Query 000438
Match_columns 1510
No_of_seqs 485 out of 5726
Neff 7.5
Searched_HMMs 29240
Date Tue Mar 26 17:33:28 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000438.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_215-219//hhsearch_pdb/000438hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1658.8 124.0 1227 274-1504 2-1317(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1326.9 108.9 1169 325-1505 45-1272(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 774.6 65.3 515 988-1504 137-654 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 737.3 53.7 514 988-1503 109-625 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 705.1 55.8 564 935-1505 25-592 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 698.8 62.5 564 935-1504 11-579 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 678.6 60.7 561 937-1502 4-575 (578)
8 3b60_A Lipid A export ATP-bind 1.0 1 1 677.4 68.0 562 935-1503 13-579 (582)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 675.6 71.6 562 935-1503 13-579 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 666.8 68.0 564 937-1505 9-585 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1658.83 Aligned_cols=1227 Identities=18% Similarity=0.207 Sum_probs=923.3
Q ss_pred HHCCC-CCCCCCCCCCCCCHHCHHHHHHHHHHHCCCCCCC--------------CCCCCHHHHHHHH-HHHH---HHHHH
Q ss_conf 97004-6988879999999030388999999600899998--------------7897248999999-7999---99999
Q 000438 274 LSKGY-KSPLKIDEIPSLSPQHRAERMSELFESKWPKPHE--------------KCKHPVRTTLLRC-FWKE---VAFTA 334 (1510)
Q Consensus 274 ~~~g~-~~~L~~~Dl~~l~~~~~~~~~~~~f~~~~~~~~~--------------~~~~~l~~~l~~~-~~~~---~~~~~ 334 (1510)
++.|. |++|+..|.+++.|+|..+...+.+++.|..... ..++.-++.|++. -+++ ++++.
T Consensus 2 ~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Lfrya~~~d~~l~~~g~ 81 (1321)
T 4f4c_A 2 LRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVSIPQLYRYTTTLEKLLLFIGT 81 (1321)
T ss_dssp --CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCCHHHHTTTCCHHHHHHHHHHH
T ss_pred CCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHH
T ss_conf 87731006876354456795011100001134542435543343100122320256877999973156767899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-------CCC--------CCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999723-------999--------870-----56899999999999999999999999999
Q 000438 335 FLAIVRLCVMYVGPVLIQRFVDFTS-------GKS--------SSF-----YEGYYLVLILLVAKFVEVFSTHQFNFNSQ 394 (1510)
Q Consensus 335 ~~~l~~~~~~~~~P~ll~~li~~~~-------~~~--------~~~-----~~g~~~~~~l~~~~~~~~l~~~~~~~~~~ 394 (1510)
+++++..+..-+.++++..+++... ... ... ..-..++..++...+...++..-..+...
T Consensus 82 ~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~ 161 (1321)
T 4f4c_A 82 LVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCYL 161 (1321)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999970100014543000344310016899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999985489334305898899999999999999999-999999999999998899998887799999
Q 000438 395 KLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMM-LQLHAVWLMPLQISVALILLYNCLGASVIT 473 (1510)
Q Consensus 395 ~~g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~ivNlms~D~~~i~~~~-~~~~~lw~~plqi~ial~~L~~~lG~s~l~ 473 (1510)
.+|.|+-..+...+|+|.++++....+++++|+++|.++.|++++++++ ..+..++..+++++.++++++..-..-+++
T Consensus 162 ~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~l~lv 241 (1321)
T 4f4c_A 162 YVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQLTLV 241 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999978898998799848999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999978999999999999999999999389999985408999999999999999999999999999
Q 000438 474 TVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGWLTKFMYSISG 553 (1510)
Q Consensus 474 gl~v~i~~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~~EiL~~Ik~IK~~awE~~f~~~I~~~R~~El~~l~~~~~~~a~ 553 (1510)
.++++.+.+++..+++++..+++++.++..+++.+.++|.++|||+||+|+||+.+.++..+..++..+.-.+.....+.
T Consensus 242 ~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (1321)
T 4f4c_A 242 MLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFLGI 321 (1321)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999839999982142999999999999999999999999999
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9999999999--99999999999836765787899999999999999999999999999999999999998224347631
Q 000438 554 NIIVMWSTPV--LISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDKYMLSRELVNE 631 (1510)
Q Consensus 554 ~~~~~~~~p~--lv~~~tF~~~~l~~~~L~a~~vFt~lalf~~L~~pl~~lp~~i~~~~~a~vS~~Ri~~fL~~~e~~~~ 631 (1510)
........+. ++.+..++.+...++.++++.+|+++.++..+..|+..++..+..+.++.+|++||.+||+.++..++
T Consensus 322 ~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 401 (1321)
T 4f4c_A 322 SFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPVIDS 401 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999995998699999999999999999998999999999999999999999717853456
Q ss_pred C-CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC--
Q ss_conf 1-1135799997309996248980699996432001499728959999828999967999898458336774899879--
Q 000438 632 S-VERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKISGKVKVCG-- 708 (1510)
Q Consensus 632 ~-~~~~~~~~~~~~I~i~~~~f~w~~~~~~~~L~~inl~i~~G~lvaIvG~vGSGKSSLL~allGe~~~~~G~V~v~G-- 708 (1510)
. ....+....+..|+++|++|+|+..++.|+|+|+||++++|+++||||++|||||||+++|+|++++.+|+|.++|
T Consensus 402 ~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~~~G~I~idG~~ 481 (1321)
T 4f4c_A 402 SSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITIDGVD 481 (1321)
T ss_dssp SSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCCSEEEEEETTEE
T ss_pred CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 66556567788876799985540799998743333188622882789980589857788887545651644861579965
Q ss_pred -----------EEEEECCCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf -----------5799817876888648999823999-9952399999985209999743468853125798866847999
Q 000438 709 -----------TTAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGERGINLSGGQKQ 776 (1510)
Q Consensus 709 -----------~iaYv~Q~pwi~n~TIreNIlFG~~-~d~~~y~~vi~ac~L~~Dl~~lp~Gd~T~IGe~G~nLSGGQKq 776 (1510)
++|||+|+||++|+||||||+||+| .+++++.++++.|++++|++.||+||+|+|||+|.+|||||||
T Consensus 482 i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vGe~G~~LSGGQkQ 561 (1321)
T 4f4c_A 482 VRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQKQ 561 (1321)
T ss_dssp TTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEESSSSCCCCHHHHH
T ss_pred CHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCHHHHH
T ss_conf 01125999850466658753320786167886415522099999999875654688708888860755898877777879
Q ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999987049979997076677896579999999995530996999980487720138889999397798914957897
Q 000438 777 RIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMIVQSGRYNALL 856 (1510)
Q Consensus 777 RIsLARAlY~~adI~LLDDp~SalD~~v~~~If~~~i~g~l~~kTvIlVTH~l~~l~~aD~Iivl~~G~I~~~G~~~el~ 856 (1510)
||+||||+|+||+||+|||||||||++++ +++++++.+++++||+|+|||+++.++.||+|++|++|+|+++|+|+||+
T Consensus 562 RiaiARAl~~~~~IliLDE~tSaLD~~te-~~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G~ive~Gth~eL~ 640 (1321)
T 4f4c_A 562 RIAIARALVRNPKILLLDEATSALDAESE-GIVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRALM 640 (1321)
T ss_dssp HHHHHHHHTTCCSEEEEESTTTTSCTTTH-HHHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETTEEEEEECHHHHH
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHH-HHHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECCEEECCCCHHHHH
T ss_conf 99999987259998998455446887899-99999999984798899973638789868989996399651368999999
Q ss_pred HCCCCHHHHHHHHHHHHHHHHCCCCC--CCCCCCC----CCCCCCCCCCCCCCCCC-----------CCCCCCCCCC--C
Q ss_conf 11764689999864333353215668--8999999----99998754211000367-----------8532344665--6
Q 000438 857 NSGMDFGALVAAHETSMELVEVGKTM--PSGNSPK----TPKSPQITSNLQEANGE-----------NKSVEQSNSD--K 917 (1510)
Q Consensus 857 ~~~~~f~~l~~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~--~ 917 (1510)
+.++.|.++...+..........+.. .+..... ........+........ ....++.+.. .
T Consensus 641 ~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 720 (1321)
T 4f4c_A 641 AQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSITNGPVIDEKEERIGK 720 (1321)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHCC--------------------------------------------------CCCCC
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHCCC
T ss_conf 85327999999622122223323344332232111222223422222221102211101321245677402577753154
Q ss_pred CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC----CCCCCCCCCHHHHHHH
Q ss_conf 773121688773175008999999997234599999999999999986543424110245----5777888912779999
Q 000438 918 GNSKLIKEEERETGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETS----EDHSMSFNPSLFIGVY 993 (1510)
Q Consensus 918 ~~~~l~~~e~~~~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~----~~~~~~~~~~~~~~vy 993 (1510)
.......++.++.+......++.|......++.+.+.+++.++.........+|+..|.+ ..........++..+|
T Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1321)
T 4f4c_A 721 DALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWALMF 800 (1321)
T ss_dssp CHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 03899999999707863109999999877899999999999999999999999999999875179345566789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99989999999999999999999999999999999884388522123--5602479999625768544657999999999
Q 000438 994 GSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDT--TPSGRILSRASTDQTNIDLFLPFFVGITVAM 1071 (1510)
Q Consensus 994 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~--~p~G~ilnR~s~D~~~id~~i~~~~~~~~~~ 1071 (1510)
.+++++..++.+++.+++...+.++++++|.+++++++++|++|||+ +|+|+++||+++|++.+|..++..+..++..
T Consensus 801 ~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~ 880 (1321)
T 4f4c_A 801 LVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITT 880 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999988873499333216788848888502505999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf 99999999999987577999999999999999999999999999999763212699999852116999871738899999
Q 000438 1072 YITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQE 1151 (1510)
Q Consensus 1072 ~~~~~~~~~i~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~~ 1151 (1510)
.+.+++.++++++.+|.+.+++++++++.++...++.+..+...+......++...++.|+++|+.+||+|+.|++|.++
T Consensus 881 ~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~ 960 (1321)
T 4f4c_A 881 LVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYEN 960 (1321)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHH
T ss_pred HHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 65377770221378689999999988899999999999999999999999888988999999627988861414889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999977645999985766999999999999999999999-986067--658669999999999999999999999999
Q 000438 1152 NVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLFM-ILLPSS--IIKPENVGLSLSYGLSLNGVLFWAIYMSCF 1228 (1510)
Q Consensus 1152 ~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~-v~~~~~--~~~~g~~gl~l~y~l~l~~~l~~~v~~~~~ 1228 (1510)
+.+..+...+..+.......+.......+..+...++..+. ..+..+ .++++.+...+.+.......+.++.....+
T Consensus 961 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 1040 (1321)
T 4f4c_A 961 FCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFPE 1040 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999875788753765421478999999998778899999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCC-CCCEEEEEEEEECCCEEEEECCCCCC
Q ss_conf 99996899999984038511111135899999999973089997787846999-94033225998489299999799997
Q 000438 1229 VENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNT-PLVLKGITLSIHGGEKIGVVGRTGSG 1307 (1510)
Q Consensus 1229 le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~-~~vL~~isl~I~~GekvgIVGrTGSG 1307 (1510)
++..+.+++|+.++.+.++|.+ +...+++.||..|.|+|+||+|+|+.+. .+||+|+||+|+||||||||||||||
T Consensus 1041 ~~~~~~a~~ri~~~l~~~~~~~---~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsG 1117 (1321)
T 4f4c_A 1041 YAKATFAGGIIFGMLRKISKID---SLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCG 1117 (1321)
T ss_dssp HHHHHHHHHHHHHHHHCCCSSC---TTCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEEECSTTSS
T ss_pred HHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCH
T ss_conf 9999999998999860766577---7667787888888189998798579999882124516998898999998999981
Q ss_pred HHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCC---CCCCHHHHHHHHHHCCCH
Q ss_conf 88999998405689973899959637999977761020786476665755477703889---999999999999983953
Q 000438 1308 KSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI---GQYSDEEIWKSLERCQLK 1384 (1510)
Q Consensus 1308 KSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~---~~~sd~eI~~aL~~~~L~ 1384 (1510)
||||+++|+|+|+|++|+|.|||+||+++++++||+++++|||||+||+||||+||..+ .+++|+|||+|+++++++
T Consensus 1118 KSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~ 1197 (1321)
T 4f4c_A 1118 KSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIH 1197 (1321)
T ss_dssp TTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCH
T ss_conf 99999999568638997899999986549999998545998789973272399997454999999999999999982984
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
Q ss_conf 89972858752100189998890599999999998259979998279999998859999999998827936999803903
Q 000438 1385 DVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIP 1464 (1510)
Q Consensus 1385 ~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ 1464 (1510)
++|.++|+||||.|+|+|.||||||||||||||||||+|+|||||||||+||++||+.||++|++.+++||+|+||||++
T Consensus 1198 ~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~~~~TvI~IAHRLs 1277 (1321)
T 4f4c_A 1198 NFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCIVIAHRLN 1277 (1321)
T ss_dssp HHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTSSSSEEEEECSSSS
T ss_pred HHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHH
T ss_conf 99971767899982388915699999999999999717998999681115789999999999999739998999606899
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHCCCCHHHHHHHHHH
Q ss_conf 4530197999959779895591578209928999999996
Q 000438 1465 TVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEYA 1504 (1510)
Q Consensus 1465 ti~~~DrIlVl~~G~ivE~gsp~~Ll~~~~~f~~l~~~~~ 1504 (1510)
|+++||||+|||+|+|+|+|+|++|++++|.|++|++...
T Consensus 1278 Ti~~aD~I~Vld~G~IvE~Gth~eLl~~~g~y~~L~~~Q~ 1317 (1321)
T 4f4c_A 1278 TVMNADCIAVVSNGTIIEKGTHTQLMSEKGAYYKLTQKQM 1317 (1321)
T ss_dssp TTTTCSEEEEESSSSEEEEECHHHHHHCC-----------
T ss_pred HHHHCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHH
T ss_conf 9996999999989899998888999849809999999998
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1326.89 Aligned_cols=1169 Identities=19% Similarity=0.218 Sum_probs=851.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---------CC----------CHHHHHHHHHHHHHHHHHHHH
Q ss_conf 97999999999999999999999999999999723999---------87----------056899999999999999999
Q 000438 325 CFWKEVAFTAFLAIVRLCVMYVGPVLIQRFVDFTSGKS---------SS----------FYEGYYLVLILLVAKFVEVFS 385 (1510)
Q Consensus 325 ~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~---------~~----------~~~g~~~~~~l~~~~~~~~l~ 385 (1510)
..|..++++.++.++..++..+.|+++..+++...... .. ......++..++...++..++
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (1284)
T 3g5u_A 45 LDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIV 124 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999999999999999999999999999999986134443322222211111002446889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999998548933430589889999999999999999999-9999999999998899998
Q 000438 386 THQFNFNSQKLGMLIRCTLITSLYRKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQ-LHAVWLMPLQISVALILLY 464 (1510)
Q Consensus 386 ~~~~~~~~~~~g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~ivNlms~D~~~i~~~~~~-~~~lw~~plqi~ial~~L~ 464 (1510)
.-...+...+.+.++-..+...+|+|.++++.....++++|+++|.++.|++.+.+.... +..+....+.++.++++++
T Consensus 125 ~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~ 204 (1284)
T 3g5u_A 125 AYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGF 204 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999986998997568877899999988999999999999999999999999999999
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88779-99999999999999999999997899999999999999999999938999998540899999999999999999
Q 000438 465 NCLGA-SVITTVVGIIGVMIFVVMGTKRNNRFQFNVMKNRDSRMKATNEMLNYMRVIKFQAWEDHFNKRILSFRESEFGW 543 (1510)
Q Consensus 465 ~~lG~-s~l~gl~v~i~~~~~~~~~~~~~~~~q~~~m~~~D~R~~~~~EiL~~Ik~IK~~awE~~f~~~I~~~R~~El~~ 543 (1510)
. +.| .+++.++++.++..+..++.+...+..++.++..++......|.++||++||.|++|+.+.++..+.-++-.+.
T Consensus 205 ~-~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~~ 283 (1284)
T 3g5u_A 205 T-RGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRL 283 (1284)
T ss_dssp H-TTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 9-989999999999999999999999999999999999999999999999978799998465399999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999--9999999999999983676578789999999999999999999999999999999999999
Q 000438 544 LTKFMYSISGNIIVMWS--TPVLISTLTFATALLFGVPLDAGSVFTTTTIFKILQEPIRNFPQSMISLSQAMISLARLDK 621 (1510)
Q Consensus 544 l~~~~~~~a~~~~~~~~--~p~lv~~~tF~~~~l~~~~L~a~~vFt~lalf~~L~~pl~~lp~~i~~~~~a~vS~~Ri~~ 621 (1510)
-.+.....+........ .-..+....++.+....+.++++.+++++..+.....|+..+...+..+.++.++.+|+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~ 363 (1284)
T 3g5u_A 284 GIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFK 363 (1284)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999299889999999999999999999999999999999999999999
Q ss_pred HHCCCCC-CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCC
Q ss_conf 8224347-631111357999973099962489806999964320014997289599998289999679998984583367
Q 000438 622 YMLSREL-VNESVERVEGCDDNIAVEVRDGVFSWDDENGEECLKNINLEIKKGDLTAIVGTVGSGKSSLLASILGEMHKI 700 (1510)
Q Consensus 622 fL~~~e~-~~~~~~~~~~~~~~~~I~i~~~~f~w~~~~~~~~L~~inl~i~~G~lvaIvG~vGSGKSSLL~allGe~~~~ 700 (1510)
+++.++. ++......+.......|+++|++|+|+...+.++|+|+||++++|+.++|+|++|||||||+++|+|++++.
T Consensus 364 ~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~g~~~~~ 443 (1284)
T 3g5u_A 364 IIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPL 443 (1284)
T ss_dssp TTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHTTTSSCCS
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 97289867766656777777777189999899769999871012545897599889998999997999999980788999
Q ss_pred CCEEEECCE-------------EEEECCCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCC
Q ss_conf 748998795-------------799817876888648999823999-995239999998520999974346885312579
Q 000438 701 SGKVKVCGT-------------TAYVAQTSWIQNGTIEENILFGLP-MNRAKYGEVVRVCCLEKDLEMMEYGDQTEIGER 766 (1510)
Q Consensus 701 ~G~V~v~G~-------------iaYv~Q~pwi~n~TIreNIlFG~~-~d~~~y~~vi~ac~L~~Dl~~lp~Gd~T~IGe~ 766 (1510)
+|+|.++|. ++||+|+||++++||+|||.||.+ .+.+++.++++.|++.++++.+|+|++|.+||+
T Consensus 444 ~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~ 523 (1284)
T 3g5u_A 444 DGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQFDTLVGER 523 (1284)
T ss_dssp EEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGGGCCCSSS
T ss_pred CEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
T ss_conf 73899999987757999998654898688753776699997457989999999999998296999974656334501478
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEECCEE
Q ss_conf 88668479999999998704997999707667789657999999999553099699998048772013888999939779
Q 000438 767 GINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSDIFKECVRGALKGKTIILVTHQVDFLHNVDLILVMREGMI 846 (1510)
Q Consensus 767 G~nLSGGQKqRIsLARAlY~~adI~LLDDp~SalD~~v~~~If~~~i~g~l~~kTvIlVTH~l~~l~~aD~Iivl~~G~I 846 (1510)
|.+|||||||||+||||+|++|+|++||||+|+||+++.+.+ ++++....+|+|+|+|||+++.+..||+|++|++|+|
T Consensus 524 g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~i~~~d~i~vl~~G~i 602 (1284)
T 3g5u_A 524 GAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVV-QAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVI 602 (1284)
T ss_dssp SCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHH-HHHHHHHHTTSEEEEECSCHHHHTTCSEEEECSSSCC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEE
T ss_conf 786599999999999999529998999798777799999999-9999997399989999407789974998999989999
Q ss_pred EEECCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 89149578971176468999986433335321566889999999999875421100036785323446656773121688
Q 000438 847 VQSGRYNALLNSGMDFGALVAAHETSMELVEVGKTMPSGNSPKTPKSPQITSNLQEANGENKSVEQSNSDKGNSKLIKEE 926 (1510)
Q Consensus 847 ~~~G~~~el~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e 926 (1510)
++.|+++++++.++.|.++...+....+..................................................++
T Consensus 603 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1284)
T 3g5u_A 603 VEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSICGPHDQDRKLSTKE 682 (1284)
T ss_dssp CCEECHHHHHHTTSHHHHHHHHTC--------------------------------------------------------
T ss_pred EEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 99788999986787799999974300221113333332222234433333333200034543334456422332110245
Q ss_pred HHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHCCCCCCCC--CCCCHHHHHHHHHHHH
Q ss_conf 773--175008999999997234599999999999999986543424----11024557778--8891277999999989
Q 000438 927 ERE--TGKVGLHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYW----LSYETSEDHSM--SFNPSLFIGVYGSTAV 998 (1510)
Q Consensus 927 ~~~--~g~v~~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~w----l~~~~~~~~~~--~~~~~~~~~vy~~l~~ 998 (1510)
+.+ .....+..++.|.+...... .+.+++.++..+......++ +..+.+..... ......+..+|.++++
T Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~i 760 (1284)
T 3g5u_A 683 ALDEDVPPASFWRILKLNSTEWPYF--VVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGI 760 (1284)
T ss_dssp -CCCCCSCCCTTHHHHHHHHTCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHCCHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 5531366258999999845157999--99999999999999999999999999985568503367799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999988438852212--3560247999962576854465799999999999999
Q 000438 999 LSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFD--TTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLL 1076 (1510)
Q Consensus 999 ~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd--~~p~G~ilnR~s~D~~~id~~i~~~~~~~~~~~~~~~ 1076 (1510)
+..++.+++.+.+...+.+...++|.+++++++++|++||| .+|+|+++||+++|++.++..++..+..++...+.++
T Consensus 761 ~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~ 840 (1284)
T 3g5u_A 761 ISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLG 840 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999839988875789988999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Q ss_conf 9999999875779999---9999999999999999999999999976321269999985211699987173889999999
Q 000438 1077 GIFIITCQYAWPTIFL---VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENV 1153 (1510)
Q Consensus 1077 ~~~~i~~~~~~~~~~~---~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~~~~ 1153 (1510)
+.+++++.++|.+.++ ++|++++..++...+... ..+......+....++.|++.|+.+||+|+.++++.+++.
T Consensus 841 ~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~ 917 (1284)
T 3g5u_A 841 TGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSG---QALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYA 917 (1284)
T ss_dssp HHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 9999999996999999999999999999999999999---9999999999999999999988999998465999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999977645999985766999999999999999---99999-99860676586699999999999999999999999999
Q 000438 1154 NRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFC---LATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFV 1229 (1510)
Q Consensus 1154 ~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~---~~~~~-~v~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~~~l 1229 (1510)
+..+...+...... .|.+....+...+... ....+ ...+..+.++.+.+...+.+.......+..+......+
T Consensus 918 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 994 (1284)
T 3g5u_A 918 QSLQIPYRNAMKKA---HVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDY 994 (1284)
T ss_dssp HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCS
T ss_pred HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999---999999999999999999999999999999098069999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCCCCCH
Q ss_conf 999689999998403851111113589999999997308999778784699-9940332259984892999997999978
Q 000438 1230 ENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGK 1308 (1510)
Q Consensus 1230 e~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIVGrTGSGK 1308 (1510)
+....+++|+.++.+.+++.....+. +.+.++..|.|+|+||+++|+.. ..++|+|+||+|++||++||||+|||||
T Consensus 995 ~~~~~a~~ri~~~l~~~~~~~~~~~~--~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGK 1072 (1284)
T 3g5u_A 995 AKATVSASHIIRIIEKTPEIDSYSTQ--GLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGK 1072 (1284)
T ss_dssp THHHHHHHHHHHHHHSCCSSSSCCSS--CCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSSTTH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCCCCH
T ss_conf 99999999999998388766665556--6545677785799998997799998700203059976998899988999978
Q ss_pred HHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCC---CCCCHHHHHHHHHHCCCHH
Q ss_conf 8999998405689973899959637999977761020786476665755477703889---9999999999999839538
Q 000438 1309 STLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI---GQYSDEEIWKSLERCQLKD 1385 (1510)
Q Consensus 1309 STLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~---~~~sd~eI~~aL~~~~L~~ 1385 (1510)
|||+++|+|+++|++|+|.+||.|+++++++++|+++++|||||.+|++|||+|+.+. ...++++++++++++++++
T Consensus 1073 STl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~~~ 1152 (1284)
T 3g5u_A 1073 STVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQ 1152 (1284)
T ss_dssp HHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHH
T ss_conf 99999994686789977989999800078999970268987787406666999974668778999999999999839599
Q ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHH
Q ss_conf 99728587521001899988905999999999982599799982799999988599999999988279369998039034
Q 000438 1386 VVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPT 1465 (1510)
Q Consensus 1386 ~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~t 1465 (1510)
++.++|+||||.|+|+|.+||||||||+||||||+++|+|||||||||+||.++++.|++.|++..+++|+|+||||+++
T Consensus 1153 ~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi~isH~l~~ 1232 (1284)
T 3g5u_A 1153 FIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLST 1232 (1284)
T ss_dssp HHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEEEECSCTTG
T ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHH
T ss_conf 99727042456117888933899999999999997499999986875557999999999999986799989999558799
Q ss_pred HHHCCEEEEEECCEEEEECCHHHHHCCCCHHHHHHHHHHH
Q ss_conf 5301979999597798955915782099289999999964
Q 000438 1466 VMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEYAN 1505 (1510)
Q Consensus 1466 i~~~DrIlVl~~G~ivE~gsp~~Ll~~~~~f~~l~~~~~~ 1505 (1510)
+.+||||+||++|+++|.|+|++|++++|.|++|++....
T Consensus 1233 i~~~dri~vl~~G~i~~~g~~~~l~~~~g~y~~l~~~q~~ 1272 (1284)
T 3g5u_A 1233 IQNADLIVVIQNGKVKEHGTHQQLLAQKGIYFSMVSVQAG 1272 (1284)
T ss_dssp GGSCSEEEEEETBEEEEEECHHHHHHSCSHHHHHHHHHC-
T ss_pred HHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHH
T ss_conf 9809989999899899977899998477779999999761
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=774.57 Aligned_cols=515 Identities=19% Similarity=0.263 Sum_probs=450.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77999999989999999999999999999999999999999884388522123560247999962576854465799999
Q 000438 988 LFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGI 1067 (1510)
Q Consensus 988 ~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~i~~~~~~ 1067 (1510)
.+...|++++++..++.+++.+++.+.+.+...+++.++++++++.|++|||++++|++++|+++|++.++..+...+..
T Consensus 137 ~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~ 216 (1321)
T 4f4c_A 137 NVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGM 216 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999997889899879984899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 99999999999999998757799999999999999999999999999999976321269999985211699987173889
Q 000438 1068 TVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTT 1147 (1510)
Q Consensus 1068 ~~~~~~~~~~~~~i~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~ 1147 (1510)
++...+.+++.++++++.+|.+.++++..+++...+..++.+..+...+......+...+++.|+++|+.+||+|++|+.
T Consensus 217 ~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 296 (1321)
T 4f4c_A 217 AFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRY 296 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999983999998214299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999997764599998576699999999999999999999-99860676586699999999999999999999999
Q 000438 1148 FYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMS 1226 (1510)
Q Consensus 1148 f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~ 1226 (1510)
+.+++.+..+...+..........+......++..+...++..+ ...+..+.+++|.+...+.|...+..++..+....
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~ 376 (1321)
T 4f4c_A 297 ELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQL 376 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999599869999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCCC
Q ss_conf 999999689999998403851111113589999999997308999778784699-9940332259984892999997999
Q 000438 1227 CFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTG 1305 (1510)
Q Consensus 1227 ~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIVGrTG 1305 (1510)
..+.....+.+|+.++.+.+++.+... .......+..|.|+|+||+|+|+.. ..++|+|+||+|++||++||||+||
T Consensus 377 ~~~~~~~~s~~ri~~~l~~~~~~~~~~--~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sG 454 (1321)
T 4f4c_A 377 AVLGTAQGAASGIYEVLDRKPVIDSSS--KAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSG 454 (1321)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCSSCSS--SCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCC
T ss_conf 999999999999999971785345666--556567788876799985540799998743333188622882789980589
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCH
Q ss_conf 97889999984056899738999596379999777610207864766657554777038899-99999999999983953
Q 000438 1306 SGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLK 1384 (1510)
Q Consensus 1306 SGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~-~~sd~eI~~aL~~~~L~ 1384 (1510)
||||||+++|+|+|+|.+|+|.|||+|+++++++++|+++++|||||.||+||||+||..+. +++|+++++|++.|+++
T Consensus 455 sGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~ 534 (1321)
T 4f4c_A 455 CGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAE 534 (1321)
T ss_dssp SCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCH
T ss_conf 85778888754565164486157996501125999850466658753320786167886415522099999999875654
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
Q ss_conf 89972858752100189998890599999999998259979998279999998859999999998827936999803903
Q 000438 1385 DVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIP 1464 (1510)
Q Consensus 1385 ~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ 1464 (1510)
++++.+|+|+||.|||+|.|||||||||||||||++++|+|+|||||||+||++||+.|++.|++..+++|+|+||||++
T Consensus 535 ~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrls 614 (1321)
T 4f4c_A 535 KFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRLS 614 (1321)
T ss_dssp HHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCTT
T ss_pred HHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHH
T ss_conf 68870888886075589887777787999999987259998998455446887899999999999847988999736387
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHCCCCHHHHHHHHHH
Q ss_conf 4530197999959779895591578209928999999996
Q 000438 1465 TVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEYA 1504 (1510)
Q Consensus 1465 ti~~~DrIlVl~~G~ivE~gsp~~Ll~~~~~f~~l~~~~~ 1504 (1510)
++.+||+|+||++|+|+|.|+|++|++++|.|++|++...
T Consensus 615 ~i~~aD~Iivl~~G~ive~Gth~eL~~~~g~y~~l~~~q~ 654 (1321)
T 4f4c_A 615 TIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQT 654 (1321)
T ss_dssp TTTTCSEEEEEETTEEEEEECHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 8986898999639965136899999985327999999622
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=737.25 Aligned_cols=514 Identities=22% Similarity=0.301 Sum_probs=441.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 77999999989999999999999999999999999999999884388522123560247999962576854465799999
Q 000438 988 LFIGVYGSTAVLSMVILVVRAYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGI 1067 (1510)
Q Consensus 988 ~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~i~~~~~~ 1067 (1510)
.+..+|.+++++..++.+++.++....+.+...++|.+++++++++|++|||++++|+++||+++|++.++..++..+..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~ 188 (1284)
T 3g5u_A 109 TYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGM 188 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998699899756887789999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 99999999999999998757799999999999999999999999999999976321269999985211699987173889
Q 000438 1068 TVAMYITLLGIFIITCQYAWPTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTT 1147 (1510)
Q Consensus 1068 ~~~~~~~~~~~~~i~~~~~~~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~ 1147 (1510)
++...+.+++.+++++..+|.+.++++..+++++.+..++.+..++..+......++..+++.|+++|+.+||+|+.|++
T Consensus 189 ~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~ 268 (1284)
T 3g5u_A 189 FFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKK 268 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999978799998465399
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999997764599998576699999999999999999999-99860676586699999999999999999999999
Q 000438 1148 FYQENVNRVNGNLRMDFHNNGSNEWLGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMS 1226 (1510)
Q Consensus 1148 f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~ 1226 (1510)
+.+++.+..+...+..........+......++......++.++ ...+..+.+++|.+...+.+.......+..+...+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 348 (1284)
T 3g5u_A 269 ELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNI 348 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999299889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCCC
Q ss_conf 999999689999998403851111113589999999997308999778784699-9940332259984892999997999
Q 000438 1227 CFVENRMVSVERIKQFTEIPSEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTG 1305 (1510)
Q Consensus 1227 ~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIVGrTG 1305 (1510)
..++....+++|+.++.+.+++.+...+...++ .+..|.|+|+|++|+|+.+ ..++|+|+||+|++||++||||+||
T Consensus 349 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~--~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sG 426 (1284)
T 3g5u_A 349 EAFANARGAAYEVFKIIDNKPSIDSFSKSGHKP--DNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSG 426 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCC--TTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCC
T ss_conf 999999999999999972898677666567777--777771899998997699998710125458975998899989999
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCC-CCCCHHHHHHHHHHCCCH
Q ss_conf 9788999998405689973899959637999977761020786476665755477703889-999999999999983953
Q 000438 1306 SGKSTLIQVFFRLVEPSGGRIIIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLK 1384 (1510)
Q Consensus 1306 SGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~-~~~sd~eI~~aL~~~~L~ 1384 (1510)
||||||+++|.|+++|++|+|.+||.|+++++++++|+++++|||||.+|+||||+|+... .+.++++++++++.++++
T Consensus 427 sGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~ 506 (1284)
T 3g5u_A 427 CGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAY 506 (1284)
T ss_dssp SSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCH
T ss_conf 97999999980788999738999999877579999986548986887537766999974579899999999999982969
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
Q ss_conf 89972858752100189998890599999999998259979998279999998859999999998827936999803903
Q 000438 1385 DVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIP 1464 (1510)
Q Consensus 1385 ~~i~~lp~gLdt~v~e~G~nLSgGQrQrl~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ 1464 (1510)
+++..+|+|+||.++|+|.+||||||||+|||||++++|+|||||||||+||++|++.|++.+++..+++|+|+||||++
T Consensus 507 ~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~ 586 (1284)
T 3g5u_A 507 DFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLS 586 (1284)
T ss_dssp HHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHH
T ss_pred HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHH
T ss_conf 99974656334501478786599999999999999529998999798777799999999999999739998999940778
Q ss_pred HHHHCCEEEEEECCEEEEECCHHHHHCCCCHHHHHHHHH
Q ss_conf 453019799995977989559157820992899999999
Q 000438 1465 TVMDCDRVIVVDAGWAKEFGKPSRLLERPSLFGALVQEY 1503 (1510)
Q Consensus 1465 ti~~~DrIlVl~~G~ivE~gsp~~Ll~~~~~f~~l~~~~ 1503 (1510)
++.+||+|+||++|+++|.|+|++|+++++.|++++...
T Consensus 587 ~i~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 625 (1284)
T 3g5u_A 587 TVRNADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQ 625 (1284)
T ss_dssp HHTTCSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHT
T ss_pred HHHCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHH
T ss_conf 997499899998999999788999986787799999974
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=705.10 Aligned_cols=564 Identities=22% Similarity=0.320 Sum_probs=479.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999972345999999999999999865434241102455777-8889-127799999998999999999999999
Q 000438 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHS-MSFN-PSLFIGVYGSTAVLSMVILVVRAYFVT 1012 (1510)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~-~~~~-~~~~~~vy~~l~~~~~~~~~~~~~~~~ 1012 (1510)
+..++.|++..+ +.+.+.+++.++..++.+..++++....+.... .... ...++.++.++.++..++.+++.+...
T Consensus 25 ~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (598)
T 3qf4_B 25 LRRLLGYLRPHT--FTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIML 102 (598)
T ss_dssp HHHHGGGTGGGH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999--999999999999999999999999999999973688899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998843885221235602479999625768544657999999999999999999999875779999
Q 000438 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1510)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 1092 (1510)
..+.+...+++.++++++++.|++||+++++|+++||+++|++.++..+...+..++...+.+++.+++++..+|.+.++
T Consensus 103 ~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~ 182 (598)
T 3qf4_B 103 TLSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLV 182 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999977999997688889999999999999999999999999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999763212699999852116999871738899999999999776459999857669
Q 000438 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1510)
Q Consensus 1093 ~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1510)
++..+++++.+..++.+..++..+......+...+++.|+++|+.+||+|+.|+.+.+++.+..+...+..........+
T Consensus 183 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (598)
T 3qf4_B 183 TLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGV 262 (598)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999997379999974870999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9999999999999999999-998606765866999999999999999999999999999996899999984038511111
Q 000438 1173 LGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1510)
Q Consensus 1173 l~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~ 1251 (1510)
.....+++..+...+...+ ...+..+.+++|.+...+.|...+...+..+...+..++..+.+++|+.++.+.|+|...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 342 (598)
T 3qf4_B 263 LPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDD 342 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999985997899999999999999999999999999999999999999999768877777
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 13589999999997308999778784699994033225998489299999799997889999984056899738999596
Q 000438 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI 1331 (1510)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~isl~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1331 (1510)
..+.+.++..|.|+++|++++|+++ .++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||.
T Consensus 343 ----~~~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~ 417 (598)
T 3qf4_B 343 ----PDAVELREVRGEIEFKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGI 417 (598)
T ss_dssp ----SSCCCCCSCCCCEEEEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTE
T ss_pred ----CCCCCCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCE
T ss_conf ----7777777777718999989977999-86012227998699889998999996999999994585799808999999
Q ss_pred ECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 379999777610207864766657554777038899-9999999999998395389972858752100189998890599
Q 000438 1332 DISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQR 1410 (1510)
Q Consensus 1332 dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQr 1410 (1510)
|+.+++.+++|++++++||||.+|++|+|+|+.... ..++++++++++.++++++++.+|+|+||.++|+|.+||||||
T Consensus 418 ~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~ 497 (598)
T 3qf4_B 418 DIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQR 497 (598)
T ss_dssp EGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHH
T ss_pred EHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHH
T ss_conf 83018899998410899079823246399997447999999999999999697888974645323642278898799999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHH
Q ss_conf 99999999825997999827999999885999999999882793699980390345301979999597798955915782
Q 000438 1411 QLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRLL 1490 (1510)
Q Consensus 1411 Qrl~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ti~~~DrIlVl~~G~ivE~gsp~~Ll 1490 (1510)
||+|||||++++|+||+||||||++|++++..|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+
T Consensus 498 Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~ 577 (598)
T 3qf4_B 498 QLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELI 577 (598)
T ss_dssp HHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHH
T ss_conf 99999999964999999989766799999999999999980899899994277899719989999899999877899998
Q ss_pred CCCCHHHHHHHHHHH
Q ss_conf 099289999999964
Q 000438 1491 ERPSLFGALVQEYAN 1505 (1510)
Q Consensus 1491 ~~~~~f~~l~~~~~~ 1505 (1510)
++++.|++++.+...
T Consensus 578 ~~~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 578 QKRGFYYELFTSQYG 592 (598)
T ss_dssp HTTCHHHHHHHHHHG
T ss_pred HCCCHHHHHHHHHHH
T ss_conf 678779999999764
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=698.81 Aligned_cols=564 Identities=21% Similarity=0.256 Sum_probs=460.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999997234599999999999999986543424110245577788891---2779999999899999999999999
Q 000438 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMSFNP---SLFIGVYGSTAVLSMVILVVRAYFV 1011 (1510)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~---~~~~~vy~~l~~~~~~~~~~~~~~~ 1011 (1510)
++.++.|++...+ .+.+.+++.++..++.+..++++..+.+.... ..+. ..+...+.++.++..++.+++.++.
T Consensus 11 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (587)
T 3qf4_A 11 SKTLARYLKPYWI--FAVLAPLFMVVEVICDLSQPTLLARIVDEGIA-RGDFSLVLKTGILMLIVALIGAVGGIGCTVFA 87 (587)
T ss_dssp CCCGGGGTGGGHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999--99999999999999999999999999999873-69879999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999884388522123560247999962576854465799999999999999999999987577999
Q 000438 1012 THVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIF 1091 (1510)
Q Consensus 1012 ~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 1091 (1510)
.+.+.+...+++.++++++++.|++||+++++|+++||+++|++.++..+...+..++...+.+++.+++++..+|.+.+
T Consensus 88 ~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 167 (587)
T 3qf4_A 88 SYASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKLSS 167 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999997889799765888999999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999976321269999985211699987173889999999999977645999985766
Q 000438 1092 LVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNE 1171 (1510)
Q Consensus 1092 ~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1171 (1510)
+++..+++...+..++.+..+...+......+...+++.|+++|+.+||+|+.|+.+.+++.+..+...+..........
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (587)
T 3qf4_A 168 VLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSLIV 247 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999855999998621499999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999999-99860676586699999999999999999999999999999689999998403851111
Q 000438 1172 WLGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAA 1250 (1510)
Q Consensus 1172 wl~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~ 1250 (1510)
+......++..+.......+ ...+..+.++.|.+...+.|...+...+..+......+.....+.+|+.++.+.+++.+
T Consensus 248 ~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 327 (587)
T 3qf4_A 248 FALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPAIE 327 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999998499389999999999999999999999999999999999999999976897657
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 11358999999999730899977878469999403322599848929999979999788999998405689973899959
Q 000438 1251 WKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDG 1330 (1510)
Q Consensus 1251 ~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~isl~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG 1330 (1510)
.. ..+.+.++..|.|+++|++++|+++.+++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||
T Consensus 328 ~~---~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g 404 (587)
T 3qf4_A 328 EA---DNALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDE 404 (587)
T ss_dssp CC---TTCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESS
T ss_pred CC---CCCCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC
T ss_conf 88---776566888880799788998489997642111799869988999899999799999999278669986798999
Q ss_pred EECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 6379999777610207864766657554777038899-999999999999839538997285875210018999889059
Q 000438 1331 IDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG-QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1331 ~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~-~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1510)
.|+++++.+++|++++++||||.+|++|+|+|+.... ..++++++++++.+++++++..+|+|+|+.++|+|.+|||||
T Consensus 405 ~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGq 484 (587)
T 3qf4_A 405 LDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQ 484 (587)
T ss_dssp SBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHH
T ss_pred EECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHH
T ss_conf 98340789999841389778986767559999852488999999999999968499997565312127518989929999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999982599799982799999988599999999988279369998039034530197999959779895591578
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ti~~~DrIlVl~~G~ivE~gsp~~L 1489 (1510)
|||++||||++++|+||+||||||++|++++..|++.|++..+++|+|+||||++++..||||++|++|+++|.|+|++|
T Consensus 485 rQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el 564 (587)
T 3qf4_A 485 KQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKEL 564 (587)
T ss_dssp HHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997299999997975447999999999999986799989998227688981998999989989997889999
Q ss_pred HCCCCHHHHHHHHHH
Q ss_conf 209928999999996
Q 000438 1490 LERPSLFGALVQEYA 1504 (1510)
Q Consensus 1490 l~~~~~f~~l~~~~~ 1504 (1510)
+++++.|++++++..
T Consensus 565 ~~~~~~~~~~~~~~~ 579 (587)
T 3qf4_A 565 LEHCKPYREIYESQF 579 (587)
T ss_dssp HHHCHHHHHHHHHHC
T ss_pred HHCCCHHHHHHHHHH
T ss_conf 867839999999984
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=678.64 Aligned_cols=561 Identities=20% Similarity=0.246 Sum_probs=453.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCC--C------HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999972345999999999999999865434241102455777-8889--1------277999999989999999999
Q 000438 937 VYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHS-MSFN--P------SLFIGVYGSTAVLSMVILVVR 1007 (1510)
Q Consensus 937 ~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~-~~~~--~------~~~~~vy~~l~~~~~~~~~~~ 1007 (1510)
.++.|++..++.. .+.+++.++..+..+..++.+.+..+.... .... . ..+..++.++.++..++.+.+
T Consensus 4 ~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (578)
T 4a82_A 4 RYLQFVKPYKYRI--FATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIR 81 (578)
T ss_dssp HHHHHHGGGHHHH--HHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999988999999--99999999999999999999999999998168711467788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999988438852212356024799996257685446579999999999999999999998757
Q 000438 1008 AYFVTHVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAW 1087 (1510)
Q Consensus 1008 ~~~~~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~i~~~~~~~~~~~~~~~~~~~i~~~~~~ 1087 (1510)
.+...+.+.+....++.++++++++.|++||+++++|++++|+++|++.++..+...+..++...+.+++.+++++..+|
T Consensus 82 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 161 (578)
T 4a82_A 82 QYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDV 161 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999878999976898699999999999999999999999999999999999999999969
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 79999999999999999999999999999997632126999998521169998717388999999999997764599998
Q 000438 1088 PTIFLVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNN 1167 (1510)
Q Consensus 1088 ~~~~~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~ 1167 (1510)
.+.++.+...+++..+..++.+..++..+......++..+++.|+++|+.+||+|+.|+.+.+++.+..+...+......
T Consensus 162 ~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 241 (578)
T 4a82_A 162 KLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHT 241 (578)
T ss_dssp TTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999982499999816649999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 576699999999999999999999-9986067658669999999999999999999999999999968999999840385
Q 000438 1168 GSNEWLGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIP 1246 (1510)
Q Consensus 1168 ~~~~wl~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~ 1246 (1510)
....+......++..+...++..+ ...+..+.+++|.+...+.|...+..++..+......++....+.+|+.++.+.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~ 321 (578)
T 4a82_A 242 RWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDED 321 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999859958999999999999999999999999999999999999999997689
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 11111135899999999973089997787846999940332259984892999997999978899999840568997389
Q 000438 1247 SEAAWKMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRI 1326 (1510)
Q Consensus 1247 ~E~~~~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~isl~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I 1326 (1510)
+|.+. ...+.+.++..|.|+++|++++|+++.+++|+|+||++++||++||||+||||||||+++|.|+++|++|+|
T Consensus 322 ~~~~~---~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i 398 (578)
T 4a82_A 322 YDIKN---GVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQI 398 (578)
T ss_dssp CSSCC---CTTCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEE
T ss_pred CCCCC---CCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
T ss_conf 76667---877666677788079999999758999741343379987999999989999859999999846788999679
Q ss_pred EECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCC-CCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 9959637999977761020786476665755477703889-999999999999983953899728587521001899988
Q 000438 1327 IIDGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPI-GQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNW 1405 (1510)
Q Consensus 1327 ~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~-~~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nL 1405 (1510)
.+||.|+++++.+++|++++++||+|.+|++|+++|+... ...++++++++++.+++++++..+|+|+||.++|+|.+|
T Consensus 399 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~L 478 (578)
T 4a82_A 399 LIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKL 478 (578)
T ss_dssp EETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTS
T ss_pred EECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCC
T ss_conf 99999844278999960068992898347645999985279998899999999880959999757330102530688967
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
Q ss_conf 90599999999998259979998279999998859999999998827936999803903453019799995977989559
Q 000438 1406 SVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGK 1485 (1510)
Q Consensus 1406 SgGQrQrl~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ti~~~DrIlVl~~G~ivE~gs 1485 (1510)
|||||||++||||++++|+|++||||||++|++++..+++.+++..+++|+|+||||++++..||+|++|++|+++|.|+
T Consensus 479 SgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 558 (578)
T 4a82_A 479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGT 558 (578)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECC
T ss_conf 99999999999999749999999786545799999999999999808997999831789997199899998998999888
Q ss_pred HHHHHCCCCHHHHHHHH
Q ss_conf 15782099289999999
Q 000438 1486 PSRLLERPSLFGALVQE 1502 (1510)
Q Consensus 1486 p~~Ll~~~~~f~~l~~~ 1502 (1510)
|++|+++++.|+++++.
T Consensus 559 ~~el~~~~~~~~~~~~~ 575 (578)
T 4a82_A 559 HRELIAKQGAYEHLYSI 575 (578)
T ss_dssp HHHHHHTTSHHHHHHTT
T ss_pred HHHHHHCCCHHHHHHHH
T ss_conf 99998588389999985
No 8
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=677.41 Aligned_cols=562 Identities=20% Similarity=0.260 Sum_probs=474.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CCCHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999997234599999999999999986543424110245577788-891277-99999998999999999999999
Q 000438 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHSMS-FNPSLF-IGVYGSTAVLSMVILVVRAYFVT 1012 (1510)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~-~~~~~~-~~vy~~l~~~~~~~~~~~~~~~~ 1012 (1510)
++.++.|++..+. .+.+.+++.++..+.....++++.++.+...... .....+ ...+.++.++..++.+.+.+...
T Consensus 13 ~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (582)
T 3b60_A 13 FRRLWPTIAPFKA--GLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCIS 90 (582)
T ss_dssp HHHHHHHHGGGHH--HHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999--99999999999999999999999999998843686579999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998843885221235602479999625768544657999999999999999999999875779999
Q 000438 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1510)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 1092 (1510)
..+.+....++.++++++++.|++||+++++|++++|+++|++.++..+...+..++...+.+++.+++++.++|.+.++
T Consensus 91 ~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 170 (582)
T 3b60_A 91 WVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSII 170 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999980999997889865899999987999999999999999999999999999999980999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999763212699999852116999871738899999999999776459999857669
Q 000438 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1510)
Q Consensus 1093 ~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1510)
++..+++++.+..++.+..++..+......++..+++.|+++|+.+||+|+.++.+.+++.+..+...+..........|
T Consensus 171 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3b60_A 171 LVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSI 250 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999619999983768999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 999999999999999999999-8606765866999999999999999999999999999996899999984038511111
Q 000438 1173 LGFRLELLGSFTFCLATLFMI-LLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1510)
Q Consensus 1173 l~~~l~~l~~~~~~~~~~~~v-~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~ 1251 (1510)
.....+++..+...+...+.. .+..+.++.|.+...+.|...+..++..+...+..++....+++|+.++.+.|+|.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 330 (582)
T 3b60_A 251 SDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDE 330 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999984999899999999999999999999999999999999999999999759987667
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 13589999999997308999778784699994033225998489299999799997889999984056899738999596
Q 000438 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI 1331 (1510)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~isl~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1331 (1510)
. +.+.++..+.|+++|++++|+++..++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||.
T Consensus 331 ---~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b60_A 331 ---G--KRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGH 405 (582)
T ss_dssp ---C--CBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTE
T ss_pred ---C--CCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCE
T ss_conf ---7--77777888847999889973999974415615997699989998999998999999986106898976979999
Q ss_pred ECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 379999777610207864766657554777038899--999999999999839538997285875210018999889059
Q 000438 1332 DISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1332 dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~--~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1510)
|+++++.+++|++++++||+|.+|++|+++|+.... +.+++++++++++++++++++++|+||||.++|+|.+|||||
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq 485 (582)
T 3b60_A 406 DLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQ 485 (582)
T ss_dssp ETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHH
T ss_pred ECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf 82306999999608088068747787899998545999989999999999849799998450411451147988789999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999982599799982799999988599999999988279369998039034530197999959779895591578
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ti~~~DrIlVl~~G~ivE~gsp~~L 1489 (1510)
|||++||||++++|+||+||||||++|++++..+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 486 ~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 565 (582)
T 3b60_A 486 RQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSEL 565 (582)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997289989997865557989999999999999679979999454778985998999978889884589999
Q ss_pred HCCCCHHHHHHHHH
Q ss_conf 20992899999999
Q 000438 1490 LERPSLFGALVQEY 1503 (1510)
Q Consensus 1490 l~~~~~f~~l~~~~ 1503 (1510)
+++++.|+++++..
T Consensus 566 ~~~~~~~~~~~~~q 579 (582)
T 3b60_A 566 LAQHGVYAQLHKMQ 579 (582)
T ss_dssp HHHTSSHHHHHHHT
T ss_pred HHCCCHHHHHHHHH
T ss_conf 87698899999975
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=675.59 Aligned_cols=562 Identities=20% Similarity=0.276 Sum_probs=474.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999972345999999999999999865434241102455777-888912779-9999998999999999999999
Q 000438 935 LHVYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHS-MSFNPSLFI-GVYGSTAVLSMVILVVRAYFVT 1012 (1510)
Q Consensus 935 ~~~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~-~~~~~~~~~-~vy~~l~~~~~~~~~~~~~~~~ 1012 (1510)
++.++.|++...+. +.+.+++.++..+.....++++.++.+.... .......++ ..+.++.++..++.+.+.+...
T Consensus 13 ~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (582)
T 3b5x_A 13 FKRLWTYIRLYKAG--LVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCLS 90 (582)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998899999--9999999999999999999999999999864686679999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998843885221235602479999625768544657999999999999999999999875779999
Q 000438 1013 HVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIFL 1092 (1510)
Q Consensus 1013 ~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 1092 (1510)
..+.+....++.++++++++.|++||+++++|++++|+++|++.++..+...+..++...+.+++.+++++.++|.+.++
T Consensus 91 ~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 170 (582)
T 3b5x_A 91 WVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLV 170 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999986999997789878999999988999999999999999999999999999999982999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999763212699999852116999871738899999999999776459999857669
Q 000438 1093 VIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNEW 1172 (1510)
Q Consensus 1093 ~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~w 1172 (1510)
++..+++++.+..++.+..++..+......+...+++.|+++|+.+||+|+.|+.+.+++.+..+...+..........|
T Consensus 171 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3b5x_A 171 LIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSI 250 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999519999970875999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9999999999999999999-998606765866999999999999999999999999999996899999984038511111
Q 000438 1173 LGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAAW 1251 (1510)
Q Consensus 1173 l~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~~ 1251 (1510)
.....+++..+...++.++ ...+..+.++.|.+...+.|...+..++..+......++....+.+|+.++.+.++|.+.
T Consensus 251 ~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 330 (582)
T 3b5x_A 251 ADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERDN 330 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999985998899999999999999999999999999999999999999999758976777
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 13589999999997308999778784699994033225998489299999799997889999984056899738999596
Q 000438 1252 KMEDRLPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIIIDGI 1331 (1510)
Q Consensus 1252 ~~~~~~~~~~wp~~g~I~~~nvs~~Y~~~~~~vL~~isl~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1331 (1510)
. +.+.++..+.|+++|++++|+++..++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||.
T Consensus 331 ---~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b5x_A 331 ---G--KYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGH 405 (582)
T ss_pred ---C--CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
T ss_conf ---7--77777788828999989972899865400416998799989998999997999999996577899987989999
Q ss_pred ECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 379999777610207864766657554777038899--999999999999839538997285875210018999889059
Q 000438 1332 DISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQ 1409 (1510)
Q Consensus 1332 dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~--~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nLSgGQ 1409 (1510)
|+.+++.+++|++++++||+|.+|++|+++|+.... +.++++++++++.++++++++++|+|+||.++|+|.+|||||
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq 485 (582)
T 3b5x_A 406 DVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQ 485 (582)
T ss_pred EHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHH
T ss_conf 85638899996485898279905310299998566889999999999999879899998476533451068888479999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999982599799982799999988599999999988279369998039034530197999959779895591578
Q 000438 1410 RQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFGKPSRL 1489 (1510)
Q Consensus 1410 rQrl~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ti~~~DrIlVl~~G~ivE~gsp~~L 1489 (1510)
|||++||||++++|+||+||||||++|++++..+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|
T Consensus 486 ~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 565 (582)
T 3b5x_A 486 RQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADL 565 (582)
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997499999997854468999999999999997289989999368899981998999989989997789999
Q ss_pred HCCCCHHHHHHHHH
Q ss_conf 20992899999999
Q 000438 1490 LERPSLFGALVQEY 1503 (1510)
Q Consensus 1490 l~~~~~f~~l~~~~ 1503 (1510)
+++++.|+++++..
T Consensus 566 ~~~~~~~~~~~~~q 579 (582)
T 3b5x_A 566 LAQDGAYAQLHRIQ 579 (582)
T ss_pred HHCCCHHHHHHHHH
T ss_conf 84885899999986
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=666.79 Aligned_cols=564 Identities=20% Similarity=0.258 Sum_probs=460.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCC----CHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999972345999999999999999865434241102455777-8889----12779999999899999999999999
Q 000438 937 VYKIYCTEAYGWWGVVAVLLLSVAWQGSLMAGDYWLSYETSEDHS-MSFN----PSLFIGVYGSTAVLSMVILVVRAYFV 1011 (1510)
Q Consensus 937 ~y~~y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~-~~~~----~~~~~~vy~~l~~~~~~~~~~~~~~~ 1011 (1510)
.++.|++...+ .+.+.+++.++..+.....++++....+.... .... ...+..++.++.++..++.+.+.+..
T Consensus 9 ~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (595)
T 2yl4_A 9 KLLGLAYPERR--RLAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLM 86 (595)
T ss_dssp HHHHHHGGGHH--HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999887899--9999999999999999999999999999997357402667999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999884388522123560247999962576854465799999999999999999999987577999
Q 000438 1012 THVGLKTAQIFFSQILRSILHAPMSFFDTTPSGRILSRASTDQTNIDLFLPFFVGITVAMYITLLGIFIITCQYAWPTIF 1091 (1510)
Q Consensus 1012 ~~~~~~~s~~l~~~ll~~il~~p~~ffd~~p~G~ilnR~s~D~~~id~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 1091 (1510)
...+.+....++.++++++++.|++||+++++|++++|+++|++.++..+...+..++...+.+++.+++++.++|.+.+
T Consensus 87 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 166 (595)
T 2yl4_A 87 QTSGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLAT 166 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998199999777984889999999999999999999999999999999999999998199999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999976321269999985211699987173889999999999977645999985766
Q 000438 1092 LVIPLAWANYWYRGYYLSTSRELTRLDSITKAPVIHHFSESISGVMTIRAFGKQTTFYQENVNRVNGNLRMDFHNNGSNE 1171 (1510)
Q Consensus 1092 ~~ipl~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIraf~~~~~f~~~~~~~~d~~~~~~~~~~~~~~ 1171 (1510)
+++..+++...+..++.+..++..+......+...+++.|+++|+.+||+|+.++++.+++.+..+...+..........
T Consensus 167 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (595)
T 2yl4_A 167 FVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARA 246 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999811999998375699999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999999-99860676586699999999999999999999999999999689999998403851111
Q 000438 1172 WLGFRLELLGSFTFCLATLF-MILLPSSIIKPENVGLSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTEIPSEAA 1250 (1510)
Q Consensus 1172 wl~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~g~~gl~l~y~l~l~~~l~~~v~~~~~le~~~~sveRi~~~~~~~~E~~ 1250 (1510)
|......++..+.......+ ...+..+.++.|.+...+.|...+..++..+......++....+++|+.++.+.++|.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 326 (595)
T 2yl4_A 247 GFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLP 326 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999998699789999999999999999999999999999999999999999983897667
Q ss_pred CCCCCCCCCCCCCCCCE-EEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 11358999999999730-8999778784699-994033225998489299999799997889999984056899738999
Q 000438 1251 WKMEDRLPPPNWPAHGN-VDLIDLQVRYRSN-TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGRIII 1328 (1510)
Q Consensus 1251 ~~~~~~~~~~~wp~~g~-I~~~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~I 1328 (1510)
.. ...+ +..+..+. |+++|++++|+++ ..++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+
T Consensus 327 ~~--~~~~-~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~ 403 (595)
T 2yl4_A 327 FN--EGVI-LNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISL 403 (595)
T ss_dssp SS--CSBC-CCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEE
T ss_pred CC--CCCC-CCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 77--7877-77678998389998899858998881201127998499889998999997999999982585789837999
Q ss_pred CCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC----CCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 596379999777610207864766657554777038899----9999999999998395389972858752100189998
Q 000438 1329 DGIDISLLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPIG----QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDN 1404 (1510)
Q Consensus 1329 DG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~----~~sd~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1404 (1510)
||.|+.+++.+++|++++++||+|.+|++|+++|+.... +.++++++++++.++++++++++|+|+|+.++|+|.+
T Consensus 404 ~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~ 483 (595)
T 2yl4_A 404 DGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVL 483 (595)
T ss_dssp TTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCC
T ss_pred CCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99981117999997322898368832687799998405877665689999999998697999974732013501688786
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEEC
Q ss_conf 89059999999999825997999827999999885999999999882793699980390345301979999597798955
Q 000438 1405 WSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREEFAACTIISIAHRIPTVMDCDRVIVVDAGWAKEFG 1484 (1510)
Q Consensus 1405 LSgGQrQrl~LARALLr~~~ILiLDEaTsslD~~te~~Iq~~I~~~~~~~TvI~IAHRl~ti~~~DrIlVl~~G~ivE~g 1484 (1510)
||||||||++||||++++|+||+||||||++|++++..+++.|++..+++|+|+||||++++..||+|++|++|+++|.|
T Consensus 484 LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 563 (595)
T 2yl4_A 484 LSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYG 563 (595)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 89999999999999975999999988666899899999999999996599799994687899759989999899899978
Q ss_pred CHHHHHCC-CCHHHHHHHHHHH
Q ss_conf 91578209-9289999999964
Q 000438 1485 KPSRLLER-PSLFGALVQEYAN 1505 (1510)
Q Consensus 1485 sp~~Ll~~-~~~f~~l~~~~~~ 1505 (1510)
+|++|+++ ++.|+++++....
T Consensus 564 ~~~~l~~~~~~~~~~~~~~q~~ 585 (595)
T 2yl4_A 564 KHEELLSKPNGIYRKLMNKQSF 585 (595)
T ss_dssp CSCC------C-----------
T ss_pred CHHHHHHCCCHHHHHHHHHHHC
T ss_conf 8999974787299999997430
Done!