BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000441
(1508 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NTI5|PDS5B_HUMAN Sister chromatid cohesion protein PDS5 homolog B OS=Homo sapiens
GN=PDS5B PE=1 SV=1
Length = 1447
Score = 183 bits (465), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 211/923 (22%), Positives = 402/923 (43%), Gaps = 63/923 (6%)
Query: 1 MQTIMIVLLEESEDIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQF 57
M +M ++ E + + ++LL +L L +N N A LA ++++ A +E I F
Sbjct: 177 MVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNF 236
Query: 58 LVSS-MSGDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLV 116
M G + ++I ++Y +L V+P L +L ++ + RL+ V L+
Sbjct: 237 FNQVLMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLL 296
Query: 117 GDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTA 176
+F S Q ++ +L R D V +R+ ++ CL+ P A +
Sbjct: 297 AKMFGAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAK--DLTEY 354
Query: 177 LCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLAD 236
L R D +E +R V+ I A + + + V ER DK V++ M LA
Sbjct: 355 LKVRSHDPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQ 414
Query: 237 IFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRV 295
I++ L++ G + WI K+L Y +E + + P +R+
Sbjct: 415 IYKKYALQSAAGKDAAKQIAWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERM 474
Query: 296 RHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFR 354
+ +++ D +KAL ++ + + L+ +++ L L +Q D I K++
Sbjct: 475 KCLYYLYATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM---- 530
Query: 355 VMSRSFAEPAKAEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-A 411
V++R+ +P KA++ Q+ D + K L L+ S QA ++ K LG
Sbjct: 531 VITRNLPDPGKAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLGNP 590
Query: 412 KHRLYDFLSTLSM---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCM 459
K FL + + + + + E + ++ +V + Q +++ +
Sbjct: 591 KQPTNPFLEMIKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGL 650
Query: 460 DILGILARFSPLLLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSV 517
++L +L+ P+ E E L+ LK ++E + E L + G I E S++
Sbjct: 651 ELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSAL 710
Query: 518 DLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQS 575
+L +G RQAKYA+H + AI + + +++ L L+ HL L +
Sbjct: 711 LPVLHHKSKKGPPRQAKYAIHCIHAIFSSKETQ-FAQIFEPLHKSLDPSNLEHLITPLVT 769
Query: 576 LGCIAQTAMPVFETR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGI 631
+G IA A F +S + FI +L T W ++ S ++KI I
Sbjct: 770 IGHIALLAPDQFAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAI 829
Query: 632 KTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRL 691
K +V+ L +K+ H + G L + + S G+++E + S D + LRLA+ A+++L
Sbjct: 830 KMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKL 889
Query: 692 SRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLFGI 747
+++ + I ++ + L Q +++F K+H+ + L +Y CA
Sbjct: 890 AQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALC--- 946
Query: 748 TESKSPEFEEE---KQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHH 804
+K P E +Q L I + + + +V S PEY++PY +H AH
Sbjct: 947 --AKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEKLLSL--LPEYVVPYTIHLLAHD 1002
Query: 805 SCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSED 864
PD + +D++ + V L+F++ +L+ K+E+ S + I + +IK ++D
Sbjct: 1003 --PDYVKVQDIEQLKDVKECLWFVLEILMAKNEN--------NSHAFIRKMVENIKQTKD 1052
Query: 865 IV---DAAKSKNSHAICDLGLSI 884
DA ++ + +CD+ ++I
Sbjct: 1053 AQGPDDAKMNEKLYTVCDVAMNI 1075
>sp|Q5F3U9|PDS5B_CHICK Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus
GN=PDS5B PE=2 SV=3
Length = 1412
Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 212/924 (22%), Positives = 403/924 (43%), Gaps = 65/924 (7%)
Query: 1 MQTIMIVLLEESEDIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQF 57
M +M ++ E + + ++LL +L L +N N A LA ++++ A +E I F
Sbjct: 177 MVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNF 236
Query: 58 LVSS-MSGDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLV 116
M G + ++I ++Y +L V+P L +L ++ + RL+ V L+
Sbjct: 237 FNQVLMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLL 296
Query: 117 GDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILT 175
+F S Q ++ +L R D V +R+ ++ CL+ P A D + L
Sbjct: 297 AKMFGAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLK 356
Query: 176 ALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLA 235
R D +E +R V+ I A L + + V ER DK V++ M LA
Sbjct: 357 V---RSHDPEEAIRHDVIVSIVTAAKKDLLLVNDHLLNFVRERTLDKRWRVRKEAMMGLA 413
Query: 236 DIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDR 294
I++ L++ G + WI K+L Y +E + + P +R
Sbjct: 414 QIYKKYSLQSEAGKEAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETNER 473
Query: 295 VRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCF 353
++ +++ D +KAL ++ + + L+ +++ + L +Q D + I K++
Sbjct: 474 MKCLYYLYATLDSNAVKALNEMWKCQNLLRHQVKDLVDLIKQPKTDASSKAIFSKVM--- 530
Query: 354 RVMSRSFAEPAKAEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG- 410
V++R+ +P KA++ Q+ D + L L+ S QA ++ K LG
Sbjct: 531 -VITRNLPDPGKAQDFMKKFTQVLEDDEKIRSQLEMLVSPTCSCKQAEGCVREITKKLGN 589
Query: 411 AKHRLYDFLSTLSM---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSC 458
K FL + + + + + E + ++ +V + Q +++
Sbjct: 590 PKQPTNPFLEMIKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAG 649
Query: 459 MDILGILARFSPLLLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSS 516
+++L +L+ P+ E E L+ LK ++E + E L + G I E S+
Sbjct: 650 LELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSA 709
Query: 517 VDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQ 574
+ +L +G RQAKYA+H + AI + + +++ L L+ HL L
Sbjct: 710 LLPVLHHKAKKGPPRQAKYAIHCINAIFSSKETQ-FAQIFEPLHKSLDPSNFEHLITPLV 768
Query: 575 SLGCIAQTAMPVFETR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYG 630
++G IA A F +S + FI +L T W ++ S L+KI
Sbjct: 769 TIGHIAMLAPDQFAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETLVKIQA 828
Query: 631 IKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLR 690
IK +V+ L +K+ H + G L + + S G+++E + S D + LRLA+ A+++
Sbjct: 829 IKMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVK 888
Query: 691 LSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLFG 746
L+++ + I ++ + L Q +++F K+H+ + L +Y CA
Sbjct: 889 LAQEPCYHEIITLEQYQLCALAINDECYQVRQIFAQKLHKGLSRLRLPLEYMAICALC-- 946
Query: 747 ITESKSPEFEEE---KQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAH 803
+K P E +Q L I + + + +V S PEY++PY +H AH
Sbjct: 947 ---AKDPVKERRAHARQCLVKNINVRREYLKQHAAVSEKLLSL--LPEYVVPYTIHLLAH 1001
Query: 804 HSCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSE 863
PD + +D++ + + L+FI+ +L+ K+E+ S + I + +IK ++
Sbjct: 1002 D--PDYVKVQDIEQLKDIKECLWFILEILMAKNEN--------NSHAFIRKMVENIKQTK 1051
Query: 864 DIV---DAAKSKNSHAICDLGLSI 884
D DA ++ + +CD+ ++I
Sbjct: 1052 DAQGPDDAKMNEKLYTVCDVAMNI 1075
>sp|Q4VA53|PDS5B_MOUSE Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus
GN=Pds5b PE=1 SV=1
Length = 1446
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 209/923 (22%), Positives = 401/923 (43%), Gaps = 63/923 (6%)
Query: 1 MQTIMIVLLEESEDIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQF 57
M +M ++ E + + ++LL +L L +N N A LA ++++ A +E I F
Sbjct: 177 MVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNF 236
Query: 58 LVSS-MSGDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLV 116
M G + ++I ++Y +L V+P L +L ++ + RL+ V L+
Sbjct: 237 FNQVLMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLL 296
Query: 117 GDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTA 176
+F S Q ++ +L R D V +R+ ++ CL+ P A +
Sbjct: 297 AKMFGAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAK--DLTEY 354
Query: 177 LCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLAD 236
L R D +E +R V+ I A + + + V ER DK V++ M LA
Sbjct: 355 LKVRSHDPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQ 414
Query: 237 IFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRV 295
I++ L++ G + W+ K+L Y +E + + P +R+
Sbjct: 415 IYKKYSLQSAAGKDAAKQISWVKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERM 474
Query: 296 RHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFR 354
+ +++ D +KAL ++ + + L+ +++ L L +Q D I K++
Sbjct: 475 KCLYYLYATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM---- 530
Query: 355 VMSRSFAEPAKAEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-A 411
V++R+ +P KA++ Q+ D + K L L+ S QA ++ K LG
Sbjct: 531 VITRNLPDPGKAQDFMKKFTQVLEDDEKIRKQLEALVSPTCSCKQAEGCVREITKKLGNP 590
Query: 412 KHRLYDFLSTLSM---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCM 459
K FL + + + + + E + ++ +V + Q +++ +
Sbjct: 591 KQPTNPFLEMIKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGL 650
Query: 460 DILGILARFSPLLLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSV 517
++L +L+ P+ E E L+ LK ++E + E L + G I E S++
Sbjct: 651 ELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSAL 710
Query: 518 DLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQS 575
+L +G RQAKYA+H + AI + + +++ L L+ HL L +
Sbjct: 711 LPVLHHKSKKGPPRQAKYAIHCIHAIFSSKETQ-FAQIFEPLHKSLDPSNLEHLITPLVT 769
Query: 576 LGCIAQTAMPVFETR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGI 631
+G IA A F +S + FI +L T W ++ S ++KI I
Sbjct: 770 IGHIALLAPDQFAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAI 829
Query: 632 KTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRL 691
K +V+ L +K+ H + G L + + S G+++E + S D + LRLA+ A+++L
Sbjct: 830 KMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKL 889
Query: 692 SRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLFGI 747
+++ + I ++ + L Q +++F K+H+ + L +Y CA
Sbjct: 890 AQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALC--- 946
Query: 748 TESKSPEFEEE---KQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHH 804
+K P E +Q L I + + + +V S PEY++PY +H AH
Sbjct: 947 --AKDPVKERRAHARQCLVKNITVRREYLKQHAAVSEKLLSL--LPEYVVPYTIHLLAHD 1002
Query: 805 SCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSED 864
PD + +D++ + V L+F++ +L+ K+E+ S + I + +IK ++D
Sbjct: 1003 --PDYVKVQDIEQLKDVKECLWFVLEILMAKNEN--------NSHAFIRKMVENIKQTKD 1052
Query: 865 IV---DAAKSKNSHAICDLGLSI 884
D ++ + +CD+ ++I
Sbjct: 1053 AQGPDDTKMNEKLYTVCDVAMNI 1075
>sp|Q6TRW4|PDS5B_RAT Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus
GN=Pds5b PE=2 SV=2
Length = 1447
Score = 180 bits (457), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 209/923 (22%), Positives = 401/923 (43%), Gaps = 63/923 (6%)
Query: 1 MQTIMIVLLEESEDIQEDLLVILLSAL---GRNKNDTARRLAMNVIEQCAGKLEAGIKQF 57
M +M ++ E + + ++LL +L L +N N A LA ++++ A +E I F
Sbjct: 177 MVDLMSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNF 236
Query: 58 LVSS-MSGDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLV 116
M G + ++I ++Y +L V+P L +L ++ + RL+ V L+
Sbjct: 237 FNQVLMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLL 296
Query: 117 GDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTA 176
+F S Q ++ +L R D V +R+ ++ CL+ P A +
Sbjct: 297 AKMFGAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAK--DLTEY 354
Query: 177 LCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLAD 236
L R D +E +R V+ I A + + + V ER DK V++ M LA
Sbjct: 355 LKVRSHDPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQ 414
Query: 237 IFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRV 295
I++ L++ G + W+ K+L Y +E + + P +R+
Sbjct: 415 IYKKYALQSAAGKDAAKQICWVKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERM 474
Query: 296 RHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFR 354
+ +++ D +KAL ++ + + L+ +++ L L +Q D I K++
Sbjct: 475 KCLYYLYATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVM---- 530
Query: 355 VMSRSFAEPAKAEENFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-A 411
V++R+ +P KA++ Q+ D + K L L+ S QA ++ K LG
Sbjct: 531 VITRNLPDPGKAQDFMKKFTQVLEDDEKIRKQLEALVSPTCSCKQAEGCVREITKKLGNP 590
Query: 412 KHRLYDFLSTLSM---KCSYLLFNKEHVKEILLEVAAQ---------KSSANAQFMQSCM 459
K FL + + + + + E + ++ +V + Q +++ +
Sbjct: 591 KQPTNPFLEMIKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGL 650
Query: 460 DILGILARFSPLLLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSV 517
++L +L+ P+ E E L+ LK ++E + E L + G I E S++
Sbjct: 651 ELLKVLSFTHPISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSAL 710
Query: 518 DLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQS 575
+L +G RQAKYA+H + AI + + +++ L L+ HL L +
Sbjct: 711 LPVLHHKSKKGPPRQAKYAIHCIHAIFSSKETQ-FAQIFEPLHKSLDPSNLEHLITPLVT 769
Query: 576 LGCIAQTAMPVFETR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGI 631
+G IA A F +S + FI +L T W ++ S ++KI I
Sbjct: 770 IGHIALLAPDQFAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAI 829
Query: 632 KTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRL 691
K +V+ L +K+ H + G L + + S G+++E + S D + LRLA+ A+++L
Sbjct: 830 KMMVRWLLGMKNNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKL 889
Query: 692 SRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLFGI 747
+++ + I ++ + L Q +++F K+H+ + L +Y CA
Sbjct: 890 AQEPCYHEIITLEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALC--- 946
Query: 748 TESKSPEFEEE---KQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHH 804
+K P E +Q L I + + + +V S PEY++PY +H AH
Sbjct: 947 --AKDPVKERRAHARQCLVKNITVRREYLKQHAAVSEKLLSL--LPEYVVPYTIHLLAHD 1002
Query: 805 SCPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSED 864
PD + +D++ + V L+F++ +L+ K+E+ S + I + +IK ++D
Sbjct: 1003 --PDYVKVQDIEQLKDVKECLWFVLEILMAKNEN--------NSHAFIRKMVENIKQTKD 1052
Query: 865 IV---DAAKSKNSHAICDLGLSI 884
D ++ + +CD+ ++I
Sbjct: 1053 AQGPDDTKMNEKLYTVCDVAMNI 1075
>sp|Q498H0|PD5BA_XENLA Sister chromatid cohesion protein PDS5 homolog B-A OS=Xenopus laevis
GN=pds5b-a PE=1 SV=1
Length = 1448
Score = 176 bits (447), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 204/907 (22%), Positives = 399/907 (43%), Gaps = 57/907 (6%)
Query: 12 SEDIQEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPGH 70
S+++ + +LV L+ A +N N A LA ++++ A +E I F M G +
Sbjct: 192 SQELLDSVLVNLVPA-HKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISD 250
Query: 71 SHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQ 130
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S Q
Sbjct: 251 LSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELASQ 310
Query: 131 FHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRK 190
+++ +L R D V VR+ ++ L+ P A + L R D +E +R
Sbjct: 311 NKTLWQCYLGRFNDIHVPVRLECVKFASHSLVNHPDLAK--DLTDYLKVRSHDPEEAIRH 368
Query: 191 QVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSI 250
V+ I A L + + + V ER DK V++ M LA I++ L+ G
Sbjct: 369 DVIVSIVTAAKKDLLLVNDQLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQAEAGKE 428
Query: 251 NQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIE 309
+ + WI K+L Y +E + + P +R++ +++ D
Sbjct: 429 SAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDTNA 488
Query: 310 MKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEE 368
+KAL ++ + + L+ ++ L L ++ + + I K++ V++R+ +P K ++
Sbjct: 489 VKALNEMWKCQNMLRHHVKDLLDLIKKPKTEAGSKAIFSKVM----VITRNLPDPGKGQD 544
Query: 369 NFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLSM- 424
Q+ D + L L+ S QA D+ K LG K FL +
Sbjct: 545 FLKKFTQVLEDDEKIRGQLEKLVSPTCSCKQAEVCVRDITKKLGNPKQPTNPFLEMIKFL 604
Query: 425 --KCSYLLFNKEHVKEILLEVAAQKSSANA----------QFMQSCMDILGILARFSPLL 472
+ + + + E + L+++ + A Q +++ +++L +L+ P+
Sbjct: 605 LERIAPVHIDTESI-SALIKLVNKSIDGTADDEDEGVTTDQAIRAGLELLKVLSFTHPIS 663
Query: 473 LGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSR 530
E E L+ LK ++E + E L + G I E S++ +L++ +G
Sbjct: 664 FHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLQQKAKKGPP 723
Query: 531 RQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLE--EKTHLPAVLQSLGCIAQTAMPVFE 588
RQAKY++H + AI + + +++ L L+ L L S+G IAQ A F
Sbjct: 724 RQAKYSIHCIQAIFSSKETQ-FAQIFEPLHKSLDPGNPEQLITSLVSIGHIAQLAPDQFT 782
Query: 589 TR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKDA 644
+S + F+ +L T W D+ S +KI IK +V+ L +K+
Sbjct: 783 APLKSMVATFVVKDLLMTDRLPGKKTTKLWVSDDEVSTETKVKIQAIKMMVRWLLGMKNN 842
Query: 645 HIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVD 702
+ G L ++ + + G+++E + S D + LRLA+A A+++L+++ + I ++
Sbjct: 843 LSKSGNSTLRLLMAILHTDGDLTEHGKLSKPDMSRLRLAAASAIVKLAQEPCYHEIITLE 902
Query: 703 VFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLFGITESKSPEFEEE-- 758
+ L Q ++LF K+H+ + L +Y CA +K P E
Sbjct: 903 QYQLCALVINDECYQVRQLFAQKIHKGLSRLRLPLEYMAICALC-----AKDPVKERRAH 957
Query: 759 -KQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKA 817
+Q L I + + + +V F+ PEY++PY VH AH PD + +D++
Sbjct: 958 ARQCLVKNINVRREYLKQHAAVSEKL--FSLLPEYVVPYTVHLLAHD--PDYVKVQDIEQ 1013
Query: 818 FELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNSHAI 877
+ + L+F++ +L+ K+E+ ++ I ++ + K ++ D ++ + +
Sbjct: 1014 LKDIKECLWFVLEILMSKNEN-----NSHAFIRKMVEYIKQTKDGQNPDDQKMNEKMYTV 1068
Query: 878 CDLGLSI 884
CD+ ++I
Sbjct: 1069 CDVAMNI 1075
>sp|Q5U241|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B OS=Xenopus laevis
GN=pds5b-b PE=2 SV=2
Length = 1464
Score = 175 bits (443), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 202/908 (22%), Positives = 404/908 (44%), Gaps = 59/908 (6%)
Query: 12 SEDIQEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSS-MSGDSRPGH 70
S+++ + +LV L+ A +N N A LA ++++ A +E I F M G +
Sbjct: 192 SQELLDSVLVNLVPA-HKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQVLMLGKTSISD 250
Query: 71 SHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQ 130
++I ++Y +L V+P L +L ++ + RL+ V L+ +F S Q
Sbjct: 251 LSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMFGAKDSELASQ 310
Query: 131 FHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRK 190
++ +L R D V +R+ ++ L+ P A + L R D +E +R
Sbjct: 311 NKPLWQCYLGRFNDIHVPIRLECVKFASHSLMNHPDLAK--DLTEYLKVRSHDPEEAIRH 368
Query: 191 QVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSI 250
V+ I A L + + + V ER DK V++ M LA I++ L+ G
Sbjct: 369 DVIVSIVTAAKKDLLLVNDQLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYSLQVEAGKE 428
Query: 251 NQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIE 309
+ + WI K+L Y +E + + P +R++ +++ D
Sbjct: 429 SAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYLYATLDTNA 488
Query: 310 MKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEE 368
+KAL ++ + + L+ ++ L L ++ + + I K++ V++++ +P K ++
Sbjct: 489 VKALNEMWKCQNMLRHHVKDLLDLIKKPKTEAGSKAIFSKVM----VITKNLPDPGKGQD 544
Query: 369 NFLILDQL--KDANVWKILMNLLDSNTSFDQAFTGRDDLLKILG-AKHRLYDFLSTLSM- 424
Q+ D + L L+ S+ QA D+ K LG K FL +
Sbjct: 545 FLKKFTQVLEDDEKIRGQLEKLVSPTCSYKQAEVCVRDITKKLGNPKQPTNPFLEMIKFL 604
Query: 425 --KCSYLLFNKEHVKEILLEVAAQKSSANA----------QFMQSCMDILGILARFSPLL 472
+ + + + E + L+++ + A Q +++ +++L +L+ P+
Sbjct: 605 LERIAPVHIDTESISS-LIKLVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTHPIS 663
Query: 473 LGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSR 530
E E L+ LK ++E + E L + G I E S++ +L++ +GS
Sbjct: 664 FHSAETFESLLACLKMDDEKVAEAALQIFKNTGNKIEEDFPHIRSALLPVLQQKAKKGSP 723
Query: 531 RQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLE--EKTHLPAVLQSLGCIAQTAMPVFE 588
RQAKY++H + AI + + +++ L L+ L L ++G IAQ A F
Sbjct: 724 RQAKYSIHCIHAIFSSKETQ-FAQIFEPLHKSLDPGNPEQLITSLVTIGHIAQLAPDQFT 782
Query: 589 TR-ESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLKIYGIKTLVKSYLPVKDA 644
+S + F+ +L T W D+ S+ ++KI IK +V+ L +K+
Sbjct: 783 APLKSMVATFVVKDLLMSDQLPGKKTTKLWVPDDEVSQETMVKIQAIKMMVRWLLGMKNN 842
Query: 645 HIRPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPV 701
+ G + L +L ++L + G+++E + S D + LRLA+ A+++L+++ + I +
Sbjct: 843 LSKSG-NSTLRLLTAILHTDGDLTEHGKLSKPDMSRLRLAAGSAIVKLAQEPCYHEIITL 901
Query: 702 DVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYA--CAFLFGITESKSPEFEEE- 758
+ + L Q ++LF K+H+ + L +Y CA +K P E
Sbjct: 902 EQYQLCALVINDECYQVRQLFAQKLHKGLSRLRLPLEYMAICALC-----AKDPVKERRA 956
Query: 759 --KQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVK 816
+Q L I + + + +V F+ PEY++PY VH H PD + +D++
Sbjct: 957 HARQCLVKNINVRREYLKQHAAVSEKL--FSLLPEYVVPYTVHLLTHD--PDYVKVQDIE 1012
Query: 817 AFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNSHA 876
+ + L+F++ +L+ K+E+ ++ I ++ + K +++ D ++ +
Sbjct: 1013 QLKDIKECLWFVLEILMSKNEN-----NSHAFIRKMVEYIKQTKDAQNPDDQKMNEKMYT 1067
Query: 877 ICDLGLSI 884
+CD+ ++I
Sbjct: 1068 VCDVAMNI 1075
>sp|A1L1F4|PDS5A_DANRE Sister chromatid cohesion protein PDS5 homolog A OS=Danio rerio
GN=pds5a PE=2 SV=1
Length = 1320
Score = 167 bits (423), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 215/959 (22%), Positives = 414/959 (43%), Gaps = 67/959 (6%)
Query: 1 MQTIMIVLLEESEDIQEDLL-VILLSALGRNKN------DTARRLAMNVIEQCAGKLEAG 53
M +M ++ E + + ++LL IL++ + +KN D AR L ++ + +
Sbjct: 182 MLDLMSSIIMEGDGVTQELLDTILINLIPAHKNLNKQAYDLARTLLKRTVQTIETCIASF 241
Query: 54 IKQFLVSSMSGDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAV 113
Q LV S S D +I +++ P +L V+P L +L ++ + RL V
Sbjct: 242 FNQVLVMGKSSVSDLSEHVFD---LIQELFAIDPLLLVSVMPQLEFKLKSNDGEERLAVV 298
Query: 114 GLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQ 172
L+ LF S Q ++ FL R D V VR+ ++ CL+ P A D +
Sbjct: 299 KLLAKLFGAKDSELATQNRPLWQCFLGRFNDIHVPVRLECVKFASHCLMNHPDLAKDLTE 358
Query: 173 ILTALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTME 232
L R D +E +R V+ I + LN + + + V ER+ DK V++ M
Sbjct: 359 FLKV---RSHDPEEAIRHDVIVTIINAGKKDLNLVNDQLLGFVRERMLDKRWRVRKEAMM 415
Query: 233 RLADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSV 291
LA +F+ CL + G + + WI K+L Y +E + + P
Sbjct: 416 GLAQLFKKYCLHHEAGKESALKISWIKDKLLHIYYQNSIDDKLLVEKIFAQYMVPHSLET 475
Query: 292 KDRVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSLRQMHQDGDAPEIQKKILF 351
+++++ +++ D +KAL ++ + + L+ ++ L L ++ E +F
Sbjct: 476 EEKMKCLYYLYACLDTNAVKALNEMWKCQNMLRGLVRELLDLHKL----PTSEANTSAMF 531
Query: 352 C-FRVMSRSFAEPAKAEENFLILDQL--KDANVWKILMNLLDSNTSFDQA-FTGRDDLLK 407
++++ +P KA++ +Q+ +D + L L+ S QA R+ K
Sbjct: 532 GKLMTIAKNLPDPGKAQDFMKKFNQVLGEDEKLRLQLEQLISPTCSCKQAEQCVREITRK 591
Query: 408 ILGAKHRLYDFLSTLSM---KCSYLLFNKEHVKEI--LLEVAAQKSSANA-------QFM 455
+ K FL + + + + + E + + LL + + ++ + +
Sbjct: 592 LTFPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLLNKSIEGTADDEDEGVTPDTAI 651
Query: 456 QSCMDILGILARFSPLLLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAAT 513
++ +++L +L+ P E E L+ LK E++ + E + + G I +L
Sbjct: 652 RAGLELLKVLSFTHPTAFHSAETYESLLQCLKMEDDKVAEAAIQIFRNTGQKIETELPQI 711
Query: 514 SSSVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPA 571
S++ +L + G+ QAK AVH + AI + ++ L+ +++ L L L
Sbjct: 712 RSTLIPILHQKAKRGTPHQAKQAVHCIHAIFHNKEVQ-LAQIFEPLSRSLNADVPEQLIT 770
Query: 572 VLQSLGCIAQTAMPVFET-RESEIEEFIKSKILRCSNKIRNDTKACW---DDRSELCLLK 627
L SLG I+ A F + +S + FI +L + N W D+ S L K
Sbjct: 771 PLVSLGHISMLAPDQFASPMKSIVANFIVKDLLMNDRSVGNKNGRLWTADDEVSPEVLAK 830
Query: 628 IYGIKTLVKSYLPVKDAHIRPGIDDLLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKA 687
+ IK LV+ L +K+ + L ++S G+++E + S D + LRLA+ A
Sbjct: 831 VQAIKLLVRWLLGMKNNQSKSANSTLRLPSAMLVSEGDLTEQKKISKSDMSRLRLAAGSA 890
Query: 688 VLRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLF 745
+L+L+++ + I + F L Q ++++ K+H + LL +Y F
Sbjct: 891 ILKLAQEPCYHDIITPEQFQLCGLVINDECYQVRQIYAQKLHVALVKLLLPLEYMAVFAL 950
Query: 746 GITESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHS 805
+ +Q L I + + + + + + PEY++PY++H AH
Sbjct: 951 CAKDPVKERRAHARQCLLKNISVRREYIKQ--NPMAHEKLLSLLPEYVVPYMIHLLAHD- 1007
Query: 806 CPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDI 865
PD+ + +D++ V L+F++ +L+ K+E+ S S + + +IK ++D
Sbjct: 1008 -PDLTKPQDLEQLRDVKECLWFMLEVLMTKNEN--------NSHSFLRKMVENIKQTKDA 1058
Query: 866 V---DAAKSKNSHAICDLGLSI--TKRLSRMEDNSQGVFSSVSLPSTLYKPYEKKEGDD 919
D ++ + +CD+ L + K S D+ + LPS Y P +K+ +D
Sbjct: 1059 QCPDDPKANEKLYIVCDVALFVIANKSTSCHLDSPKDPV----LPSKFYTPPDKEFVND 1113
>sp|Q29RF7|PDS5A_HUMAN Sister chromatid cohesion protein PDS5 homolog A OS=Homo sapiens
GN=PDS5A PE=1 SV=1
Length = 1337
Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 210/922 (22%), Positives = 400/922 (43%), Gaps = 61/922 (6%)
Query: 1 MQTIMIVLLEESEDIQEDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQF 57
M +M ++ E + + ++LL +I L +N N + LA ++++ +EA I F
Sbjct: 187 MLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANF 246
Query: 58 LVSSMSGDSRPGHSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGL 115
+ R S + H ++I +++ P +L V+P L +L ++ + RL V L
Sbjct: 247 FNQVLVL-GRSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRL 305
Query: 116 VGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQIL 174
+ LF S Q ++ FL R D V VR+ ++ CL+ P A D + L
Sbjct: 306 LAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYL 365
Query: 175 TALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERL 234
R D +E +R V+ I A L + + + V ER DK V++ M L
Sbjct: 366 KV---RSHDPEEAIRHDVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGL 422
Query: 235 ADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKD 293
A +++ CL G + WI K+L Y +E + L P ++
Sbjct: 423 AQLYKKYCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEE 482
Query: 294 RVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFC 352
R++ +++ D +KAL ++ + + L+ ++ L L +Q + + + K++
Sbjct: 483 RMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLM-- 540
Query: 353 FRVMSRSFAEPAKAEENFLILDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKIL 409
++++ +P KA++ +Q L D + + LL S T S QA R+ K+
Sbjct: 541 --TIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADICVREIARKLA 598
Query: 410 GAKHRLYDFLSTLSM---KCSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQS 457
K FL + + + + + E + ++ +E A ++ + ++S
Sbjct: 599 NPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRS 658
Query: 458 CMDILGILARFSPLLLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSS 515
+++L +L+ P E E L+ L+ E++ + E + + G I L S
Sbjct: 659 GLELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRS 718
Query: 516 SVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVL 573
++ +L + G+ QAK AVH + AI + ++ L+ +++ L L L L
Sbjct: 719 TLIPILHQKAKRGTPHQAKQAVHCIHAIFTNKEVQ-LAQIFEPLSRSLNADVPEQLITPL 777
Query: 574 QSLGCIAQTAMPVFET-RESEIEEFIKSKILRCSNKIRNDTKACWDDRSEL---CLLKIY 629
SLG I+ A F + +S + FI +L W E+ L K+
Sbjct: 778 VSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQ 837
Query: 630 GIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAV 688
IK LV+ L +K+ + + L +L +ML S G+++E S D + LRLA+ A+
Sbjct: 838 AIKLLVRWLLGMKNNQSKSA-NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAI 896
Query: 689 LRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFG 746
++L+++ + I + F L Q +++F K+H+ + LL +Y F
Sbjct: 897 MKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALC 956
Query: 747 ITESKSPEFEEEKQNLADIIQMHHQ-MKARQISVQSDANSFATYPEYIIPYLVHTFAHHS 805
+ +Q L I + + +K ++ + + PEY++PY++H AH
Sbjct: 957 AKDPVKERRAHARQCLLKNISIRREYIKQNPMATEK---LLSLLPEYVVPYMIHLLAHD- 1012
Query: 806 CPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDI 865
PD +DV + L+F++ +L+ K+E+ S + + + +IK + D
Sbjct: 1013 -PDFTRSQDVDQLRDIKECLWFMLEVLMTKNEN--------NSHAFMKKMAENIKLTRDA 1063
Query: 866 VDAAKSKNS---HAICDLGLSI 884
+SK + + +CD+ L +
Sbjct: 1064 QSPDESKTNEKLYTVCDVALCV 1085
>sp|A4L9P7|PDS5A_RAT Sister chromatid cohesion protein PDS5 homolog A OS=Rattus norvegicus
GN=Pds5a PE=2 SV=1
Length = 1333
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 209/922 (22%), Positives = 400/922 (43%), Gaps = 61/922 (6%)
Query: 1 MQTIMIVLLEESEDIQEDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQF 57
M +M ++ E + + ++LL +I L +N N + LA ++++ +EA I F
Sbjct: 186 MLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANF 245
Query: 58 LVSSMSGDSRPGHSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGL 115
+ R S + H ++I +++ P +L V+P L +L ++ + RL V L
Sbjct: 246 FNQVLVL-GRSSVSDLSEHVFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRL 304
Query: 116 VGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQIL 174
+ LF S Q ++ FL R D V VR+ ++ CL+ P A D + L
Sbjct: 305 LAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYL 364
Query: 175 TALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERL 234
R D +E +R V+ I A L + + + V ER DK V++ M L
Sbjct: 365 KV---RSHDPEEAIRHDVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGL 421
Query: 235 ADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKD 293
A +++ CL G + WI K+L Y +E + L P ++
Sbjct: 422 AQLYKKYCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEE 481
Query: 294 RVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFC 352
R++ +++ D +KAL ++ + + L+ ++ L L +Q + + + K++
Sbjct: 482 RMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLM-- 539
Query: 353 FRVMSRSFAEPAKAEENFLILDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKIL 409
++++ +P KA++ +Q L D + + LL S T S QA R+ K+
Sbjct: 540 --TIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADICVREIARKLA 597
Query: 410 GAKHRLYDFLSTLSM---KCSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQS 457
K FL + + + + + E + ++ +E A ++ + ++S
Sbjct: 598 NPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRS 657
Query: 458 CMDILGILARFSPLLLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSS 515
+++L +L+ P E E L+ L+ E++ + E + + G I L S
Sbjct: 658 GLELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRS 717
Query: 516 SVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVL 573
++ +L + G+ QAK AVH + AI + ++ L+ +++ L L L L
Sbjct: 718 TLIPILHQKAKRGTPHQAKQAVHCIHAIFSNKEVQ-LAQIFEPLSRSLNADVPEQLITPL 776
Query: 574 QSLGCIAQTAMPVFET-RESEIEEFIKSKILRCSNKIRNDTKACWDDRSEL---CLLKIY 629
SLG I+ A F + +S + FI +L W E+ L K+
Sbjct: 777 VSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQ 836
Query: 630 GIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAV 688
IK LV+ L +K+ + + L +L +ML S G+++E S D + LRLA+ A+
Sbjct: 837 AIKLLVRWLLGMKNNQSKSA-NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAI 895
Query: 689 LRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFG 746
++L+++ + I + F L Q +++F K+H+ + LL +Y F
Sbjct: 896 MKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALC 955
Query: 747 ITESKSPEFEEEKQNLADIIQMHHQ-MKARQISVQSDANSFATYPEYIIPYLVHTFAHHS 805
+ +Q L I + + +K ++ + + PEY++PY++H AH
Sbjct: 956 AKDPVKERRAHARQCLLKNISIRREYIKQNPMATE---KLLSLLPEYVVPYMIHLLAHD- 1011
Query: 806 CPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDI 865
PD +DV + L+F++ +L+ K+E+ S + + + +IK + D
Sbjct: 1012 -PDFTRSQDVDQLRDIKECLWFMLEVLMTKNEN--------NSHAFMKKMAENIKLTRDA 1062
Query: 866 VDAAKSKNS---HAICDLGLSI 884
++K + + +CD+ L +
Sbjct: 1063 QSPDEAKTNEKLYTVCDVALCV 1084
>sp|Q5F3V3|PDS5A_CHICK Sister chromatid cohesion protein PDS5 homolog A OS=Gallus gallus
GN=PDS5A PE=2 SV=2
Length = 1330
Score = 162 bits (410), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 208/922 (22%), Positives = 400/922 (43%), Gaps = 61/922 (6%)
Query: 1 MQTIMIVLLEESEDIQEDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQF 57
M +M ++ E + + ++LL +I L +N N A LA ++++ +E I F
Sbjct: 181 MLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQAFDLAKVLLKRTVQTIEPCIANF 240
Query: 58 LVSSMS-GDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLV 116
+ G S ++I +++ P +L V+P L +L ++ + RL V L+
Sbjct: 241 FNQVLVLGKSSVSDLSEHVFDLILELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLL 300
Query: 117 GDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILT 175
LF S Q ++ FL R D V VR+ ++ CL+ P A D + L
Sbjct: 301 AKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLK 360
Query: 176 ALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLA 235
R D +E +R V+ I L+ + + + V ER DK V++ M LA
Sbjct: 361 V---RSHDPEEAIRHDVIVTIITAGKRDLSLVNDQLLGFVRERTLDKRWRVRKEAMMGLA 417
Query: 236 DIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKDR 294
+++ CL G + WI K+L Y +E + L P ++R
Sbjct: 418 QLYKKYCLHAEAGKDAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEER 477
Query: 295 VRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCF 353
++ +++ D +KAL ++ + + L+ ++ L L +Q + ++ + K++
Sbjct: 478 MKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANSAAMFGKLM--- 534
Query: 354 RVMSRSFAEPAKAEENFLILDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKILG 410
++++ +P KA++ +Q L D + + LL S T S QA R+ K+
Sbjct: 535 -TIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLAN 593
Query: 411 AKHRLYDFLSTLSM---KCSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSC 458
K FL + + + + + E + ++ +E A ++ + +++
Sbjct: 594 PKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDTAIRAG 653
Query: 459 MDILGILARFSPLLLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSS 516
+++L +L+ P E E L+ L+ E++ + E + + G I L S+
Sbjct: 654 LELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRST 713
Query: 517 VDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQ 574
+ +L + G+ QAK AVH + AI + ++ L+ +++ L L L L
Sbjct: 714 LIPILHQKAKRGTPHQAKQAVHCIHAIFSNKEVQ-LAQIFEPLSRSLNADVPEQLITPLV 772
Query: 575 SLGCIAQTAMPVFET-RESEIEEFIKSKILRCSNKIRNDTKACWDDRSEL---CLLKIYG 630
SLG I+ A F + +S + F+ +L W E+ L K+
Sbjct: 773 SLGHISMLAPDQFASPMKSVVANFVVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVQA 832
Query: 631 IKTLVKSYLPVKDAHIRPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVL 689
IK LV+ L +K+ + + L +L +ML S G+++E S D + LRLA+ A++
Sbjct: 833 IKLLVRWLLGMKNNQSKSA-NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIM 891
Query: 690 RLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGI 747
+L+++ + I + F L Q +++F K+H+ + LL +Y F
Sbjct: 892 KLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALC- 950
Query: 748 TESKSPEFEEEKQNLADIIQMHHQMKARQISVQSDANS--FATYPEYIIPYLVHTFAHHS 805
+K P +E + + + + ++ I AN + PEY++PY++H AH
Sbjct: 951 --AKDP-VKERRAHARQCLLKNISIRREYIKQNPMANEKLLSLLPEYVVPYMIHLLAHD- 1006
Query: 806 CPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDI 865
PD + +DV V L+F++ +L+ K+E+ S + + + +IK + D
Sbjct: 1007 -PDFTKPQDVDQLRDVKECLWFMLEVLMTKNEN--------NSHAFMKKMAENIKLTRDA 1057
Query: 866 VDAAKSKNS---HAICDLGLSI 884
+ K + + +CD+ L +
Sbjct: 1058 QSPDEPKANEKLYTVCDVALCV 1079
>sp|Q4QXM3|PD5AA_XENLA Sister chromatid cohesion protein PDS5 homolog A-A OS=Xenopus laevis
GN=pds5a-a PE=1 SV=1
Length = 1323
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 206/903 (22%), Positives = 392/903 (43%), Gaps = 54/903 (5%)
Query: 16 QEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMS-GDSRPGHSHID 74
Q D ++I L + +N N A LA ++++ A +E I F + G S
Sbjct: 197 QLDSILINLISAHKNLNKQAFDLAKVLLKRTAQTIEPCIANFFNQVLVLGKSSVSDLSEH 256
Query: 75 YHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSV 134
++I +++ P +L V+P L +L ++ + RL V L+ LF S Q +
Sbjct: 257 VFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPL 316
Query: 135 FSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRKQVV 193
+ FL R D V VR+ ++ CL+ P A D + L R D +E +R V+
Sbjct: 317 WQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEFLKV---RSHDPEEAIRHDVI 373
Query: 194 AVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQN 253
I A L + + + V ER DK V++ M LA +++ CL G
Sbjct: 374 VTIITAAKKDLFLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEGGKDAAE 433
Query: 254 EFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKA 312
+ WI K+L Y +E + L P ++R++ +++ D +KA
Sbjct: 434 KVSWIKDKLLHIYYQNSIDDKLLVEKIFAQQLVPHNLETEERMKCLYYLYASLDPNAVKA 493
Query: 313 LEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFL 371
L ++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 494 LNEMWKCQNMLRSHVRELLDLHKQPTSEANTTAMFAKLM----TVAKNLPDPGKAQDFVK 549
Query: 372 ILDQL--KDANVWKILMNLLDSNTSFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM---K 425
+Q+ +D + L L+ + S QA RD K+ K FL + +
Sbjct: 550 KFNQVLGEDEKLRSQLEVLISPSCSCKQADVCVRDIARKVANPKQPTNPFLEMVKFLLER 609
Query: 426 CSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSCMDILGILARFSPLLLGG- 475
+ + + E + ++ +E A ++ + +++ +++L +L+ P
Sbjct: 610 IAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRAGLELLKVLSFTHPTSFHSD 669
Query: 476 -TEEELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAK 534
T E L+ L+ E++ + E + + G I L S++ +L + G+ QAK
Sbjct: 670 ETYESLLQCLRMEDDKVAEAAIQIFRNTGHRIETDLPQIRSALIPILHQKAKRGTPHQAK 729
Query: 535 YAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFET-RE 591
AVH + +I + ++ L+ +++ L L L L SLG I+ A F + +
Sbjct: 730 QAVHCIHSIFSNKEVQ-LAQIFEPLSRSLNADVPEQLVTPLVSLGHISMLAPDQFASPMK 788
Query: 592 SEIEEFIKSKILRC--SNKIRNDTKACWDDR-SELCLLKIYGIKTLVKSYLPVKDAHIRP 648
S + FI +L SN +N C D+ S L K IK LV+ L +K+ +
Sbjct: 789 SVVANFIVKDLLMNDRSNGDKNGKLWCPDEEVSPEVLAKGQAIKLLVRWLLGMKNNQSKS 848
Query: 649 GIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFH 705
+ L +L +ML S G+++E S D + LRLA+ A+++L+++ + I + F
Sbjct: 849 A-NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGAAIMKLAQEPCYHEIITPEQFQ 907
Query: 706 LTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADI 765
L Q +++F K+H+ + L +Y F + +Q L
Sbjct: 908 LCALVINDECYQVRQIFAQKLHKALVKLQLPLEYMAIFALCAKDPVKERRAHARQCLLKN 967
Query: 766 IQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRL 825
I + + +Q V S+ + PEY++PY++H AH PD + +D+ + L
Sbjct: 968 ISIRREY-IKQNPV-SNEKLLSLLPEYVVPYMIHLLAHD--PDFTKPQDIDQLRDIKECL 1023
Query: 826 YFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNSHAICDLGL 882
+F++ +L+ K+E+ S + + + +IK + D D ++ +CD+ L
Sbjct: 1024 WFMLEVLMTKNEN--------NSHAFMKKLCENIKQTRDAQAPDDPKANEKLFTVCDVAL 1075
Query: 883 SIT 885
+
Sbjct: 1076 CVV 1078
>sp|Q4KLU7|PD5AB_XENLA Sister chromatid cohesion protein PDS5 homolog A-B OS=Xenopus laevis
GN=pds5a-b PE=1 SV=1
Length = 1323
Score = 161 bits (408), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 206/903 (22%), Positives = 392/903 (43%), Gaps = 54/903 (5%)
Query: 16 QEDLLVILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQFLVSSMS-GDSRPGHSHID 74
Q D ++I L + +N N A LA ++++ A +E I F + G S
Sbjct: 197 QLDSILINLISAHKNLNKQAFDLAKVLLKRTAQTIEPCIANFFNQVLVLGKSSVSDLSEH 256
Query: 75 YHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSV 134
++I +++ P +L V+P L +L ++ + RL V L+ LF S Q +
Sbjct: 257 VFDLIQELFAIDPHLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPL 316
Query: 135 FSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQILTALCDRLLDFDENVRKQVV 193
+ FL R D V VR+ ++ CL+ P A D + L R D +E +R V+
Sbjct: 317 WQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEFLKV---RSHDPEEAIRHDVI 373
Query: 194 AVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQN 253
I A L + + + V ER DK V++ M LA +++ CL G
Sbjct: 374 VTIITAAKKDLFLVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEGGKDAAE 433
Query: 254 EFEWIPGKILRCLYDKDFGSD-TIESVLCGSLFPTGFSVKDRVRHWVRIFSGFDRIEMKA 312
+ WI K+L Y +E + L P ++R++ +++ D +KA
Sbjct: 434 KVSWIKDKLLHIYYQNSIDDKLLVEKIFAQQLVPHNLETEERMKCLYYLYASLDPNAVKA 493
Query: 313 LEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFL 371
L ++ + + L+ ++ L L +Q + + + K++ ++++ +P KA++
Sbjct: 494 LNEMWKCQNMLRSHVRELLDLHKQPTSEANTTAMFAKLM----TVAKNLPDPGKAQDFVK 549
Query: 372 ILDQL--KDANVWKILMNLLDSNTSFDQA-FTGRDDLLKILGAKHRLYDFLSTLSM---K 425
+Q+ +D + L L+ + S QA RD K+ K FL + +
Sbjct: 550 KFNQVLGEDEKLRSQLEVLISPSCSCKQADVCVRDIARKVANPKQPTNPFLEMVKFLLER 609
Query: 426 CSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQSCMDILGILARFSPLLLGG- 475
+ + + E + ++ +E A ++ + +++ +++L +L+ P
Sbjct: 610 IAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRAGLELLKVLSFTHPTSFHSD 669
Query: 476 -TEEELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAK 534
T E L+ L+ E++ + E + + G I L S++ +L + G+ QAK
Sbjct: 670 ETYESLLQCLRMEDDKVAEAAIQIFRNTGHRIETDLPQIRSALIPILHQKAKRGTPHQAK 729
Query: 535 YAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVLQSLGCIAQTAMPVFET-RE 591
AVH + +I + ++ L+ +++ L L L L SLG I+ A F + +
Sbjct: 730 QAVHCIHSIFSNKEVQ-LAQIFEPLSRSLNADVPEQLVTPLVSLGHISMLAPDQFASPMK 788
Query: 592 SEIEEFIKSKILRC--SNKIRNDTKACWDDR-SELCLLKIYGIKTLVKSYLPVKDAHIRP 648
S + FI +L SN +N C D+ S L K IK LV+ L +K+ +
Sbjct: 789 SVVANFIVKDLLMNDRSNGDKNGKLWCPDEEVSPEVLAKGQAIKLLVRWLLGMKNNQSKS 848
Query: 649 GIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQ--WDHKIPVDVFH 705
+ L +L +ML S G+++E S D + LRLA+ A+++L+++ + I + F
Sbjct: 849 A-NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGAAIMKLAQEPCYHEIITPEQFQ 907
Query: 706 LTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADI 765
L Q +++F K+H+ + L +Y F + +Q L
Sbjct: 908 LCALVINDECYQVRQIFAQKLHKALVKLQLPLEYMAIFALCAKDPVKERRAHARQCLLKN 967
Query: 766 IQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELVYCRL 825
I + + +Q V S+ + PEY++PY++H AH PD + +D+ + L
Sbjct: 968 ISIRREY-IKQNPV-SNEKLLSLLPEYVVPYMIHLLAHD--PDFTKPQDIDQLRDIKECL 1023
Query: 826 YFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIV---DAAKSKNSHAICDLGL 882
+F++ +L+ K+E+ S + + + +IK + D D ++ +CD+ L
Sbjct: 1024 WFMLEVLMTKNEN--------NSHAFMKKLCENIKQTRDAQAPDDPKANEKLFTVCDVAL 1075
Query: 883 SIT 885
+
Sbjct: 1076 CVV 1078
>sp|Q6A026|PDS5A_MOUSE Sister chromatid cohesion protein PDS5 homolog A OS=Mus musculus
GN=Pds5a PE=3 SV=3
Length = 1332
Score = 160 bits (404), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 210/922 (22%), Positives = 402/922 (43%), Gaps = 61/922 (6%)
Query: 1 MQTIMIVLLEESEDIQEDLL---VILLSALGRNKNDTARRLAMNVIEQCAGKLEAGIKQF 57
M +M ++ E + + ++LL +I L +N N + LA ++++ +EA I F
Sbjct: 186 MLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANF 245
Query: 58 LVSSMSGDSRPGHSHIDYH--EVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGL 115
+ R S + H ++I +++ PQ+L V+P L +L ++ + RL V L
Sbjct: 246 FNQVLVL-GRSSVSDLSEHVFDLIQELFAIDPQLLLSVMPQLEFKLKSNDGEERLAVVRL 304
Query: 116 VGDLFAVPGSANNEQFHSVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRA-DAPQIL 174
+ LF S Q ++ FL R D V VR+ ++ CL+ P A D + L
Sbjct: 305 LAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYL 364
Query: 175 TALCDRLLDFDENVRKQVVAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERL 234
R D +E +R V+ I A L + + + V ER DK V++ M L
Sbjct: 365 KV---RSHDPEEAIRHDVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGL 421
Query: 235 ADIFRGCCLRNFNGSINQNEFEWIPGKILRCLYDKDFGSDT-IESVLCGSLFPTGFSVKD 293
A +++ CL G + WI K+L Y +E + L P ++
Sbjct: 422 AQLYKKYCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEE 481
Query: 294 RVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSL-RQMHQDGDAPEIQKKILFC 352
R++ +++ D +KAL ++ + + L+ ++ L L +Q + + + K++
Sbjct: 482 RMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLM-- 539
Query: 353 FRVMSRSFAEPAKAEENFLILDQ-LKDANVWKILMNLLDSNT-SFDQA-FTGRDDLLKIL 409
++++ +P KA++ +Q L D + + LL S T S QA R+ K+
Sbjct: 540 --TIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLA 597
Query: 410 GAKHRLYDFLSTLSM---KCSYLLFNKEHVKEIL------LEVAA---QKSSANAQFMQS 457
K FL + + + + + E + ++ +E A ++ + ++S
Sbjct: 598 NPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRS 657
Query: 458 CMDILGILARFSPLLLGGTE--EELVNLLKEENEIIKEGILHVLAKAGGTIREQLAATSS 515
+++L +L+ P E E L+ L+ E++ + E + + G I L S
Sbjct: 658 GLELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRS 717
Query: 516 SVDLLLERLCLEGSRRQAKYAVHALAAITKDDGLKSLSVLYKRLVDMLEEKT--HLPAVL 573
++ +L + G+ QAK AVH + AI + ++ L+ +++ L L L L
Sbjct: 718 TLIPILHQKAKRGTPHQAKQAVHCIHAIFSNKEVQ-LAQIFEPLSRSLNADVPEQLITPL 776
Query: 574 QSLGCIAQTAMPVFET-RESEIEEFIKSKILRCSNKIRNDTKACWDDRSEL---CLLKIY 629
SLG I+ A F + +S + FI +L W E+ L K+Y
Sbjct: 777 VSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVY 836
Query: 630 GIKTLVKSYLPVKDAHIRPGIDDLLGILKSML-SYGEMSEDIESSSVDKAHLRLASAKAV 688
++ LV+ L +K+ + + L +L +ML S G+++E S D + LRLA+ A+
Sbjct: 837 LLRLLVRWLLGMKNNQSKSA-NSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAI 895
Query: 689 LRLSRQ--WDHKIPVDVFHLTLRTPEISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFG 746
++L+++ + I + F L Q +++F K+H+ + LL +Y F
Sbjct: 896 MKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALC 955
Query: 747 ITESKSPEFEEEKQNLADIIQMHHQ-MKARQISVQSDANSFATYPEYIIPYLVHTFAHHS 805
+ +Q L I + + +K ++ + + PEY++PY++H AH
Sbjct: 956 AKDPVKERRAHARQCLLKNISIRREYIKQNPMATE---KLLSLLPEYVVPYMIHLLAHD- 1011
Query: 806 CPDIDECKDVKAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDI 865
PD +DV + L+F++ +L+ K+E+ S + + + +IK + D
Sbjct: 1012 -PDFTRSQDVDQLRDIKECLWFMLEVLMTKNEN--------NSHAFMKKMAENIKLTRDA 1062
Query: 866 VDAAKSKNS---HAICDLGLSI 884
+SK + + +CD+ L +
Sbjct: 1063 QSPDESKTNEKLYTVCDVALCV 1084
>sp|Q9HFF5|PDS5_SCHPO Sister chromatid cohesion protein pds5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pds5 PE=1 SV=1
Length = 1205
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 208/930 (22%), Positives = 389/930 (41%), Gaps = 118/930 (12%)
Query: 35 ARRLAMNVIEQCAGKLEAGIKQFLVSSMSGDSRPGHS-------HIDYHEVIYDVYRCSP 87
A +LA N+ A +L+ + Q+ S + DSR S I H ++ +++ +P
Sbjct: 214 AFQLARNIFHDSADRLQRYVCQYF-SDIIFDSRDSLSDSMTTPEFIFSHNLVLQLWKYAP 272
Query: 88 QILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNEQFHSVFSEFLKRLTDRIV 147
L ++P EL +Q RL A+ VG + +A + V+S F RL D+ V
Sbjct: 273 TTLLNIIPQFENELQAEQTSVRLVAIETVG--LMLQDNAIWSDYPRVWSAFCGRLNDKSV 330
Query: 148 AVRMSVLEHVKSCLLTDPSRADAPQ-ILTALCDRLLDFDENVRKQVVAVICDVACHALN- 205
A R+ +E + L + ++ + ++ L +L D DE VR + I +
Sbjct: 331 ACRIKCIEVASNALQNSLATSEIIENVVQMLQSKLADTDEKVRVATLKTIEQLTFETFKM 390
Query: 206 SIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQNE-----FEWIPG 260
V+ +KL+ +RLRD+ + V+ + L+ I+ R + I+ E F WIP
Sbjct: 391 QFSVQALKLMGDRLRDRKLNVRLQAIRTLSQIYN----RAYQDLIDGVEYSIQMFSWIPS 446
Query: 261 KILRCLYDKDFGSDTIESVLCGSLFPTGFS--VKDRVRHWVRIFSGFDRIEMKALEKILE 318
+L Y D ++ + L S + R+ F M+ +L+
Sbjct: 447 SLLEVFYVNDETTNAAVEICMAELVLQYLSSDTQTRLNRLFLSIKYFSEKAMRVFILLLQ 506
Query: 319 QKQRLQQEMQRYLSLRQMH----QDGDAPEIQKKILFCFRVMSRSFAEPAKAEENFLILD 374
++ + + + Y+ + + D D I K+ ++S + P E F
Sbjct: 507 RQVKYSELLNYYIECCKNYNGGVMDNDEESITNKLKKVIDIISSKSSNPTLTEATFRKFA 566
Query: 375 QLKDANVWKILMNLLDSNTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKC-------- 426
+L D +K+L+ + + L K R+ + LST S++C
Sbjct: 567 ELNDRQSYKMLLQTFSIKSEYQVVLKSIKYLFK------RVSETLSTASLECFRIFVYRS 620
Query: 427 SYLLFNKEHVKEILLEVAAQKSSANAQFMQSCMDILGILARFSPLLLGGTEEELVNLLKE 486
+ FNK +V EI+ + N F++ +L L P + G +++
Sbjct: 621 ALFAFNKSNVHEIIQLLNEPVKYHN--FLKPSEALLQHLPLIHPNIYGEV------VIEV 672
Query: 487 ENEIIKEGILH----VLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAA 542
EN I+ GI + A + + R++ + ++ +L +LCL G++ QAK A +A
Sbjct: 673 ENIIVSSGIESDPKVIKALSQFSKRKKNFSIQTTTAEILRKLCLHGTQEQAKQAATIIAI 732
Query: 543 I-TKDDGLKSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMPVFETRESEIEEFIKSK 601
TK+ L ++ +V+ LE LP L +LG + + E ++ EF+ K
Sbjct: 733 TETKEFKLDMIT----NIVENLEYNGGLPVRLMTLGQLFLYTLEEVEKVADQVTEFLVKK 788
Query: 602 IL-RCSNK---IRNDTKAC-WDDRSELCLLKIYGIKTLVKSYLPVKDA----HIRPGIDD 652
++ R K ND + C ++ L + K+ I+ LV +I I
Sbjct: 789 VIQRFPEKYDDTHNDEEWCTYEKLDNLTMCKVLAIRVLVNRLRAAAGGTEALNIGAPIIK 848
Query: 653 LLGILKSMLSYGEMSEDIESSSVDKAHLRLASAKAVLRLSRQWDHKIPVDVFHLTLRT-P 711
LL +L +++ GE+S + + +A+LRL ++K L+L IP H+ +
Sbjct: 849 LLKVL--LMADGELSPFKNTPKISRAYLRLTASKYFLKLC-----SIPFYAEHIDFSSYV 901
Query: 712 EISFP------QAKKLFLSKVHQYVKDRLLD-AKYACAFLFGITESKSPEFEEEKQNLAD 764
+IS + LFL+K+ + ++ + L + Y FL + PE EE K +
Sbjct: 902 QISLLCQDENFDVRNLFLTKLQKQLQLKKLPISYYPLLFLTAV----DPE-EEIKTKASI 956
Query: 765 IIQMHHQMKARQISVQSDANSFATYPEYIIPYLVHTFAHHSCPDIDECKDVKAFELV-YC 823
I+ Q++ + F EY+ YL+H +HH PDI + + + + Y
Sbjct: 957 WIR-------SQVAFFQKTHDFTM--EYVATYLIHLLSHH--PDISSIESENSLDFIAYI 1005
Query: 824 RLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNSHAICDLGLS 883
R Y N E++ ++ + + IK S D+++ + + + D+
Sbjct: 1006 RFYV-------------DTVVNSENVPIVFHLMQRIKQSYDVIEDGNNY-IYVLSDMA-- 1049
Query: 884 ITKRLSRMEDNSQGVFSSVSLPSTLYKPYE 913
+++ +++ + G +S + P + PYE
Sbjct: 1050 --QKILQVKSQNFG-WSLTTYPKQIKLPYE 1076
>sp|Q552Q7|PDS5_DICDI Sister chromatid cohesion protein PDS5 homolog OS=Dictyostelium
discoideum GN=pds5 PE=3 SV=1
Length = 1450
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 190/909 (20%), Positives = 372/909 (40%), Gaps = 136/909 (14%)
Query: 76 HEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVPGSANNE---QFH 132
+E++++++ P+ + + L +L R A ++ ++ SA++E Q
Sbjct: 412 NEILFEMFNILPEFIYPALQNLEFDLEDVNASIRKGAAIVLSRCYST-ESASDELIAQRP 470
Query: 133 SVFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILTALCDRLLDFDENVRKQV 192
++++ FL R D + +R ++E S T S + ++L ++ DR D + ++R +
Sbjct: 471 TLYTTFLNRFHDVDIKIRTVMMEF--SEHFTTTSDLEMERVLKSVRDRFRDSEPDIRIKA 528
Query: 193 VAVICDVACHALNSIPVETVKLVAERLRDKSVLVKRYTMERLADIFRGCCLRNFNGSINQ 252
+ + + E + ER+RDK V++ L+ ++R +R G I+
Sbjct: 529 IQIFQKYIIKNPELMNPELMSEYLERVRDKDSKVRKDAEISLSTVWRS--VREKYGPIDD 586
Query: 253 ------NEFEWIPGKILRCL--YDKDFGSDTIESVLCGSLFPTGFSVKDRVRHWVRIFSG 304
+ F IP ++ CL YD D IE L P VK+R + ++ I+
Sbjct: 587 WSNTLIDCFSTIPNTLIHCLGLYDDD--KYRIEIAFDSILLPQHSDVKNRSQVFLEIYKY 644
Query: 305 FDRIEMKALEKILEQKQRLQQEMQRYLSLRQMHQD-----GDAPEIQKK----------- 348
D + +K LE+K+ L+QE +L+L Q ++ G KK
Sbjct: 645 LDESNKQLFKKYLEEKKSLRQE---FLALIQFLKNPKVVGGSTTPTSKKSQPPQQQQQQQ 701
Query: 349 -----------------ILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDS 391
I ++ + E +K LI + + +L+ + D
Sbjct: 702 QQQQQQLQQPENDIEVYITHVDNLLPKFIGESSKKLVRQLITPS--NKKILDLLVLISDI 759
Query: 392 NTSFDQAFTGRDDLLKILGAKHRLYDFLSTLSMKCSYLLFNKEHVKEILLEVAAQKSSAN 451
NT+F + + + ++ + +F+ + K +Y + KE++K +L + + N
Sbjct: 760 NTTFQEQYNIKISIISKAQNESSFSEFIKYMVNKLAYSIVGKENIKYLLRGLRSDLGLDN 819
Query: 452 ----------AQF------------MQSCMDILGILARFSPLLLGGTEEELVNLLKEENE 489
+F + +++L +L++ + ++LV L
Sbjct: 820 FDKNNPIDLLEEFNEKIYEKEVKDGVPETLEVLLMLSQVYANIFDDYGDQLVGFLTCSKS 879
Query: 490 IIKEGILHVLAKAGGTIREQLAATSSSVDLLLE-------RLCLEGSRRQAKYAVHALAA 542
I+ +L +L+ + T++ S++D+LL L + K+A AL +
Sbjct: 880 IVY-PVLQILSNSWKTLKLSKKTLKSTLDMLLRLTQVPQPTLARLAFKTFIKFATPALTS 938
Query: 543 ITKDDG-------LKSLSVLYKRLVDMLEEKT-HLPAVLQSLGCIAQTAMPVFETRESEI 594
I +G + +L L L D LE+K+ +L ++L+ +GC+A+ V +
Sbjct: 939 INSTNGKVDNNKLVVTLKDLANNLFDQLEDKSKNLLSILEVIGCLAKGYSLVLSEHLDTL 998
Query: 595 EEFIKSKILRCSNKIRNDTKACWDDRSELCLLKIYGIKTLVKSYLPVKDAHIRPGIDDLL 654
+ + KI+ + + K + E L Y L+K A I+ + LL
Sbjct: 999 DILLIKKIMTGVCTLDFNQKVQLNKSVEHHLNTSYSKDVLIKI------AAIKCMSNYLL 1052
Query: 655 GI---------LKSML--SYGEMSEDIESSSVDKAHLRLASAKAVLRLSR--QWDHKIPV 701
G+ + +ML Y + ++ + ++K+HL++ A +LR+ + Q++ +I
Sbjct: 1053 GLREITKKSHEMVNMLFEFYIGLDKNKTYNDLEKSHLKIHIAIGLLRVFQRSQYEKEITP 1112
Query: 702 DVFHLTLRTPEISF-----PQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFE 756
F L + I+ P ++L + +R L KY AF + S
Sbjct: 1113 QQFILICNSTSITTKQRGDPLIRRLIEKLAKVMILNR-LPMKYMAAFGMAAQQPYSV-LA 1170
Query: 757 EEKQNLADIIQMHHQMKARQISVQSDANSFAT-YPEYIIPYLVHTFAHHSCPDIDECKDV 815
+++ II+ + +R + S A + YPE +PY ++ +H D +D
Sbjct: 1171 LVRKHSTSIIKTRRMVISRLAASLSMAKNLTEFYPESSMPYFLYVVSHRE----DFERDA 1226
Query: 816 KAFELVYCRLYFIVSMLIHKDEDVKSEASNKESISVIISIFRSIKCSEDIVDAAKSKNSH 875
+ C L F + +L+ EA N S+I +IF +K S D +D KSKN
Sbjct: 1227 PDYIESACYLNFFIDLLVE-------EADN---YSIIHTIFTKLKRSTDALD-KKSKNHI 1275
Query: 876 AICDLGLSI 884
+LGL I
Sbjct: 1276 IAAELGLQI 1284
>sp|Q04264|PDS5_YEAST Sister chromatid cohesion protein PDS5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PDS5 PE=1 SV=1
Length = 1277
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 164/819 (20%), Positives = 325/819 (39%), Gaps = 110/819 (13%)
Query: 64 GDSRPGHSHIDYHEVIYDVYRCSPQILSGVVPYLTGELLTDQLDTRLKAVGLVGDLFAVP 123
+SR + H+++ ++ P++++ V+ ++ EL ++ R +A L+G +
Sbjct: 251 NNSRLLTVVVKLHKLVLRLWETVPELINAVIGFIYHELSSENELFRKEATKLIGQILTSY 310
Query: 124 GSANNEQFHS-VFSEFLKRLTDRIVAVRMSVLEHVKSCLLTDPSRADAPQILT-ALCDRL 181
N HS F ++ ++ D VR+ E + + T R D + L AL
Sbjct: 311 SDLNFVSTHSDTFKAWISKIADISPDVRVEWTESIPQIIAT---REDISKELNQALAKTF 367
Query: 182 LDFDENVRKQVVAVICDVACHALNSIPV-ETVKLVAERLRDKSVL-VKRYTMERLADIFR 239
+D D VR+ V + N +PV E K + + S+L + R + + ++
Sbjct: 368 IDSDPRVRRTSVMI--------FNKVPVTEIWKNITNKAIYTSLLHLAREKHKEVRELCI 419
Query: 240 GCCLRNFNGSIN------QNEFEW-----IPGKILRCLYDKDFG-SDTIESVLCGSLFPT 287
+ ++ S+N QN+ W IP + Y D ++ ++SV+ L P
Sbjct: 420 NTMAKFYSNSLNEIERTYQNKEIWEIIDTIPSTLYNLYYINDLNINEQVDSVIFEYLLPF 479
Query: 288 GFSVKDRVRHWVRIFSGFDRIEMKALEKILEQKQRLQQEMQRYLSLRQMHQDGDA----- 342
RV + + S FD+ + ++ ++ + +Y+ + + ++
Sbjct: 480 EPDNDKRVHRLLTVLSHFDKKAFTSFFAFNARQIKISFAISKYIDFSKFLNNQESMSSSQ 539
Query: 343 -PEIQKKILFCFRVMSRSFAEPAKAEENFLILDQLKDANVWKILMNLLDSNTSFDQAFTG 401
P + K + ++ ++ KA + + Q D ++ +L + ++ F
Sbjct: 540 GPIVMNKYNQTLQWLASGLSDSTKAIDALETIKQFNDERIFYLLNACVTNDIPFLTFKNC 599
Query: 402 RDDLLKIL-------------GAKHRLYDF---LSTLSMKCSYLLFNKEHVKEILLEVAA 445
++L+ L GA D + L + S +++N ++ +LL ++
Sbjct: 600 YNELVSKLQTPGLFKKYNISTGASIMPRDIAKVIQILLFRASPIIYNVSNI-SVLLNLS- 657
Query: 446 QKSSANAQFMQSCMDILGILARFSPLLLGGTEEELVNLLK-------EENEIIK-EGILH 497
++++A+ + IL +++ +P L L ++K E+N+ + E L
Sbjct: 658 --NNSDAKQLDLKRRILDDISKVNPTLFKDQIRTLKTIIKDLDDPDAEKNDNLSLEEALK 715
Query: 498 VLAKAGGTIREQLAATSSSVDLLLERLCLEGSRRQAKYAVHALAAITK-DDGLKSLSVLY 556
L KA T+++Q+ + L +E KYA +A K ++ LK + +
Sbjct: 716 TLYKASKTLKDQVDFDDTFFFTKLYDFAVESKPEITKYATKLIALSPKAEETLKKIKI-- 773
Query: 557 KRLVDM-LEEKTHLPAVLQSLGCIAQTAMPVFETRESEIEEFIKSKILRCSNKIRNDTK- 614
R++ + L++ + + + L I + V ++I ++ ++L SN++ D+K
Sbjct: 774 -RILPLDLQKDKYFTSHIIVLMEIFKKFPHVLNDDSTDIISYLIKEVL-LSNQVVGDSKK 831
Query: 615 -ACWDDRSELCLLKIYGI--KTLVKSYLPVKDAHIRPGI--DDLLG---------ILKSM 660
W + S L K I K K I P + D+L +
Sbjct: 832 EIDWVEDSLLSDTKYSAIGNKVFTLKLFTNKLRSIAPDVPRDELAESFTEKTMKLFFYLI 891
Query: 661 LSYGEM-----SEDIESSSVDKAHLRLASAKAVLRLSR--QWDHKI-PVDVFHLTLRTPE 712
S GE+ E + S + LR + VL+L+R ++ I P D+ L +
Sbjct: 892 ASGGELISEFNKEFYPTPSNYQTKLRCVAGIQVLKLARISNLNNFIKPSDIIKLINLVED 951
Query: 713 ISFPQAKKLFLSKVHQYVKDRLLDAKYACAFLFGITESKSPEFEEEKQNLADIIQMHHQM 772
S P +K FL ++ YV + L+ K+ F E P+ E +
Sbjct: 952 ESLP-VRKTFLEQLKDYVANELISIKFLPLVFFTAYE---PDVELKTTT----------- 996
Query: 773 KARQISVQSDANSF--ATYPEYIIPYLVHTFAHHSCPDI 809
I+ SF T E +P L+H AHH PDI
Sbjct: 997 -KIWINFTFGLKSFKKGTIFERALPRLIHAIAHH--PDI 1032
>sp|O04716|MSH6_ARATH DNA mismatch repair protein MSH6 OS=Arabidopsis thaliana GN=MSH6 PE=1
SV=2
Length = 1324
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 41/55 (74%)
Query: 1207 EDLIGYRIKVWWPMDKQFYEGTIKSYDPIKKKHVILYDDEDVEVLRLDKERWELL 1261
++++G +++V+WP+DK++Y+G++ YD + KHV+ Y+D + E L L KE+ E +
Sbjct: 122 DEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWV 176
>sp|Q9ZUM0|C3H17_ARATH Zinc finger CCCH domain-containing protein 17 OS=Arabidopsis thaliana
GN=At2g02160 PE=1 SV=1
Length = 669
Score = 37.4 bits (85), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 1281 LIQVSSGKKNKLSGGARQNKKSMKDKGKRTPKKSL---KDRPKFASKSYFSEDEDSEK-T 1336
L + SG + + G ++ M+D+ K PK S K P + F ED S K +
Sbjct: 460 LEENHSGNQERGFGAPWARRREMEDERKSAPKSSREESKPEPSLGKRKSFEEDHHSHKRS 519
Query: 1337 DVSDPKPTTVSKVLE-TNSGDSQGKRADMEDENLTDKEESDKEFKLISEER 1386
S P S++L+ + S G R + +DE ++ KEE+ E KLI+EE+
Sbjct: 520 RDSFAAPLPFSEILKRKKAAASGGSRNNNKDETIS-KEEAGDEIKLITEEK 569
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 553,753,583
Number of Sequences: 539616
Number of extensions: 24617402
Number of successful extensions: 141191
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 2621
Number of HSP's that attempted gapping in prelim test: 88469
Number of HSP's gapped (non-prelim): 23524
length of query: 1508
length of database: 191,569,459
effective HSP length: 131
effective length of query: 1377
effective length of database: 120,879,763
effective search space: 166451433651
effective search space used: 166451433651
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)