.++ ..|++||+.++... ... ..++ ..+.++.+... ........+||||||||++||||
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~------~~~~l~~~~l~--~~~~~~~~~LSgG~~qrv~lara 152 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANER------VSAALEKVGLE--GKAHALPMQLSGGEQQRVAIARA 152 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHH------HHHHHHHcCCh--hhhhCChhhCCHHHHHHHHHHHH
Confidence 69999998776 46999999876321 111 1111 11122222211 12345667899999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEE
Q 000438 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMI 846 (1510)
Q Consensus 784 l~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i 846 (1510)
++.+|+++||||||++||+.+.+.+.+.+.+...+|+|+|+|||+++++.. ||++++|++|++
T Consensus 153 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 153 IVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999987655544458999999999999875 899999999975
No 404
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-35 Score=339.65 Aligned_cols=204 Identities=27% Similarity=0.443 Sum_probs=169.8
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1510)
..++++|+++.|+. ..+++|+|+||+|++||+++|+|+||||||||+++|+|..+|++|+|.++|.
T Consensus 4 ~~l~~~~l~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (279)
T PRK13635 4 EIIRVEHISFRYPD-AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQ 82 (279)
T ss_pred ceEEEEEEEEEeCC-CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhh
Confidence 36899999999963 2346999999999999999999999999999999999999999999999883
Q ss_pred EEEEcCCC--cCCCccHHHHHhcCCCC---Chh----hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHH
Q 000438 710 TAYVAQTS--WIQNGTIEENILFGLPM---NRA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 710 iayv~Q~~--~i~~~Tv~enI~fg~~~---~~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1510)
++|++|++ .+++.|++|||.++... ..+ +..++++..++. ..+.....+||||||||++|
T Consensus 83 i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~-----------~~~~~~~~~LS~G~~qrv~l 151 (279)
T PRK13635 83 VGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGME-----------DFLNREPHRLSGGQKQRVAI 151 (279)
T ss_pred eEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCCh-----------hhhhCCcccCCHHHHHHHHH
Confidence 79999998 46678999999986321 111 112222222222 22445677999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
|||++.+|+++||||||++||+.+.+.+++.+.+...+ |+|+|++||+++.+..||+|++|++|++++.|+.+++.+.
T Consensus 152 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 152 AGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999998766554444 8999999999999888999999999999999998887653
No 405
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-35 Score=335.01 Aligned_cols=207 Identities=29% Similarity=0.411 Sum_probs=165.1
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC----------------
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------------- 708 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------- 708 (1510)
++++|++++|++ ++++|+|+||++++||+++|+|+||||||||+++|+|..+|++|+|.++|
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 468899999963 25799999999999999999999999999999999999999999999876
Q ss_pred eEEEEcCCCcCCC-ccHHHHHhcCCCCChhh-------HHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHH
Q 000438 709 TTAYVAQTSWIQN-GTIEENILFGLPMNRAK-------YGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 709 ~iayv~Q~~~i~~-~Tv~enI~fg~~~~~~~-------~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1510)
.++|++|++.++. .|++||+.++....... .... ......+.++.+.. ......++.+||||||||++|
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l--~~~~~~~~~~LS~G~~qrv~l 155 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKE-EKQRALAALERVGL--LDKAYQRADQLSGGQQQRVAI 155 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHH-HHHHHHHHHHHcCC--hhhhCCCcccCCHHHHHHHHH
Confidence 2789999987654 79999998763210000 0000 00011122233222 223456788999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHH
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALL 856 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~ 856 (1510)
|||++.+|+++||||||++||+.+.+.+++.+.+... .|+|+|++||+++.+. .||++++|++|++++.|+++++.
T Consensus 156 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 156 ARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 9999999999999999999999999999876655444 4899999999999987 59999999999999999988763
No 406
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-35 Score=336.96 Aligned_cols=204 Identities=26% Similarity=0.402 Sum_probs=166.3
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC---------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG--------- 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g--------- 708 (1510)
..++++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (253)
T PRK14242 5 PKMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD 81 (253)
T ss_pred cEEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC
Confidence 46899999999953 469999999999999999999999999999999999864 5899998876
Q ss_pred ------eEEEEcCCCcCCCccHHHHHhcCCCC----Chh----hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHH
Q 000438 709 ------TTAYVAQTSWIQNGTIEENILFGLPM----NRA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQ 774 (1510)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~~----~~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 774 (1510)
.++|++|++.+++.|++||+.++... ..+ +.++.++.+++...+ ....++.+.+|||||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq 154 (253)
T PRK14242 82 VVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-------KDRLHESALGLSGGQ 154 (253)
T ss_pred HHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCHHH
Confidence 27999999988878999999886321 111 111112222221111 123456788999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChH
Q 000438 775 KQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYN 853 (1510)
Q Consensus 775 kqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~ 853 (1510)
||||+||||++.+|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++++.. ||++++|++|++++.|+++
T Consensus 155 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~-~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 233 (253)
T PRK14242 155 QQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHEL-KARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTE 233 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-hcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999888655443 457999999999999864 9999999999999999998
Q ss_pred HHHh
Q 000438 854 ALLN 857 (1510)
Q Consensus 854 ~l~~ 857 (1510)
++.+
T Consensus 234 ~~~~ 237 (253)
T PRK14242 234 QIFT 237 (253)
T ss_pred HHHc
Confidence 8764
No 407
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.8e-35 Score=326.84 Aligned_cols=192 Identities=22% Similarity=0.364 Sum_probs=159.7
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------eEEEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------TTAYV 713 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~iayv 713 (1510)
|+++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|..+|++|+|.++| .++|+
T Consensus 1 l~~~~l~~~~~---~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 77 (208)
T cd03268 1 LKTNDLTKTYG---KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGAL 77 (208)
T ss_pred CEEEEEEEEEC---CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEe
Confidence 46899999995 25799999999999999999999999999999999999999999999987 37899
Q ss_pred cCCCcCC-CccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000438 714 AQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1510)
Q Consensus 714 ~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~ 789 (1510)
+|++.++ +.|++||+.++... ++++.++.++..++.. ....++.+|||||||||+||||++.+|+
T Consensus 78 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~la~al~~~p~ 146 (208)
T cd03268 78 IEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKD-----------SAKKKVKGFSLGMKQRLGIALALLGNPD 146 (208)
T ss_pred cCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHH-----------HHhhhHhhCCHHHHHHHHHHHHHhcCCC
Confidence 9998765 68999999875321 2222222333332221 2345677899999999999999999999
Q ss_pred EEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEec
Q 000438 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1510)
Q Consensus 790 i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1510)
++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++++.. ||++++|++|++++.|
T Consensus 147 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 147 LLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999987655544468999999999999865 9999999999998754
No 408
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=6.6e-35 Score=331.32 Aligned_cols=204 Identities=22% Similarity=0.398 Sum_probs=168.6
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------EEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------TAY 712 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------iay 712 (1510)
++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|..+|++|+|.++|. ++|
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYG---ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGV 78 (236)
T ss_pred EEEEeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEE
Confidence 68899999995 357999999999999999999999999999999999999999999999872 799
Q ss_pred EcCCCcC-CCccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000438 713 VAQTSWI-QNGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1510)
Q Consensus 713 v~Q~~~i-~~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~ 788 (1510)
++|++.+ +..|++||+.++... ......+ ...+-++.+ |.....++++.+||||||||++||||++.+|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~p 151 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHRP 151 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 9999876 578999999875321 1111111 111222332 2223456778899999999999999999999
Q ss_pred CEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000438 789 DIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 789 ~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
+++||||||++||+.+.+.+.+.+.+... +|+|+|++||+++++..||++++|++|++++.|+++++.+.
T Consensus 152 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 152 ALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999876655443 58999999999999888999999999999999998887653
No 409
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-35 Score=370.70 Aligned_cols=212 Identities=26% Similarity=0.366 Sum_probs=182.6
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHh-hcce
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDL-RSRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i 1345 (1510)
-++++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.+.. |+++
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 4899999999964 359999999999999999999999999999999999999999999999999988776654 4679
Q ss_pred EEecCccccCcc-cHHHhcCCCC-------CC---C----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHH
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDPIG-------QY---S----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~-------~~---s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQr 1410 (1510)
+|+||++.+|.+ |+++|+.... .. + ++++.++++.+++.+. +|.++ .+||||||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-------~~~~~----~~LSgG~~ 151 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVD-------LDEKV----ANLSISHK 151 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCC-------cccch----hhCCHHHH
Confidence 999999988875 9999996311 11 1 2346677777777532 23333 36999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhH
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSR 1488 (1510)
Q Consensus 1411 Qrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1488 (1510)
||++|||||+++|+||||||||++||+.+...+.+.|++.. ++.|||+|+|+++.+.+ ||+|++|++|++++.|++++
T Consensus 152 qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (510)
T PRK09700 152 QMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSD 231 (510)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhh
Confidence 99999999999999999999999999999999999998864 47899999999999986 99999999999999999988
Q ss_pred Hhc
Q 000438 1489 LLE 1491 (1510)
Q Consensus 1489 Ll~ 1491 (1510)
++.
T Consensus 232 ~~~ 234 (510)
T PRK09700 232 VSN 234 (510)
T ss_pred CCH
Confidence 754
No 410
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=341.81 Aligned_cols=207 Identities=24% Similarity=0.397 Sum_probs=167.0
Q ss_pred cEEEeeeEEEccCCC--CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------
Q 000438 644 AVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------ 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------ 709 (1510)
.|+++|++++|++.. .+++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999996321 246999999999999999999999999999999999999999999998773
Q ss_pred -----EEEEcCCC--cCCCccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCc-ccccCCCCccChHHHHHH
Q 000438 710 -----TAYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQ-TEIGERGINLSGGQKQRI 778 (1510)
Q Consensus 710 -----iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~-t~ig~~g~~LSGGQkqRv 778 (1510)
++|++|+| .++..|++|||.|+.. ...+...+ + ..+-++.+ |.. .....+..+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~--~---~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE--K---ALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH--H---HHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 68999997 4667899999987632 11111111 0 11122222 211 123566789999999999
Q ss_pred HHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000438 779 QLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 779 ~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
+||||++.+|+++||||||++||+...+.+.+.+.+...+|+|+|++||+++++. .||++++|++|++++.|+++++.+
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999888665544446899999999999986 599999999999999999888764
No 411
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.3e-35 Score=331.08 Aligned_cols=198 Identities=31% Similarity=0.407 Sum_probs=157.7
Q ss_pred EEEeeeEEEccCCC-CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------
Q 000438 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------- 708 (1510)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 708 (1510)
++++|++++|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46889999996321 15799999999999999999999999999999999999999999998875
Q ss_pred --eEEEEcCCCcCCC-ccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHh
Q 000438 709 --TTAYVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1510)
Q Consensus 709 --~iayv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~ 785 (1510)
.++|++|++.++. .|++||+.++.........+ . .....+.++.+. ........+.+||||||||++||||++
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~-~-~~~~~~~l~~~~--l~~~~~~~~~~LS~G~~qrv~la~al~ 156 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKE-R-RERAEELLERVG--LGDRLNHYPSELSGGQQQRVAIARALA 156 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHH-H-HHHHHHHHHHcC--CchhhhcChhhcCHHHHHHHHHHHHHc
Confidence 3799999988765 59999999864321100000 0 011122233332 222345677899999999999999999
Q ss_pred cCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCEE
Q 000438 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREGMI 846 (1510)
Q Consensus 786 ~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~i 846 (1510)
.+|+++||||||++||+.+.+.+.+.+.+... +|+|+|++||+++++..||++++|++|++
T Consensus 157 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 157 NDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999876655444 48999999999998878999999999974
No 412
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.1e-35 Score=368.50 Aligned_cols=212 Identities=27% Similarity=0.396 Sum_probs=181.0
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHH-hhcce
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHD-LRSRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i 1345 (1510)
-|+++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999997665544 36789
Q ss_pred EEecCccccCcc-cHHHhcCCCC-------CCCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHH
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDPIG-------QYSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLL 1413 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~-------~~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl 1413 (1510)
+++||+|.+|.. |+++|+.... ..+. +++.++++..++.+. +|.++ .+||||||||+
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LSgG~~qrv 150 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFS-------SDKLV----GELSIGEQQMV 150 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCC-------ccCch----hhCCHHHHHHH
Confidence 999999988865 9999996421 1222 345667777776543 23333 36999999999
Q ss_pred HHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhc
Q 000438 1414 CLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1414 ~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
+|||||+.+|++|+|||||++||+++.+.+.+.|++.. ++.|||+|+|+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (501)
T PRK10762 151 EIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE 230 (501)
T ss_pred HHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH
Confidence 99999999999999999999999999999999998863 46899999999999976 99999999999999999887643
No 413
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.1e-35 Score=331.02 Aligned_cols=203 Identities=28% Similarity=0.420 Sum_probs=164.7
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------eE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------TT 710 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~i 710 (1510)
|+++|++++|++ +++++|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 468999999953 4799999999999999999999999999999999999999999999877 27
Q ss_pred EEEcCCCcCCC-ccHHHHHhcCCCCCh-hhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000438 711 AYVAQTSWIQN-GTIEENILFGLPMNR-AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1510)
Q Consensus 711 ayv~Q~~~i~~-~Tv~enI~fg~~~~~-~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~ 788 (1510)
+|++|++.++. .|++||+.++..... ....+.. ..-++.++ +.......++.+||||||||++||||++.+|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARL-----ERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHH-----HHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 99999997765 599999988754321 1111111 11122221 0112345677899999999999999999999
Q ss_pred CEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHH
Q 000438 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALL 856 (1510)
Q Consensus 789 ~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~ 856 (1510)
+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999987665544468999999999998765 9999999999999999887764
No 414
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=351.07 Aligned_cols=210 Identities=27% Similarity=0.397 Sum_probs=171.6
Q ss_pred CccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-----------E
Q 000438 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-----------T 710 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-----------i 710 (1510)
...++++|++++|++ .++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. +
T Consensus 17 ~~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i 93 (377)
T PRK11607 17 TPLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPI 93 (377)
T ss_pred CceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCE
Confidence 346999999999952 46999999999999999999999999999999999999999999999883 7
Q ss_pred EEEcCCCcCC-CccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000438 711 AYVAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1510)
Q Consensus 711 ayv~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~ 789 (1510)
|||+|++-++ ..||.|||.|+.........+..+ ...+-++.+... .....+..+|||||||||+|||||+.+|+
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~--~v~~~l~~l~L~--~~~~~~~~~LSgGq~QRVaLARAL~~~P~ 169 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS--RVNEMLGLVHMQ--EFAKRKPHQLSGGQRQRVALARSLAKRPK 169 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCCc--hhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999998876 569999999975321100111100 112223333222 23456778999999999999999999999
Q ss_pred EEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000438 790 IYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 790 i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
++|||||||+||+..++.+.+.+.+... .|.|+|+||||.+++. .||+|++|++|++++.|+++++.+.
T Consensus 170 lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 170 LLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 9999999999999999998876655443 4899999999999865 5999999999999999999998764
No 415
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-35 Score=313.45 Aligned_cols=207 Identities=29% Similarity=0.431 Sum_probs=176.8
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1510)
.++++|++..|.. ..+|++|||++++||+++++|+||+||||||++|.|..++.+|+|.++|.
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 5789999999963 57999999999999999999999999999999999999999999999984
Q ss_pred EEEEcCCCcCC-CccHHHHHhcCCCCChh-hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000438 710 TAYVAQTSWIQ-NGTIEENILFGLPMNRA-KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1510)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~~~~~-~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~ 787 (1510)
++||||.-.+| +.||+||+..|....+. ... ...+++-++.+|.-- ...+.++.+|||||||.++|||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~----~~~~e~v~~lFP~Lk-er~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQ----ERDLEEVYELFPRLK-ERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccccc----cccHHHHHHHChhHH-HHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 79999998887 67999999998543322 111 111445566777432 235678999999999999999999999
Q ss_pred CCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcc-ccCCEEEEEeCCEEEEecChHHHHhc
Q 000438 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFL-HNVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 788 ~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l-~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
|++++||||+.+|-|...++||+.+.+...+ |.||++|.++..+. +.+||.++|++|+|+.+|+.+|+.+.
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 9999999999999999999999876665544 67999999999985 56999999999999999999998764
No 416
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=5e-35 Score=331.61 Aligned_cols=206 Identities=25% Similarity=0.359 Sum_probs=165.9
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------E
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------T 710 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------i 710 (1510)
++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|..+|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYG---KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeC---CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 46889999995 347999999999999999999999999999999999999999999998762 7
Q ss_pred EEEcCCCcCCC-ccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000438 711 AYVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1510)
Q Consensus 711 ayv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~ 789 (1510)
+|++|++.++. .|++||+.++.+.......+..+ ....-++.+ |......+...+||||||||++||||++.+|+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 153 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREE--KLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALATNPK 153 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 89999987765 59999998754321100011000 112223333 22233466778999999999999999999999
Q ss_pred EEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 790 IYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 790 i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
++||||||++||+.+.+.+.+.+.+...+++|+|++||+++.+.. ||++++|++|++++.|+.+++..
T Consensus 154 llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 154 FLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999887655444468999999999988765 99999999999999999887653
No 417
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5e-35 Score=324.72 Aligned_cols=194 Identities=20% Similarity=0.357 Sum_probs=168.9
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 689999999964 35999999999999999999999999999999999999999999999999987654 456788999
Q ss_pred ecCccccCc-ccHHHhcCCCC----CCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccC
Q 000438 1348 IPQEPVLFE-GTVRSNIDPIG----QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKH 1422 (1510)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp~~----~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~ 1422 (1510)
+||++.++. .|+++|+.... ...++++.++++..++.++.... ...||+|||||++||||++++
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qrl~la~al~~~ 147 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGFEDVP-----------VRQLSAGQQRRVALARLWLTR 147 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHHhhCC-----------hhhcCHHHHHHHHHHHHHhcC
Confidence 999998886 59999995321 13456788899999997654332 246999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEE
Q 000438 1423 SRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVV 1475 (1510)
Q Consensus 1423 ~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL 1475 (1510)
|+||+|||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. .+|++++
T Consensus 148 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 148 APLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999999999864 47899999999999965 5677776
No 418
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=5.9e-35 Score=343.25 Aligned_cols=205 Identities=28% Similarity=0.420 Sum_probs=167.8
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eE
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TT 710 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~i 710 (1510)
..|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 3 ~~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i 79 (303)
T TIGR01288 3 VAIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAI 79 (303)
T ss_pred cEEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcE
Confidence 46899999999963 4699999999999999999999999999999999999999999999987 37
Q ss_pred EEEcCCCcCC-CccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhc
Q 000438 711 AYVAQTSWIQ-NGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQ 786 (1510)
Q Consensus 711 ayv~Q~~~i~-~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~ 786 (1510)
+|++|++.++ ..|++||+.+... .+....++ . ...-++.+... .....+..+||||||||++||||++.
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~---~--~~~ll~~~~l~--~~~~~~~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEA---V--IPSLLEFARLE--SKADVRVALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHH---H--HHHHHHHCCCh--hHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 9999998776 5799999975211 11111111 1 11122222211 12345677899999999999999999
Q ss_pred CCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 787 DCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 787 ~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
+|+++||||||++||+.+++.+.+.+.+...+|+|+|++||+++++.. ||+|++|++|+++..|+++++.+
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999987665554568999999999999865 99999999999999999988764
No 419
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-35 Score=331.37 Aligned_cols=201 Identities=25% Similarity=0.360 Sum_probs=163.3
Q ss_pred cEEEeeeEEEccCCC-CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------
Q 000438 644 AVEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------- 708 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 708 (1510)
.++++|+++.|++.. .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 589999999996422 24799999999999999999999999999999999999999999999986
Q ss_pred ---eEEEEcCCCcCCC-ccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHH
Q 000438 709 ---TTAYVAQTSWIQN-GTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1510)
Q Consensus 709 ---~iayv~Q~~~i~~-~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1510)
.++|++|++.++. .|++||+.++.. .+....++ ...+-++.+.. .....++..+||||||||++||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gl--~~~~~~~~~~LSgG~~qrl~la 157 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS-----RALEMLAAVGL--EHRANHRPSELSGGERQRVAIA 157 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCC--chhhhCChhhCCHHHHHHHHHH
Confidence 2799999987764 599999987432 11111111 11222333322 2234567789999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCEEEEecC
Q 000438 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREGMIVQSGR 851 (1510)
Q Consensus 782 Ral~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~ 851 (1510)
||++.+|+++||||||++||+.+.+.+.+.+.+... +|+|+|++||+++++..+|++++|++|++++.|+
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 158 RALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999998876555443 5899999999999998889999999999998765
No 420
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-35 Score=334.72 Aligned_cols=204 Identities=26% Similarity=0.366 Sum_probs=166.9
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC---------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG--------- 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g--------- 708 (1510)
..++++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 47999999999963 4699999999999999999999999999999999999987 589998876
Q ss_pred ------eEEEEcCCCcCCCccHHHHHhcCCCC----ChhhH----HHHHHHhchHHHHHhcccCCcccccCCCCccChHH
Q 000438 709 ------TTAYVAQTSWIQNGTIEENILFGLPM----NRAKY----GEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQ 774 (1510)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~~----~~~~~----~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 774 (1510)
.++|++|++.+++.|++|||.++... +.... .+.++.+++...+ ......++.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV-------KDKLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh-------HHHHhCCcccCCHHH
Confidence 27999999988889999999986421 11111 1112222221101 112345778999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChH
Q 000438 775 KQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYN 853 (1510)
Q Consensus 775 kqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~ 853 (1510)
||||+||||++.+|+++||||||++||+.+.+.+++.+.+. .+++|+|++||+++++.. ||++++|++|++++.|+.+
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 234 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINL-KESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTD 234 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999998755444 457999999999999765 9999999999999999998
Q ss_pred HHHh
Q 000438 854 ALLN 857 (1510)
Q Consensus 854 ~l~~ 857 (1510)
++.+
T Consensus 235 ~~~~ 238 (254)
T PRK14273 235 ELFF 238 (254)
T ss_pred HHHh
Confidence 8864
No 421
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-35 Score=334.40 Aligned_cols=209 Identities=30% Similarity=0.416 Sum_probs=167.0
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TTA 711 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ia 711 (1510)
++++|++++|++. +++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++| .++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4688999999631 4699999999999999999999999999999999999999999999887 269
Q ss_pred EEcCCCcCC-CccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000438 712 YVAQTSWIQ-NGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1510)
Q Consensus 712 yv~Q~~~i~-~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i 790 (1510)
|++|++.++ ..|++||+.++..+......+ . .....+.++.+.........+.+.+||||||||++||||++.+|++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~-~-~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~l 156 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEK-I-RERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADPPL 156 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHH-H-HHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999877 479999998763221100000 0 0112233343332211134567789999999999999999999999
Q ss_pred EEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000438 791 YLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 791 ~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
+||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++.+. .||+|++|++|++++.|+.+++.+
T Consensus 157 lllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 157 LLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred EEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999888766554443 899999999999875 489999999999999999887754
No 422
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-35 Score=333.61 Aligned_cols=203 Identities=24% Similarity=0.349 Sum_probs=166.9
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc---cCCcEEEECCe-----------
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH---KISGKVKVCGT----------- 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~---~~~G~i~~~g~----------- 709 (1510)
.|+++|+++.|+. +++|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|.
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 4789999999962 479999999999999999999999999999999999974 69999999872
Q ss_pred --EEEEcCCCcCCCccHHHHHhcCCCCC-----hh----hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHH
Q 000438 710 --TAYVAQTSWIQNGTIEENILFGLPMN-----RA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRI 778 (1510)
Q Consensus 710 --iayv~Q~~~i~~~Tv~enI~fg~~~~-----~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 778 (1510)
++|++|++.+++.|++||+.++.... .. +..+.++.+++...+. ....+++.+|||||||||
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVK-------DKLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhh-------HHhcCCcccCCHHHHHHH
Confidence 79999999988899999998763211 01 1122223333321111 124567789999999999
Q ss_pred HHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000438 779 QLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 779 ~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
+||||++++|+++||||||++||+.+...+.+.+.+ ..+++|+|++||+++.+. .||++++|++|++++.|+.+++.+
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKE-LSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHH-HhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999999999999888765544 345899999999999886 499999999999999999988764
No 423
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=6.2e-35 Score=333.82 Aligned_cols=208 Identities=30% Similarity=0.413 Sum_probs=166.3
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccC-----CcEEEECC----------
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKI-----SGKVKVCG---------- 708 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~-----~G~i~~~g---------- 708 (1510)
+++++|++++|++ .++++|+||+|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|
T Consensus 1 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~ 77 (247)
T TIGR00972 1 AIEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDV 77 (247)
T ss_pred CEEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccch
Confidence 4789999999963 46999999999999999999999999999999999999998 99999876
Q ss_pred -----eEEEEcCCCcCCCccHHHHHhcCCCCChh-hHHHHHHHhchHHHHHhcccCC--cccccCCCCccChHHHHHHHH
Q 000438 709 -----TTAYVAQTSWIQNGTIEENILFGLPMNRA-KYGEVVRVCCLEKDLEMMEYGD--QTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 709 -----~iayv~Q~~~i~~~Tv~enI~fg~~~~~~-~~~~v~~~~~l~~dl~~l~~gd--~t~ig~~g~~LSGGQkqRv~L 780 (1510)
.++|++|+++++..|++||+.++...... ...+..+. ...-++.+.... .........+||||||||++|
T Consensus 78 ~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~--~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~l 155 (247)
T TIGR00972 78 VELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEI--VEESLKKAALWDEVKDRLHDSALGLSGGQQQRLCI 155 (247)
T ss_pred HHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHH--HHHHHHHcCCCcchhhHhhCCcccCCHHHHHHHHH
Confidence 27899999988889999999876322110 00111111 111122222210 023466788999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|||++.+|+++||||||++||+.+...+++.+.+ ..+++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 156 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~-~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 156 ARALAVEPEVLLLDEPTSALDPIATGKIEELIQE-LKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH-HHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999999998765544 3345899999999998865 99999999999999999888764
No 424
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=5.9e-35 Score=351.00 Aligned_cols=205 Identities=24% Similarity=0.391 Sum_probs=169.5
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------eE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------TT 710 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~i 710 (1510)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| ++
T Consensus 3 ~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 588999999996 35799999999999999999999999999999999999999999999988 27
Q ss_pred EEEcCCCcC-CCccHHHHHhcCCC-C----C--hhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHH
Q 000438 711 AYVAQTSWI-QNGTIEENILFGLP-M----N--RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLAR 782 (1510)
Q Consensus 711 ayv~Q~~~i-~~~Tv~enI~fg~~-~----~--~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 782 (1510)
|||+|++-+ ++.|++||+.+|.. + . ....++ ...+-++.+... ........+||||||||++|||
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~-----~v~~~le~vgl~--~~~~~~~~~LSgGerQRv~IAr 152 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRA-----AVERAMERTGVA--QFADRPVTSLSGGERQRVLLAR 152 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHH-----HHHHHHHHcCCc--hhhcCChhhCCHHHHHHHHHHH
Confidence 999999876 67899999998752 1 1 111111 111222222222 1234567899999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000438 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 783 al~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
||+++|+++||||||++||+.....+++.+.+...+|+|+|++||+++.+. .||++++|++|++++.|+++++++.
T Consensus 153 AL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 153 ALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 999999999999999999999999998765554446899999999999985 5999999999999999999998753
No 425
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=4.6e-35 Score=327.44 Aligned_cols=193 Identities=35% Similarity=0.525 Sum_probs=154.3
Q ss_pred EeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------EEEEcCCCc
Q 000438 647 VRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------TAYVAQTSW 718 (1510)
Q Consensus 647 ~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------iayv~Q~~~ 718 (1510)
++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|+.+|++|+|.++|. ++|++|++.
T Consensus 2 ~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~ 78 (213)
T cd03235 2 VEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRS 78 (213)
T ss_pred cccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccc
Confidence 5789999953 46999999999999999999999999999999999999999999999883 899999986
Q ss_pred C---CCccHHHHHhcCCCCC-------hhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCC
Q 000438 719 I---QNGTIEENILFGLPMN-------RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDC 788 (1510)
Q Consensus 719 i---~~~Tv~enI~fg~~~~-------~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~ 788 (1510)
+ ++.|++||+.++.... .+..++ ....-++.+.. .........+||||||||++||||++.+|
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l--~~~~~~~~~~LSgG~~qrv~la~al~~~p 151 (213)
T cd03235 79 IDRDFPISVRDVVLMGLYGHKGLFRRLSKADKA-----KVDEALERVGL--SELADRQIGELSGGQQQRVLLARALVQDP 151 (213)
T ss_pred cccCCCCcHHHHHHhccccccccccCCCHHHHH-----HHHHHHHHcCC--HHHHhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 5 4579999998864311 010000 11112222211 11234567789999999999999999999
Q ss_pred CEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEec
Q 000438 789 DIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1510)
Q Consensus 789 ~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1510)
+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++++.. ||++++|++| +++.|
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 152 DLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999987665544468999999999999865 8999999886 55443
No 426
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=6.1e-35 Score=366.38 Aligned_cols=213 Identities=16% Similarity=0.193 Sum_probs=186.0
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
-|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+..++|++++
T Consensus 3 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 3 SLQISQGTFRLSD--TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred eEEEEeEEEEcCC--eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 3899999999964 34999999999999999999999999999999999999999999999999888777778888899
Q ss_pred EecCcccc--C-------cccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1347 IIPQEPVL--F-------EGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1347 iIpQdp~L--F-------~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
++||+|.+ + .-|+++|+... ...++++.++++..++.+.....+ ..||||||||++|||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~la~ 148 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDE-VKDPARCEQLAQQFGITALLDRRF-----------KYLSTGETRKTLLCQ 148 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccc-hhHHHHHHHHHHHcCCHhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 99999753 2 35899998632 223566888999998876544333 358999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
||+++|++|+|||||++||+++.+.+.+.|++.. ++.|||+|+|+++.+.+ ||+|++|++|++++.|+++++++++
T Consensus 149 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 226 (490)
T PRK10938 149 ALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA 226 (490)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch
Confidence 9999999999999999999999999999998864 36899999999999987 9999999999999999999887643
No 427
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-35 Score=332.89 Aligned_cols=197 Identities=27% Similarity=0.338 Sum_probs=163.3
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------eEEEEc
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------TTAYVA 714 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------~iayv~ 714 (1510)
..|+++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++| .++|++
T Consensus 11 ~~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~ 87 (257)
T PRK11247 11 TPLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMF 87 (257)
T ss_pred CcEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEe
Confidence 46999999999963 4799999999999999999999999999999999999999999999877 379999
Q ss_pred CCCcCCC-ccHHHHHhcCCCCC-hhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEE
Q 000438 715 QTSWIQN-GTIEENILFGLPMN-RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYL 792 (1510)
Q Consensus 715 Q~~~i~~-~Tv~enI~fg~~~~-~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~l 792 (1510)
|++.++. .|++||+.++.... .++..+.++..++ ......++.+||||||||++||||++.+|+++|
T Consensus 88 q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgGqkqrl~laraL~~~p~lll 156 (257)
T PRK11247 88 QDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGL-----------ADRANEWPAALSGGQKQRVALARALIHRPGLLL 156 (257)
T ss_pred cCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCC-----------hhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9987765 79999999864211 1112222222222 123456778999999999999999999999999
Q ss_pred EeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChH
Q 000438 793 LDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYN 853 (1510)
Q Consensus 793 LDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~ 853 (1510)
|||||++||+.+.+.+.+.+.+... .++|+|++||+++++. .||+|++|++|++++.|+.+
T Consensus 157 LDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 157 LDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999998876554433 4899999999999976 49999999999999887654
No 428
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-35 Score=375.88 Aligned_cols=219 Identities=25% Similarity=0.369 Sum_probs=181.2
Q ss_pred eEEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCC----------
Q 000438 1267 NVDLIDLQVRYRSN--TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDIS---------- 1334 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~--~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~---------- 1334 (1510)
-|+++|++++|+.. ..++|+||||+|++||++||||+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 59999999999642 235999999999999999999999999999999999999999999999998652
Q ss_pred CCCHH---Hhh-cceEEecCcc--ccCc-ccHHHhcCCC----CCCC----HHHHHHHHHHcCchHHHHhCcCCcccccc
Q 000438 1335 LLGLH---DLR-SRFGIIPQEP--VLFE-GTVRSNIDPI----GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVA 1399 (1510)
Q Consensus 1335 ~i~l~---~LR-~~i~iIpQdp--~LF~-gTIR~NLdp~----~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~ 1399 (1510)
+.+.. .+| ++|++|+|+| .++. -||++|+... ...+ ++++.++|+.++|.+.- .-++..
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----~~~~~~-- 165 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQ----TILSRY-- 165 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChh----hHHhCC--
Confidence 22222 334 5799999999 5776 4999999521 1122 24577788888884310 011222
Q ss_pred CCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcC--CceEEEEecChhhhhh-cCEEEEEe
Q 000438 1400 DSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFA--ACTIISIAHRIPTVMD-CDRVIVVD 1476 (1510)
Q Consensus 1400 e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~--~~TvI~IAHRl~ti~~-~DrIlVL~ 1476 (1510)
..+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||||++|+
T Consensus 166 --~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 166 --PHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred --CccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 236899999999999999999999999999999999999999999998652 7899999999999977 99999999
Q ss_pred CCEEEEecChhHHhcCC
Q 000438 1477 AGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1477 ~G~ivE~gsp~~Ll~~~ 1493 (1510)
+|++++.|+++++++++
T Consensus 244 ~G~i~~~g~~~~~~~~~ 260 (623)
T PRK10261 244 QGEAVETGSVEQIFHAP 260 (623)
T ss_pred CCeecccCCHHHhhcCC
Confidence 99999999999998755
No 429
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-35 Score=330.39 Aligned_cols=209 Identities=29% Similarity=0.421 Sum_probs=167.3
Q ss_pred EEEeeeEEEccCCC-CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000438 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1510)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1510)
|+++|++++|++.. ..++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68899999996321 127999999999999999999999999999999999999999999998762
Q ss_pred --EEEEcCCCcCCC-ccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhc
Q 000438 710 --TAYVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQ 786 (1510)
Q Consensus 710 --iayv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~ 786 (1510)
++|++|++.++. .|++||+.++............ ....+.++.+.. .........+||||||||++||||++.
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~--~~~~~~l~~~~l--~~~~~~~~~~LS~G~~qrv~la~al~~ 157 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIE--ERVLELLELVGL--EDKADAYPAQLSGGQKQRVGIARALAN 157 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHH--HHHHHHHHHCCC--hhhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 799999998775 7999999875321100001110 111223333322 223456778999999999999999999
Q ss_pred CCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 787 DCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 787 ~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
+|+++||||||++||+.+.+.+++.+.+...+ |+|+|++||+++.+.. ||++++|++|++++.|+.+++.+
T Consensus 158 ~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 158 NPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred CCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999998766554444 8999999999999865 99999999999999998877653
No 430
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-35 Score=338.79 Aligned_cols=207 Identities=27% Similarity=0.430 Sum_probs=168.5
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1510)
..|+++|++++|+. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 4 ~~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~ 81 (283)
T PRK13636 4 YILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLR 81 (283)
T ss_pred ceEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHH
Confidence 36899999999952 346999999999999999999999999999999999999999999999872
Q ss_pred --EEEEcCCC--cCCCccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHH
Q 000438 710 --TAYVAQTS--WIQNGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLAR 782 (1510)
Q Consensus 710 --iayv~Q~~--~i~~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 782 (1510)
++|++|++ .+++.|++||+.++... ......+. ...-++.+.. ......++.+||||||||++|||
T Consensus 82 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL--~~~~~~~~~~LS~G~~qrl~lar 154 (283)
T PRK13636 82 ESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRTGI--EHLKDKPTHCLSFGQKKRVAIAG 154 (283)
T ss_pred hhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHCCC--hhhhhCCcccCCHHHHHHHHHHH
Confidence 69999998 46788999999875321 11111010 1111222211 12235678899999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000438 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 783 al~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
||+.+|+++||||||++||+...+.+++.+.+...+ |+|+|++||+++++. .||++++|++|++++.|+++++.+.
T Consensus 155 aL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 155 VLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999988765544444 899999999999987 5999999999999999999988653
No 431
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.6e-35 Score=345.41 Aligned_cols=211 Identities=24% Similarity=0.358 Sum_probs=169.9
Q ss_pred CccEEEeeeEEEccCCC----------CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---
Q 000438 642 NIAVEVRDGVFSWDDEN----------GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--- 708 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~----------~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--- 708 (1510)
+..++++|++++|+... ..++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 35789999999996321 24689999999999999999999999999999999999999999999876
Q ss_pred -------------eEEEEcCCCc--C-CCccHHHHHhcCCC-----CChhhHHHHHHHhchHHHHHhcccCCcccccCCC
Q 000438 709 -------------TTAYVAQTSW--I-QNGTIEENILFGLP-----MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERG 767 (1510)
Q Consensus 709 -------------~iayv~Q~~~--i-~~~Tv~enI~fg~~-----~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g 767 (1510)
.++||+|+|. + +..||.|||.++.. .+++..++.. .+-++.+... .......+
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~-----~~~l~~vgl~-~~~~~~~p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRV-----KAMMLKVGLL-PNLINRYP 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCC-hHHhcCCc
Confidence 3799999983 4 46899999976421 2221111111 1112222211 11245678
Q ss_pred CccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCE
Q 000438 768 INLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGM 845 (1510)
Q Consensus 768 ~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~ 845 (1510)
.+|||||||||+||||++.+|+++|+||||++||+.++..+.+.+.+... .|.|+|+||||++.+.. ||+|++|++|+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ 239 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGH 239 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 89999999999999999999999999999999999999999876655444 38999999999999875 99999999999
Q ss_pred EEEecChHHHHhc
Q 000438 846 IVQSGRYNALLNS 858 (1510)
Q Consensus 846 i~~~g~~~~l~~~ 858 (1510)
|++.|+.+++.+.
T Consensus 240 ive~g~~~~i~~~ 252 (331)
T PRK15079 240 AVELGTYDEVYHN 252 (331)
T ss_pred EEEEcCHHHHHcC
Confidence 9999999998764
No 432
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=6e-35 Score=327.76 Aligned_cols=202 Identities=21% Similarity=0.318 Sum_probs=160.6
Q ss_pred EEEeeeEEEccCCCC-ccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eEE
Q 000438 645 VEVRDGVFSWDDENG-EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TTA 711 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~ia 711 (1510)
++++|++++|++... .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 688999999964211 2699999999999999999999999999999999999999999999987 379
Q ss_pred EEcCCCcCCC-ccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000438 712 YVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1510)
Q Consensus 712 yv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i 790 (1510)
|++|++.++. .|++||+.+..........+..+ ...+.++.+. ......+++.+||||||||++||||++.+|++
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~--~~~~~l~~~~--l~~~~~~~~~~LS~G~~qrv~laral~~~p~i 157 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA--RLEELADRLG--MEELLDRRVGGFSTGMRQKVAIARALVHDPPV 157 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcC--CHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCE
Confidence 9999998766 59999997642211000111111 1112233332 22334567889999999999999999999999
Q ss_pred EEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEec
Q 000438 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1510)
Q Consensus 791 ~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1510)
+||||||++||+.+.+.+.+.+.+...+|+|+|++||+++++.. +|++++|++|++++.|
T Consensus 158 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 158 LLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred EEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 99999999999999999887665544568999999999998765 8999999999998654
No 433
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=7.5e-35 Score=327.44 Aligned_cols=198 Identities=26% Similarity=0.422 Sum_probs=162.3
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------EEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------TAY 712 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------iay 712 (1510)
++++|+++.|++. .+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|. ++|
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEE
Confidence 4688999999632 257999999999999999999999999999999999999999999999873 699
Q ss_pred EcCCCcCC-CccHHHHHhcCCC---CCh----hhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHH
Q 000438 713 VAQTSWIQ-NGTIEENILFGLP---MNR----AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1510)
Q Consensus 713 v~Q~~~i~-~~Tv~enI~fg~~---~~~----~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal 784 (1510)
++|++.++ ..|++||+.++.. ... ++..+.++.+++. ........+||||||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLT-----------DKANKRARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH-----------HHHhChhhhCCHHHHHHHHHHHHH
Confidence 99998776 6899999987431 111 1112222222221 123455678999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHH
Q 000438 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNAL 855 (1510)
Q Consensus 785 ~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 855 (1510)
+.+|+++||||||++||+.+.+.+.+.+.+ ..+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILE-VRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHH-HhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 999999999999999999999998865544 3456999999999999865 999999999999999987764
No 434
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-35 Score=338.59 Aligned_cols=203 Identities=32% Similarity=0.435 Sum_probs=162.5
Q ss_pred EEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------------
Q 000438 646 EVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG----------------- 708 (1510)
Q Consensus 646 ~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g----------------- 708 (1510)
.++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 3456677764 34689999999999999999999999999999999999999999999876
Q ss_pred eEEEEcCCCcCC-CccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHH
Q 000438 709 TTAYVAQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1510)
Q Consensus 709 ~iayv~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal 784 (1510)
.++|++|++.++ +.|++||+.++... +.....+ ...+.++.+.. ...+.....+||||||||++||||+
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l--~~~~~~~~~~LS~Gq~qrv~lAral 175 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREE-----RAAEALELVGL--EGWEHKYPDELSGGMQQRVGLARAL 175 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCC--HhHhhCCcccCCHHHHHHHHHHHHH
Confidence 379999999877 57999999875321 1111111 01112222221 1224556778999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000438 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 785 ~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
+.+|+++||||||++||+.+.+.+.+.+.+... .|+|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 176 ~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 176 AVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999876655433 38999999999998764 999999999999999999888653
No 435
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=7.1e-35 Score=329.48 Aligned_cols=204 Identities=28% Similarity=0.386 Sum_probs=159.7
Q ss_pred EEEeeeEEEccCCC-CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------
Q 000438 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------- 708 (1510)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 708 (1510)
++++|++++|++.. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68899999996321 13699999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCc--C-CCccHHHHHhcCCCCC-hhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHH
Q 000438 709 -TTAYVAQTSW--I-QNGTIEENILFGLPMN-RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1510)
Q Consensus 709 -~iayv~Q~~~--i-~~~Tv~enI~fg~~~~-~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARa 783 (1510)
.++|++|++. + ...|++||+.++.... .....+..+.. ....++.+... ......+..+||||||||++||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~-~~~~l~~~~l~-~~~~~~~~~~LS~G~~qrv~lara 159 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEA-VLLLLVGVGLP-EEVLNRYPHELSGGQRQRVAIARA 159 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHH-HHHHHHHCCCC-hhHhhCCchhcCHHHHHHHHHHHH
Confidence 3799999983 3 4689999998652211 00001111110 01223333221 123466788999999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccc-cCCEEEEEeCCEEEEec
Q 000438 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSG 850 (1510)
Q Consensus 784 l~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g 850 (1510)
++.+|+++||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++.+. .||+|++|++|++++.|
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 160 LALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999988766554444 899999999999987 59999999999998654
No 436
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=7.2e-35 Score=325.92 Aligned_cols=196 Identities=30% Similarity=0.454 Sum_probs=160.0
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------eEEEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------TTAYV 713 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------~iayv 713 (1510)
|+++|++++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .++|+
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~ 77 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMV 77 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEE
Confidence 468999999963 4799999999999999999999999999999999999999999999987 37999
Q ss_pred cCCCcCC-CccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000438 714 AQTSWIQ-NGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1510)
Q Consensus 714 ~Q~~~i~-~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~ 789 (1510)
+|++.++ +.|++||+.++... ..+..++. ....++.+. ..........+||||||||++||||++.+|+
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~--l~~~~~~~~~~LS~G~~qr~~laral~~~p~ 150 (213)
T cd03301 78 FQNYALYPHMTVYDNIAFGLKLRKVPKDEIDER-----VREVAELLQ--IEHLLDRKPKQLSGGQRQRVALGRAIVREPK 150 (213)
T ss_pred ecChhhccCCCHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcC--CHHHHhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999876 56999999876321 11111111 111222222 2223456778999999999999999999999
Q ss_pred EEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCEEEEec
Q 000438 790 IYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1510)
Q Consensus 790 i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1510)
++||||||++||+++.+.+++.+.+... .|+|+|++||+++++.. ||+|++|++|++++.|
T Consensus 151 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 151 VFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999876655444 48999999999998765 8999999999998765
No 437
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=337.53 Aligned_cols=208 Identities=28% Similarity=0.403 Sum_probs=169.3
Q ss_pred CccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCC---cEEEECC----------
Q 000438 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKIS---GKVKVCG---------- 708 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~---G~i~~~g---------- 708 (1510)
+..++++|+++.|++. .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++ |+|.++|
T Consensus 3 ~~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~ 81 (282)
T PRK13640 3 DNIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWD 81 (282)
T ss_pred CceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHH
Confidence 3568999999999632 3469999999999999999999999999999999999999988 8999877
Q ss_pred ---eEEEEcCCCc--CCCccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHH
Q 000438 709 ---TTAYVAQTSW--IQNGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 709 ---~iayv~Q~~~--i~~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1510)
.++|++|++. +++.|++|||.|+... +.+...+.+ ..-++.+.. ....+....+||||||||++|
T Consensus 82 ~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~l~~~~L--~~~~~~~~~~LS~G~~qrv~l 154 (282)
T PRK13640 82 IREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIV-----RDVLADVGM--LDYIDSEPANLSGGQKQRVAI 154 (282)
T ss_pred HHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHH-----HHHHHHCCC--hhHhcCCcccCCHHHHHHHHH
Confidence 2799999984 6688999999986432 111111111 111222211 123456778999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHh
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|||++++|+++||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++.+..||++++|++|++++.|+++++.+
T Consensus 155 aral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 155 AGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999998766544443 899999999999987899999999999999999988765
No 438
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=9e-35 Score=344.51 Aligned_cols=206 Identities=27% Similarity=0.411 Sum_probs=169.2
Q ss_pred CccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------
Q 000438 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------ 709 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------ 709 (1510)
...|+++|++++|+ +..+|+|+||+|++||+++++||||||||||+++|+|+++|++|+|.++|.
T Consensus 39 ~~~i~i~nl~k~y~---~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ 115 (340)
T PRK13536 39 TVAIDLAGVSKSYG---DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARAR 115 (340)
T ss_pred ceeEEEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhcc
Confidence 35799999999996 346999999999999999999999999999999999999999999999873
Q ss_pred EEEEcCCCcCC-CccHHHHHhcCCC-C--ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHh
Q 000438 710 TAYVAQTSWIQ-NGTIEENILFGLP-M--NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1510)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~-~--~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~ 785 (1510)
+||+||++.++ ..|++||+.+... + +.....+.. ..-++.+...+ ....+..+||||||||++|||||+
T Consensus 116 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~~L~~--~~~~~~~~LS~G~kqrv~lA~aL~ 188 (340)
T PRK13536 116 IGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFARLES--KADARVSDLSGGMKRRLTLARALI 188 (340)
T ss_pred EEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHcCCch--hhCCChhhCCHHHHHHHHHHHHHh
Confidence 79999998775 6799999975321 1 111111111 11122222221 234567789999999999999999
Q ss_pred cCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 786 ~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
.+|+++||||||++||+.+++.+++.+.+...+|+|+|++||+++.+.. ||+|++|++|+++..|+++++.+
T Consensus 189 ~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 189 NDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999987766555568999999999999865 99999999999999999999865
No 439
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.2e-34 Score=366.69 Aligned_cols=219 Identities=26% Similarity=0.430 Sum_probs=182.9
Q ss_pred eEEEEEEEEEecCC--CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC-----CCcEEEEcCeeCCCCCHH
Q 000438 1267 NVDLIDLQVRYRSN--TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP-----SGGRIIIDGIDISLLGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~--~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i~l~ 1339 (1510)
-++++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999642 23699999999999999999999999999999999999987 799999999999877654
Q ss_pred H---hh-cceEEecCccc--cCc-ccHHHhcCC----CCCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCC
Q 000438 1340 D---LR-SRFGIIPQEPV--LFE-GTVRSNIDP----IGQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN 1404 (1510)
Q Consensus 1340 ~---LR-~~i~iIpQdp~--LF~-gTIR~NLdp----~~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1404 (1510)
+ .| ++++++||+|. ++. -|+++|+.. ....+ ++++.++++.+++.+.... +|.. ..+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~----~~~~----~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKR----LTDY----PHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH----HhhC----Ccc
Confidence 3 33 57999999985 443 489998751 11122 3567788999888642110 1222 236
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEE
Q 000438 1405 WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAK 1481 (1510)
Q Consensus 1405 LS~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~iv 1481 (1510)
||||||||++|||||+.+|++|+||||||+||+.+.+.+.+.|++.. .+.|||+|+|+++.+.+ ||||++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 89999999999999999999999999999999999999999999864 37899999999999876 9999999999999
Q ss_pred EecChhHHhcCC
Q 000438 1482 EFGKPSRLLERP 1493 (1510)
Q Consensus 1482 E~gsp~~Ll~~~ 1493 (1510)
+.|+++++++.+
T Consensus 237 ~~g~~~~~~~~~ 248 (529)
T PRK15134 237 EQNRAATLFSAP 248 (529)
T ss_pred EeCCHHHHhhCC
Confidence 999999998654
No 440
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1e-34 Score=315.11 Aligned_cols=166 Identities=33% Similarity=0.587 Sum_probs=151.0
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------EEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------TAY 712 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------iay 712 (1510)
|+++|++++|+.. .+++++|+||++++||+++|+|+||||||||+++|+|+.+|++|+|.++|. ++|
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEE
Confidence 4688999999642 236999999999999999999999999999999999999999999999883 799
Q ss_pred EcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEE
Q 000438 713 VAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYL 792 (1510)
Q Consensus 713 v~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~l 792 (1510)
++|++++++.|++||+ +.+||||||||++||||++.+|+++|
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999998889999998 46799999999999999999999999
Q ss_pred EeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCEEEEec
Q 000438 793 LDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSG 850 (1510)
Q Consensus 793 LDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g 850 (1510)
|||||++||+++.+.+++.+.+. .+++|+|++||++++++.+|++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~-~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEV-LKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHH-cCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999988765544 4689999999999999889999999999998754
No 441
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9e-35 Score=320.69 Aligned_cols=194 Identities=27% Similarity=0.469 Sum_probs=171.0
Q ss_pred eEEEEEEEEEecCCC-------CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHH
Q 000438 1267 NVDLIDLQVRYRSNT-------PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH 1339 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~-------~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~ 1339 (1510)
-++.+|++..|+... -.+++||||+|++||.+||||.|||||||+.++|.|+++|++|+|+++|.|+..++
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~-- 81 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLS-- 81 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcc--
Confidence 478899999997532 26899999999999999999999999999999999999999999999999987766
Q ss_pred HhhcceEEecCccccCcccHHHhcCCCCCCCHHHHHHHHHHcCchH-HHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1340 DLRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKD-VVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1340 ~LR~~i~iIpQdp~LF~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~-~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
.+..++++.+.|+++|+.+ +..+-|. .||||||||++||||
T Consensus 82 ---------------------------~~~~~~~v~elL~~Vgl~~~~~~ryPh-----------elSGGQrQRi~IARA 123 (268)
T COG4608 82 ---------------------------KEERRERVLELLEKVGLPEEFLYRYPH-----------ELSGGQRQRIGIARA 123 (268)
T ss_pred ---------------------------hhHHHHHHHHHHHHhCCCHHHhhcCCc-----------ccCchhhhhHHHHHH
Confidence 2234567999999999876 4444443 579999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc--CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC-c
Q 000438 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEF--AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP-S 1494 (1510)
Q Consensus 1419 LLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f--~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~-~ 1494 (1510)
|.-+|+++|+|||||+||.-..++|.+.+++.- .+-|.+.|||+++.+.. ||||.||..|+|+|.|+.+++++++ -
T Consensus 124 Lal~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~~~~p~H 203 (268)
T COG4608 124 LALNPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEVFSNPLH 203 (268)
T ss_pred HhhCCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHHhhCCCC
Confidence 999999999999999999999999999998753 37899999999999998 9999999999999999999999988 5
Q ss_pred HHHHHH
Q 000438 1495 LFGALV 1500 (1510)
Q Consensus 1495 ~f~~lv 1500 (1510)
.|-+..
T Consensus 204 pYTk~L 209 (268)
T COG4608 204 PYTKAL 209 (268)
T ss_pred HHHHHH
Confidence 665544
No 442
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=335.12 Aligned_cols=207 Identities=29% Similarity=0.472 Sum_probs=168.9
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------e
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------T 709 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ 709 (1510)
..++++|++++|++ .++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 6 ~~l~~~nl~~~~~~-~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 84 (271)
T PRK13632 6 VMIKVENVSFSYPN-SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKK 84 (271)
T ss_pred eEEEEEeEEEEcCC-CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcc
Confidence 46899999999963 235799999999999999999999999999999999999999999999877 2
Q ss_pred EEEEcCCC--cCCCccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHH
Q 000438 710 TAYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1510)
Q Consensus 710 iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal 784 (1510)
++|++|++ .+++.|++||+.++.. ++.+..++. ..+-++.+.. ......+..+||||||||++||||+
T Consensus 85 i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~~l--~~~~~~~~~~LS~G~~qrl~laral 157 (271)
T PRK13632 85 IGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDI-----IDDLAKKVGM--EDYLDKEPQNLSGGQKQRVAIASVL 157 (271)
T ss_pred eEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHcCC--HHHhhCCcccCCHHHHHHHHHHHHH
Confidence 79999998 4567899999988632 222211111 1112222211 1234567789999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHh
Q 000438 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 785 ~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
+.+|+++||||||++||+.+.+.+++.+.+...+ ++|+|++||+++.+..||++++|++|++++.|+.+++.+
T Consensus 158 ~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 158 ALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999998766554444 589999999999887899999999999999999887754
No 443
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.2e-34 Score=326.11 Aligned_cols=196 Identities=27% Similarity=0.393 Sum_probs=158.4
Q ss_pred EEEeeeEEEccCCC-CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------
Q 000438 645 VEVRDGVFSWDDEN-GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------- 708 (1510)
Q Consensus 645 i~~~~~~f~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 708 (1510)
++++|++++|++.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68899999996322 24699999999999999999999999999999999999999999999876
Q ss_pred --eEEEEcCCCcCC-CccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHH
Q 000438 709 --TTAYVAQTSWIQ-NGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLAR 782 (1510)
Q Consensus 709 --~iayv~Q~~~i~-~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 782 (1510)
.++|++|++.++ +.|++||+.++.. .+.....+. ..+.++.+.. .........+||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l--~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKER-----AYEMLEKVGL--EHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcCC--hhhhhCChhhCCHHHHHHHHHHH
Confidence 279999998776 5799999987532 111111110 1122233322 22345667899999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCEEE
Q 000438 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREGMIV 847 (1510)
Q Consensus 783 al~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~i~ 847 (1510)
|++.+|+++||||||++||+++.+.+.+.+.+... .++|+|++||+++++..+|++++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999876554443 489999999999998889999999999985
No 444
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=335.80 Aligned_cols=204 Identities=29% Similarity=0.416 Sum_probs=168.7
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------E
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------T 710 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------i 710 (1510)
.++++|++++|+.....++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 589999999997433346999999999999999999999999999999999999999999999872 7
Q ss_pred EEEcCCCc--CCCccHHHHHhcCCCC---Chhh----HHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHH
Q 000438 711 AYVAQTSW--IQNGTIEENILFGLPM---NRAK----YGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1510)
Q Consensus 711 ayv~Q~~~--i~~~Tv~enI~fg~~~---~~~~----~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1510)
+|++|+|. ++..|+.|||.++... ..+. .++.++.+++. ........+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNML-----------DFKTREPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCH-----------hHhhCCcccCCHHHHHHHHHH
Confidence 99999983 6678999999876321 1111 11222222221 123456788999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000438 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 782 Ral~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
||++.+|+++||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++++..||+|++|++|++++.|+++++...
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999998765544444 8999999999999888999999999999999999888653
No 445
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.3e-34 Score=329.84 Aligned_cols=203 Identities=28% Similarity=0.417 Sum_probs=166.6
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------e
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------------T 709 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------~ 709 (1510)
++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~---~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFG---PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEEC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 68899999995 25799999999999999999999999999999999999999999999887 2
Q ss_pred EEEEcCCCcCC-CccHHHHHhcCCC----CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHH
Q 000438 710 TAYVAQTSWIQ-NGTIEENILFGLP----MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1510)
Q Consensus 710 iayv~Q~~~i~-~~Tv~enI~fg~~----~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal 784 (1510)
++|++|++.++ ..|++||+.++.. .+.....+ ...+.++.+ |.......+..+||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 79999998766 5799999988631 11111111 111222322 222334567789999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 785 ~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
+.+|++++|||||++||+++.+.+.+.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+++++.+
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIK 225 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhc
Confidence 99999999999999999999999987554444458999999999999865 99999999999999999888764
No 446
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=333.26 Aligned_cols=206 Identities=29% Similarity=0.401 Sum_probs=167.3
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC---------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG--------- 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g--------- 708 (1510)
..++++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 12 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 12 SKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred ceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 56899999999963 479999999999999999999999999999999999986 5899998876
Q ss_pred ------eEEEEcCCCcCCCccHHHHHhcCCCC----ChhhHHHHHHHhchHHHHHhcccC--CcccccCCCCccChHHHH
Q 000438 709 ------TTAYVAQTSWIQNGTIEENILFGLPM----NRAKYGEVVRVCCLEKDLEMMEYG--DQTEIGERGINLSGGQKQ 776 (1510)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~~----~~~~~~~v~~~~~l~~dl~~l~~g--d~t~ig~~g~~LSGGQkq 776 (1510)
.++|++|++.++..|++||+.++... +.+..++. ..+-++.+... .....+++..+|||||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~q 163 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDER-----VEWALTKAALWNEVKDKLHQSGYSLSGGQQQ 163 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHH-----HHHHHHHcCCChhhHHHHhcCCCCCCHHHHH
Confidence 37899999988889999999886421 11111111 11112222111 113356778899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHH
Q 000438 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNAL 855 (1510)
Q Consensus 777 Rv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 855 (1510)
|++||||++.+|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++.+.. ||++++|++|++++.|+.+++
T Consensus 164 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 242 (260)
T PRK10744 164 RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITEL-KQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTI 242 (260)
T ss_pred HHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHH-hcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999887655544 457899999999999864 999999999999999999887
Q ss_pred Hh
Q 000438 856 LN 857 (1510)
Q Consensus 856 ~~ 857 (1510)
.+
T Consensus 243 ~~ 244 (260)
T PRK10744 243 FT 244 (260)
T ss_pred Hh
Confidence 64
No 447
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-35 Score=339.45 Aligned_cols=212 Identities=25% Similarity=0.359 Sum_probs=166.9
Q ss_pred ccEEEeeeEEEccCCC--CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------
Q 000438 643 IAVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------ 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------ 708 (1510)
..|+++|++++|++.. ..++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 4589999999996422 13599999999999999999999999999999999999999999998866
Q ss_pred ------eEEEEcCCCc--CCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHH
Q 000438 709 ------TTAYVAQTSW--IQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 709 ------~iayv~Q~~~--i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1510)
.++|++|++. ++..|++||+.|+........++..+. ...-++.+... ....+..+.+||||||||++|
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~--~~~ll~~~~L~-~~~~~~~~~~LS~Gq~qrv~l 161 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK--VPELLKLVQLP-EDYVKRSPFELSGGQKRRVAL 161 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH--HHHHHHHcCCC-hhHhcCChhhCCHHHHHHHHH
Confidence 2699999984 566799999998642111011111111 11122222210 112356778999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|||++.+|+++||||||++||+.+++.+++.+.+... .|+|+|++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 162 aral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 240 (289)
T PRK13645 162 AGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEIFS 240 (289)
T ss_pred HHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999988866554443 3899999999999876 499999999999999999888754
No 448
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.8e-34 Score=322.72 Aligned_cols=195 Identities=23% Similarity=0.314 Sum_probs=168.3
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
-++++|++++|+. ..+++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNE--EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCC--ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 5999999999964 3599999999999999999999999999999999999999999999999998752 3466799
Q ss_pred EecCccccCcc-cHHHhcCCC----CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHcc
Q 000438 1347 IIPQEPVLFEG-TVRSNIDPI----GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLK 1421 (1510)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~----~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1421 (1510)
++||+|.+|.+ |+++|+... +...++.+.++++..++.+.. +..+ .+||+|||||++||||+++
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrv~laral~~ 154 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGYE-------DTLV----RQLSAGQKKRLALARLWLS 154 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCChhhc-------cCCh----hhCCHHHHHHHHHHHHHhc
Confidence 99999999887 999998521 222345567788888775443 3333 4699999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeC
Q 000438 1422 HSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDA 1477 (1510)
Q Consensus 1422 ~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~ 1477 (1510)
+|+||+|||||++||.++.+.+.+.|++.. +++|+|++||+++.+.+ ||++++++.
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 155 PAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 999999999999999999999999998753 46899999999999976 999999975
No 449
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.2e-34 Score=326.72 Aligned_cols=198 Identities=23% Similarity=0.380 Sum_probs=165.3
Q ss_pred EEEEEEEEEecC----C-CCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEc--C--eeCCCCCH
Q 000438 1268 VDLIDLQVRYRS----N-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIID--G--IDISLLGL 1338 (1510)
Q Consensus 1268 I~f~~vs~~Y~~----~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~ID--G--~dI~~i~l 1338 (1510)
|+++|++++|+. + .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+| | +++...+.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 689999999963 1 2469999999999999999999999999999999999999999999998 4 37766665
Q ss_pred HH---h-hcceEEecCccccCcc-cHHHhcCC-C--CCCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCC
Q 000438 1339 HD---L-RSRFGIIPQEPVLFEG-TVRSNIDP-I--GQYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWS 1406 (1510)
Q Consensus 1339 ~~---L-R~~i~iIpQdp~LF~g-TIR~NLdp-~--~~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS 1406 (1510)
.. + +++++|+||+|.+|.. |+++|+.. . .... ++++.++++..++.+..... ...+||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----------~~~~LS 151 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLWHL----------PPATFS 151 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhhC----------CcccCC
Confidence 54 3 4579999999988865 99999852 1 1122 35667788888876533221 245799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEE
Q 000438 1407 VGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVV 1475 (1510)
Q Consensus 1407 ~GQrQrl~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL 1475 (1510)
+|||||++|||||+++|++|+|||||++||+++.+.+.+.|++.. +++|+|+|+|+++.+.+ ||||+.+
T Consensus 152 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 152 GGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 999999999999999999999999999999999999999999864 47899999999999875 9999876
No 450
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1e-34 Score=395.04 Aligned_cols=215 Identities=22% Similarity=0.329 Sum_probs=190.3
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.|+++|++++|+++...+|+|+||++++||.+||+|+||||||||+++|.|++.|++|+|.++|.|+.+ .....|+++|
T Consensus 928 ~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~IG 1006 (2272)
T TIGR01257 928 GVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSLG 1006 (2272)
T ss_pred eEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcEE
Confidence 699999999997444569999999999999999999999999999999999999999999999999975 5677899999
Q ss_pred EecCccccCcc-cHHHhcCCCC---CCC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHH
Q 000438 1347 IIPQEPVLFEG-TVRSNIDPIG---QYS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRV 1418 (1510)
Q Consensus 1347 iIpQdp~LF~g-TIR~NLdp~~---~~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1418 (1510)
++||++.+|+. |++|||..+. ..+ ++++.+.|+.++|.+.....+ .+||||||||++||||
T Consensus 1007 ~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~~v~~lL~~vgL~~~~~~~~-----------~~LSGGqKQRLsLArA 1075 (2272)
T TIGR01257 1007 MCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEA-----------QDLSGGMQRKLSVAIA 1075 (2272)
T ss_pred EEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999975 9999996421 122 345778888888865543332 4689999999999999
Q ss_pred HccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcCC
Q 000438 1419 MLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLERP 1493 (1510)
Q Consensus 1419 LLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1493 (1510)
|+.+|+||+||||||+||+.+.+.+++.|++..+++|||++||+++.+.. ||||++|++|++++.|++++|.++-
T Consensus 1076 Li~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~ 1151 (2272)
T TIGR01257 1076 FVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCF 1151 (2272)
T ss_pred HHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhc
Confidence 99999999999999999999999999999998778999999999999976 9999999999999999999997643
No 451
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=336.49 Aligned_cols=208 Identities=24% Similarity=0.417 Sum_probs=167.4
Q ss_pred cEEEeeeEEEccCCC--CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------
Q 000438 644 AVEVRDGVFSWDDEN--GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------ 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------ 709 (1510)
.++++|++++|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 378999999996422 146999999999999999999999999999999999999999999998772
Q ss_pred -----EEEEcCCC--cCCCccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHH
Q 000438 710 -----TAYVAQTS--WIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 779 (1510)
Q Consensus 710 -----iayv~Q~~--~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 779 (1510)
++|++|++ .+++.|++||+.++.. .+.+..++. ..+-++.+... ......+..+||||||||++
T Consensus 82 ~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~-~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALVGIS-ESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCC-hhhhhCCcccCCHHHHHHHH
Confidence 68999997 5677899999987532 111111111 11112222211 01235677899999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 780 LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
||||++.+|+++||||||++||+...+.+.+.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+++++.+
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999887665544458999999999998864 99999999999999999988764
No 452
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=333.18 Aligned_cols=205 Identities=27% Similarity=0.387 Sum_probs=167.7
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------- 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 708 (1510)
+.++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 4689999999996 35799999999999999999999999999999999999999999998876
Q ss_pred ------------eEEEEcCCCcCCC-ccHHHHHhcCCC----CChhhHHHHHHHhchHHHHHhcccCCcccc-cCCCCcc
Q 000438 709 ------------TTAYVAQTSWIQN-GTIEENILFGLP----MNRAKYGEVVRVCCLEKDLEMMEYGDQTEI-GERGINL 770 (1510)
Q Consensus 709 ------------~iayv~Q~~~i~~-~Tv~enI~fg~~----~~~~~~~~v~~~~~l~~dl~~l~~gd~t~i-g~~g~~L 770 (1510)
.++|++|++.++. .|++||+.++.. .+....++ ...+-++.+... ... +....+|
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~--~~~~~~~~~~L 153 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARE-----RAVKYLAKVGID--ERAQGKYPVHL 153 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHH-----HHHHHHHHcCCC--hhhhhCCcccC
Confidence 2799999998775 699999987421 11111111 111223333221 122 4667899
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEe
Q 000438 771 SGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQS 849 (1510)
Q Consensus 771 SGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~ 849 (1510)
|||||||++||||++++|+++||||||++||+.+.+.+++.+.+...+|+|+|+|||+++++.. ||+|++|++|++++.
T Consensus 154 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 233 (257)
T PRK10619 154 SGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE 233 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999987655444458999999999999885 899999999999999
Q ss_pred cChHHHHh
Q 000438 850 GRYNALLN 857 (1510)
Q Consensus 850 g~~~~l~~ 857 (1510)
|+++++.+
T Consensus 234 ~~~~~~~~ 241 (257)
T PRK10619 234 GAPEQLFG 241 (257)
T ss_pred CCHHHhhh
Confidence 99988754
No 453
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.1e-34 Score=335.49 Aligned_cols=206 Identities=25% Similarity=0.322 Sum_probs=167.9
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------- 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------- 708 (1510)
..|+++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (269)
T PRK11831 6 NLVDMRGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTV 82 (269)
T ss_pred ceEEEeCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHH
Confidence 4689999999995 35799999999999999999999999999999999999999999999876
Q ss_pred --eEEEEcCCCcCCC-ccHHHHHhcCCC----CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHH
Q 000438 709 --TTAYVAQTSWIQN-GTIEENILFGLP----MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLA 781 (1510)
Q Consensus 709 --~iayv~Q~~~i~~-~Tv~enI~fg~~----~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 781 (1510)
.++|++|++.++. .|++||+.++.. .+....++ ....-++.+... .....+..+||||||||++||
T Consensus 83 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~--~~~~~~~~~LSgGq~qrv~la 155 (269)
T PRK11831 83 RKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHS-----TVMMKLEAVGLR--GAAKLMPSELSGGMARRAALA 155 (269)
T ss_pred hhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHH-----HHHHHHHHcCCh--hhhhCChhhCCHHHHHHHHHH
Confidence 2789999998775 599999987521 11111000 111223333222 223456789999999999999
Q ss_pred HHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000438 782 RAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 782 Ral~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
||++.+|+++||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++++.. ||++++|++|++++.|+++++.+.
T Consensus 156 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (269)
T PRK11831 156 RAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQAN 234 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999888765554443 8999999999998865 899999999999999999988753
No 454
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.7e-35 Score=321.10 Aligned_cols=209 Identities=29% Similarity=0.442 Sum_probs=171.1
Q ss_pred ccEEEeeeEEEccCCCC---------------------ccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCC
Q 000438 643 IAVEVRDGVFSWDDENG---------------------EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKIS 701 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~---------------------~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~ 701 (1510)
..|+++|+++-++++.. ..-++|+||+|+.||+.+|.|-+|||||||++++.++++|++
T Consensus 3 ~~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~ 82 (386)
T COG4175 3 VKIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTR 82 (386)
T ss_pred ceEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCC
Confidence 35788888877753211 124789999999999999999999999999999999999999
Q ss_pred cEEEECC-----------------eEEEEcCCC-cCCCccHHHHHhcCCCCC----hhhHHHHHHHhchHHHHHhcccCC
Q 000438 702 GKVKVCG-----------------TTAYVAQTS-WIQNGTIEENILFGLPMN----RAKYGEVVRVCCLEKDLEMMEYGD 759 (1510)
Q Consensus 702 G~i~~~g-----------------~iayv~Q~~-~i~~~Tv~enI~fg~~~~----~~~~~~v~~~~~l~~dl~~l~~gd 759 (1510)
|+|.++| ++++|+|+- .+++.||.||+.||.+.. +++.+++.+. ++.. |.
T Consensus 83 G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~------l~~V--gL 154 (386)
T COG4175 83 GEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEA------LELV--GL 154 (386)
T ss_pred ceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHH------HHHc--Cc
Confidence 9999998 379999995 457889999999998753 2333332222 2211 11
Q ss_pred cccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcc-ccCCE
Q 000438 760 QTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFL-HNVDL 837 (1510)
Q Consensus 760 ~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l-~~~D~ 837 (1510)
.-.-...+.+||||+||||.|||||..||||+|+|||||||||-.+.++-+++++...+ +||+|+||||+++. +..||
T Consensus 155 ~~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~r 234 (386)
T COG4175 155 EGYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDR 234 (386)
T ss_pred hhhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccce
Confidence 11223567899999999999999999999999999999999999999998888766544 79999999999985 56899
Q ss_pred EEEEeCCEEEEecChHHHHhcC
Q 000438 838 ILVMREGMIVQSGRYNALLNSG 859 (1510)
Q Consensus 838 i~~l~~G~i~~~g~~~~l~~~~ 859 (1510)
|..|+||+|++.|+++|++.+.
T Consensus 235 IaimkdG~ivQ~Gtp~eIl~~P 256 (386)
T COG4175 235 IAIMKDGEIVQVGTPEEILLNP 256 (386)
T ss_pred EEEecCCeEEEeCCHHHHHcCc
Confidence 9999999999999999998653
No 455
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.1e-34 Score=346.06 Aligned_cols=191 Identities=34% Similarity=0.451 Sum_probs=159.3
Q ss_pred ccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------------eEEEEcCCCc
Q 000438 660 EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------------------TTAYVAQTSW 718 (1510)
Q Consensus 660 ~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------------~iayv~Q~~~ 718 (1510)
..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .++|++|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 4689999999999999999999999999999999999999999999986 2799999998
Q ss_pred CCC-ccHHHHHhcCCCC---Chh-hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEE
Q 000438 719 IQN-GTIEENILFGLPM---NRA-KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLL 793 (1510)
Q Consensus 719 i~~-~Tv~enI~fg~~~---~~~-~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lL 793 (1510)
+++ .|++||+.++... +.+ +.+++ .+.++.+.. .........+|||||||||+|||||+.+|+|+||
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a------~e~le~vgL--~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLl 188 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRV------DEQLELVGL--AQWADKKPGELSGGMQQRVGLARAFAMDADILLM 188 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHH------HHHHHHcCC--chhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 875 7999999987532 111 11111 122233222 1223456778999999999999999999999999
Q ss_pred eCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000438 794 DDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 794 Dep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
|||||+||+.+++.+++.+.+...+ ++|+|+|||+++++. .+|+|++|++|++++.|+++++...
T Consensus 189 DEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 189 DEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 9999999999999998877665543 899999999999875 5999999999999999999998754
No 456
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-34 Score=323.59 Aligned_cols=199 Identities=26% Similarity=0.382 Sum_probs=159.6
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------eEEEEcC
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------TTAYVAQ 715 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------~iayv~Q 715 (1510)
++++|+++.|+ ++++++|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q 77 (210)
T cd03269 1 LEVENVTKRFG---RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPE 77 (210)
T ss_pred CEEEEEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEecc
Confidence 46889999995 35799999999999999999999999999999999999999999999987 3899999
Q ss_pred CCcCCC-ccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEe
Q 000438 716 TSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLD 794 (1510)
Q Consensus 716 ~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLD 794 (1510)
++.++. .|++||+.++.........+.. ....+-++.+. ..........+||||||||++||||++.+|+++|||
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~--~~~~~~l~~~~--l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~lllD 153 (210)
T cd03269 78 ERGLYPKMKVIDQLVYLAQLKGLKKEEAR--RRIDEWLERLE--LSEYANKRVEELSKGNQQKVQFIAAVIHDPELLILD 153 (210)
T ss_pred CCcCCcCCcHHHHHHHHHHHcCCChHHHH--HHHHHHHHHcC--ChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 987765 6999999875321100000000 01122233332 223345677899999999999999999999999999
Q ss_pred CccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEec
Q 000438 795 DVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1510)
Q Consensus 795 ep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1510)
|||++||+.+.+.+.+.+.+...+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 154 EP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 154 EPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 9999999999999987665544568999999999998865 9999999999998654
No 457
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=334.52 Aligned_cols=204 Identities=25% Similarity=0.371 Sum_probs=168.7
Q ss_pred cEEEeeeEEEccCCC---CccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------
Q 000438 644 AVEVRDGVFSWDDEN---GEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------ 708 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~---~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------ 708 (1510)
.++++|++++|+... ++++|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 589999999996422 35799999999999999999999999999999999999999999999886
Q ss_pred --eEEEEcCCCc--CCCccHHHHHhcCCCC---Chh----hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHH
Q 000438 709 --TTAYVAQTSW--IQNGTIEENILFGLPM---NRA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQR 777 (1510)
Q Consensus 709 --~iayv~Q~~~--i~~~Tv~enI~fg~~~---~~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 777 (1510)
.++|++|+|. ++..|+.||+.|+... +.. +.++.++.+++. ........+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~-----------~~~~~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMY-----------EYRRHAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCH-----------hHhhCCcccCCHHHHHH
Confidence 2689999984 5567999999987321 111 112222222222 23455678999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHH
Q 000438 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALL 856 (1510)
Q Consensus 778 v~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~ 856 (1510)
++||||++.+|+++||||||++||+.+++.+.+.+.+... .|+|+|++||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999865554434 489999999999998779999999999999999999886
Q ss_pred hc
Q 000438 857 NS 858 (1510)
Q Consensus 857 ~~ 858 (1510)
..
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 53
No 458
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.5e-34 Score=319.90 Aligned_cols=193 Identities=20% Similarity=0.280 Sum_probs=165.6
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|.. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. ....+|+++++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 689999999974 359999999999999999999999999999999999999999999999999875 34567889999
Q ss_pred ecCccccC-cccHHHhcCCC--CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCC
Q 000438 1348 IPQEPVLF-EGTVRSNIDPI--GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSR 1424 (1510)
Q Consensus 1348 IpQdp~LF-~gTIR~NLdp~--~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~k 1424 (1510)
+||++.++ ..|+++|+... ....+.++.++++..++.+.. |.++ .+||+|||||++||||++++|+
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~~rv~laral~~~p~ 147 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVGITELCRLFSLEHLI-------DYPC----GLLSSGQKRQVALLRLWMSKAK 147 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHHHHHHHHHcCCchhh-------hCCh----hhcCHHHHHHHHHHHHHhcCCC
Confidence 99999886 57999999632 112345677888888775433 2222 3699999999999999999999
Q ss_pred EEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhhcCEEEE
Q 000438 1425 LLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMDCDRVIV 1474 (1510)
Q Consensus 1425 ILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~~DrIlV 1474 (1510)
+|||||||++||..+.+.+.+.|++.. +++|+|++||+.+.+.+||.-.+
T Consensus 148 ~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 148 LWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 999999999999999999999999853 47899999999999999986543
No 459
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.1e-34 Score=337.29 Aligned_cols=201 Identities=27% Similarity=0.475 Sum_probs=169.5
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eEE
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TTA 711 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~ia 711 (1510)
.++++|+++.|+. ++.+|+||||+|++|+++|++||||||||||+++|+|.+.|++|+|.++| ++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheE
Confidence 5788999999962 35899999999999999999999999999999999999999999999998 389
Q ss_pred EEcCCCcC-CCccHHHHHhcCCCCC-------hhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHH
Q 000438 712 YVAQTSWI-QNGTIEENILFGLPMN-------RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARA 783 (1510)
Q Consensus 712 yv~Q~~~i-~~~Tv~enI~fg~~~~-------~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARa 783 (1510)
|+||+|-+ ...|++||+-|-.... .++.+++ ++.+...+.. ..+..+||||||||++||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~---------l~~~~L~~~~--~~~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEEL---------LELFGLEDKA--NKKVRTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHH---------HHHcCCchhh--CcchhhcCHHHHHHHHHHHH
Confidence 99999865 5679999998743211 1222223 3333333211 46678899999999999999
Q ss_pred HhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCC-cEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 784 VYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKG-KTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 784 l~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~-~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|..+|++++|||||++|||..+..+++.+.....+| +||+++||.++.+.. ||+|++|++|+++..|+.+++..
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~ 226 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKE 226 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHH
Confidence 999999999999999999999999987766666666 799999999999876 99999999999999999888654
No 460
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=362.93 Aligned_cols=207 Identities=24% Similarity=0.365 Sum_probs=177.1
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCH-HHhhcce
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGL-HDLRSRF 1345 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l-~~LR~~i 1345 (1510)
-++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. +.+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 359999999999999999999999999999999999999999999999999976543 3467889
Q ss_pred EEecCccccCcc-cHHHhcCCCC-----C-CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHH
Q 000438 1346 GIIPQEPVLFEG-TVRSNIDPIG-----Q-YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLC 1414 (1510)
Q Consensus 1346 ~iIpQdp~LF~g-TIR~NLdp~~-----~-~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1414 (1510)
+|+||+|.+|.+ |+++|+.... . .. ++++.++++.+++.+. ++.. ..+||||||||++
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~----~~~LSgGq~qrv~ 150 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDID-------PDTP----LKYLSIGQRQMVE 150 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCC-------cCCc----hhhCCHHHHHHHH
Confidence 999999998876 9999996321 1 12 2456777887776432 2222 2469999999999
Q ss_pred HHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecCh
Q 000438 1415 LGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKP 1486 (1510)
Q Consensus 1415 LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp 1486 (1510)
|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|++++.+++
T Consensus 151 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 151 IAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred HHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 9999999999999999999999999999999999864 47899999999999876 999999999999977654
No 461
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=333.07 Aligned_cols=206 Identities=25% Similarity=0.380 Sum_probs=167.4
Q ss_pred CCccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC-------
Q 000438 641 DNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG------- 708 (1510)
Q Consensus 641 ~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g------- 708 (1510)
++..|+++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 16 ~~~~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~ 92 (267)
T PRK14235 16 TEIKMRARDVSVFYG---EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPR 92 (267)
T ss_pred CCceEEEEeEEEEEC---CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccc
Confidence 345799999999996 25799999999999999999999999999999999999974 899999877
Q ss_pred --------eEEEEcCCCcCCCccHHHHHhcCCCC-----Chhh----HHHHHHHhchHHHHHhcccCCcccccCCCCccC
Q 000438 709 --------TTAYVAQTSWIQNGTIEENILFGLPM-----NRAK----YGEVVRVCCLEKDLEMMEYGDQTEIGERGINLS 771 (1510)
Q Consensus 709 --------~iayv~Q~~~i~~~Tv~enI~fg~~~-----~~~~----~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LS 771 (1510)
.++|++|++.++..|++||+.++... .... ..+.++..++.+.+ ....++.+.+||
T Consensus 93 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS 165 (267)
T PRK14235 93 LDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-------KDRLHEPGTGLS 165 (267)
T ss_pred cchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCC
Confidence 26999999988878999999886321 1111 11122222221111 123456788999
Q ss_pred hHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEec
Q 000438 772 GGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1510)
Q Consensus 772 GGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1510)
||||||++||||++.+|+++||||||++||+...+.+.+.+.. ..+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 166 gGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~-l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g 244 (267)
T PRK14235 166 GGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDE-LRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVG 244 (267)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHH-HhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeC
Confidence 9999999999999999999999999999999999988765543 3457899999999999865 8999999999999999
Q ss_pred ChHHHHh
Q 000438 851 RYNALLN 857 (1510)
Q Consensus 851 ~~~~l~~ 857 (1510)
+.+++..
T Consensus 245 ~~~~~~~ 251 (267)
T PRK14235 245 DTEKMFT 251 (267)
T ss_pred CHHHHHh
Confidence 9888764
No 462
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.5e-34 Score=367.63 Aligned_cols=199 Identities=25% Similarity=0.364 Sum_probs=170.5
Q ss_pred CcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCC--CcEEEEcCeeCCCCCHHHhhcceEEecCccccCcc-c
Q 000438 1282 PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS--GGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEG-T 1358 (1510)
Q Consensus 1282 ~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~--~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~g-T 1358 (1510)
..+|+|+|+++++||++||+|+||||||||+++|.|+.+|. +|+|.+||.++. ...+++++||||++.+|.. |
T Consensus 81 ~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~----~~~~~~i~yv~Q~~~l~~~lT 156 (659)
T PLN03211 81 RTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPT----KQILKRTGFVTQDDILYPHLT 156 (659)
T ss_pred CeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECc----hhhccceEEECcccccCCcCC
Confidence 45999999999999999999999999999999999999885 899999999874 2456789999999999964 9
Q ss_pred HHHhcCCC------CCCCHHH----HHHHHHHcCchHHHHhCcCCccccccCC-CCCCChhHHHHHHHHHHHccCCCEEE
Q 000438 1359 VRSNIDPI------GQYSDEE----IWKSLERCQLKDVVAAKPDKLDSLVADS-GDNWSVGQRQLLCLGRVMLKHSRLLF 1427 (1510)
Q Consensus 1359 IR~NLdp~------~~~sd~e----I~~aL~~~~L~~~i~~lp~gLdt~v~e~-G~nLS~GQrQrl~LARALLr~~kILi 1427 (1510)
+||||... ...+++| +.+.++..+|.+ ..||.+++. ...||||||||++|||||+++|+||+
T Consensus 157 V~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~-------~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLl 229 (659)
T PLN03211 157 VRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTK-------CENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLI 229 (659)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChh-------hcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEE
Confidence 99999631 1234433 445566666543 457777653 67899999999999999999999999
Q ss_pred EeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhh-hh-hcCEEEEEeCCEEEEecChhHHhc
Q 000438 1428 MDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPT-VM-DCDRVIVVDAGWAKEFGKPSRLLE 1491 (1510)
Q Consensus 1428 LDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~t-i~-~~DrIlVL~~G~ivE~gsp~~Ll~ 1491 (1510)
|||||++||+.+...+.+.|++.. +++|||+++|+++. +. .||+|++|++|++++.|+++++.+
T Consensus 230 LDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~ 296 (659)
T PLN03211 230 LDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMA 296 (659)
T ss_pred EeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHH
Confidence 999999999999999999999865 58999999999984 54 499999999999999999999874
No 463
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-35 Score=305.08 Aligned_cols=206 Identities=25% Similarity=0.345 Sum_probs=165.5
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eEEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TTAY 712 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~iay 712 (1510)
+++.+++++|++ ...+++|+||++++||+++|.|+|||||||+|+.|.+++.|++|.|.++| ++|.
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhcce
Confidence 678899999974 34589999999999999999999999999999999999999999999987 4677
Q ss_pred EcCCCc-CCCccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCE
Q 000438 713 VAQTSW-IQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDI 790 (1510)
Q Consensus 713 v~Q~~~-i~~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i 790 (1510)
++-+.- ....|+||||.|... ++-.+-+-..+...+.+.+++ +..+..+..++|-|+||||+|||||.+||++
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l-----~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i 154 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQL-----LEYLDRRVGEFSTGMKQKVAIARALVHDPSI 154 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhCh-----HHHHHHHHhhhchhhHHHHHHHHHHhcCCCe
Confidence 775544 457899999986432 211111111111122222222 2234567889999999999999999999999
Q ss_pred EEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 791 YLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 791 ~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|+||||+|+||..+.+.+.+.+.+....|+++|+.||.+++++. ||+|+++++|+++..|+.+++..
T Consensus 155 ~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 155 LVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred EEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHH
Confidence 99999999999999888876665555669999999999999985 99999999999999999988764
No 464
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.8e-34 Score=363.05 Aligned_cols=211 Identities=25% Similarity=0.363 Sum_probs=178.8
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCC--CCcEEEEcCeeCCCCCHHH-hhcc
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP--SGGRIIIDGIDISLLGLHD-LRSR 1344 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep--~~G~I~IDG~dI~~i~l~~-LR~~ 1344 (1510)
++++|++++|+. ..+|+|+||++++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+... .|++
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999964 3599999999999999999999999999999999999987 7999999999998877655 4678
Q ss_pred eEEecCccccCcc-cHHHhcCCCCC-------CC----HHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHH
Q 000438 1345 FGIIPQEPVLFEG-TVRSNIDPIGQ-------YS----DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQL 1412 (1510)
Q Consensus 1345 i~iIpQdp~LF~g-TIR~NLdp~~~-------~s----d~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQr 1412 (1510)
++|+||+|.+|.. |+++|+..... .. ++++.++++..++.+.. .+.++ ..||||||||
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~----~~LSgG~~qr 149 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN------VTRPV----GDYGGGQQQL 149 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc------ccCch----hhCCHHHHHH
Confidence 9999999988865 99999963211 11 23466677777764321 12223 3699999999
Q ss_pred HHHHHHHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1413 LCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1413 l~LARALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
++|||||+++|+||||||||++||+++.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|++++..
T Consensus 150 v~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (500)
T TIGR02633 150 VEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS 229 (500)
T ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC
Confidence 999999999999999999999999999999999998753 46899999999999987 9999999999999999887653
No 465
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=330.40 Aligned_cols=204 Identities=23% Similarity=0.363 Sum_probs=165.8
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------E
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------T 710 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------i 710 (1510)
.++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (255)
T PRK11231 2 TLRTENLTVGYG---TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRL 78 (255)
T ss_pred EEEEEeEEEEEC---CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhhe
Confidence 378999999995 257999999999999999999999999999999999999999999998872 7
Q ss_pred EEEcCCCcCCC-ccHHHHHhcCCC-C----C--hhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHH
Q 000438 711 AYVAQTSWIQN-GTIEENILFGLP-M----N--RAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLAR 782 (1510)
Q Consensus 711 ayv~Q~~~i~~-~Tv~enI~fg~~-~----~--~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 782 (1510)
+|++|++.++. .|+.||+.++.. . . .....+. ...-++.+.. .......+..||||||||++|||
T Consensus 79 ~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l--~~~~~~~~~~LS~G~~qrv~lar 151 (255)
T PRK11231 79 ALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNAR-----VNQAMEQTRI--NHLADRRLTDLSGGQRQRAFLAM 151 (255)
T ss_pred EEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHH-----HHHHHHHcCC--HHHHcCCcccCCHHHHHHHHHHH
Confidence 99999987765 499999998631 1 0 1111110 1111222211 12234667899999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 783 al~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|++.+|+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++.+.. +|++++|++|+++..|+++++.+
T Consensus 152 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 152 VLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 9999999999999999999999998887665544468999999999999865 89999999999999999888754
No 466
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=330.67 Aligned_cols=210 Identities=19% Similarity=0.316 Sum_probs=168.8
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1510)
..++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (255)
T PRK11300 4 PLLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARM 80 (255)
T ss_pred ceEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhc
Confidence 3689999999995 357999999999999999999999999999999999999999999999872
Q ss_pred -EEEEcCCCcCCC-ccHHHHHhcCCCC-----------ChhhHHH--HHHHhchHHHHHhcccCCcccccCCCCccChHH
Q 000438 710 -TAYVAQTSWIQN-GTIEENILFGLPM-----------NRAKYGE--VVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQ 774 (1510)
Q Consensus 710 -iayv~Q~~~i~~-~Tv~enI~fg~~~-----------~~~~~~~--v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 774 (1510)
++|++|++.++. .|++||+.++... +...+.+ ..........++.+ |.....+.++.+|||||
T Consensus 81 ~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~ 158 (255)
T PRK11300 81 GVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQ 158 (255)
T ss_pred CeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHH
Confidence 688999998775 5999999986310 0000000 00000112223333 22234567888999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcccc-CCEEEEEeCCEEEEecCh
Q 000438 775 KQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRY 852 (1510)
Q Consensus 775 kqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~ 852 (1510)
|||++||||++.+|+++||||||++||+...+.+.+.+.+...+ |+|+|++||+++++.. ||++++|++|++++.|+.
T Consensus 159 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~ 238 (255)
T PRK11300 159 QRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTP 238 (255)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCH
Confidence 99999999999999999999999999999999998766554444 8999999999999865 999999999999999998
Q ss_pred HHHHh
Q 000438 853 NALLN 857 (1510)
Q Consensus 853 ~~l~~ 857 (1510)
+++.+
T Consensus 239 ~~~~~ 243 (255)
T PRK11300 239 EEIRN 243 (255)
T ss_pred HHHhh
Confidence 87754
No 467
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.6e-34 Score=319.70 Aligned_cols=194 Identities=23% Similarity=0.327 Sum_probs=168.1
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
-++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. . ..|++++
T Consensus 2 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~-~~~~~~~ 76 (207)
T PRK13539 2 MLEGEDLACVRGG--RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--P-DVAEACH 76 (207)
T ss_pred EEEEEeEEEEECC--eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--h-hhHhhcE
Confidence 3789999999974 358999999999999999999999999999999999999999999999998753 2 2788999
Q ss_pred EecCccccC-cccHHHhcCCC---CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccC
Q 000438 1347 IIPQEPVLF-EGTVRSNIDPI---GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKH 1422 (1510)
Q Consensus 1347 iIpQdp~LF-~gTIR~NLdp~---~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~ 1422 (1510)
++||++.++ ..|+++|+... ....++++.++++..++.+.....+ .+||+|||||++||||++++
T Consensus 77 ~~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~la~al~~~ 145 (207)
T PRK13539 77 YLGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLAPLAHLPF-----------GYLSAGQKRRVALARLLVSN 145 (207)
T ss_pred EecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHcCCh-----------hhcCHHHHHHHHHHHHHhcC
Confidence 999988765 67999998532 2234667899999999976433222 36999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhhcCEEEEEeC
Q 000438 1423 SRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMDCDRVIVVDA 1477 (1510)
Q Consensus 1423 ~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~~DrIlVL~~ 1477 (1510)
|++|+|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. |+++.++.
T Consensus 146 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 146 RPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 99999999999999999999999998753 57899999999999988 99988754
No 468
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-34 Score=329.08 Aligned_cols=207 Identities=28% Similarity=0.398 Sum_probs=166.2
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------E
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------T 710 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------i 710 (1510)
.++++|++++|++ +++|+|+||++++|++++|+|+||||||||+++|+|+.+|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 4789999999963 46999999999999999999999999999999999999999999999873 6
Q ss_pred EEEcCCCcC-CCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHh----
Q 000438 711 AYVAQTSWI-QNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY---- 785 (1510)
Q Consensus 711 ayv~Q~~~i-~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~---- 785 (1510)
+|++|++.+ ++.|++||+.++........++..+ ....-++.+.. .........+||||||||++||||++
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~--~~~~~l~~~~l--~~~~~~~~~~LSgGe~qrv~la~al~~~~~ 154 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDA--LVAAALAQVDL--AHLAGRDYPQLSGGEQQRVQLARVLAQLWE 154 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHH--HHHHHHHHcCC--HhHhcCCcccCCHHHHHHHHHHHHHhcccc
Confidence 899999876 6789999998864211000000000 01112222221 12234567899999999999999999
Q ss_pred --cCCCEEEEeCccCCCChhHHHHHHHHHHhhh-cCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000438 786 --QDCDIYLLDDVFSAVDAHTGSDIFKECVRGA-LKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 786 --~~~~i~lLDep~salD~~~~~~i~~~~~~~~-~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
.+|+++||||||++||+.+.+++.+.+.+.. .+|+|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 155 ~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 155 PDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred cCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 5999999999999999999999886655544 45899999999999986 599999999999999999888764
No 469
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=331.44 Aligned_cols=210 Identities=27% Similarity=0.379 Sum_probs=166.0
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcC---ccc--CCcEEEECC---------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGE---MHK--ISGKVKVCG--------- 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~---~~~--~~G~i~~~g--------- 708 (1510)
..++++|+++.|+. +++|+|+||++++||+++|+|+||||||||+++|+|. .++ ++|+|.++|
T Consensus 2 ~~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14245 2 VKIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQ 78 (250)
T ss_pred cEEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEeccccccc
Confidence 36889999999953 5699999999999999999999999999999999996 454 589998876
Q ss_pred ------eEEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCC--cccccCCCCccChHHHHHHHH
Q 000438 709 ------TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGD--QTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd--~t~ig~~g~~LSGGQkqRv~L 780 (1510)
.++|++|++.+++.|++||+.++.........+..+. ...+-++.+...+ .+..++.+.+||||||||++|
T Consensus 79 ~~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~l 157 (250)
T PRK14245 79 VDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQ-RVEETLKGAALWDEVKDKLKESAFALSGGQQQRLCI 157 (250)
T ss_pred HHHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHH-HHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHH
Confidence 2799999998888899999987632110000000000 0111122222111 123467788999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|||++.+|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++++.. ||++++|++|++++.|+++++.+
T Consensus 158 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~ 234 (250)
T PRK14245 158 ARAMAVSPSVLLMDEPASALDPISTAKVEELIHEL-KKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFT 234 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHH-hcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999988665544 468999999999999854 99999999999999999998865
No 470
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=347.40 Aligned_cols=191 Identities=30% Similarity=0.421 Sum_probs=157.7
Q ss_pred cccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-----------------eEEEEcCCCcCC-Cc
Q 000438 661 ECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-----------------TTAYVAQTSWIQ-NG 722 (1510)
Q Consensus 661 ~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-----------------~iayv~Q~~~i~-~~ 722 (1510)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|++|++.++ +.
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 479999999999999999999999999999999999999999999876 379999999876 47
Q ss_pred cHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCC
Q 000438 723 TIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSA 799 (1510)
Q Consensus 723 Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~sa 799 (1510)
|++||+.++... +.+..++ ...+-++.+.. .........+|||||||||+||||++.+|+++||||||++
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~gL--~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~ 194 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERRE-----KALDALRQVGL--ENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSA 194 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCC--ChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCcc
Confidence 999999986432 1111111 11122333322 2234567789999999999999999999999999999999
Q ss_pred CChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000438 800 VDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 800 lD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
||+.+++.+.+.+.+... .|+|+|+|||+++++. .||+|++|++|++++.|+++++.+.
T Consensus 195 LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 195 LDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999877665543 4899999999999875 4999999999999999999998764
No 471
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3.1e-34 Score=328.85 Aligned_cols=207 Identities=29% Similarity=0.410 Sum_probs=166.5
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------- 708 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------- 708 (1510)
.++++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|..+|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 4789999999952 4699999999999999999999999999999999999999999998765
Q ss_pred ------eEEEEcCCCcCC-CccHHHHHhcCCC-CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHH
Q 000438 709 ------TTAYVAQTSWIQ-NGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 709 ------~iayv~Q~~~i~-~~Tv~enI~fg~~-~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1510)
.++|++|++.++ ..|++||+.++.. .......+..+ ...+.++.+.. .......+.+||||||||++|
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~--~~~~~l~~~gl--~~~~~~~~~~LS~Gq~qrv~l 155 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA--RARELLAKVGL--AGKETSYPRRLSGGQQQRVAI 155 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH--HHHHHHHHcCC--cchhhCChhhCChHHHHHHHH
Confidence 379999998776 4799999987521 10000011001 11122333322 222456788999999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|||++.+|+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++++.. ||++++|++|++++.|+.+++.+
T Consensus 156 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 233 (250)
T PRK11264 156 ARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFA 233 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999987655444458999999999999865 99999999999999999988764
No 472
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=331.04 Aligned_cols=206 Identities=27% Similarity=0.404 Sum_probs=166.0
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc--c---CCcEEEECCe--------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH--K---ISGKVKVCGT-------- 709 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~--~---~~G~i~~~g~-------- 709 (1510)
..|+++|+++.|+. +++|+|+||+|++||+++|+|+||||||||+++|+|.++ | ++|+|.++|.
T Consensus 11 ~~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~ 87 (259)
T PRK14274 11 EVYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVD 87 (259)
T ss_pred ceEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccC
Confidence 46899999999962 479999999999999999999999999999999999987 3 6899988762
Q ss_pred -------EEEEcCCCcCCCccHHHHHhcCCCCC----hhhHHHHHHHhchHHHHHhcccCC--cccccCCCCccChHHHH
Q 000438 710 -------TAYVAQTSWIQNGTIEENILFGLPMN----RAKYGEVVRVCCLEKDLEMMEYGD--QTEIGERGINLSGGQKQ 776 (1510)
Q Consensus 710 -------iayv~Q~~~i~~~Tv~enI~fg~~~~----~~~~~~v~~~~~l~~dl~~l~~gd--~t~ig~~g~~LSGGQkq 776 (1510)
++|++|++.+++.|++||+.++.... ++...+.+ ..-++.+...+ .......+.+|||||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 88 LVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIV-----EKSLKDVALWDEVKDRLHTQALSLSGGQQQ 162 (259)
T ss_pred HHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHH-----HHHHHHcCCchhhhhhhhCCcccCCHHHHH
Confidence 78999999888889999998864221 11111111 11122221110 12346678899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHH
Q 000438 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNAL 855 (1510)
Q Consensus 777 Rv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 855 (1510)
|++||||++.+|+++||||||++||+++...+.+.+. ...+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~-~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELIL-KLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHH-HHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999998876544 44457999999999999864 999999999999999999987
Q ss_pred Hh
Q 000438 856 LN 857 (1510)
Q Consensus 856 ~~ 857 (1510)
.+
T Consensus 242 ~~ 243 (259)
T PRK14274 242 FS 243 (259)
T ss_pred hh
Confidence 64
No 473
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.3e-34 Score=327.63 Aligned_cols=202 Identities=31% Similarity=0.464 Sum_probs=164.0
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------eE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------TT 710 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~i 710 (1510)
++++|+++.|++ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 468999999963 4799999999999999999999999999999999999999999999876 27
Q ss_pred EEEcCCCcCCC-ccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000438 711 AYVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1510)
Q Consensus 711 ayv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~ 789 (1510)
+|++|++.++. .|++||+.++.........+.. .+-++.+. +......++..+||||||||++||||++.+|+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ 151 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIP-----DEIYELFP-VLKEMLGRRGGDLSGGQQQQLAIARALVTRPK 151 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHH-----HHHHHHHH-hHHHHhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999998765 5999999876432111111111 11111111 11122356778999999999999999999999
Q ss_pred EEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHH
Q 000438 790 IYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNAL 855 (1510)
Q Consensus 790 i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 855 (1510)
++||||||++||+.+.+.+.+.+.+... .++|+|++||+++++.. ||+++++++|++++.|+.+++
T Consensus 152 illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 152 LLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 9999999999999999999876655444 38999999999999875 999999999999999998876
No 474
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=2.3e-34 Score=308.49 Aligned_cols=161 Identities=28% Similarity=0.440 Sum_probs=146.0
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--eEEEEcCCCcCCCc
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--TTAYVAQTSWIQNG 722 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~iayv~Q~~~i~~~ 722 (1510)
|+++|++++|+. ++++|+|+||++++||+++|+|+||||||||+++|+|+.+|++|+|.++| .++|++|++.+++.
T Consensus 1 i~~~~~~~~~~~--~~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~~~~~ 78 (166)
T cd03223 1 IELENLSLATPD--GRVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYLPLG 78 (166)
T ss_pred CEEEEEEEEcCC--CCeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCccccc
Confidence 468899999953 24699999999999999999999999999999999999999999999987 79999999998889
Q ss_pred cHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCCh
Q 000438 723 TIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDA 802 (1510)
Q Consensus 723 Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~ 802 (1510)
|++||+.++ ++.+||||||||++||||++.+|+++||||||++||+
T Consensus 79 tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~ 124 (166)
T cd03223 79 TLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDE 124 (166)
T ss_pred cHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCH
Confidence 999999864 2468999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCC
Q 000438 803 HTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREG 844 (1510)
Q Consensus 803 ~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~~D~i~~l~~G 844 (1510)
++.+.+.+.+.+ . ++|+|++||+.+....||++++|++|
T Consensus 125 ~~~~~l~~~l~~-~--~~tiiivsh~~~~~~~~d~i~~l~~~ 163 (166)
T cd03223 125 ESEDRLYQLLKE-L--GITVISVGHRPSLWKFHDRVLDLDGE 163 (166)
T ss_pred HHHHHHHHHHHH-h--CCEEEEEeCChhHHhhCCEEEEEcCC
Confidence 999988765543 2 68999999999887779999999875
No 475
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=331.62 Aligned_cols=208 Identities=23% Similarity=0.352 Sum_probs=168.6
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------- 709 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------- 709 (1510)
..++++|+++.|++. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (269)
T PRK13648 6 SIIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKH 84 (269)
T ss_pred ceEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhh
Confidence 368999999999642 246999999999999999999999999999999999999999999999882
Q ss_pred EEEEcCCCc--CCCccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHH
Q 000438 710 TAYVAQTSW--IQNGTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1510)
Q Consensus 710 iayv~Q~~~--i~~~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal 784 (1510)
++|++|+|. ++..|+++|+.++... ..+...+.+ ..-++.+... .....++.+||||||||++||||+
T Consensus 85 i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~--~~~~~~~~~LS~G~~qrl~laral 157 (269)
T PRK13648 85 IGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRV-----SEALKQVDML--ERADYEPNALSGGQKQRVAIAGVL 157 (269)
T ss_pred eeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHH-----HHHHHHcCCc--hhhhCCcccCCHHHHHHHHHHHHH
Confidence 699999985 5567999999887432 111111111 1112222211 123456789999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000438 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 785 ~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
+.+|+++||||||++||+.+.+.+++.+.+... .|+|+|++||+++++..||+|++|++|++++.|+++++.+.
T Consensus 158 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 158 ALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999876554433 38999999999999877999999999999999999887653
No 476
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3e-34 Score=324.37 Aligned_cols=200 Identities=28% Similarity=0.356 Sum_probs=159.8
Q ss_pred ccEEEeeeEEEccCCCC-ccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000438 643 IAVEVRDGVFSWDDENG-EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1510)
..++++|++++|++... .++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 84 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAK 84 (228)
T ss_pred ceEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHH
Confidence 36899999999964222 3599999999999999999999999999999999999999999998876
Q ss_pred ----eEEEEcCCCcCCC-ccHHHHHhcCCCC---ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHH
Q 000438 709 ----TTAYVAQTSWIQN-GTIEENILFGLPM---NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQL 780 (1510)
Q Consensus 709 ----~iayv~Q~~~i~~-~Tv~enI~fg~~~---~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 780 (1510)
.++|++|++.++. .|++||+.++..+ +....++ ...+-++.+... ........+||||||||++|
T Consensus 85 ~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~--~~~~~~~~~LS~Ge~qrl~l 157 (228)
T PRK10584 85 LRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRN-----GAKALLEQLGLG--KRLDHLPAQLSGGEQQRVAL 157 (228)
T ss_pred HHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCH--hHhhCChhhCCHHHHHHHHH
Confidence 3799999987765 6999999875321 1111110 111222222221 12345667899999999999
Q ss_pred HHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccccCCEEEEEeCCEEEEe
Q 000438 781 ARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHNVDLILVMREGMIVQS 849 (1510)
Q Consensus 781 ARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~~D~i~~l~~G~i~~~ 849 (1510)
|||++.+|+++||||||++||+...+.+++.+.+...+ |+|+|++||+++++..||++++|++|++++.
T Consensus 158 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 158 ARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999999999988766554443 8999999999998877999999999999753
No 477
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=331.34 Aligned_cols=208 Identities=29% Similarity=0.421 Sum_probs=167.2
Q ss_pred CccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC--------
Q 000438 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG-------- 708 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g-------- 708 (1510)
+..++++|++++|++ +++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 11 ~~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~ 87 (269)
T PRK14259 11 NIIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRV 87 (269)
T ss_pred CceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccC
Confidence 357999999999963 469999999999999999999999999999999999987 6899999876
Q ss_pred -------eEEEEcCCCcCCCccHHHHHhcCCCCCh--hhHHHHHHHhchHHHHHhccc--CCcccccCCCCccChHHHHH
Q 000438 709 -------TTAYVAQTSWIQNGTIEENILFGLPMNR--AKYGEVVRVCCLEKDLEMMEY--GDQTEIGERGINLSGGQKQR 777 (1510)
Q Consensus 709 -------~iayv~Q~~~i~~~Tv~enI~fg~~~~~--~~~~~v~~~~~l~~dl~~l~~--gd~t~ig~~g~~LSGGQkqR 777 (1510)
.++|++|++.++..|++||+.++..... ...++..+ +.++.+.. +.......+..+||||||||
T Consensus 88 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 162 (269)
T PRK14259 88 DPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVE-----RSLRKAAVWDECKDKLNESGYSLSGGQQQR 162 (269)
T ss_pred CHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHH-----HHHHHhCCcchhhhhhCCCcccCCHHHHHH
Confidence 2799999998877899999998753211 11111111 11111111 11223456778999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeC-----------CE
Q 000438 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMRE-----------GM 845 (1510)
Q Consensus 778 v~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~-----------G~ 845 (1510)
++||||++.+|+++||||||++||+.+.+.+.+.+.+ ..+++|+|++||+++++.. ||++++|++ |+
T Consensus 163 l~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 163 LCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHE-LKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHH-HhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 9999999999999999999999999999998865544 3457999999999998864 999999996 67
Q ss_pred EEEecChHHHHhc
Q 000438 846 IVQSGRYNALLNS 858 (1510)
Q Consensus 846 i~~~g~~~~l~~~ 858 (1510)
+++.|+.+++.+.
T Consensus 242 ~~~~~~~~~~~~~ 254 (269)
T PRK14259 242 LVEFNETKKIFNS 254 (269)
T ss_pred EEEeCCHHHHHhC
Confidence 8999999888653
No 478
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-34 Score=325.44 Aligned_cols=205 Identities=23% Similarity=0.349 Sum_probs=166.9
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1510)
.++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|..+|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYG---KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeC---CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 588999999995 257999999999999999999999999999999999999999999998872
Q ss_pred EEEEcCCCcCCC-ccHHHHHhcCCCC-ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000438 710 TAYVAQTSWIQN-GTIEENILFGLPM-NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1510)
Q Consensus 710 iayv~Q~~~i~~-~Tv~enI~fg~~~-~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~ 787 (1510)
++|++|++.++. .|++||+.++... +.....+.+ .+-++.++..+. .......+||||||||++||||++.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~~l~~-~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFPRLHE-RRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHHHHHH-HHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 789999987765 6999999886432 111111111 111222211111 12346778999999999999999999
Q ss_pred CCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000438 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 788 ~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++++. .||++++|++|++++.|+++++.+
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 9999999999999999999998766554456899999999999875 599999999999999999988864
No 479
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=327.70 Aligned_cols=207 Identities=18% Similarity=0.336 Sum_probs=167.0
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--------------e
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------------T 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------------~ 709 (1510)
.++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+.+|++|+|.++| .
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYK---GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 478999999995 25799999999999999999999999999999999999999999999887 2
Q ss_pred EEEEcCCCcCCC-ccHHHHHhcCCCCChh-hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000438 710 TAYVAQTSWIQN-GTIEENILFGLPMNRA-KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1510)
Q Consensus 710 iayv~Q~~~i~~-~Tv~enI~fg~~~~~~-~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~ 787 (1510)
++|++|++.++. .|++||+.++...... ..++.. ....+.++.+.. ......+..+||||||||++||||++.+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~--~~~~~~l~~~~l--~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE--DRANELMEEFHI--EHLRDSMGQSLSGGERRRVEIARALAAN 155 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHH--HHHHHHHHHcCC--HHHhhcchhhCCHHHHHHHHHHHHHhcC
Confidence 799999987765 6999999876422110 000000 011222333322 2234567789999999999999999999
Q ss_pred CCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 788 ~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 156 PKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999988876554444468999999999988764 89999999999999999988754
No 480
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=361.38 Aligned_cols=208 Identities=19% Similarity=0.327 Sum_probs=175.4
Q ss_pred EEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHH-HhhcceEEe
Q 000438 1270 LIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLH-DLRSRFGII 1348 (1510)
Q Consensus 1270 f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~-~LR~~i~iI 1348 (1510)
++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|++++++
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999964 3599999999999999999999999999999999999999999999999999766543 457889999
Q ss_pred cCccccCc-ccHHHhcCCC----CC--CCH----HHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1349 PQEPVLFE-GTVRSNIDPI----GQ--YSD----EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1349 pQdp~LF~-gTIR~NLdp~----~~--~sd----~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
||+|.+|. .|+++|+... .. .+. +++.++++..++.+. ++. ...+||||||||++|||
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~----~~~~LSgGq~qrv~lA~ 147 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDID-------PRA----KVATLSVSQMQMIEIAK 147 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCC-------ccC----chhhCCHHHHHHHHHHH
Confidence 99998775 4999999631 11 122 234556666655422 222 23579999999999999
Q ss_pred HHccCCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHh
Q 000438 1418 VMLKHSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1418 ALLr~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1490 (1510)
||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||||++|++|++++.|+++++.
T Consensus 148 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 148 AFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred HHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 9999999999999999999999999999998864 47899999999999876 9999999999999999988864
No 481
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-34 Score=331.47 Aligned_cols=211 Identities=24% Similarity=0.321 Sum_probs=166.9
Q ss_pred CccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC--------
Q 000438 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG-------- 708 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g-------- 708 (1510)
+..++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 19 ~~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~ 95 (268)
T PRK14248 19 EHILEVKDLSIYYG---EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNI 95 (268)
T ss_pred CceEEEEEEEEEeC---CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccc
Confidence 34699999999996 2579999999999999999999999999999999999864 6899998875
Q ss_pred -------eEEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhccc--CCcccccCCCCccChHHHHHHH
Q 000438 709 -------TTAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEY--GDQTEIGERGINLSGGQKQRIQ 779 (1510)
Q Consensus 709 -------~iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~--gd~t~ig~~g~~LSGGQkqRv~ 779 (1510)
.++|++|++.++..|++||+.++............+. .....++.+.. +.....+.++.+||||||||++
T Consensus 96 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-~~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl~ 174 (268)
T PRK14248 96 NVVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDE-IVEESLTKAALWDEVKDRLHSSALSLSGGQQQRLC 174 (268)
T ss_pred cHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHH-HHHHHHHHcCCCcchHHHHhcCcccCCHHHHHHHH
Confidence 3799999999888899999987632211111111110 01111222211 1112345678899999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000438 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 780 LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
||||++++|+++||||||++||+.+.+.+.+.+.+ ..+++|+|++||+++++. .||++++|++|++++.|+++++.+
T Consensus 175 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~-~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 252 (268)
T PRK14248 175 IARTLAMKPAVLLLDEPASALDPISNAKIEELITE-LKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIFT 252 (268)
T ss_pred HHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHH-HhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999998765544 345789999999999876 499999999999999999888764
No 482
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=331.13 Aligned_cols=205 Identities=25% Similarity=0.349 Sum_probs=166.1
Q ss_pred CccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------
Q 000438 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------- 708 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------- 708 (1510)
+..++++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 9 ~~~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 85 (265)
T PRK10575 9 DTTFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFAR 85 (265)
T ss_pred CceEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhh
Confidence 357999999999952 4799999999999999999999999999999999999999999999987
Q ss_pred eEEEEcCCCcC-CCccHHHHHhcCCC-C-------ChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHH
Q 000438 709 TTAYVAQTSWI-QNGTIEENILFGLP-M-------NRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQ 779 (1510)
Q Consensus 709 ~iayv~Q~~~i-~~~Tv~enI~fg~~-~-------~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 779 (1510)
.++|++|++-+ +..|+.||+.++.. . .....++ ...-++.+.. ...+.....+||||||||++
T Consensus 86 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~l--~~~~~~~~~~LSgG~~qrv~ 157 (265)
T PRK10575 86 KVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREK------VEEAISLVGL--KPLAHRLVDSLSGGERQRAW 157 (265)
T ss_pred heEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHH------HHHHHHHcCC--HHHhcCCcccCCHHHHHHHH
Confidence 27999999754 45699999998632 1 0110011 1111222211 11234566789999999999
Q ss_pred HHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000438 780 LARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 780 LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
||||++.+|+++||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++++. .||+|++|++|++++.|+.+++.+
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 999999999999999999999999999888765554443 899999999999986 599999999999999999888754
No 483
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=330.79 Aligned_cols=206 Identities=25% Similarity=0.356 Sum_probs=166.6
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC---------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG--------- 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g--------- 708 (1510)
..++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|..+| ++|+|.++|
T Consensus 11 ~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 87 (258)
T PRK14268 11 PQIKVENLNLWYG---EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD 87 (258)
T ss_pred eeEEEeeeEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch
Confidence 4699999999995 35699999999999999999999999999999999999875 799998866
Q ss_pred ------eEEEEcCCCcCCCccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccC--CcccccCCCCccChHHHHH
Q 000438 709 ------TTAYVAQTSWIQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYG--DQTEIGERGINLSGGQKQR 777 (1510)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~g--d~t~ig~~g~~LSGGQkqR 777 (1510)
.++|++|++.++..|++||+.++.. .+.+..++. ..+-++.+... ..........+||||||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qr 162 (258)
T PRK14268 88 VVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGV-----VENALRSAALWDETSDRLKSPALSLSGGQQQR 162 (258)
T ss_pred HHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCCcchhhhhcCChhhCCHHHHHH
Confidence 2789999998888999999988632 111111110 11112222111 0123456778999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHH
Q 000438 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALL 856 (1510)
Q Consensus 778 v~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~ 856 (1510)
++||||++.+|+++||||||++||+.+...+.+.+.+. .+++|+|++||+++++.. ||+|++|++|++++.|+++++.
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l-~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNL-KKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHH-hhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999987655443 458999999999999865 9999999999999999998876
Q ss_pred h
Q 000438 857 N 857 (1510)
Q Consensus 857 ~ 857 (1510)
+
T Consensus 242 ~ 242 (258)
T PRK14268 242 H 242 (258)
T ss_pred c
Confidence 4
No 484
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=331.51 Aligned_cols=205 Identities=26% Similarity=0.384 Sum_probs=168.6
Q ss_pred CccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc-----cCCcEEEECC--------
Q 000438 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH-----KISGKVKVCG-------- 708 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~-----~~~G~i~~~g-------- 708 (1510)
...|+++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 18 ~~~l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 18 EIALSTKDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred CeEEEEeeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 35799999999995 3579999999999999999999999999999999999986 5899998876
Q ss_pred -------eEEEEcCCCcCCCccHHHHHhcCCCC----Chh----hHHHHHHHhchHHHHHhcccCCcccccCCCCccChH
Q 000438 709 -------TTAYVAQTSWIQNGTIEENILFGLPM----NRA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGG 773 (1510)
Q Consensus 709 -------~iayv~Q~~~i~~~Tv~enI~fg~~~----~~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGG 773 (1510)
.++|++|++.++..|++||+.++... +++ +..+.++..++..++ ....++.+.+||||
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~G 167 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-------KDDLHKSALTLSGG 167 (267)
T ss_pred ChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-------hhhhcCCcccCCHH
Confidence 27999999998888999999886321 111 111122222221111 12356778899999
Q ss_pred HHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecCh
Q 000438 774 QKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRY 852 (1510)
Q Consensus 774 QkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~ 852 (1510)
||||++||||++.+|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++++. .||++++|++|++++.|++
T Consensus 168 ~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~ 246 (267)
T PRK14237 168 QQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFEL-KKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKT 246 (267)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-hcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999999888655444 45799999999999885 4999999999999999999
Q ss_pred HHHHh
Q 000438 853 NALLN 857 (1510)
Q Consensus 853 ~~l~~ 857 (1510)
+++.+
T Consensus 247 ~~~~~ 251 (267)
T PRK14237 247 RNIFT 251 (267)
T ss_pred HHHhc
Confidence 88764
No 485
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-34 Score=322.30 Aligned_cols=190 Identities=20% Similarity=0.319 Sum_probs=155.6
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC------------eEEE
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG------------TTAY 712 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g------------~iay 712 (1510)
|+++|+++.|+. +++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEE
Confidence 468999999953 47999999999999 9999999999999999999999999999999987 3799
Q ss_pred EcCCCcCCC-ccHHHHHhcCCC---CChh----hHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHH
Q 000438 713 VAQTSWIQN-GTIEENILFGLP---MNRA----KYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1510)
Q Consensus 713 v~Q~~~i~~-~Tv~enI~fg~~---~~~~----~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal 784 (1510)
++|++.++. .|++||+.+... .+.+ ..++.++..++.. .......+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGD-----------RAKKKIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHH-----------HHhCchhhCCHHHHHHHHHHHHH
Confidence 999998765 599999987421 1111 1122222222221 12346678999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEec
Q 000438 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSG 850 (1510)
Q Consensus 785 ~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g 850 (1510)
+++|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++++.. +|++++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~-~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSEL-GEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHH-hCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999998655443 346999999999999864 9999999999998754
No 486
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=332.20 Aligned_cols=204 Identities=26% Similarity=0.390 Sum_probs=164.6
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------------e
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG---------------T 709 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g---------------~ 709 (1510)
++++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 688999999952 4699999999999999999999999999999999999999999998876 2
Q ss_pred EEEEcCCCc--CCCccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHH
Q 000438 710 TAYVAQTSW--IQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1510)
Q Consensus 710 iayv~Q~~~--i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal 784 (1510)
++|++|++. ++..|+.+|+.++.. .+.....+. ...-++.+... ........+||||||||++||||+
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~--~~~~~~~~~LSgG~~qrl~laraL 151 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRR-----VDEALTLVDAQ--HFRHQPIQCLSHGQKKRVAIAGAL 151 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCH--hHhcCCchhCCHHHHHHHHHHHHH
Confidence 789999975 466789999987522 111111110 11112222111 112456789999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000438 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLNS 858 (1510)
Q Consensus 785 ~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~~ 858 (1510)
+.+|+++||||||++||+.+.+.+.+.+.+...+|+|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 152 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 152 VLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999987655544468999999999999864 999999999999999998887653
No 487
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=2.2e-34 Score=324.46 Aligned_cols=203 Identities=25% Similarity=0.379 Sum_probs=164.1
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC-------------e
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-------------T 709 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g-------------~ 709 (1510)
..|+++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| .
T Consensus 6 ~~i~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (225)
T PRK10247 6 PLLQLQNVGYLAG---DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQ 82 (225)
T ss_pred ceEEEeccEEeeC---CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhc
Confidence 4699999999995 35799999999999999999999999999999999999999999999887 2
Q ss_pred EEEEcCCCcCCCccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCC
Q 000438 710 TAYVAQTSWIQNGTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCD 789 (1510)
Q Consensus 710 iayv~Q~~~i~~~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~ 789 (1510)
++|++|++.+++.|++||+.++..+...... .....+.++.+... .+....++.+||||||||++||||++.+|+
T Consensus 83 i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~----~~~~~~~l~~~~l~-~~~~~~~~~~LS~G~~qrv~laral~~~p~ 157 (225)
T PRK10247 83 VSYCAQTPTLFGDTVYDNLIFPWQIRNQQPD----PAIFLDDLERFALP-DTILTKNIAELSGGEKQRISLIRNLQFMPK 157 (225)
T ss_pred cEEEecccccccccHHHHHHhHHhhcCCChH----HHHHHHHHHHcCCC-hHHhcCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 7999999998888999999875321111100 01112333333221 123467788999999999999999999999
Q ss_pred EEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEe-CCEEEEecChH
Q 000438 790 IYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHNVDLILVMR-EGMIVQSGRYN 853 (1510)
Q Consensus 790 i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~~D~i~~l~-~G~i~~~g~~~ 853 (1510)
++||||||++||+.+.+.+.+.+.+... +|+|+|++||++++++.||++++|+ ++..+++|+|+
T Consensus 158 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 158 VLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999888765554433 4899999999999998899999995 66666777764
No 488
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.3e-34 Score=332.22 Aligned_cols=209 Identities=26% Similarity=0.364 Sum_probs=167.2
Q ss_pred cEEEeeeEEEccCC------CCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC---------
Q 000438 644 AVEVRDGVFSWDDE------NGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--------- 708 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~------~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--------- 708 (1510)
.++++|+++.|+.. .++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 47899999999632 135799999999999999999999999999999999999999999999876
Q ss_pred -------eEEEEcCCCc--C-CCccHHHHHhcCCC----CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHH
Q 000438 709 -------TTAYVAQTSW--I-QNGTIEENILFGLP----MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQ 774 (1510)
Q Consensus 709 -------~iayv~Q~~~--i-~~~Tv~enI~fg~~----~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 774 (1510)
.++|++|++. + ...|++||+.++.. ++....++ ...+-++.+... ....+.++.+|||||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~-~~~~~~~~~~LSgGe 155 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKA-----RIAELLDMVGLR-SEDADKLPRQLSGGQ 155 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCC-hhhhhCChhhCCHHH
Confidence 2799999973 3 35799999976421 11111110 111223333221 122356778999999
Q ss_pred HHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCcccc-CCEEEEEeCCEEEEecCh
Q 000438 775 KQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRY 852 (1510)
Q Consensus 775 kqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~ 852 (1510)
||||+||||++++|+++||||||++||+.+.+.+.+.+.+...+ |+|+|++||+++.+.. ||++++|++|++++.|+.
T Consensus 156 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (265)
T TIGR02769 156 LQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDV 235 (265)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCH
Confidence 99999999999999999999999999999998888765554443 8999999999999874 999999999999999999
Q ss_pred HHHHhc
Q 000438 853 NALLNS 858 (1510)
Q Consensus 853 ~~l~~~ 858 (1510)
+++...
T Consensus 236 ~~~~~~ 241 (265)
T TIGR02769 236 AQLLSF 241 (265)
T ss_pred HHHcCC
Confidence 998763
No 489
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-34 Score=299.99 Aligned_cols=213 Identities=23% Similarity=0.433 Sum_probs=185.9
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
|+.+|++++-.. +.+|+++||+++|||.+||+||||||||||+++|.|...|++|++.++|.|+++.+..++-++-++
T Consensus 2 i~a~nls~~~~G--r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 2 IRAENLSYSLAG--RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred eeeeeeEEEeec--ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 677888877643 458999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcccc-CcccHHHhcC----CCC---CCCHHH--HHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHH
Q 000438 1348 IPQEPVL-FEGTVRSNID----PIG---QYSDEE--IWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGR 1417 (1510)
Q Consensus 1348 IpQdp~L-F~gTIR~NLd----p~~---~~sd~e--I~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1417 (1510)
.||+..| |.-|++|-+. |.+ +..+++ ..++|.++.+..+-.+. | ..||||||||+.|||
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~---y--------~~LSGGEqQRVqlAR 148 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRD---Y--------RTLSGGEQQRVQLAR 148 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccc---h--------hhcCchHHHHHHHHH
Confidence 9999876 8889999874 542 223444 67899999987764332 1 258999999999999
Q ss_pred HHcc------CCCEEEEeCCCCCCCHHhHHHHHHHHHHHc-CCceEEEEecChhhhh-hcCEEEEEeCCEEEEecChhHH
Q 000438 1418 VMLK------HSRLLFMDEATASVDSQTDAEIQRIIREEF-AACTIISIAHRIPTVM-DCDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1418 ALLr------~~kILiLDEaTsslD~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~L 1489 (1510)
+|.+ .+++|+||||||+||..-...+.++.|+.. .++.|+.|=|+|+... .||||++|.+||++..|+|++.
T Consensus 149 vLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~v 228 (259)
T COG4559 149 VLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDV 228 (259)
T ss_pred HHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHh
Confidence 9985 356999999999999999999999999865 4789999999999765 5999999999999999999999
Q ss_pred hcCC
Q 000438 1490 LERP 1493 (1510)
Q Consensus 1490 l~~~ 1493 (1510)
+..+
T Consensus 229 lt~E 232 (259)
T COG4559 229 LTDE 232 (259)
T ss_pred cCHH
Confidence 9765
No 490
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.9e-34 Score=322.74 Aligned_cols=196 Identities=24% Similarity=0.388 Sum_probs=155.5
Q ss_pred EEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe---------------
Q 000438 645 VEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT--------------- 709 (1510)
Q Consensus 645 i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~--------------- 709 (1510)
++++|++++|+.. +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4688999999532 46999999999999999999999999999999999999999999998763
Q ss_pred -EEEEcCCCcCCC-ccHHHHHhcCCCCChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcC
Q 000438 710 -TAYVAQTSWIQN-GTIEENILFGLPMNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQD 787 (1510)
Q Consensus 710 -iayv~Q~~~i~~-~Tv~enI~fg~~~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~ 787 (1510)
++|++|++.++. .|++||+.++........++..+ .+..-++.+.. .........+||||||||++||||++.+
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~--~~~~~l~~~~l--~~~~~~~~~~LS~G~~qrv~laral~~~ 154 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRK--RVPAALELVGL--SHKHRALPAELSGGEQQRVAIARAIVNS 154 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHH--HHHHHHHHcCC--HHHhhCChhhcCHHHHHHHHHHHHHHcC
Confidence 799999997765 69999998763211000111000 11122222211 1123456678999999999999999999
Q ss_pred CCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEE
Q 000438 788 CDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMI 846 (1510)
Q Consensus 788 ~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i 846 (1510)
|+++||||||++||+++.+.+.+.+.+...+|+|+|++||+++++.. ||++++|++|++
T Consensus 155 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 155 PTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999987665544568999999999999875 899999999974
No 491
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=331.82 Aligned_cols=205 Identities=28% Similarity=0.415 Sum_probs=166.7
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe-------------E
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------T 710 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------i 710 (1510)
.++++|++++|+. ..++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 4789999999953 236999999999999999999999999999999999999999999999872 7
Q ss_pred EEEcCCCc--CCCccHHHHHhcCCC---CChhhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHh
Q 000438 711 AYVAQTSW--IQNGTIEENILFGLP---MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVY 785 (1510)
Q Consensus 711 ayv~Q~~~--i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~ 785 (1510)
+|++|++- +++.|++||+.++.. .+.+..++.. ..-++.+... ......+..||||||||++||||++
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~--~~~~~~~~~LS~Gq~qrl~laraL~ 153 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRV-----SSALHMLGLE--ELRDRVPHHLSGGEKKRVAIAGVIA 153 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHH-----HHHHHHCCCh--hHhcCCcccCCHHHHHHHHHHHHHH
Confidence 99999973 567899999987532 2222111111 1112222111 1234567899999999999999999
Q ss_pred cCCCEEEEeCccCCCChhHHHHHHHHHHhhhcC-CcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000438 786 QDCDIYLLDDVFSAVDAHTGSDIFKECVRGALK-GKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 786 ~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~-~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
.+|+++||||||++||+.+.+.+++.+.+...+ |+|+|++||+++++. .||++++|++|++++.|+++++.+
T Consensus 154 ~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 154 MEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 999999999999999999999988766554443 899999999999985 599999999999999999998865
No 492
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=7.6e-31 Score=319.28 Aligned_cols=442 Identities=19% Similarity=0.235 Sum_probs=308.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCChhhhccCCH--H---HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 000438 389 FNFNSQKLGMLIRCTLITSLYRKGLRLSCSARQAHGV--G---QIVNYMAVDAQQLSDMMLQLHA-VWLMPLQISVALIL 462 (1510)
Q Consensus 389 ~~~~~~~~g~riR~~L~~~Iy~K~L~ls~~~~~~~~~--G---~ivNlms~D~~ri~~~~~~~~~-~w~~plqi~lal~l 462 (1510)
..|..+++.++.|.-|+..+..|=|.-....+-.... + ..=..++-|+..+.+....+-. +.-..++++.-..+
T Consensus 106 ~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~i 185 (604)
T COG4178 106 QTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGI 185 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 4566779999999999999999999877544322221 2 2335788888887776544432 23333444444456
Q ss_pred HHHHHHHHH---------HHHHH--HHHHHHHHHHHHH----HHHHHHHHH-HHHHHHHHHHHHHHHHhHHHHHHHhccH
Q 000438 463 LYNCLGASV---------ITTVV--GIIGVMIFVVMGT----KRNNRFQFN-VMKNRDSRMKATNEMLNYMRVIKFQAWE 526 (1510)
Q Consensus 463 L~~~lG~s~---------l~gl~--~~~l~~~~~~~~~----~~~~~~q~~-~m~~~D~Rv~~~sEiL~~Ik~IKl~awE 526 (1510)
||...|.-+ +.|.. ++++.+++...++ |...+...+ ....-|-|- ....+..+-..|-+|+-|
T Consensus 186 Lw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~-~Lvrv~enaE~IAly~GE 264 (604)
T COG4178 186 LWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRY-SLVRVRENAEAIALYRGE 264 (604)
T ss_pred HHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHH-HHHHHHhhHHHHHHhcCc
Confidence 775555221 11211 2222333333333 322222111 122233343 344677888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCHHHHHHHHHHHHHHHHHHHHH
Q 000438 527 DHFNKRILSFRESEFGWLTKFMY----SISGNIIVMWSTPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNF 602 (1510)
Q Consensus 527 ~~f~~~I~~~R~~El~~l~~~~~----~~a~~~~~~~~~p~~v~~~tF~~~~l~~~~Lta~~vFt~lalf~iL~~pl~~l 602 (1510)
+.-++++.+.=..=++..++... +..++....++++++-.++... .++.+.++-+....+-..|+.+...+..+
T Consensus 265 ~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap--~~f~g~i~~G~lmqa~~aF~~v~sslswf 342 (604)
T COG4178 265 KVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAP--RYFSGQITFGGLMQAVGAFGQVHSSLSWF 342 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccH--hhhcCcChHHHHHHHHHHHHHHHHHHHHH
Confidence 88777765433322222222111 1112222223332111111111 23577899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccc---CccccccccCC------CCCCccEEEeeeEEEccCCCCccccceeeEEEeCC
Q 000438 603 PQSMISLSQAMISLARLDKYMLSRE---LVNESVERVEG------CDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKG 673 (1510)
Q Consensus 603 p~~i~~~~~a~vS~~RI~~fL~~~e---~~~~~~~~~~~------~~~~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G 673 (1510)
-..+..+.+=++++.|+.+|-.+=| .++. ....+. +..+..|+++|++..-++ +.+.+++.||++++|
T Consensus 343 i~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~--~~~ll~~l~~~v~~G 419 (604)
T COG4178 343 IDNYDAIADWRATLLRLAEFRQALEAAQMDTE-KPARTGRRIDFDDNADHGITLENLSLRTPD--GQTLLSELNFEVRPG 419 (604)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhccCccc-ccCcccccccccccccceeEEeeeeEECCC--CCeeeccceeeeCCC
Confidence 9999999999999999999986432 1110 000000 111578999999998764 348999999999999
Q ss_pred cEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECC--eEEEEcCCCcCCCccHHHHHhcCCC---CChhhHHHHHHHhch
Q 000438 674 DLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG--TTAYVAQTSWIQNGTIEENILFGLP---MNRAKYGEVVRVCCL 748 (1510)
Q Consensus 674 ~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g--~iayv~Q~~~i~~~Tv~enI~fg~~---~~~~~~~~v~~~~~l 748 (1510)
|.+.|.|+||||||||+++|+|..|--+|+|.... .+.|+||.|.++.||+||-|.+... +..+...+++..|+|
T Consensus 420 ~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL 499 (604)
T COG4178 420 ERLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGL 499 (604)
T ss_pred CEEEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCc
Confidence 99999999999999999999999999999998874 3799999999999999999999754 456778899999999
Q ss_pred HHHHHhcccCCcccccCCCCccChHHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccC
Q 000438 749 EKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQ 828 (1510)
Q Consensus 749 ~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~ 828 (1510)
.+-.+.++.-++ =...||||||||+++||.++++|++++|||.|||||+.+...+++. ++..+.+.|+|-|.|+
T Consensus 500 ~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~-l~~~lp~~tvISV~Hr 573 (604)
T COG4178 500 GDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQL-LKEELPDATVISVGHR 573 (604)
T ss_pred HHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHH-HHhhCCCCEEEEeccc
Confidence 998887765443 3357999999999999999999999999999999999999999865 4555689999999999
Q ss_pred CCccccCCEEEEEe
Q 000438 829 VDFLHNVDLILVMR 842 (1510)
Q Consensus 829 ~~~l~~~D~i~~l~ 842 (1510)
.......++.+.+.
T Consensus 574 ~tl~~~h~~~l~l~ 587 (604)
T COG4178 574 PTLWNFHSRQLELL 587 (604)
T ss_pred hhhHHHHhhheeec
Confidence 88776666655543
No 493
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.7e-34 Score=322.74 Aligned_cols=193 Identities=23% Similarity=0.320 Sum_probs=152.9
Q ss_pred eEEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceE
Q 000438 1267 NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFG 1346 (1510)
Q Consensus 1267 ~I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~ 1346 (1510)
.+-+.||+|.|+... +..++++|-|.--.+|+||||+|-|||||+++|.|-++|+.|+..=+ -|-+||
T Consensus 586 vLGlH~VtFgy~gqk-pLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn-----------hrL~iG 653 (807)
T KOG0066|consen 586 VLGLHDVTFGYPGQK-PLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN-----------HRLRIG 653 (807)
T ss_pred eeecccccccCCCCC-chhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc-----------ceeeee
Confidence 467899999998665 47999999999999999999999999999999999999999986533 355789
Q ss_pred EecCccc--c-CcccHHHhcCCCCCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000438 1347 IIPQEPV--L-FEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1510)
Q Consensus 1347 iIpQdp~--L-F~gTIR~NLdp~~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1423 (1510)
..-|... | -+.|--+.|.-.-+.+-++-+.+|...||........ -..||||||-|++||-.-|+.|
T Consensus 654 ~FdQh~~E~L~~Eetp~EyLqr~FNlpyq~ARK~LG~fGL~sHAHTik----------ikdLSGGQKaRValaeLal~~P 723 (807)
T KOG0066|consen 654 WFDQHANEALNGEETPVEYLQRKFNLPYQEARKQLGTFGLASHAHTIK----------IKDLSGGQKARVALAELALGGP 723 (807)
T ss_pred chhhhhHHhhccccCHHHHHHHhcCCChHHHHHHhhhhhhhhccceEe----------eeecCCcchHHHHHHHHhcCCC
Confidence 8888763 2 2336666664333456677788888888865432211 1358999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHHcCCceEEEEecChhhhhhcC-EEEEEeCCEEEEe
Q 000438 1424 RLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCD-RVIVVDAGWAKEF 1483 (1510)
Q Consensus 1424 kILiLDEaTsslD~~Td~~Iq~~I~~~f~~~TvI~IAHRl~ti~~~D-rIlVL~~G~ivE~ 1483 (1510)
+||||||||.+||.++-..+-++|++. +..||+|+|+-..|..-| ..+|+++-.|-|.
T Consensus 724 DvlILDEPTNNLDIESIDALaEAIney--~GgVi~VsHDeRLi~eT~C~LwVvE~Q~i~eI 782 (807)
T KOG0066|consen 724 DVLILDEPTNNLDIESIDALAEAINEY--NGGVIMVSHDERLIVETDCNLWVVENQGIDEI 782 (807)
T ss_pred CEEEecCCCCCcchhhHHHHHHHHHhc--cCcEEEEecccceeeecCceEEEEccCChhhc
Confidence 999999999999999999999999984 568999999988886533 2455555445443
No 494
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=3.3e-34 Score=316.76 Aligned_cols=192 Identities=19% Similarity=0.290 Sum_probs=164.4
Q ss_pred EEEEEEEEEecCCCCcceeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEE
Q 000438 1268 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGI 1347 (1510)
Q Consensus 1268 I~f~~vs~~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~i 1347 (1510)
++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRGE--RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DEPHRNILY 77 (198)
T ss_pred CEEEEEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccch-HHhhhheEE
Confidence 478999999974 35999999999999999999999999999999999999999999999999998765 456789999
Q ss_pred ecCccccCc-ccHHHhcCCC---CCCCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCC
Q 000438 1348 IPQEPVLFE-GTVRSNIDPI---GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHS 1423 (1510)
Q Consensus 1348 IpQdp~LF~-gTIR~NLdp~---~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1423 (1510)
+||++.+|. .|+++|+... ....++++.++++..++.+.....+ .+||+|||||++||||++++|
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la~al~~~p 146 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGLTGFEDLPA-----------AQLSAGQQRRLALARLWLSRA 146 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHHHHHHcCCHHHhcCCh-----------hhcCHHHHHHHHHHHHHhcCC
Confidence 999998886 6999999532 1112456889999999987653332 368999999999999999999
Q ss_pred CEEEEeCCCCCCCHHhHHHHHHHHHHH-cCCceEEEEecChhhhhhcCEEEE
Q 000438 1424 RLLFMDEATASVDSQTDAEIQRIIREE-FAACTIISIAHRIPTVMDCDRVIV 1474 (1510)
Q Consensus 1424 kILiLDEaTsslD~~Td~~Iq~~I~~~-f~~~TvI~IAHRl~ti~~~DrIlV 1474 (1510)
++|+|||||++||..+.+.+.+.|++. .++.|+|+++|+...+ .||+++.
T Consensus 147 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~-~~~~~~~ 197 (198)
T TIGR01189 147 PLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGL-VEARELR 197 (198)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccccc-cceEEee
Confidence 999999999999999999999999975 3578999999998443 4577664
No 495
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=1.4e-34 Score=325.47 Aligned_cols=186 Identities=25% Similarity=0.434 Sum_probs=161.2
Q ss_pred EEEeCCcEEEEECCCCCCHHHHHHHHhcccCCCCcEEEEcCeeCCCCCHHHhhcceEEecCcccc---CcccHHHhcCCC
Q 000438 1290 LSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVL---FEGTVRSNIDPI 1366 (1510)
Q Consensus 1290 ~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~L---F~gTIR~NLdp~ 1366 (1510)
|+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++. +.|++++|+||+|.+ |+.|+++|+...
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~-----~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~ 75 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPPAKGTVKVAGASPG-----KGWRHIGYVPQRHEFAWDFPISVAHTVMSG 75 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCccch-----HhhCcEEEecccccccCCCCccHHHHHHhc
Confidence 578999999999999999999999999999999999999998864 357789999999976 457999998531
Q ss_pred --------CC---CCHHHHHHHHHHcCchHHHHhCcCCccccccCCCCCCChhHHHHHHHHHHHccCCCEEEEeCCCCCC
Q 000438 1367 --------GQ---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASV 1435 (1510)
Q Consensus 1367 --------~~---~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~kILiLDEaTssl 1435 (1510)
.. ..++++.++++.+++.+.....+ ..||+|||||++|||||+++|++|||||||++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~p~llilDEP~~~L 144 (223)
T TIGR03771 76 RTGHIGWLRRPCVADFAAVRDALRRVGLTELADRPV-----------GELSGGQRQRVLVARALATRPSVLLLDEPFTGL 144 (223)
T ss_pred cccccccccCCcHHHHHHHHHHHHHhCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 11 12356888999999876543332 358999999999999999999999999999999
Q ss_pred CHHhHHHHHHHHHHHc-CCceEEEEecChhhhhh-cCEEEEEeCCEEEEecChhHHhcC
Q 000438 1436 DSQTDAEIQRIIREEF-AACTIISIAHRIPTVMD-CDRVIVVDAGWAKEFGKPSRLLER 1492 (1510)
Q Consensus 1436 D~~Td~~Iq~~I~~~f-~~~TvI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1492 (1510)
|+.+...+.+.|++.. ++.|+|+++|+++.+.+ ||+|+++ +|++++.|+++++.++
T Consensus 145 D~~~~~~l~~~l~~~~~~~~tvii~sH~~~~~~~~~d~i~~l-~G~i~~~~~~~~~~~~ 202 (223)
T TIGR03771 145 DMPTQELLTELFIELAGAGTAILMTTHDLAQAMATCDRVVLL-NGRVIADGTPQQLQDP 202 (223)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHHhcCh
Confidence 9999999999999864 47899999999999876 9999999 7999999999998765
No 496
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.2e-34 Score=326.12 Aligned_cols=208 Identities=22% Similarity=0.330 Sum_probs=168.1
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe--------------
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT-------------- 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~-------------- 709 (1510)
.|+++|+++.|++ +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 4789999999963 47999999999999999999999999999999999999999999999872
Q ss_pred EEEEcCCCcCCC-ccHHHHHhcCCCCChhhH------HHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHH
Q 000438 710 TAYVAQTSWIQN-GTIEENILFGLPMNRAKY------GEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLAR 782 (1510)
Q Consensus 710 iayv~Q~~~i~~-~Tv~enI~fg~~~~~~~~------~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 782 (1510)
++|++|++.++. .|++||+.++...+...+ ............++.+. .......+..+||||||||++|||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--l~~~~~~~~~~LS~Ge~qrv~lar 156 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIG--LADEADRLAGLLSHGQKQWLEIGM 156 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcC--CchhhcCChhhCCHHHHHHHHHHH
Confidence 789999998776 599999988643211000 00001111223333332 223456778899999999999999
Q ss_pred HHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 783 AVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 783 al~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
|++.+|+++||||||++||+.+.+.+.+.+.+ ..+++|+|++||++++++. ||+|++|++|++++.|+++++.+
T Consensus 157 al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 157 LLMQDPKLLLLDEPVAGMTDEETEKTAELLKS-LAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HHhcCCCEEEecCCccCCCHHHHHHHHHHHHH-HhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999998865544 3447999999999999875 99999999999999999888754
No 497
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-34 Score=330.51 Aligned_cols=210 Identities=24% Similarity=0.324 Sum_probs=167.6
Q ss_pred CccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccCCcEEEECCe------------
Q 000438 642 NIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCGT------------ 709 (1510)
Q Consensus 642 ~~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~~G~i~~~g~------------ 709 (1510)
...|+++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 5 ~~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (265)
T PRK10253 5 VARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVAR 81 (265)
T ss_pred ccEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhh
Confidence 457999999999963 47999999999999999999999999999999999999999999999873
Q ss_pred -EEEEcCCCcCC-CccHHHHHhcCC-CCCh--hhHHHHHHHhchHHHHHhcccCCcccccCCCCccChHHHHHHHHHHHH
Q 000438 710 -TAYVAQTSWIQ-NGTIEENILFGL-PMNR--AKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQRIQLARAV 784 (1510)
Q Consensus 710 -iayv~Q~~~i~-~~Tv~enI~fg~-~~~~--~~~~~v~~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARal 784 (1510)
++|++|++.++ +.|++||+.++. +... ..+.+..+ .....-++.+.. .......+.+||||||||++||||+
T Consensus 82 ~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~l--~~~~~~~~~~LS~Gq~qrv~laral 158 (265)
T PRK10253 82 RIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDE-EAVTKAMQATGI--THLADQSVDTLSGGQRQRAWIAMVL 158 (265)
T ss_pred heEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHH-HHHHHHHHHcCC--HHHhcCCcccCChHHHHHHHHHHHH
Confidence 79999998765 579999998763 1100 00000000 001111222211 1124567789999999999999999
Q ss_pred hcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000438 785 YQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNALLN 857 (1510)
Q Consensus 785 ~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l~~ 857 (1510)
+.+|+++||||||++||+.+.+.+.+.+.+... +|+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 159 ~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (265)
T PRK10253 159 AQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVT 233 (265)
T ss_pred hcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhh
Confidence 999999999999999999999999876655444 38999999999998765 99999999999999999888754
No 498
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=339.90 Aligned_cols=209 Identities=22% Similarity=0.335 Sum_probs=166.7
Q ss_pred cEEEeeeEEEccCCCC-ccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcc----cCCcEEEECCe---------
Q 000438 644 AVEVRDGVFSWDDENG-EECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMH----KISGKVKVCGT--------- 709 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~----~~~G~i~~~g~--------- 709 (1510)
.++++|++++|+.... ..+|+||||+|++||+++|+|+||||||||+++|+|+++ +++|+|.++|.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4789999999964322 469999999999999999999999999999999999997 48999999872
Q ss_pred --------EEEEcCCCc---CCCccHHHHHhcCC----CCChh-hHHHHHHHhchHHHHHhcccCC-cccccCCCCccCh
Q 000438 710 --------TAYVAQTSW---IQNGTIEENILFGL----PMNRA-KYGEVVRVCCLEKDLEMMEYGD-QTEIGERGINLSG 772 (1510)
Q Consensus 710 --------iayv~Q~~~---i~~~Tv~enI~fg~----~~~~~-~~~~v~~~~~l~~dl~~l~~gd-~t~ig~~g~~LSG 772 (1510)
++|++|+|. .+..|+.+++.... ....+ ..+++ .+-++.+...+ ....+..+.+|||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~------~~~L~~~gL~~~~~~l~~~p~~LSg 156 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRA------IDLLNQVGIPDPASRLDVYPHQLSG 156 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHH------HHHHHHCCCCChHHHHhCCchhCCH
Confidence 799999984 34467877765321 11111 11111 12233333222 1235678899999
Q ss_pred HHHHHHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCEEEEec
Q 000438 773 GQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGAL-KGKTIILVTHQVDFLH-NVDLILVMREGMIVQSG 850 (1510)
Q Consensus 773 GQkqRv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~-~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g 850 (1510)
||||||+||||++.+|+++|+||||++||+.++..+.+.+.+... .|.|+|+||||++.+. .||+|++|++|+|++.|
T Consensus 157 Gq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g 236 (326)
T PRK11022 157 GMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETG 236 (326)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999999876665544 4899999999999986 59999999999999999
Q ss_pred ChHHHHhc
Q 000438 851 RYNALLNS 858 (1510)
Q Consensus 851 ~~~~l~~~ 858 (1510)
+.+++.+.
T Consensus 237 ~~~~~~~~ 244 (326)
T PRK11022 237 KAHDIFRA 244 (326)
T ss_pred CHHHHhhC
Confidence 99998864
No 499
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=328.16 Aligned_cols=205 Identities=31% Similarity=0.400 Sum_probs=165.8
Q ss_pred cEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCccc-----CCcEEEECC----------
Q 000438 644 AVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHK-----ISGKVKVCG---------- 708 (1510)
Q Consensus 644 ~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~-----~~G~i~~~g---------- 708 (1510)
.++++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4889999999963 4699999999999999999999999999999999999974 799999887
Q ss_pred ---eEEEEcCCCc-CCCccHHHHHhcCCCCC-----hhhHHHHHHHhchHHHHHhcccCC--cccccCCCCccChHHHHH
Q 000438 709 ---TTAYVAQTSW-IQNGTIEENILFGLPMN-----RAKYGEVVRVCCLEKDLEMMEYGD--QTEIGERGINLSGGQKQR 777 (1510)
Q Consensus 709 ---~iayv~Q~~~-i~~~Tv~enI~fg~~~~-----~~~~~~v~~~~~l~~dl~~l~~gd--~t~ig~~g~~LSGGQkqR 777 (1510)
.++|++|++- .++.|++||+.++.... ...+.+. ..+.++.+...+ .........+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qr 154 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQER-----VRWALEKAQLWDEVKDRLDAPAGKLSGGQQQR 154 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHH-----HHHHHHHcCCCcchhhhhcCCcccCCHHHHHH
Confidence 3799999986 45789999998764321 1111111 112222222111 123456678999999999
Q ss_pred HHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCEEEEecChHHHH
Q 000438 778 IQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLH-NVDLILVMREGMIVQSGRYNALL 856 (1510)
Q Consensus 778 v~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~-~~D~i~~l~~G~i~~~g~~~~l~ 856 (1510)
|+||||++++|+++||||||++||+.+.+.+.+.+.+. .+++|+|++||+++++. .||++++|++|++++.|+.+++.
T Consensus 155 v~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 155 LCIARALAFQPEVLLADEPTANLDPENTAKIESLFLEL-KKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 99999999999999999999999999999998766544 45899999999999986 59999999999999999998876
Q ss_pred h
Q 000438 857 N 857 (1510)
Q Consensus 857 ~ 857 (1510)
+
T Consensus 234 ~ 234 (250)
T PRK14247 234 T 234 (250)
T ss_pred c
Confidence 4
No 500
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=327.41 Aligned_cols=206 Identities=28% Similarity=0.390 Sum_probs=166.6
Q ss_pred ccEEEeeeEEEccCCCCccccceeeEEEeCCcEEEEEcCCCCChHHHHHHHhcCcccC-----CcEEEECC---------
Q 000438 643 IAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKI-----SGKVKVCG--------- 708 (1510)
Q Consensus 643 ~~i~~~~~~f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKSTLl~~llG~~~~~-----~G~i~~~g--------- 708 (1510)
..++++|+++.|+. +++|+|+||+|++|++++|+|+||||||||+++|+|+++|+ +|+|.++|
T Consensus 3 ~~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~ 79 (251)
T PRK14249 3 PKIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLD 79 (251)
T ss_pred ceEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccC
Confidence 35889999999962 46999999999999999999999999999999999999987 69998765
Q ss_pred ------eEEEEcCCCcCCCccHHHHHhcCCCCC----hhhHHHHHHHhchHHHHHhccc--CCcccccCCCCccChHHHH
Q 000438 709 ------TTAYVAQTSWIQNGTIEENILFGLPMN----RAKYGEVVRVCCLEKDLEMMEY--GDQTEIGERGINLSGGQKQ 776 (1510)
Q Consensus 709 ------~iayv~Q~~~i~~~Tv~enI~fg~~~~----~~~~~~v~~~~~l~~dl~~l~~--gd~t~ig~~g~~LSGGQkq 776 (1510)
.++|++|++.++..|++||+.++.... ++..++.++ ..++.+.. ......+..+.+|||||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~l~~~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 80 VVNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVE-----KSLRQAALWDEVKDNLHKSGLALSGGQQQ 154 (251)
T ss_pred hHHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHH-----HHHHHhCCchhhhhHhhCCcccCCHHHHH
Confidence 389999999988889999999864321 111111111 11111111 1112346778899999999
Q ss_pred HHHHHHHHhcCCCEEEEeCccCCCChhHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCEEEEecChHHH
Q 000438 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHN-VDLILVMREGMIVQSGRYNAL 855 (1510)
Q Consensus 777 Rv~LARal~~~~~i~lLDep~salD~~~~~~i~~~~~~~~~~~~tvilvtH~~~~l~~-~D~i~~l~~G~i~~~g~~~~l 855 (1510)
||+||||++.+|+++||||||++||+.+...+.+.+.. ..+++|+|++||+++.+.. ||++++|++|++++.|+.+++
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~-~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQE-LKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHH-HhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 99999999999999999999999999999988765443 3468999999999999876 899999999999999998887
Q ss_pred Hh
Q 000438 856 LN 857 (1510)
Q Consensus 856 ~~ 857 (1510)
..
T Consensus 234 ~~ 235 (251)
T PRK14249 234 FS 235 (251)
T ss_pred Hh
Confidence 54
Done!