BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000442
(1507 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/1118 (37%), Positives = 606/1118 (54%), Gaps = 93/1118 (8%)
Query: 1 MAAPVGLVVGSIVWTEDPEEAWIDGEV---EEVNDEDIKIACTSGKTVVAKASNVYPKDP 57
MAA + VW DPEE W E+ + D+ +++ GK + + PK
Sbjct: 1 MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDL---EYCLDPKTK 57
Query: 58 EFPQ-------CGVDDMTKLAYLHEPGVLQNLRCRY-DVNEIYTYTGNILIAVNPFRRLP 109
E P G +D+T L+YLHEP VL NL+ R+ D IYTY G +L+A+NP+ +LP
Sbjct: 58 ELPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP 117
Query: 110 HLYDNHMMEQYKGASLGELSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKML 169
+Y ++ Y G ++G++ PH FA+A+ AY+ M + +QSI+VSGESGAGKT S K
Sbjct: 118 -IYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYA 176
Query: 170 MQYLAYMGGRTATEKQSVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRI 229
M+Y A + G +A+E +VE++VL SNP++E+ GNAKT RN+NSSRFGK++E+ FD+R RI
Sbjct: 177 MRYFATVSG-SASE-ANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRI 234
Query: 230 SGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAGPA-EDIEKYKLGNPRMFHYLNQSNFY 288
GA +RTYLLE+SRV ++ ERNYH FY LCA A + + +LGN FHY Q
Sbjct: 235 IGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSP 294
Query: 289 ELDGVDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDE 348
+DG+D++KE V TR+A ++GI+ Q IFR++A ILHLGNVEFA + + P
Sbjct: 295 VIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKH 354
Query: 349 KSRSHLKTAAELFMCDEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRL 408
L +L D + + +C R + T E+ K K +Y+ L
Sbjct: 355 DP---LTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANL 411
Query: 409 FDWLVNKINNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFK 468
F+W+V+ +N + IGVLDIYGFE+F+ NSFEQFCIN NEKLQQ FN HVFK
Sbjct: 412 FNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFK 471
Query: 469 MEQEEYTREEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQT 528
+EQEEY +E+I W+ I+F DNQ ++LIE K G++ LLDE C P+ + +T+AQKLY T
Sbjct: 472 LEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNT 530
Query: 529 FKDH-KRFSKPKLSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVL-SASGCPFVS 586
+ F KP+LS F I H+A V YQ E FL+KNKD V E VL S+ +
Sbjct: 531 HLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLP 590
Query: 587 GLFP-----------------PLTEEXXXXXXXXXXXXXXXQQ----------LQALLET 619
LF PL+ + L L+ET
Sbjct: 591 ELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMET 650
Query: 620 LSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSR 679
L+AT PHY+RC+KPN+ P F+ +QQLR GVLE IRIS AG+P+R + EF SR
Sbjct: 651 LNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSR 710
Query: 680 FRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFLRAGQMAELDSRRTQVLGQ 737
+R+L K D D CK +L+K+ L YQ GKTK+F RAGQ+A L+ R L
Sbjct: 711 YRVLM-KQKDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRA 769
Query: 738 SAIIIQSKVRSYFAHKRFNLLRCAAIQIQTLCRGQNGRYQYERMRREAASVKIQKYSRMC 797
+ I IQ +R + K++ +R AAI IQ RG R +RR A++ IQK+ RM
Sbjct: 770 ACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMY 829
Query: 798 LARKDYHKLRSSAISIQTGLRGMAAHNDLRLMKQTKAAIVIXXXXXXXXXXXXXXXMKKA 857
+ RK Y +R + I++Q LRG N ++M + +I+I KA
Sbjct: 830 VVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKA 889
Query: 858 AIVVQCAWRGKVARGELRKLKMAAKETGALQAAKSKLEKEVEELTWRLQ---------LE 908
+ +QC +R +A+ EL+KLK+ A+ + LE ++ +L ++ LE
Sbjct: 890 IVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLE 949
Query: 909 KRMRADLEEAKTQENAKLKSALQEMQQQFEETKTLLIKEREAAKKTTEALLIMEREAAE- 967
K +LE + E KL+S ++ ++ EE AK T +L ++ E A+
Sbjct: 950 K--MNNLEITYSTETEKLRSDVERLRMSEEE-----------AKNATNRVLSLQEEIAKL 996
Query: 968 -KEAVQVPVIREVPVIDHVMVNKLTAENEELKALVSSLEKKIDETERKFEETNKLSEERL 1026
KE Q E I+ +K E E+ LVS L+++ + + EE N+ ++
Sbjct: 997 RKELHQTQT--EKKTIEE-WADKYKHETEQ---LVSELKEQNTLLKTEKEELNRRIHDQA 1050
Query: 1027 KEALEA-ESKIIELKTCMQRLEEKLSDIETEDQILRHQ 1063
KE E E K++E E K +++ D+ LR+Q
Sbjct: 1051 KEITETMEKKLVE--------ETKQLELDLNDERLRYQ 1080
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 603 bits (1556), Expect = e-172, Method: Compositional matrix adjust.
Identities = 317/732 (43%), Positives = 466/732 (63%), Gaps = 20/732 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + G+ K + ++P +F GV+DM+
Sbjct: 35 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFD--GVEDMS 92
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 93 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 151
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 152 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 211
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 212 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQ 271
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM
Sbjct: 272 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAM 331
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 332 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 387
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 388 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA 447
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDIYGFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 448 -YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDF 506
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 507 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 566
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 567 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IR
Sbjct: 627 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR 686
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F
Sbjct: 687 ITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFF 746
Query: 720 RAGQMAELDSRR 731
RAGQ+A ++ R
Sbjct: 747 RAGQLARIEEAR 758
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 602 bits (1553), Expect = e-172, Method: Compositional matrix adjust.
Identities = 316/737 (42%), Positives = 466/737 (63%), Gaps = 18/737 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTK 69
I + DP+E ++ GE+ + G+ K + ++P GV+DM++
Sbjct: 46 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNP-IKFDGVEDMSE 104
Query: 70 LAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELS 129
L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E++
Sbjct: 105 LSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEVA 163
Query: 130 PHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV-E 188
PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V E
Sbjct: 164 PHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLE 223
Query: 189 QQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQVS 248
QQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV S
Sbjct: 224 QQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQS 283
Query: 249 DPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAME 307
+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM+
Sbjct: 284 ETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMD 343
Query: 308 VVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEKS 367
+VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 344 IVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPSV 399
Query: 368 LEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNSK 427
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 400 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA- 458
Query: 428 VLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF- 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 459 YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFG 518
Query: 487 IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLTD 544
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T+
Sbjct: 519 LDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTE 578
Query: 545 FTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXXX 602
F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 579 FGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANF 638
Query: 603 XXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRI 662
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IRI
Sbjct: 639 ITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRI 698
Query: 663 SCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFLR 720
+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F R
Sbjct: 699 TRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFR 758
Query: 721 AGQMAELDSRRTQVLGQ 737
AGQ+A ++ R Q + +
Sbjct: 759 AGQLARIEEAREQRISE 775
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 602 bits (1552), Expect = e-172, Method: Compositional matrix adjust.
Identities = 316/737 (42%), Positives = 466/737 (63%), Gaps = 18/737 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTK 69
I + DP+E ++ GE+ + G+ K + ++P GV+DM++
Sbjct: 46 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNP-IKFDGVEDMSE 104
Query: 70 LAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELS 129
L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E++
Sbjct: 105 LSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEVA 163
Query: 130 PHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV-E 188
PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V E
Sbjct: 164 PHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLE 223
Query: 189 QQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQVS 248
QQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV S
Sbjct: 224 QQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQS 283
Query: 249 DPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAME 307
+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM+
Sbjct: 284 ETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMD 343
Query: 308 VVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEKS 367
+VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 344 IVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPSV 399
Query: 368 LEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNSK 427
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 400 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA- 458
Query: 428 VLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF- 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 459 YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFG 518
Query: 487 IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLTD 544
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T+
Sbjct: 519 LDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTE 578
Query: 545 FTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXXX 602
F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 579 FGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANF 638
Query: 603 XXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRI 662
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IRI
Sbjct: 639 ITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRI 698
Query: 663 SCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFLR 720
+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F R
Sbjct: 699 TRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFR 758
Query: 721 AGQMAELDSRRTQVLGQ 737
AGQ+A ++ R Q + +
Sbjct: 759 AGQLARIEEAREQRISE 775
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 602 bits (1552), Expect = e-172, Method: Compositional matrix adjust.
Identities = 316/732 (43%), Positives = 466/732 (63%), Gaps = 20/732 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + G+ K + ++P +F GV+DM+
Sbjct: 35 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFD--GVEDMS 92
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 93 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 151
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 152 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 211
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 212 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQ 271
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM
Sbjct: 272 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAM 331
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 332 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 387
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 388 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA 447
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDIYGFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 448 -YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDF 506
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 507 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 566
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 567 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IR
Sbjct: 627 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR 686
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + ++ G TK+F
Sbjct: 687 ITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFF 746
Query: 720 RAGQMAELDSRR 731
RAGQ+A ++ R
Sbjct: 747 RAGQLARIEEAR 758
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 602 bits (1551), Expect = e-172, Method: Compositional matrix adjust.
Identities = 318/736 (43%), Positives = 467/736 (63%), Gaps = 20/736 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + G+ K + ++P +F GV+DM+
Sbjct: 34 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFD--GVEDMS 91
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 92 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 150
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 151 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 210
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 211 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQ 270
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM
Sbjct: 271 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAM 330
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 331 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 386
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 387 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA 446
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 447 -YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDF 505
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 506 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 565
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 566 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 625
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IR
Sbjct: 626 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR 685
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F
Sbjct: 686 ITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFF 745
Query: 720 RAGQMAELDSRRTQVL 735
RAGQ+A ++ R Q L
Sbjct: 746 RAGQLARIEEAREQRL 761
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 602 bits (1551), Expect = e-172, Method: Compositional matrix adjust.
Identities = 317/735 (43%), Positives = 465/735 (63%), Gaps = 18/735 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTK 69
I + DP+E ++ GE+ + G+ K + ++P GV+DM++
Sbjct: 46 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNP-IKFDGVEDMSE 104
Query: 70 LAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELS 129
L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E++
Sbjct: 105 LSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEVA 163
Query: 130 PHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV-E 188
PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V E
Sbjct: 164 PHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLE 223
Query: 189 QQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQVS 248
QQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV S
Sbjct: 224 QQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQS 283
Query: 249 DPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAME 307
+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM+
Sbjct: 284 ETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMD 343
Query: 308 VVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEKS 367
+VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 344 IVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPSV 399
Query: 368 LEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNSK 427
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 400 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA- 458
Query: 428 VLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF- 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 459 YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFG 518
Query: 487 IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLTD 544
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T+
Sbjct: 519 LDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTE 578
Query: 545 FTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXXX 602
F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 579 FGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANF 638
Query: 603 XXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRI 662
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IRI
Sbjct: 639 ITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRI 698
Query: 663 SCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFLR 720
+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F R
Sbjct: 699 TRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFR 758
Query: 721 AGQMAELDSRRTQVL 735
AGQ+A ++ R Q L
Sbjct: 759 AGQLARIEEAREQRL 773
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 601 bits (1550), Expect = e-172, Method: Compositional matrix adjust.
Identities = 317/735 (43%), Positives = 465/735 (63%), Gaps = 18/735 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTK 69
I + DP+E ++ GE+ + G+ K + ++P GV+DM++
Sbjct: 46 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNP-IKFDGVEDMSE 104
Query: 70 LAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELS 129
L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E++
Sbjct: 105 LSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEVA 163
Query: 130 PHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV-E 188
PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V E
Sbjct: 164 PHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLE 223
Query: 189 QQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQVS 248
QQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV S
Sbjct: 224 QQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQS 283
Query: 249 DPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAME 307
+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM+
Sbjct: 284 ETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMD 343
Query: 308 VVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEKS 367
+VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 344 IVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPSV 399
Query: 368 LEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNSK 427
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 400 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA- 458
Query: 428 VLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF- 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 459 YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFG 518
Query: 487 IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLTD 544
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T+
Sbjct: 519 LDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTE 578
Query: 545 FTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXXX 602
F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 579 FGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANF 638
Query: 603 XXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRI 662
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IRI
Sbjct: 639 ITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRI 698
Query: 663 SCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFLR 720
+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F R
Sbjct: 699 TRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFR 758
Query: 721 AGQMAELDSRRTQVL 735
AGQ+A ++ R Q L
Sbjct: 759 AGQLARIEEAREQRL 773
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 600 bits (1548), Expect = e-171, Method: Compositional matrix adjust.
Identities = 315/736 (42%), Positives = 462/736 (62%), Gaps = 18/736 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTK 69
I + DP+E ++ GE+ + G+ K + ++P GV+DM++
Sbjct: 35 IWYNPDPDERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNP-IKFDGVEDMSE 93
Query: 70 LAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELS 129
L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E++
Sbjct: 94 LSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEVA 152
Query: 130 PHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV-E 188
PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V E
Sbjct: 153 PHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLE 212
Query: 189 QQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQVS 248
QQ+L++NP+LEAFGNAKT RNNNSS FGKF+E+QF+ G ISGA+I++YLLE+SRV S
Sbjct: 213 QQILQANPILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQS 272
Query: 249 DPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAME 307
+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV + E+ TR+AM+
Sbjct: 273 ETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAMD 332
Query: 308 VVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEKS 367
+VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 333 IVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPSV 388
Query: 368 LEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNSK 427
LE ++ + I+ + + + K +Y RLF WLV KINN + + +
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSERKA- 447
Query: 428 VLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF- 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 448 YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFG 507
Query: 487 IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLTD 544
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T+
Sbjct: 508 LDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTE 567
Query: 545 FTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXXX 602
F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANF 627
Query: 603 XXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRI 662
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IRI
Sbjct: 628 ITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRI 687
Query: 663 SCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFLR 720
+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F R
Sbjct: 688 TRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFR 747
Query: 721 AGQMAELDSRRTQVLG 736
AGQ+A ++ R Q LG
Sbjct: 748 AGQLARIEEAREQRLG 763
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 600 bits (1548), Expect = e-171, Method: Compositional matrix adjust.
Identities = 316/732 (43%), Positives = 465/732 (63%), Gaps = 20/732 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + G+ K + ++P +F GV+DM+
Sbjct: 35 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFD--GVEDMS 92
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 93 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 151
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 152 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 211
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 212 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQ 271
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM
Sbjct: 272 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAM 331
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 332 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 387
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 388 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA 447
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 448 -YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDF 506
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 507 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 566
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 567 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IR
Sbjct: 627 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR 686
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F
Sbjct: 687 ITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFF 746
Query: 720 RAGQMAELDSRR 731
RAGQ+A ++ R
Sbjct: 747 RAGQLARIEEAR 758
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 600 bits (1546), Expect = e-171, Method: Compositional matrix adjust.
Identities = 316/732 (43%), Positives = 465/732 (63%), Gaps = 20/732 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + G+ K + ++P +F GV+DM+
Sbjct: 35 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFD--GVEDMS 92
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 93 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 151
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 152 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 211
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 212 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQ 271
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM
Sbjct: 272 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAM 331
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 332 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 387
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 388 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA 447
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 448 -YFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDF 506
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 507 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 566
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 567 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IR
Sbjct: 627 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR 686
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F
Sbjct: 687 ITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFF 746
Query: 720 RAGQMAELDSRR 731
RAGQ+A ++ R
Sbjct: 747 RAGQLARIEEAR 758
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 600 bits (1546), Expect = e-171, Method: Compositional matrix adjust.
Identities = 316/732 (43%), Positives = 465/732 (63%), Gaps = 20/732 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + G+ K + ++P +F GV+DM+
Sbjct: 35 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFD--GVEDMS 92
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 93 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 151
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 152 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 211
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 212 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQ 271
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM
Sbjct: 272 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAM 331
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 332 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 387
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 388 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA 447
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 448 -YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDF 506
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 507 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 566
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 567 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IR
Sbjct: 627 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR 686
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F
Sbjct: 687 ITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFF 746
Query: 720 RAGQMAELDSRR 731
RAGQ+A ++ R
Sbjct: 747 RAGQLARIEEAR 758
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 599 bits (1545), Expect = e-171, Method: Compositional matrix adjust.
Identities = 316/732 (43%), Positives = 465/732 (63%), Gaps = 20/732 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + G+ K + ++P +F GV+DM+
Sbjct: 35 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFD--GVEDMS 92
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 93 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 151
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 152 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 211
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 212 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQ 271
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM
Sbjct: 272 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAM 331
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 332 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 387
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 388 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA 447
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 448 -YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDF 506
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 507 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 566
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 567 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IR
Sbjct: 627 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR 686
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F
Sbjct: 687 ITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFF 746
Query: 720 RAGQMAELDSRR 731
RAGQ+A ++ R
Sbjct: 747 RAGQLARIEEAR 758
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 599 bits (1544), Expect = e-171, Method: Compositional matrix adjust.
Identities = 315/732 (43%), Positives = 466/732 (63%), Gaps = 20/732 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + + G+ K + ++P +F GV+DM+
Sbjct: 35 IWYNPDPKERDSYECGEIVSETSDSFTFKTSDGQDRQVKKDDANQRNPIKFD--GVEDMS 92
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 93 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 151
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 152 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 211
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 212 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQ 271
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM
Sbjct: 272 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAM 331
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 332 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 387
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 388 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA 447
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 448 -YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDF 506
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 507 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 566
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 567 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IR
Sbjct: 627 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR 686
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + ++ G TK+F
Sbjct: 687 ITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFF 746
Query: 720 RAGQMAELDSRR 731
RAGQ+A ++ R
Sbjct: 747 RAGQLARIEEAR 758
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 598 bits (1543), Expect = e-171, Method: Compositional matrix adjust.
Identities = 315/732 (43%), Positives = 465/732 (63%), Gaps = 20/732 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + G+ K + ++P +F GV+DM+
Sbjct: 35 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFD--GVEDMS 92
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 93 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 151
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 152 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 211
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNN+SRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 212 EQQILQANPILEAFGNAKTTRNNNASRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQ 271
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM
Sbjct: 272 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAM 331
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 332 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 387
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 388 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA 447
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 448 -YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDF 506
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 507 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 566
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 567 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IR
Sbjct: 627 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR 686
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F
Sbjct: 687 ITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFF 746
Query: 720 RAGQMAELDSRR 731
RAGQ+A ++ R
Sbjct: 747 RAGQLARIEEAR 758
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 598 bits (1542), Expect = e-171, Method: Compositional matrix adjust.
Identities = 315/732 (43%), Positives = 464/732 (63%), Gaps = 20/732 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + G+ K + ++P +F GV+DM+
Sbjct: 34 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFD--GVEDMS 91
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 92 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 150
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 151 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 210
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 211 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQ 270
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM
Sbjct: 271 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAM 330
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 331 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 386
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 387 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA 446
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 447 -YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDF 505
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 506 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 565
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 566 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 625
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC VLE IR
Sbjct: 626 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNAVLEGIR 685
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F
Sbjct: 686 ITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFF 745
Query: 720 RAGQMAELDSRR 731
RAGQ+A ++ R
Sbjct: 746 RAGQLARIEEAR 757
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 597 bits (1539), Expect = e-170, Method: Compositional matrix adjust.
Identities = 313/731 (42%), Positives = 463/731 (63%), Gaps = 18/731 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTK 69
I + DP+E ++ GE+ + G+ K + ++P GV+DM++
Sbjct: 35 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNP-IKFDGVEDMSE 93
Query: 70 LAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELS 129
L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E++
Sbjct: 94 LSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEVA 152
Query: 130 PHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV-E 188
PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V E
Sbjct: 153 PHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLE 212
Query: 189 QQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQVS 248
QQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV S
Sbjct: 213 QQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQS 272
Query: 249 DPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAME 307
+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM+
Sbjct: 273 ETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMD 332
Query: 308 VVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEKS 367
+VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 333 IVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPSV 388
Query: 368 LEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNSK 427
LE ++ + I+ + + + K +Y RLF WLV KINN + ++ +
Sbjct: 389 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCEERKA- 447
Query: 428 VLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF- 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 448 YFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFG 507
Query: 487 IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLTD 544
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T+
Sbjct: 508 LDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTE 567
Query: 545 FTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXXX 602
F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 568 FGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANF 627
Query: 603 XXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRI 662
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IRI
Sbjct: 628 ITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRI 687
Query: 663 SCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFLR 720
+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + ++ G TK+F R
Sbjct: 688 TRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFFR 747
Query: 721 AGQMAELDSRR 731
AGQ+A ++ R
Sbjct: 748 AGQLARIEEAR 758
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 597 bits (1538), Expect = e-170, Method: Compositional matrix adjust.
Identities = 316/735 (42%), Positives = 464/735 (63%), Gaps = 18/735 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTK 69
I + DP+E ++ GE+ + G+ K + ++P GV+DM++
Sbjct: 34 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNP-IKFDGVEDMSE 92
Query: 70 LAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELS 129
L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+ +P +Y M++ +KG E++
Sbjct: 93 LSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKIIP-IYTQEMVDIFKGRRRNEVA 151
Query: 130 PHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV-E 188
PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V E
Sbjct: 152 PHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVLE 211
Query: 189 QQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQVS 248
QQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV S
Sbjct: 212 QQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQS 271
Query: 249 DPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAME 307
+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM+
Sbjct: 272 ETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMD 331
Query: 308 VVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEKS 367
+VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 332 IVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPSV 387
Query: 368 LEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNSK 427
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 388 LEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLCQERKA- 446
Query: 428 VLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF- 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 447 YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFG 506
Query: 487 IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLTD 544
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T+
Sbjct: 507 LDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKTE 566
Query: 545 FTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXXX 602
F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 567 FGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGANF 626
Query: 603 XXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRI 662
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IRI
Sbjct: 627 ITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRI 686
Query: 663 SCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFLR 720
+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F R
Sbjct: 687 TRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFFR 746
Query: 721 AGQMAELDSRRTQVL 735
AGQ+A ++ R Q L
Sbjct: 747 AGQLARIEEAREQRL 761
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 596 bits (1537), Expect = e-170, Method: Compositional matrix adjust.
Identities = 315/732 (43%), Positives = 464/732 (63%), Gaps = 20/732 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + G+ K + ++P +F GV+DM+
Sbjct: 34 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFD--GVEDMS 91
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 92 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 150
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 151 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 210
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 211 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQ 270
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM
Sbjct: 271 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAM 330
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 331 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 386
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 387 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA 446
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 447 -YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDF 505
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 506 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 565
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 566 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 625
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC VLE IR
Sbjct: 626 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNVVLEGIR 685
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F
Sbjct: 686 ITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFF 745
Query: 720 RAGQMAELDSRR 731
RAGQ+A ++ R
Sbjct: 746 RAGQLARIEEAR 757
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 596 bits (1536), Expect = e-170, Method: Compositional matrix adjust.
Identities = 314/732 (42%), Positives = 462/732 (63%), Gaps = 20/732 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + G+ K + ++P +F GV+DM+
Sbjct: 35 IWYNPDPDERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFD--GVEDMS 92
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 93 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 151
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 152 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 211
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 212 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQ 271
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV + E+ TR+AM
Sbjct: 272 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAM 331
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 332 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 387
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + + +
Sbjct: 388 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSE-RA 446
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 447 AYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDF 506
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 507 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 566
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 567 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IR
Sbjct: 627 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR 686
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ +LAP V + D A +L+ +N+ + Y+ G TK+F
Sbjct: 687 ITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFGITKIFF 746
Query: 720 RAGQMAELDSRR 731
RAGQ+A ++ R
Sbjct: 747 RAGQLARIEEAR 758
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 592 bits (1526), Expect = e-169, Method: Compositional matrix adjust.
Identities = 314/732 (42%), Positives = 462/732 (63%), Gaps = 20/732 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + + G+ K + ++P +F GV+DM+
Sbjct: 35 IWYNPDPKERDSYECGEIVSETSDSFTFKTSDGQDRQVKKDDANQRNPIKFD--GVEDMS 92
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 93 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 151
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 152 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 211
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 212 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQ 271
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S ERNYH FY L AG AE+ + L P F+YLNQS ++ GV + E+ TR+AM
Sbjct: 272 STTERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAM 331
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 332 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 387
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + + +
Sbjct: 388 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSERKA 447
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 448 -YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDF 506
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 507 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 566
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 567 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLEAIR
Sbjct: 627 FLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEAIR 686
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ LAP V + D A +L+ +N+ + ++ G TK+F
Sbjct: 687 ITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFF 746
Query: 720 RAGQMAELDSRR 731
RAGQ+A ++ R
Sbjct: 747 RAGQLARIEEAR 758
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 591 bits (1524), Expect = e-169, Method: Compositional matrix adjust.
Identities = 313/732 (42%), Positives = 462/732 (63%), Gaps = 20/732 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + + G+ K + ++P +F GV+DM+
Sbjct: 35 IWYNPDPKERDSYECGEIVSETSDSFTFKTSDGQDRQVKKDDANQRNPIKFD--GVEDMS 92
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 93 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 151
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 152 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 211
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 212 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQ 271
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S ERNYH FY L AG AE+ + L P F+YLNQS ++ GV + +E+ TR+AM
Sbjct: 272 STTERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEEEFKITRQAM 331
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 332 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 387
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + + +
Sbjct: 388 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSERKA 447
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 448 -YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDF 506
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 507 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 566
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 567 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IR
Sbjct: 627 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR 686
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ LAP V + D A +L+ +N+ + ++ G TK+F
Sbjct: 687 ITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFF 746
Query: 720 RAGQMAELDSRR 731
RAGQ+A ++ R
Sbjct: 747 RAGQLARIEEAR 758
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 589 bits (1519), Expect = e-168, Method: Compositional matrix adjust.
Identities = 312/732 (42%), Positives = 461/732 (62%), Gaps = 20/732 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + + G+ K + ++P +F GV+DM+
Sbjct: 35 IWYNPDPKERDSYECGEIVSETSDSFTFKTSDGQDRQVKKDDANQRNPIKFD--GVEDMS 92
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 93 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 151
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 152 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 211
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 212 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQ 271
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S ERNYH FY L AG AE+ + L P F+YLNQS ++ GV + E+ TR+AM
Sbjct: 272 STSERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFKITRQAM 331
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 332 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 387
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + + +
Sbjct: 388 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSERKA 447
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQE+Y +E+I+W++I+F
Sbjct: 448 -YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEKYLKEKINWTFIDF 506
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 507 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 566
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 567 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IR
Sbjct: 627 FLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR 686
Query: 662 ISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFL 719
I+ G+P R ++ +F+ R+ LAP V + D A +L+ +N+ + ++ G TK+F
Sbjct: 687 ITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFGITKIFF 746
Query: 720 RAGQMAELDSRR 731
RAGQ+A ++ R
Sbjct: 747 RAGQLARIEEAR 758
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 588 bits (1517), Expect = e-168, Method: Compositional matrix adjust.
Identities = 332/790 (42%), Positives = 457/790 (57%), Gaps = 54/790 (6%)
Query: 13 VWTEDPEEAWIDGEV---EEVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQ-------C 62
VW DPEE W E+ + D+ +++ GK + + PK E P
Sbjct: 13 VWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDL---EYCLDPKTKELPPLRNPDILV 69
Query: 63 GVDDMTKLAYLHEPGVLQNLRCRY-DVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYK 121
G +D+T L+YLHEP VL NL+ R+ D IYTY G +L+A+NP+ +LP +Y ++ Y
Sbjct: 70 GENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINAYS 128
Query: 122 GASLGELSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTA 181
G ++G++ PH FA+A+ AY+ M + +QSI+VSGESGAGKT S K M+Y A + G +A
Sbjct: 129 GQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSG-SA 187
Query: 182 TEKQSVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLER 241
+E +VE++VL SNP++E+ GNAKT RN+NSSRFGK++E+ FD+R RI GA +RTYLLE+
Sbjct: 188 SE-ANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEK 246
Query: 242 SRVCQVSDPERNYHCFYMLCAGPA-EDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYV 300
SRV ++ ERNYH FY LCA A + + +LGN FHY Q +DG+D++KE V
Sbjct: 247 SRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMV 306
Query: 301 KTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAEL 360
TR+A ++GI+ Q IFR++A ILHLGNVEFA + + P L +L
Sbjct: 307 NTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDP---LTIFCDL 363
Query: 361 FMCDEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTI 420
D + + +C R + T E+ K K +Y+ LF+W+V+ +N +
Sbjct: 364 MGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKAL 423
Query: 421 GQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEID 480
IGVLDIYGFE+F+ NSFEQFCIN NEKLQQ FN HVFK+EQEEY +E+I
Sbjct: 424 HSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIP 483
Query: 481 WSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDH-KRFSKPK 539
W+ I+F DNQ ++LIE K G++ LLDE C P+ + +T+AQKLY T + F KP+
Sbjct: 484 WTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPR 542
Query: 540 LSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVL-SASGCPFVSGLFP-------- 590
LS F I H+A V YQ E FL+KNKD V E VL S+ + LF
Sbjct: 543 LSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISP 602
Query: 591 ---------PLTEEXXXXXXXXXXXXXXXQQ----------LQALLETLSATEPHYIRCV 631
PL+ + L L+ETL+AT PHY+RC+
Sbjct: 603 TSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCI 662
Query: 632 KPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVFDGS 691
KPN+ P F+ +QQLR GVLE IRIS AG+P+R + EF SR+R+L K D
Sbjct: 663 KPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLM-KQKDVL 721
Query: 692 CDEVTACKRLLQKVNL--KGYQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQSKVRSY 749
D CK +L+K+ L YQ GKTK+F RAGQ+A L+ R L + I IQ +R +
Sbjct: 722 SDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGW 781
Query: 750 FAHKRFNLLR 759
K++ +R
Sbjct: 782 LMRKKYMRMR 791
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 576 bits (1484), Expect = e-164, Method: Compositional matrix adjust.
Identities = 323/762 (42%), Positives = 442/762 (58%), Gaps = 54/762 (7%)
Query: 13 VWTEDPEEAWIDGEV---EEVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQ-------C 62
VW DPEE W E+ + D+ +++ GK + + PK E P
Sbjct: 13 VWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDL---EYCLDPKTKELPPLRNPDILV 69
Query: 63 GVDDMTKLAYLHEPGVLQNLRCRY-DVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYK 121
G +D+T L+YLHEP VL NL+ R+ D IYTY G +L+A+NP+ +LP +Y ++ Y
Sbjct: 70 GENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINAYS 128
Query: 122 GASLGELSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTA 181
G ++G++ PH FA+A+ AY+ M + +QSI+VSGESGAGKT S K M+Y A + G +
Sbjct: 129 GQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSG--S 186
Query: 182 TEKQSVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLER 241
+ +VE++VL SNP++E+ GNAKT RN+NSSRFGK++E+ FD+R RI GA +RTYLLE+
Sbjct: 187 ASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEK 246
Query: 242 SRVCQVSDPERNYHCFYMLCAGPA-EDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYV 300
SRV ++ ERNYH FY LCA A + + +LGN FHY Q +DG+D++KE V
Sbjct: 247 SRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGIDDAKEMV 306
Query: 301 KTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAEL 360
TR+A ++GI+ Q IFR++A ILHLGNVEFA + + P L +L
Sbjct: 307 NTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDP---LTIFCDL 363
Query: 361 FMCDEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTI 420
D + + +C R + T E+ K K +Y+ LF+W+V+ +N +
Sbjct: 364 MGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKAL 423
Query: 421 GQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEID 480
IGVLDIYGFE+F+ NSFEQFCIN NEKLQQ FN HVFK+EQEEY +E+I
Sbjct: 424 HSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIP 483
Query: 481 WSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDH-KRFSKPK 539
W+ I+F DNQ ++LIE K G++ LLDE C P+ + +T+AQKLY T + F KP+
Sbjct: 484 WTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPR 542
Query: 540 LSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVL-SASGCPFVSGLFP-------- 590
LS F I H+A V YQ E FL+KNKD V E VL S+ + LF
Sbjct: 543 LSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKAISP 602
Query: 591 ---------PLTEEXXXXXXXXXXXXXXXQQ----------LQALLETLSATEPHYIRCV 631
PL+ + L L+ETL+AT PHY+RC+
Sbjct: 603 TSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCI 662
Query: 632 KPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVFDGS 691
KPN+ P F+ +QQLR GVLE IRIS AG+P+R + EF SR+R+L K D
Sbjct: 663 KPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLM-KQKDVL 721
Query: 692 CDEVTACKRLLQKVNL--KGYQIGKTKVFLRAGQMAELDSRR 731
D CK +L+K+ L YQ GKTK+F RAGQ+A L+ R
Sbjct: 722 SDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIR 763
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 563 bits (1451), Expect = e-160, Method: Compositional matrix adjust.
Identities = 295/667 (44%), Positives = 427/667 (64%), Gaps = 18/667 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + G+ K + ++P +F GV+DM+
Sbjct: 34 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFD--GVEDMS 91
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+R+P +Y M++ +KG E+
Sbjct: 92 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKGRRRNEV 150
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 151 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 210
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 211 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQ 270
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM
Sbjct: 271 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAM 330
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 331 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 386
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 387 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQERKA 446
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDIYGFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 447 -YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDF 505
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 506 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 565
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 566 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 625
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IR
Sbjct: 626 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR 685
Query: 662 ISCAGYP 668
I+ G+P
Sbjct: 686 ITRKGFP 692
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 557 bits (1436), Expect = e-158, Method: Compositional matrix adjust.
Identities = 294/669 (43%), Positives = 426/669 (63%), Gaps = 18/669 (2%)
Query: 12 IVWTEDPEE--AWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDP-EFPQCGVDDMT 68
I + DP+E ++ GE+ + G+ K + ++P +F GV+DM+
Sbjct: 34 IWYNPDPKERDSYECGEIVSETSDSFTFKTVDGQDRQVKKDDANQRNPIKFD--GVEDMS 91
Query: 69 KLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGEL 128
+L+YL+EP V NLR RY+ + IYTY+G L+AVNPF+ +P +Y M++ +KG E+
Sbjct: 92 ELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKIIP-IYTQEMVDIFKGRRRNEV 150
Query: 129 SPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV- 187
+PH FAI+D AYR M+++ +QS+L++GESGAGKTE+TK ++QYLA + GR V
Sbjct: 151 APHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQANGSGVL 210
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA+I++YLLE+SRV
Sbjct: 211 EQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEKSRVVFQ 270
Query: 248 SDPERNYHCFYMLCAGP-AEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
S+ ERNYH FY L AG AE+ + L P F+YLNQS ++ GV +S+E+ TR+AM
Sbjct: 271 SETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAM 330
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
++VG + +EQ +IF+++A ILHLGN++F KG + E K ++ L A+ +F +
Sbjct: 331 DIVGFSQEEQMSIFKIIAGILHLGNIKFEKG----AGEGAVLKDKTALNAASTVFGVNPS 386
Query: 367 SLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQDPNS 426
LE ++ + I+ + + + K +Y RLF WLV KINN + Q+ +
Sbjct: 387 VLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVLCQERKA 446
Query: 427 KVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEF 486
IGVLDI GFE FK NSFEQ CIN TNEKLQQ FN H+FK+EQEEY +E+I+W++I+F
Sbjct: 447 -YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDF 505
Query: 487 -IDNQDVLDLIE-KKPGGIIALLDEACMFPRSTHETFAQKLYQTF-KDHKRFSKPKLSLT 543
+D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K + ++ +P+ S T
Sbjct: 506 GLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEEPRFSKT 565
Query: 544 DFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF--PPLTEEXXXXXX 601
+F + HYAG V Y+ + +L+KNKD + + + S V+ LF P +
Sbjct: 566 EFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 625
Query: 602 XXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIR 661
+QL +L+ TL T PH++RC+ PNN P+ E+ VL QLRC GVLE IR
Sbjct: 626 FITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR 685
Query: 662 ISCAGYPTR 670
I+ G+P R
Sbjct: 686 ITRKGFPNR 694
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 515 bits (1327), Expect = e-146, Method: Compositional matrix adjust.
Identities = 293/792 (36%), Positives = 445/792 (56%), Gaps = 48/792 (6%)
Query: 14 WTEDPEEAWIDGEVEEVNDEDI--KIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTKLA 71
W D +E + E++ ++I KI S V K P+F + ++DM +
Sbjct: 35 WVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEK--LEDMANMT 92
Query: 72 YLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSPH 131
YL+E VL NLR RY IYTY+G IAVNP+RRLP +Y + ++ +Y+G E+ PH
Sbjct: 93 YLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPH 151
Query: 132 PFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMG------GRTATEKQ 185
F++AD+AY+ M+ + +QS L++GESGAGKTE+TK ++ YLA + A++K+
Sbjct: 152 LFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKK 211
Query: 186 --SVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSR 243
S+E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA I TYLLE+SR
Sbjct: 212 EGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSR 271
Query: 244 VCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPR--MFHYLNQSNFYELDGVDESKEYVK 301
V ERNYH FY +C+ ++ L P ++ ++NQ +D +D+ +E+
Sbjct: 272 VTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQGCL-TVDNIDDVEEFKL 330
Query: 302 TRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAE-- 359
+A +++G +E+ ++F+ A+ILH+G ++F + P++E++ S AE
Sbjct: 331 CDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQ-------RPREEQAESDGTAEAEKV 383
Query: 360 LFMC--DEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKIN 417
F+C + L ++ K + E +TK K +Y R+F+WLV ++N
Sbjct: 384 AFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVN 443
Query: 418 NTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTRE 477
T+ IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY +E
Sbjct: 444 KTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKE 503
Query: 478 EIDWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDHKRF- 535
I W +I+F +D Q +DLIE KP GI+++L+E CMFP++ ++F KLYQ R
Sbjct: 504 GIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMF 562
Query: 536 ------SKPKLSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF 589
++P F + HYAG+V Y +L+KNKD + A+L AS P V+ LF
Sbjct: 563 TKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELF 622
Query: 590 PPLTEEXXXXXXXXXXXXXXXQQLQA--------LLETLSATEPHYIRCVKPNNVLKPSI 641
EE Q + A L++ L +T PH++RC+ PN + +P +
Sbjct: 623 KA-PEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGL 681
Query: 642 FENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVF-DGSCDEVTACKR 700
+ VL QL+C GVLE IRI G+P+R ++ EF R+ ILAP G D T ++
Sbjct: 682 VDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEK 741
Query: 701 LLQKVNLKG--YQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQSKVRSYFAHKRFNLL 758
+L + + Y++G TKVF +AG + L+ R + L + + Q+ +R Y K + L
Sbjct: 742 ILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKL 801
Query: 759 RCAAIQIQTLCR 770
+ I + + R
Sbjct: 802 QDQRIGLSVIQR 813
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 515 bits (1327), Expect = e-146, Method: Compositional matrix adjust.
Identities = 291/791 (36%), Positives = 443/791 (56%), Gaps = 46/791 (5%)
Query: 14 WTEDPEEAWIDGEVEEVNDEDI--KIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTKLA 71
W D +E + E++ ++I KI S V K P+F + ++DM +
Sbjct: 30 WVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEK--LEDMANMT 87
Query: 72 YLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSPH 131
YL+E VL NLR RY IYTY+G IAVNP+RRLP +Y + ++ +Y+G E+ PH
Sbjct: 88 YLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPH 146
Query: 132 PFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMG------GRTATEKQ 185
F++AD+AY+ M+ + +QS L++GESGAGKTE+TK ++ YLA + A++K+
Sbjct: 147 LFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKK 206
Query: 186 --SVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSR 243
S+E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA I TYLLE+SR
Sbjct: 207 EGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSR 266
Query: 244 VCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPR--MFHYLNQSNFYELDGVDESKEYVK 301
V ERNYH FY +C+ ++ L P ++ ++NQ +D +D+ +E+
Sbjct: 267 VTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQGCL-TVDNIDDVEEFKL 325
Query: 302 TRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAE-- 359
+A +++G +E+ ++F+ A+ILH+G ++F + P++E++ S AE
Sbjct: 326 CDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQ-------RPREEQAESDGTAEAEKV 378
Query: 360 LFMC--DEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKIN 417
F+C + L ++ K + E +TK K +Y R+F+WLV ++N
Sbjct: 379 AFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVN 438
Query: 418 NTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTRE 477
T+ IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY +E
Sbjct: 439 KTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKE 498
Query: 478 EIDWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDHKRF- 535
I W +I+F +D Q +DLIE KP GI+++L+E CMFP++ ++F KLYQ R
Sbjct: 499 GIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMF 557
Query: 536 ------SKPKLSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF 589
++P F + HYAG+V Y +L+KNKD + A+L AS P V+ LF
Sbjct: 558 TKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELF 617
Query: 590 PPLTEEX-------XXXXXXXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIF 642
E + L L++ L +T PH++RC+ PN + +P +
Sbjct: 618 KAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLV 677
Query: 643 ENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVF-DGSCDEVTACKRL 701
+ VL QL+C GVLE IRI G+P+R ++ EF R+ ILAP G D T +++
Sbjct: 678 DAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKI 737
Query: 702 LQKVNLKG--YQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQSKVRSYFAHKRFNLLR 759
L + + Y++G TKVF +AG + L+ R + L + + Q+ +R Y K + L+
Sbjct: 738 LAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQ 797
Query: 760 CAAIQIQTLCR 770
I + + R
Sbjct: 798 DQRIGLSVIQR 808
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 515 bits (1326), Expect = e-146, Method: Compositional matrix adjust.
Identities = 293/792 (36%), Positives = 445/792 (56%), Gaps = 48/792 (6%)
Query: 14 WTEDPEEAWIDGEVEEVNDEDI--KIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTKLA 71
W D +E + E++ ++I KI S V K P+F + ++DM +
Sbjct: 35 WVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEK--LEDMANMT 92
Query: 72 YLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSPH 131
YL+E VL NLR RY IYTY+G IAVNP+RRLP +Y + ++ +Y+G E+ PH
Sbjct: 93 YLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPH 151
Query: 132 PFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMG------GRTATEKQ 185
F++AD+AY+ M+ + +QS L++GESGAGKTE+TK ++ YLA + A++K+
Sbjct: 152 LFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKK 211
Query: 186 --SVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSR 243
S+E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA I TYLLE+SR
Sbjct: 212 EGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSR 271
Query: 244 VCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPR--MFHYLNQSNFYELDGVDESKEYVK 301
V ERNYH FY +C+ ++ L P ++ ++NQ +D +D+ +E+
Sbjct: 272 VTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQGCL-TVDNIDDVEEFKL 330
Query: 302 TRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAE-- 359
+A +++G +E+ ++F+ A+ILH+G ++F + P++E++ S AE
Sbjct: 331 CDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQ-------RPREEQAESDGTAEAEKV 383
Query: 360 LFMC--DEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKIN 417
F+C + L ++ K + E +TK K +Y R+F+WLV ++N
Sbjct: 384 AFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVN 443
Query: 418 NTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTRE 477
T+ IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY +E
Sbjct: 444 KTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKE 503
Query: 478 EIDWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDHKRF- 535
I W +I+F +D Q +DLIE KP GI+++L+E CMFP++ ++F KLYQ R
Sbjct: 504 GIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMF 562
Query: 536 ------SKPKLSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF 589
++P F + HYAG+V Y +L+KNKD + A+L AS P V+ LF
Sbjct: 563 TKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELF 622
Query: 590 PPLTEEXXXXXXXXXXXXXXXQQLQA--------LLETLSATEPHYIRCVKPNNVLKPSI 641
EE Q + A L++ L +T PH++RC+ PN + +P +
Sbjct: 623 KA-PEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGL 681
Query: 642 FENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVF-DGSCDEVTACKR 700
+ VL QL+C GVLE IRI G+P+R ++ EF R+ ILAP G D T ++
Sbjct: 682 VDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEK 741
Query: 701 LLQKVNLKG--YQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQSKVRSYFAHKRFNLL 758
+L + + Y++G TKVF +AG + L+ R + L + + Q+ +R Y K + L
Sbjct: 742 ILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKL 801
Query: 759 RCAAIQIQTLCR 770
+ I + + R
Sbjct: 802 QDQRIGLSVIQR 813
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 515 bits (1326), Expect = e-146, Method: Compositional matrix adjust.
Identities = 291/791 (36%), Positives = 443/791 (56%), Gaps = 46/791 (5%)
Query: 14 WTEDPEEAWIDGEVEEVNDEDI--KIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTKLA 71
W D +E + E++ ++I KI S V K P+F + ++DM +
Sbjct: 31 WVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEK--LEDMANMT 88
Query: 72 YLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSPH 131
YL+E VL NLR RY IYTY+G IAVNP+RRLP +Y + ++ +Y+G E+ PH
Sbjct: 89 YLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPH 147
Query: 132 PFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMG------GRTATEKQ 185
F++AD+AY+ M+ + +QS L++GESGAGKTE+TK ++ YLA + A++K+
Sbjct: 148 LFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKK 207
Query: 186 --SVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSR 243
S+E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA I TYLLE+SR
Sbjct: 208 EGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSR 267
Query: 244 VCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPR--MFHYLNQSNFYELDGVDESKEYVK 301
V ERNYH FY +C+ ++ L P ++ ++NQ +D +D+ +E+
Sbjct: 268 VTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQGCL-TVDNIDDVEEFKL 326
Query: 302 TRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAE-- 359
+A +++G +E+ ++F+ A+ILH+G ++F + P++E++ S AE
Sbjct: 327 CDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQ-------RPREEQAESDGTAEAEKV 379
Query: 360 LFMC--DEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKIN 417
F+C + L ++ K + E +TK K +Y R+F+WLV ++N
Sbjct: 380 AFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVN 439
Query: 418 NTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTRE 477
T+ IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY +E
Sbjct: 440 KTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKE 499
Query: 478 EIDWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDHKRF- 535
I W +I+F +D Q +DLIE KP GI+++L+E CMFP++ ++F KLYQ R
Sbjct: 500 GIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMF 558
Query: 536 ------SKPKLSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF 589
++P F + HYAG+V Y +L+KNKD + A+L AS P V+ LF
Sbjct: 559 TKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELF 618
Query: 590 PPLTEEX-------XXXXXXXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIF 642
E + L L++ L +T PH++RC+ PN + +P +
Sbjct: 619 KAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLV 678
Query: 643 ENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVF-DGSCDEVTACKRL 701
+ VL QL+C GVLE IRI G+P+R ++ EF R+ ILAP G D T +++
Sbjct: 679 DAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKI 738
Query: 702 LQKVNLKG--YQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQSKVRSYFAHKRFNLLR 759
L + + Y++G TKVF +AG + L+ R + L + + Q+ +R Y K + L+
Sbjct: 739 LAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQ 798
Query: 760 CAAIQIQTLCR 770
I + + R
Sbjct: 799 DQRIGLSVIQR 809
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 515 bits (1326), Expect = e-146, Method: Compositional matrix adjust.
Identities = 291/791 (36%), Positives = 443/791 (56%), Gaps = 46/791 (5%)
Query: 14 WTEDPEEAWIDGEVEEVNDEDI--KIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTKLA 71
W D +E + E++ ++I KI S V K P+F + ++DM +
Sbjct: 35 WVPDEKEGFASAEIQSSKGDEITVKIVADSSTRTVKKDDIQSMNPPKFEK--LEDMANMT 92
Query: 72 YLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSPH 131
YL+E VL NLR RY IYTY+G IAVNP+RRLP +Y + ++ +Y+G E+ PH
Sbjct: 93 YLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPH 151
Query: 132 PFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMG------GRTATEKQ 185
F++AD+AY+ M+ + +QS L++GESGAGKTE+TK ++ YLA + A++K+
Sbjct: 152 LFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKK 211
Query: 186 --SVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSR 243
S+E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA I TYLLE+SR
Sbjct: 212 EGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSR 271
Query: 244 VCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPR--MFHYLNQSNFYELDGVDESKEYVK 301
V ERNYH FY +C+ ++ L P ++ ++NQ +D +D+ +E+
Sbjct: 272 VTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQGCL-TVDNIDDVEEFKL 330
Query: 302 TRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAE-- 359
+A +++G +E+ ++F+ A+ILH+G ++F + P++E++ S AE
Sbjct: 331 CDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQ-------RPREEQAESDGTAEAEKV 383
Query: 360 LFMC--DEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKIN 417
F+C + L ++ K + E +TK K +Y R+F+WLV ++N
Sbjct: 384 AFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVN 443
Query: 418 NTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTRE 477
T+ IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY +E
Sbjct: 444 KTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKE 503
Query: 478 EIDWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDHKRF- 535
I W +I+F +D Q +DLIE KP GI+++L+E CMFP++ ++F KLYQ R
Sbjct: 504 GIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMF 562
Query: 536 ------SKPKLSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF 589
++P F + HYAG+V Y +L+KNKD + A+L AS P V+ LF
Sbjct: 563 TKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELF 622
Query: 590 PPLTEEX-------XXXXXXXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIF 642
E + L L++ L +T PH++RC+ PN + +P +
Sbjct: 623 KAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLV 682
Query: 643 ENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVF-DGSCDEVTACKRL 701
+ VL QL+C GVLE IRI G+P+R ++ EF R+ ILAP G D T +++
Sbjct: 683 DAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKI 742
Query: 702 LQKVNLKG--YQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQSKVRSYFAHKRFNLLR 759
L + + Y++G TKVF +AG + L+ R + L + + Q+ +R Y K + L+
Sbjct: 743 LAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQ 802
Query: 760 CAAIQIQTLCR 770
I + + R
Sbjct: 803 DQRIGLSVIQR 813
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 514 bits (1324), Expect = e-145, Method: Compositional matrix adjust.
Identities = 291/794 (36%), Positives = 445/794 (56%), Gaps = 49/794 (6%)
Query: 14 WTEDPEEAWIDGEVEEVNDEDI--KIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTKLA 71
W DP+E + E++ E+I KI + V K P+F + ++DM +
Sbjct: 35 WVPDPKEGFASAEIQSSKGEEITVKIVSDNSTRTVKKDDIQQMNPPKFEK--LEDMANMT 92
Query: 72 YLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSPH 131
YL+E VL NLR RY IYTY+G IAVNP+RRLP +Y + ++ +Y+G E+ PH
Sbjct: 93 YLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPH 151
Query: 132 PFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMG----GRTATE---- 183
F++AD+AY+ M+ + +QS L++GESGAGKTE+TK ++ YLA + +T+ E
Sbjct: 152 LFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKTSEEEEAD 211
Query: 184 --KQSVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLER 241
K S+E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA I TYLLE+
Sbjct: 212 QKKGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEK 271
Query: 242 SRVCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPR--MFHYLNQSNFYELDGVDESKEY 299
SRV ERNYH FY +C+ ++ + L P ++ ++NQ +D +D+ +E+
Sbjct: 272 SRVTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQGCL-TVDNIDDVEEF 330
Query: 300 VKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAE 359
+A +++G +E+ ++F+ A+ILH+G ++F + P++E++ S AE
Sbjct: 331 KLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQ-------RPREEQAESDGTAEAE 383
Query: 360 --LFMC--DEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNK 415
F+C + L ++ K + E +TK K +Y R+F+WLV +
Sbjct: 384 KVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKR 443
Query: 416 INNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYT 475
+N T+ IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY
Sbjct: 444 VNRTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYK 503
Query: 476 REEIDWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQT------ 528
+E I W +I+F +D Q +DLIE KP GI+++L+E CMFP++ ++F YQ
Sbjct: 504 KEGIQWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQNHIGKNR 562
Query: 529 -FKDHKRFSKPKLSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSG 587
F + ++P F + HYAG+V Y +LDKNKD + ++L+ S P V+
Sbjct: 563 MFTKPGKPTRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLVAE 622
Query: 588 LFPPLTEEXXXXXXXXXXXXXXXQQLQA--------LLETLSATEPHYIRCVKPNNVLKP 639
LF E Q + A L++ L +T PH++RC+ PN + +P
Sbjct: 623 LFRAPDEPAGGAGGKKKKKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQP 682
Query: 640 SIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVF-DGSCDEVTAC 698
+ + VL QL+C GVLE IRI G+P+R ++ EF R+ ILAP G D T
Sbjct: 683 GLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVS 742
Query: 699 KRLLQKVNLKG--YQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQSKVRSYFAHKRFN 756
+++L + + Y++G TKVF +AG + L+ R + L + + Q+ +R Y K +
Sbjct: 743 EKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYK 802
Query: 757 LLRCAAIQIQTLCR 770
L+ I + + R
Sbjct: 803 KLQDQRIGLSVIQR 816
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 511 bits (1316), Expect = e-144, Method: Compositional matrix adjust.
Identities = 290/793 (36%), Positives = 439/793 (55%), Gaps = 48/793 (6%)
Query: 14 WTEDPEEAWIDGEVEEVNDEDI--KIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTKLA 71
W DP+E + E++ E+I KI + V K P+F + ++DM +
Sbjct: 35 WVPDPKEGFASAEIQSSKGEEITVKIVSDNSTRTVKKDDIQQMNPPKFEK--LEDMANMT 92
Query: 72 YLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSPH 131
YL+E VL NLR RY IYTY+G IAVNP+RRLP +Y + ++ +Y+G E+ PH
Sbjct: 93 YLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPH 151
Query: 132 PFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQ------ 185
F++AD+AY+ M+ + +QS L++GESGAGKTESTK ++ Y A + +K+
Sbjct: 152 LFSVADNAYQNMVTDRENQSCLITGESGAGKTESTKKVIMYFARVAANLYKQKEEPVPNL 211
Query: 186 ---SVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERS 242
++E Q++E+NPVLEAFGNAKT+RNNNSSRFGKF+ + F G+I+GA I TYLLE+S
Sbjct: 212 RASNLEDQIIEANPVLEAFGNAKTVRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKS 271
Query: 243 RVCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPR--MFHYLNQSNFYELDGVDESKEYV 300
RV ERNYH FY +C+ ++ + L P ++ ++NQ +D +D+ +E+
Sbjct: 272 RVTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQGCL-TVDNIDDVEEFK 330
Query: 301 KTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAE- 359
+A +++G +E+ ++F+ A+ILH+G ++F + P++E++ S AE
Sbjct: 331 LCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQ-------RPREEQAESDGTAEAEK 383
Query: 360 -LFMC--DEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKI 416
F+C + L ++ K + E +TK K +Y R+F+WLV ++
Sbjct: 384 VAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWLVKRV 443
Query: 417 NNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTR 476
N T+ IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQEEY +
Sbjct: 444 NRTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKK 503
Query: 477 EEIDWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQT------- 528
E I W +I+F +D Q +DLIE KP GI+++L+E CMFP++ ++F YQ
Sbjct: 504 EGIQWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQNHIGKNRM 562
Query: 529 FKDHKRFSKPKLSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGL 588
F + ++P F + HYAG+V Y +LDKNKD + ++L+ S P V+ L
Sbjct: 563 FTKPGKPTRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLVAEL 622
Query: 589 FPPLTEEXXXXXXXXXXXXXXXQQLQA--------LLETLSATEPHYIRCVKPNNVLKPS 640
F E Q + A L+ L T PH++RC+ PN P
Sbjct: 623 FRAPDEPAGGAGGKKKKKSSAFQTISAVHRESLNKLMCNLRRTNPHFVRCIIPNLEKDPG 682
Query: 641 IFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVF-DGSCDEVTACK 699
+ + VL QL+C GVLE IRI G+P+R ++ EF R+ ILAP G D T +
Sbjct: 683 LVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSE 742
Query: 700 RLLQKVNLKG--YQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQSKVRSYFAHKRFNL 757
++L + + Y++G TKVF +AG + L+ R + L + + Q+ +R Y K +
Sbjct: 743 KILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKK 802
Query: 758 LRCAAIQIQTLCR 770
L+ I + + R
Sbjct: 803 LQDQRIGLSVIQR 815
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 508 bits (1309), Expect = e-144, Method: Compositional matrix adjust.
Identities = 292/795 (36%), Positives = 447/795 (56%), Gaps = 52/795 (6%)
Query: 14 WTEDPEEAWIDGEVEEVNDEDIKIAC-TSGKTVVAKASNVYPKDPEFPQCGVD-DMTKLA 71
W DP+ ++ E++ +++ + + +T V K ++ ++P P+ ++ DM L
Sbjct: 35 WVPDPDFGFVGAEIQSTKGDEVTVKTDKTQETRVVKKDDIGQRNP--PKFEMNMDMANLT 92
Query: 72 YLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSPH 131
+L+E +L NLR RY+ IYTY+G IA+NP+RRLP +Y ++++Y+G E+ PH
Sbjct: 93 FLNEASILHNLRSRYESGFIYTYSGLFCIAINPYRRLP-IYTQGLVDKYRGKRRAEMPPH 151
Query: 132 PFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQ------ 185
F+IAD+AY+ M+ + +QS+L++GESGAGKTE+TK ++QY A + A +K
Sbjct: 152 LFSIADNAYQYMLQDRENQSMLITGESGAGKTENTKKVIQYFALVAASLAGKKDKKEEEK 211
Query: 186 -------SVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYL 238
++E Q+++ NPVLEA+GNAKT RNNNSSRFGKF+ + F +G+I+GA I TYL
Sbjct: 212 KKDEKKGTLEDQIVQCNPVLEAYGNAKTTRNNNSSRFGKFIRIHFGTQGKIAGADIETYL 271
Query: 239 LERSRVCQVSDPERNYHCFYMLCAGPA--EDIEK-YKLGNPRMFHYLNQSNFYELDGVDE 295
LE+SRV ERNYH FY L + PA E+IEK + +P ++ ++NQ +DG+D+
Sbjct: 272 LEKSRVTYQQSAERNYHIFYQLLS-PAFPENIEKILAVPDPGLYGFINQGTL-TVDGIDD 329
Query: 296 SKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFA-KGEEADSSEPKDEKSRSHL 354
+E T A +V+G +E+ ++++ ILHLG +++ +GE+A++ + + + L
Sbjct: 330 EEEMGLTDTAFDVLGFTDEEKLSMYKCTGCILHLGEMKWKQRGEQAEADGTAEAEKVAFL 389
Query: 355 --KTAAELFMCDEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWL 412
A +L C + K I E +T+ K +Y R+F+WL
Sbjct: 390 LGVNAGDLLKC--------LLKPKIKVGTEYVTQGRNKDQVTNSIAALAKSLYDRMFNWL 441
Query: 413 VNKINNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQE 472
V ++N T+ + IGVLDI GFE F NSFEQ CIN TNE+LQQ FN H+F +EQE
Sbjct: 442 VRRVNQTLDTKAKRQFFIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQE 501
Query: 473 EYTREEIDWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQT-FK 530
EY +E I W +I+F +D Q ++LIE KP GI+++L+E CMFP+++ +F KLY
Sbjct: 502 EYKKEGIVWEFIDFGLDLQACIELIE-KPMGILSILEEECMFPKASDTSFKNKLYDNHLG 560
Query: 531 DHKRFSKPK-----LSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFV 585
+ F KPK + F + HYAG V+Y +LDKNKD + +L S P V
Sbjct: 561 KNPMFGKPKPPKAGCAEAHFCLHHYAGSVSYSIAGWLDKNKDPINENVVELLQNSKEPIV 620
Query: 586 SGLFPP-------LTEEXXXXXXXXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLK 638
LF P ++ + L L++ L +T PH++RC+ PN +
Sbjct: 621 KMLFTPPRILTPGGKKKKGKSAAFQTISSVHKESLNKLMKNLYSTHPHFVRCIIPNELKT 680
Query: 639 PSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPK-VFDGSCDEVTA 697
P + + VL QLRC GVLE IRI G+P R ++ EF R+ ILAP V G D
Sbjct: 681 PGLIDAALVLHQLRCNGVLEGIRICRKGFPNRIIYSEFKQRYSILAPNAVPSGFADGKVV 740
Query: 698 CKRLLQKVNLKG--YQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQSKVRSYFAHKRF 755
+ L + L Y++G TKVF +AG + L+ R + L + + Q+ +R Y K +
Sbjct: 741 TDKALSALQLDPNEYRLGNTKVFFKAGVLGMLEDMRDERLSKIISMFQAHIRGYLMRKAY 800
Query: 756 NLLRCAAIQIQTLCR 770
L+ I + + R
Sbjct: 801 KKLQDQRIGLTLIQR 815
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 504 bits (1297), Expect = e-142, Method: Compositional matrix adjust.
Identities = 285/745 (38%), Positives = 419/745 (56%), Gaps = 33/745 (4%)
Query: 10 GSIVWTEDPEEAWIDGEVEEVNDEDIKIACTS--GKTVVAKASNVYPKDPEFPQCGVDDM 67
G VW P + + G + ++ + + I + GKT +A + V+P + E + V+D
Sbjct: 4 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 62
Query: 68 TKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGE 127
L YL+E +L N++ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G SLG
Sbjct: 63 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 122
Query: 128 LSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV 187
+ PH FAIAD A+R M +SQSI+VSGESGAGKTE+TK +++YL G Q +
Sbjct: 123 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTG----QDI 178
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
+ +++E+NP+LEAFGNAKT+RNNNSSRFGKFVE+ F+E+ + G + YLLE+SR+C
Sbjct: 179 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 238
Query: 248 SDPERNYHCFYMLCAGPAEDI-EKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
ERNYH FY LCAG +EDI E+ L +P F YLN+ + +D+ ++++ AM
Sbjct: 239 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAM 298
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
+ +G++ +E+ +FRVVA +LHLGN++F + KS L+ AEL D+
Sbjct: 299 KKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQD 358
Query: 367 SLEDSMCKRVIMT-----RDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIG 421
L S+ RV++T + I K VYS LFD +VN++N
Sbjct: 359 DLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFP 418
Query: 422 QDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDW 481
+ +S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y +E +
Sbjct: 419 FETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGV 477
Query: 482 SYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDHKRFSKPKLS 541
+ + ++DNQD +DLIE + GI+ +LDE P+ + + F ++Q KDH R S P+ S
Sbjct: 478 NEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKS 537
Query: 542 -------LTD---FTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLFPP 591
+ D F I H+AG V Y+T F++KN D + ++++ S F+ LF
Sbjct: 538 KLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFES 597
Query: 592 L------TEEXXXXXXXXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENT 645
T++ QL LL+ L +T +IRC+KPN + FE
Sbjct: 598 STNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGA 657
Query: 646 NVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKV 705
+L QL+C G++ + + G+P+R FHE + ++ P D CK L + +
Sbjct: 658 QILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKAL 716
Query: 706 NLK--GYQIGKTKVFLRAGQMAELD 728
L Y+ G TKVF R G+ AE D
Sbjct: 717 GLNEIDYKFGLTKVFFRPGKFAEFD 741
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 504 bits (1297), Expect = e-142, Method: Compositional matrix adjust.
Identities = 285/745 (38%), Positives = 419/745 (56%), Gaps = 33/745 (4%)
Query: 10 GSIVWTEDPEEAWIDGEVEEVNDEDIKIACTS--GKTVVAKASNVYPKDPEFPQCGVDDM 67
G VW P + + G + ++ + + I + GKT +A + V+P + E + V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 61
Query: 68 TKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGE 127
L YL+E +L N++ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G SLG
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV 187
+ PH FAIAD A+R M +SQSI+VSGESGAGKTE+TK +++YL G Q +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTG----QDI 177
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
+ +++E+NP+LEAFGNAKT+RNNNSSRFGKFVE+ F+E+ + G + YLLE+SR+C
Sbjct: 178 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYMLCAGPAEDI-EKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
ERNYH FY LCAG +EDI E+ L +P F YLN+ + +D+ ++++ AM
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAM 297
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
+ +G++ +E+ +FRVVA +LHLGN++F + KS L+ AEL D+
Sbjct: 298 KKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQD 357
Query: 367 SLEDSMCKRVIMT-----RDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIG 421
L S+ RV++T + I K VYS LFD +VN++N
Sbjct: 358 DLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFP 417
Query: 422 QDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDW 481
+ +S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y +E +
Sbjct: 418 FETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGV 476
Query: 482 SYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDHKRFSKPKLS 541
+ + ++DNQD +DLIE + GI+ +LDE P+ + + F ++Q KDH R S P+ S
Sbjct: 477 NEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKS 536
Query: 542 -------LTD---FTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLFPP 591
+ D F I H+AG V Y+T F++KN D + ++++ S F+ LF
Sbjct: 537 KLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFES 596
Query: 592 L------TEEXXXXXXXXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENT 645
T++ QL LL+ L +T +IRC+KPN + FE
Sbjct: 597 STNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGA 656
Query: 646 NVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKV 705
+L QL+C G++ + + G+P+R FHE + ++ P D CK L + +
Sbjct: 657 QILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKAL 715
Query: 706 NLK--GYQIGKTKVFLRAGQMAELD 728
L Y+ G TKVF R G+ AE D
Sbjct: 716 GLNEIDYKFGLTKVFFRPGKFAEFD 740
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 502 bits (1293), Expect = e-142, Method: Compositional matrix adjust.
Identities = 285/745 (38%), Positives = 418/745 (56%), Gaps = 33/745 (4%)
Query: 10 GSIVWTEDPEEAWIDGEVEEVNDEDIKIACTS--GKTVVAKASNVYPKDPEFPQCGVDDM 67
G VW P + + G + ++ + + I + GKT +A + V+P + E + V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 61
Query: 68 TKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGE 127
L YL+E +L N++ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G SLG
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV 187
+ PH FAIAD A+R M +SQSI+VSGESGAGKTE+TK +++YL G Q +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTG----QDI 177
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
+++E+NP+LEAFGNAKT+RNNNSSRFGKFVE+ F+E+ + G + YLLE+SR+C
Sbjct: 178 YDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYMLCAGPAEDI-EKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAM 306
ERNYH FY LCAG +EDI E+ L +P F YLN+ + +D+ ++++ AM
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAM 297
Query: 307 EVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEK 366
+ +G++ +E+ +FRVVA +LHLGN++F + KS L+ AEL D+
Sbjct: 298 KKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQD 357
Query: 367 SLEDSMCKRVIMT-----RDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIG 421
L S+ RV++T + I K VYS LFD +VN++N
Sbjct: 358 DLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFP 417
Query: 422 QDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDW 481
+ +S IGVLDI GFE F+ NSFEQFCIN NEKLQQ FN+ + K EQE Y +E +
Sbjct: 418 FETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGV 476
Query: 482 SYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDHKRFSKPKLS 541
+ + ++DNQD +DLIE + GI+ +LDE P+ + + F ++Q KDH R S P+ S
Sbjct: 477 NEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKS 536
Query: 542 -------LTD---FTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLFPP 591
+ D F I H+AG V Y+T F++KN D + ++++ S F+ LF
Sbjct: 537 KLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFES 596
Query: 592 L------TEEXXXXXXXXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENT 645
T++ QL LL+ L +T +IRC+KPN + FE
Sbjct: 597 STNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGA 656
Query: 646 NVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKV 705
+L QL+C G++ + + G+P+R FHE + ++ P D CK L + +
Sbjct: 657 QILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKAL 715
Query: 706 NLK--GYQIGKTKVFLRAGQMAELD 728
L Y+ G TKVF R G+ AE D
Sbjct: 716 GLNEIDYKFGLTKVFFRPGKFAEFD 740
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 495 bits (1274), Expect = e-140, Method: Compositional matrix adjust.
Identities = 303/854 (35%), Positives = 457/854 (53%), Gaps = 69/854 (8%)
Query: 10 GSIVWTEDPEEAWIDGEVEEVNDEDIKIACTS--GKTVVAKASNVYPKDPEFPQCGVDDM 67
G VW P + + G + ++ + + I + GKT +A + V+P + E + V+D
Sbjct: 4 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 62
Query: 68 TKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGE 127
L YL+E +L N++ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G SLG
Sbjct: 63 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 122
Query: 128 LSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV 187
+ PH FAIAD A+R M +SQSI+VSGESGAGKTE+TK +++YL G Q +
Sbjct: 123 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTG----QDI 178
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
+ +++E+NP+LEAFGNAKT+RNNNSSRFGKFVE+ F+E+ + G + YLLE+SR+C
Sbjct: 179 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 238
Query: 248 SDPERNYHCFYMLCAGPAEDI-EKYKLGNPRMFHYLNQ--SNFY---ELDG--------- 292
ERNYH FY LCAG +EDI E+ L +P F YLN+ + ++ E D
Sbjct: 239 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSP 298
Query: 293 ------------VDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEA 340
+D+ ++++ AM+ +G++ +E+ +FRVVA +LHLGN++F +
Sbjct: 299 EYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGST 358
Query: 341 DSSEPKDEKSRSHLKTAAELFMCDEKSLEDSMCKRVIMT-----RDESITKWXXXXXXXX 395
KS L+ AEL D+ L S+ RV++T + I
Sbjct: 359 SGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANN 418
Query: 396 XXXXXXKIVYSRLFDWLVNKINNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTN 455
K VYS LFD +VN++N + +S IGVLDI GFE F+ NSFEQFCIN N
Sbjct: 419 ARDALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCN 477
Query: 456 EKLQQHFNQHVFKMEQEEYTREEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPR 515
EKLQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P+
Sbjct: 478 EKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQ 537
Query: 516 STHETFAQKLYQTFKDHKRFSKPKLS-------LTD---FTICHYAGDVTYQTELFLDKN 565
+ + F ++Q KDH R S P+ S + D F I H+AG V Y+T F++KN
Sbjct: 538 PSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKN 597
Query: 566 KDYVVPEHQAVLSASGCPFVSGLFPPL------TEEXXXXXXXXXXXXXXXQQLQALLET 619
D + ++++ S F+ LF T++ QL LL+
Sbjct: 598 NDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDK 657
Query: 620 LSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSR 679
L +T +IRC+KPN + FE +L QL+C G++ + + G+P+R FHE +
Sbjct: 658 LRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNM 717
Query: 680 FRILAPKVFDGSCDEVTACKRLLQKVNLK--GYQIGKTKVFLRAGQMAELDSRRTQVLGQ 737
++ P D CK L + + L Y+ G TKVF R G+ AE D
Sbjct: 718 YKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDH 776
Query: 738 SAIIIQSKVRSYFAHKRFNLLRCAAIQIQTLCRGQNGRYQYERMRREAASVKIQKYSRMC 797
A +++ +V + R+ ++ ++ + L + +Y R A +K+QK RM
Sbjct: 777 LAELVK-RVNHWLICSRWKKVQWCSLSVIKL----KNKIKY----RAEACIKMQKTIRMW 827
Query: 798 LARKDYHKLRSSAI 811
L ++ HK R +
Sbjct: 828 LCKR-RHKPRIDGL 840
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 494 bits (1272), Expect = e-139, Method: Compositional matrix adjust.
Identities = 288/771 (37%), Positives = 424/771 (54%), Gaps = 59/771 (7%)
Query: 10 GSIVWTEDPEEAWIDGEVEEVNDEDIKIACTS--GKTVVAKASNVYPKDPEFPQCGVDDM 67
G VW P + + G + ++ + + I + GKT +A + V+P + E + V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 61
Query: 68 TKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGE 127
L YL+E +L N++ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G SLG
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV 187
+ PH FAIAD A+R M +SQSI+VSGESGAGKTE+TK +++YL G Q +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTG----QDI 177
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
+ +++E+NP+LEAFGNAKT+RNNNSSRFGKFVE+ F+E+ + G + YLLE+SR+C
Sbjct: 178 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYMLCAGPAEDI-EKYKLGNPRMFHYLNQ--SNFY---ELD---------- 291
ERNYH FY LCAG +EDI E+ L +P F YLN+ + ++ E D
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSP 297
Query: 292 -----------GVDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEA 340
G+D+ ++++ AM+ +G++ +E+ +FRVVA +LHLGN++F +
Sbjct: 298 EYLKAGSLKDPGLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGST 357
Query: 341 DSSEPKDEKSRSHLKTAAELFMCDEKSLEDSMCKRVIMT-----RDESITKWXXXXXXXX 395
KS L+ AEL D+ L S+ RV++T + I
Sbjct: 358 SGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANN 417
Query: 396 XXXXXXKIVYSRLFDWLVNKINNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTN 455
K VYS LFD +VN++N + +S IGVLDI GFE F+ NSFEQFCIN N
Sbjct: 418 ARDALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCN 476
Query: 456 EKLQQHFNQHVFKMEQEEYTREEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPR 515
EKLQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P+
Sbjct: 477 EKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQ 536
Query: 516 STHETFAQKLYQTFKDHKRFSKPKLS-------LTD---FTICHYAGDVTYQTELFLDKN 565
+ + F ++Q KDH R S P+ S + D F I H+AG V Y+T F++KN
Sbjct: 537 PSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKN 596
Query: 566 KDYVVPEHQAVLSASGCPFVSGLFPPL------TEEXXXXXXXXXXXXXXXQQLQALLET 619
D + ++++ S F+ LF T++ QL LL+
Sbjct: 597 NDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDK 656
Query: 620 LSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSR 679
L +T +IRC+KPN + FE +L QL+C G++ + + G+P+R FHE +
Sbjct: 657 LRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNM 716
Query: 680 FRILAPKVFDGSCDEVTACKRLLQKVNLK--GYQIGKTKVFLRAGQMAELD 728
++ P D CK L + + L Y+ G TKVF R G+ AE D
Sbjct: 717 YKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 491 bits (1265), Expect = e-139, Method: Compositional matrix adjust.
Identities = 287/771 (37%), Positives = 423/771 (54%), Gaps = 59/771 (7%)
Query: 10 GSIVWTEDPEEAWIDGEVEEVNDEDIKIACTS--GKTVVAKASNVYPKDPEFPQCGVDDM 67
G VW P + + G + ++ + + I + GKT +A + V+P + E + V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 61
Query: 68 TKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGE 127
L YL+E +L N++ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G SLG
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV 187
+ PH FAIAD A+R M +SQSI+VSGESGAGKTE+TK +++YL G Q +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTG----QDI 177
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
+ +++E+NP+LEAFGNAKT+RNNNSSRFGKFVE+ F+E+ + G + YLLE+SR+C
Sbjct: 178 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYMLCAGPAEDI-EKYKLGNPRMFHYLNQ--SNFY---ELDG--------- 292
ERNYH FY LCAG +EDI E+ L +P F YLN+ + ++ E D
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSP 297
Query: 293 ------------VDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEA 340
+D+ ++++ AM+ +G++ +E+ +FRVVA +LHLGN++F +
Sbjct: 298 EYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGST 357
Query: 341 DSSEPKDEKSRSHLKTAAELFMCDEKSLEDSMCKRVIMT-----RDESITKWXXXXXXXX 395
KS L+ AEL D+ L S+ RV++T + I
Sbjct: 358 SGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANN 417
Query: 396 XXXXXXKIVYSRLFDWLVNKINNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTN 455
K VYS LFD +VN++N + +S IGVLDI GFE F+ NSFEQFCIN N
Sbjct: 418 ARDALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCN 476
Query: 456 EKLQQHFNQHVFKMEQEEYTREEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPR 515
EKLQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P+
Sbjct: 477 EKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQ 536
Query: 516 STHETFAQKLYQTFKDHKRFSKPKLS-------LTD---FTICHYAGDVTYQTELFLDKN 565
+ + F ++Q KDH R S P+ S + D F I H+AG V Y+T F++KN
Sbjct: 537 PSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKN 596
Query: 566 KDYVVPEHQAVLSASGCPFVSGLFPPL------TEEXXXXXXXXXXXXXXXQQLQALLET 619
D + ++++ S F+ LF T++ QL LL+
Sbjct: 597 NDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDK 656
Query: 620 LSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSR 679
L +T +IRC+KPN + FE +L QL+C G++ + + G+P+R FHE +
Sbjct: 657 LRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNM 716
Query: 680 FRILAPKVFDGSCDEVTACKRLLQKVNLK--GYQIGKTKVFLRAGQMAELD 728
++ P D CK L + + L Y+ G TKVF R G+ AE D
Sbjct: 717 YKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 490 bits (1261), Expect = e-138, Method: Compositional matrix adjust.
Identities = 287/771 (37%), Positives = 422/771 (54%), Gaps = 59/771 (7%)
Query: 10 GSIVWTEDPEEAWIDGEVEEVNDEDIKIACTS--GKTVVAKASNVYPKDPEFPQCGVDDM 67
G VW P + + G + ++ + + I + GKT +A + V+P + E + V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 61
Query: 68 TKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGE 127
L YL+E +L N++ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G SLG
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV 187
+ PH FAIAD A+R M +SQSI+VSGESGAGKTE+TK +++YL G Q +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTG----QDI 177
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
+++E+NP+LEAFGNAKT+RNNNSSRFGKFVE+ F+E+ + G + YLLE+SR+C
Sbjct: 178 YDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYMLCAGPAEDI-EKYKLGNPRMFHYLNQ--SNFY---ELDG--------- 292
ERNYH FY LCAG +EDI E+ L +P F YLN+ + ++ E D
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSP 297
Query: 293 ------------VDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEA 340
+D+ ++++ AM+ +G++ +E+ +FRVVA +LHLGN++F +
Sbjct: 298 EYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGST 357
Query: 341 DSSEPKDEKSRSHLKTAAELFMCDEKSLEDSMCKRVIMT-----RDESITKWXXXXXXXX 395
KS L+ AEL D+ L S+ RV++T + I
Sbjct: 358 SGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANN 417
Query: 396 XXXXXXKIVYSRLFDWLVNKINNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTN 455
K VYS LFD +VN++N + +S IGVLDI GFE F+ NSFEQFCIN N
Sbjct: 418 ARDALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCN 476
Query: 456 EKLQQHFNQHVFKMEQEEYTREEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPR 515
EKLQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P+
Sbjct: 477 EKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQ 536
Query: 516 STHETFAQKLYQTFKDHKRFSKPKLS-------LTD---FTICHYAGDVTYQTELFLDKN 565
+ + F ++Q KDH R S P+ S + D F I H+AG V Y+T F++KN
Sbjct: 537 PSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKN 596
Query: 566 KDYVVPEHQAVLSASGCPFVSGLFPPL------TEEXXXXXXXXXXXXXXXQQLQALLET 619
D + ++++ S F+ LF T++ QL LL+
Sbjct: 597 NDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDK 656
Query: 620 LSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSR 679
L +T +IRC+KPN + FE +L QL+C G++ + + G+P+R FHE +
Sbjct: 657 LRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNM 716
Query: 680 FRILAPKVFDGSCDEVTACKRLLQKVNLK--GYQIGKTKVFLRAGQMAELD 728
++ P D CK L + + L Y+ G TKVF R G+ AE D
Sbjct: 717 YKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 766
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 490 bits (1261), Expect = e-138, Method: Compositional matrix adjust.
Identities = 287/771 (37%), Positives = 423/771 (54%), Gaps = 59/771 (7%)
Query: 10 GSIVWTEDPEEAWIDGEVEEVNDEDIKIACTS--GKTVVAKASNVYPKDPEFPQCGVDDM 67
G VW P + + G + ++ + + I + GKT +A + V+P + E + V+D
Sbjct: 4 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 62
Query: 68 TKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGE 127
L YL+E +L N++ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G SLG
Sbjct: 63 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 122
Query: 128 LSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSV 187
+ PH FAIAD A+R M +SQSI+VSGESGAGKTE+TK +++YL G Q +
Sbjct: 123 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTG----QDI 178
Query: 188 EQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQV 247
+ +++E+NP+LEAFGNAKT+RNNNSSRFGKFVE+ F+E+ + G + YLLE+SR+C
Sbjct: 179 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 238
Query: 248 SDPERNYHCFYMLCAGPAEDI-EKYKLGNPRMFHYLNQ--SNFY---ELDG--------- 292
ERNYH FY LCAG +EDI E+ L +P F YLN+ + ++ E D
Sbjct: 239 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSP 298
Query: 293 ------------VDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEA 340
+D+ ++++ AM+ +G++ +E+ +FRVVA +LHLGN++F +
Sbjct: 299 EYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGST 358
Query: 341 DSSEPKDEKSRSHLKTAAELFMCDEKSLEDSMCKRVIMT-----RDESITKWXXXXXXXX 395
KS L+ AEL D+ L S+ RV++T + I
Sbjct: 359 SGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANN 418
Query: 396 XXXXXXKIVYSRLFDWLVNKINNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTN 455
K VYS LFD +VN++N + +S IGVLDI GFE F+ NSFEQFCIN N
Sbjct: 419 ARDALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCN 477
Query: 456 EKLQQHFNQHVFKMEQEEYTREEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPR 515
EKLQQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P+
Sbjct: 478 EKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQ 537
Query: 516 STHETFAQKLYQTFKDHKRFSKPKLS-------LTD---FTICHYAGDVTYQTELFLDKN 565
+ + F ++Q KDH R S P+ S + D F I H+AG V Y+T F++KN
Sbjct: 538 PSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKN 597
Query: 566 KDYVVPEHQAVLSASGCPFVSGLFPPL------TEEXXXXXXXXXXXXXXXQQLQALLET 619
D + ++++ S F+ LF T++ QL LL+
Sbjct: 598 NDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDK 657
Query: 620 LSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSR 679
L +T +IRC+KPN + FE +L QL+C G++ + + G+P+R FHE +
Sbjct: 658 LRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNM 717
Query: 680 FRILAPKVFDGSCDEVTACKRLLQKVNLK--GYQIGKTKVFLRAGQMAELD 728
++ P D CK L + + L Y+ G TKVF R G+ AE D
Sbjct: 718 YKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 767
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 490 bits (1261), Expect = e-138, Method: Compositional matrix adjust.
Identities = 286/768 (37%), Positives = 422/768 (54%), Gaps = 59/768 (7%)
Query: 13 VWTEDPEEAWIDGEVEEVNDEDIKIACTS--GKTVVAKASNVYPKDPEFPQCGVDDMTKL 70
VW P + + G + ++ + + I + GKT +A + V+P + E + V+D L
Sbjct: 16 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDNCSL 74
Query: 71 AYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSP 130
YL+E +L N++ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G SLG + P
Sbjct: 75 MYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPP 134
Query: 131 HPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSVEQQ 190
H FAIAD A+R M +SQSI+VSGESGAGKTE+TK +++YL G Q ++ +
Sbjct: 135 HVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTG----QDIDDR 190
Query: 191 VLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQVSDP 250
++E+NP+LEAFGNAKT+RNNNSSRFGKFVE+ F+E+ + G + YLLE+SR+C
Sbjct: 191 IVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKE 250
Query: 251 ERNYHCFYMLCAGPAEDI-EKYKLGNPRMFHYLNQ--SNFY---ELDG------------ 292
ERNYH FY LCAG +EDI E+ L +P F YLN+ + ++ E D
Sbjct: 251 ERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL 310
Query: 293 ---------VDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSS 343
+D+ ++++ AM+ +G++ +E+ +FRVVA +LHLGN++F +
Sbjct: 311 KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGG 370
Query: 344 EPKDEKSRSHLKTAAELFMCDEKSLEDSMCKRVIMT-----RDESITKWXXXXXXXXXXX 398
KS L+ AEL D+ L S+ RV++T + I
Sbjct: 371 CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARD 430
Query: 399 XXXKIVYSRLFDWLVNKINNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKL 458
K VYS LFD +VN++N + +S IGVLDI GFE F+ NSFEQFCIN NEKL
Sbjct: 431 ALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKL 489
Query: 459 QQHFNQHVFKMEQEEYTREEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTH 518
QQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P+ +
Sbjct: 490 QQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSD 549
Query: 519 ETFAQKLYQTFKDHKRFSKPKLS-------LTD---FTICHYAGDVTYQTELFLDKNKDY 568
+ F ++Q KDH R S P+ S + D F I H+AG V Y+T F++KN D
Sbjct: 550 QHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDA 609
Query: 569 VVPEHQAVLSASGCPFVSGLFPPL------TEEXXXXXXXXXXXXXXXQQLQALLETLSA 622
+ ++++ S F+ LF T++ QL LL+ L +
Sbjct: 610 LHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRS 669
Query: 623 TEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRI 682
T +IRC+KPN + FE +L QL+C G++ + + G+P+R FHE + ++
Sbjct: 670 TGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKK 729
Query: 683 LAPKVFDGSCDEVTACKRLLQKVNLK--GYQIGKTKVFLRAGQMAELD 728
P D CK L + + L Y+ G TKVF R G+ AE D
Sbjct: 730 YMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 776
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 490 bits (1261), Expect = e-138, Method: Compositional matrix adjust.
Identities = 286/768 (37%), Positives = 422/768 (54%), Gaps = 59/768 (7%)
Query: 13 VWTEDPEEAWIDGEVEEVNDEDIKIACTS--GKTVVAKASNVYPKDPEFPQCGVDDMTKL 70
VW P + + G + ++ + + I + GKT +A + V+P + E + V+D L
Sbjct: 3 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDNCSL 61
Query: 71 AYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSP 130
YL+E +L N++ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G SLG + P
Sbjct: 62 MYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPP 121
Query: 131 HPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSVEQQ 190
H FAIAD A+R M +SQSI+VSGESGAGKTE+TK +++YL G Q ++ +
Sbjct: 122 HVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTG----QDIDDR 177
Query: 191 VLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQVSDP 250
++E+NP+LEAFGNAKT+RNNNSSRFGKFVE+ F+E+ + G + YLLE+SR+C
Sbjct: 178 IVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKE 237
Query: 251 ERNYHCFYMLCAGPAEDI-EKYKLGNPRMFHYLNQ--SNFY---ELDG------------ 292
ERNYH FY LCAG +EDI E+ L +P F YLN+ + ++ E D
Sbjct: 238 ERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL 297
Query: 293 ---------VDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSS 343
+D+ ++++ AM+ +G++ +E+ +FRVVA +LHLGN++F +
Sbjct: 298 KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGG 357
Query: 344 EPKDEKSRSHLKTAAELFMCDEKSLEDSMCKRVIMT-----RDESITKWXXXXXXXXXXX 398
KS L+ AEL D+ L S+ RV++T + I
Sbjct: 358 CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARD 417
Query: 399 XXXKIVYSRLFDWLVNKINNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKL 458
K VYS LFD +VN++N + +S IGVLDI GFE F+ NSFEQFCIN NEKL
Sbjct: 418 ALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKL 476
Query: 459 QQHFNQHVFKMEQEEYTREEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTH 518
QQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P+ +
Sbjct: 477 QQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSD 536
Query: 519 ETFAQKLYQTFKDHKRFSKPKLS-------LTD---FTICHYAGDVTYQTELFLDKNKDY 568
+ F ++Q KDH R S P+ S + D F I H+AG V Y+T F++KN D
Sbjct: 537 QHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDA 596
Query: 569 VVPEHQAVLSASGCPFVSGLFPPL------TEEXXXXXXXXXXXXXXXQQLQALLETLSA 622
+ ++++ S F+ LF T++ QL LL+ L +
Sbjct: 597 LHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRS 656
Query: 623 TEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRI 682
T +IRC+KPN + FE +L QL+C G++ + + G+P+R FHE + ++
Sbjct: 657 TGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKK 716
Query: 683 LAPKVFDGSCDEVTACKRLLQKVNLK--GYQIGKTKVFLRAGQMAELD 728
P D CK L + + L Y+ G TKVF R G+ AE D
Sbjct: 717 YMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 763
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 488 bits (1257), Expect = e-138, Method: Compositional matrix adjust.
Identities = 286/768 (37%), Positives = 421/768 (54%), Gaps = 59/768 (7%)
Query: 13 VWTEDPEEAWIDGEVEEVNDEDIKIACTS--GKTVVAKASNVYPKDPEFPQCGVDDMTKL 70
VW P + + G + ++ + + I + GKT +A + V+P + E + V+D L
Sbjct: 4 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDNCSL 62
Query: 71 AYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSP 130
YL+E +L N++ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G SLG + P
Sbjct: 63 MYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPP 122
Query: 131 HPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSVEQQ 190
H FAIAD A+R M +SQSI+VSGESGAGKTE+TK +++YL G Q + +
Sbjct: 123 HVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTG----QDIYDR 178
Query: 191 VLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQVSDP 250
++E+NP+LEAFGNAKT+RNNNSSRFGKFVE+ F+E+ + G + YLLE+SR+C
Sbjct: 179 IVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKE 238
Query: 251 ERNYHCFYMLCAGPAEDI-EKYKLGNPRMFHYLNQ--SNFY---ELDG------------ 292
ERNYH FY LCAG +EDI E+ L +P F YLN+ + ++ E D
Sbjct: 239 ERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL 298
Query: 293 ---------VDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSS 343
+D+ ++++ AM+ +G++ +E+ +FRVVA +LHLGN++F +
Sbjct: 299 KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGG 358
Query: 344 EPKDEKSRSHLKTAAELFMCDEKSLEDSMCKRVIMT-----RDESITKWXXXXXXXXXXX 398
KS L+ AEL D+ L S+ RV++T + I
Sbjct: 359 CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARD 418
Query: 399 XXXKIVYSRLFDWLVNKINNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKL 458
K VYS LFD +VN++N + +S IGVLDI GFE F+ NSFEQFCIN NEKL
Sbjct: 419 ALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKL 477
Query: 459 QQHFNQHVFKMEQEEYTREEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTH 518
QQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P+ +
Sbjct: 478 QQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSD 537
Query: 519 ETFAQKLYQTFKDHKRFSKPKLS-------LTD---FTICHYAGDVTYQTELFLDKNKDY 568
+ F ++Q KDH R S P+ S + D F I H+AG V Y+T F++KN D
Sbjct: 538 QHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDA 597
Query: 569 VVPEHQAVLSASGCPFVSGLFPPL------TEEXXXXXXXXXXXXXXXQQLQALLETLSA 622
+ ++++ S F+ LF T++ QL LL+ L +
Sbjct: 598 LHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRS 657
Query: 623 TEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRI 682
T +IRC+KPN + FE +L QL+C G++ + + G+P+R FHE + ++
Sbjct: 658 TGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKK 717
Query: 683 LAPKVFDGSCDEVTACKRLLQKVNLK--GYQIGKTKVFLRAGQMAELD 728
P D CK L + + L Y+ G TKVF R G+ AE D
Sbjct: 718 YMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 764
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 286/768 (37%), Positives = 421/768 (54%), Gaps = 59/768 (7%)
Query: 13 VWTEDPEEAWIDGEVEEVNDEDIKIACTS--GKTVVAKASNVYPKDPEFPQCGVDDMTKL 70
VW P + + G + + + I + GKT +A + V+P + E + V+D L
Sbjct: 16 VWAPHPTDGFQVGNIVRRGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDNCSL 74
Query: 71 AYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSP 130
YL+E +L N++ RY + IYTY NILIAVNP+ +P +Y + ++ Y+G SLG + P
Sbjct: 75 MYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPP 134
Query: 131 HPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQSVEQQ 190
H FAIAD A+R M +SQSI+VSGESGAGKTE+TK +++YL G Q ++ +
Sbjct: 135 HVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYGTG----QDIDDR 190
Query: 191 VLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQVSDP 250
++E+NP+LEAFGNAKT+RNNNSSRFGKFVE+ F+E+ + G + YLLE+SR+C
Sbjct: 191 IVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKE 250
Query: 251 ERNYHCFYMLCAGPAEDI-EKYKLGNPRMFHYLNQ--SNFY---ELDG------------ 292
ERNYH FY LCAG +EDI E+ L +P F YLN+ + ++ E D
Sbjct: 251 ERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL 310
Query: 293 ---------VDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSS 343
+D+ ++++ AM+ +G++ +E+ +FRVVA +LHLGN++F +
Sbjct: 311 KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGG 370
Query: 344 EPKDEKSRSHLKTAAELFMCDEKSLEDSMCKRVIMT-----RDESITKWXXXXXXXXXXX 398
KS L+ AEL D+ L S+ RV++T + I
Sbjct: 371 CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARD 430
Query: 399 XXXKIVYSRLFDWLVNKINNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKL 458
K VYS LFD +VN++N + +S IGVLDI GFE F+ NSFEQFCIN NEKL
Sbjct: 431 ALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKL 489
Query: 459 QQHFNQHVFKMEQEEYTREEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTH 518
QQ FN+ + K EQE Y +E + + + ++DNQD +DLIE + GI+ +LDE P+ +
Sbjct: 490 QQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSD 549
Query: 519 ETFAQKLYQTFKDHKRFSKP---KLSLTD-------FTICHYAGDVTYQTELFLDKNKDY 568
+ F ++Q KDH R S P KL++ + F I H+AG V Y+T F++KN D
Sbjct: 550 QHFTSAVHQKHKDHFRLSIPRKSKLAIHENIRDDEGFIIRHFAGAVCYETTQFVEKNNDA 609
Query: 569 VVPEHQAVLSASGCPFVSGLFPPL------TEEXXXXXXXXXXXXXXXQQLQALLETLSA 622
+ ++++ S F+ LF T++ QL LL+ L +
Sbjct: 610 LHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRS 669
Query: 623 TEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRI 682
T +IRC+KPN + FE +L QL+C G++ + + G+P+R FHE + ++
Sbjct: 670 TGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKK 729
Query: 683 LAPKVFDGSCDEVTACKRLLQKVNLK--GYQIGKTKVFLRAGQMAELD 728
P D CK L + + L Y+ G TKVF R G+ AE D
Sbjct: 730 YMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFD 776
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 485 bits (1248), Expect = e-137, Method: Compositional matrix adjust.
Identities = 285/808 (35%), Positives = 439/808 (54%), Gaps = 64/808 (7%)
Query: 11 SIVWTEDPEEAWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQCG-VDDMTK 69
S V+ P+E+++ G ++ + + G+T+ K V+ +P P+ ++DM
Sbjct: 33 SSVFVVHPKESFVKGTIQSKEGGKVTVKTEGGETLTVKEDQVFSMNP--PKYDKIEDMAM 90
Query: 70 LAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELS 129
+ +LHEP VL NL+ RY IYTY+G + VNP++ LP +Y+ ++ Y+G E
Sbjct: 91 MTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLP-VYNPKVVLAYRGKKRQEAP 149
Query: 130 PHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMG--GRTATEKQS- 186
PH F+I+D+AY+ M+ + +QSIL++GESGAGKT +TK ++QY A + G E+QS
Sbjct: 150 PHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSG 209
Query: 187 -----VEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLER 241
+E Q++ +NP+LEAFGNAKT+RN+NSSRFGKF+ + F G+++ A I TYLLE+
Sbjct: 210 KMQGTLEDQIISANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEK 269
Query: 242 SRVCQVSDPERNYHCFYMLCAGPAEDIEKYKL--GNPRMFHYLNQSNFYELDGVDESKEY 299
SRV ER+YH FY + + ++ L NP +HY++Q + +D+ +E
Sbjct: 270 SRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYHYVSQGEI-TVPSIDDQEEL 328
Query: 300 VKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAE 359
+ T A++++G ++DE+ AI+++ A++H GN++F + + + +EP + AA
Sbjct: 329 MATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVAD---KAAY 385
Query: 360 LFMCDEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNT 419
L + L ++C + +E +TK K VY ++F W+V +IN
Sbjct: 386 LMGLNSAELLKALCYPRVKVGNEFVTKGQTVSQVHNSVGALAKAVYEKMFLWMVIRINQQ 445
Query: 420 IGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEI 479
+ + IGVLDI GFE F NSFEQ CIN TNEKLQQ FN H+F +EQEEY +E I
Sbjct: 446 LDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGI 505
Query: 480 DWSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLY-QTFKDHKRFSK 537
+W +I+F +D ++LIE KP GI ++L+E CMFP++T +F KLY Q F K
Sbjct: 506 EWEFIDFGMDLAACIELIE-KPMGIFSILEEECMFPKATDTSFKNKLYDQHLGKSNNFQK 564
Query: 538 PKLSL----TDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLFPPL- 592
PK + F++ HYAG V Y +L+KNKD + + S ++ LF
Sbjct: 565 PKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYG 624
Query: 593 ---------TEEXXXXXXXXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFE 643
+ L L+ L +T PH++RC+ PN P E
Sbjct: 625 GEAEGGGGKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAME 684
Query: 644 NTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRIL-APKVFDGS-CDEVTACKRL 701
+ VL QLRC GVLE IRI G+P+R ++ +F R+R+L A + +G D A ++L
Sbjct: 685 HELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKL 744
Query: 702 LQKVNLKG--YQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQSKVRSYFAHKRFNLLR 759
L +++ Y+ G TKVF +AG + L+ R L + II +++ R
Sbjct: 745 LGSIDVDHTQYRFGHTKVFFKAGLLGLLEEMRDDKLAE--IITRTQAR------------ 790
Query: 760 CAAIQIQTLCRGQNGRYQYERM--RREA 785
CRG R +Y RM RRE+
Sbjct: 791 ---------CRGFLMRVEYRRMVERRES 809
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 478 bits (1231), Expect = e-135, Method: Compositional matrix adjust.
Identities = 282/791 (35%), Positives = 428/791 (54%), Gaps = 59/791 (7%)
Query: 12 IVWTEDPEEAWIDGEVEEVNDEDIKIACT-SGKTVVAKASNVYPKDPEFPQ-CGVDDMTK 69
+VW + + ++E +++ + +GK V ++ +P P+ V+DM +
Sbjct: 33 LVWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNP--PKFSKVEDMAE 90
Query: 70 LAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELS 129
L L+E VL NLR RY IYTY+G + +NP+++LP +Y +++ YKG E+
Sbjct: 91 LTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMP 149
Query: 130 PHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQS--- 186
PH +AIAD+AYR M+ + QSIL +GESGAGKTE+TK ++QYLA + +K +
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 187 ---------VEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTY 237
+E+Q+L++NP+LEAFGNAKT++N+NSSRFGKF+ + FD G I GA I TY
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 238 LLERSRVCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPRMFHYLNQSNFYE-----LDG 292
LLE+SR + + ER +H FY L AG +E ++ N + N F +
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASE-----QMRNDLLLEGFNNYTFLSNGHVPIPA 324
Query: 293 VDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRS 352
+ + + +T +AM ++G +EQ +I RVV+++L LGN+ F K D + D +
Sbjct: 325 QQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQ 384
Query: 353 HLKTAAELFMCD-EKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDW 411
+ + + D +S+ + R+ + RD + K K + RLF W
Sbjct: 385 KVCHLMGINVTDFTRSI---LTPRIKVGRD-VVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 412 LVNKINNTIGQDPNSKV-LIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKME 470
++ ++N + + +G+LDI GFE F+ NSFEQ CIN TNEKLQQ FN +F +E
Sbjct: 441 ILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILE 500
Query: 471 QEEYTREEIDWSYIEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPRSTHETFAQKLYQ 527
QEEY RE I+W++I+F +D Q ++LIE+ P G++ALLDE C FP++T +F +KL Q
Sbjct: 501 QEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQ 560
Query: 528 TFKDHKRFSKPKL--SLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFV 585
+H +F K K T+F I HYAG VTY +L KN D + ++L+ S FV
Sbjct: 561 EQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFV 620
Query: 586 SGLF------------PPLTEEXXXXXXXXXXXXXXX------QQLQALLETLSATEPHY 627
+ L+ +TE +QL L+ TL T P++
Sbjct: 621 ADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNF 680
Query: 628 IRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKV 687
+RC+ PN+ + + VL+QLRC GVLE IRI G+P R +F EF R+ ILA
Sbjct: 681 VRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANA 740
Query: 688 F-DGSCDEVTACKRLLQKVNLKG--YQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQS 744
G D AC +++ + L Y+IG++K+F R G +A L+ R + I Q+
Sbjct: 741 IPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQA 800
Query: 745 KVRSYFAHKRF 755
+ R Y A K F
Sbjct: 801 QCRGYLARKAF 811
Score = 32.7 bits (73), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 21/142 (14%)
Query: 887 LQAAKSKLEKEVEELTWRLQLEKRMRADLEEAKTQ---ENAKLKSALQEMQQQFEETKTL 943
L K+K E + EL RL+ E++ R +LE+ K + E++ L + E+Q Q E K
Sbjct: 1030 LTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQ 1089
Query: 944 LIKEREAAKKTTEALLIMEREAAEKEAVQVPVIREVPVIDHVMVNKLTAE---------- 993
L K+ E + AL +E E ++K + IRE+ + L +E
Sbjct: 1090 LAKKEEELQA---ALARLEDETSQKNNA-LKKIRELESHISDLQEDLESEKAARNKAEKQ 1145
Query: 994 ----NEELKALVSSLEKKIDET 1011
+EEL+AL + LE +D T
Sbjct: 1146 KRDLSEELEALKTELEDTLDTT 1167
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 476 bits (1225), Expect = e-134, Method: Compositional matrix adjust.
Identities = 271/755 (35%), Positives = 419/755 (55%), Gaps = 38/755 (5%)
Query: 13 VWTEDPEEAWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQCG-VDDMTKLA 71
V+ D ++ ++ ++ + GKTV K V ++P P+ ++DM L
Sbjct: 37 VFVPDDKQEFVKAKIVSREGGKVTAETEYGKTVTVKEDQVMQQNP--PKFDKIEDMAMLT 94
Query: 72 YLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSPH 131
+LHEP VL NL+ RY IYTY+G + VNP++ LP +Y ++ Y+G E PH
Sbjct: 95 FLHEPAVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLP-VYTPEVVAAYRGKKRSEAPPH 153
Query: 132 PFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQY---LAYMGGRTATE----K 184
F+I+D+AY+ M+ + +QSIL++GESGAGKT +TK ++QY +A +G R+ + K
Sbjct: 154 IFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKDQSPGK 213
Query: 185 QSVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRV 244
++E Q++++NP LEAFGNAKT+RN+NSSRFGKF+ + F G+++ A I TYLLE+SRV
Sbjct: 214 GTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRV 273
Query: 245 CQVSDPERNYHCFYMLCAGPAEDIEKYKL--GNPRMFHYLNQSNFYELDGVDESKEYVKT 302
ER+YH FY + + ++ L NP + +++Q + +D+++E + T
Sbjct: 274 IFQLKAERDYHIFYQILSNKKPELLDMLLITNNPYDYAFISQGE-TTVASIDDAEELMAT 332
Query: 303 RKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFM 362
A +V+G S+E+++++++ AI+H GN++F + + +EP + +A L
Sbjct: 333 DNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLKQREEQAEPDGTEEAD---KSAYLMG 389
Query: 363 CDEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTIGQ 422
+ L +C + +E +TK K VY R+F+W+V +IN T+
Sbjct: 390 LNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATLET 449
Query: 423 DPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWS 482
+ IGVLDI GFE F NSFEQ CIN TNEKLQQ FN H+F +EQEEY +E I+W+
Sbjct: 450 KQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWT 509
Query: 483 YIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQT-FKDHKRFSKPK- 539
+I+F +D Q +DLIE KP GI+++L+E CMFP++T TF KL+ F KP+
Sbjct: 510 FIDFGMDLQACIDLIE-KPMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKPRN 568
Query: 540 ---LSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF------- 589
F++ HYAG V Y +L KNKD + + S +S LF
Sbjct: 569 IKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYAGAD 628
Query: 590 PPL---TEEXXXXXXXXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTN 646
P+ + + L L+ L +T PH++RC+ PN P + +N
Sbjct: 629 APIEKGKGKAKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPL 688
Query: 647 VLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVF-DGS-CDEVTACKRLLQK 704
V+ QLRC GVLE IRI G+P R ++ +F R+RIL P +G D ++LL
Sbjct: 689 VMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLLSS 748
Query: 705 VNL--KGYQIGKTKVFLRAGQMAELDSRRTQVLGQ 737
+++ Y+ G TKVF +AG + L+ R + L +
Sbjct: 749 LDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERLSR 783
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 476 bits (1224), Expect = e-134, Method: Compositional matrix adjust.
Identities = 282/791 (35%), Positives = 428/791 (54%), Gaps = 59/791 (7%)
Query: 12 IVWTEDPEEAWIDGEVEEVNDEDIKIACT-SGKTVVAKASNVYPKDPEFPQCG-VDDMTK 69
+VW + + ++E +++ + +GK V ++ +P P+ V+DM +
Sbjct: 33 LVWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNP--PKFSKVEDMAE 90
Query: 70 LAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELS 129
L L+E VL NLR RY IYTY+G + +NP+++LP +Y +++ YKG E+
Sbjct: 91 LTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMP 149
Query: 130 PHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQS--- 186
PH +AIAD+AYR M+ + QSIL +GESGAGKTE+TK ++QYLA + +K +
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 187 ---------VEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTY 237
+E+Q+L++NP+LEAFGNAKT++N+NSSRFGKF+ + FD G I GA I TY
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 238 LLERSRVCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPRMFHYLNQSNFYE-----LDG 292
LLE+SR + + ER +H FY L AG +E ++ N + N F +
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASE-----QMRNDLLLEGFNNYTFLSNGHVPIPA 324
Query: 293 VDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRS 352
+ + + +T +AM ++G +EQ +I RVV+++L LGN+ F K D + D +
Sbjct: 325 QQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQ 384
Query: 353 HLKTAAELFMCD-EKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDW 411
+ + + D +S+ + R+ + RD + K K + RLF W
Sbjct: 385 KVCHLMGINVTDFTRSI---LTPRIKVGRD-VVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 412 LVNKINNTIGQDPNSKV-LIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKME 470
++ ++N + + +G+LDI GFE F+ NSFEQ CIN TNEKLQQ FN +F +E
Sbjct: 441 ILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILE 500
Query: 471 QEEYTREEIDWSYIEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPRSTHETFAQKLYQ 527
QEEY RE I+W++I+F +D Q ++LIE+ P G++ALLDE C FP++T +F +KL Q
Sbjct: 501 QEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQ 560
Query: 528 TFKDHKRFSKPKL--SLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFV 585
+H +F K K T+F I HYAG VTY +L KN D + ++L+ S FV
Sbjct: 561 EQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFV 620
Query: 586 SGLF------------PPLTEEXXXXXXXXXXXXXXX------QQLQALLETLSATEPHY 627
+ L+ +TE +QL L+ TL T P++
Sbjct: 621 ADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNF 680
Query: 628 IRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKV 687
+RC+ PN+ + + VL+QLRC GVLE IRI G+P R +F EF R+ ILA
Sbjct: 681 VRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANA 740
Query: 688 F-DGSCDEVTACKRLLQKVNLKG--YQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQS 744
G D AC +++ + L Y+IG++K+F R G +A L+ R + I Q+
Sbjct: 741 IPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQA 800
Query: 745 KVRSYFAHKRF 755
+ R Y A K F
Sbjct: 801 QCRGYLARKAF 811
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 475 bits (1223), Expect = e-134, Method: Compositional matrix adjust.
Identities = 282/791 (35%), Positives = 428/791 (54%), Gaps = 59/791 (7%)
Query: 12 IVWTEDPEEAWIDGEVEEVNDEDIKIACT-SGKTVVAKASNVYPKDPEFPQCG-VDDMTK 69
+VW + + ++E +++ + +GK V ++ +P P+ V+DM +
Sbjct: 33 LVWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNP--PKFSKVEDMAE 90
Query: 70 LAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELS 129
L L+E VL NLR RY IYTY+G + +NP+++LP +Y +++ YKG E+
Sbjct: 91 LTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMP 149
Query: 130 PHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQS--- 186
PH +AIAD+AYR M+ + QSIL +GESGAGKTE+TK ++QYLA + +K +
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 187 ---------VEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTY 237
+E+Q+L++NP+LEAFGNAKT++N+NSSRFGKF+ + FD G I GA I TY
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 238 LLERSRVCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPRMFHYLNQSNFYE-----LDG 292
LLE+SR + + ER +H FY L AG +E ++ N + N F +
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASE-----QMRNDLLLEGFNNYTFLSNGHVPIPA 324
Query: 293 VDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRS 352
+ + + +T +AM ++G +EQ +I RVV+++L LGN+ F K D + D +
Sbjct: 325 QQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQ 384
Query: 353 HLKTAAELFMCD-EKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDW 411
+ + + D +S+ + R+ + RD + K K + RLF W
Sbjct: 385 KVCHLMGINVTDFTRSI---LTPRIKVGRD-VVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 412 LVNKINNTIGQDPNSKV-LIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKME 470
++ ++N + + +G+LDI GFE F+ NSFEQ CIN TNEKLQQ FN +F +E
Sbjct: 441 ILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILE 500
Query: 471 QEEYTREEIDWSYIEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPRSTHETFAQKLYQ 527
QEEY RE I+W++I+F +D Q ++LIE+ P G++ALLDE C FP++T +F +KL Q
Sbjct: 501 QEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQ 560
Query: 528 TFKDHKRFSKPKL--SLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFV 585
+H +F K K T+F I HYAG VTY +L KN D + ++L+ S FV
Sbjct: 561 EQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFV 620
Query: 586 SGLF------------PPLTEEXXXXXXXXXXXXXXX------QQLQALLETLSATEPHY 627
+ L+ +TE +QL L+ TL T P++
Sbjct: 621 ADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNF 680
Query: 628 IRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKV 687
+RC+ PN+ + + VL+QLRC GVLE IRI G+P R +F EF R+ ILA
Sbjct: 681 VRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANA 740
Query: 688 F-DGSCDEVTACKRLLQKVNLKG--YQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQS 744
G D AC +++ + L Y+IG++K+F R G +A L+ R + I Q+
Sbjct: 741 IPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQA 800
Query: 745 KVRSYFAHKRF 755
+ R Y A K F
Sbjct: 801 QCRGYLARKAF 811
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 474 bits (1220), Expect = e-133, Method: Compositional matrix adjust.
Identities = 282/791 (35%), Positives = 428/791 (54%), Gaps = 59/791 (7%)
Query: 12 IVWTEDPEEAWIDGEVEEVNDEDIKIACT-SGKTVVAKASNVYPKDPEFPQCG-VDDMTK 69
+VW + + ++E +++ + +GK V ++ +P P+ V+DM +
Sbjct: 33 LVWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNP--PKFSKVEDMAE 90
Query: 70 LAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELS 129
L L+E VL NLR RY IYTY+G + +NP+++LP +Y +++ YKG E+
Sbjct: 91 LTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMP 149
Query: 130 PHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQS--- 186
PH +AIAD+AYR M+ + QSIL +GESGAGKTE+TK ++QYLA + +K +
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 187 ---------VEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTY 237
+E+Q+L++NP+LEAFGNAKT++N+NSSRFGKF+ + FD G I GA I TY
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 238 LLERSRVCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPRMFHYLNQSNFYE-----LDG 292
LLE+SR + + ER +H FY L AG +E ++ N + N F +
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASE-----QMRNDLLLEGFNNYTFLSNGHVPIPA 324
Query: 293 VDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRS 352
+ + + +T +AM ++G +EQ +I RVV+++L LGN+ F K D + D +
Sbjct: 325 QQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQ 384
Query: 353 HLKTAAELFMCD-EKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDW 411
+ + + D +S+ + R+ + RD + K K + RLF W
Sbjct: 385 KVCHLMGINVTDFTRSI---LTPRIKVGRD-VVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 412 LVNKINNTIGQDPNSKV-LIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKME 470
++ ++N + + +G+LDI GFE F+ NSFEQ CIN TNEKLQQ FN +F +E
Sbjct: 441 ILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILE 500
Query: 471 QEEYTREEIDWSYIEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPRSTHETFAQKLYQ 527
QEEY RE I+W++I+F +D Q ++LIE+ P G++ALLDE C FP++T +F +KL Q
Sbjct: 501 QEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQ 560
Query: 528 TFKDHKRFSKPKL--SLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFV 585
+H +F K K T+F I HYAG VTY +L KN D + ++L+ S FV
Sbjct: 561 EQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFV 620
Query: 586 SGLF------------PPLTEEXXXXXXXXXXXXXXX------QQLQALLETLSATEPHY 627
+ L+ +TE +QL L+ TL T P++
Sbjct: 621 ADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNF 680
Query: 628 IRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKV 687
+RC+ PN+ + + VL+QLRC GVLE IRI G+P R +F EF R+ ILA
Sbjct: 681 VRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANA 740
Query: 688 F-DGSCDEVTACKRLLQKVNLKG--YQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQS 744
G D AC +++ + L Y+IG++K+F R G +A L+ R + I Q+
Sbjct: 741 IPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQA 800
Query: 745 KVRSYFAHKRF 755
+ R Y A K F
Sbjct: 801 QCRGYLARKAF 811
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust.
Identities = 263/676 (38%), Positives = 397/676 (58%), Gaps = 22/676 (3%)
Query: 63 GVDDMTKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKG 122
GV D L + E ++NL R+ + IYTY G+++I+ NPF+ L ++Y ++ Y G
Sbjct: 9 GVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNL-NIYKESDIKAYNG 67
Query: 123 ASLGELSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTAT 182
E+ PH +A+A+ AYR M +Q +++SGESGAGKTE++K +MQ+L ++ +
Sbjct: 68 RYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSP 127
Query: 183 EKQSVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERS 242
+ + + +L+SNP+LEAFGNAKTLRN+NSSRFGK++E+QF+ G G I YLLE+S
Sbjct: 128 NGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKS 187
Query: 243 RVCQVSDPERNYHCFYMLCAGPAED-IEKYKLG-NPRMFHYLNQSNFYELDGVDESKEYV 300
RV + ER++H FY + G ++ +++ L N + YL +S +++ +D+S E+
Sbjct: 188 RVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSGEFK 247
Query: 301 KTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSH-LKTAAE 359
KAME +G+ +Q++I+R++AAILH+GN+ FA+ E + + S + L AA
Sbjct: 248 IIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAAS 307
Query: 360 LFMCDEKSLEDSMCKRVIMT----RDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNK 415
D++SL ++C R I T R E I+ K +Y RLF+WLV+K
Sbjct: 308 CLKTDQQSLSIALCYRSISTGVGKRCEVISVPMDCNQAAYSRDALAKALYERLFNWLVSK 367
Query: 416 INNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYT 475
IN I +IG+LDIYGFE F+ NSFEQ IN NEKLQQ F + K EQEEY
Sbjct: 368 INTIINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYV 427
Query: 476 REEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDHKRF 535
RE I+W IE+ +N+ + +LIEKKP G+I+LLDEAC+ +ST +TF + + F+ +
Sbjct: 428 REGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHL 487
Query: 536 -----SKPK-LSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF 589
SK + + T F + HYAGDVTY FLDKNKD + + + + +S P V GLF
Sbjct: 488 QSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLF 547
Query: 590 PPLTEEXXXXXXXXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQ 649
PP T + AL+ TL A PHY+RC+K N+ + + + V
Sbjct: 548 PP-TRPEDSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRH 606
Query: 650 QLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKV---FDGSCDEVTACKRLLQKVN 706
Q+R G+LE +R+ AG+ R + F +R+++L K F+G+ + T + +LQ+ N
Sbjct: 607 QVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQAT--ELILQQHN 664
Query: 707 LKGYQI--GKTKVFLR 720
+ +I GKTKVF+R
Sbjct: 665 IDKEEIRMGKTKVFIR 680
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 472 bits (1215), Expect = e-133, Method: Compositional matrix adjust.
Identities = 283/791 (35%), Positives = 428/791 (54%), Gaps = 59/791 (7%)
Query: 12 IVWTEDPEEAWIDGEVEEVNDEDIKIACT-SGKTVVAKASNVYPKDPEFPQCG-VDDMTK 69
+VW + + ++E +++ + +GK V ++ +P P+ V+DM +
Sbjct: 33 LVWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNP--PKFSKVEDMAE 90
Query: 70 LAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELS 129
L L+E VL NLR RY IYTY+G + +NP+++LP +Y +++ YKG E+
Sbjct: 91 LTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMP 149
Query: 130 PHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQS--- 186
PH +AIAD+AYR M+ + QSIL +GESGAGKTE+TK ++QYLA + +K +
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 187 ---------VEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTY 237
+E+Q+L++NP+LEAFGNAKT++N+NSSRFGKF+ + FD G I GA I TY
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 238 LLERSRVCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPRMFHYLNQSNFYELDGV---- 293
LLE+SR + + ER +H FY L AG +E ++ N + N F V
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASE-----QMRNDLLLEGFNNYTFLSNGHVPIPA 324
Query: 294 -DESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRS 352
+ + + +T +AM ++G +EQ +I RVV+++L LGN+ F K D + D +
Sbjct: 325 QQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQ 384
Query: 353 HLKTAAELFMCD-EKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDW 411
+ + + D +S+ + R+ + RD + K K + RLF W
Sbjct: 385 KVCHLMGINVTDFTRSI---LTPRIKVGRD-VVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 412 LVNKINNTIGQDPNSKV-LIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKME 470
++ ++N + + +G+LDI GFE F+ NSFEQ CIN TNEKLQQ FN +F +E
Sbjct: 441 ILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILE 500
Query: 471 QEEYTREEIDWSYIEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPRSTHETFAQKLYQ 527
QEEY RE I+W++I+F +D Q ++LIE+ P G++ALLDE C FP++T +F +KL Q
Sbjct: 501 QEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQ 560
Query: 528 TFKDHKRFSKPKL--SLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFV 585
+H +F K K T+F I HYAG VTY +L KN D + ++L+ S FV
Sbjct: 561 EQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFV 620
Query: 586 SGLF------------PPLTEEXXXXXXXXXXXXXXX------QQLQALLETLSATEPHY 627
+ L+ +TE +QL L+ TL T P++
Sbjct: 621 ADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNF 680
Query: 628 IRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKV 687
+RC+ PN+ + + VL+QLRC GVLE IRI G+P R +F EF R+ ILA
Sbjct: 681 VRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANA 740
Query: 688 F-DGSCDEVTACKRLLQKVNLKG--YQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQS 744
G D AC +++ + L Y+IG++K+F R G +A L+ R + I Q+
Sbjct: 741 IPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAFQA 800
Query: 745 KVRSYFAHKRF 755
+ R Y A K F
Sbjct: 801 QCRGYLARKAF 811
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 470 bits (1209), Expect = e-132, Method: Compositional matrix adjust.
Identities = 262/676 (38%), Positives = 396/676 (58%), Gaps = 22/676 (3%)
Query: 63 GVDDMTKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKG 122
GV D L + E ++NL R+ + IYTY G+++I+ NPF+ L ++Y ++ Y G
Sbjct: 9 GVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNL-NIYKESDIKAYNG 67
Query: 123 ASLGELSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTAT 182
E+ PH +A+A+ AYR M +Q +++SGESGAGKTE++K +MQ+L ++ +
Sbjct: 68 RYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSP 127
Query: 183 EKQSVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERS 242
+ + + +L+SNP+LEAFGNAKTLRN+NSSRFGK++E+QF+ G G I YLLE+S
Sbjct: 128 NGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKS 187
Query: 243 RVCQVSDPERNYHCFYMLCAGPAED-IEKYKLG-NPRMFHYLNQSNFYELDGVDESKEYV 300
RV + ER++H FY + G ++ +++ L N + YL +S +++ +D+S E+
Sbjct: 188 RVVGRTQGERSFHIFYQMLKGLSQSKLDELGLTPNAPAYEYLKKSGCFDVSTIDDSGEFK 247
Query: 301 KTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSH-LKTAAE 359
KAME +G+ +Q++I+R++AAILH+GN+ FA+ E + + S + L AA
Sbjct: 248 IIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAAS 307
Query: 360 LFMCDEKSLEDSMCKRVIMT----RDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNK 415
D++SL ++C R I T R I+ K +Y RLF+WLV+K
Sbjct: 308 CLKTDQQSLSIALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFNWLVSK 367
Query: 416 INNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYT 475
IN I +IG+LDIYGFE F+ NSFEQ IN NEKLQQ F + K EQEEY
Sbjct: 368 INTIINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYV 427
Query: 476 REEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDHKRF 535
RE I+W IE+ +N+ + +LIEKKP G+I+LLDEAC+ +ST +TF + + F+ +
Sbjct: 428 REGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHL 487
Query: 536 -----SKPK-LSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLF 589
SK + + T F + HYAGDVTY FLDKNKD + + + + +S P V GLF
Sbjct: 488 QSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLF 547
Query: 590 PPLTEEXXXXXXXXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQ 649
PP T + AL+ TL A PHY+RC+K N+ + + + V
Sbjct: 548 PP-TRPEDSKKRPETAGSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDEDRVRH 606
Query: 650 QLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKV---FDGSCDEVTACKRLLQKVN 706
Q+R G+LE +R+ AG+ R + F +R+++L K F+G+ + T + +LQ+ N
Sbjct: 607 QVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQAT--ELILQQHN 664
Query: 707 LKGYQI--GKTKVFLR 720
+ +I GKTKVF+R
Sbjct: 665 IDKEEIRMGKTKVFIR 680
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 276/767 (35%), Positives = 418/767 (54%), Gaps = 59/767 (7%)
Query: 12 IVWTEDPEEAWIDGEVEEVNDEDIKIACT-SGKTVVAKASNVYPKDPEFPQCG-VDDMTK 69
+VW + + ++E +++ + +GK V ++ +P P+ V+DM +
Sbjct: 33 LVWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMNP--PKFSKVEDMAE 90
Query: 70 LAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELS 129
L L+E VL NLR RY IYTY+G + +NP+++LP +Y +++ YKG E+
Sbjct: 91 LTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMP 149
Query: 130 PHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQS--- 186
PH +AIAD+AYR M+ + QSIL +GESGAGKTE+TK ++QYLA + +K +
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 187 ---------VEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTY 237
+E+Q+L++NP+LEAFGNAKT++N+NSSRFGKF+ + FD G I GA I TY
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 238 LLERSRVCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPRMFHYLNQSNFYELDGV---- 293
LLE+SR + + ER +H FY L AG +E ++ N + N F V
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASE-----QMRNDLLLEGFNNYTFLSNGHVPIPA 324
Query: 294 -DESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRS 352
+ + + +T +AM ++G +EQ +I RVV+++L LGN+ F K D + D +
Sbjct: 325 QQDDEMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQ 384
Query: 353 HLKTAAELFMCD-EKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDW 411
+ + + D +S+ + R+ + RD + K K + RLF W
Sbjct: 385 KVCHLMGINVTDFTRSI---LTPRIKVGRD-VVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 412 LVNKINNTIGQDPNSKV-LIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKME 470
++ ++N + + +G+LDI GFE F+ NSFEQ CIN TNEKLQQ FN +F +E
Sbjct: 441 ILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILE 500
Query: 471 QEEYTREEIDWSYIEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPRSTHETFAQKLYQ 527
QEEY RE I+W++I+F +D Q ++LIE+ P G++ALLDE C FP++T +F +KL Q
Sbjct: 501 QEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQ 560
Query: 528 TFKDHKRFSKPKL--SLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFV 585
+H +F K K T+F I HYAG VTY +L KN D + ++L+ S FV
Sbjct: 561 EQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFV 620
Query: 586 SGLF------------PPLTEEXXXXXXXXXXXXXXX------QQLQALLETLSATEPHY 627
+ L+ +TE +QL L+ TL T P++
Sbjct: 621 ADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNF 680
Query: 628 IRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKV 687
+RC+ PN+ + + VL+QLRC GVLE IRI G+P R +F EF R+ ILA
Sbjct: 681 VRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANA 740
Query: 688 F-DGSCDEVTACKRLLQKVNLKG--YQIGKTKVFLRAGQMAELDSRR 731
G D AC +++ + L Y+IG++K+F R G +A L+ R
Sbjct: 741 IPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEER 787
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 455 bits (1171), Expect = e-128, Method: Compositional matrix adjust.
Identities = 264/707 (37%), Positives = 392/707 (55%), Gaps = 39/707 (5%)
Query: 57 PEFPQCGVDDMTKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHM 116
P+F + +DM +L L+E VL NLR RY IYTY+G + +NP+++LP +Y +
Sbjct: 57 PKFSKA--EDMAELTCLNEASVLHNLRERYYSGLIYTYSGLFCVVINPYKQLP-IYTEAI 113
Query: 117 MEQYKGASLGELSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYM 176
+E Y+G E+ PH +A+ + AYR M+ + QSIL +GESGAGKTE+TK ++QYLA++
Sbjct: 114 VEMYRGKKRHEVPPHVYAVTEGAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAHV 173
Query: 177 GGRTATEKQS-----VEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISG 231
K+ +E+Q+L++NP+LEAFGNAKT++N+NSSRFGKF+ + FD G I G
Sbjct: 174 ASSPKGRKEPGVPGELERQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVAGYIVG 233
Query: 232 AAIRTYLLERSRVCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPRMFHYLNQSNFYELD 291
A I TYLLE+SR + + E ++H FY L G E ++ L P HY +N
Sbjct: 234 ANIETYLLEKSRAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEP-CSHYRFLTNGPSSS 292
Query: 292 GVDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSR 351
E + + +T +++ V+G + +E ++ R+V+A+L GN+ + D + D +
Sbjct: 293 PGQERELFQETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKRERNTDQATMPDNTAA 352
Query: 352 SHLKTAAELFMCD-EKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFD 410
L L + D ++L + R+ + RD + K K Y RLF
Sbjct: 353 QKLCRLLGLGVTDFSRAL---LTPRIKVGRD-YVQKAQTKEQADFALEALAKATYERLFR 408
Query: 411 WLVNKINNTIGQDPNSKV-LIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKM 469
WLV ++N + + P +G+LDI GFE F+ NSFEQ CIN TNEKLQQ FN +F +
Sbjct: 409 WLVLRLNRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVL 468
Query: 470 EQEEYTREEIDWSYIEF-IDNQDVLDLIEK--KPGGIIALLDEACMFPRSTHETFAQKLY 526
EQEEY RE I W++++F +D Q +DLIE+ P G++ALLDE C FP++T ++F +K+
Sbjct: 469 EQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKATDKSFVEKVA 528
Query: 527 QTFKDHKRFSKPK--LSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSAS---- 580
Q H +F +P+ DF++ HYAG V Y+ +L KN D + A+L S
Sbjct: 529 QEQGGHPKFQRPRHLRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDRL 588
Query: 581 ------------GCPFVSGLFPPLTEEXXXXXXXXXXXXXXXQQLQALLETLSATEPHYI 628
G VS L + L L+ TLS T P ++
Sbjct: 589 TAEIWKDVEGIVGLEQVSSLGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTNPSFV 648
Query: 629 RCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVF 688
RC+ PN+ + E VL QLRC GVLE IRI G+P R +F EF R+ IL P
Sbjct: 649 RCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRILFQEFRQRYEILTPNAI 708
Query: 689 -DGSCDEVTACKRLLQKVNLKG--YQIGKTKVFLRAGQMAELDSRRT 732
G D AC++++Q + L Y++G++K+F RAG +A+L+ R
Sbjct: 709 PKGFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEERA 755
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 260/769 (33%), Positives = 404/769 (52%), Gaps = 37/769 (4%)
Query: 11 SIVWTEDPEEAWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTKL 70
S V+ P+++++ G ++ + + G+T+ K V+ +P ++DM +
Sbjct: 33 SSVFVVHPKQSFVXGTIQSXEGGXVTVXTEGGETLTVKEDQVFSMNPPXYDX-IEDMAMM 91
Query: 71 AYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSP 130
+LHEP VL NL RY IYTY+G + VNP+ LP +Y+ ++ Y+G E P
Sbjct: 92 THLHEPAVLYNLXERYAAWMIYTYSGLFCVTVNPYXWLP-VYNPXVVLAYRGKKRQEAPP 150
Query: 131 HPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMG--GRTATEKQS-- 186
H F+I+D+AY+ M+ + +QSIL++GESGAGKT +T ++QY A + G E+QS
Sbjct: 151 HIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKKEEQSGK 210
Query: 187 ----VEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERS 242
+E Q++ +NP+LEAFGNA T+RN+NSSRFG F+ + F G+++ A I TYLLE S
Sbjct: 211 MQGTLEDQIISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXS 270
Query: 243 RVCQVSDPERNYHCFYMLCAGPAEDIEKYKL--GNPRMFHYLNQSNFYELDGVDESKEYV 300
RV ER+YH FY + + ++ L NP +HY+++ + +D+ +E +
Sbjct: 271 RVTFQLPAERSYHIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSIDDQEELM 329
Query: 301 KTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAEL 360
T A++++G ++DE AI+ + A++H GN++F + + + +EP + AA L
Sbjct: 330 ATDSAIDILGFSADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVAD---XAAYL 386
Query: 361 FMCDEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTI 420
+ L ++C + +E++T VY +F W+V +IN +
Sbjct: 387 MGLNSAELLKALCYPRVGVGNEAVTXGETVSEVHNSVGALAXAVYEXMFLWMVIRINQQL 446
Query: 421 GQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEID 480
+ IGVLDI GFE F NSFEQ CIN TNE LQQ FN H+F +EQEEY E I+
Sbjct: 447 DTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIE 506
Query: 481 WSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLY-QTFKDHKRFSKP 538
W +I+F +D ++LIE P GI ++L+E CMFP++T +F LY + F KP
Sbjct: 507 WEFIDFGMDLAACIELIE-XPMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKP 565
Query: 539 KLSL----TDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLFPPL-- 592
K + F++ HYAG V Y +L+ N D + + S ++ LF
Sbjct: 566 KPAKGKAEAHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSVXTLALLFATYGG 625
Query: 593 --------TEEXXXXXXXXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFEN 644
+ L L+ L +T PH++RC+ PN P E+
Sbjct: 626 EAEGGGGKKGGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCIIPNETXTPGAMEH 685
Query: 645 TNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRIL-APKVFDGS-CDEVTACKRLL 702
VL QLRC GVLE IRI G+P+R ++ +F R+R+L A + +G D A ++LL
Sbjct: 686 ELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLL 745
Query: 703 --QKVNLKGYQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQSKVRSY 749
V+ Y G T VF AG + L+ R L + Q++ R +
Sbjct: 746 GGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIITATQARCRGF 794
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 447 bits (1151), Expect = e-125, Method: Compositional matrix adjust.
Identities = 260/769 (33%), Positives = 404/769 (52%), Gaps = 37/769 (4%)
Query: 11 SIVWTEDPEEAWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTKL 70
S V+ P+++++ G ++ + + G+T+ K V+ +P ++DM +
Sbjct: 36 SSVFVVHPKQSFVXGTIQSXEGGXVTVXTEGGETLTVKEDQVFSMNPPXYDX-IEDMAMM 94
Query: 71 AYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSP 130
+LHEP VL NL RY IYTY+G + VNP+ LP +Y+ ++ Y+G E P
Sbjct: 95 THLHEPAVLYNLXERYAAWMIYTYSGLFCVTVNPYXWLP-VYNPXVVLAYRGKKRQEAPP 153
Query: 131 HPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMG--GRTATEKQS-- 186
H F+I+D+AY+ M+ + +QSIL++GESGAGKT +T ++QY A + G E+QS
Sbjct: 154 HIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKKEEQSGK 213
Query: 187 ----VEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERS 242
+E Q++ +NP+LEAFGNA T+RN+NSSRFG F+ + F G+++ A I TYLLE S
Sbjct: 214 MQGTLEDQIISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLEXS 273
Query: 243 RVCQVSDPERNYHCFYMLCAGPAEDIEKYKL--GNPRMFHYLNQSNFYELDGVDESKEYV 300
RV ER+YH FY + + ++ L NP +HY+++ + +D+ +E +
Sbjct: 274 RVTFQLPAERSYHIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSIDDQEELM 332
Query: 301 KTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAEL 360
T A++++G ++DE AI+ + A++H GN++F + + + +EP + AA L
Sbjct: 333 ATDSAIDILGFSADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVAD---XAAYL 389
Query: 361 FMCDEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNTI 420
+ L ++C + +E++T VY +F W+V +IN +
Sbjct: 390 MGLNSAELLKALCYPRVGVGNEAVTXGETVSEVHNSVGALAXAVYEXMFLWMVIRINQQL 449
Query: 421 GQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEID 480
+ IGVLDI GFE F NSFEQ CIN TNE LQQ FN H+F +EQEEY E I+
Sbjct: 450 DTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIE 509
Query: 481 WSYIEF-IDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLY-QTFKDHKRFSKP 538
W +I+F +D ++LIE P GI ++L+E CMFP++T +F LY + F KP
Sbjct: 510 WEFIDFGMDLAACIELIE-XPMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKP 568
Query: 539 KLSL----TDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLFPPL-- 592
K + F++ HYAG V Y +L+ N D + + S ++ LF
Sbjct: 569 KPAKGKAEAHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSVXTLALLFATYGG 628
Query: 593 --------TEEXXXXXXXXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFEN 644
+ L L+ L +T PH++RC+ PN P E+
Sbjct: 629 EAEGGGGKKGGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCIIPNETXTPGAMEH 688
Query: 645 TNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRIL-APKVFDGS-CDEVTACKRLL 702
VL QLRC GVLE IRI G+P+R ++ +F R+R+L A + +G D A ++LL
Sbjct: 689 ELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLL 748
Query: 703 --QKVNLKGYQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQSKVRSY 749
V+ Y G T VF AG + L+ R L + Q++ R +
Sbjct: 749 GGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIITATQARCRGF 797
>pdb|2F6H|X Chain X, Myosin V Cargo Binding Domain
Length = 419
Score = 38.1 bits (87), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 4/132 (3%)
Query: 1305 IIDIVNGLLRSLKENFVPRVLIQRIFTQIFSYINVQLFNSLLLRRECCTFSNGEYVKQGL 1364
I+ N + +K + + + T + +Y++ FN L+++R ++ G + +
Sbjct: 207 ILTFFNSIYWCMKSFHIENEVFHAVVTTLLNYVDAICFNELIMKRNFLSWKRGLQLNYNV 266
Query: 1365 AELELWCGEAKEEYAGSSWDELKHTRQAVGFLVIHQKTRISYDEITNDLCPVLSVQQLYR 1424
LE WC K + L+H Q L + + T I +I +C L+ QL +
Sbjct: 267 TRLEEWC---KTHGLTDGTECLQHLIQTAKLLQVRKYT-IEDIDILRGICYSLTPAQLQK 322
Query: 1425 VCTLYWDDDYNT 1436
+ + Y DY +
Sbjct: 323 LISQYQVADYES 334
>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 58
Score = 37.0 bits (84), Expect = 0.074, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 785 AASVKIQKYSRMCLARKDYHKLRSSAISIQTGLRGMAAHNDLRLMKQTKAA 835
AA ++IQK R L RK Y ++ +AI++Q +RG A + +++TKAA
Sbjct: 6 AACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAA 56
Score = 31.6 bits (70), Expect = 3.2, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 735 LGQSAIIIQSKVRSYFAHKRFNLLRCAAIQIQTLCRGQNGRYQYERMRREAAS 787
L + I IQ +R + KR+ ++ AAI +Q RG R + +RR A+
Sbjct: 4 LRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAA 56
>pdb|3EAF|A Chain A, Crystal Structure Of Abc Transporter, Substrate Binding
Protein Aeropyrum Pernix
Length = 391
Score = 32.7 bits (73), Expect = 1.5, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 263 GPAEDIEK-YKLGNPRMFHYLNQSNFYELDGVDESKEYVK 301
GP D+ K Y LG F Y N+ Y DGV + Y+K
Sbjct: 15 GPTSDVGKGYSLGAELAFKYFNEKGIYTKDGVRVNINYIK 54
>pdb|1KCF|A Chain A, Crystal Structure Of The Yeast Mitochondrial Holliday
Junction Resolvase, Ydc2
pdb|1KCF|B Chain B, Crystal Structure Of The Yeast Mitochondrial Holliday
Junction Resolvase, Ydc2
Length = 258
Score = 30.8 bits (68), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 12/65 (18%)
Query: 421 GQDPNSKVLI-----------GVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKM 469
Q+ +SKV+I LDI E F+ +S I L N L + FN HV M
Sbjct: 58 SQNEDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQLFNT-LHEKFNPHVILM 116
Query: 470 EQEEY 474
E++ Y
Sbjct: 117 ERQRY 121
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.132 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,080,303
Number of Sequences: 62578
Number of extensions: 1506739
Number of successful extensions: 5646
Number of sequences better than 100.0: 125
Number of HSP's better than 100.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 4885
Number of HSP's gapped (non-prelim): 245
length of query: 1507
length of database: 14,973,337
effective HSP length: 111
effective length of query: 1396
effective length of database: 8,027,179
effective search space: 11205941884
effective search space used: 11205941884
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)