Query 000452
Match_columns 1495
No_of_seqs 763 out of 5621
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 09:15:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000452.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000452hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 4E-277 9E-282 2638.2 149.5 1254 222-1488 122-1379(1381)
2 PLN03130 ABC transporter C fam 100.0 2E-214 4E-219 2176.2 175.0 1438 7-1487 29-1477(1622)
3 PLN03232 ABC transporter C fam 100.0 6E-210 1E-214 2134.8 174.3 1433 7-1487 29-1474(1495)
4 TIGR00957 MRP_assoc_pro multi 100.0 7E-208 2E-212 2117.2 176.5 1358 99-1484 101-1520(1522)
5 TIGR01271 CFTR_protein cystic 100.0 4E-200 9E-205 2033.8 154.0 1253 222-1486 3-1454(1490)
6 PTZ00243 ABC transporter; Prov 100.0 1E-190 3E-195 1939.0 154.2 1258 220-1487 57-1549(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 4E-143 8E-148 1356.3 114.1 1154 297-1484 21-1225(1228)
8 PTZ00265 multidrug resistance 100.0 4E-135 8E-140 1380.3 141.7 1187 290-1484 49-1465(1466)
9 KOG0058 Peptide exporter, ABC 100.0 1.6E-91 3.6E-96 843.8 59.2 548 937-1488 157-708 (716)
10 COG2274 SunT ABC-type bacterio 100.0 1.6E-84 3.6E-89 818.8 66.4 565 913-1484 142-708 (709)
11 COG1132 MdlB ABC-type multidru 100.0 2.8E-80 6.2E-85 788.2 68.0 545 932-1485 19-565 (567)
12 PRK11174 cysteine/glutathione 100.0 1.1E-78 2.4E-83 777.8 69.1 564 914-1485 11-585 (588)
13 TIGR00958 3a01208 Conjugate Tr 100.0 1.2E-78 2.6E-83 788.5 67.0 556 915-1481 151-711 (711)
14 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.3E-77 2.9E-82 779.4 71.7 544 931-1483 140-684 (686)
15 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.4E-77 3.1E-82 782.6 69.0 563 913-1481 142-709 (710)
16 TIGR01193 bacteriocin_ABC ABC- 100.0 2.2E-77 4.7E-82 780.0 68.5 560 913-1482 144-707 (708)
17 PRK10790 putative multidrug tr 100.0 1.5E-76 3.3E-81 758.2 70.9 546 932-1486 28-577 (592)
18 PRK11176 lipid transporter ATP 100.0 6.9E-76 1.5E-80 751.6 69.6 544 935-1484 33-579 (582)
19 TIGR03375 type_I_sec_LssB type 100.0 4.9E-76 1.1E-80 765.6 68.4 553 913-1472 135-689 (694)
20 PRK11160 cysteine/glutathione 100.0 2.3E-75 5.1E-80 741.8 69.0 560 915-1482 6-572 (574)
21 TIGR02203 MsbA_lipidA lipid A 100.0 1.9E-74 4E-79 737.5 69.6 547 932-1484 19-568 (571)
22 TIGR01846 type_I_sec_HlyB type 100.0 3.4E-74 7.3E-79 747.8 70.3 564 912-1483 126-691 (694)
23 COG4988 CydD ABC-type transpor 100.0 7.1E-74 1.5E-78 680.8 62.7 513 966-1486 39-557 (559)
24 KOG0055 Multidrug/pheromone ex 100.0 2.1E-75 4.6E-80 740.1 49.3 514 966-1485 70-589 (1228)
25 TIGR02868 CydC thiol reductant 100.0 1.9E-73 4.2E-78 720.5 63.7 507 932-1443 18-529 (529)
26 TIGR02204 MsbA_rel ABC transpo 100.0 1.9E-72 4.1E-77 719.4 69.9 565 914-1483 7-574 (576)
27 PRK13657 cyclic beta-1,2-gluca 100.0 2.7E-72 5.9E-77 717.9 71.1 549 929-1486 21-572 (588)
28 KOG0056 Heavy metal exporter H 100.0 3.9E-75 8.4E-80 658.7 38.1 535 940-1485 228-775 (790)
29 COG4987 CydC ABC-type transpor 100.0 1.6E-72 3.4E-77 656.4 58.4 495 981-1482 72-571 (573)
30 TIGR01192 chvA glucan exporter 100.0 6.5E-71 1.4E-75 702.0 70.9 561 916-1487 10-573 (585)
31 PRK10789 putative multidrug tr 100.0 2.4E-71 5.3E-76 704.9 65.6 511 969-1485 38-551 (569)
32 TIGR02857 CydD thiol reductant 100.0 8.1E-71 1.8E-75 696.6 64.8 518 933-1455 9-529 (529)
33 PRK11174 cysteine/glutathione 100.0 6.5E-70 1.4E-74 696.9 73.7 546 290-842 11-584 (588)
34 KOG0057 Mitochondrial Fe/S clu 100.0 5.9E-71 1.3E-75 643.3 55.7 506 967-1484 74-586 (591)
35 TIGR01842 type_I_sec_PrtD type 100.0 2E-68 4.3E-73 675.8 67.1 527 933-1471 12-542 (544)
36 COG5265 ATM1 ABC-type transpor 100.0 8.5E-71 1.8E-75 621.9 39.5 490 988-1482 3-496 (497)
37 KOG0058 Peptide exporter, ABC 100.0 2.7E-68 5.8E-73 642.8 63.5 549 292-843 138-705 (716)
38 COG2274 SunT ABC-type bacterio 100.0 1.2E-67 2.6E-72 665.9 71.4 549 288-840 141-706 (709)
39 PTZ00265 multidrug resistance 100.0 2.5E-68 5.3E-73 726.3 65.2 568 909-1484 43-728 (1466)
40 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 7.7E-67 1.7E-71 681.7 73.8 544 290-839 143-709 (710)
41 COG1123 ATPase components of v 100.0 3.5E-69 7.5E-74 644.7 46.6 465 617-1484 5-532 (539)
42 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.4E-66 3.1E-71 676.1 75.1 543 290-840 125-683 (686)
43 TIGR03375 type_I_sec_LssB type 100.0 5.2E-66 1.1E-70 671.7 73.7 538 289-831 135-689 (694)
44 TIGR00958 3a01208 Conjugate Tr 100.0 6.3E-66 1.4E-70 669.5 72.9 539 295-838 155-710 (711)
45 PRK10261 glutathione transport 100.0 7.3E-68 1.6E-72 676.6 50.2 484 616-1483 11-566 (623)
46 TIGR01193 bacteriocin_ABC ABC- 100.0 9.7E-65 2.1E-69 661.2 74.3 542 292-839 147-706 (708)
47 TIGR01194 cyc_pep_trnsptr cycl 100.0 2E-65 4.4E-70 648.4 65.8 514 935-1463 26-551 (555)
48 PRK11176 lipid transporter ATP 100.0 2.5E-64 5.4E-69 645.0 73.9 545 292-841 16-578 (582)
49 PRK15134 microcin C ABC transp 100.0 3.9E-67 8.4E-72 661.4 46.5 449 617-1474 5-518 (529)
50 TIGR02203 MsbA_lipidA lipid A 100.0 5.2E-64 1.1E-68 641.3 73.9 544 292-840 5-566 (571)
51 PRK13549 xylose transporter AT 100.0 8.1E-67 1.8E-71 655.0 43.7 439 617-1470 5-493 (506)
52 PRK09700 D-allose transporter 100.0 1.1E-66 2.5E-71 654.8 43.0 437 617-1468 5-495 (510)
53 TIGR00956 3a01205 Pleiotropic 100.0 6.8E-66 1.5E-70 702.4 53.8 249 1206-1468 717-990 (1394)
54 PRK10790 putative multidrug tr 100.0 4.1E-63 9E-68 634.3 75.7 543 292-842 14-575 (592)
55 TIGR03269 met_CoM_red_A2 methy 100.0 2.9E-66 6.2E-71 652.6 45.7 437 618-1471 1-517 (520)
56 TIGR02204 MsbA_rel ABC transpo 100.0 3E-63 6.4E-68 634.7 73.9 549 290-840 7-573 (576)
57 PRK15439 autoinducer 2 ABC tra 100.0 1.3E-65 2.9E-70 643.7 45.7 447 617-1472 11-493 (510)
58 PRK10762 D-ribose transporter 100.0 6.4E-66 1.4E-70 646.1 42.6 433 617-1470 4-483 (501)
59 PLN03232 ABC transporter C fam 100.0 1.1E-63 2.4E-68 687.7 67.7 531 935-1485 309-841 (1495)
60 PLN03130 ABC transporter C fam 100.0 1.7E-63 3.7E-68 685.1 68.1 473 992-1485 366-841 (1622)
61 PRK15064 ABC transporter ATP-b 100.0 7.4E-65 1.6E-69 640.8 49.8 201 1246-1472 318-526 (530)
62 TIGR01846 type_I_sec_HlyB type 100.0 2.5E-62 5.5E-67 636.6 75.1 547 289-840 127-690 (694)
63 TIGR02868 CydC thiol reductant 100.0 1E-62 2.2E-67 622.8 69.2 504 294-802 6-529 (529)
64 PRK13657 cyclic beta-1,2-gluca 100.0 4.2E-62 9.2E-67 624.0 74.8 541 295-842 13-570 (588)
65 PRK11160 cysteine/glutathione 100.0 3.4E-62 7.3E-67 621.3 73.0 541 295-840 10-572 (574)
66 TIGR02633 xylG D-xylose ABC tr 100.0 2.5E-65 5.4E-70 641.5 43.0 439 618-1469 2-490 (500)
67 PRK10789 putative multidrug tr 100.0 2.9E-62 6.4E-67 621.8 71.4 529 310-842 4-550 (569)
68 TIGR01257 rim_protein retinal- 100.0 7.3E-62 1.6E-66 657.5 78.5 216 1245-1472 1935-2160(2272)
69 PRK11288 araG L-arabinose tran 100.0 5.5E-65 1.2E-69 637.7 44.2 435 617-1470 4-484 (501)
70 TIGR01842 type_I_sec_PrtD type 100.0 7.3E-62 1.6E-66 615.9 69.9 521 298-830 3-542 (544)
71 PRK10938 putative molybdenum t 100.0 1.8E-64 3.9E-69 632.2 43.4 440 617-1465 3-486 (490)
72 PRK10982 galactose/methyl gala 100.0 1.9E-64 4.1E-69 631.7 43.1 432 621-1470 2-479 (491)
73 PRK10522 multidrug transporter 100.0 5.7E-62 1.2E-66 616.8 65.4 472 977-1469 58-537 (547)
74 TIGR01192 chvA glucan exporter 100.0 1.1E-60 2.5E-65 608.1 75.1 540 295-841 13-569 (585)
75 COG1132 MdlB ABC-type multidru 100.0 6.2E-61 1.3E-65 610.8 72.5 539 293-842 8-564 (567)
76 PRK11819 putative ABC transpor 100.0 7.9E-63 1.7E-67 624.3 50.1 481 617-1473 6-535 (556)
77 TIGR02857 CydD thiol reductant 100.0 1.1E-60 2.4E-65 604.3 68.2 511 299-814 1-529 (529)
78 COG4988 CydD ABC-type transpor 100.0 4.3E-60 9.3E-65 563.2 67.6 529 305-843 4-556 (559)
79 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 3.3E-62 7.2E-67 618.6 52.1 479 617-1471 4-531 (552)
80 COG4172 ABC-type uncharacteriz 100.0 1.3E-62 2.9E-67 550.5 42.5 455 616-1479 5-524 (534)
81 PRK10636 putative ABC transpor 100.0 1.6E-61 3.5E-66 618.4 50.4 199 1247-1471 312-517 (638)
82 TIGR00957 MRP_assoc_pro multi 100.0 4.8E-58 1E-62 632.8 73.4 549 289-841 952-1519(1522)
83 PRK11147 ABC transporter ATPas 100.0 9.4E-60 2E-64 603.9 50.2 198 1247-1470 319-527 (635)
84 COG4987 CydC ABC-type transpor 100.0 2.4E-57 5.2E-62 529.5 62.6 542 290-839 6-570 (573)
85 PLN03140 ABC transporter G fam 100.0 1.3E-58 2.8E-63 627.7 58.6 211 1247-1467 867-1106(1470)
86 COG4618 ArpD ABC-type protease 100.0 1.3E-58 2.9E-63 534.2 49.6 485 974-1472 70-561 (580)
87 KOG0054 Multidrug resistance-a 100.0 1.1E-57 2.3E-62 593.5 63.8 528 940-1485 214-744 (1381)
88 KOG0057 Mitochondrial Fe/S clu 100.0 4.7E-57 1E-61 527.0 58.0 520 314-840 43-584 (591)
89 PLN03073 ABC transporter F fam 100.0 1.6E-58 3.4E-63 591.4 50.2 199 1246-1469 507-712 (718)
90 PTZ00243 ABC transporter; Prov 100.0 1.1E-55 2.4E-60 607.4 71.9 470 371-842 1027-1546(1560)
91 COG0488 Uup ATPase components 100.0 1.7E-57 3.7E-62 557.1 45.3 483 617-1472 3-526 (530)
92 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.9E-55 4.1E-60 557.4 65.4 512 294-822 10-551 (555)
93 TIGR00954 3a01203 Peroxysomal 100.0 5.1E-56 1.1E-60 569.8 57.1 511 929-1457 98-653 (659)
94 COG4618 ArpD ABC-type protease 100.0 3.1E-55 6.7E-60 506.3 55.4 529 290-831 12-561 (580)
95 PRK13409 putative ATPase RIL; 100.0 1.5E-57 3.2E-62 573.4 39.1 191 1247-1465 340-536 (590)
96 KOG0056 Heavy metal exporter H 100.0 2.2E-56 4.8E-61 506.5 43.1 529 308-843 222-775 (790)
97 TIGR01271 CFTR_protein cystic 100.0 2.3E-53 4.9E-58 584.6 73.6 475 365-844 948-1454(1490)
98 PRK10522 multidrug transporter 100.0 5E-53 1.1E-57 535.2 64.9 504 291-822 3-530 (547)
99 COG1129 MglA ABC-type sugar tr 100.0 2.4E-54 5.2E-59 514.4 40.5 440 616-1468 7-487 (500)
100 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.8E-54 6E-59 496.2 26.9 238 1246-1485 1-238 (275)
101 TIGR00954 3a01203 Peroxysomal 100.0 2.9E-50 6.2E-55 516.7 59.3 503 302-816 97-653 (659)
102 COG3845 ABC-type uncharacteriz 100.0 2.9E-52 6.3E-57 484.5 34.0 440 616-1468 3-489 (501)
103 COG5265 ATM1 ABC-type transpor 100.0 8.7E-49 1.9E-53 443.6 40.2 464 370-839 10-495 (497)
104 PRK14257 phosphate ABC transpo 100.0 1.9E-50 4E-55 476.1 25.8 257 1211-1474 35-316 (329)
105 KOG0927 Predicted transporter 100.0 1.1E-45 2.3E-50 429.7 26.5 194 1247-1464 389-588 (614)
106 cd03288 ABCC_SUR2 The SUR doma 100.0 1.1E-44 2.3E-49 415.9 28.5 240 1244-1483 16-255 (257)
107 COG1135 AbcC ABC-type metal io 100.0 2.8E-45 6E-50 403.9 21.9 227 1248-1485 2-246 (339)
108 COG1126 GlnQ ABC-type polar am 100.0 7.2E-45 1.6E-49 382.3 21.5 216 1247-1475 2-229 (240)
109 PRK14257 phosphate ABC transpo 100.0 2E-44 4.4E-49 424.9 24.2 264 550-831 22-314 (329)
110 COG1126 GlnQ ABC-type polar am 100.0 3.9E-44 8.5E-49 376.7 20.2 202 617-832 2-227 (240)
111 cd03252 ABCC_Hemolysin The ABC 100.0 1.6E-43 3.6E-48 401.7 26.4 234 1248-1482 1-235 (237)
112 cd03244 ABCC_MRP_domain2 Domai 100.0 2.4E-43 5.1E-48 396.2 25.7 221 1246-1466 1-221 (221)
113 COG1117 PstB ABC-type phosphat 100.0 7.3E-44 1.6E-48 372.2 17.5 220 1246-1474 6-240 (253)
114 COG1125 OpuBA ABC-type proline 100.0 3.6E-43 7.8E-48 375.4 19.0 218 1248-1478 2-232 (309)
115 KOG0062 ATPase component of AB 100.0 3.3E-42 7.1E-47 398.7 26.8 194 1244-1463 359-560 (582)
116 cd03251 ABCC_MsbA MsbA is an e 100.0 4.8E-42 1E-46 389.0 26.0 232 1248-1480 1-233 (234)
117 cd03369 ABCC_NFT1 Domain 2 of 100.0 4.6E-42 9.9E-47 381.7 25.2 207 1242-1466 1-207 (207)
118 cd03253 ABCC_ATM1_transporter 100.0 1.2E-41 2.6E-46 386.3 26.8 233 1248-1482 1-234 (236)
119 cd03254 ABCC_Glucan_exporter_l 100.0 9.2E-42 2E-46 385.4 25.2 226 1246-1472 1-227 (229)
120 TIGR02314 ABC_MetN D-methionin 100.0 1.2E-41 2.7E-46 401.6 24.7 224 1248-1482 2-242 (343)
121 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.6E-41 5.6E-46 384.0 26.2 233 1248-1481 1-235 (238)
122 cd03245 ABCC_bacteriocin_expor 100.0 3.7E-41 7.9E-46 378.1 25.2 219 1246-1464 1-220 (220)
123 COG1124 DppF ABC-type dipeptid 100.0 3.5E-41 7.6E-46 362.2 22.5 226 1247-1483 3-243 (252)
124 KOG0065 Pleiotropic drug resis 100.0 4E-40 8.7E-45 417.8 34.9 199 1260-1468 802-1018(1391)
125 PRK13631 cbiO cobalt transport 100.0 4.4E-41 9.4E-46 395.5 23.7 218 1245-1472 19-266 (320)
126 cd03260 ABC_PstB_phosphate_tra 100.0 4E-41 8.7E-46 379.6 22.3 211 1248-1469 1-227 (227)
127 COG1120 FepC ABC-type cobalami 100.0 3.1E-41 6.8E-46 374.6 20.9 213 1247-1472 2-229 (258)
128 COG1127 Ttg2A ABC-type transpo 100.0 7.3E-41 1.6E-45 357.4 21.8 224 1246-1482 7-246 (263)
129 COG1122 CbiO ABC-type cobalt t 100.0 6.1E-41 1.3E-45 373.2 21.6 215 1247-1473 3-230 (235)
130 COG1116 TauB ABC-type nitrate/ 100.0 4.2E-41 9.2E-46 365.7 19.8 187 617-817 3-207 (248)
131 cd03261 ABC_Org_Solvent_Resist 100.0 8E-41 1.7E-45 379.2 22.6 212 1248-1472 1-227 (235)
132 COG1125 OpuBA ABC-type proline 100.0 3.2E-41 7E-46 360.4 18.0 203 618-833 2-228 (309)
133 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 7.4E-41 1.6E-45 369.4 21.1 209 1247-1472 4-228 (254)
134 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.1E-40 4.5E-45 381.3 25.0 222 617-841 2-236 (275)
135 PRK14250 phosphate ABC transpo 100.0 3.1E-40 6.8E-45 375.4 26.1 221 1247-1480 3-230 (241)
136 PRK14269 phosphate ABC transpo 100.0 2.3E-40 5E-45 377.8 24.9 218 1247-1473 2-232 (246)
137 COG1135 AbcC ABC-type metal io 100.0 8.9E-41 1.9E-45 368.3 19.3 204 617-832 1-233 (339)
138 COG3839 MalK ABC-type sugar tr 100.0 1.9E-40 4.1E-45 381.9 22.6 217 1247-1478 3-230 (338)
139 PRK13650 cbiO cobalt transport 100.0 2.7E-40 5.9E-45 383.5 23.5 215 1247-1472 4-230 (279)
140 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3.1E-40 6.8E-45 364.5 22.7 199 617-831 4-228 (254)
141 cd03248 ABCC_TAP TAP, the Tran 100.0 2.8E-40 6E-45 372.6 22.8 217 1244-1460 8-226 (226)
142 PRK11153 metN DL-methionine tr 100.0 4.6E-40 9.9E-45 391.2 24.9 220 1248-1478 2-237 (343)
143 COG1120 FepC ABC-type cobalami 100.0 2.4E-40 5.3E-45 367.5 20.4 201 617-831 2-229 (258)
144 cd03263 ABC_subfamily_A The AB 100.0 3.1E-40 6.7E-45 370.7 21.5 210 1248-1469 1-219 (220)
145 PRK13637 cbiO cobalt transport 100.0 4.4E-40 9.4E-45 383.1 23.4 215 1247-1472 2-235 (287)
146 cd03250 ABCC_MRP_domain1 Domai 100.0 5.6E-40 1.2E-44 364.1 23.0 199 1248-1459 1-204 (204)
147 PRK10744 pstB phosphate transp 100.0 1E-39 2.2E-44 375.5 26.0 221 1245-1474 11-247 (260)
148 PRK11650 ugpC glycerol-3-phosp 100.0 7.5E-40 1.6E-44 389.8 25.3 217 1247-1477 3-230 (356)
149 PRK14242 phosphate transporter 100.0 9.9E-40 2.1E-44 374.4 24.6 219 1247-1474 6-240 (253)
150 PRK13635 cbiO cobalt transport 100.0 7.7E-40 1.7E-44 379.5 23.9 215 1247-1472 5-230 (279)
151 COG2884 FtsE Predicted ATPase 100.0 3E-40 6.5E-45 339.3 17.9 207 1248-1466 2-221 (223)
152 PRK14273 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 374.1 24.8 222 1247-1477 7-244 (254)
153 cd03296 ABC_CysA_sulfate_impor 100.0 1.1E-39 2.4E-44 370.7 24.4 212 1247-1473 2-228 (239)
154 TIGR00972 3a0107s01c2 phosphat 100.0 1.2E-39 2.7E-44 372.2 24.8 221 1248-1477 2-238 (247)
155 PRK11432 fbpC ferric transport 100.0 9.8E-40 2.1E-44 387.6 24.9 217 1246-1477 5-232 (351)
156 PRK13647 cbiO cobalt transport 100.0 7.1E-40 1.5E-44 379.0 23.0 212 1247-1470 4-226 (274)
157 cd03256 ABC_PhnC_transporter A 100.0 7E-40 1.5E-44 373.0 22.4 211 1248-1470 1-233 (241)
158 COG1136 SalX ABC-type antimicr 100.0 1.4E-39 3.1E-44 354.6 23.5 204 1248-1462 2-222 (226)
159 cd03219 ABC_Mj1267_LivG_branch 100.0 7.5E-40 1.6E-44 371.6 22.2 212 1248-1472 1-233 (236)
160 TIGR00960 3a0501s02 Type II (G 100.0 5.4E-40 1.2E-44 367.6 20.7 202 1248-1460 2-216 (216)
161 PRK14259 phosphate ABC transpo 100.0 2.6E-39 5.6E-44 373.5 26.2 222 1243-1473 9-255 (269)
162 COG3638 ABC-type phosphate/pho 100.0 7.1E-40 1.5E-44 349.0 19.7 212 1247-1470 3-236 (258)
163 cd03291 ABCC_CFTR1 The CFTR su 100.0 4.8E-39 1E-43 371.3 28.3 218 1245-1480 37-255 (282)
164 cd03258 ABC_MetN_methionine_tr 100.0 1E-39 2.2E-44 369.8 22.2 214 1248-1472 2-231 (233)
165 TIGR01186 proV glycine betaine 100.0 7.2E-40 1.6E-44 388.5 21.9 205 1262-1477 6-225 (363)
166 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.4E-39 3E-44 370.6 23.4 215 1248-1474 1-228 (242)
167 COG1127 Ttg2A ABC-type transpo 100.0 1.6E-39 3.5E-44 347.1 21.9 205 615-834 6-239 (263)
168 COG4178 ABC-type uncharacteriz 100.0 9.7E-37 2.1E-41 370.2 49.0 467 968-1457 87-588 (604)
169 PRK14267 phosphate ABC transpo 100.0 1.8E-39 3.8E-44 372.3 23.7 219 1247-1474 4-240 (253)
170 TIGR03265 PhnT2 putative 2-ami 100.0 1.5E-39 3.3E-44 386.7 23.9 217 1247-1478 4-231 (353)
171 PRK14235 phosphate transporter 100.0 2.9E-39 6.4E-44 372.8 25.4 222 1244-1474 16-254 (267)
172 TIGR02315 ABC_phnC phosphonate 100.0 1.3E-39 2.9E-44 371.2 22.2 211 1248-1470 2-234 (243)
173 PRK13643 cbiO cobalt transport 100.0 1.6E-39 3.5E-44 378.5 23.2 214 1248-1472 2-234 (288)
174 PRK13646 cbiO cobalt transport 100.0 1.6E-39 3.4E-44 378.4 23.1 216 1247-1472 2-236 (286)
175 PRK14247 phosphate ABC transpo 100.0 3E-39 6.6E-44 369.7 24.9 222 1247-1477 3-240 (250)
176 PRK13632 cbiO cobalt transport 100.0 2.5E-39 5.5E-44 374.2 24.3 215 1247-1472 7-232 (271)
177 PRK13636 cbiO cobalt transport 100.0 2.1E-39 4.5E-44 376.9 23.5 214 1247-1472 5-232 (283)
178 cd03259 ABC_Carb_Solutes_like 100.0 1.3E-39 2.7E-44 363.8 20.7 202 1248-1464 1-213 (213)
179 PRK11629 lolD lipoprotein tran 100.0 2.2E-39 4.9E-44 366.8 23.0 208 1247-1465 5-228 (233)
180 COG4615 PvdE ABC-type sideroph 100.0 1.1E-36 2.5E-41 340.8 43.8 469 970-1464 51-530 (546)
181 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.1E-39 6.8E-44 366.3 23.8 211 1248-1472 2-222 (236)
182 cd03247 ABCC_cytochrome_bd The 100.0 1.8E-39 3.9E-44 352.0 20.8 178 1248-1464 1-178 (178)
183 cd03224 ABC_TM1139_LivF_branch 100.0 2.4E-39 5.1E-44 364.0 22.4 212 1248-1471 1-221 (222)
184 PRK10851 sulfate/thiosulfate t 100.0 3.8E-39 8.3E-44 383.3 25.3 216 1247-1477 2-232 (353)
185 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.1E-39 4.5E-44 374.3 22.4 217 1249-1478 26-257 (269)
186 PRK14237 phosphate transporter 100.0 5.3E-39 1.2E-43 370.7 25.7 219 1246-1473 19-253 (267)
187 PRK14245 phosphate ABC transpo 100.0 3.3E-39 7.1E-44 369.4 23.6 219 1247-1474 3-237 (250)
188 PRK14244 phosphate ABC transpo 100.0 1.8E-39 4E-44 371.6 21.5 221 1248-1477 6-243 (251)
189 PRK14251 phosphate ABC transpo 100.0 2.9E-39 6.2E-44 370.1 23.1 222 1247-1477 4-241 (251)
190 PRK13640 cbiO cobalt transport 100.0 4.8E-39 1E-43 373.6 25.1 216 1246-1472 4-233 (282)
191 PRK15079 oligopeptide ABC tran 100.0 5E-39 1.1E-43 379.4 25.5 223 1247-1479 8-259 (331)
192 COG1117 PstB ABC-type phosphat 100.0 6.1E-40 1.3E-44 342.9 15.4 205 616-831 6-238 (253)
193 PRK10619 histidine/lysine/argi 100.0 5.1E-39 1.1E-43 369.1 24.6 217 1245-1473 3-243 (257)
194 PRK11308 dppF dipeptide transp 100.0 6.5E-39 1.4E-43 378.2 26.1 224 1247-1480 5-253 (327)
195 COG3839 MalK ABC-type sugar tr 100.0 2.1E-39 4.4E-44 373.3 21.2 202 617-832 3-225 (338)
196 PRK14268 phosphate ABC transpo 100.0 3.9E-39 8.5E-44 370.2 23.5 222 1247-1477 12-248 (258)
197 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.9E-39 4.2E-44 363.7 20.4 202 1248-1460 1-218 (218)
198 cd03266 ABC_NatA_sodium_export 100.0 3.7E-39 8E-44 361.4 22.2 205 1248-1464 2-218 (218)
199 PRK14262 phosphate ABC transpo 100.0 5.9E-39 1.3E-43 367.3 24.3 223 1247-1478 3-241 (250)
200 TIGR03258 PhnT 2-aminoethylpho 100.0 4.6E-39 9.9E-44 383.0 24.0 218 1245-1477 3-234 (362)
201 cd03265 ABC_DrrA DrrA is the A 100.0 4.4E-39 9.5E-44 361.2 22.5 208 1248-1469 1-219 (220)
202 COG3842 PotA ABC-type spermidi 100.0 1.7E-39 3.7E-44 375.9 19.6 203 616-832 4-228 (352)
203 PRK14239 phosphate transporter 100.0 7.4E-39 1.6E-43 367.0 24.7 219 1247-1474 5-239 (252)
204 PRK14266 phosphate ABC transpo 100.0 6.6E-39 1.4E-43 366.9 24.1 222 1247-1477 3-240 (250)
205 PRK11831 putative ABC transpor 100.0 9.3E-39 2E-43 369.1 25.5 223 1247-1482 7-244 (269)
206 PRK14256 phosphate ABC transpo 100.0 9.5E-39 2.1E-43 366.0 25.3 222 1245-1475 2-240 (252)
207 TIGR03005 ectoine_ehuA ectoine 100.0 6.2E-39 1.3E-43 367.5 23.8 214 1248-1474 1-239 (252)
208 cd03291 ABCC_CFTR1 The CFTR su 100.0 2.5E-38 5.3E-43 365.4 28.9 215 613-832 35-249 (282)
209 PRK13651 cobalt transporter AT 100.0 5.9E-39 1.3E-43 375.3 24.0 215 1247-1472 2-255 (305)
210 PRK14274 phosphate ABC transpo 100.0 9.4E-39 2E-43 367.4 25.3 220 1247-1475 12-247 (259)
211 PRK14240 phosphate transporter 100.0 1.1E-38 2.3E-43 365.2 25.5 220 1246-1474 2-237 (250)
212 PRK11000 maltose/maltodextrin 100.0 5.6E-39 1.2E-43 384.9 24.2 216 1247-1477 3-229 (369)
213 PRK13634 cbiO cobalt transport 100.0 5.6E-39 1.2E-43 374.3 23.3 216 1247-1472 2-236 (290)
214 PRK13648 cbiO cobalt transport 100.0 5.7E-39 1.2E-43 371.0 23.2 215 1247-1472 7-232 (269)
215 TIGR03411 urea_trans_UrtD urea 100.0 6.3E-39 1.4E-43 365.3 23.2 212 1247-1471 2-231 (242)
216 PRK09536 btuD corrinoid ABC tr 100.0 6E-39 1.3E-43 385.1 24.2 213 1247-1472 3-229 (402)
217 PRK13644 cbiO cobalt transport 100.0 7.1E-39 1.5E-43 370.6 24.0 213 1248-1472 2-225 (274)
218 cd03264 ABC_drug_resistance_li 100.0 3.3E-39 7.2E-44 359.9 20.4 202 1248-1464 1-211 (211)
219 COG1116 TauB ABC-type nitrate/ 100.0 5.5E-39 1.2E-43 349.2 21.5 221 1247-1486 3-239 (248)
220 COG1118 CysA ABC-type sulfate/ 100.0 2E-39 4.3E-44 356.5 18.2 202 617-832 2-229 (345)
221 PRK09452 potA putrescine/sperm 100.0 1E-38 2.2E-43 381.4 25.6 217 1246-1477 13-240 (375)
222 PRK14248 phosphate ABC transpo 100.0 1.2E-38 2.6E-43 368.3 25.4 219 1247-1474 21-255 (268)
223 PRK13633 cobalt transporter AT 100.0 8.1E-39 1.8E-43 371.5 24.0 215 1247-1472 4-234 (280)
224 PRK13642 cbiO cobalt transport 100.0 9.6E-39 2.1E-43 370.3 24.6 215 1247-1472 4-230 (277)
225 COG3840 ThiQ ABC-type thiamine 100.0 4.5E-39 9.7E-44 327.5 18.9 210 1248-1474 2-222 (231)
226 PRK14254 phosphate ABC transpo 100.0 1.6E-38 3.5E-43 369.3 26.3 220 1246-1474 38-272 (285)
227 PRK14260 phosphate ABC transpo 100.0 9.5E-39 2.1E-43 367.2 24.0 220 1246-1474 6-246 (259)
228 TIGR02211 LolD_lipo_ex lipopro 100.0 8.3E-39 1.8E-43 359.3 23.0 203 1248-1461 2-220 (221)
229 cd03268 ABC_BcrA_bacitracin_re 100.0 5.5E-39 1.2E-43 357.3 21.2 202 1248-1464 1-208 (208)
230 PRK14249 phosphate ABC transpo 100.0 1.5E-38 3.2E-43 364.2 25.3 219 1247-1474 4-238 (251)
231 PRK14236 phosphate transporter 100.0 1.4E-38 3.1E-43 368.1 25.4 220 1245-1473 23-258 (272)
232 cd03290 ABCC_SUR1_N The SUR do 100.0 9.2E-39 2E-43 358.1 22.9 210 1249-1459 2-218 (218)
233 PRK11264 putative amino-acid A 100.0 1.5E-38 3.3E-43 364.0 25.0 215 1247-1474 3-236 (250)
234 PRK14238 phosphate transporter 100.0 1.8E-38 4E-43 366.8 25.9 221 1245-1474 22-258 (271)
235 PRK09493 glnQ glutamine ABC tr 100.0 8.8E-39 1.9E-43 363.6 22.9 213 1248-1473 2-227 (240)
236 PRK11124 artP arginine transpo 100.0 9.7E-39 2.1E-43 363.7 23.2 214 1247-1473 2-232 (242)
237 cd03226 ABC_cobalt_CbiO_domain 100.0 6.5E-39 1.4E-43 355.8 21.2 198 1249-1461 1-205 (205)
238 PRK13652 cbiO cobalt transport 100.0 1E-38 2.3E-43 370.1 23.8 214 1247-1472 3-228 (277)
239 PRK14270 phosphate ABC transpo 100.0 1.6E-38 3.4E-43 363.9 24.9 218 1247-1473 4-237 (251)
240 PRK11022 dppD dipeptide transp 100.0 1.6E-38 3.5E-43 375.1 25.6 226 1247-1480 3-252 (326)
241 cd03252 ABCC_Hemolysin The ABC 100.0 2.1E-38 4.6E-43 359.8 25.5 218 618-837 1-232 (237)
242 cd03250 ABCC_MRP_domain1 Domai 100.0 1.3E-38 2.8E-43 353.2 23.0 201 618-818 1-204 (204)
243 COG1136 SalX ABC-type antimicr 100.0 1.2E-38 2.6E-43 347.4 22.3 193 618-820 2-221 (226)
244 PRK14271 phosphate ABC transpo 100.0 2.5E-38 5.3E-43 366.3 26.3 219 1247-1474 21-254 (276)
245 PRK10575 iron-hydroxamate tran 100.0 9E-39 1.9E-43 368.6 22.6 212 1247-1471 11-237 (265)
246 cd03225 ABC_cobalt_CbiO_domain 100.0 5.2E-39 1.1E-43 358.4 19.7 200 1249-1459 1-211 (211)
247 PRK13537 nodulation ABC transp 100.0 9.5E-39 2.1E-43 374.4 22.8 213 1246-1472 6-228 (306)
248 PRK14252 phosphate ABC transpo 100.0 1.7E-38 3.6E-43 366.5 24.5 222 1243-1473 12-251 (265)
249 cd03292 ABC_FtsE_transporter F 100.0 6.3E-39 1.4E-43 358.5 20.2 201 1248-1460 1-214 (214)
250 cd03300 ABC_PotA_N PotA is an 100.0 8.2E-39 1.8E-43 361.8 21.2 211 1248-1473 1-222 (232)
251 cd03218 ABC_YhbG The ABC trans 100.0 8.9E-39 1.9E-43 361.8 21.5 211 1248-1471 1-222 (232)
252 cd03293 ABC_NrtD_SsuB_transpor 100.0 7.2E-39 1.6E-43 359.5 20.4 203 1248-1466 1-218 (220)
253 cd03301 ABC_MalK_N The N-termi 100.0 7.5E-39 1.6E-43 357.6 20.2 202 1248-1464 1-213 (213)
254 PRK14243 phosphate transporter 100.0 2.4E-38 5.2E-43 364.6 25.0 219 1247-1474 10-251 (264)
255 TIGR02673 FtsE cell division A 100.0 6.3E-39 1.4E-43 358.5 19.5 200 1248-1459 2-214 (214)
256 PRK14261 phosphate ABC transpo 100.0 2.4E-38 5.2E-43 362.9 24.7 219 1247-1474 6-240 (253)
257 PRK11231 fecE iron-dicitrate t 100.0 1.3E-38 2.8E-43 365.4 22.5 211 1248-1471 3-227 (255)
258 TIGR02769 nickel_nikE nickel i 100.0 2.5E-38 5.4E-43 364.9 24.8 225 1247-1481 2-250 (265)
259 PRK10070 glycine betaine trans 100.0 1.6E-38 3.4E-43 381.3 23.9 204 1263-1477 42-260 (400)
260 PRK13649 cbiO cobalt transport 100.0 1.8E-38 3.9E-43 369.2 23.4 215 1248-1472 3-235 (280)
261 TIGR03410 urea_trans_UrtE urea 100.0 1.8E-38 3.9E-43 358.8 22.5 211 1248-1470 1-220 (230)
262 PRK11614 livF leucine/isoleuci 100.0 2.1E-38 4.5E-43 359.9 23.1 212 1247-1471 5-226 (237)
263 COG3842 PotA ABC-type spermidi 100.0 9.2E-39 2E-43 369.8 20.5 218 1246-1478 4-233 (352)
264 cd03246 ABCC_Protease_Secretio 100.0 1.5E-38 3.2E-43 343.1 20.8 172 1248-1460 1-173 (173)
265 PRK13645 cbiO cobalt transport 100.0 1.6E-38 3.4E-43 371.0 22.7 217 1245-1472 4-241 (289)
266 PRK09473 oppD oligopeptide tra 100.0 3.3E-38 7.2E-43 372.7 25.6 226 1247-1480 12-260 (330)
267 PRK13641 cbiO cobalt transport 100.0 2.7E-38 5.8E-43 368.3 24.4 215 1247-1472 2-235 (287)
268 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.2E-38 4.8E-43 353.3 22.2 200 1248-1464 1-211 (211)
269 TIGR00968 3a0106s01 sulfate AB 100.0 3E-38 6.5E-43 358.3 23.7 210 1248-1472 1-221 (237)
270 PRK10253 iron-enterobactin tra 100.0 2.2E-38 4.8E-43 365.3 22.9 213 1246-1471 6-233 (265)
271 cd03299 ABC_ModC_like Archeal 100.0 2.3E-38 4.9E-43 358.8 22.5 210 1248-1473 1-221 (235)
272 PRK10584 putative ABC transpor 100.0 2.8E-38 6.1E-43 356.7 23.0 206 1247-1463 6-227 (228)
273 PRK14253 phosphate ABC transpo 100.0 4.3E-38 9.4E-43 360.0 24.8 218 1247-1473 3-235 (249)
274 PRK14258 phosphate ABC transpo 100.0 3.8E-38 8.2E-43 362.5 24.4 221 1246-1475 6-249 (261)
275 PRK11247 ssuB aliphatic sulfon 100.0 3.4E-38 7.3E-43 360.7 23.7 203 1247-1467 12-219 (257)
276 PRK13639 cbiO cobalt transport 100.0 2.9E-38 6.4E-43 365.9 23.4 213 1248-1472 2-227 (275)
277 PRK14264 phosphate ABC transpo 100.0 3.6E-38 7.9E-43 369.9 24.5 220 1245-1473 43-291 (305)
278 PRK14263 phosphate ABC transpo 100.0 4.6E-38 1E-42 361.3 24.8 219 1247-1474 8-248 (261)
279 PRK14241 phosphate transporter 100.0 3.3E-38 7.3E-43 362.6 23.6 219 1247-1474 4-245 (258)
280 PRK10895 lipopolysaccharide AB 100.0 3.8E-38 8.3E-43 358.6 23.8 213 1247-1472 3-227 (241)
281 PRK14265 phosphate ABC transpo 100.0 6.3E-38 1.4E-42 362.8 25.8 220 1246-1474 19-261 (274)
282 PRK14255 phosphate ABC transpo 100.0 4.1E-38 8.8E-43 360.8 23.8 222 1247-1477 5-242 (252)
283 cd03235 ABC_Metallic_Cations A 100.0 1.4E-38 3E-43 355.4 19.5 197 1249-1464 1-213 (213)
284 PRK13548 hmuV hemin importer A 100.0 5.1E-38 1.1E-42 360.7 24.5 212 1247-1471 2-230 (258)
285 COG3638 ABC-type phosphate/pho 100.0 1.2E-38 2.6E-43 339.6 17.7 200 617-829 3-236 (258)
286 PRK13638 cbiO cobalt transport 100.0 2.6E-38 5.6E-43 366.0 22.1 212 1248-1472 2-226 (271)
287 PRK11607 potG putrescine trans 100.0 5E-38 1.1E-42 376.0 24.9 218 1246-1478 18-246 (377)
288 PRK15112 antimicrobial peptide 100.0 3.8E-38 8.2E-43 363.6 23.1 228 1247-1484 4-253 (267)
289 PRK14275 phosphate ABC transpo 100.0 5.7E-38 1.2E-42 365.1 24.6 224 1245-1477 37-276 (286)
290 PRK11300 livG leucine/isoleuci 100.0 4.2E-38 9E-43 361.5 23.2 212 1247-1471 5-243 (255)
291 PRK10771 thiQ thiamine transpo 100.0 7.5E-38 1.6E-42 354.1 24.7 208 1248-1472 2-220 (232)
292 cd03257 ABC_NikE_OppD_transpor 100.0 5.4E-38 1.2E-42 354.5 23.4 207 1248-1464 2-228 (228)
293 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 7.6E-38 1.6E-42 355.6 24.7 214 618-832 1-228 (238)
294 PRK14272 phosphate ABC transpo 100.0 6.3E-38 1.4E-42 359.3 24.2 222 1247-1477 4-242 (252)
295 PRK15093 antimicrobial peptide 100.0 6.9E-38 1.5E-42 370.9 25.1 225 1247-1479 3-256 (330)
296 cd03269 ABC_putative_ATPase Th 100.0 2.1E-38 4.5E-43 353.2 19.5 200 1248-1464 1-210 (210)
297 PRK13536 nodulation factor exp 100.0 3.3E-38 7.1E-43 373.5 22.1 212 1247-1472 41-262 (340)
298 TIGR01288 nodI ATP-binding ABC 100.0 4.9E-38 1.1E-42 368.9 23.1 212 1247-1472 4-225 (303)
299 TIGR03522 GldA_ABC_ATP gliding 100.0 4.8E-38 1.1E-42 368.4 23.0 211 1248-1472 3-222 (301)
300 PRK10908 cell division protein 100.0 8.4E-38 1.8E-42 351.3 23.8 203 1248-1462 2-217 (222)
301 TIGR03873 F420-0_ABC_ATP propo 100.0 5.1E-38 1.1E-42 360.7 22.5 211 1248-1471 2-226 (256)
302 cd03251 ABCC_MsbA MsbA is an e 100.0 1.4E-37 3E-42 352.5 25.1 213 618-832 1-227 (234)
303 COG1122 CbiO ABC-type cobalt t 100.0 4E-38 8.7E-43 350.6 20.3 202 617-831 3-229 (235)
304 TIGR01277 thiQ thiamine ABC tr 100.0 6.1E-38 1.3E-42 350.1 21.9 201 1248-1465 1-212 (213)
305 TIGR03415 ABC_choXWV_ATP choli 100.0 7.2E-38 1.6E-42 372.9 23.7 204 1263-1477 38-260 (382)
306 cd03254 ABCC_Glucan_exporter_l 100.0 1.5E-37 3.2E-42 351.2 24.8 211 617-830 2-226 (229)
307 PRK10247 putative ABC transpor 100.0 6.5E-38 1.4E-42 352.7 21.8 209 1247-1467 7-223 (225)
308 cd03262 ABC_HisP_GlnQ_permease 100.0 4.1E-38 9E-43 351.6 19.8 200 1248-1460 1-213 (213)
309 PRK11701 phnK phosphonate C-P 100.0 1.6E-37 3.4E-42 357.1 25.1 221 1247-1479 6-249 (258)
310 PRK10418 nikD nickel transport 100.0 1.6E-37 3.5E-42 356.0 24.8 223 1247-1482 4-242 (254)
311 cd03288 ABCC_SUR2 The SUR doma 100.0 2.4E-37 5.2E-42 355.1 26.0 215 616-832 18-245 (257)
312 cd03253 ABCC_ATM1_transporter 100.0 2.1E-37 4.5E-42 351.6 25.2 213 618-833 1-227 (236)
313 TIGR01978 sufC FeS assembly AT 100.0 8.4E-38 1.8E-42 356.4 21.9 212 1248-1470 1-233 (243)
314 PRK14246 phosphate ABC transpo 100.0 1.6E-37 3.6E-42 355.9 24.3 223 1247-1478 10-248 (257)
315 PRK11144 modC molybdate transp 100.0 1.5E-37 3.3E-42 370.9 24.1 212 1248-1475 2-222 (352)
316 TIGR01188 drrA daunorubicin re 100.0 9.1E-38 2E-42 366.5 21.5 203 1256-1472 2-214 (302)
317 COG1131 CcmA ABC-type multidru 100.0 8.9E-38 1.9E-42 362.7 21.2 213 1247-1472 4-227 (293)
318 cd03244 ABCC_MRP_domain2 Domai 100.0 2.8E-37 6E-42 347.0 24.4 206 617-824 2-220 (221)
319 PRK11650 ugpC glycerol-3-phosp 100.0 1.7E-37 3.8E-42 369.5 23.7 203 617-832 3-226 (356)
320 TIGR02314 ABC_MetN D-methionin 100.0 1.2E-37 2.7E-42 367.7 22.0 202 618-831 2-231 (343)
321 PRK13547 hmuV hemin importer A 100.0 2.2E-37 4.9E-42 356.8 23.6 211 1248-1471 2-244 (272)
322 COG3840 ThiQ ABC-type thiamine 100.0 1.4E-37 3E-42 316.6 18.3 197 618-831 2-220 (231)
323 PRK09984 phosphonate/organopho 100.0 4.5E-37 9.7E-42 354.1 24.2 221 1247-1483 4-251 (262)
324 cd03261 ABC_Org_Solvent_Resist 100.0 2.6E-37 5.7E-42 350.4 21.6 199 618-831 1-227 (235)
325 cd03245 ABCC_bacteriocin_expor 100.0 6.5E-37 1.4E-41 343.7 24.4 205 617-823 2-220 (220)
326 COG1124 DppF ABC-type dipeptid 100.0 3.3E-37 7.1E-42 331.7 20.9 205 617-831 3-232 (252)
327 PRK11248 tauB taurine transpor 100.0 3.4E-37 7.4E-42 352.9 22.3 201 1248-1466 2-215 (255)
328 TIGR03740 galliderm_ABC gallid 100.0 6.3E-37 1.4E-41 344.5 23.8 204 1248-1468 1-210 (223)
329 TIGR02982 heterocyst_DevA ABC 100.0 2.2E-37 4.7E-42 347.5 19.7 202 1248-1460 2-219 (220)
330 TIGR01186 proV glycine betaine 100.0 1.7E-37 3.7E-42 368.2 19.9 190 632-832 5-221 (363)
331 PRK13631 cbiO cobalt transport 100.0 5.2E-37 1.1E-41 361.0 23.7 206 616-831 20-266 (320)
332 PRK11432 fbpC ferric transport 100.0 4.2E-37 9.2E-42 365.1 23.1 202 617-832 6-228 (351)
333 PRK00349 uvrA excinuclease ABC 100.0 2.9E-36 6.4E-41 390.6 32.7 228 1247-1483 614-939 (943)
334 PRK10419 nikE nickel transport 100.0 7.5E-37 1.6E-41 352.8 24.2 221 1247-1478 3-247 (268)
335 cd03228 ABCC_MRP_Like The MRP 100.0 4.1E-37 8.9E-42 331.3 20.4 171 1248-1459 1-171 (171)
336 TIGR02142 modC_ABC molybdenum 100.0 5.3E-37 1.1E-41 366.9 23.2 212 1252-1478 4-228 (354)
337 cd03230 ABC_DR_subfamily_A Thi 100.0 6.3E-37 1.4E-41 330.5 19.8 170 1248-1460 1-173 (173)
338 COG4615 PvdE ABC-type sideroph 100.0 5.6E-34 1.2E-38 319.3 43.8 502 292-822 4-529 (546)
339 TIGR02323 CP_lyasePhnK phospho 100.0 2.1E-36 4.6E-41 346.8 25.2 221 1247-1479 3-246 (253)
340 TIGR03265 PhnT2 putative 2-ami 100.0 7.4E-37 1.6E-41 363.7 22.0 202 617-832 4-226 (353)
341 PRK13643 cbiO cobalt transport 100.0 1E-36 2.2E-41 355.0 22.6 202 618-830 2-233 (288)
342 COG0410 LivF ABC-type branched 100.0 7.5E-37 1.6E-41 326.9 19.5 220 1247-1473 3-228 (237)
343 cd03217 ABC_FeS_Assembly ABC-t 100.0 1.2E-36 2.5E-41 336.2 21.6 185 1248-1470 1-192 (200)
344 PRK13634 cbiO cobalt transport 100.0 1.1E-36 2.4E-41 355.1 22.4 203 618-831 3-236 (290)
345 PRK09452 potA putrescine/sperm 100.0 1.3E-36 2.9E-41 363.1 23.6 203 616-832 13-236 (375)
346 cd03229 ABC_Class3 This class 100.0 9.9E-37 2.2E-41 330.5 20.4 172 1248-1459 1-178 (178)
347 PRK09544 znuC high-affinity zi 100.0 2E-36 4.3E-41 345.4 23.9 208 1247-1481 4-217 (251)
348 cd03296 ABC_CysA_sulfate_impor 100.0 1.6E-36 3.5E-41 344.8 23.0 198 618-830 3-226 (239)
349 COG0444 DppD ABC-type dipeptid 100.0 1.1E-36 2.3E-41 342.2 21.0 227 1248-1482 2-254 (316)
350 COG1118 CysA ABC-type sulfate/ 100.0 6.7E-37 1.5E-41 336.6 18.7 217 1247-1478 2-234 (345)
351 PRK13637 cbiO cobalt transport 100.0 1.2E-36 2.5E-41 354.4 21.9 204 617-830 2-234 (287)
352 cd03234 ABCG_White The White s 100.0 1.2E-36 2.6E-41 342.8 21.3 203 1248-1464 4-226 (226)
353 COG2884 FtsE Predicted ATPase 100.0 7.5E-37 1.6E-41 314.4 17.6 193 618-823 2-219 (223)
354 PRK13650 cbiO cobalt transport 100.0 2E-36 4.3E-41 351.2 23.3 203 617-831 4-230 (279)
355 cd03219 ABC_Mj1267_LivG_branch 100.0 1.2E-36 2.7E-41 345.2 21.1 199 618-830 1-232 (236)
356 PRK10851 sulfate/thiosulfate t 100.0 1.6E-36 3.6E-41 360.8 23.0 202 617-832 2-228 (353)
357 TIGR03258 PhnT 2-aminoethylpho 100.0 1.2E-36 2.6E-41 362.3 21.4 203 616-832 4-230 (362)
358 PRK11000 maltose/maltodextrin 100.0 1.7E-36 3.8E-41 363.4 22.7 201 617-831 3-224 (369)
359 PRK15056 manganese/iron transp 100.0 2.5E-36 5.5E-41 349.4 23.0 208 1247-1471 6-230 (272)
360 cd03259 ABC_Carb_Solutes_like 100.0 1.6E-36 3.4E-41 338.9 20.5 191 618-823 1-213 (213)
361 PRK13651 cobalt transporter AT 100.0 2.6E-36 5.7E-41 353.1 23.0 203 618-831 3-255 (305)
362 cd03233 ABC_PDR_domain1 The pl 100.0 2E-36 4.3E-41 334.7 20.8 190 1247-1464 3-202 (202)
363 cd03297 ABC_ModC_molybdenum_tr 100.0 1.6E-36 3.4E-41 339.0 20.2 200 1248-1464 2-214 (214)
364 cd03265 ABC_DrrA DrrA is the A 100.0 1.7E-36 3.8E-41 340.2 20.4 197 618-828 1-219 (220)
365 cd03290 ABCC_SUR1_N The SUR do 100.0 3.9E-36 8.4E-41 336.9 23.0 198 619-818 2-218 (218)
366 cd03215 ABC_Carb_Monos_II This 100.0 1.4E-36 3E-41 330.5 18.8 172 1247-1460 4-182 (182)
367 TIGR00960 3a0501s02 Type II (G 100.0 1.5E-36 3.3E-41 339.7 19.4 189 618-819 2-216 (216)
368 PRK13646 cbiO cobalt transport 100.0 2.5E-36 5.4E-41 351.6 21.8 204 617-831 2-236 (286)
369 PRK13537 nodulation ABC transp 100.0 2.8E-36 6E-41 353.6 22.2 201 616-831 6-228 (306)
370 cd03260 ABC_PstB_phosphate_tra 100.0 1.8E-36 3.8E-41 341.9 19.8 195 618-827 1-226 (227)
371 cd03213 ABCG_EPDR ABCG transpo 100.0 1.9E-36 4.1E-41 332.7 19.4 182 1247-1464 3-194 (194)
372 TIGR03608 L_ocin_972_ABC putat 100.0 1.4E-36 2.9E-41 337.6 18.4 193 1250-1455 1-206 (206)
373 CHL00131 ycf16 sulfate ABC tra 100.0 4.3E-36 9.4E-41 344.1 23.0 212 1247-1469 7-239 (252)
374 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.5E-36 5.5E-41 338.9 20.5 196 618-825 1-218 (220)
375 PRK14250 phosphate ABC transpo 100.0 5.9E-36 1.3E-40 340.4 23.6 201 617-831 3-222 (241)
376 TIGR02315 ABC_phnC phosphonate 100.0 4.4E-36 9.6E-41 342.2 22.5 197 618-828 2-233 (243)
377 cd03223 ABCD_peroxisomal_ALDP 100.0 3.2E-36 6.8E-41 322.5 19.9 164 1248-1459 1-164 (166)
378 cd03268 ABC_BcrA_bacitracin_re 100.0 3.9E-36 8.6E-41 334.4 21.5 191 618-823 1-208 (208)
379 cd03232 ABC_PDR_domain2 The pl 100.0 1.9E-36 4.1E-41 332.3 18.6 181 1247-1464 3-192 (192)
380 PRK13647 cbiO cobalt transport 100.0 3.7E-36 8E-41 348.0 21.9 198 617-828 4-225 (274)
381 cd03256 ABC_PhnC_transporter A 100.0 3.8E-36 8.3E-41 342.3 21.6 199 618-829 1-233 (241)
382 cd03226 ABC_cobalt_CbiO_domain 100.0 2.8E-36 6E-41 334.8 19.9 187 620-820 2-205 (205)
383 TIGR02770 nickel_nikD nickel i 100.0 3.3E-36 7.1E-41 340.2 20.6 206 1264-1479 1-223 (230)
384 PRK11153 metN DL-methionine tr 100.0 3.9E-36 8.5E-41 357.6 22.2 202 618-831 2-231 (343)
385 cd03263 ABC_subfamily_A The AB 100.0 5.2E-36 1.1E-40 336.4 21.2 198 618-828 1-219 (220)
386 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 3.3E-36 7.2E-41 337.5 19.6 190 618-819 1-218 (218)
387 TIGR00972 3a0107s01c2 phosphat 100.0 6.5E-36 1.4E-40 341.5 22.4 204 617-831 1-233 (247)
388 PRK11607 potG putrescine trans 100.0 5.4E-36 1.2E-40 358.6 22.7 203 616-832 18-241 (377)
389 cd03214 ABC_Iron-Siderophores_ 100.0 3.7E-36 7.9E-41 326.7 19.2 177 1249-1464 1-180 (180)
390 cd03248 ABCC_TAP TAP, the Tran 100.0 9.2E-36 2E-40 335.8 23.2 204 615-819 9-226 (226)
391 PRK14242 phosphate transporter 100.0 6.1E-36 1.3E-40 343.1 22.1 205 616-831 5-238 (253)
392 COG1137 YhbG ABC-type (unclass 100.0 3.2E-37 7E-42 319.0 10.2 216 1246-1474 3-231 (243)
393 cd03224 ABC_TM1139_LivF_branch 100.0 6E-36 1.3E-40 336.4 21.5 197 618-829 1-220 (222)
394 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 8.8E-36 1.9E-40 338.1 22.6 199 618-831 2-222 (236)
395 cd03218 ABC_YhbG The ABC trans 100.0 7E-36 1.5E-40 338.2 21.7 198 618-830 1-222 (232)
396 COG1245 Predicted ATPase, RNas 100.0 2.7E-35 5.9E-40 335.5 26.4 175 1271-1470 363-546 (591)
397 PRK13644 cbiO cobalt transport 100.0 9.7E-36 2.1E-40 344.5 23.2 199 618-830 2-224 (274)
398 TIGR01288 nodI ATP-binding ABC 100.0 7.4E-36 1.6E-40 350.5 22.5 202 616-831 3-225 (303)
399 PRK13635 cbiO cobalt transport 100.0 1.2E-35 2.6E-40 344.5 23.9 202 617-831 5-230 (279)
400 cd03258 ABC_MetN_methionine_tr 100.0 8.4E-36 1.8E-40 337.7 22.1 201 618-830 2-230 (233)
401 cd03235 ABC_Metallic_Cations A 100.0 5.5E-36 1.2E-40 334.5 20.3 188 620-823 2-213 (213)
402 PRK11629 lolD lipoprotein tran 100.0 7.7E-36 1.7E-40 337.9 21.7 196 617-824 5-228 (233)
403 PRK13641 cbiO cobalt transport 100.0 8.5E-36 1.8E-40 347.3 22.6 203 617-830 2-234 (287)
404 PRK14269 phosphate ABC transpo 100.0 7.6E-36 1.7E-40 340.6 21.6 203 617-830 2-230 (246)
405 cd03301 ABC_MalK_N The N-termi 100.0 6.3E-36 1.4E-40 334.0 20.4 192 618-823 1-213 (213)
406 PRK11247 ssuB aliphatic sulfon 100.0 1.1E-35 2.3E-40 340.1 22.6 196 616-826 11-219 (257)
407 PRK14273 phosphate ABC transpo 100.0 1.5E-35 3.3E-40 339.9 23.7 205 616-831 6-239 (254)
408 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.8E-35 3.8E-40 328.9 23.4 189 616-824 5-206 (207)
409 PRK09536 btuD corrinoid ABC tr 100.0 8.1E-36 1.8E-40 358.1 22.1 200 617-831 3-229 (402)
410 PRK13636 cbiO cobalt transport 100.0 1.4E-35 3E-40 344.8 23.1 200 617-830 5-231 (283)
411 PRK13536 nodulation factor exp 100.0 9.8E-36 2.1E-40 352.4 21.8 203 615-831 39-262 (340)
412 COG1123 ATPase components of v 100.0 1.3E-35 2.8E-40 356.3 23.0 227 1247-1482 5-255 (539)
413 COG4555 NatA ABC-type Na+ tran 100.0 5.1E-36 1.1E-40 310.4 16.8 213 1248-1473 2-224 (245)
414 PRK09493 glnQ glutamine ABC tr 100.0 1.5E-35 3.3E-40 337.0 22.4 199 618-831 2-226 (240)
415 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7.6E-36 1.7E-40 344.6 20.2 198 619-831 26-251 (269)
416 PRK03695 vitamin B12-transport 100.0 1.4E-35 3.1E-40 338.4 22.1 206 1248-1471 1-222 (248)
417 cd03266 ABC_NatA_sodium_export 100.0 1.1E-35 2.4E-40 333.2 20.7 194 618-823 2-218 (218)
418 COG1131 CcmA ABC-type multidru 100.0 1.4E-35 3.1E-40 344.3 22.0 201 617-830 4-226 (293)
419 cd03269 ABC_putative_ATPase Th 100.0 1.1E-35 2.4E-40 331.3 20.0 192 618-823 1-210 (210)
420 COG4178 ABC-type uncharacteriz 100.0 4E-32 8.7E-37 330.1 52.5 445 360-815 104-587 (604)
421 cd03264 ABC_drug_resistance_li 100.0 1E-35 2.3E-40 331.8 19.7 190 618-823 1-211 (211)
422 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.5E-35 3.2E-40 337.5 21.2 202 618-830 1-225 (242)
423 PRK11831 putative ABC transpor 100.0 1.6E-35 3.5E-40 342.1 21.7 201 616-831 6-234 (269)
424 PRK10744 pstB phosphate transp 100.0 2.3E-35 5.1E-40 339.3 22.8 205 616-831 12-245 (260)
425 PRK13632 cbiO cobalt transport 100.0 2.5E-35 5.4E-40 340.9 23.1 203 616-830 6-231 (271)
426 COG4175 ProV ABC-type proline/ 100.0 1.2E-35 2.6E-40 326.2 19.2 206 617-833 4-257 (386)
427 PRK09580 sufC cysteine desulfu 100.0 3.9E-35 8.5E-40 335.5 24.4 211 1248-1469 2-233 (248)
428 PRK13649 cbiO cobalt transport 100.0 1.7E-35 3.8E-40 344.1 21.8 203 617-830 2-234 (280)
429 cd03267 ABC_NatA_like Similar 100.0 1.3E-35 2.8E-40 336.4 20.0 191 1262-1464 34-236 (236)
430 TIGR03415 ABC_choXWV_ATP choli 100.0 1.5E-35 3.4E-40 352.9 21.6 188 633-831 37-255 (382)
431 TIGR02211 LolD_lipo_ex lipopro 100.0 2.1E-35 4.5E-40 331.8 21.3 191 618-820 2-220 (221)
432 cd03231 ABC_CcmA_heme_exporter 100.0 2.4E-35 5.1E-40 326.1 21.4 194 1248-1455 1-198 (201)
433 PRK13640 cbiO cobalt transport 100.0 2.7E-35 5.8E-40 342.3 22.8 202 616-830 4-232 (282)
434 PRK13645 cbiO cobalt transport 100.0 2.2E-35 4.8E-40 344.5 22.1 204 616-830 5-240 (289)
435 PRK10619 histidine/lysine/argi 100.0 2.1E-35 4.5E-40 339.3 21.5 201 616-830 4-241 (257)
436 TIGR03411 urea_trans_UrtD urea 100.0 2.4E-35 5.1E-40 336.0 21.7 199 617-830 2-231 (242)
437 PRK11231 fecE iron-dicitrate t 100.0 2.9E-35 6.3E-40 337.7 22.6 199 617-830 2-227 (255)
438 PRK11300 livG leucine/isoleuci 100.0 2.9E-35 6.3E-40 337.9 22.5 199 617-830 5-243 (255)
439 PRK14235 phosphate transporter 100.0 2.8E-35 6E-40 339.8 22.3 205 615-830 17-251 (267)
440 PRK10070 glycine betaine trans 100.0 1.8E-35 3.9E-40 354.9 21.3 187 634-831 42-255 (400)
441 PRK14274 phosphate ABC transpo 100.0 3.2E-35 6.9E-40 338.1 22.6 204 617-831 12-244 (259)
442 PRK15439 autoinducer 2 ABC tra 100.0 4E-35 8.6E-40 368.4 25.3 212 1247-1471 11-229 (510)
443 COG4619 ABC-type uncharacteriz 100.0 8.7E-36 1.9E-40 299.3 15.3 198 1255-1462 9-214 (223)
444 PRK13549 xylose transporter AT 100.0 2.6E-35 5.6E-40 370.2 23.4 211 1247-1470 5-231 (506)
445 PRK11264 putative amino-acid A 100.0 2.4E-35 5.2E-40 337.6 21.1 200 617-831 3-234 (250)
446 TIGR01184 ntrCD nitrate transp 100.0 1.8E-35 3.8E-40 334.0 19.7 190 1265-1470 1-203 (230)
447 PRK13548 hmuV hemin importer A 100.0 5.4E-35 1.2E-39 335.6 24.0 199 617-830 2-230 (258)
448 TIGR03410 urea_trans_UrtE urea 100.0 2.6E-35 5.6E-40 333.1 20.9 197 618-828 1-219 (230)
449 cd03216 ABC_Carb_Monos_I This 100.0 4.2E-35 9.1E-40 312.9 21.0 159 1248-1462 1-162 (163)
450 PRK15079 oligopeptide ABC tran 100.0 3.3E-35 7.2E-40 347.0 22.4 206 616-832 7-253 (331)
451 PRK13633 cobalt transporter AT 100.0 5.5E-35 1.2E-39 339.5 23.8 203 617-831 4-234 (280)
452 PRK10895 lipopolysaccharide AB 100.0 4.4E-35 9.5E-40 333.5 22.5 199 617-830 3-226 (241)
453 PRK00635 excinuclease ABC subu 100.0 3.4E-34 7.4E-39 383.7 34.7 208 1247-1472 600-907 (1809)
454 PRK14245 phosphate ABC transpo 100.0 2.7E-35 5.9E-40 337.0 20.8 204 617-831 3-235 (250)
455 PRK10247 putative ABC transpor 100.0 3E-35 6.6E-40 331.1 20.9 197 616-826 6-223 (225)
456 PRK13642 cbiO cobalt transport 100.0 5E-35 1.1E-39 339.3 23.2 203 617-831 4-230 (277)
457 PRK10575 iron-hydroxamate tran 100.0 4.1E-35 8.9E-40 338.1 22.4 200 616-830 10-237 (265)
458 cd03292 ABC_FtsE_transporter F 100.0 2.5E-35 5.4E-40 329.5 19.9 188 618-819 1-214 (214)
459 PRK13638 cbiO cobalt transport 100.0 3.9E-35 8.6E-40 339.4 22.2 199 618-831 2-226 (271)
460 PRK14259 phosphate ABC transpo 100.0 5.6E-35 1.2E-39 337.5 23.4 205 616-831 12-254 (269)
461 PRK13648 cbiO cobalt transport 100.0 5.1E-35 1.1E-39 338.1 23.1 202 617-831 7-232 (269)
462 PRK10584 putative ABC transpor 100.0 5.2E-35 1.1E-39 330.2 22.5 194 617-822 6-227 (228)
463 PRK14248 phosphate ABC transpo 100.0 4.7E-35 1E-39 338.3 22.7 205 616-831 20-253 (268)
464 PRK11614 livF leucine/isoleuci 100.0 6.2E-35 1.3E-39 331.4 23.1 205 617-830 5-226 (237)
465 TIGR02673 FtsE cell division A 100.0 2.2E-35 4.9E-40 329.9 19.2 188 618-818 2-214 (214)
466 PRK14239 phosphate transporter 100.0 4.3E-35 9.3E-40 335.9 22.0 204 617-831 5-237 (252)
467 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.7E-35 1E-39 326.5 21.7 189 618-823 1-211 (211)
468 PRK10762 D-ribose transporter 100.0 3.8E-35 8.2E-40 368.3 23.5 212 1247-1471 4-230 (501)
469 PRK14268 phosphate ABC transpo 100.0 4E-35 8.6E-40 337.0 21.6 205 616-831 11-243 (258)
470 PRK11124 artP arginine transpo 100.0 5.2E-35 1.1E-39 333.1 22.3 198 617-829 2-229 (242)
471 COG4555 NatA ABC-type Na+ tran 100.0 1.2E-35 2.7E-40 307.6 15.5 200 618-831 2-223 (245)
472 PRK14237 phosphate transporter 100.0 5.8E-35 1.3E-39 337.1 22.8 205 616-831 19-252 (267)
473 TIGR00630 uvra excinuclease AB 100.0 2.3E-34 5E-39 372.4 31.0 216 1247-1469 612-923 (924)
474 PRK09700 D-allose transporter 100.0 3.2E-35 6.9E-40 370.1 22.4 212 1247-1471 5-234 (510)
475 PRK13538 cytochrome c biogenes 100.0 3.7E-35 8E-40 325.4 20.3 194 1248-1455 2-202 (204)
476 PRK13652 cbiO cobalt transport 100.0 7.2E-35 1.6E-39 338.0 23.6 200 617-830 3-227 (277)
477 PRK10253 iron-enterobactin tra 100.0 5.6E-35 1.2E-39 337.0 22.5 201 615-830 5-233 (265)
478 TIGR02769 nickel_nikE nickel i 100.0 5.8E-35 1.2E-39 336.9 22.5 206 617-833 2-243 (265)
479 cd03225 ABC_cobalt_CbiO_domain 100.0 2.8E-35 6E-40 328.4 19.2 188 619-818 1-211 (211)
480 PRK14249 phosphate ABC transpo 100.0 6.6E-35 1.4E-39 334.1 22.8 204 617-831 4-236 (251)
481 TIGR03522 GldA_ABC_ATP gliding 100.0 3.8E-35 8.3E-40 343.9 21.1 200 617-831 2-222 (301)
482 cd03247 ABCC_cytochrome_bd The 100.0 4.7E-35 1E-39 317.4 20.3 166 618-823 1-178 (178)
483 PRK14251 phosphate ABC transpo 100.0 5.5E-35 1.2E-39 334.8 21.9 204 617-831 4-236 (251)
484 PRK10261 glutathione transport 100.0 3.1E-35 6.8E-40 376.5 22.0 220 1247-1474 12-261 (623)
485 TIGR01188 drrA daunorubicin re 100.0 2.9E-35 6.3E-40 345.3 19.8 186 633-830 6-213 (302)
486 PRK14240 phosphate transporter 100.0 7.7E-35 1.7E-39 333.3 22.8 203 617-830 3-234 (250)
487 TIGR03005 ectoine_ehuA ectoine 100.0 5.9E-35 1.3E-39 334.7 21.8 199 618-831 1-237 (252)
488 KOG0066 eIF2-interacting prote 100.0 3.2E-34 6.9E-39 322.0 27.0 191 1247-1462 586-781 (807)
489 PRK13639 cbiO cobalt transport 100.0 5.4E-35 1.2E-39 338.6 21.5 199 618-830 2-226 (275)
490 cd03257 ABC_NikE_OppD_transpor 100.0 7.8E-35 1.7E-39 328.8 22.1 195 618-823 2-228 (228)
491 PRK14270 phosphate ABC transpo 100.0 7.6E-35 1.6E-39 333.5 22.2 204 617-831 4-236 (251)
492 PRK09984 phosphonate/organopho 100.0 9.9E-35 2.1E-39 334.6 23.1 197 617-828 4-240 (262)
493 TIGR03740 galliderm_ABC gallid 100.0 6.8E-35 1.5E-39 328.0 21.2 195 618-827 1-210 (223)
494 TIGR03873 F420-0_ABC_ATP propo 100.0 7.1E-35 1.5E-39 334.7 21.7 198 618-830 2-226 (256)
495 PRK11248 tauB taurine transpor 100.0 8.1E-35 1.8E-39 333.3 21.7 193 618-825 2-215 (255)
496 PRK15134 microcin C ABC transp 100.0 1.2E-34 2.6E-39 366.1 25.4 220 1247-1474 5-249 (529)
497 PRK14247 phosphate ABC transpo 100.0 9.2E-35 2E-39 332.7 22.0 204 617-831 3-235 (250)
498 PRK14243 phosphate transporter 100.0 1.1E-34 2.5E-39 334.1 22.6 205 616-831 9-249 (264)
499 PRK10771 thiQ thiamine transpo 100.0 2.2E-34 4.9E-39 325.7 24.5 197 618-831 2-220 (232)
500 PRK10908 cell division protein 100.0 1.2E-34 2.5E-39 325.9 21.9 189 618-820 2-216 (222)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.3e-277 Score=2638.18 Aligned_cols=1254 Identities=47% Similarity=0.786 Sum_probs=1167.4
Q ss_pred CCCCcccch--hHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHH
Q 000452 222 VTPYSNAGL--FSVLTYTWINSLIALGNKKTLDLEDVPQLDSGNSVVGVFATFKNKLETEAGLGSGLTTLKLIKAMFRSV 299 (1495)
Q Consensus 222 ~~p~~~a~~--~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~al~~~~ 299 (1495)
++|.+.++. +|++||||++|++++|||++|+.+|+|+++++|+++.+.++|++.|+++.+ ++.++|+++++++++|
T Consensus 122 ~~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~--~~~~~psl~~al~~~f 199 (1381)
T KOG0054|consen 122 PNPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELG--RSGKKPSLLRALLRTF 199 (1381)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhc--cccCCcHHHHHHHHHH
Confidence 344555555 999999999999999999999999999999999999999999999999862 2226789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 300 WKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIRLRAALIA 379 (1495)
Q Consensus 300 ~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~rir~~L~~ 379 (1495)
|+++++.+++..+.+.+.+++|.+++.+++|+++++...+.||+++++++++.++++++.+||+|..+++|+|+|++|++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~ 279 (1381)
T KOG0054|consen 200 GRTFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALIS 279 (1381)
T ss_pred HHHHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHH
Confidence 99999999999999999999999999999999988656678999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 380 MIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWYIHDPWLFLFEVALSFLILYKSLGIASVAAFFGTVIFMLVNV 459 (1495)
Q Consensus 380 ~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~~i~~~~~~~ 459 (1495)
+||+|+|++++.++++++.|+|+|+|++|++|+.++++++|.+|..|+|+++++++||.++|+++++|++++++++|+|.
T Consensus 280 ~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~ 359 (1381)
T KOG0054|consen 280 AIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNS 359 (1381)
T ss_pred HHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 460 PLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFVFWCAPTFVS 539 (1495)
Q Consensus 460 ~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~ 539 (1495)
+++++++++|++.|+.+|+|++.|+|+|+|||+|||||||++|.++|++.|++|+++++|..+..+++.++++++|++++
T Consensus 360 ~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~ 439 (1381)
T KOG0054|consen 360 FLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVS 439 (1381)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccE
Q 000452 540 VITFGTCI-LLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEKQPRGSSETAI 618 (1495)
Q Consensus 540 ~~~f~~~~-~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i 618 (1495)
++||++|+ ..|+.+++.++|+++++||+|+.|+.++|..++.+.|++||++|+++||..+|.+++..+..+....+..+
T Consensus 440 ~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i 519 (1381)
T KOG0054|consen 440 VVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENAI 519 (1381)
T ss_pred HHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCceE
Confidence 99999999 77889999999999999999999999999999999999999999999999999988766544445566789
Q ss_pred EEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCeEEEEccCCcccCccHH
Q 000452 619 EIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQSGKIE 698 (1495)
Q Consensus 619 ~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~~ayv~Q~~~l~~~ti~ 698 (1495)
+++|++|+|+.++..++|+||||+|++|+++||||++||||||||++|+||+++.+|+|.++|.+|||||+|||+|||||
T Consensus 520 ~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv~Q~pWI~ngTvr 599 (1381)
T KOG0054|consen 520 EIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYVPQQPWIQNGTVR 599 (1381)
T ss_pred EEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEeccccHhhCCcHH
Confidence 99999999997666679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHH
Q 000452 699 DNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTG 778 (1495)
Q Consensus 699 enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~ 778 (1495)
|||+||.+||++||++|+++|+|++|++.||.||+|+|||||.||||||||||+||||+|+|+||||||||+||||+|++
T Consensus 600 eNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg 679 (1381)
T KOG0054|consen 600 ENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVG 679 (1381)
T ss_pred HhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCCchhHHHHHHHhhhcccccccCCCCC
Q 000452 779 SHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGTDFMELVDAHKQALSTLDSIEGRPLS 858 (1495)
Q Consensus 779 ~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 858 (1495)
+|||++|+++.+++||+|+|||++++++.||+|++|+||+|.+.|+|+|+++.+..+.++... ...+..+. ...+..
T Consensus 680 ~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~--~~~~~~~~-~~~~~~ 756 (1381)
T KOG0054|consen 680 KHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHE--EESEQEEE-ASEKDL 756 (1381)
T ss_pred HHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhc--cchhhccc-cccccc
Confidence 999999999999999999999999999999999999999999999999999988888887322 21111110 000000
Q ss_pred CCCCCCCCCCCCCcccccccccccccccccccccccchhhhhhHHHHHhhcCchHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 000452 859 EKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQLVQEEEREKGKVEFSVYWKYITAAYGGVLVPFILLAQTL 938 (1495)
Q Consensus 859 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~ 938 (1495)
+..+.... ... ......+...++....+....+..++|+++.|.|+|++|+.|+++++|+...++++++.++
T Consensus 757 ~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~ 828 (1381)
T KOG0054|consen 757 ESGESSRE-------SES-RSLESLSSEEEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVL 828 (1381)
T ss_pred cccccccc-------hhh-hhhhhhcccccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 00000000 000 0000000000011112223567788899999999999999999998888878888888999
Q ss_pred HHHHHHhhHHHHHhhcccCCCCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccc
Q 000452 939 FQILQIASNYWIAWATPASKDIKPR-VTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSF 1017 (1495)
Q Consensus 939 ~~~~~~~~~~wl~~~~~~~~~~~~~-~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~f 1017 (1495)
.+++.++++||+++|++........ .+..+|+++|.+++++++++.++|++++..+++++|+.+|++|+++++|+||+|
T Consensus 829 ~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~F 908 (1381)
T KOG0054|consen 829 TQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSF 908 (1381)
T ss_pred HHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh
Confidence 9999999999999998654322211 467789999999999999999999999999999999999999999999999999
Q ss_pred ccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1018 FDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRL 1097 (1495)
Q Consensus 1018 fd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl 1097 (1495)
||+||+|||+||||+|++.+|..+|..+..++.++++++++++++++++|+++++++|+.++|+++++||++++||++|+
T Consensus 909 FdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRL 988 (1381)
T KOG0054|consen 909 FDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRL 988 (1381)
T ss_pred cCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000452 1098 VGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPK 1177 (1495)
Q Consensus 1098 ~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~ 1177 (1495)
++.+|||+++||+||++|+.|||||++|++|.+++.+++|.+++++|+..+++||+++|+|+++++++++++++.+..+.
T Consensus 989 esitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~ 1068 (1381)
T KOG0054|consen 989 ESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPS 1068 (1381)
T ss_pred hhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998887776
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEe
Q 000452 1178 GFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRY 1257 (1495)
Q Consensus 1178 ~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y 1257 (1495)
+..+||.+|++++|++++++.++|++++.+++|++|+|||||.||+++|+|+|+..+..+||++||++|+|+|+|+++||
T Consensus 1069 ~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RY 1148 (1381)
T KOG0054|consen 1069 GLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRY 1148 (1381)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEe
Confidence 65889999999999999999999999999999999999999999999999988877777799999999999999999999
Q ss_pred CCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCC
Q 000452 1258 APHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEG 1337 (1495)
Q Consensus 1258 ~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~G 1337 (1495)
+|+.|+|||||||+|+||||||||||||||||||+++|||+.||.+|+|.|||+||+++++||||++++||||||+||+|
T Consensus 1149 rp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsG 1228 (1381)
T KOG0054|consen 1149 RPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSG 1228 (1381)
T ss_pred CCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCH
Q 000452 1338 TVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDT 1417 (1495)
Q Consensus 1338 TIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~ 1417 (1495)
|||+||||+++|+|+|||+|||+|+|+++|+++|+|||++|.|+|+|||+||||++||||||||++|||||||||||||+
T Consensus 1229 TvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~ 1308 (1381)
T KOG0054|consen 1229 TVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDP 1308 (1381)
T ss_pred ccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHhhcc
Q 000452 1418 ATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYTQRS 1488 (1495)
Q Consensus 1418 ~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~~~~ 1488 (1495)
+||+.||++||++|+|||||+||||++||+|||||+|||+|+|+|+|+|++|+++++|.|++++.++..++
T Consensus 1309 ~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~~~~ 1379 (1381)
T KOG0054|consen 1309 ETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAALSS 1379 (1381)
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999988764
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.8e-214 Score=2176.20 Aligned_cols=1438 Identities=32% Similarity=0.531 Sum_probs=1190.7
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000452 7 FLLKQAFLRGASGSLHLFLLLGLFGLWVWKKLKVGEGDHSGGSKERFKNKKALWYKLTLVCCFVVSLSSLVLCLLSYFYW 86 (1495)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1495)
|.||+++.+..++..++++++.....+..++..+. ...............+.++++....+++...+... ...
T Consensus 29 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 101 (1622)
T PLN03130 29 YTPCATDSLVINISHLVLLGLCLYRIWLIKKDHKV------QRFCLRSKWYNYFLALLAAYCTAEPLFRLVMGISV-LNL 101 (1622)
T ss_pred CCccHHhhHHHHHHHHHHHHHHHHHHHHhcccccc------CCccccchHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcc
Confidence 78999998888877777544444333333221111 00001011122234445555555555443333332 222
Q ss_pred cCC-CcccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHH---HHHHHHHhhhhh-hhhccccccc
Q 000452 87 YGN-GRSYDQLVILFDFGVRTLGWGAICVYLRTVFLNLRQPKLPMLLKIWWGFY---VFISCYCLIVDI-VLYQKQVNLP 161 (1495)
Q Consensus 87 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~ 161 (1495)
.+. .+.......+...++..+++++.......++.++. .+++.+++||++. .++.++ ... ..+... ...
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~ 175 (1622)
T PLN03130 102 DGQTSLPPFEIVSLIVEALTWCSMLVMIGVETKIYIREF--RWYVRFAVIYVLVGDAVMLNLV---LSVKEYYSSF-VLY 175 (1622)
T ss_pred ccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcC--CCcceeehhHHHhhHHHHHHHH---HHHHHHHhcc-ccc
Confidence 221 12222333244445555555555553324443333 5789999999887 555555 222 222221 011
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhcccccCccccccccCCCcCCCCCCcCccccccCCCCCCCCCCcccchhHHHHHHhHHH
Q 000452 162 IQYLVSDVVSVITGLFPCFVGFMSKIEGEDTLILQEPLLKVDSGESEGTVASIKSRGADTVTPYSNAGLFSVLTYTWINS 241 (1495)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~s~~~f~W~~p 241 (1495)
.......+++..+++++ +.+...++. +...|... +.. .+.+.++.+...+++||++||+|||++|+|++|
T Consensus 176 -~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~-~~~---~~~~~~~~~~~~~~~pe~~a~~~s~~~F~W~~p 245 (1622)
T PLN03130 176 -LYISEVAAQVLFGILLL-VYFPNLDPY----PGYTPIGS-ESV---DDYEYEELPGGEQICPERHANIFSRIFFGWMTP 245 (1622)
T ss_pred -eehhHHHHHHHHHHHHH-HHHhcCCCC----cccccccc-ccc---ccccccCCcccCCCCcccccCHHHHHHHHHHHH
Confidence 12223333433333331 111111110 01111110 000 000111223346779999999999999999999
Q ss_pred HHHccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 242 LIALGNKKTLDLEDVPQLDSGNSVVGVFATFKNKLETEAGLGSGLTTLKLIKAMFRSVWKDVLLTALVAIVCTLATYVGP 321 (1495)
Q Consensus 242 l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P 321 (1495)
++++||+++|+.+|||+|+++|+++.++++|++.|+++. ++++++++++++++||+.+++.++++++..++.+++|
T Consensus 246 l~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~P 321 (1622)
T PLN03130 246 LMQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEEL----KKPKPWLLRALNNSLGGRFWLGGFFKIGNDLSQFVGP 321 (1622)
T ss_pred HHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHh----ccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999765 2345789999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHH
Q 000452 322 YLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIRLRAALIAMIYNKGLKLSSQAKQGNTSGEI 401 (1495)
Q Consensus 322 ~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i 401 (1495)
++++.+++++.+++ ....++.++++++++.++.+++.++|.+...++++++|+.++..+|+|+++++...+++.++|++
T Consensus 322 ~ll~~li~~v~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~i 400 (1622)
T PLN03130 322 LLLNLLLESMQNGE-PAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKI 400 (1622)
T ss_pred HHHHHHHHHHhcCC-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHH
Confidence 99999999997543 23457777777777777777888888888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 402 INFMTVDAERVAELSWYIHDPWLFLFEVALSFLILYKSLGIASVAAFFGTVIFMLVNVPLSTVQEKFQNELMKSKDERMK 481 (1495)
Q Consensus 402 ~nl~s~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~ 481 (1495)
+|+|++|++++.+++..+|.+|..|+++++++++||..+|+++++|++++++++|++.++.++.++.+++.|+.+|+|.+
T Consensus 401 vnl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~ 480 (1622)
T PLN03130 401 TNLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIG 480 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Q 000452 482 ATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFVFWCAPTFVSVITFGTCILLKVPLESGKVLSA 561 (1495)
Q Consensus 482 ~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~ 561 (1495)
.++|+++|||+||+|+||+.|.+++++.|++|+++.++..+..++..++....|.++++++|++|.+.++++|++.+|++
T Consensus 481 ~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~vf~~ 560 (1622)
T PLN03130 481 LMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARAFTS 560 (1622)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999888888887888888899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccEEEEeeEEEecCCCCCCccccceE
Q 000452 562 IATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEKQPRGSSETAIEIADGNFSWDISSHNPTLKDINL 641 (1495)
Q Consensus 562 lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l 641 (1495)
+++++.+..|+..+|..+..+.++++|++||++|+..+|....... +.......|+++|++|+|+..+++++|+|+||
T Consensus 561 l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~~--~~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl 638 (1622)
T PLN03130 561 LSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPNP--PLEPGLPAISIKNGYFSWDSKAERPTLSNINL 638 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccCC--cccCCCCceEEEeeEEEccCCCCCceeeceeE
Confidence 9999999999999999999999999999999999987765321111 11111246999999999975445689999999
Q ss_pred EeeCCcEEEEEecCCccHHHHHHHHhCCCCCCC-cEEEEcCeEEEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhC
Q 000452 642 KVFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS-GTLKLCGTKAYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACS 720 (1495)
Q Consensus 642 ~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~-G~v~~~g~~ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~ 720 (1495)
++++|++++|+||+|||||||+++|+|+++|.+ |+|.+.|+++||+|+||++++||||||+||.++|+++|++++++|+
T Consensus 639 ~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~ 718 (1622)
T PLN03130 639 DVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTA 718 (1622)
T ss_pred EecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhC
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred cHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEec
Q 000452 721 LEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTH 800 (1495)
Q Consensus 721 l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH 800 (1495)
|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++|+.+.+++||+|+|||
T Consensus 719 L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH 798 (1622)
T PLN03130 719 LQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTN 798 (1622)
T ss_pred cHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred CCCccccCCEEEEEeCCEEEEecChHHHHhcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCccccccccc
Q 000452 801 QVEFLPAADLVLVIKDGKITQAGKYTDVINSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEV 880 (1495)
Q Consensus 801 ~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (1495)
+++.++.||+|++|++|+|++.|+++|+.+.+..|.++...+....+.. . .....+.................
T Consensus 799 ~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~---- 871 (1622)
T PLN03130 799 QLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYV-E--ENGEEEDDQTSSKPVANGNANNL---- 871 (1622)
T ss_pred CHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhcccccccc-c--ccccccccccccccccccccccc----
Confidence 9999999999999999999999999999988777777765432110000 0 00000000000000000000000
Q ss_pred ccccccccccccccchhhhhhHHHHHhhcCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCC
Q 000452 881 ENKEVQNDREDKVAEPQRQLVQEEEREKGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDI 960 (1495)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~ 960 (1495)
.+... ...........+.++|+++.|.+++++|+.|+++.++.+++.+++++.++.+++.+++++|+++|++....
T Consensus 872 --~~~~~-~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~- 947 (1622)
T PLN03130 872 --KKDSS-SKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTP- 947 (1622)
T ss_pred --ccccc-ccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-
Confidence 00000 00000111223556788899999999999999997766666666666778888999999999998853211
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhh
Q 000452 961 KPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLS 1040 (1495)
Q Consensus 961 ~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~ 1040 (1495)
.......|+++|++++++..++.+++.++....+.++++++|++++++++++|++|||++|+|+|+|||++|++.+|..
T Consensus 948 -~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~ 1026 (1622)
T PLN03130 948 -KTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRN 1026 (1622)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHH
Confidence 1223456788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHH
Q 000452 1041 IPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIR 1120 (1495)
Q Consensus 1041 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIR 1120 (1495)
+|..+..++..++.+++.++++++++|..+++++|+++++++++++|.+++|+++|++..+++|+++|++|+++|+.|||
T Consensus 1027 l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIr 1106 (1622)
T PLN03130 1027 VAVFVNMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIR 1106 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHH
Confidence 99999999999999999999999999888888888888888899999999999999999999999999999999999999
Q ss_pred hhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----CCHHHHHHHHHHHHHH
Q 000452 1121 SFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGF-----IDPAIAGLAVTYGLTL 1195 (1495)
Q Consensus 1121 af~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~gl~l~~~~~l 1195 (1495)
+|+++++|.+++.+..|.+.+..+.....++|++.++++++.+++.+.+.+.+.. .+. ..++.+|++++|++.+
T Consensus 1107 af~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~-~~~~~~~~~~~~~~G~~ls~~~~~ 1185 (1622)
T PLN03130 1107 AYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQ-NGRAENQAAFASTMGLLLSYALNI 1185 (1622)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccccccchhhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999887666555443332 221 1268899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCC
Q 000452 1196 NNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGE 1275 (1495)
Q Consensus 1196 ~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~G 1275 (1495)
...+.++.+.+..+|+.++|+||+.+|++.|+|++...++..+++.||.+|.|+|+||+|+|+++.++||+||||+|+||
T Consensus 1186 ~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~G 1265 (1622)
T PLN03130 1186 TSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPS 1265 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCC
Confidence 99999999999999999999999999999998876544445567789999999999999999988888999999999999
Q ss_pred cEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCCCCCCHHHHH
Q 000452 1276 KKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIW 1355 (1495)
Q Consensus 1276 ekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~~~sd~ei~ 1355 (1495)
||||||||||||||||+++|+|+++|++|+|.|||+||+++++++||++|++|||||+||+||||+||||+++++|+|+|
T Consensus 1266 ekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~ 1345 (1622)
T PLN03130 1266 EKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLW 1345 (1622)
T ss_pred CEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcE
Q 000452 1356 EALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCT 1435 (1495)
Q Consensus 1356 ~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~T 1435 (1495)
+||++|+++++|.++|+||||+|+|+|.||||||||||||||||||+|+|||||||||+||.+||+.||++|++.+++||
T Consensus 1346 ~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~T 1425 (1622)
T PLN03130 1346 ESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCT 1425 (1622)
T ss_pred HHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHhhc
Q 000452 1436 VITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYTQR 1487 (1495)
Q Consensus 1436 VI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~~~ 1487 (1495)
||+||||++|+++||||+|||+|+|+|+|+|++|+++++|.|++|+++.+..
T Consensus 1426 vI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~~ 1477 (1622)
T PLN03130 1426 MLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGAA 1477 (1622)
T ss_pred EEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcChh
Confidence 9999999999999999999999999999999999988789999999987753
No 3
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=6.3e-210 Score=2134.84 Aligned_cols=1433 Identities=30% Similarity=0.508 Sum_probs=1184.7
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHh-hccCCCCCCCCCCcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000452 7 FLLKQAFLRGASGSLHLFLLLGLFGLWVWK-KLKVGEGDHSGGSKERFKNKKALWYKLTLVCCFVVSLSSLVLCLLSYFY 85 (1495)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (1495)
|.||+++.+..++..++++++.....+... +.+.+ + .. ...........+.++++....+++...+... ..
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 100 (1495)
T PLN03232 29 YTPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAKAQ-I----YV--LRKKYYNCVLGILACYCVVEPVLRLVMGISL-FD 100 (1495)
T ss_pred CCccHHhhHHHHHHHHHHHHHHHHHHHHHhhccccC-C----cc--ccchHHHHHHHHHHHHHHHHHHHHHHHHhhh-hc
Confidence 789999988877777774444433333221 11111 0 11 1011112233444455554444443333222 22
Q ss_pred hcCC-CcccchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHH---HHHHHHHhhhhh-hhhcccccc
Q 000452 86 WYGN-GRSYDQLVILFDFGVRTLGWGAICVYLRTVFLNLRQPKLPMLLKIWWGFY---VFISCYCLIVDI-VLYQKQVNL 160 (1495)
Q Consensus 86 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~ 160 (1495)
+.+. .+.......+...++..++++++......++.++. .+++.+++||++. .++.+. ... ...... ..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~ 174 (1495)
T PLN03232 101 MDEETDLPPFEVASLMVEAFAWFSMLVLIGLETKQYVKEF--RWYVRFGVVYVLVADAVLLDLV---LPLKNSINRT-AL 174 (1495)
T ss_pred cccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcC--CCCceeeehhHhhhhHHHHHHH---HHHHHHHhcc-cc
Confidence 2221 12122223244456666666655553334443333 4789999999887 555555 222 222221 01
Q ss_pred chhhhHHHHHHHHHHHHH-HHHhhcccccCccccccccCCCcCCCCCCcCccccccCCCCCCCCCCcccchhHHHHHHhH
Q 000452 161 PIQYLVSDVVSVITGLFP-CFVGFMSKIEGEDTLILQEPLLKVDSGESEGTVASIKSRGADTVTPYSNAGLFSVLTYTWI 239 (1495)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~s~~~f~W~ 239 (1495)
. ......++.+..+++. ++.-+..+. + ...+... +. ..|.+.+..|.....+||++||+|||+||+|+
T Consensus 175 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~-~~---~~~~~~~~~~~~~~~~pe~~a~~~s~~~f~w~ 243 (1495)
T PLN03232 175 Y-LCISSRCCQALFGILLLVYIPELDPY--P----GYHILNN-ES---LDNVEYDALRGGENICPERYASIFSRIYFSWM 243 (1495)
T ss_pred c-eehhHHHHHHHHHHHHHHhcccCCCC--C----ccccccc-cc---ccccccccccccCCCCccccCCHHHHHHHHHH
Confidence 1 1122222333333222 111111110 0 0100000 00 00011223344567899999999999999999
Q ss_pred HHHHHccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 240 NSLIALGNKKTLDLEDVPQLDSGNSVVGVFATFKNKLETEAGLGSGLTTLKLIKAMFRSVWKDVLLTALVAIVCTLATYV 319 (1495)
Q Consensus 240 ~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~ 319 (1495)
+|++++||+++|+.+|||+|+++|+++.++++|++.|+++. +.++++++++++++||+.++..++++++.+++.++
T Consensus 244 ~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~----~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~ 319 (1495)
T PLN03232 244 TPLMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEES----RRPKPWLLRALNNSLGGRFWLGGIFKIGHDLSQFV 319 (1495)
T ss_pred HHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhh----ccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999765 22457999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhcCCCHH
Q 000452 320 GPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIRLRAALIAMIYNKGLKLSSQAKQGNTSG 399 (1495)
Q Consensus 320 ~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~rir~~L~~~iy~K~L~ls~~~~~~~~~G 399 (1495)
+|++++.+++++++++. ...++.++++++++.++.+++.++|.+...+++.++|+.++..+|+|.++++...++++++|
T Consensus 320 ~P~ll~~li~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G 398 (1495)
T PLN03232 320 GPVILSHLLQSMQEGDP-AWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFASG 398 (1495)
T ss_pred HHHHHHHHHHHHhcCCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHH
Confidence 99999999999976442 34578888888888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 400 EIINFMTVDAERVAELSWYIHDPWLFLFEVALSFLILYKSLGIASVAAFFGTVIFMLVNVPLSTVQEKFQNELMKSKDER 479 (1495)
Q Consensus 400 ~i~nl~s~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R 479 (1495)
+++|+|++|++++.+++..+|.+|..|++++++++++|..+|++++++++++++++|++.++++..++.+++.++.+|+|
T Consensus 399 ~i~n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r 478 (1495)
T PLN03232 399 KVTNMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKR 478 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999989999999999999999999999999999
Q ss_pred HHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHH
Q 000452 480 MKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFVFWCAPTFVSVITFGTCILLKVPLESGKVL 559 (1495)
Q Consensus 480 ~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vf 559 (1495)
.+.++|+++|||+||+|+||+.+.+++++.|++|++..++..+..+...++....|.++++++|++|.+.++++|++.+|
T Consensus 479 ~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf 558 (1495)
T PLN03232 479 VGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARAF 558 (1495)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999888887777777788888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccEEEEeeEEEecCCCCCCccccc
Q 000452 560 SAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEKQPRGSSETAIEIADGNFSWDISSHNPTLKDI 639 (1495)
Q Consensus 560 t~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i 639 (1495)
+++++++.+..|+..+|..+..+.++++|++||++|++.+|...+... +.......|+++|++|+|+...++++|+|+
T Consensus 559 ~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~~--~~~~~~~~I~~~~vsF~y~~~~~~~vL~~i 636 (1495)
T PLN03232 559 TSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQNP--PLQPGAPAISIKNGYFSWDSKTSKPTLSDI 636 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccC--CcCCCCCcEEEEeeEEEcCCCCCCceeeee
Confidence 999999999999999999999999999999999999987653221111 111122469999999999754456899999
Q ss_pred eEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcE-EEEcCeEEEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHH
Q 000452 640 NLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGT-LKLCGTKAYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDA 718 (1495)
Q Consensus 640 ~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~-v~~~g~~ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~ 718 (1495)
||++++||+++|+||+|||||||+++|+|+++|++|. +.+.+.+|||+|+||+|++||||||+||.++++++|++++++
T Consensus 637 nl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~ 716 (1495)
T PLN03232 637 NLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDV 716 (1495)
T ss_pred EEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHH
Confidence 9999999999999999999999999999999999974 577899999999999999999999999999999999999999
Q ss_pred hCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEE
Q 000452 719 CSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYV 798 (1495)
Q Consensus 719 ~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlv 798 (1495)
|+|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++++++|+.+.+++||+|+|
T Consensus 717 ~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~Ilv 796 (1495)
T PLN03232 717 TALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLV 796 (1495)
T ss_pred hCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888889999999
Q ss_pred ecCCCccccCCEEEEEeCCEEEEecChHHHHhcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCccccccc
Q 000452 799 THQVEFLPAADLVLVIKDGKITQAGKYTDVINSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVK 878 (1495)
Q Consensus 799 TH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (1495)
||+++.++.||+|++|++|+|++.|+++|+.+.+..+.++...+....... +..+ ..+....... .....
T Consensus 797 TH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~---~~~~-~~~~~~~~~~-----~~~~~- 866 (1495)
T PLN03232 797 TNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQ---EVNT-NDENILKLGP-----TVTID- 866 (1495)
T ss_pred ECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhcccccccc---cccc-cccccccccc-----ccccc-
Confidence 999999999999999999999999999999988777777765432210000 0000 0000000000 00000
Q ss_pred ccccccccccccccccchhhhhhHHHHHhhcCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCC
Q 000452 879 EVENKEVQNDREDKVAEPQRQLVQEEEREKGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASK 958 (1495)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~ 958 (1495)
.. .+.. ....+.+.....+.++|++++|.+++++|++|+++.++.+++.+++++.++.++..+++++|+++|++...
T Consensus 867 ~~--~~~~-~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~ 943 (1495)
T PLN03232 867 VS--ERNL-GSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQST 943 (1495)
T ss_pred cc--cccc-ccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 00 0000 00000011122356778899999999999999999776666666666677788889999999998885321
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHH
Q 000452 959 DIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVD 1038 (1495)
Q Consensus 959 ~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd 1038 (1495)
. .......|+++|++++++..++.+++.+++...+.++++++|++++++++++|++|||++|+|+++||+++|++.+|
T Consensus 944 ~--~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id 1021 (1495)
T PLN03232 944 P--KSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDID 1021 (1495)
T ss_pred C--CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHH
Confidence 1 12234678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHH
Q 000452 1039 LSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTT 1118 (1495)
Q Consensus 1039 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~t 1118 (1495)
..++..+..++..++.+++.+++++++++..+++++|+.++++.++.+|.+++|+++|.+..+++|+++|++|+++|+.|
T Consensus 1022 ~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~t 1101 (1495)
T PLN03232 1022 RNVANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSS 1101 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHH
Confidence 99999999999999999999988888888777778888888888899999999999999999999999999999999999
Q ss_pred HHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----CHHHHHHHHHHHH
Q 000452 1119 IRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFI-----DPAIAGLAVTYGL 1193 (1495)
Q Consensus 1119 IRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~gl~l~~~~ 1193 (1495)
||+|+++++|.+++.+..|.+.+..+.....++|+..++++++.+++.+.+.+.+.. .+.+ .++.+|++++|+.
T Consensus 1102 Iraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~g~~~~~~~ 1180 (1495)
T PLN03232 1102 IRAYKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLR-NGNAENQAGFASTMGLLLSYTL 1180 (1495)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cccccccccchHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999988876555544443322 2222 2567889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEee
Q 000452 1194 TLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFP 1273 (1495)
Q Consensus 1194 ~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~ 1273 (1495)
.+...+.++++.+.++|+.++|+||+.+|.+.|+|++...+...+++.||..|.|+|+||+|+|+++.++||+|+||+|+
T Consensus 1181 ~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~ 1260 (1495)
T PLN03232 1181 NITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVS 1260 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEc
Confidence 99999999999999999999999999999999888654333344667899999999999999999887889999999999
Q ss_pred CCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCCCCCCHHH
Q 000452 1274 GEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQ 1353 (1495)
Q Consensus 1274 ~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~~~sd~e 1353 (1495)
||||||||||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+|
T Consensus 1261 ~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdee 1340 (1495)
T PLN03232 1261 PSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDAD 1340 (1495)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCC
Q 000452 1354 IWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSD 1433 (1495)
Q Consensus 1354 i~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~ 1433 (1495)
+|+||++|+++++|+++|+||||+|+|+|.|||||||||+||||||||+|+|||||||||+||++||+.||++|++.+++
T Consensus 1341 i~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~ 1420 (1495)
T PLN03232 1341 LWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKS 1420 (1495)
T ss_pred HHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHhhc
Q 000452 1434 CTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYTQR 1487 (1495)
Q Consensus 1434 ~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~~~ 1487 (1495)
||||+||||++|+++||||+|||+|+|+|+|+|+||+++++|.|++|+++.+..
T Consensus 1421 ~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1421 CTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPA 1474 (1495)
T ss_pred CEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChh
Confidence 999999999999999999999999999999999999998778999999987753
No 4
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=7.1e-208 Score=2117.20 Aligned_cols=1358 Identities=33% Similarity=0.572 Sum_probs=1150.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHhhhhhhhhcccc-ccchhhhHHHHHHHHHHHH
Q 000452 99 LFDFGVRTLGWGAICVYLRTVFLNLRQPKLPMLLKIWWGFYVFISCYCLIVDIVLYQKQV-NLPIQYLVSDVVSVITGLF 177 (1495)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 177 (1495)
...+++..++|+++.+....++.++.+ .+..+.+||++..++.+..+++.......+. ...........+.+.+.++
T Consensus 101 ~~~~~~~~~~~~~~~~l~~~e~~~~~~--~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (1522)
T TIGR00957 101 LVSPTLLGITMLLATFLIQLERRKGVQ--SSGIMLTFWLVALVCALAILRSKILLALKEDAIVDPFRDTTFYIYFALVLS 178 (1522)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHhcccC--CCcchhHHHHHHHHHHHHHHHHHHHHhhcccccccceehhhHHHHHHHHHH
Confidence 334456666776555544455544443 4678999998888776666654431100000 0000001111111111111
Q ss_pred HHHHhhcccccCccccccccCCCcCCCCCCcCccccccCCCCCCCCCCcccchhHHHHHHhHHHHHHccccCCCCCCCCC
Q 000452 178 PCFVGFMSKIEGEDTLILQEPLLKVDSGESEGTVASIKSRGADTVTPYSNAGLFSVLTYTWINSLIALGNKKTLDLEDVP 257 (1495)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~s~~~f~W~~pl~~~g~~~~L~~~Dl~ 257 (1495)
+++.. .. . + ..|++.++. .....+||++||++||++|||+||++++||+++|+.+|||
T Consensus 179 ~~~~~--~~--~----~-~~~~~~~~~-------------~~~~~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~ 236 (1522)
T TIGR00957 179 QLVLS--CF--S----D-KSPLFSETN-------------HDPNPCPESSASFLSRITFWWITGMAVYGYRQPLEESDLW 236 (1522)
T ss_pred HHHHH--hh--c----C-CCCcccccc-------------ccCCCCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhcc
Confidence 11111 00 0 0 123332101 1124589999999999999999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHHHHHhhhccC-------------------------------------CCCChhHHHHHHHHHHH
Q 000452 258 QLDSGNSVVGVFATFKNKLETEAGLG-------------------------------------SGLTTLKLIKAMFRSVW 300 (1495)
Q Consensus 258 ~l~~~~~~~~~~~~f~~~~~~~~~~~-------------------------------------~~~~~~~l~~al~~~~~ 300 (1495)
+++++++++.++++|++.|+++..+. ++.++++|+++++++||
T Consensus 237 ~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~ 316 (1522)
T TIGR00957 237 SLNKEDTSEMVVPVLVENWKKECKKTRKQPVSAVYGKKDPSKPKGSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFG 316 (1522)
T ss_pred CCCHhHhHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccCCccHHHHHHHHHh
Confidence 99999999999999999998752100 11234789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 301 KDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIRLRAALIAM 380 (1495)
Q Consensus 301 ~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~rir~~L~~~ 380 (1495)
+.++..++++++..++.+++|++++.+++++.++......||.++++++++.++.+++.++|.|...++++++|++|+..
T Consensus 317 ~~~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~ 396 (1522)
T TIGR00957 317 PYFLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGA 396 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999997654334568999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 381 IYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWYIHDPWLFLFEVALSFLILYKSLGIASVAAFFGTVIFMLVNVP 460 (1495)
Q Consensus 381 iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~~i~~~~~~~~ 460 (1495)
||+|+|+++...++++++|+++|+|++|++++.++..++|.+|..|++++++++++|..+|+++++|++++++++|++..
T Consensus 397 iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~ 476 (1522)
T TIGR00957 397 VYRKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAV 476 (1522)
T ss_pred HHHHHHhCChhhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 461 LSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFVFWCAPTFVSV 540 (1495)
Q Consensus 461 ~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~ 540 (1495)
+++..+++++++|+.+|+|++.++|+++|||.||+|+||+.|.+++++.|++|++..++..+......+.++..|.++.+
T Consensus 477 ~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (1522)
T TIGR00957 477 MAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVAL 556 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888877777789999999
Q ss_pred HHHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCC-CCCccc
Q 000452 541 ITFGTCILL--KVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEKQPR-GSSETA 617 (1495)
Q Consensus 541 ~~f~~~~~~--~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~-~~~~~~ 617 (1495)
++|++|.+. ++.|+++.+|++++++++++.|+..+|..+..+.++++|++||++||+.+|.++........ ......
T Consensus 557 ~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~ 636 (1522)
T TIGR00957 557 ITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRTIKPGEGNS 636 (1522)
T ss_pred HHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccccccCCCCCCc
Confidence 999998876 46799999999999999999999999999999999999999999999877654322111111 111236
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCeEEEEccCCcccCccH
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQSGKI 697 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~~ayv~Q~~~l~~~ti 697 (1495)
++++|++|+|+. +++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+++||||+||++++||
T Consensus 637 i~~~~~~~~~~~-~~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~i~yv~Q~~~l~~~Ti 715 (1522)
T TIGR00957 637 ITVHNATFTWAR-DLPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKGSVAYVPQQAWIQNDSL 715 (1522)
T ss_pred EEEEEeEEEcCC-CCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECCEEEEEcCCccccCCcH
Confidence 999999999963 2357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHH
Q 000452 698 EDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHT 777 (1495)
Q Consensus 698 ~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~ 777 (1495)
+|||.||.++++++|++++++|++.+|++.+|+||+|.+|++|.+|||||||||+||||+|++||||||||||||||+++
T Consensus 716 ~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~ 795 (1522)
T TIGR00957 716 RENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHV 795 (1522)
T ss_pred HHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH--HHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCCchhHHHHHHHhhhcccccccC-
Q 000452 778 GSHLFKEVLL--GLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGTDFMELVDAHKQALSTLDSIEG- 854 (1495)
Q Consensus 778 ~~~i~~~~~~--~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~- 854 (1495)
++++++.++. +.++++|+|+|||+++.++.||+|++|++|++++.|+++++.++...+.++...+..........+.
T Consensus 796 ~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~ 875 (1522)
T TIGR00957 796 GKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLEDSW 875 (1522)
T ss_pred HHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcchhHHHHHHhhccccccccccccc
Confidence 9999998873 4567899999999999999999999999999999999999998777777766533221100000000
Q ss_pred CCC--CCCCCC-C-CC------CCCCCccccc---ccccccc--c--cccc-ccccccchhhhhhHHHHHhhcCchHHHH
Q 000452 855 RPL--SEKGSA-N-GE------NDGTSATDGV---VKEVENK--E--VQND-REDKVAEPQRQLVQEEEREKGKVEFSVY 916 (1495)
Q Consensus 855 ~~~--~~~~~~-~-~~------~~~~~~~~~~---~~~~~~~--~--~~~~-~~~~~~~~~~~~~~~e~~~~g~v~~~~y 916 (1495)
.+. .+..+. . .+ .......... ....... . .... +..+..+...+..++|+++.|.+++++|
T Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 955 (1522)
T TIGR00957 876 TALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVY 955 (1522)
T ss_pred cccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhHHHHHHhcCcccHHHH
Confidence 000 000000 0 00 0000000000 0000000 0 0000 0000011123456778888999999999
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 917 WKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGY 996 (1495)
Q Consensus 917 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~ 996 (1495)
+.|+++.+. ..+++++++.++.+++.+++++|+++|++......+......|+++|++++++..++.+++.++....+.
T Consensus 956 ~~Y~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~ 1034 (1522)
T TIGR00957 956 WDYMKAIGL-FITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGI 1034 (1522)
T ss_pred HHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998754 4444455556777888899999999988532111122234567789999999999999999888899999
Q ss_pred HHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 997 KTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPV 1076 (1495)
Q Consensus 997 ~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~ 1076 (1495)
++++++|++++++++++|++|||++|+|+|+|||++|++.+|..+|..+..++..++.+++.++++++.+|+++++++|+
T Consensus 1035 ~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~ 1114 (1522)
T TIGR00957 1035 QASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPL 1114 (1522)
T ss_pred HHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888888898
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 000452 1077 IATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFR 1156 (1495)
Q Consensus 1077 ~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~r 1156 (1495)
++++++++++|.+++|+++|++..+++|+++|+.|+++|+.|||+|++|++|.+++.+..|.++++.+.....++|+..+
T Consensus 1115 ~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1194 (1522)
T TIGR00957 1115 GLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVR 1194 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccC
Q 000452 1157 LDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEES 1236 (1495)
Q Consensus 1157 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~ 1236 (1495)
+++++.+++.++..+.+ ...+.+++|.+|++++|++.+...+.++++.+.++|+.++|+||+.+|.+.|+|++...+..
T Consensus 1195 ~~~~~~~~~~~~~~~~v-~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~ 1273 (1522)
T TIGR00957 1195 LECVGNCIVLFAALFAV-ISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQET 1273 (1522)
T ss_pred HHHHHHHHHHHHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCC
Confidence 99998765555444433 23567899999999999999999999999999999999999999999999888765433444
Q ss_pred CCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCC
Q 000452 1237 RPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI 1316 (1495)
Q Consensus 1237 ~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i 1316 (1495)
.+++.||.+|.|+|+||+|+|+++.++||+||||+|+||||||||||||||||||+++|+|+++|++|+|.|||+||+++
T Consensus 1274 ~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i 1353 (1522)
T TIGR00957 1274 APPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKI 1353 (1522)
T ss_pred CCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEcccc
Confidence 56678999999999999999998877899999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHhcccEEEcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1317 GLHDLRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1317 ~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
++++||++|++|||||+||+||||+||||+++++|+|||+||++|+++++|.++|+||||+|+|+|.|||||||||+|||
T Consensus 1354 ~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LA 1433 (1522)
T TIGR00957 1354 GLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLA 1433 (1522)
T ss_pred CHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCCh
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSS 1476 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~ 1476 (1495)
|||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++|+++||||+|||+|+|+|+|+|++|+++ +|.
T Consensus 1434 RALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~ 1512 (1522)
T TIGR00957 1434 RALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGI 1512 (1522)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999986 699
Q ss_pred HHHHHHHH
Q 000452 1477 FSQLVAEY 1484 (1495)
Q Consensus 1477 f~~lv~~~ 1484 (1495)
|++|+++.
T Consensus 1513 f~~l~~~~ 1520 (1522)
T TIGR00957 1513 FYSMAKDA 1520 (1522)
T ss_pred HHHHHHHc
Confidence 99999984
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=4e-200 Score=2033.82 Aligned_cols=1253 Identities=27% Similarity=0.465 Sum_probs=1095.0
Q ss_pred CCCCcccchhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHHHH
Q 000452 222 VTPYSNAGLFSVLTYTWINSLIALGNKKTLDLEDVPQLDSGNSVVGVFATFKNKLETEAGLGSGLTTLKLIKAMFRSVWK 301 (1495)
Q Consensus 222 ~~p~~~a~~~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~al~~~~~~ 301 (1495)
.+||++||+|||++|||++|++++||+++|+.+|||+|+++++++.++++|++.|+++.. ++.++++|+++++++|++
T Consensus 3 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~--~~~~~~~L~~~l~~~~~~ 80 (1490)
T TIGR01271 3 RSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELA--SAKKNPKLLNALRRCFFW 80 (1490)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHh--ccCCCChHHHHHHHHHHH
Confidence 468999999999999999999999999999999999999999999999999999987641 123467999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 302 DVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDF-ENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIRLRAALIAM 380 (1495)
Q Consensus 302 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~-~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~rir~~L~~~ 380 (1495)
.+++.++++++.+++.+++|++++.+++|+++.+.. ...+|.++++++++.++..++.++++|...++++++|++|+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~ 160 (1490)
T TIGR01271 81 RFVFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSL 160 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999543322 2468899999999999999999999999999999999999999
Q ss_pred HHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 381 IYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWYIHDPWLFLFEVALSFLILYKSLGIASVAAFFGTVIFMLVNVP 460 (1495)
Q Consensus 381 iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~~i~~~~~~~~ 460 (1495)
||+|+|+++....++.++|+++|+|++|++++.+++.++|.+|..|+++++++++||.++|+++++|++++++++|++.+
T Consensus 161 iy~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~ 240 (1490)
T TIGR01271 161 IYKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQAC 240 (1490)
T ss_pred HHHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 461 LSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFVFWCAPTFVSV 540 (1495)
Q Consensus 461 ~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~v~~ 540 (1495)
+++...++++++|+++|+|++.++|+|+|||+||+|+||+.|.+++++.|++|++.+++..+......++++..|.++++
T Consensus 241 ~~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1490)
T TIGR01271 241 LGQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVF 320 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999888888888899999999
Q ss_pred HHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccEE
Q 000452 541 ITFGTCILLKVPLESGKVLSAIATFRLLQILIY-KLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEKQPRGSSETAIE 619 (1495)
Q Consensus 541 ~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~-~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~ 619 (1495)
++|++|.+.++ ++++++||++++|++++.|+. .+|..+..+.++++|++||++||..+|.++.... .....++
T Consensus 321 ~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~-----~~~~~i~ 394 (1490)
T TIGR01271 321 LSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEYN-----LTTTEVE 394 (1490)
T ss_pred HHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccc-----CCCCceE
Confidence 99999988754 789999999999999999985 7999999999999999999999998776432111 1123599
Q ss_pred EEeeEEEecCC-------------------------------CCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhC
Q 000452 620 IADGNFSWDIS-------------------------------SHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILG 668 (1495)
Q Consensus 620 ~~~~~~~~~~~-------------------------------~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG 668 (1495)
++|++|+|+.. ..+++|+|+||+|++|++++|+|||||||||||++|+|
T Consensus 395 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G 474 (1490)
T TIGR01271 395 MVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMG 474 (1490)
T ss_pred EecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhC
Confidence 99999999531 01468999999999999999999999999999999999
Q ss_pred CCCCCCcEEEEcCeEEEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 669 EVPKISGTLKLCGTKAYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 669 ~~~~~~G~v~~~g~~ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
+++|++|+|.++|.++||+|+||++++||+|||+||.++++++|++++++|+|++|++.+|.||+|.+|++|.+||||||
T Consensus 475 ~~~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqk 554 (1490)
T TIGR01271 475 ELEPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQR 554 (1490)
T ss_pred CCCCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDV 828 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l 828 (1495)
|||+||||+|++|+||||||||||||++++++++++|+.+.++++|+|+|||+++.++.||+|++|++|++++.|+++++
T Consensus 555 qRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l 634 (1490)
T TIGR01271 555 ARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSEL 634 (1490)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999999999999999888877789999999999999989999999999999999999999
Q ss_pred HhcCCchhHHHHHHHhhhc---c--------------cc--c-----ccC------CCCCC--CCC--------------
Q 000452 829 INSGTDFMELVDAHKQALS---T--------------LD--S-----IEG------RPLSE--KGS-------------- 862 (1495)
Q Consensus 829 ~~~~~~~~~l~~~~~~~~~---~--------------~~--~-----~~~------~~~~~--~~~-------------- 862 (1495)
.+.+..+.+.........+ . .+ . .+. .+..+ +..
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (1490)
T TIGR01271 635 QAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASARK 714 (1490)
T ss_pred HhcChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8765556555431110000 0 00 0 000 00000 000
Q ss_pred ---------C---CCCCCCCCccc---------------------c----------c--------ccc--c-ccc-c---
Q 000452 863 ---------A---NGENDGTSATD---------------------G----------V--------VKE--V-ENK-E--- 884 (1495)
Q Consensus 863 ---------~---~~~~~~~~~~~---------------------~----------~--------~~~--~-~~~-~--- 884 (1495)
. ........... . . ... . ... .
T Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 794 (1490)
T TIGR01271 715 FSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQT 794 (1490)
T ss_pred cccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccc
Confidence 0 00000000000 0 0 000 0 000 0
Q ss_pred ---------c-----cc--------cccc----c----ccchhhhhhHHHHHhhcCchHHHHHHHHHHhhhhhHHHHHHH
Q 000452 885 ---------V-----QN--------DRED----K----VAEPQRQLVQEEEREKGKVEFSVYWKYITAAYGGVLVPFILL 934 (1495)
Q Consensus 885 ---------~-----~~--------~~~~----~----~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~ 934 (1495)
. .. ..+. . .+.....+.++|+++.|.++|++|+.|+++.+++.++.++++
T Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~~~~~~~~~~ 874 (1490)
T TIGR01271 795 SFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNRNLVFVLIFCL 874 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCcHHHHHHHHH
Confidence 0 00 0000 0 000112346678889999999999999998866555555566
Q ss_pred HHHHHHHHHHhhHHHHHhhcccC------CCC---C-----CC--c-chhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 935 AQTLFQILQIASNYWIAWATPAS------KDI---K-----PR--V-TGSML-LIVFVALAFGSSFCILARSTLLATAGY 996 (1495)
Q Consensus 935 ~~~~~~~~~~~~~~wl~~~~~~~------~~~---~-----~~--~-~~~~~-~~~y~~l~~~~~~~~~~~~~~~~~~~~ 996 (1495)
+.++.+++..++++|+++|.... ... . |. . ...+| +++|++++++..++.+++.+++...+.
T Consensus 875 ~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 954 (1490)
T TIGR01271 875 VIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTLL 954 (1490)
T ss_pred HHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66788999999999998765311 000 0 00 0 11223 566666666677788889999999999
Q ss_pred HHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 997 KTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPV 1076 (1495)
Q Consensus 997 ~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~ 1076 (1495)
++++++|.+++++++++|++|||++|+|+|+|||++|++.+|..+|..+..++..++.+++.++++++.+|+++++++|+
T Consensus 955 ~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~~~l 1034 (1490)
T TIGR01271 955 TVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAAIPV 1034 (1490)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Q 000452 1077 IATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFR 1156 (1495)
Q Consensus 1077 ~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~r 1156 (1495)
++++++++++|.+++|+++|++..+++|+++|+.|+++|+.|||+|+++++|.+++.+..|.+++.++.....++|+..+
T Consensus 1035 ~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~ 1114 (1490)
T TIGR01271 1035 AVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMR 1114 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccc--
Q 000452 1157 LDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIE-- 1234 (1495)
Q Consensus 1157 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~-- 1234 (1495)
+++++.+.+..++++.+. ...+++|.+|++++|++.+...+.++++.+.++|+.+.|+||+.+|.+.|+|++...+
T Consensus 1115 ~~~i~~~~~~~~~~l~~~--~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~ 1192 (1490)
T TIGR01271 1115 IDIIFVFFFIAVTFIAIG--TNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGG 1192 (1490)
T ss_pred HHHHHHHHHHHHHHHHHH--HhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccc
Confidence 999877654443333222 2235788899999999999999999999999999999999999999998887542211
Q ss_pred ------------cCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC
Q 000452 1235 ------------ESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPA 1302 (1495)
Q Consensus 1235 ------------~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~ 1302 (1495)
...+|+.||..|.|+|+||+|+|+++.++||+||||+|+||||||||||||||||||+++|+|+++ +
T Consensus 1193 ~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~ 1271 (1490)
T TIGR01271 1193 GKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-T 1271 (1490)
T ss_pred cccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C
Confidence 123456799999999999999999888899999999999999999999999999999999999998 7
Q ss_pred ccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCC
Q 000452 1303 AGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENG 1382 (1495)
Q Consensus 1303 ~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G 1382 (1495)
+|+|.|||+||++++++++|++|+||||||+||+||||+||||+++++|+++|+||++|+++++|.++|+||||+|+|+|
T Consensus 1272 ~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G 1351 (1490)
T TIGR01271 1272 EGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGG 1351 (1490)
T ss_pred CcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEE
Q 000452 1383 ENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 1462 (1495)
Q Consensus 1383 ~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE 1462 (1495)
.||||||||||||||||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++|+.+||||+|||+|+|+|
T Consensus 1352 ~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE 1431 (1490)
T TIGR01271 1352 YVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGSSVKQ 1431 (1490)
T ss_pred CcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhHHhhcCCChHHHHHHHHhh
Q 000452 1463 YDSPRKLLENKSSSFSQLVAEYTQ 1486 (1495)
Q Consensus 1463 ~gsp~~Ll~~~~s~f~~lv~~~~~ 1486 (1495)
+|+|++|++ ++|.|++|+++...
T Consensus 1432 ~g~p~~Ll~-~~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1432 YDSIQKLLN-ETSLFKQAMSAADR 1454 (1490)
T ss_pred eCCHHHHHc-CCcHHHHHHHHhCh
Confidence 999999997 57999999998875
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.3e-190 Score=1938.96 Aligned_cols=1258 Identities=30% Similarity=0.484 Sum_probs=1086.5
Q ss_pred CCCCCCcccchhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCchHHHHHHHHHH----------HHhhhcc-------
Q 000452 220 DTVTPYSNAGLFSVLTYTWINSLIALGNKKTLDLEDVPQLDSGNSVVGVFATFKNK----------LETEAGL------- 282 (1495)
Q Consensus 220 ~~~~p~~~a~~~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~----------~~~~~~~------- 282 (1495)
..+.||++||||.++++.|++|++.+..|..|+.+|+|+...+.++-++.-++.+. |+-..|.
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (1560)
T PTZ00243 57 YTPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLD 136 (1560)
T ss_pred CCCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeecc
Confidence 45679999999999999999999999999999999999999999886665554443 3210000
Q ss_pred --------------------------------------------------------------------------------
Q 000452 283 -------------------------------------------------------------------------------- 282 (1495)
Q Consensus 283 -------------------------------------------------------------------------------- 282 (1495)
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (1560)
T PTZ00243 137 ASSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSS 216 (1560)
T ss_pred ccccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeecc
Confidence
Q ss_pred ---------CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHH
Q 000452 283 ---------GSGLTTLKLIKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKL 353 (1495)
Q Consensus 283 ---------~~~~~~~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~ 353 (1495)
...++..+|+++++++||+.+++.++++++.+++.+++|++++.+++++++++.....|+.++++++++.+
T Consensus 217 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~ 296 (1560)
T PTZ00243 217 TGSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQL 296 (1560)
T ss_pred cccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHH
Confidence 00123458999999999999999999999999999999999999999997654333457888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhc--CCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 000452 354 VECLCQRFFVFRLEQLGIRLRAALIAMIYNKGLKLSSQAKQ--GNTSGEIINFMTVDAERVAELSWYIHDPWLFLFEVAL 431 (1495)
Q Consensus 354 ~~~~~~~~~~~~~~~~g~rir~~L~~~iy~K~L~ls~~~~~--~~~~G~i~nl~s~D~~~i~~~~~~~~~~w~~pl~i~~ 431 (1495)
+.+++.+++.|...+.++++|++|.+.+|+|+++++..+.. +.++|+++|+|++|++++.+++.++|.+|..|+++++
T Consensus 297 ~~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~ 376 (1560)
T PTZ00243 297 IQSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLL 376 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987665 5689999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHH
Q 000452 432 SFLILYKSLGIASVAAFFGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRK 511 (1495)
Q Consensus 432 ~~~lL~~~lG~~~l~gl~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~ 511 (1495)
++++||.++|+++++|++++++++|++.++++.+.++++++|+++|+|++.++|+++|||+||+||||+.|.+++++.|+
T Consensus 377 ~~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~ 456 (1560)
T PTZ00243 377 SILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRA 456 (1560)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 512 SESGWLKRCLYTSSITSFVFWCAPTFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQR 591 (1495)
Q Consensus 512 ~E~~~l~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~R 591 (1495)
+|++.+++..+..++..++.+.+|.++.+++|++|++.|++||++++|+++++|++++.|+.++|..++.+.++++|++|
T Consensus 457 ~El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~R 536 (1560)
T PTZ00243 457 RELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKR 536 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCcccc----c-----------------------------CCC-------------------------CCC
Q 000452 592 IASFFCLDELQPDLV----E-----------------------------KQP-------------------------RGS 613 (1495)
Q Consensus 592 I~~fL~~~e~~~~~~----~-----------------------------~~~-------------------------~~~ 613 (1495)
|++||..+|...... + +.| ...
T Consensus 537 I~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (1560)
T PTZ00243 537 ISTFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRH 616 (1560)
T ss_pred HHHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccc
Confidence 999998776311000 0 000 000
Q ss_pred CcccEEEEeeEEEecCC-------------------------------------CCCCccccceEEeeCCcEEEEEecCC
Q 000452 614 SETAIEIADGNFSWDIS-------------------------------------SHNPTLKDINLKVFHGMRVAVCGTVG 656 (1495)
Q Consensus 614 ~~~~i~~~~~~~~~~~~-------------------------------------~~~~~L~~i~l~i~~G~~~~i~G~~G 656 (1495)
....+.++|++++|+.+ +++++|+|+||+|++|++++|+||||
T Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nG 696 (1560)
T PTZ00243 617 PSPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATG 696 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCC
Confidence 01235666666654310 13468999999999999999999999
Q ss_pred ccHHHHHHHHhCCCCCCCcEEEEcCeEEEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccc
Q 000452 657 SGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVV 736 (1495)
Q Consensus 657 sGKSTLl~~llG~~~~~~G~v~~~g~~ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~i 736 (1495)
|||||||++|+|+++|++|+|.+++.++||||+||++++|++|||.|+.++++++|++++++|++++|++.+|+|++|.+
T Consensus 697 sGKSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i 776 (1560)
T PTZ00243 697 SGKSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEI 776 (1560)
T ss_pred CcHHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHh
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred cCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeC
Q 000452 737 GERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKD 816 (1495)
Q Consensus 737 g~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~ 816 (1495)
|++|.+|||||||||+||||+|++|+|||||||||+||++++++++++++.+.++|+|+|+|||+++.++.||+|++|++
T Consensus 777 ~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~ 856 (1560)
T PTZ00243 777 GEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGD 856 (1560)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999999888777789999999999999989999999999
Q ss_pred CEEEEecChHHHHhcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccc-cccccccccc
Q 000452 817 GKITQAGKYTDVINSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEV-QNDREDKVAE 895 (1495)
Q Consensus 817 G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 895 (1495)
|++.+.|+++++.+.+ .+.++........+.. +.....+.......+....... ......... ...+......
T Consensus 857 G~i~~~G~~~~l~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 930 (1560)
T PTZ00243 857 GRVEFSGSSADFMRTS-LYATLAAELKENKDSK---EGDADAEVAEVDAAPGGAVDHE--PPVAKQEGNAEGGDGAALDA 930 (1560)
T ss_pred CEEEEecCHHHHHhCh-HHHHHHHhhccccccc---cccccccccccccccccccccc--cccccccccccccccccccc
Confidence 9999999999998653 3554443211110000 0000000000000000000000 000000000 0000000111
Q ss_pred hhhhhhHHHHHhhcCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHH
Q 000452 896 PQRQLVQEEEREKGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVA 975 (1495)
Q Consensus 896 ~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~ 975 (1495)
...++.++|+++.|.++|++|+.|++..++..++.+++++.++.+++..++++|+++|++.. ...+...|+.+|++
T Consensus 931 ~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~----~~~~~~~~l~~y~~ 1006 (1560)
T PTZ00243 931 AAGRLMTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRS----FKLSAATYLYVYLG 1006 (1560)
T ss_pred ccchhhhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----cCCCcccHHHHHHH
Confidence 22356677888899999999999999987666555555556677888899999999887521 12234567888998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHH
Q 000452 976 LAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRV 1055 (1495)
Q Consensus 976 l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~ 1055 (1495)
+.++..++.+++.+.....+.++++.+|++++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+
T Consensus 1007 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~ 1086 (1560)
T PTZ00243 1007 IVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSI 1086 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHH
Q 000452 1056 LGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMEL 1135 (1495)
Q Consensus 1056 ~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~ 1135 (1495)
++.++++++.+|.++++++|++++++++.++|.+..|+++|+...+++|++++++|+++|+.|||+|++|+.|.+++.+.
T Consensus 1087 i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~ 1166 (1560)
T PTZ00243 1087 CSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRR 1166 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHH
Confidence 99999999999988888888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1136 MDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLI---SIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENK 1212 (1495)
Q Consensus 1136 ~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~---~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~ 1212 (1495)
.|.+.+..+.....++|+..++++++.+++++++++.+ ....+.+++|.++++++|+..+...+.++++.+.++|+.
T Consensus 1167 ~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~ 1246 (1560)
T PTZ00243 1167 LDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEAD 1246 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998776554433322 223445789999999999999999999999999999999
Q ss_pred hhHHHHHHHHhc-CCCCCCCc-----------------------cccCCCC---CCCCCcceEEEeeeeEEeCCCCCcce
Q 000452 1213 IISVERIFQYTC-IPSEPPLE-----------------------IEESRPN---HSWPSHGKIDLRDLQVRYAPHMPFVL 1265 (1495)
Q Consensus 1213 ~~sveRi~~~~~-~~~E~~~~-----------------------~~~~~~~---~~wp~~g~I~f~nv~~~Y~~~~~~vL 1265 (1495)
|+|+||+.+|++ .|+|+... .+...++ +.||..|.|+|+||+|+|+++.|+||
T Consensus 1247 ~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL 1326 (1560)
T PTZ00243 1247 MNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVL 1326 (1560)
T ss_pred HHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCcee
Confidence 999999999996 44442110 0011122 23567799999999999998888899
Q ss_pred eeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCC
Q 000452 1266 RGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDP 1345 (1495)
Q Consensus 1266 ~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp 1345 (1495)
+||||+|+||||||||||||||||||+++|+|+++|++|+|.|||+||+++++++||++|++|||||+||+||||+||||
T Consensus 1327 ~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp 1406 (1560)
T PTZ00243 1327 RGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDP 1406 (1560)
T ss_pred ecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccC-CCeEEEEcCCCCCCHHHHHHHH
Q 000452 1346 LEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKR-RKILMLDEATASVDTATDNLIQ 1424 (1495)
Q Consensus 1346 ~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~-~~ILiLDEaTsslD~~Td~~Iq 1424 (1495)
+++++|+|||+||++|+++++|.++|+||||.|+|+|.|||||||||||||||||++ |+|||||||||+||++||+.||
T Consensus 1407 ~~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq 1486 (1560)
T PTZ00243 1407 FLEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQ 1486 (1560)
T ss_pred ccCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999996 8999999999999999999999
Q ss_pred HHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHhhc
Q 000452 1425 QSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYTQR 1487 (1495)
Q Consensus 1425 ~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~~~ 1487 (1495)
++|++.|++||||+||||++|+.+||+|+|||+|+|+|+|+|+||+++++|.|++|+++.+..
T Consensus 1487 ~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~~~ 1549 (1560)
T PTZ00243 1487 ATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALGRS 1549 (1560)
T ss_pred HHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChh
Confidence 999999999999999999999999999999999999999999999988789999999887643
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.6e-143 Score=1356.34 Aligned_cols=1154 Identities=22% Similarity=0.287 Sum_probs=849.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhhCCC--Ccc----hhHHHHHHHHHHHHHHHHHHH-HHHHHHH
Q 000452 297 RSVWKDVLLTALVAIVCTLATYVGPYLI---DTLVQYLSGKR--DFE----NEGYALVSAFCVAKLVECLCQ-RFFVFRL 366 (1495)
Q Consensus 297 ~~~~~~~~~~~~~~l~~~~~~~~~P~ll---~~li~~~~~~~--~~~----~~g~~l~~~l~~~~~~~~~~~-~~~~~~~ 366 (1495)
.+-+.++++..+-.+...+....+|++. ..+.+.+.... ... ..++.+ +.+.+..++.++++ ..|.+..
T Consensus 21 ~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~-~~lg~~~~~~~~~q~~c~~~~g 99 (1228)
T KOG0055|consen 21 FADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYF-VYLGVGVFISGFIQVSCWMRTG 99 (1228)
T ss_pred ccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 3345555555555555555556666543 44444443222 100 111111 11222223333333 4566667
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHHHHH
Q 000452 367 EQLGIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-----YIHDPWLFLFEVALSFLILYKSLG 441 (1495)
Q Consensus 367 ~~~g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-----~~~~~w~~pl~i~~~~~lL~~~lG 441 (1495)
.|...|+|......+ ||.....++.+.+|++.+.|+.|+++|++.+. .+|.+-.....++++++..|+
T Consensus 100 eRq~~riR~~yl~~i----LrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~~W~--- 172 (1228)
T KOG0055|consen 100 ERQTARIRSKYLKAI----LRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYYGWK--- 172 (1228)
T ss_pred HHHHHHHHHHHHHHH----HhCccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 777777777665555 55566777778889999999999999998653 444444444444455444442
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 442 IASVAAFFGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCL 521 (1495)
Q Consensus 442 ~~~l~gl~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~ 521 (1495)
.+++++....++......+++.+.+...+.+++..+--....|.+.+||++-.++-|+.-.++-.+ +++..+|..
T Consensus 173 -Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~----~L~~~~k~g 247 (1228)
T KOG0055|consen 173 -LTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSK----ALENALKFG 247 (1228)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHH----HHHHHHHHH
Confidence 345556666666666777788888888888888888889999999999999999999887666433 333333333
Q ss_pred HHHHHHHHHH------HHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 522 YTSSITSFVF------WCAPTFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASF 595 (1495)
Q Consensus 522 ~~~~~~~~~~------~~~p~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~f 595 (1495)
....+...+. +........++||..++..+..++|.+|+++...-+-...+......+..+..|+++..+|.+-
T Consensus 248 i~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~ 327 (1228)
T KOG0055|consen 248 IKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFET 327 (1228)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHH
Confidence 3333222222 1222233455677667777789999998888665566677778888899999999999999998
Q ss_pred hcCC-CCCcccccCCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCC
Q 000452 596 FCLD-ELQPDLVEKQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS 674 (1495)
Q Consensus 596 L~~~-e~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~ 674 (1495)
++.. +.++............+.|+++|++|+|+..++.++|+|+||+|++|+.+|+||||||||||++++|.+.++|++
T Consensus 328 i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~ 407 (1228)
T KOG0055|consen 328 IDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTS 407 (1228)
T ss_pred hcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 7653 333322122223334578999999999997777789999999999999999999999999999999999999999
Q ss_pred cEEEEcCe-------------EEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCC
Q 000452 675 GTLKLCGT-------------KAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERG 740 (1495)
Q Consensus 675 G~v~~~g~-------------~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g 740 (1495)
|+|.++|. +|.|+|+|-+|++||+|||.||+| ..+++..++.+.....+.+..+|+|++|.+||+|
T Consensus 408 G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g 487 (1228)
T KOG0055|consen 408 GEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERG 487 (1228)
T ss_pred ceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCC
Confidence 99999983 599999999999999999999986 4678888999999999999999999999999999
Q ss_pred CccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEE
Q 000452 741 INLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKIT 820 (1495)
Q Consensus 741 ~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~ 820 (1495)
.+|||||||||||||||.+||+||||||||||||++.++ +.++.+....+|+|.|+|+|+++.+.+||+|++|++|+|+
T Consensus 488 ~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~-~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~Iv 566 (1228)
T KOG0055|consen 488 VQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESER-VVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIV 566 (1228)
T ss_pred CCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHH-HHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEE
Confidence 999999999999999999999999999999999998755 5577888888999999999999999999999999999999
Q ss_pred EecChHHHHhcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchhhhh
Q 000452 821 QAGKYTDVINSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQL 900 (1495)
Q Consensus 821 ~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 900 (1495)
+.|+++||++.++.|.++++.++......+..+..+..+......... . ......+.. ..........+.++.....
T Consensus 567 E~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s-~-~~~~~~~~~-~~~~~~~~~~~~e~~~~~~ 643 (1228)
T KOG0055|consen 567 EQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSS-S-SSPSLSRGS-NRSNLLSVKPEGEDPEEPV 643 (1228)
T ss_pred EecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccc-c-ccccccCCc-ccccccccccccccccccc
Confidence 999999999999999999988754432111000000000000000000 0 000000000 0000000000000000000
Q ss_pred hHHHHHhhcCchHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCC---CcchhHHHHHHHHH
Q 000452 901 VQEEEREKGKVEFSVYWKYITAAYG-GVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKP---RVTGSMLLIVFVAL 976 (1495)
Q Consensus 901 ~~~e~~~~g~v~~~~y~~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~---~~~~~~~~~~y~~l 976 (1495)
.+++ -.++ +++-++.... |.++.+..++.++..+..-...+.+++........++ ......|..+|+++
T Consensus 644 -~~~~---~~~s---~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l 716 (1228)
T KOG0055|consen 644 -SEED---EKVS---FWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGL 716 (1228)
T ss_pred -cccc---cccc---HHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHH
Confidence 1111 1222 3333333322 2222222222222222211112222221111100111 11233488999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccc--cccccchhHHhcchhHHHhhhHHHHHHHHHHHHH
Q 000452 977 AFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDA--TPSGRIINRASTDQSAVDLSIPALIGSFAFSIIR 1054 (1495)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~--tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~ 1054 (1495)
++++.++.++..+++.+.|.+..++++.++++++++.++.|||. +. |+|.+|+.+|...+...+...+..++.++..
T Consensus 717 ~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~ 795 (1228)
T KOG0055|consen 717 GIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAA 795 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999996 45 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHH
Q 000452 1055 VLGVIGVMSLVAWQVFIVFI---PVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDT 1131 (1495)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~v~i---p~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~ 1131 (1495)
++..+++.++++|.++++.+ |++++..+.+.+++.. ..+..............|+++.++||++|+.|++|.+.
T Consensus 796 ~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~---~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~ 872 (1228)
T KOG0055|consen 796 VIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKG---FSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMEL 872 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHH
Confidence 99999999999999988765 4444444444444433 22333333444556788999999999999999999999
Q ss_pred HHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1132 NMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFA---FSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLAC 1207 (1495)
Q Consensus 1132 ~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~---~~~~~-~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~ 1207 (1495)
+.+..+...+..+... .|-++...+-..++++ ++..+ ..+...|.+++..+-..+.-...-...+........
T Consensus 873 y~~~l~~p~~~~~~~~---~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~P 949 (1228)
T KOG0055|consen 873 YKEELEKPRKSSFKRG---LISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAP 949 (1228)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCc
Confidence 9998887776655443 2333333333333222 22222 233456777776655444433333344555666667
Q ss_pred HHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCC-CCcceeeeeEEeeCCcEEEEEcCCCC
Q 000452 1208 QMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPH-MPFVLRGISCTFPGEKKTGIVGRTGS 1286 (1495)
Q Consensus 1208 ~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~-~~~vL~~Is~~I~~GekvgIVGrTGS 1286 (1495)
++-....|+.++++.++-+++-+...+. ....-+-+|+|+|+||+|+|+.. ..+||+|+|++|++|+.+|+||+|||
T Consensus 950 d~~ka~~Aa~~iF~i~dr~~~i~~~~~~--~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGs 1027 (1228)
T KOG0055|consen 950 DISKAKIAAGSIFEILDRKPTIDPDSTS--GGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGS 1027 (1228)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCCC--CCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCC
Confidence 7888899999999999866532211111 11111358999999999999733 13699999999999999999999999
Q ss_pred CHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcH
Q 000452 1287 GKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGD 1365 (1495)
Q Consensus 1287 GKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~ 1365 (1495)
||||++.+|.|+|+|.+|.|.|||.||++++++.||++|++|.|||+||++||||||... .+.+.+||.+|++.++.++
T Consensus 1028 GKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~ 1107 (1228)
T KOG0055|consen 1028 GKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHN 1107 (1228)
T ss_pred CHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHH
Confidence 999999999999999999999999999999999999999999999999999999999977 4589999999999999999
Q ss_pred HHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchh
Q 000452 1366 EVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITS 1445 (1495)
Q Consensus 1366 ~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~t 1445 (1495)
||.++|+||||.|||+|.+||||||||+|||||++||||||+||||||+||.++|+.+|++|++...+||.|+|||||+|
T Consensus 1108 FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLST 1187 (1228)
T KOG0055|consen 1108 FISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLST 1187 (1228)
T ss_pred HHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHH
Q 000452 1446 VIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEY 1484 (1495)
Q Consensus 1446 i~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~ 1484 (1495)
|++||.|.|+++|+|+|.|+|++|++ ++|.|++|++..
T Consensus 1188 IqnaD~I~Vi~~G~VvE~GtH~~L~~-~~G~Y~~Lv~~q 1225 (1228)
T KOG0055|consen 1188 IQNADVIAVLKNGKVVEQGTHDELLA-KRGIYFRLVQLQ 1225 (1228)
T ss_pred hhcCCEEEEEECCEEEecccHHHHHh-CCCchHHHhhhc
Confidence 99999999999999999999999998 679999998754
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=3.9e-135 Score=1380.34 Aligned_cols=1187 Identities=18% Similarity=0.196 Sum_probs=863.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 290 KLIKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQL 369 (1495)
Q Consensus 290 ~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 369 (1495)
.+++..-+.+++.++++.++.++..++..+.|+++..+++.+...+. ...+++.+++..++..++.....+...++
T Consensus 49 ~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 124 (1466)
T PTZ00265 49 LPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGEN----VNDIIFSLVLIGIFQFILSFISSFCMDVV 124 (1466)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555677778888888889998888999999999987642211 11222333333444455555666777788
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 370 GIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELS-WYIHDPWLFLFEVALSFLILYKSLGIASVAAF 448 (1495)
Q Consensus 370 g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~-~~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl 448 (1495)
+.++...+...+|+|.++++....++.+.|++.|.++.|++.+.+.+ ..+..+...++.++.++++++..--..+++.+
T Consensus 125 ~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l 204 (1466)
T PTZ00265 125 TTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLCIT 204 (1466)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999998888999999999999999998865 34555556666666666655543333445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 449 FGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITS 528 (1495)
Q Consensus 449 ~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~ 528 (1495)
+++.+++.+..++.+..++..++..+..++..+.+.|.++|||+||.|+-|+.+.++..+..+.-.+...+.....+...
T Consensus 205 ~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~ 284 (1466)
T PTZ00265 205 CVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHI 284 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555556666777888888888888889999999999999999999999999988887654444443333333333322
Q ss_pred HHHHHH--HHHHHHHHHHHHHHhcC--------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000452 529 FVFWCA--PTFVSVITFGTCILLKV--------PLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCL 598 (1495)
Q Consensus 529 ~~~~~~--p~~v~~~~f~~~~~~~~--------~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~ 598 (1495)
.+.... -..+.+++||.+.+..+ .++++.+++++...-+...++..+...+..+..+++|.+||.+.++.
T Consensus 285 ~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~ 364 (1466)
T PTZ00265 285 GMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINR 364 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 222211 12233456677666543 57888888766544444445555556688899999999999999976
Q ss_pred CCCCcccccCCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEE
Q 000452 599 DELQPDLVEKQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLK 678 (1495)
Q Consensus 599 ~e~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~ 678 (1495)
++..+......... ....|+++|++|+|+...+.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.
T Consensus 365 ~~~~~~~~~~~~~~-~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~ 443 (1466)
T PTZ00265 365 KPLVENNDDGKKLK-DIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDII 443 (1466)
T ss_pred CCCCCCCCCCccCC-CCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEE
Confidence 54322111111111 11369999999999743345799999999999999999999999999999999999999999999
Q ss_pred Ec-C-------------eEEEEccCCcccCccHHHHHhcCCC--------------------------------------
Q 000452 679 LC-G-------------TKAYVAQSPWIQSGKIEDNILFGKE-------------------------------------- 706 (1495)
Q Consensus 679 ~~-g-------------~~ayv~Q~~~l~~~ti~enI~fg~~-------------------------------------- 706 (1495)
++ | .++||+|+|.+|++||+|||.+|..
T Consensus 444 i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (1466)
T PTZ00265 444 INDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLN 523 (1466)
T ss_pred EeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhh
Confidence 95 4 2599999999999999999999741
Q ss_pred --------------------CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEe
Q 000452 707 --------------------MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLF 766 (1495)
Q Consensus 707 --------------------~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illL 766 (1495)
.++++..++++.++++++++.+|+|.+|.+|++|.+|||||||||+||||++++|+|+||
T Consensus 524 ~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlL 603 (1466)
T PTZ00265 524 DMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILIL 603 (1466)
T ss_pred hcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 234567788888999999999999999999999999999999999999999999999999
Q ss_pred cCcCCccCHHHHHHHHHHHHHHHh--CCCEEEEEecCCCccccCCEEEEEeCC---------------------------
Q 000452 767 DDPFSAVDAHTGSHLFKEVLLGLL--NSKTVLYVTHQVEFLPAADLVLVIKDG--------------------------- 817 (1495)
Q Consensus 767 Dep~saLD~~~~~~i~~~~~~~~~--~~~tvIlvTH~~~~l~~~d~i~~l~~G--------------------------- 817 (1495)
|||||+||+++++.+.+ .+.... +|+|+|+|||+++.+..||+|++|++|
T Consensus 604 DEpTSaLD~~se~~i~~-~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1466)
T PTZ00265 604 DEATSSLDNKSEYLVQK-TINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNN 682 (1466)
T ss_pred eCcccccCHHHHHHHHH-HHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccccccccccc
Confidence 99999999999888865 455443 489999999999999889999999986
Q ss_pred --------------------EEEEecChHHHHh-cCCchhHHHHHHHhhhcccc-c-ccCCCCCCCCCCCCCCCCC--Cc
Q 000452 818 --------------------KITQAGKYTDVIN-SGTDFMELVDAHKQALSTLD-S-IEGRPLSEKGSANGENDGT--SA 872 (1495)
Q Consensus 818 --------------------~i~~~g~~~~l~~-~~~~~~~l~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~--~~ 872 (1495)
+|+++|+++|+++ ..+.|..++..+........ . .+................. ..
T Consensus 683 ~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 762 (1466)
T PTZ00265 683 KDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYKDSERGYDPDE 762 (1466)
T ss_pred cccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcccccccccccccccccccccccccccccccccc
Confidence 5999999999997 57788888866432211100 0 0000000000000000000 00
Q ss_pred ccc-ccccccccc--ccccc--cc-cccchhhhhhHHHHH----hhcCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 000452 873 TDG-VVKEVENKE--VQNDR--ED-KVAEPQRQLVQEEER----EKGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQIL 942 (1495)
Q Consensus 873 ~~~-~~~~~~~~~--~~~~~--~~-~~~~~~~~~~~~e~~----~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~ 942 (1495)
... ......... ..... +. .......+....++. .+....+..+++++.......+ +.+++.++..++
T Consensus 763 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 840 (1466)
T PTZ00265 763 MNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVT--IIALSILVAGGL 840 (1466)
T ss_pred ccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 000 000000000 00000 00 000000000000000 0011122333444433222211 122222233333
Q ss_pred HHhhHHHHHhhcccCCC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccc-
Q 000452 943 QIASNYWIAWATPASKD-IKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDA- 1020 (1495)
Q Consensus 943 ~~~~~~wl~~~~~~~~~-~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~- 1020 (1495)
....++.++.+.+..-. .........|..++++++++..++.+++.++....+.+...+++.++++++++.|++|||+
T Consensus 841 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~ 920 (1466)
T PTZ00265 841 YPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQD 920 (1466)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC
Confidence 33334444333221000 0001123356667777788888889999999999999999999999999999999999996
Q ss_pred -cccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH
Q 000452 1021 -TPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYIS--SARELSRL 1097 (1495)
Q Consensus 1021 -tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~--~~r~l~rl 1097 (1495)
+++|++++|+++|++.+...+...+..++..++.+++.++++++.+|.++++++|++++.........+ ..++.++.
T Consensus 921 ~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1000 (1466)
T PTZ00265 921 KHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARLTANKDVEKK 1000 (1466)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 889999999999999999999999999999999999999999999999887776654443322211111 11122111
Q ss_pred -------------HHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1098 -------------VGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNIT 1164 (1495)
Q Consensus 1098 -------------~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~ 1164 (1495)
+....+.....++|+++|++|||+|+.|+++.+++.+..+...+..........++....+.+..+.
T Consensus 1001 ~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1080 (1466)
T PTZ00265 1001 EINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFI 1080 (1466)
T ss_pred hccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233456788999999999999999999999999999988877766655444444433344443333
Q ss_pred HHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCC-CCCC
Q 000452 1165 FAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRP-NHSW 1242 (1495)
Q Consensus 1165 ~~~~~~~-~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~-~~~w 1242 (1495)
.+++.++ ...+..|.++.|.+..++.+.+........+...+.+++....|.+|+.++++.+++.+.......+ +...
T Consensus 1081 ~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~ 1160 (1466)
T PTZ00265 1081 NSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKN 1160 (1466)
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCC
Confidence 3332222 2334578888887666555544444455667778888999999999999999876543211111110 0112
Q ss_pred CCcceEEEeeeeEEeCCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC--------------------
Q 000452 1243 PSHGKIDLRDLQVRYAPH-MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-------------------- 1301 (1495)
Q Consensus 1243 p~~g~I~f~nv~~~Y~~~-~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-------------------- 1301 (1495)
+..|.|+|+||+|+|+.+ ..+||+|+||+|+|||+|||||+||||||||+++|+|+|+|
T Consensus 1161 ~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~ 1240 (1466)
T PTZ00265 1161 DIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQ 1240 (1466)
T ss_pred CCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccc
Confidence 346889999999999743 23699999999999999999999999999999999999999
Q ss_pred ----------------------------------CccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCC-
Q 000452 1302 ----------------------------------AAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL- 1346 (1495)
Q Consensus 1302 ----------------------------------~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~- 1346 (1495)
++|+|+|||+||+++++++||++|+||||||+||+|||||||...
T Consensus 1241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~ 1320 (1466)
T PTZ00265 1241 DYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGK 1320 (1466)
T ss_pred ccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCC
Confidence 699999999999999999999999999999999999999999876
Q ss_pred CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHH
Q 000452 1347 EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQS 1426 (1495)
Q Consensus 1347 ~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~ 1426 (1495)
++++|+||++|++.++++|+|.++|+||||.|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|+++
T Consensus 1321 ~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~ 1400 (1466)
T PTZ00265 1321 EDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKT 1400 (1466)
T ss_pred CCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhc--CCcEEEEEecCchhhhccCEEEEEeC----cEE-EEecChhHHhhcCCChHHHHHHHH
Q 000452 1427 LRQHF--SDCTVITIAHRITSVIDSDMVLLLSH----GLI-EEYDSPRKLLENKSSSFSQLVAEY 1484 (1495)
Q Consensus 1427 Ir~~f--~~~TVI~IAHRl~ti~~~DrIlVL~~----G~i-vE~gsp~~Ll~~~~s~f~~lv~~~ 1484 (1495)
|++.. +++|+|+||||++++.+||+|+||++ |++ +|.|+|+||+++++|.|++|++..
T Consensus 1401 L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1401 IVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred HHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 99884 69999999999999999999999999 995 599999999975679999998753
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-91 Score=843.81 Aligned_cols=548 Identities=23% Similarity=0.348 Sum_probs=475.2
Q ss_pred HHHHHHHHhhHHHHHhhcccCCC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCc
Q 000452 937 TLFQILQIASNYWIAWATPASKD-IKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPM 1015 (1495)
Q Consensus 937 ~~~~~~~~~~~~wl~~~~~~~~~-~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~ 1015 (1495)
++.....++.|+.+....+.... .+..........+..++.++++++.++|.+++.+.+.+...+++..++++++|..+
T Consensus 157 ~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~rv~~rlR~~lF~sil~Qdi 236 (716)
T KOG0058|consen 157 LVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAGERVVARLRTDLFRSLLRQDI 236 (716)
T ss_pred HHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 34444556666655422221111 11112233456677888899999999999999999999999999999999999999
Q ss_pred ccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1016 SFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELS 1095 (1495)
Q Consensus 1016 ~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~ 1095 (1495)
.|||.+.+|++++|+++|...+...++..+...+.+.++.++.+++|++++|.+.++.+..+++...+.++|.+..|++.
T Consensus 237 aFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS 316 (716)
T KOG0058|consen 237 AFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVTLIVVPIVALVAKIYGKYLRKLS 316 (716)
T ss_pred hhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888777888888888888888888
Q ss_pred HHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 000452 1096 RLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVF-LIS 1174 (1495)
Q Consensus 1096 rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~-~~~ 1174 (1495)
+...++-+...+...|.+++++|+|+|+.|++..+++.+.++.-.+.......+...+....++.+.+....++.+ ..+
T Consensus 317 ~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~~~~~~~~~~siL~~Gg~L 396 (716)
T KOG0058|consen 317 KQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGSTNLLGNLAVLSILFYGGHL 396 (716)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHHHHHHhHHHHHHHHhccch
Confidence 8889999999999999999999999999999888888888777665554443333333333444444333333332 334
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeee
Q 000452 1175 IPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQ 1254 (1495)
Q Consensus 1175 ~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~ 1254 (1495)
...|.+++|..-..+.|...+...+..+...+.++-+...|.+|++||++.++.-+.. ....| . +-+|.|+|+||+
T Consensus 397 v~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~--G~~~p-~-~~~G~IeF~~Vs 472 (716)
T KOG0058|consen 397 VLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLT--GTLAP-D-HLQGVIEFEDVS 472 (716)
T ss_pred hhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCC--Ccccc-c-cccceEEEEEee
Confidence 4578899999999999999999999999999999999999999999999876654332 11111 2 468999999999
Q ss_pred EEeCCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCc
Q 000452 1255 VRYAPH-MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPV 1333 (1495)
Q Consensus 1255 ~~Y~~~-~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~ 1333 (1495)
|.|+.. ..+||||+||+|+|||.||+||||||||||++++|.|+|+|++|+|++||+||++++.+.||++||+|.|||+
T Consensus 473 FaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~~~~lr~~Ig~V~QEPv 552 (716)
T KOG0058|consen 473 FAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDINHKYLRRKIGLVGQEPV 552 (716)
T ss_pred eecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcCHHHHHHHeeeeeccce
Confidence 999754 2369999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCC
Q 000452 1334 MFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEAT 1412 (1495)
Q Consensus 1334 LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaT 1412 (1495)
||+|||||||.+. .+.+||||.+|+++++.+|||.++|+||||.|||+|..|||||||||+|||||+|||+||||||||
T Consensus 553 LFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIARALlr~P~VLILDEAT 632 (716)
T KOG0058|consen 553 LFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIARALLRNPRVLILDEAT 632 (716)
T ss_pred eecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHHHHHhcCCCEEEEechh
Confidence 9999999999754 479999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHhhcc
Q 000452 1413 ASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYTQRS 1488 (1495)
Q Consensus 1413 sslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~~~~ 1488 (1495)
|+||.++|..+|++|.+..+++|||+|||||+||+.+|+|+|+|+|+|+|.|+|+||+++++|.|++|+++.....
T Consensus 633 SALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~gly~~Lv~~q~~~~ 708 (716)
T KOG0058|consen 633 SALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSKPNGLYAKLVQRQLDSG 708 (716)
T ss_pred hhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhCcccHHHHHHHHhcccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999876543
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.6e-84 Score=818.79 Aligned_cols=565 Identities=27% Similarity=0.366 Sum_probs=502.8
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 913 FSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLA 992 (1495)
Q Consensus 913 ~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~ 992 (1495)
+..++.++... +..+.-+++..++.+++.+++++...+..+..-.............+++++++...++.++|.+++.
T Consensus 142 ~~~f~~~~~~~--~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~ 219 (709)
T COG2274 142 LSWFIPLLFKY--RRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIA 219 (709)
T ss_pred hHhHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445444433 2233345556778889999999999877754321111122334455666777888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 993 TAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIV 1072 (1495)
Q Consensus 993 ~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v 1072 (1495)
..+.+....+-.++++++++.|++||+++++|++++|++ |++.|-..+...+...+..++.++..+++|++++|+++++
T Consensus 220 ~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li 298 (709)
T COG2274 220 HLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLI 298 (709)
T ss_pred HHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999996 7888888888888888888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 000452 1073 FIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEW 1152 (1495)
Q Consensus 1073 ~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1152 (1495)
.+..++++..+.-+..+..|+..+......+...++..|++.|+.|||+.+.|++|..++.+..+++.+..+.......|
T Consensus 299 ~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~ 378 (709)
T COG2274 299 VLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALI 378 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 88888888888778888888888888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCC
Q 000452 1153 LGFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPL 1231 (1495)
Q Consensus 1153 l~~rl~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~ 1231 (1495)
.+....++..+....++++ ...+..|.++.|..-...+.+..+.+++..++..+.+++....+.+|+.+.++.|+|.+.
T Consensus 379 ~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~ 458 (709)
T COG2274 379 LNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEG 458 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 8888888887776666665 344567889999988888888999999999999999999999999999999999988643
Q ss_pred ccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCE
Q 000452 1232 EIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGI 1311 (1495)
Q Consensus 1232 ~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1311 (1495)
+..+...|+.+|+|+|+||+|+|+++.|++|+|+|++|+|||+|||||+||||||||+++|.|+|+|++|+|.+||+
T Consensus 459 ---~~~~~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~ 535 (709)
T COG2274 459 ---DKTLIHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGV 535 (709)
T ss_pred ---ccccccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 22244566778999999999999999889999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 000452 1312 DISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1312 dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
|++++++++||++|+|||||++||+|||||||...+ +.+|||+++|++.++++|+|.++|.||||+|+|+|.|||||||
T Consensus 536 dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQr 615 (709)
T COG2274 536 DLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQR 615 (709)
T ss_pred eHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHH
Confidence 999999999999999999999999999999998654 6889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHh
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|||+|||||+++|+|||||||||+||++||+.|.+.|.+...+||+|+||||++|+++||||+|||+|+|+|+|+|+||+
T Consensus 616 QrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell 695 (709)
T COG2274 616 QRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELL 695 (709)
T ss_pred HHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChHHHHHHHH
Q 000452 1471 ENKSSSFSQLVAEY 1484 (1495)
Q Consensus 1471 ~~~~s~f~~lv~~~ 1484 (1495)
+. +|.|+++++..
T Consensus 696 ~~-~g~y~~l~~~q 708 (709)
T COG2274 696 AQ-GGLYARLYQQQ 708 (709)
T ss_pred Hh-cChHHHHHhcc
Confidence 87 79999998753
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.8e-80 Score=788.17 Aligned_cols=545 Identities=28% Similarity=0.379 Sum_probs=458.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000452 932 ILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIF 1011 (1495)
Q Consensus 932 ~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll 1011 (1495)
..++.++...+....++++.+..+... ........+...++++.++..++.+...++....+.+....++.+++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~ 96 (567)
T COG1132 19 AILLLLLSALLSLLLPLLIGRIIDALL--ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLL 96 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445556677777777775543211 011112334445555555667777777777788889999999999999999
Q ss_pred cCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1012 RAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSA 1091 (1495)
Q Consensus 1012 ~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~ 1091 (1495)
+.|+++|+++++|++++|+++|++.++..+......+...++.+++.+++++..+|.+.++++...+++.....++.+..
T Consensus 97 ~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~ 176 (567)
T COG1132 97 RLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKS 176 (567)
T ss_pred hCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888866666678888999999999999988887776666666666666666
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1092 RELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVF 1171 (1495)
Q Consensus 1092 r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~ 1171 (1495)
++..+......+.+.+.+.|+++|+++||+|+.++...+++.+..+...+...........+.....++..+.......+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (567)
T COG1132 177 RKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLAL 256 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888899999999999999999999999999887777776666665554444444444333334433333322222
Q ss_pred -HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEE
Q 000452 1172 -LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDL 1250 (1495)
Q Consensus 1172 -~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f 1250 (1495)
......+.++.|.....+.|...+...+..+...+..++....|.||+.++.+.+++... ... ..++..|+|+|
T Consensus 257 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~---~~~--~~~~~~~~I~f 331 (567)
T COG1132 257 GGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVED---PPD--PLKDTIGSIEF 331 (567)
T ss_pred HHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---CCC--CCCCCCCeEEE
Confidence 223445678899999999999999999999999999999999999999999987554221 111 13456788999
Q ss_pred eeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcc
Q 000452 1251 RDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQ 1330 (1495)
Q Consensus 1251 ~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQ 1330 (1495)
+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.|||+||+++++.+||++|++|||
T Consensus 332 ~~vsf~y~~~-~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Q 410 (567)
T COG1132 332 ENVSFSYPGK-KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQ 410 (567)
T ss_pred EEEEEEcCCC-CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcc
Confidence 9999999864 469999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCcHHHhcCCCCC-CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEE
Q 000452 1331 DPVMFEGTVRSNVDPLEE-YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLD 1409 (1495)
Q Consensus 1331 dp~LF~GTIR~NLdp~~~-~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLD 1409 (1495)
||+||+||||+||+++.+ ++|||+++|+++++++|+|.++|+||||.|||+|.+||||||||+|||||++|+|+|||||
T Consensus 411 d~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILD 490 (567)
T COG1132 411 DPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILD 490 (567)
T ss_pred cceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999999998864 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHh
Q 000452 1410 EATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYT 1485 (1495)
Q Consensus 1410 EaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~ 1485 (1495)
||||++|++||+.|++.+++..+++|+|+||||++|+.+||+|+|||+|+|+|+|+|+||+++ +|.|++|+++..
T Consensus 491 EaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~~~~ 565 (567)
T COG1132 491 EATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQAQG 565 (567)
T ss_pred ccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHHHhh
Confidence 999999999999999999988889999999999999999999999999999999999999986 799999998764
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.1e-78 Score=777.80 Aligned_cols=564 Identities=18% Similarity=0.221 Sum_probs=454.4
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCc-chhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 914 SVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRV-TGSMLLIVFVALAFGSSFCILARSTLLA 992 (1495)
Q Consensus 914 ~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~-~~~~~~~~y~~l~~~~~~~~~~~~~~~~ 992 (1495)
+.++.|++...+.. .+.+++.++..++.+..++.+.+..+......... ....++.+++++.++..++.+.+.++..
T Consensus 11 ~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK11174 11 RWLKQQSKPAKRWL--NLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGF 88 (588)
T ss_pred HHHHHHhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666543322 23334445666666777777665543211001111 1223344555566667778888888888
Q ss_pred HHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 993 TAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIV 1072 (1495)
Q Consensus 993 ~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v 1072 (1495)
..+.+....++.++++++++.|+++|+..++|++++|+++|++.++..+...+..++..++.+++.++++++++|++.++
T Consensus 89 ~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 168 (588)
T PRK11174 89 KAGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLI 168 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888899888888888899999999998877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 000452 1073 FIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEW 1152 (1495)
Q Consensus 1073 ~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1152 (1495)
++..+++..++..++.+..++..+......+.+.+++.|+++|+.+||+|++|+++.+++.+..++..+..........+
T Consensus 169 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (588)
T PRK11174 169 LLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFL 248 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666666666667777777777777788899999999999999999999999999999988888877766555444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Q 000452 1153 LGFRLDMLSNITFAFSLVFLISIPKGFIDPAIA---------GLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYT 1223 (1495)
Q Consensus 1153 l~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~ 1223 (1495)
......++..+...+++++......|.++.|.. -.++.+...+..++..+...+..+.....+.+|+.+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l 328 (588)
T PRK11174 249 SSAVLEFFASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFL 328 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444443332222211211111244444432 22234555566777888888889999999999999999
Q ss_pred cCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCc
Q 000452 1224 CIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAA 1303 (1495)
Q Consensus 1224 ~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~ 1303 (1495)
+.|++++.. ...+ ...+..+.|+|+||+|.|.++ +++|+|+||+|+|||++||||+||||||||+++|+|++ |++
T Consensus 329 ~~~~~~~~~--~~~~-~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~ 403 (588)
T PRK11174 329 ETPLAHPQQ--GEKE-LASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQ 403 (588)
T ss_pred cCCCcccCC--Cccc-cCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCC
Confidence 876543211 1101 111234679999999988655 56999999999999999999999999999999999999 999
Q ss_pred cEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCC
Q 000452 1304 GQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENG 1382 (1495)
Q Consensus 1304 G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G 1382 (1495)
|+|.+||+|+++++.+++|++|+||||||+||+|||||||... ++++|||+++|+++|+++++|+++|+||||.|||+|
T Consensus 404 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 404 GSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred cEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 9999999999999999999999999999999999999999876 469999999999999999999999999999999999
Q ss_pred CCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEE
Q 000452 1383 ENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEE 1462 (1495)
Q Consensus 1383 ~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE 1462 (1495)
.||||||||||+||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e 563 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQ 563 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEee
Confidence 99999999999999999999999999999999999999999999999989999999999999999999999999999999
Q ss_pred ecChhHHhhcCCChHHHHHHHHh
Q 000452 1463 YDSPRKLLENKSSSFSQLVAEYT 1485 (1495)
Q Consensus 1463 ~gsp~~Ll~~~~s~f~~lv~~~~ 1485 (1495)
.|+|+||+++ ++.|+++++...
T Consensus 564 ~G~~~eL~~~-~~~y~~l~~~q~ 585 (588)
T PRK11174 564 QGDYAELSQA-GGLFATLLAHRQ 585 (588)
T ss_pred cCCHHHHHhc-chHHHHHHHHhh
Confidence 9999999975 689999987643
No 13
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.2e-78 Score=788.49 Aligned_cols=556 Identities=22% Similarity=0.318 Sum_probs=462.6
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 915 VYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATA 994 (1495)
Q Consensus 915 ~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~ 994 (1495)
.+++|++.... .+...+++.++..+..++.++++....+..............+.+++++.++..++..++..+....
T Consensus 151 ~l~~~~~~~~~--~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 228 (711)
T TIGR00958 151 RLLGLSGRDWP--WLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYT 228 (711)
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555554322 2333444456667777778887775554221111111112234555566677778888899999999
Q ss_pred HHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 995 GYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFI 1074 (1495)
Q Consensus 995 ~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 1074 (1495)
+.+...+++.++++++++.|+.||+++++|+++||+++|++.++..+...+..++..++.+++.+++++..+|++.++++
T Consensus 229 ~~~~~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l 308 (711)
T TIGR00958 229 MARINLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTL 308 (711)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHH---HH
Q 000452 1075 PVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAA---ME 1151 (1495)
Q Consensus 1075 p~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~---~~ 1151 (1495)
..+++..++..++.+..++..+......+...+++.|+++|+.+||+|+.|+++.+++.+..++..+........ ..
T Consensus 309 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (711)
T TIGR00958 309 INLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYL 388 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666667777777777777777788888999999999999999999999999999988888776665443332 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCC
Q 000452 1152 WLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPL 1231 (1495)
Q Consensus 1152 wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~ 1231 (1495)
|....+..+..+.+... .......|.+++|.+..++.|...+...+..+...+.++++...+.+|+.++++.+++.+.
T Consensus 389 ~~~~~~~~~~~~~il~~--g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 466 (711)
T TIGR00958 389 WTTSVLGMLIQVLVLYY--GGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPL 466 (711)
T ss_pred HHHHHHHHHHHHHHHHH--HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 33322222222221111 1223447889999999999999999999999999999999999999999999987655432
Q ss_pred ccccCCCCCCCCCcceEEEeeeeEEeCCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcC
Q 000452 1232 EIEESRPNHSWPSHGKIDLRDLQVRYAPH-MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDG 1310 (1495)
Q Consensus 1232 ~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~-~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG 1310 (1495)
. .....++..|.|+|+||+|+|+.+ .+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||
T Consensus 467 ~----~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg 542 (711)
T TIGR00958 467 T----GTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDG 542 (711)
T ss_pred C----CCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECC
Confidence 1 111223557889999999999753 35799999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 000452 1311 IDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1311 ~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1389 (1495)
+|+++++.+++|++|+||||||++|+|||||||... ++.+|+++++|+++++++++++++|+|+||.+||+|.+|||||
T Consensus 543 ~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQ 622 (711)
T TIGR00958 543 VPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQ 622 (711)
T ss_pred EEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHH
Confidence 999999999999999999999999999999999855 5689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHH
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1390 rQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~L 1469 (1495)
|||++||||++++|+|||||||||+||++|++.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|+||
T Consensus 623 kQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL 700 (711)
T TIGR00958 623 KQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQL 700 (711)
T ss_pred HHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHH
Confidence 999999999999999999999999999999999999 344579999999999999999999999999999999999999
Q ss_pred hhcCCChHHHHH
Q 000452 1470 LENKSSSFSQLV 1481 (1495)
Q Consensus 1470 l~~~~s~f~~lv 1481 (1495)
+++ ++.|++|+
T Consensus 701 ~~~-~~~y~~lv 711 (711)
T TIGR00958 701 MED-QGCYKHLV 711 (711)
T ss_pred HhC-CCchHhcC
Confidence 976 58898874
No 14
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.3e-77 Score=779.40 Aligned_cols=544 Identities=21% Similarity=0.245 Sum_probs=462.5
Q ss_pred HHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 931 FILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCI 1010 (1495)
Q Consensus 931 ~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~l 1010 (1495)
.++++.++..++.++.++.+....+.............+..+++++.++..++.+++.++....+.+....++.++++++
T Consensus 140 ~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 219 (686)
T TIGR03797 140 AILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRL 219 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445666777777888777655532211111111222344556666677888889999999999999999999999999
Q ss_pred ccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1011 FRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISS 1090 (1495)
Q Consensus 1011 l~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~ 1090 (1495)
++.|++||++.++|++++|++ |.+.+...+...+...+..++..++.++++++++|+++++.+.++++++.+..++.+.
T Consensus 220 l~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~ 298 (686)
T TIGR03797 220 LRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLL 298 (686)
T ss_pred HcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999997 7888888888777777777777778888899999998887776666655555555555
Q ss_pred HHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1091 ARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLV 1170 (1495)
Q Consensus 1091 ~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~ 1170 (1495)
.+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..+.......|.......+..+...++.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 378 (686)
T TIGR03797 299 QVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFA 378 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666667778999999999999999999999999999999999988888888777777776666655444333333
Q ss_pred H-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEE
Q 000452 1171 F-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKID 1249 (1495)
Q Consensus 1171 ~-~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~ 1249 (1495)
+ ......|.++.|.+-.+.++...+..++..+...+.++.....+.+|+.++++.|+|.+.. ..+ ..+..|.|+
T Consensus 379 ~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~---~~~--~~~~~~~I~ 453 (686)
T TIGR03797 379 AAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA---KTD--PGKLSGAIE 453 (686)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC---cCC--CCCCCceEE
Confidence 3 2333578899998888888888899999999999999999999999999999877664311 111 123457899
Q ss_pred EeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEc
Q 000452 1250 LRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIP 1329 (1495)
Q Consensus 1250 f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIp 1329 (1495)
|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++|||
T Consensus 454 ~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~ 533 (686)
T TIGR03797 454 VDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVL 533 (686)
T ss_pred EEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEc
Confidence 99999999876678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEE
Q 000452 1330 QDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLD 1409 (1495)
Q Consensus 1330 Qdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLD 1409 (1495)
|||.+|+|||||||...+.++|+|+++|++.++++++++++|+|+||.++|+|.|||||||||++||||++++|+|||||
T Consensus 534 Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLD 613 (686)
T TIGR03797 534 QNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFD 613 (686)
T ss_pred cCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999977669999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHH
Q 000452 1410 EATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAE 1483 (1495)
Q Consensus 1410 EaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~ 1483 (1495)
||||+||++||+.|++.|++. ++|+|+||||++++.+||+|+|||+|+|+|.|+|++|+++ ++.|++|+++
T Consensus 614 EpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~-~~~y~~l~~~ 684 (686)
T TIGR03797 614 EATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR-EGLFAQLARR 684 (686)
T ss_pred CCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC-CcHHHHHHHh
Confidence 999999999999999999986 6899999999999999999999999999999999999975 6999999874
No 15
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.4e-77 Score=782.56 Aligned_cols=563 Identities=22% Similarity=0.302 Sum_probs=473.7
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 913 FSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLA 992 (1495)
Q Consensus 913 ~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~ 992 (1495)
++.++.+++...+. ...++++.++.+++.++.++.+....+.............+..+++++.++..++.+++.++..
T Consensus 142 ~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (710)
T TIGR03796 142 LRALWRRLRGSRGA--LLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLR 219 (710)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666654322 2334444566677777778877765542211111111223344555566677788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 993 TAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIV 1072 (1495)
Q Consensus 993 ~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v 1072 (1495)
..+.+....++.++++++++.|++||++.++|++++|++.| +.+...+...+..++..++.+++.++++++++|+++++
T Consensus 220 ~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 298 (710)
T TIGR03796 220 RLQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLI 298 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 56787788788888888888888999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 000452 1073 FIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEW 1152 (1495)
Q Consensus 1073 ~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1152 (1495)
.+..++++.++..++.+..++..+......+...+++.|+++|+.+||+++.|+.+.+++.+..++..+..........|
T Consensus 299 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (710)
T TIGR03796 299 GIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQI 378 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777777777777777777777777788889999999999999999999999999999998888888777776666666
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCC
Q 000452 1153 LGFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPL 1231 (1495)
Q Consensus 1153 l~~rl~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~ 1231 (1495)
.......+..+...++.++ ......|.++.|.+..++++...+...+..+...+.++.....+.+|+.++++.|+|.+.
T Consensus 379 ~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 458 (710)
T TIGR03796 379 LGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLL 458 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccc
Confidence 6665555554433333332 233457889999998899999999999999999999999999999999999988776532
Q ss_pred cccc--C-CCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEE
Q 000452 1232 EIEE--S-RPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILI 1308 (1495)
Q Consensus 1232 ~~~~--~-~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~I 1308 (1495)
.... . ...+.++..|.|+|+||+|+|+++.+++|+|+||+|+|||+|||||+||||||||+++|+|+++|++|+|.+
T Consensus 459 ~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~i 538 (710)
T TIGR03796 459 EEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILF 538 (710)
T ss_pred ccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 2100 0 011113456899999999999876677999999999999999999999999999999999999999999999
Q ss_pred cCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCc
Q 000452 1309 DGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSM 1387 (1495)
Q Consensus 1309 DG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~ 1387 (1495)
||+|+++++.+++|++++||||||++|+|||||||..++ +++|+++++|++.+++++++.++|+|+||.++|+|.||||
T Consensus 539 dg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSG 618 (710)
T TIGR03796 539 DGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSG 618 (710)
T ss_pred CCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCH
Confidence 999999999999999999999999999999999998764 6899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChh
Q 000452 1388 GQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPR 1467 (1495)
Q Consensus 1388 GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~ 1467 (1495)
||||||+||||++++|+|||||||||+||++||+.|.+.|++ .++|+|+||||++++.+||||+|||+|+|+|.|+|+
T Consensus 619 GQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~ 696 (710)
T TIGR03796 619 GQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHE 696 (710)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHH
Confidence 999999999999999999999999999999999999999987 489999999999999999999999999999999999
Q ss_pred HHhhcCCChHHHHH
Q 000452 1468 KLLENKSSSFSQLV 1481 (1495)
Q Consensus 1468 ~Ll~~~~s~f~~lv 1481 (1495)
+|+++ ++.|++|+
T Consensus 697 ~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 697 ELWAV-GGAYARLI 709 (710)
T ss_pred HHHHc-CCcHHHHh
Confidence 99975 68899986
No 16
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.2e-77 Score=779.97 Aligned_cols=560 Identities=22% Similarity=0.277 Sum_probs=464.5
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 913 FSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVT-GSMLLIVFVALAFGSSFCILARSTLL 991 (1495)
Q Consensus 913 ~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~-~~~~~~~y~~l~~~~~~~~~~~~~~~ 991 (1495)
++.++.|++...+. +..++++.++..++.++.++++....+..... .... ...+..+++++.++..++.+++.++.
T Consensus 144 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (708)
T TIGR01193 144 LLKFIPLITRQKKL--IVNIVIAAIIVTLISIAGSYYLQKIIDTYIPH-KMMGTLGIISIGLIIAYIIQQILSYIQIFLL 220 (708)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666654332 23344455667777888888888665432111 1111 12233344555566777888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 992 ATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFI 1071 (1495)
Q Consensus 992 ~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1495)
...+.+....++.++++++++.|+.||+++++|++++|++ |.+.+...+...+..++..++.+++.++++++++|++++
T Consensus 221 ~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 299 (708)
T TIGR01193 221 NVLGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFL 299 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999999999999999999998 788777777666666667777777777888889999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 000452 1072 VFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAME 1151 (1495)
Q Consensus 1072 v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1151 (1495)
+++..++++..+...+.+..++..+......+...+++.|+++|+.|||+|+.|+++.+++.+..+...+..+.......
T Consensus 300 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (708)
T TIGR01193 300 LSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQ 379 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77766666666667777777888888888889999999999999999999999999999998888877776666554444
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCC
Q 000452 1152 WLGFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPP 1230 (1495)
Q Consensus 1152 wl~~rl~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~ 1230 (1495)
+......++..+...+++++ ......|.++.|.+..+.++...+...+..+...+.+++....+++|+.++++.|+|.+
T Consensus 380 ~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 459 (708)
T TIGR01193 380 GQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFI 459 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 43333333332222222211 23334788999999888999999999999999999999999999999999998887653
Q ss_pred CccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcC
Q 000452 1231 LEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDG 1310 (1495)
Q Consensus 1231 ~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG 1310 (1495)
... .....++..|.|+|+||+|+|+++ +++|+|+||+|+|||+|||||+||||||||+++|+|+++|++|+|+|||
T Consensus 460 ~~~---~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg 535 (708)
T TIGR01193 460 NKK---KRTELNNLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNG 535 (708)
T ss_pred ccc---cccCCCCCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECC
Confidence 211 111234457899999999999744 5699999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCC--CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 000452 1311 IDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL--EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1388 (1495)
Q Consensus 1311 ~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~--~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~G 1388 (1495)
+|+++++.+++|++|+||||||+||+|||||||... .+++|+++++|++.+++++++.++|+||||.++|+|.+||||
T Consensus 536 ~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgG 615 (708)
T TIGR01193 536 FSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGG 615 (708)
T ss_pred EEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHH
Confidence 999999999999999999999999999999999875 468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhH
Q 000452 1389 QRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1389 QrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~ 1468 (1495)
||||++||||++++|+|||||||||+||++|++.|++.|++. +++|+|+||||++++..||+|+||++|+++|.|+|++
T Consensus 616 QrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~ 694 (708)
T TIGR01193 616 QKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDE 694 (708)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999999974 7899999999999999999999999999999999999
Q ss_pred HhhcCCChHHHHHH
Q 000452 1469 LLENKSSSFSQLVA 1482 (1495)
Q Consensus 1469 Ll~~~~s~f~~lv~ 1482 (1495)
|+++ +|.|++|++
T Consensus 695 L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 695 LLDR-NGFYASLIH 707 (708)
T ss_pred HHhc-CCcHHHHhh
Confidence 9975 689999875
No 17
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.5e-76 Score=758.23 Aligned_cols=546 Identities=24% Similarity=0.346 Sum_probs=452.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 932 ILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGS---MLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHY 1008 (1495)
Q Consensus 932 ~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~---~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~ 1008 (1495)
.+++.++..++.++.++++.+..+...... ..... .++.+++++.++..++.+.+.++....+.+...+++.++++
T Consensus 28 ~~~~~~~~~~~~~~~p~~~~~iid~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~ 106 (592)
T PRK10790 28 AVLMLWVAAAAEVSGPLLISYFIDNMVAKG-NLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMD 106 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344456667777777887776554211101 11111 12233444455666677788888888999999999999999
Q ss_pred HHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1009 CIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYI 1088 (1495)
Q Consensus 1009 ~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~ 1088 (1495)
+++++|+++|+..+.|++++|+++|++.++..+...+..++..++.+++.++++++.+|++.++++..+++.+.+...+.
T Consensus 107 ~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~ 186 (592)
T PRK10790 107 AALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQ 186 (592)
T ss_pred HHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888888899999999887665544444444444445
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 000452 1089 SSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWL-GFRLDMLSNITFAF 1167 (1495)
Q Consensus 1089 ~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl-~~rl~~l~~~~~~~ 1167 (1495)
+..+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..+.......+. .....++..+...+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (592)
T PRK10790 187 RYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCG 266 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556666666677888999999999999999999999999999888777666555444333332 22233333322222
Q ss_pred HHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcce
Q 000452 1168 SLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGK 1247 (1495)
Q Consensus 1168 ~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~ 1247 (1495)
+.++......|.++.|.+..++.|...+..++..+...+.++++...+.+|+.++++.+++++.. ...++..+.
T Consensus 267 ~~~~~~~~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~------~~~~~~~~~ 340 (592)
T PRK10790 267 LLMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGN------DDRPLQSGR 340 (592)
T ss_pred HHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCC------CccCCCCCe
Confidence 11111123578899999999999999999999999999999999999999999999866543211 112334578
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++.+++|++|+|
T Consensus 341 i~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~ 419 (592)
T PRK10790 341 IDIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAM 419 (592)
T ss_pred EEEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEE
Confidence 9999999999754 569999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEE
Q 000452 1328 IPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILM 1407 (1495)
Q Consensus 1328 IpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILi 1407 (1495)
|||||.+|+||||+||.++++++|+++++|+++++++++++++|+||||.++|+|.|||||||||++|||||+++|+|||
T Consensus 420 v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~ill 499 (592)
T PRK10790 420 VQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILI 499 (592)
T ss_pred EccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEE
Confidence 99999999999999999888899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHhh
Q 000452 1408 LDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYTQ 1486 (1495)
Q Consensus 1408 LDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~~ 1486 (1495)
||||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|++|+++ ++.|++|+++...
T Consensus 500 lDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~-~~~y~~l~~~~~~ 577 (592)
T PRK10790 500 LDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAA-QGRYWQMYQLQLA 577 (592)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhC-CCHHHHHHHHHhh
Confidence 99999999999999999999999889999999999999999999999999999999999999976 5999999986644
No 18
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=6.9e-76 Score=751.57 Aligned_cols=544 Identities=21% Similarity=0.287 Sum_probs=463.2
Q ss_pred HHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000452 935 AQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAP 1014 (1495)
Q Consensus 935 ~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap 1014 (1495)
+.++..+...+.+++++...+.............+...++++.++..++.+++.++....+.+....++..+++++++.|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~~ 112 (582)
T PRK11176 33 ALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGMP 112 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33444445555666666443321111110011122233444566677777888888888899999999999999999999
Q ss_pred cccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1015 MSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSAREL 1094 (1495)
Q Consensus 1015 ~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l 1094 (1495)
..+|++...|++++|+++|++.+...+...+..++..++.+++.++++++.+|+++++++..+++.+++..++.+..++.
T Consensus 113 ~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~ 192 (582)
T PRK11176 113 VSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRNI 192 (582)
T ss_pred HHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988899999999999999999999999988877766666666666666666777
Q ss_pred HHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 000452 1095 SRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVF-LI 1173 (1495)
Q Consensus 1095 ~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~-~~ 1173 (1495)
.+......+...+++.|.++|+.+||+|+.|+++.+++.+..+...+..........|.....+.++.+...+++.+ ..
T Consensus 193 ~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~ 272 (582)
T PRK11176 193 SKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASF 272 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777788899999999999999999999999999999999999888888777777777776666665444333332 23
Q ss_pred HhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeee
Q 000452 1174 SIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDL 1253 (1495)
Q Consensus 1174 ~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv 1253 (1495)
....|.+++|.+.+++++...+...+..+...+..++....+.+|+.++++.++|.+.. . ....|..+.|+|+||
T Consensus 273 ~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~---~--~~~~~~~~~i~~~~v 347 (582)
T PRK11176 273 PSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEG---K--RVIERAKGDIEFRNV 347 (582)
T ss_pred HHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCC---C--cCCCCCCCeEEEEEE
Confidence 34568899999999999999999999999999999999999999999999877653311 1 111234568999999
Q ss_pred eEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCc
Q 000452 1254 QVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPV 1333 (1495)
Q Consensus 1254 ~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~ 1333 (1495)
+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++|+||||||+
T Consensus 348 sf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~ 427 (582)
T PRK11176 348 TFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQNVH 427 (582)
T ss_pred EEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEccCce
Confidence 99998766779999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHhcCCC--CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcC
Q 000452 1334 MFEGTVRSNVDPL--EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEA 1411 (1495)
Q Consensus 1334 LF~GTIR~NLdp~--~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEa 1411 (1495)
+|+||||+||... ++++|+|+++++++++++++++++|+||||.+||+|.+||||||||++|||||+++|+|||||||
T Consensus 428 lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ililDEp 507 (582)
T PRK11176 428 LFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEA 507 (582)
T ss_pred eecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEEECc
Confidence 9999999999854 35899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHH
Q 000452 1412 TASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEY 1484 (1495)
Q Consensus 1412 TsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~ 1484 (1495)
||+||++|++.|.+.|++..+++|+|+||||++++.+||+|++|++|+|+|.|+|++|+++ ++.|++|+++.
T Consensus 508 tsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~-~~~y~~l~~~~ 579 (582)
T PRK11176 508 TSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQ-NGVYAQLHKMQ 579 (582)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhC-CChHHHHHHHH
Confidence 9999999999999999998889999999999999999999999999999999999999976 58999998764
No 19
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=4.9e-76 Score=765.63 Aligned_cols=553 Identities=22% Similarity=0.276 Sum_probs=460.7
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 913 FSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLA 992 (1495)
Q Consensus 913 ~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~ 992 (1495)
++.++.+++...+ .+..++++.++.+++.++.++.++...+.............+..+++++.++..++.+++.++..
T Consensus 135 ~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (694)
T TIGR03375 135 KHWFWSTLKESWP--LYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLD 212 (694)
T ss_pred chHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445666654332 23334445566777778888887765542211111011122333444455667788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 993 TAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIV 1072 (1495)
Q Consensus 993 ~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v 1072 (1495)
..+.+....++..+++++++.|++| ++.++|++++|+ +|++.+...+...+...+..++.+++.++++++++|+++++
T Consensus 213 ~~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 290 (694)
T TIGR03375 213 VAGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999998 789999999999 79999999888887777777777878888889999998887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHH
Q 000452 1073 FIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEW 1152 (1495)
Q Consensus 1073 ~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1152 (1495)
.+..+++++.+..++.+..++..+......+...+++.|+++|+.+||+|+.|+.+.+++.+..++..+..+.......+
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666666666666677777777777788889999999999999999999999999999999888887777766665555
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCC
Q 000452 1153 LGFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPL 1231 (1495)
Q Consensus 1153 l~~rl~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~ 1231 (1495)
......++..+...++.++ ......|.++.|.+-.++++...+...+..+...+.+++....+.+|+.++++.|+|.+.
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 5444444443332222222 233447889999988889999999999999999999999999999999999988776432
Q ss_pred ccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCE
Q 000452 1232 EIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGI 1311 (1495)
Q Consensus 1232 ~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1311 (1495)
.. ......+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+
T Consensus 451 ~~---~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~ 527 (694)
T TIGR03375 451 GT---RFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGV 527 (694)
T ss_pred CC---CCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 11 111112346789999999999866667999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 000452 1312 DISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1312 dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
|+++++++++|++++||||||++|+|||||||...+ +++|+|+++|++++++++++.++|+|+||.++|+|.|||||||
T Consensus 528 ~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQr 607 (694)
T TIGR03375 528 DIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQR 607 (694)
T ss_pred EhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHH
Confidence 999999999999999999999999999999998765 5899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHh
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|+||++|+++|.|+|+||+
T Consensus 608 QRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl 687 (694)
T TIGR03375 608 QAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVL 687 (694)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHH
Confidence 99999999999999999999999999999999999999998999999999999999999999999999999999999998
Q ss_pred hc
Q 000452 1471 EN 1472 (1495)
Q Consensus 1471 ~~ 1472 (1495)
++
T Consensus 688 ~~ 689 (694)
T TIGR03375 688 EA 689 (694)
T ss_pred HH
Confidence 65
No 20
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.3e-75 Score=741.78 Aligned_cols=560 Identities=19% Similarity=0.232 Sum_probs=452.9
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCC-CCCC---CcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 915 VYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASK-DIKP---RVTGSMLLIVFVALAFGSSFCILARSTL 990 (1495)
Q Consensus 915 ~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~-~~~~---~~~~~~~~~~y~~l~~~~~~~~~~~~~~ 990 (1495)
.+++|++...+. +.+.+++.++..++.++.++.+.|..+... ...+ ..........+.++.++..++.++..++
T Consensus 6 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (574)
T PRK11160 6 PFLKLYKRHWFM--LSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLV 83 (574)
T ss_pred HHHHHHhhhhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555543322 223333445556666666766666554210 0110 0001111223444556667777778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 991 LATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVF 1070 (1495)
Q Consensus 991 ~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1495)
....+.+....++.++++++++.|+.+|++.++|++++|+++|++.++..+...+..++..++.+++.++++++.+|++.
T Consensus 84 ~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (574)
T PRK11160 84 SHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLA 163 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHH
Q 000452 1071 IVFIPVIATC-IWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAA 1149 (1495)
Q Consensus 1071 ~v~ip~~~~~-~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~ 1149 (1495)
++++..+++. ..+..++.+..+...+......+.+.+.+.|+++|+.+||+|+.|+++.+++.+..+++.+........
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
T PRK11160 164 LTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANL 243 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7664444333 334455666667777777788889999999999999999999999999999999998888877776666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCC
Q 000452 1150 MEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYG-LTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSE 1228 (1495)
Q Consensus 1150 ~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~-~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E 1228 (1495)
..+.....+++..+..+.+..+......|.++.|....++.|. +.....+..+...+..+.....|.+|+.++++.|+|
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~g~~~~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~ 323 (574)
T PRK11160 244 TGLSQALMILANGLTVVLMLWLAAGGVGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPE 323 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 6666555555554443333333222235666776655555554 333445566677788888899999999999987665
Q ss_pred CCCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEE
Q 000452 1229 PPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILI 1308 (1495)
Q Consensus 1229 ~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~I 1308 (1495)
.+.. ...+ ..+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|.+
T Consensus 324 ~~~~--~~~~--~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i 399 (574)
T PRK11160 324 VTFP--TTST--AAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILL 399 (574)
T ss_pred CCCC--cccC--CCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEE
Confidence 3211 0111 11345789999999999765557999999999999999999999999999999999999999999999
Q ss_pred cCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCc
Q 000452 1309 DGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSM 1387 (1495)
Q Consensus 1309 DG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~ 1387 (1495)
||+|+++++.+++|++|++|||||++|+|||||||... .+.+|+++++|++++++++++.+ |+||||.+||+|.+|||
T Consensus 400 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSg 478 (574)
T PRK11160 400 NGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSG 478 (574)
T ss_pred CCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCH
Confidence 99999999999999999999999999999999999865 46899999999999999999999 99999999999999999
Q ss_pred hHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChh
Q 000452 1388 GQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPR 1467 (1495)
Q Consensus 1388 GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~ 1467 (1495)
|||||++||||++++|+|||||||||++|++|++.|++.|++..+++|+|+||||++++.+||+|++|++|+++|.|+|+
T Consensus 479 GqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~ 558 (574)
T PRK11160 479 GEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQ 558 (574)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred HHhhcCCChHHHHHH
Q 000452 1468 KLLENKSSSFSQLVA 1482 (1495)
Q Consensus 1468 ~Ll~~~~s~f~~lv~ 1482 (1495)
||+++ ++.|++|++
T Consensus 559 ~l~~~-~g~y~~l~~ 572 (574)
T PRK11160 559 ELLAQ-QGRYYQLKQ 572 (574)
T ss_pred HHHhc-CcHHHHHHh
Confidence 99975 689999986
No 21
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.9e-74 Score=737.45 Aligned_cols=547 Identities=23% Similarity=0.319 Sum_probs=475.4
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000452 932 ILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIF 1011 (1495)
Q Consensus 932 ~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll 1011 (1495)
.+++.++..++....+++++...+.............+...++++.++..++.+++.++....+.+....++..++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~ 98 (571)
T TIGR02203 19 AGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLL 98 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344555666666677665433211111111112223445667777778888899999999999999999999999999
Q ss_pred cCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1012 RAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSA 1091 (1495)
Q Consensus 1012 ~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~ 1091 (1495)
+.|.++|++.+.|++++|+++|++.++..+...+..++..++.+++.++++++++|+++++++..+++..++..++.+..
T Consensus 99 ~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~ 178 (571)
T TIGR02203 99 GLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRL 178 (571)
T ss_pred cCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888888888888888888
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1092 RELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVF 1171 (1495)
Q Consensus 1092 r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~ 1171 (1495)
++..+......++..+.+.|+++|+.+||+++.++++.+++.+..+...+..........+.....+++..+...+.+++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (571)
T TIGR02203 179 RRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFI 258 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888999999999999999999999999999999999999999888887777777777666666655443333332
Q ss_pred -HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEE
Q 000452 1172 -LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDL 1250 (1495)
Q Consensus 1172 -~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f 1250 (1495)
......|.+++|.+..++++...+..++..+...+.++.....+.+|+.++.+.++|.+.. ..+.. +..+.|++
T Consensus 259 g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~~--~~~~~i~~ 333 (571)
T TIGR02203 259 ALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG---TRAIE--RARGDVEF 333 (571)
T ss_pred HHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCCCC--CCCCeEEE
Confidence 2334578899999999999999999999999999999999999999999999876654321 11111 23568999
Q ss_pred eeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcc
Q 000452 1251 RDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQ 1330 (1495)
Q Consensus 1251 ~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQ 1330 (1495)
+||+|+|+++.+++|+|+||+|++||+|+|+|+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++++|+||
T Consensus 334 ~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 413 (571)
T TIGR02203 334 RNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQ 413 (571)
T ss_pred EEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEcc
Confidence 99999998765679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCcHHHhcCCCC--CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEE
Q 000452 1331 DPVMFEGTVRSNVDPLE--EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILML 1408 (1495)
Q Consensus 1331 dp~LF~GTIR~NLdp~~--~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiL 1408 (1495)
||++|+||||+||..+. +++|++++++++++++++++.++|+||||.++|+|.+||||||||+|||||++++|+||+|
T Consensus 414 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illL 493 (571)
T TIGR02203 414 DVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILIL 493 (571)
T ss_pred CcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999998663 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHH
Q 000452 1409 DEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEY 1484 (1495)
Q Consensus 1409 DEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~ 1484 (1495)
|||||+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++++++ ++.|++++.+.
T Consensus 494 DEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~-~~~~~~~~~~~ 568 (571)
T TIGR02203 494 DEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLAR-NGLYAQLHNMQ 568 (571)
T ss_pred eCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHc-CCHHHHHHHHh
Confidence 9999999999999999999999899999999999999999999999999999999999999976 58999987754
No 22
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.4e-74 Score=747.82 Aligned_cols=564 Identities=23% Similarity=0.293 Sum_probs=471.2
Q ss_pred hHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 912 EFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLL 991 (1495)
Q Consensus 912 ~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~ 991 (1495)
+++.++.+++...+. +..++++.++..++.++.++.+....+.............+..+++++.++..++.+++.++.
T Consensus 126 ~~~~~~~~~~~~~~~--~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~ 203 (694)
T TIGR01846 126 GFSWFIPAIIRYRKQ--FREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLF 203 (694)
T ss_pred cHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566666543322 223344456666777778887776554221111111122334455666667788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 992 ATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFI 1071 (1495)
Q Consensus 992 ~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1495)
...+.+....++.++++++++.|+.||++.++|++++|+ +|++.+...+...+..++..++.+++.++++++++|++++
T Consensus 204 ~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 282 (694)
T TIGR01846 204 AHLTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTG 282 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 6999999988877777777777677778888999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 000452 1072 VFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAME 1151 (1495)
Q Consensus 1072 v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1151 (1495)
+++..++++..+..+..+..+...+......+...+++.|+++|+.+||+|+.|+.+.+++.+..+...+..+.......
T Consensus 283 i~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (694)
T TIGR01846 283 VVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGN 362 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666666655555555555555555666778889999999999999999999999999999999988888877777777
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCC
Q 000452 1152 WLGFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPP 1230 (1495)
Q Consensus 1152 wl~~rl~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~ 1230 (1495)
+......++..+..++..++ ......|.++.|.+..+.++...+..++..+...+.+++....+.+|+.++++.|+|.+
T Consensus 363 ~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 442 (694)
T TIGR01846 363 IAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPR 442 (694)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 76666666655444333333 23344788999998888899999999999999999999999999999999998877643
Q ss_pred CccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcC
Q 000452 1231 LEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDG 1310 (1495)
Q Consensus 1231 ~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG 1310 (1495)
.. ...+. -+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|.|||
T Consensus 443 ~~--~~~~~--~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg 518 (694)
T TIGR01846 443 SA--GLAAL--PELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDG 518 (694)
T ss_pred CC--CCCCC--CCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 21 11111 123578999999999987767799999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 000452 1311 IDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1311 ~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1389 (1495)
+|+++++.+++|++++||||||.+|+|||||||... .+++|+++++|++++++++++.++|+||||.++|+|.||||||
T Consensus 519 ~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq 598 (694)
T TIGR01846 519 VDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQ 598 (694)
T ss_pred EehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHH
Confidence 999999999999999999999999999999999865 4789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHH
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1390 rQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~L 1469 (1495)
|||++||||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++++..||+|++|++|+|+|.|+|++|
T Consensus 599 ~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l 678 (694)
T TIGR01846 599 RQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEEL 678 (694)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred hhcCCChHHHHHHH
Q 000452 1470 LENKSSSFSQLVAE 1483 (1495)
Q Consensus 1470 l~~~~s~f~~lv~~ 1483 (1495)
+++ ++.|++|+++
T Consensus 679 ~~~-~~~y~~l~~~ 691 (694)
T TIGR01846 679 LAL-QGLYARLWQQ 691 (694)
T ss_pred HHc-CChHHHHHHh
Confidence 985 5999999875
No 23
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.1e-74 Score=680.80 Aligned_cols=513 Identities=23% Similarity=0.301 Sum_probs=444.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHH
Q 000452 966 GSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALI 1045 (1495)
Q Consensus 966 ~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l 1045 (1495)
...++..++++.++..++.+.+..+....+.++...++.++++++.+.+..+-...|+|.+.+.++.-++.++..+...+
T Consensus 39 l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryL 118 (559)
T COG4988 39 LLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYL 118 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 34456666677777788888888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhh
Q 000452 1046 GSFAFSIIRVLGVIGVMSLVAWQVFIV---FIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSF 1122 (1495)
Q Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~~~~v---~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf 1122 (1495)
..++.+.+..+.+++.+++.+|...++ ..|++++++++. ...++...+....+...+.+||-+.++|+.|+|+|
T Consensus 119 Pq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilv---g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f 195 (559)
T COG4988 119 PQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILV---GLAAKDASEKQFSALARLSGHFLDRLRGLETLRAF 195 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHh
Confidence 999999999999999999999986654 456666665543 33445555566677788999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcC-CCCCHHHHHHHHHHHHHHHHHHH
Q 000452 1123 DQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLIS-IPK-GFIDPAIAGLAVTYGLTLNNLQA 1200 (1495)
Q Consensus 1123 ~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~-~~~-~~~~~~~~gl~l~~~~~l~~~~~ 1200 (1495)
+..+...++..+...++.+..+......---+..+|++..+.++.++++... +.. |.++-...-+++..+--+..++.
T Consensus 196 ~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR 275 (559)
T COG4988 196 GRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLR 275 (559)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHH
Confidence 9999999999999998888888777776666778888888877776666432 333 55665555556666666777777
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEE
Q 000452 1201 MLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGI 1280 (1495)
Q Consensus 1201 ~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgI 1280 (1495)
.+...+..-.+...+.+.+..+.+.|.+.+...+ .....|....+|+.+|++++|+++. ++++|+||+++||+++||
T Consensus 276 ~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~--~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~tal 352 (559)
T COG4988 276 DLGSFFHAAAAGEAAADKLFTLLESPVATPGSGE--KAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQLTAL 352 (559)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcc--ccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcEEEE
Confidence 7877888777788889999999987766443211 1123343445677779999998765 799999999999999999
Q ss_pred EcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCCC-CCCHHHHHHHHH
Q 000452 1281 VGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALD 1359 (1495)
Q Consensus 1281 VGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~-~~sd~ei~~aL~ 1359 (1495)
||+||||||||+++|+|+.+|++|+|.+||+|..+++.+++|+++++|||+|++|+|||||||...+ +.+||||++|++
T Consensus 353 vG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~ 432 (559)
T COG4988 353 VGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALD 432 (559)
T ss_pred ECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998765 589999999999
Q ss_pred HcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEE
Q 000452 1360 KCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITI 1439 (1495)
Q Consensus 1360 ~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~I 1439 (1495)
++++.++++. |+||||.+||+|.+|||||+|||+||||++++++++++|||||+||.|||+.|++.|.+.++++|||+|
T Consensus 433 ~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~i 511 (559)
T COG4988 433 QAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVI 511 (559)
T ss_pred HhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEE
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHhh
Q 000452 1440 AHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYTQ 1486 (1495)
Q Consensus 1440 AHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~~ 1486 (1495)
|||++.+.++|+|+|||+|+++|.|+|++|.++ ++.|++|+++...
T Consensus 512 tHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q~~ 557 (559)
T COG4988 512 THRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQEG 557 (559)
T ss_pred EcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHHhc
Confidence 999999999999999999999999999999975 6899999987543
No 24
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-75 Score=740.12 Aligned_cols=514 Identities=23% Similarity=0.314 Sum_probs=433.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHH
Q 000452 966 GSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALI 1045 (1495)
Q Consensus 966 ~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l 1045 (1495)
...+.+.|+.++++..++.++....+.+.|.|...+++.+.++++||.+++|||++..|++..|+++|++.+.+.+...+
T Consensus 70 ~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKv 149 (1228)
T KOG0055|consen 70 VSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKV 149 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHH
Confidence 44567778888888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccH
Q 000452 1046 GSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQE 1125 (1495)
Q Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e 1125 (1495)
..++..+..+++.+++.++..|+++++.+++.++.......+.+..-.+...+....+..-+...|++.+++|+.||+.|
T Consensus 150 g~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq 229 (1228)
T KOG0055|consen 150 GNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGE 229 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCc
Confidence 99999999999999999999999999988887777766666666666666666777778888999999999999999999
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH-HHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 000452 1126 SRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNIT---FAFSLVFL-ISIPKGFIDPAIAGLAVTYGLTLNNLQAM 1201 (1495)
Q Consensus 1126 ~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~---~~~~~~~~-~~~~~~~~~~~~~gl~l~~~~~l~~~~~~ 1201 (1495)
++..+++.+.++...+....... |.++-....-.++ .+...++. ..+..+..++|.+..++.+.+.-...+..
T Consensus 230 ~~e~~ry~~~L~~~~k~gi~~g~---~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgq 306 (1228)
T KOG0055|consen 230 KKEIERYSKALENALKFGIKKGL---FKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQ 306 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhc
Confidence 99999999988877766544322 2222222221111 11222222 22234456666554444444444444444
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCCC-CcceeeeeEEeeCCcEEEE
Q 000452 1202 LIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHM-PFVLRGISCTFPGEKKTGI 1280 (1495)
Q Consensus 1202 ~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~-~~vL~~Is~~I~~GekvgI 1280 (1495)
..-.+..+.+...|..+|.+.++..++-....+..++ .--.+|.|||+||+|+|+... .++|+|+||+|++||.||+
T Consensus 307 a~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~--~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~val 384 (1228)
T KOG0055|consen 307 ASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRV--LSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVAL 384 (1228)
T ss_pred cccchHHHhccccchHHHHHHhcCCCCCCcccccCCc--ccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEE
Confidence 4555666777888999999987644332111111111 122479999999999997543 3699999999999999999
Q ss_pred EcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCCC-CCCHHHHHHHHH
Q 000452 1281 VGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALD 1359 (1495)
Q Consensus 1281 VGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~-~~sd~ei~~aL~ 1359 (1495)
||+|||||||++++|.|+|+|++|+|+|||.||.+++.++||++||+|.|||+||++||+|||.... +.|++|+.+|++
T Consensus 385 VG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k 464 (1228)
T KOG0055|consen 385 VGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAK 464 (1228)
T ss_pred ECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998765 799999999999
Q ss_pred HcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEE
Q 000452 1360 KCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITI 1439 (1495)
Q Consensus 1360 ~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~I 1439 (1495)
.++.++||.++|+|+||.|||+|..||||||||+||||||+|+|+||+||||||+||+++|+.+|++|++..+++|.|+|
T Consensus 465 ~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivV 544 (1228)
T KOG0055|consen 465 AANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVV 544 (1228)
T ss_pred HccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHh
Q 000452 1440 AHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYT 1485 (1495)
Q Consensus 1440 AHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~ 1485 (1495)
||||+||+++|+|+||++|+|+|.|+|+||++++ |.|++||+...
T Consensus 545 aHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q~ 589 (1228)
T KOG0055|consen 545 AHRLSTIRNADKIAVMEEGKIVEQGTHDELIALG-GIYSSLVRLQE 589 (1228)
T ss_pred eeehhhhhccCEEEEEECCEEEEecCHHHHHhcc-chHHHHHHHHh
Confidence 9999999999999999999999999999999986 99999997654
No 25
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.9e-73 Score=720.50 Aligned_cols=507 Identities=22% Similarity=0.276 Sum_probs=416.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 932 ILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSML--LIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYC 1009 (1495)
Q Consensus 932 ~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~--~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ 1009 (1495)
.+++.++..++.++.++.+++..+..... .. ....+ +..++++.++..++.+++.++....+.+...+++.+++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ 95 (529)
T TIGR02868 18 AILLGALALGSAVALLGVSAWLISRAAEM-PP-VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDR 95 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444556666777777777665422111 11 11111 1112234455566677777788888899999999999999
Q ss_pred HccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 000452 1010 IFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIW-YQQYYI 1088 (1495)
Q Consensus 1010 ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~-~~~~y~ 1088 (1495)
+++.|.+||++.++|++++|+++|++.++..+...+..++..++.+++.++++++.+|++.++++..++++.+ ...++.
T Consensus 96 ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~ 175 (529)
T TIGR02868 96 LARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSL 175 (529)
T ss_pred hhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998877655444433 334445
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1089 SSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFS 1168 (1495)
Q Consensus 1089 ~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~ 1168 (1495)
+..+...+......+.+.+++.|+++|+++||+|+.|+++.+++.+..+...+..........+......++..+...++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (529)
T TIGR02868 176 RAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGA 255 (529)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566666667778999999999999999999999999999999998888877776665555554444444443333322
Q ss_pred HHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcce
Q 000452 1169 LVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGK 1247 (1495)
Q Consensus 1169 ~~~-~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~ 1247 (1495)
.++ ......|.++.|.+...+.|...+...+..+...+.++.....+.+|+.++++.++|.+... ...+...+|..+.
T Consensus 256 ~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~~~~~~~~~~~~~ 334 (529)
T TIGR02868 256 LWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGV-VPAAGALGLGKPT 334 (529)
T ss_pred HHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCC-CCCCcccCCCCce
Confidence 222 22345678899998888899989999999999999999999999999999998776533211 1111123445678
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+|+||+|+|+++. ++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|++++ .+++|++++|
T Consensus 335 I~~~~vsf~Y~~~~-~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~ 412 (529)
T TIGR02868 335 LELRDLSFGYPGSP-PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISV 412 (529)
T ss_pred EEEEEEEEecCCCC-ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEE
Confidence 99999999997654 599999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred EcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeE
Q 000452 1328 IPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKIL 1406 (1495)
Q Consensus 1328 IpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~IL 1406 (1495)
|||||+||+|||||||... ++++|||+++|+++|+++|+|.++|+||||.|||+|.|||||||||+|||||++++|+||
T Consensus 413 V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~il 492 (529)
T TIGR02868 413 FAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPIL 492 (529)
T ss_pred EccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999975 478999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCc
Q 000452 1407 MLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRI 1443 (1495)
Q Consensus 1407 iLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl 1443 (1495)
|||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 493 iLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 493 LLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999998999999999996
No 26
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.9e-72 Score=719.35 Aligned_cols=565 Identities=21% Similarity=0.283 Sum_probs=466.5
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 914 SVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLAT 993 (1495)
Q Consensus 914 ~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~ 993 (1495)
+.++.|++...+.. .+.+++.++..++.++.++.+....+..-..........++.+++++.++..++.+.+.++...
T Consensus 7 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (576)
T TIGR02204 7 AALWPFVRPYRGRV--LAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTW 84 (576)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555655433222 2333345566677777777666544321100111112223444555555666677788888888
Q ss_pred HHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 994 AGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVF 1073 (1495)
Q Consensus 994 ~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 1073 (1495)
.+.+....++..+++++++.|.++|+....|++++|+++|++.++..+...+..++..++.+++.+++++.++|++.+++
T Consensus 85 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (576)
T TIGR02204 85 LGERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLV 164 (576)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888888888899999999999999999988776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 000452 1074 IPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWL 1153 (1495)
Q Consensus 1074 ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1153 (1495)
+..+++.+.+..++.+..+...+.....++...+++.|.++|+.+||+|+.|+.+.+++.+..+...+..........|+
T Consensus 165 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 165 LLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555555566666677777777778888899999999999999999999999999999998888777766665555555
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCc
Q 000452 1154 GFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLE 1232 (1495)
Q Consensus 1154 ~~rl~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~ 1232 (1495)
......+..+..++...+ ......|.++.|.+..+..|...+...+..+...+.++.+...+.+|+.++++.++|.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 554444433222222222 2234578899999999999999999999999999999999999999999999876553211
Q ss_pred cccCCCCCCCCCcceEEEeeeeEEeCCCC-CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCE
Q 000452 1233 IEESRPNHSWPSHGKIDLRDLQVRYAPHM-PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGI 1311 (1495)
Q Consensus 1233 ~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~-~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1311 (1495)
. ...+..+|..+.|+|+||+|+|+++. +++|+|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|.+||+
T Consensus 325 ~--~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~ 402 (576)
T TIGR02204 325 A--HPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGV 402 (576)
T ss_pred C--CCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCE
Confidence 1 11112234457899999999997543 57999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 000452 1312 DISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1312 dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
|+++++.+++|++++|+||||++|+|||||||.+. ++.+|++++++++++++.+++.++|+|+||+++|+|.+||||||
T Consensus 403 ~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~ 482 (576)
T TIGR02204 403 DLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQR 482 (576)
T ss_pred EHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHH
Confidence 99999999999999999999999999999999864 46789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHh
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
||++||||++++|+|||||||||++|.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|+
T Consensus 483 Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~ 562 (576)
T TIGR02204 483 QRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELI 562 (576)
T ss_pred HHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHH
Confidence 99999999999999999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred hcCCChHHHHHHH
Q 000452 1471 ENKSSSFSQLVAE 1483 (1495)
Q Consensus 1471 ~~~~s~f~~lv~~ 1483 (1495)
+ +++.|++|++.
T Consensus 563 ~-~~~~~~~l~~~ 574 (576)
T TIGR02204 563 A-KGGLYARLARL 574 (576)
T ss_pred H-cCChHHHHHhh
Confidence 7 46899998864
No 27
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.7e-72 Score=717.92 Aligned_cols=549 Identities=19% Similarity=0.264 Sum_probs=453.9
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 929 VPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHY 1008 (1495)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~ 1008 (1495)
+.+++++.++..++.++.++++.+..+... +......++..++++.++..+..+....+......+....+..++++
T Consensus 21 ~~~~~~~~i~~~~~~~~~~~~~~~iid~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 97 (588)
T PRK13657 21 GILLAVANVLLAAATFAEPILFGRIIDAIS---GKGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFE 97 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555567777788888888876654321 11122223334444444444444444444455556666667779999
Q ss_pred HHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1009 CIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYI 1088 (1495)
Q Consensus 1009 ~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~ 1088 (1495)
++++.|..+|++.+.|++++|+++|++.+...+...+..++..++..++.+++++..+|+++++++.+++++..+..++.
T Consensus 98 ~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~ 177 (588)
T PRK13657 98 RIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVM 177 (588)
T ss_pred HHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888777777777777778888888889999988887777777777788888
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1089 SSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFS 1168 (1495)
Q Consensus 1089 ~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~ 1168 (1495)
+..++..+......+...+++.|+++|+.+||+|+.++.+.+++.+..+...+..........+.....+++..+...++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (588)
T PRK13657 178 RKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAI 257 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888889999999999999999999999999999999888888777666555544454444444333332222
Q ss_pred HHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCC-CCcc
Q 000452 1169 LVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSW-PSHG 1246 (1495)
Q Consensus 1169 ~~~-~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~w-p~~g 1246 (1495)
.++ ......|.+++|.+..++.+...+...+..+...+..+.....+.+|+.++.+.+++.+.. + ..+ .+ +..+
T Consensus 258 ~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~-~-~~~--~~~~~~~ 333 (588)
T PRK13657 258 LVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP-P-GAI--DLGRVKG 333 (588)
T ss_pred HHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-C-CCC--CcCCCCC
Confidence 222 2334578899999988999998898888899998999999999999999998765432211 1 111 11 2346
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||.|+++++.+++|++|+
T Consensus 334 ~I~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~ 412 (588)
T PRK13657 334 AVEFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIA 412 (588)
T ss_pred eEEEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheE
Confidence 89999999999744 56999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCe
Q 000452 1327 IIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKI 1405 (1495)
Q Consensus 1327 iIpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~I 1405 (1495)
|+||||.+|+||||+||... ++.+|++++++++++++++++.++|+|+||.++|+|.+||||||||+|||||++++|+|
T Consensus 413 ~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~i 492 (588)
T PRK13657 413 VVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPI 492 (588)
T ss_pred EEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999865 46899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHh
Q 000452 1406 LMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYT 1485 (1495)
Q Consensus 1406 LiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~ 1485 (1495)
||||||||+||++|++.|.+.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ ++.|++|+++..
T Consensus 493 liLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~ 571 (588)
T PRK13657 493 LILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRFAALLRAQG 571 (588)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChHHHHHHHhh
Confidence 9999999999999999999999998889999999999999999999999999999999999999975 689999998664
Q ss_pred h
Q 000452 1486 Q 1486 (1495)
Q Consensus 1486 ~ 1486 (1495)
.
T Consensus 572 ~ 572 (588)
T PRK13657 572 M 572 (588)
T ss_pred c
Confidence 3
No 28
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-75 Score=658.74 Aligned_cols=535 Identities=20% Similarity=0.329 Sum_probs=426.1
Q ss_pred HHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000452 940 QILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAF------GSSFCILARSTLLATAGYKTATLLFNKMHYCIFRA 1013 (1495)
Q Consensus 940 ~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~------~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~a 1013 (1495)
.+....-+...+|..+... .|..........|+.+.+ ++.++.-+|+++......-+.+.+-.++++|+...
T Consensus 228 rli~~~~pi~~k~iv~~lt--ap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~L 305 (790)
T KOG0056|consen 228 RLINVSLPILSKWIVDELT--APDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRHLHNL 305 (790)
T ss_pred HHHhhhhHHhHHHHHHhhc--CcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhh
Confidence 3444444555554443211 222223333444554443 34567777888887888888999999999999999
Q ss_pred CcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH----HHHHH
Q 000452 1014 PMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMS-LVAWQVFIVFIPVIATCIWY----QQYYI 1088 (1495)
Q Consensus 1014 p~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~v~ip~~~~~~~~----~~~y~ 1088 (1495)
.++|.-...+|+++.-+.+-.+.+. .+...+.+..-.++.+...++..+ ..+||+.+++..++.+|... ..+-.
T Consensus 306 SlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRT 384 (790)
T KOG0056|consen 306 SLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRT 384 (790)
T ss_pred ceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhH
Confidence 9999999999998888877776665 444433344444444443333332 35677777666666555432 33333
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1089 SSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFS 1168 (1495)
Q Consensus 1089 ~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~ 1168 (1495)
+..|.+...+.+++ +.-.+++-...|+|-|++|+...+++.+.++.+++..+........+...-+.+..+.....
T Consensus 385 k~rR~Mn~~~nesr----Ar~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~g 460 (790)
T KOG0056|consen 385 KARRKMNNSWNESR----ARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAG 460 (790)
T ss_pred HHHHHhhhhhhhhh----hhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhh
Confidence 33344433333333 44568889999999999999999999999999999888776666555554444433322222
Q ss_pred HH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcce
Q 000452 1169 LV-FLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGK 1247 (1495)
Q Consensus 1169 ~~-~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~ 1247 (1495)
.+ ....+..+..+.|-.-+..+|.+++.++++|+-..+-.++++.+-.||+.+.++.++|-. +....++---.+|.
T Consensus 461 sll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVv---d~P~a~pl~~~~G~ 537 (790)
T KOG0056|consen 461 SLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVV---DLPGAPPLKVTQGK 537 (790)
T ss_pred hheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhh---cCCCCCCccccCCe
Confidence 22 222233567788888899999999999999999999999999999999999987555432 21112222235799
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+|+||+|.|+|+.| ||+||||+++||+.||+|||||+||||++++|||+++.++|+|.|||+||+++..+.||+.||+
T Consensus 538 i~fsnvtF~Y~p~k~-vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGV 616 (790)
T KOG0056|consen 538 IEFSNVTFAYDPGKP-VLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGV 616 (790)
T ss_pred EEEEEeEEecCCCCc-eeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCc
Confidence 999999999999865 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccCcCCCCcHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeE
Q 000452 1328 IPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKIL 1406 (1495)
Q Consensus 1328 IpQdp~LF~GTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~IL 1406 (1495)
||||.+||+.||-+||.... .++|||+.+|.+.++++|.|...|+|++|.|||+|-.||||||||+++||++||+|.|+
T Consensus 617 VPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iI 696 (790)
T KOG0056|consen 617 VPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSII 696 (790)
T ss_pred ccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEE
Confidence 99999999999999998654 79999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHh
Q 000452 1407 MLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYT 1485 (1495)
Q Consensus 1407 iLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~ 1485 (1495)
+||||||+||..||+.||.++.+..+++|.|+||||++||.++|.|+|+++|+|+|.|+|+||+++++|.|++|++...
T Consensus 697 lLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~qq 775 (790)
T KOG0056|consen 697 LLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQAQQ 775 (790)
T ss_pred EEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998999999996443
No 29
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-72 Score=656.44 Aligned_cols=495 Identities=20% Similarity=0.286 Sum_probs=424.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHH
Q 000452 981 SFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIG 1060 (1495)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~ 1060 (1495)
.+..++-.+......++.-.+++.++++++...+..-...-..|+++||+..|++.+|..+-..+...+..+....+..+
T Consensus 72 t~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i 151 (573)
T COG4987 72 TAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTI 151 (573)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHH
Confidence 33333434444566778888999999999999888888999999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHh
Q 000452 1061 VMSLVAWQVFIVFI-PVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGY 1139 (1495)
Q Consensus 1061 ~~~~~~~~~~~v~i-p~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~ 1139 (1495)
.+++.+|++++.+. .++++.+.+.-.+.+..|...+--...++.+.++|.|.+.|....+.||.+++|.+.+....+..
T Consensus 152 ~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~ 231 (573)
T COG4987 152 GLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASW 231 (573)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHH
Confidence 88888988876544 34444555666677777888787888899999999999999999999999999999999999999
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHH
Q 000452 1140 SRPTFHVAAAMEWLGFRLDMLSNITFAFS-LVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLI-WLACQMENKIISVE 1217 (1495)
Q Consensus 1140 ~~~~~~~~~~~~wl~~rl~~l~~~~~~~~-~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~-~~~~~le~~~~sve 1217 (1495)
.+..........|-.+.+.++..+.++.. ++.......|..+...+.+++.-.+.....+..+. ..+.++....-|.+
T Consensus 232 ~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~ 311 (573)
T COG4987 232 LKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASAR 311 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHH
Confidence 99999999999999999999888776633 33333345555553333333333233333333333 56678888899999
Q ss_pred HHHHHhcCCCCCCCccccCCCCCCCCCcc-eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHh
Q 000452 1218 RIFQYTCIPSEPPLEIEESRPNHSWPSHG-KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLF 1296 (1495)
Q Consensus 1218 Ri~~~~~~~~E~~~~~~~~~~~~~wp~~g-~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~ 1296 (1495)
|+.+..+.++|..... +.-|..+ .++++||+|+|+.+.++||+|+||++++||||||+||||||||||+++|.
T Consensus 312 Rl~~i~~q~~e~~~~~------~~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~ 385 (573)
T COG4987 312 RLNDILDQKPEVTFPD------EQTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLA 385 (573)
T ss_pred HHhhhccCCcccCCCc------cccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHH
Confidence 9999887766654321 1112222 79999999999998889999999999999999999999999999999999
Q ss_pred ccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcc
Q 000452 1297 RIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLD 1375 (1495)
Q Consensus 1297 rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLd 1375 (1495)
|.++|++|+|..+|.+++.++.+++|+.|++++|.+++|+||+|+||... .+.||||+|+||++++|.+.+++.|+||+
T Consensus 386 ~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~ 465 (573)
T COG4987 386 GAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLN 465 (573)
T ss_pred hccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhh
Confidence 99999999999999999999999999999999999999999999999743 47999999999999999999999999999
Q ss_pred cccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEE
Q 000452 1376 SKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLL 1455 (1495)
Q Consensus 1376 t~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL 1455 (1495)
|.+||+|.+||||||||++|||+||++.++++|||||.+||++||+.|.+.|.+..+|+|+|+||||+.-+..||||+||
T Consensus 466 t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl 545 (573)
T COG4987 466 TWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVL 545 (573)
T ss_pred chhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCcEEEEecChhHHhhcCCChHHHHHH
Q 000452 1456 SHGLIEEYDSPRKLLENKSSSFSQLVA 1482 (1495)
Q Consensus 1456 ~~G~ivE~gsp~~Ll~~~~s~f~~lv~ 1482 (1495)
|+|+++|+|+|++|+++ +|.|++|.+
T Consensus 546 ~~Gkiie~G~~~~Ll~~-~g~~~~l~q 571 (573)
T COG4987 546 DNGKIIEEGTHAELLAN-NGRYKRLYQ 571 (573)
T ss_pred ECCeeeecCCHHhhhcc-ccHHHHHhc
Confidence 99999999999999984 799999865
No 30
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=6.5e-71 Score=701.96 Aligned_cols=561 Identities=20% Similarity=0.270 Sum_probs=453.2
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 916 YWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAG 995 (1495)
Q Consensus 916 y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~ 995 (1495)
+++|++...+ .+.+.+++.++..++.++.++.+++..+.... ......++..++++.++..+..+.+..+....+
T Consensus 10 l~~~l~~~k~--~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (585)
T TIGR01192 10 ALSYLNVHKN--RVLLIVIANITLAAITIAEPILFGRIIDAISS---KSDVLPTLALWAGFGVFNTIAYVLVAREADRLA 84 (585)
T ss_pred HHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455554322 22334444566677777788877765542211 111112222223333333444444444455556
Q ss_pred HHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 996 YKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIP 1075 (1495)
Q Consensus 996 ~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip 1075 (1495)
.+....++.++++++++.|++||+++++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.++++++.
T Consensus 85 ~~~~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~ 164 (585)
T TIGR01192 85 HGRRATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMV 164 (585)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666777799999999999999999999999999999999998888888888888888888888899999999988887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHH
Q 000452 1076 VIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGF 1155 (1495)
Q Consensus 1076 ~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~ 1155 (1495)
+++++.++..++.+..++..+......+...+++.|+++|+.+||+|+.|+.+.+++.+..+...+..+.......+...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (585)
T TIGR01192 165 LGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASG 244 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777778888888888888888888899999999999999999999999999999888887766665544333333322
Q ss_pred HHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccc
Q 000452 1156 RLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIE 1234 (1495)
Q Consensus 1156 rl~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~ 1234 (1495)
...++..+...++.++ ......|.++.|.+..++.|...+...+..+...+.++.....+.+|+.+..+.+++.+..
T Consensus 245 ~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~-- 322 (585)
T TIGR01192 245 LNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEP-- 322 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC--
Confidence 2233332222222222 2234578899999888888988888888888889999999999999999998765442211
Q ss_pred cCCCCCCCC-CcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeC
Q 000452 1235 ESRPNHSWP-SHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDI 1313 (1495)
Q Consensus 1235 ~~~~~~~wp-~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI 1313 (1495)
..+ ..++ ..+.|+++||+|+|+++ .++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||+|+
T Consensus 323 -~~~-~~~~~~~~~i~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~ 399 (585)
T TIGR01192 323 -ADA-PELPNVKGAVEFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDI 399 (585)
T ss_pred -ccC-CCCCCCCCeEEEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEh
Confidence 111 1122 35689999999999754 3589999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHhcccEEEcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 000452 1314 SLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1314 ~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
.+++.+++|++++++||||.+|+||||+||... .+.+|+|++++++.+++++++.++|+|+||.++|+|.+||||||||
T Consensus 400 ~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qr 479 (585)
T TIGR01192 400 NTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQR 479 (585)
T ss_pred hhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHH
Confidence 999999999999999999999999999999865 4689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
++|||||+++|+|||||||||+||.+|++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++++++
T Consensus 480 l~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 559 (585)
T TIGR01192 480 LAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQK 559 (585)
T ss_pred HHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHC
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999975
Q ss_pred CCChHHHHHHHHhhc
Q 000452 1473 KSSSFSQLVAEYTQR 1487 (1495)
Q Consensus 1473 ~~s~f~~lv~~~~~~ 1487 (1495)
++.|+++++.....
T Consensus 560 -~~~y~~l~~~~~~~ 573 (585)
T TIGR01192 560 -DGRFYKLLRRSGLL 573 (585)
T ss_pred -CChHHHHHHhCccc
Confidence 68999999877654
No 31
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.4e-71 Score=704.94 Aligned_cols=511 Identities=21% Similarity=0.255 Sum_probs=430.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHH
Q 000452 969 LLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSF 1048 (1495)
Q Consensus 969 ~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~ 1048 (1495)
++.+++++.++..++.+++.++....+.+...+++.++++++++.|+++|++.++|++++|+++|++.+...+...+..+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~ 117 (569)
T PRK10789 38 WIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTL 117 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 34445555556666677777777788899999999999999999999999999999999999999999987777777777
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHH
Q 000452 1049 AFSIIRVLGVIGVM-SLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESR 1127 (1495)
Q Consensus 1049 ~~~~~~~~~~~~~~-~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~ 1127 (1495)
+..++..++.++++ ++++|+++++++..+++..++...+.+..++..+......+.+.+++.|+++|+.+||+|+.|++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~ 197 (569)
T PRK10789 118 VDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR 197 (569)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHH
Confidence 77766655555555 47889887776666666666666666666666666777788999999999999999999999999
Q ss_pred HHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1128 FIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLA 1206 (1495)
Q Consensus 1128 f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~ 1206 (1495)
+.+++.+..+...+..+.......+..........+...+...+ ......|.++.|.+..++.|...+..++..+...+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~ 277 (569)
T PRK10789 198 QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMF 277 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988887776666554444443333333222222221111 22344788899998888888888888888889999
Q ss_pred HHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCC
Q 000452 1207 CQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGS 1286 (1495)
Q Consensus 1207 ~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGS 1286 (1495)
.++.....+.+|+.++.+.++|.+.. ....+ +..|.|+++||+|+|+.+.+++|+|+||+|+|||++||||+|||
T Consensus 278 ~~~~~~~~a~~ri~~ll~~~~~~~~~--~~~~~---~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGs 352 (569)
T PRK10789 278 NIVERGSAAYSRIRAMLAEAPVVKDG--SEPVP---EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTGS 352 (569)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccCC--CCCCC---CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCCC
Confidence 99999999999999999876543211 11111 23568999999999986556799999999999999999999999
Q ss_pred CHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcH
Q 000452 1287 GKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGD 1365 (1495)
Q Consensus 1287 GKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~ 1365 (1495)
|||||+++|+|+++|++|+|.+||+|+++++.+++|++++++||+|++|+||||+||... .+++|++++++++.+++++
T Consensus 353 GKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~ 432 (569)
T PRK10789 353 GKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHD 432 (569)
T ss_pred CHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHH
Confidence 999999999999999999999999999999999999999999999999999999999865 4689999999999999999
Q ss_pred HHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchh
Q 000452 1366 EVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITS 1445 (1495)
Q Consensus 1366 ~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~t 1445 (1495)
++.++|+|+||.++|+|.+||||||||++||||++++|+|||||||||+||+++++.|.+.|++..+++|+|+||||+++
T Consensus 433 ~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~ 512 (569)
T PRK10789 433 DILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSA 512 (569)
T ss_pred HHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhH
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred hhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHh
Q 000452 1446 VIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYT 1485 (1495)
Q Consensus 1446 i~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~ 1485 (1495)
+..||+|++|++|+++|.|+|++|+++ ++.|++|++...
T Consensus 513 ~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~ 551 (569)
T PRK10789 513 LTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQ 551 (569)
T ss_pred HHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhh
Confidence 999999999999999999999999975 589999987543
No 32
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=8.1e-71 Score=696.62 Aligned_cols=518 Identities=20% Similarity=0.261 Sum_probs=430.4
Q ss_pred HHHHHHHHHHHHhhHHHHHhhcccCCCCCCCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000452 933 LLAQTLFQILQIASNYWIAWATPASKDIKPRV-TGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIF 1011 (1495)
Q Consensus 933 ~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~-~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll 1011 (1495)
+++.++..++.++.++.+++..+......... ....++..++++.++..++.+++.++....+.+...+++.+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~ 88 (529)
T TIGR02857 9 GLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVA 88 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566666777777766654321011111 12234455666667777888888999999999999999999999999
Q ss_pred cCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1012 RAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSA 1091 (1495)
Q Consensus 1012 ~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~ 1091 (1495)
+.|..+|++.++|++++|+++|++.++..+...+..++..++.+++.+++++..+|+++++++..+++..++...+.+..
T Consensus 89 ~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~~ 168 (529)
T TIGR02857 89 ALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWAA 168 (529)
T ss_pred hCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888888888888888888999999877766555544444444455555
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 000452 1092 RELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSL-V 1170 (1495)
Q Consensus 1092 r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~-~ 1170 (1495)
+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..........+......++..+...++. +
T Consensus 169 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (529)
T TIGR02857 169 QAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVY 248 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566666777889999999999999999999999999999888887777666666566665555555544333221 2
Q ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEE
Q 000452 1171 FLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDL 1250 (1495)
Q Consensus 1171 ~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f 1250 (1495)
.......|.++.|....++.|+..+...+..+...+..+.....+.+|+.++++.+++... . .+...+..+.|+|
T Consensus 249 ~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~----~-~~~~~~~~~~i~~ 323 (529)
T TIGR02857 249 IGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG----K-APVTAAPAPSLEF 323 (529)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC----C-cCCCCCCCCeEEE
Confidence 2222336788998888888888888888888889999999999999999999975533221 1 1111233468999
Q ss_pred eeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcc
Q 000452 1251 RDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQ 1330 (1495)
Q Consensus 1251 ~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQ 1330 (1495)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++||||
T Consensus 324 ~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~Q 403 (529)
T TIGR02857 324 SGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVPQ 403 (529)
T ss_pred EEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEcC
Confidence 99999998665579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEE
Q 000452 1331 DPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLD 1409 (1495)
Q Consensus 1331 dp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLD 1409 (1495)
||.+|+|||||||... ++++|+++++|+++++++++++++|+||||.++|+|.+||||||||++||||++++|+|+|||
T Consensus 404 ~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ililD 483 (529)
T TIGR02857 404 HPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLLD 483 (529)
T ss_pred CCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999999999999865 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEE
Q 000452 1410 EATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLL 1455 (1495)
Q Consensus 1410 EaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL 1455 (1495)
||||+||++|++.|++.|++..+++|+|+||||++++..||+|+||
T Consensus 484 E~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 484 EPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999988899999999999999999999986
No 33
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.5e-70 Score=696.89 Aligned_cols=546 Identities=21% Similarity=0.246 Sum_probs=433.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 290 KLIKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQL 369 (1495)
Q Consensus 290 ~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 369 (1495)
+.++.+.+.+++.+++..++.++..++..+.|++++.+++.+..++......+.+++++++..++..++.....+...+.
T Consensus 11 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (588)
T PRK11174 11 RWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKA 90 (588)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556678888889999999999999999999999999997642211112223344455556666777777777788889
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 370 GIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIASVAAF 448 (1495)
Q Consensus 370 g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl 448 (1495)
+.++...+...+|+|.++++....+++++|+++|++++|++++.+++. .+..++...+..++++++++..-...+++.+
T Consensus 91 ~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l 170 (588)
T PRK11174 91 GQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILL 170 (588)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998764 5566666666666555555433333334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHH----HHHHHHHHHHHHHHHHHH
Q 000452 449 FGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKT----IDLRKSESGWLKRCLYTS 524 (1495)
Q Consensus 449 ~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i----~~~R~~E~~~l~~~~~~~ 524 (1495)
+++.+...+...+.+..++.+++.++..++..+.+.|.++|+++||.|+||+.+.+++ ++.|+.+.+..+......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (588)
T PRK11174 171 GTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSS 250 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444455667788888889999999999999999999999999999999887776 444555554444333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 525 SITSFVFWCAPTFVSVITFGTCILLKVPLES---------GKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASF 595 (1495)
Q Consensus 525 ~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~---------~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~f 595 (1495)
....++.. .+.+ .++.++.+.+.| .++. ..++.++.+...+..|+..++..+..+.+++++.+||.++
T Consensus 251 ~~~~~~~~-~~~~-~~~~~~~~~~~g-~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~ 327 (588)
T PRK11174 251 AVLEFFAS-ISIA-LVAVYFGFSYLG-ELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTF 327 (588)
T ss_pred HHHHHHHH-HHHH-HHHHHHHHHHhc-ccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222221 1211 122233333333 3443 3455556677788899999999999999999999999999
Q ss_pred hcCCCCCcccccCCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCc
Q 000452 596 FCLDELQPDLVEKQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISG 675 (1495)
Q Consensus 596 L~~~e~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G 675 (1495)
++.++.++..............|+++|++|.|.. ++++|+|+||++++|+++||+||||||||||+++|+|++ |++|
T Consensus 328 l~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G 404 (588)
T PRK11174 328 LETPLAHPQQGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQG 404 (588)
T ss_pred HcCCCcccCCCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCc
Confidence 9876533211110001112235999999987752 367999999999999999999999999999999999999 8999
Q ss_pred EEEEcC-------------eEEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCC
Q 000452 676 TLKLCG-------------TKAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGI 741 (1495)
Q Consensus 676 ~v~~~g-------------~~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~ 741 (1495)
+|.++| .++||||+|++|++||+|||.+|++ .++++++++++.|+++++++.+|+|++|.+||+|.
T Consensus 405 ~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~ 484 (588)
T PRK11174 405 SLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAA 484 (588)
T ss_pred EEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCC
Confidence 999998 4799999999999999999999965 89999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEE
Q 000452 742 NLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQ 821 (1495)
Q Consensus 742 ~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~ 821 (1495)
+|||||||||+||||+++||+|+||||||||||+++++++.+ .+....+++|+|+|||+++.+..||+|++|++|++++
T Consensus 485 ~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~-~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e 563 (588)
T PRK11174 485 GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQ-ALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQ 563 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHH-HHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEee
Confidence 999999999999999999999999999999999999999975 5666678999999999999999999999999999999
Q ss_pred ecChHHHHhcCCchhHHHHHH
Q 000452 822 AGKYTDVINSGTDFMELVDAH 842 (1495)
Q Consensus 822 ~g~~~~l~~~~~~~~~l~~~~ 842 (1495)
.|+++|++++++.|.+++..+
T Consensus 564 ~G~~~eL~~~~~~y~~l~~~q 584 (588)
T PRK11174 564 QGDYAELSQAGGLFATLLAHR 584 (588)
T ss_pred cCCHHHHHhcchHHHHHHHHh
Confidence 999999999888888877554
No 34
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.9e-71 Score=643.28 Aligned_cols=506 Identities=23% Similarity=0.349 Sum_probs=398.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHH
Q 000452 967 SMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIG 1046 (1495)
Q Consensus 967 ~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~ 1046 (1495)
...+..|.+..+++.+|..++.+.++....++-+....+.+++.++..+++|.+..+|.+-+++..-...+...+...+.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~ 153 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVF 153 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999998877777766666665555555
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHh
Q 000452 1047 SFAFSIIRVLGVIGVMSL-VAWQVFIVFIPVIATCIW----YQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRS 1121 (1495)
Q Consensus 1047 ~~~~~~~~~~~~~~~~~~-~~~~~~~v~ip~~~~~~~----~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRa 1121 (1495)
.++..++.+......+.+ ..+.+.++++..+..|.. +.++=-+ .++....+........-|++..-.+||+
T Consensus 154 ~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~----fR~~~N~Adn~as~~~~dsL~Nye~VKs 229 (591)
T KOG0057|consen 154 NIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNR----FRKAMNNADNSASRRAYDSLINYEIVKS 229 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHH----HHHHHHhhhhHHHHHHHHHHhhHHHHHH
Confidence 544444443333322222 223333333333333321 1222111 2222233344455566789999999999
Q ss_pred hccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 000452 1122 FDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLI-SIPKGFIDPAIAGLAVTYGLTLNNLQA 1200 (1495)
Q Consensus 1122 f~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~-~~~~~~~~~~~~gl~l~~~~~l~~~~~ 1200 (1495)
|+.|++..+++...+.++.+...........+.+--..+.+....+...+.. ....+.++.+-.-+..+...++...+.
T Consensus 230 fNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~ 309 (591)
T KOG0057|consen 230 FNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLN 309 (591)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHH
Confidence 9999999999999998888877766665555554444443332222222211 123445666666677777778888888
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEE
Q 000452 1201 MLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGI 1280 (1495)
Q Consensus 1201 ~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgI 1280 (1495)
.+-..++++-..+.-.+-+....+.... +.+. +++.-+..|.|+|+||+|.|.|+ ++||+|+||+|++||||||
T Consensus 310 ~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~----i~~~-~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekVaI 383 (591)
T KOG0057|consen 310 FLGSVYRELRQALTDMRTLFILLEVDED----IQEA-ALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKVAI 383 (591)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhhhhhh----hhhc-cCCcccCCCcEEEEeeEEEeCCC-CceecceeEEecCCCEEEE
Confidence 8888888777776666555443221110 1111 11222345789999999999876 4599999999999999999
Q ss_pred EcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCCC-CCCHHHHHHHHH
Q 000452 1281 VGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALD 1359 (1495)
Q Consensus 1281 VGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~-~~sd~ei~~aL~ 1359 (1495)
||++||||||++++|+|+++ .+|+|+|||+||+++.++.+|+.||+||||..||++||-+||...+ ..+|||+.++++
T Consensus 384 vG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k 462 (591)
T KOG0057|consen 384 VGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACK 462 (591)
T ss_pred ECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHH
Confidence 99999999999999999999 9999999999999999999999999999999999999999997654 799999999999
Q ss_pred HcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEE
Q 000452 1360 KCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITI 1439 (1495)
Q Consensus 1360 ~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~I 1439 (1495)
+++++|.+.++|+|++|.|||+|..||||||||++||||+||+|+|+++|||||+||.+||+.|.+.|+...+++|+|+|
T Consensus 463 ~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~I 542 (591)
T KOG0057|consen 463 RAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMI 542 (591)
T ss_pred HcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998999999999
Q ss_pred ecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHH
Q 000452 1440 AHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEY 1484 (1495)
Q Consensus 1440 AHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~ 1484 (1495)
+||++++++||+|+|||+|+|+|+|+|+||++ +++.|+.++...
T Consensus 543 vH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~ 586 (591)
T KOG0057|consen 543 VHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQ 586 (591)
T ss_pred EecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhccc
Confidence 99999999999999999999999999999998 778888887643
No 35
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2e-68 Score=675.85 Aligned_cols=527 Identities=17% Similarity=0.149 Sum_probs=425.5
Q ss_pred HHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000452 933 LLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFR 1012 (1495)
Q Consensus 933 ~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ 1012 (1495)
+++.++..++.++.++.+....+.............++.+++++.++..++.+++.++....+.+....++.++++++++
T Consensus 12 ~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~ 91 (544)
T TIGR01842 12 GLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASFS 91 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34445666677777777775554221111111122344455556666778888888889999999999999999999999
Q ss_pred CCcccccccccccchhHHhcchhHHHhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1013 APMSFFDATPSGRIINRASTDQSAVDLSIPA-LIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSA 1091 (1495)
Q Consensus 1013 ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~ 1091 (1495)
.|+. ..|..++++++|++.+...+.. .+..++..++.++ .++++++.+|++.++++..+++.+.+..++.+..
T Consensus 92 ~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~~ 165 (544)
T TIGR01842 92 ATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVGLALLNNRAT 165 (544)
T ss_pred Cccc-----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 9984 2367789999999999987766 4444444444444 3466788888887765544444444555555555
Q ss_pred HHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1092 RELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVF 1171 (1495)
Q Consensus 1092 r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~ 1171 (1495)
+...+......+...+++.|+++|+++||+|+.|+.+.+++.+..++..+..........+......++..+...++..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (544)
T TIGR01842 166 KKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGL 245 (544)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666667788889999999999999999999999999999888887776665544444433333333333222222222
Q ss_pred -HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEE
Q 000452 1172 -LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDL 1250 (1495)
Q Consensus 1172 -~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f 1250 (1495)
......|.+++|.+..++.|...+...+..+...+..+.....+.+|+.++.+.++|.+.. ...+ +..+.|++
T Consensus 246 g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~---~~~~~i~~ 319 (544)
T TIGR01842 246 GAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA---MPLP---EPEGHLSV 319 (544)
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC---CCCC---CCCCeEEE
Confidence 2334478899999988999999999999999999999999999999999999876553211 1111 23468999
Q ss_pred eeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcc
Q 000452 1251 RDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQ 1330 (1495)
Q Consensus 1251 ~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQ 1330 (1495)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|++++|+||
T Consensus 320 ~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q 399 (544)
T TIGR01842 320 ENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQ 399 (544)
T ss_pred EEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEecC
Confidence 99999997655679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCcHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEE
Q 000452 1331 DPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLD 1409 (1495)
Q Consensus 1331 dp~LF~GTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLD 1409 (1495)
||++|+||+|+|+..++ +++|++++++++.++++++++++|+|+||.++|+|.+||||||||++||||++++|+|||||
T Consensus 400 ~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ililD 479 (544)
T TIGR01842 400 DVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLD 479 (544)
T ss_pred CcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999998554 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhh
Q 000452 1410 EATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1410 EaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
||||+||++|++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|++|++
T Consensus 480 Epts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 480 EPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999875 6899999999999999999999999999999999999975
No 36
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.5e-71 Score=621.94 Aligned_cols=490 Identities=22% Similarity=0.361 Sum_probs=410.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 000452 988 STLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMS-LVA 1066 (1495)
Q Consensus 988 ~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~-~~~ 1066 (1495)
..++...+..+-+.+--+.+.++.+..+.|.-+..+|-+..-...-..-++..+...+...+-.++.+....+++. .++
T Consensus 3 ~~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~ 82 (497)
T COG5265 3 DRLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYG 82 (497)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcc
Confidence 3455566677777788888999999999999888777554444444444444444455555555555444444433 457
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHH
Q 000452 1067 WQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHV 1146 (1495)
Q Consensus 1067 ~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~ 1146 (1495)
|+++.+.+..+++|.++.-.-..-.-+.+|.-..+-+...+.-.+++-.-.|+|.|+.|+.+..++.+.++.+.++....
T Consensus 83 ~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~ 162 (497)
T COG5265 83 WWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKV 162 (497)
T ss_pred cHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHH
Confidence 88887777766666554433333333445555555666667778899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC
Q 000452 1147 AAAMEWLGFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCI 1225 (1495)
Q Consensus 1147 ~~~~~wl~~rl~~l~~~~~~~~~~~-~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~ 1225 (1495)
+....||++--..+........... ...+..|.++.|...+.-.|..++..+++.+...+.++.+.....|++.+..+.
T Consensus 163 ~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~ 242 (497)
T COG5265 163 HVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDV 242 (497)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhcc
Confidence 8888898887666554433322222 223456788999999999999999999999999999999999999999999887
Q ss_pred CCCCCCccccCCCCCCCC-CcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCcc
Q 000452 1226 PSEPPLEIEESRPNHSWP-SHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAG 1304 (1495)
Q Consensus 1226 ~~E~~~~~~~~~~~~~wp-~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G 1304 (1495)
+.|.. +....++-|| ..|.|.|+||+|.|.|+.| +|+|+||++++|+++||||++|+||||+.++|+|+|++++|
T Consensus 243 ~~~v~---d~pda~~L~~~~~g~v~F~~V~F~y~~~r~-iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 243 EAEVS---DAPDAPPLWPVRLGAVAFINVSFAYDPRRP-ILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred chhhc---cCCCCccccccccceEEEEEEEeeccccch-hhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 76643 2223445675 4688999999999998865 99999999999999999999999999999999999999999
Q ss_pred EEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCC
Q 000452 1305 QILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGE 1383 (1495)
Q Consensus 1305 ~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~ 1383 (1495)
.|.|||+||..+..+.||+.||+||||.+||+.|+..|+...+ +.+++|++.|++.++++++|+++|+|+||.|||.|-
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 9999999999999999999999999999999999999998654 799999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEe
Q 000452 1384 NWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEY 1463 (1495)
Q Consensus 1384 nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~ 1463 (1495)
.||||||||+++||++||+|+||+||||||+||..||+.||.+|++..+++|.++|||||+||.|+|.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhHHhhcCCChHHHHHH
Q 000452 1464 DSPRKLLENKSSSFSQLVA 1482 (1495)
Q Consensus 1464 gsp~~Ll~~~~s~f~~lv~ 1482 (1495)
|+|++|+++ +|.|++|+.
T Consensus 479 g~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 479 GTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred CcHHHHHHc-CChHHHHhc
Confidence 999999986 799999975
No 37
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.7e-68 Score=642.82 Aligned_cols=549 Identities=23% Similarity=0.284 Sum_probs=449.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 292 IKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSG-KRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLG 370 (1495)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g 370 (1495)
++.+.+..|+.+..+.++.++........|+++.++++.+.. .+.. ..-.-....+....++.+++.....+..+..+
T Consensus 138 l~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~-~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~ 216 (716)
T KOG0058|consen 138 LLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSA-DALKRACTILLGLFLIGALANAIRGGLLQYAG 216 (716)
T ss_pred HHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566678889999999999999999999999999998876 2221 11112233344455566777766666677778
Q ss_pred HHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 371 IRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAEL-SWYIHDPWLFLFEVALSFLILYKSLGIASVAAFF 449 (1495)
Q Consensus 371 ~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~-~~~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~ 449 (1495)
.|+-..++..+|++.++.....++++.+||++++++.|++.+.+. ..++.+..-..+|.+.++.+++..----+++.++
T Consensus 217 ~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i 296 (716)
T KOG0058|consen 217 ERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVTLI 296 (716)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHH
Confidence 888888888999999999999999999999999999999999875 5577777778888888887776544334455555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 450 GTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSF 529 (1495)
Q Consensus 450 ~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~ 529 (1495)
.+-+++.+..++++++++..++..++..+-.+...|.|++||++|.|+-|+.-.++-.+.=++-++..+|......+...
T Consensus 297 ~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~ 376 (716)
T KOG0058|consen 297 VVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFG 376 (716)
T ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHh
Confidence 55556666777788888888888888888889999999999999999999865444332222222222222222111111
Q ss_pred H--HHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc
Q 000452 530 V--FWCAPTFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVE 607 (1495)
Q Consensus 530 ~--~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~ 607 (1495)
. +...-..++++.+|.+.+.++.+|+|...+++.+-..+..++..+....+.++++..+.+|+.+|++.+..-+..-.
T Consensus 377 ~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G~ 456 (716)
T KOG0058|consen 377 STNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLTGT 456 (716)
T ss_pred HHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCCc
Confidence 1 11223456777888899999999999999999999999999999999999999999999999999986543222111
Q ss_pred CCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----
Q 000452 608 KQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT----- 682 (1495)
Q Consensus 608 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~----- 682 (1495)
..|. .-.+.|+++|++|+|+..++.++|+|+||+|+|||.||+||||||||||+.++|+.+|+|++|+|.+||.
T Consensus 457 ~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~ 535 (716)
T KOG0058|consen 457 LAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDI 535 (716)
T ss_pred cccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhc
Confidence 1232 3456899999999999888889999999999999999999999999999999999999999999999994
Q ss_pred --------EEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 --------KAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 --------~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
+|+|.|+|-+|++||+|||.+|.+ .++|+.+++.+.+..++++..+|+|++|.+||+|..|||||||||||
T Consensus 536 ~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAI 615 (716)
T KOG0058|consen 536 NHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAI 615 (716)
T ss_pred CHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHH
Confidence 699999999999999999999986 57788999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcC-
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSG- 832 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~- 832 (1495)
||||++||.|+||||.|||||++. +++.++.+....+++|||+|.|+++.++.||+|+++++|++++.|+++|+++..
T Consensus 616 ARALlr~P~VLILDEATSALDaeS-E~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~ 694 (716)
T KOG0058|consen 616 ARALLRNPRVLILDEATSALDAES-EYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSKPN 694 (716)
T ss_pred HHHHhcCCCEEEEechhhhcchhh-HHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhCcc
Confidence 999999999999999999999987 556678888888899999999999999999999999999999999999999887
Q ss_pred CchhHHHHHHH
Q 000452 833 TDFMELVDAHK 843 (1495)
Q Consensus 833 ~~~~~l~~~~~ 843 (1495)
+.|.++++.+.
T Consensus 695 gly~~Lv~~q~ 705 (716)
T KOG0058|consen 695 GLYAKLVQRQL 705 (716)
T ss_pred cHHHHHHHHhc
Confidence 57888887543
No 38
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.2e-67 Score=665.95 Aligned_cols=549 Identities=22% Similarity=0.313 Sum_probs=475.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 288 TLKLIKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLE 367 (1495)
Q Consensus 288 ~~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~ 367 (1495)
..+.++..++-+|+.+.-.++..++..++.++.|++.+.++|.+-...+ ...-..+++++.+..+++.++.....|...
T Consensus 141 ~~~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~-~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~ 219 (709)
T COG2274 141 GLSWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS-RSTLTVLAIGLLLAALFEALLRLLRTYLIA 219 (709)
T ss_pred chHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677777788888888899999999999999999999998865443 334566777788888889898888888999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 368 QLGIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIASVA 446 (1495)
Q Consensus 368 ~~g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~l~ 446 (1495)
+++.|+...+...+|+|.|+++...++++++|+++++++ |.+.|.++.. .+.......+-.++.+.+++.+-+.-+++
T Consensus 220 ~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li 298 (709)
T COG2274 220 HLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLI 298 (709)
T ss_pred HHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999995 9999998754 33444444444555666677777778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 447 AFFGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSI 526 (1495)
Q Consensus 447 gl~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~ 526 (1495)
+++.+++.+.+..++.+..++..++.++...++-+.+.|.++||++||..+-|+.+..++++.-.+..+.-.+.......
T Consensus 299 ~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~ 378 (709)
T COG2274 299 VLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALI 378 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 88888888888899999999999999999999999999999999999999999999999988887777776666665554
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc
Q 000452 527 TSFVFWCAPTF--VSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPD 604 (1495)
Q Consensus 527 ~~~~~~~~p~~--v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~ 604 (1495)
........+.+ +.+++||++.++.+.+|.|..+++.++...+..|+..+.+....+.+++++.+|+.+.++.|..++.
T Consensus 379 ~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~ 458 (709)
T COG2274 379 LNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEG 458 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 44433333322 4567899999999999999999999999999999999999999999999999999999988755332
Q ss_pred cccCCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--
Q 000452 605 LVEKQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-- 682 (1495)
Q Consensus 605 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-- 682 (1495)
...........+.|+++|++|.|..++ .++|+|+||+|++||++||+|+||||||||+|+|+|.++|++|+|.+||.
T Consensus 459 ~~~~~~~~~~~g~I~~~nvsf~y~~~~-~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl 537 (709)
T COG2274 459 DKTLIHLPKLQGEIEFENVSFRYGPDD-PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDL 537 (709)
T ss_pred ccccccccccCceEEEEEEEEEeCCCC-cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeH
Confidence 211111223346799999999998543 47999999999999999999999999999999999999999999999993
Q ss_pred -----------EEEEccCCcccCccHHHHHhcCCCC-CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHH
Q 000452 683 -----------KAYVAQSPWIQSGKIEDNILFGKEM-DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQR 750 (1495)
Q Consensus 683 -----------~ayv~Q~~~l~~~ti~enI~fg~~~-~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 750 (1495)
++||+|++.+|+|||+|||.++.|. +.|+..++++..+.++++..+|.|++|.+||+|.+||||||||
T Consensus 538 ~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQr 617 (709)
T COG2274 538 NDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQR 617 (709)
T ss_pred HhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHH
Confidence 6999999999999999999999875 4478888888899999999999999999999999999999999
Q ss_pred HHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHh
Q 000452 751 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
++||||++++|+|+||||||||||+++++.+.++ +.....|+|+|+|||++..+..||+|+||++|+|+++|+++|+++
T Consensus 618 lalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~-L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 618 LALARALLSKPKILLLDEATSALDPETEAIILQN-LLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred HHHHHHhccCCCEEEEeCcccccCHhHHHHHHHH-HHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHHH
Confidence 9999999999999999999999999999999876 455667899999999999999999999999999999999999999
Q ss_pred cCCchhHHHH
Q 000452 831 SGTDFMELVD 840 (1495)
Q Consensus 831 ~~~~~~~l~~ 840 (1495)
.++.|.++..
T Consensus 697 ~~g~y~~l~~ 706 (709)
T COG2274 697 QGGLYARLYQ 706 (709)
T ss_pred hcChHHHHHh
Confidence 8887777654
No 39
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.5e-68 Score=726.33 Aligned_cols=568 Identities=16% Similarity=0.194 Sum_probs=448.6
Q ss_pred cCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 000452 909 GKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARS 988 (1495)
Q Consensus 909 g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~ 988 (1495)
..+++...++|........ +.+.+++.++..+.....++.+....+... .......+...+++++++..++.+++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~-~~i~~i~~~~~~~~~p~~~~i~g~iid~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~ 118 (1466)
T PTZ00265 43 QKIPFFLPFKCLPASHRKL-LGVSFVCATISGGTLPFFVSVFGVIMKNMN---LGENVNDIIFSLVLIGIFQFILSFISS 118 (1466)
T ss_pred ccccHHHHHhcCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455554455544333222 222233333333444444444443332110 111223445566677788888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 989 TLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQ 1068 (1495)
Q Consensus 989 ~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1495)
++....+.+...+++.++++++++.|++|||..+.|++.+|++.|++.+...+...+..++..++.+++.++++++.+|.
T Consensus 119 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~ 198 (1466)
T PTZ00265 119 FCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNAR 198 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHH
Q 000452 1069 VFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAA 1148 (1495)
Q Consensus 1069 ~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~ 1148 (1495)
++++++.++++++++..++.+..+...+......+...+.+.|+++|++|||+|+.|+++.+++.+..+.+.+.......
T Consensus 199 Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~ 278 (1466)
T PTZ00265 199 LTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANF 278 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888777777777777777777777777777778899999999999999999999999999999888877776655544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhcC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 000452 1149 AMEWLGFRLDMLSNITFAFSLVFLI-SIPK--------GFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 1219 (1495)
Q Consensus 1149 ~~~wl~~rl~~l~~~~~~~~~~~~~-~~~~--------~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi 1219 (1495)
...+......++..+..+++.++.. .... +.+++|.+...+.+.+.....+..+...+..+.....|.+|+
T Consensus 279 ~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri 358 (1466)
T PTZ00265 279 MESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSL 358 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444333333332222222222211 1112 234555443333333332333344556677888999999999
Q ss_pred HHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCCC-CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc
Q 000452 1220 FQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHM-PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRI 1298 (1495)
Q Consensus 1220 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~-~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl 1298 (1495)
.+.++.+++.+.. . .....|..+.|+|+||+|+|+... .+||+|+||+|++||++||||+||||||||+++|.|+
T Consensus 359 ~~ii~~~~~~~~~-~---~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl 434 (1466)
T PTZ00265 359 YEIINRKPLVENN-D---DGKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERL 434 (1466)
T ss_pred HHHHcCCCCCCCC-C---CCccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHh
Confidence 9999876553211 1 111123345899999999997532 3699999999999999999999999999999999999
Q ss_pred ccCCccEEEE-cCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCC-------------------------------
Q 000452 1299 VEPAAGQILI-DGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL------------------------------- 1346 (1495)
Q Consensus 1299 ~ep~~G~I~I-DG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~------------------------------- 1346 (1495)
|+|++|+|.| ||.|+++++.+++|++|++|||+|.||++||++||...
T Consensus 435 ~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (1466)
T PTZ00265 435 YDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSC 514 (1466)
T ss_pred ccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccc
Confidence 9999999999 57999999999999999999999999999999999642
Q ss_pred ---------------------------CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1347 ---------------------------EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1347 ---------------------------~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
.+.+|+++++|++++++++++.++|+|+||.++++|.+||||||||++|||||
T Consensus 515 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAl 594 (1466)
T PTZ00265 515 RAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAI 594 (1466)
T ss_pred cccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHH
Confidence 13578999999999999999999999999999999999999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhccCEEEEEeCc-------------------
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVIDSDMVLLLSHG------------------- 1458 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~~DrIlVL~~G------------------- 1458 (1495)
+++|+|||||||||+||++++..|++.|++.. +++|+|+||||++++..||+|+||++|
T Consensus 595 l~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~ 674 (1466)
T PTZ00265 595 IRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDN 674 (1466)
T ss_pred hcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccc
Confidence 99999999999999999999999999999885 489999999999999999999999986
Q ss_pred ----------------------------EEEEecChhHHhhcCCChHHHHHHHH
Q 000452 1459 ----------------------------LIEEYDSPRKLLENKSSSFSQLVAEY 1484 (1495)
Q Consensus 1459 ----------------------------~ivE~gsp~~Ll~~~~s~f~~lv~~~ 1484 (1495)
+|+|+|+|+||+++++|.|+.|++..
T Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q 728 (1466)
T PTZ00265 675 KENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQ 728 (1466)
T ss_pred cccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhh
Confidence 59999999999986789999999654
No 40
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=7.7e-67 Score=681.67 Aligned_cols=544 Identities=18% Similarity=0.222 Sum_probs=454.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 290 KLIKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQL 369 (1495)
Q Consensus 290 ~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 369 (1495)
..++..++.+++.+....+..++..++.++.|++++.++|.+..... ....+.++++++++.++..++.....+...++
T Consensus 143 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (710)
T TIGR03796 143 RALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR-QDWLRPLLLGMGLTALLQGVLTWLQLYYLRRL 221 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667778888888888999999999999999999997754332 22234455555566666777777778888899
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 370 GIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIASVAAF 448 (1495)
Q Consensus 370 g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl 448 (1495)
+.++...+...+|+|.++++.....++++|+++|+++.| +.+.+++. .+..+....+.+++.+++++..-++.+++.+
T Consensus 222 ~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l 300 (710)
T TIGR03796 222 QIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGI 300 (710)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998999999999999988 67887653 4455556666666666666666666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 449 FGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITS 528 (1495)
Q Consensus 449 ~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~ 528 (1495)
+.+++.+.+...+.+...+..++.++..+++.+.+.|.++|+++||.+++|+.+.+++.+.+.++.+...+.........
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (710)
T TIGR03796 301 AFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILG 380 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677777788888888899999999999999999999999999999999999999888877776665555444333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 000452 529 FVFWCAPT--FVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLV 606 (1495)
Q Consensus 529 ~~~~~~p~--~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~ 606 (1495)
.+...... .+.++.++.+.+.++.+|.|.+++++.++..+..|+..++..+..+.+++++++|+.++++.++..+...
T Consensus 381 ~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~ 460 (710)
T TIGR03796 381 VLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEE 460 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence 32222222 2334567778888899999999999999999999999999999999999999999999998764332211
Q ss_pred ----c--CCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEc
Q 000452 607 ----E--KQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLC 680 (1495)
Q Consensus 607 ----~--~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~ 680 (1495)
. ..+.......|+++|++|+|+.. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+|
T Consensus 461 ~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~id 539 (710)
T TIGR03796 461 EEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFD 539 (710)
T ss_pred ccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Confidence 0 01101123479999999999743 4689999999999999999999999999999999999999999999999
Q ss_pred Ce-------------EEEEccCCcccCccHHHHHhcCC-CCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchH
Q 000452 681 GT-------------KAYVAQSPWIQSGKIEDNILFGK-EMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGG 746 (1495)
Q Consensus 681 g~-------------~ayv~Q~~~l~~~ti~enI~fg~-~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGG 746 (1495)
|. ++||||+|++|++||+|||.++. +.+++++.++++.++++++++.+|+|++|.+||+|.+||||
T Consensus 540 g~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGG 619 (710)
T TIGR03796 540 GIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGG 619 (710)
T ss_pred CEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHH
Confidence 83 69999999999999999999876 47899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChH
Q 000452 747 QKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 747 QkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~ 826 (1495)
|||||+||||++++|+|+||||||||||+++++++++.+.. .++|+|+|||+++.+..||+|++|++|++++.|+++
T Consensus 620 QrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~ 696 (710)
T TIGR03796 620 QRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHE 696 (710)
T ss_pred HHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHH
Confidence 99999999999999999999999999999999999876543 589999999999999999999999999999999999
Q ss_pred HHHhcCCchhHHH
Q 000452 827 DVINSGTDFMELV 839 (1495)
Q Consensus 827 ~l~~~~~~~~~l~ 839 (1495)
|+++.++.|.+++
T Consensus 697 ~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 697 ELWAVGGAYARLI 709 (710)
T ss_pred HHHHcCCcHHHHh
Confidence 9998877777654
No 41
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.5e-69 Score=644.73 Aligned_cols=465 Identities=27% Similarity=0.401 Sum_probs=360.6
Q ss_pred cEEEEeeEEEecCCCC-CCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCC----CcEEEEcCe---------
Q 000452 617 AIEIADGNFSWDISSH-NPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKI----SGTLKLCGT--------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~-~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~----~G~v~~~g~--------- 682 (1495)
.++++|++..|...+. .++++||||++.+||.+||+|++||||||+.++|+|..++. +|+|.++|+
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975532 25999999999999999999999999999999999999987 899998883
Q ss_pred --------EEEEccCCcc-cC--ccHHHHH----hcCCCCC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCcc
Q 000452 683 --------KAYVAQSPWI-QS--GKIEDNI----LFGKEMD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINL 743 (1495)
Q Consensus 683 --------~ayv~Q~~~l-~~--~ti~enI----~fg~~~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~L 743 (1495)
+||++|+|+- +| .||.+-| ......+ +++..+.++..+|.+... . +.....|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~-------~--~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPER-------R--DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhh-------h--ccCCccc
Confidence 6999999852 33 3554444 3333222 223344455555543222 1 5678999
Q ss_pred chHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh--CCCEEEEEecCCCcccc-CCEEEEEeCCEEE
Q 000452 744 SGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--NSKTVLYVTHQVEFLPA-ADLVLVIKDGKIT 820 (1495)
Q Consensus 744 SGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~ 820 (1495)
||||||||.||+||..+|+++|+||||+|||+.++.+|.+. ++.+. .|.++|+||||++.+.+ ||+|+||++|+++
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~l-lk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iV 234 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDL-LKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIV 234 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHH-HHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEE
Confidence 99999999999999999999999999999999999999864 44443 48999999999999876 9999999999999
Q ss_pred EecChHHHHhcCC-chhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchhhh
Q 000452 821 QAGKYTDVINSGT-DFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQ 899 (1495)
Q Consensus 821 ~~g~~~~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (1495)
+.|+.++++++.. .|..-+
T Consensus 235 E~G~~~~i~~~p~hpYT~~L------------------------------------------------------------ 254 (539)
T COG1123 235 ETGPTEEILSNPQHPYTRGL------------------------------------------------------------ 254 (539)
T ss_pred EecCHHHHHhccCCcccHHH------------------------------------------------------------
Confidence 9999999875321 000000
Q ss_pred hhHHHHHhhcCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHH
Q 000452 900 LVQEEEREKGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFG 979 (1495)
Q Consensus 900 ~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~ 979 (1495)
. .+ .|.....
T Consensus 255 -l-------------------~a--------------------------------------~p~~~~~------------ 264 (539)
T COG1123 255 -L-------------------AA--------------------------------------VPRLGDE------------ 264 (539)
T ss_pred -H-------------------hh--------------------------------------CCCcccc------------
Confidence 0 00 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHH
Q 000452 980 SSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVI 1059 (1495)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~ 1059 (1495)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHh
Q 000452 1060 GVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGY 1139 (1495)
Q Consensus 1060 ~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~ 1139 (1495)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 000452 1140 SRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 1219 (1495)
Q Consensus 1140 ~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi 1219 (1495)
..
T Consensus 265 -------------------------------------~~----------------------------------------- 266 (539)
T COG1123 265 -------------------------------------KI----------------------------------------- 266 (539)
T ss_pred -------------------------------------cc-----------------------------------------
Confidence 00
Q ss_pred HHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCC---------CCCcceeeeeEEeeCCcEEEEEcCCCCCHHH
Q 000452 1220 FQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAP---------HMPFVLRGISCTFPGEKKTGIVGRTGSGKST 1290 (1495)
Q Consensus 1220 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~---------~~~~vL~~Is~~I~~GekvgIVGrTGSGKST 1290 (1495)
...+.+.+ . +...-++++|++.+|.. +...+++||||++++||.+||||.|||||||
T Consensus 267 ---~~~~~~~~--------~---~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKST 332 (539)
T COG1123 267 ---IRLPRRGP--------L---RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKST 332 (539)
T ss_pred ---cccccccc--------c---ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHH
Confidence 00000000 0 01225789999999974 1246899999999999999999999999999
Q ss_pred HHHHHhccccCCccEEEEcCEe--CCCCCHHHHhcccEEEcccCcC--C-CCcHHHhcC-CCCC-------CCHHHHHHH
Q 000452 1291 LIQTLFRIVEPAAGQILIDGID--ISLIGLHDLRTRLSIIPQDPVM--F-EGTVRSNVD-PLEE-------YTDEQIWEA 1357 (1495)
Q Consensus 1291 Ll~~L~rl~ep~~G~I~IDG~d--I~~i~l~~LR~~isiIpQdp~L--F-~GTIR~NLd-p~~~-------~sd~ei~~a 1357 (1495)
|.++|+|+++|++|+|.++|.| .+.-....+|+++-+|.|||+- - ..||+++|. |... ..++.+-+.
T Consensus 333 lar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~l 412 (539)
T COG1123 333 LARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAEL 412 (539)
T ss_pred HHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHH
Confidence 9999999999999999999977 3333356688899999999963 2 459999985 4431 122357788
Q ss_pred HHHcCCcH-HHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--Cc
Q 000452 1358 LDKCQLGD-EVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DC 1434 (1495)
Q Consensus 1358 L~~~~L~~-~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~ 1434 (1495)
|++++|.+ +..+.| ..||||||||+||||||..+|++||+|||||+||+-+.+.|.+.|.+.-+ +.
T Consensus 413 l~~VgL~~~~l~ryP-----------~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~ 481 (539)
T COG1123 413 LELVGLPPEFLDRYP-----------HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGL 481 (539)
T ss_pred HHHcCCCHHHHhcCc-----------hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCC
Confidence 99999986 344444 46899999999999999999999999999999999999999998876543 69
Q ss_pred EEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHH
Q 000452 1435 TVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEY 1484 (1495)
Q Consensus 1435 TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~ 1484 (1495)
|.|+|+|+++.+.. ||||.||++|+|||.|+.++..+++...|.+..-+.
T Consensus 482 t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~a 532 (539)
T COG1123 482 TYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLAA 532 (539)
T ss_pred EEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHHh
Confidence 99999999999987 999999999999999999999998877777665443
No 42
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.4e-66 Score=676.13 Aligned_cols=543 Identities=21% Similarity=0.256 Sum_probs=448.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 290 KLIKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQL 369 (1495)
Q Consensus 290 ~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 369 (1495)
.+++..++.+++.++...++.++..++.++.|++++.++|.+..... ....+.++++++++.++..++.....+...++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (686)
T TIGR03797 125 DLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD-RSLLVQIALALLAAAVGAAAFQLAQSLAVLRL 203 (686)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666567788888888999999999999999999999998754322 22234445555666666777777777788899
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 370 GIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWY-IHDPWLFLFEVALSFLILYKSLGIASVAAF 448 (1495)
Q Consensus 370 g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl 448 (1495)
+.++...+...+|+|.++++....+++++|+++|+++ |++.+.+++.. +.......+.+++++++++..-++.+++.+
T Consensus 204 ~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l 282 (686)
T TIGR03797 204 ETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAV 282 (686)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999889999999999997 89999876543 223333333344555556655566666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 449 FGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITS 528 (1495)
Q Consensus 449 ~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~ 528 (1495)
+++++..++...+.+...+..++.++..+++.+...|.++|+++||.++.|+.+.+++++..++..+...+.........
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (686)
T TIGR03797 283 ALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLT 362 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666777788888899999999999999999999999999999999999988887766655554444444443333
Q ss_pred HHHHHHHHH--HHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 000452 529 FVFWCAPTF--VSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLV 606 (1495)
Q Consensus 529 ~~~~~~p~~--v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~ 606 (1495)
.+......+ +.++.++.+.+.++.+|.|.++++.+++..+..|+..++..+..+.+++++++|+.++++.++..+...
T Consensus 363 ~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~ 442 (686)
T TIGR03797 363 VFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK 442 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc
Confidence 332222222 233456677777889999999999999999999999999999999999999999999998754322111
Q ss_pred cCCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe----
Q 000452 607 EKQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT---- 682 (1495)
Q Consensus 607 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~---- 682 (1495)
. .+ ......|+++|++|+|+.+ ++++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.
T Consensus 443 ~-~~-~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~ 519 (686)
T TIGR03797 443 T-DP-GKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAG 519 (686)
T ss_pred C-CC-CCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCc
Confidence 1 11 1123469999999999643 468999999999999999999999999999999999999999999999983
Q ss_pred ---------EEEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 ---------KAYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 ---------~ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
++||||+|++|++||+|||.+|.+.+++++.++++.|+++++++.+|+|++|.+||+|.+||||||||++|
T Consensus 520 ~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRial 599 (686)
T TIGR03797 520 LDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLI 599 (686)
T ss_pred CCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHH
Confidence 69999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCC
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGT 833 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 833 (1495)
|||++++|+|+|||||||+||+++++++.+.+ ... ++|+|+|||+++.+..||+|++|++|+|++.|+++|+++.++
T Consensus 600 ARAll~~p~iLiLDEpTS~LD~~te~~i~~~L-~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~~~ 676 (686)
T TIGR03797 600 ARALVRKPRILLFDEATSALDNRTQAIVSESL-ERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAREG 676 (686)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhCCc
Confidence 99999999999999999999999999998764 333 689999999999999999999999999999999999998887
Q ss_pred chhHHHH
Q 000452 834 DFMELVD 840 (1495)
Q Consensus 834 ~~~~l~~ 840 (1495)
.|.++..
T Consensus 677 ~y~~l~~ 683 (686)
T TIGR03797 677 LFAQLAR 683 (686)
T ss_pred HHHHHHH
Confidence 7887664
No 43
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=5.2e-66 Score=671.69 Aligned_cols=538 Identities=21% Similarity=0.298 Sum_probs=446.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 289 LKLIKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQ 368 (1495)
Q Consensus 289 ~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~ 368 (1495)
.+.++..++.+++.+....++.++..++.++.|++++.++|.+..... ....+.+++++++..++..++.....+...+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (694)
T TIGR03375 135 KHWFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA-FETLWVLAIGVALAIVFDFVLKTLRSYFLDV 213 (694)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566677888888888899999999999999999999998754322 1223344444555556666777777778888
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 369 LGIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWY-IHDPWLFLFEVALSFLILYKSLGIASVAA 447 (1495)
Q Consensus 369 ~g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~w~~pl~i~~~~~lL~~~lG~~~l~g 447 (1495)
++.++...+...+|+|.++++... .+.++|++++++ +|++.+.+++.. +.......+.+++.+++++..-++.+++.
T Consensus 214 ~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~ 291 (694)
T TIGR03375 214 AGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVP 291 (694)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999877 678999999999 799999987543 22333333334444555555556666667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 448 FFGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSIT 527 (1495)
Q Consensus 448 l~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~ 527 (1495)
++++.+.+++..++.+..++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++.+..++..+...+........
T Consensus 292 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (694)
T TIGR03375 292 LVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLA 371 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777888888899999999999999999999999999999999999999999888877776666655555443
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 000452 528 SFVFWCAPT--FVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDL 605 (1495)
Q Consensus 528 ~~~~~~~p~--~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~ 605 (1495)
..+...... .+.++.++.+.+.++.+|.|.+++++.++..+..|+..++..+..+.+++++++|+.++++.++..+..
T Consensus 372 ~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~ 451 (694)
T TIGR03375 372 TNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEG 451 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 333222222 233456777888888999999999999999999999999999999999999999999999876543221
Q ss_pred ccCCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC----
Q 000452 606 VEKQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---- 681 (1495)
Q Consensus 606 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g---- 681 (1495)
....+.......|+++|++|+|+. .++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||
T Consensus 452 ~~~~~~~~~~~~I~~~~vsf~Y~~-~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~ 530 (694)
T TIGR03375 452 TRFLHRPRLQGEIEFRNVSFAYPG-QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIR 530 (694)
T ss_pred CCCCCCCCccceEEEEEEEEEeCC-CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhh
Confidence 111111112346999999999963 346799999999999999999999999999999999999999999999998
Q ss_pred ---------eEEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHH
Q 000452 682 ---------TKAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRI 751 (1495)
Q Consensus 682 ---------~~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 751 (1495)
.++||||+|++|++||+|||.++.+ .+++++.++++.++++++++.+|+|++|.+||+|.+||||||||+
T Consensus 531 ~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRl 610 (694)
T TIGR03375 531 QIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAV 610 (694)
T ss_pred hCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHH
Confidence 4699999999999999999999986 789999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000452 752 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
+||||++++|+|+|||||||+||+++++++.+. +....+++|+|+|||+++.+..||+|++|++|++++.|+++|+++.
T Consensus 611 alARall~~p~iliLDE~Ts~LD~~te~~i~~~-l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~~ 689 (694)
T TIGR03375 611 ALARALLRDPPILLLDEPTSAMDNRSEERFKDR-LKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLEA 689 (694)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHHH
Confidence 999999999999999999999999999999764 5666678999999999999999999999999999999999998754
No 44
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=6.3e-66 Score=669.53 Aligned_cols=539 Identities=20% Similarity=0.236 Sum_probs=427.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 295 MFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIRLR 374 (1495)
Q Consensus 295 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~rir 374 (1495)
+++.+|+.++...++.++..++..+.|+++..++|.+........ -...+..+++..++..++.....+.....+.++.
T Consensus 155 ~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 233 (711)
T TIGR00958 155 LSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPA-LASAIFFMCLLSIASSVSAGLRGGSFNYTMARIN 233 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667778888889999999999999999999998864332111 1111222223333334444333444455667777
Q ss_pred HHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 375 AALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIASVAAFFGTVI 453 (1495)
Q Consensus 375 ~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~~i~ 453 (1495)
..+...+|+|.++.+....++.++|+++|+++.|++.+.+.+. .+..++...+++++++++++..-...+++.++.+.+
T Consensus 234 ~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l 313 (711)
T TIGR00958 234 LRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPL 313 (711)
T ss_pred HHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 7788899999999999988999999999999999999987653 556666777777777776665544445555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 454 FMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFVFWC 533 (1495)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~ 533 (1495)
...+...+.+..++..++.++..++......|.++|+++||.|++|+.+.++..+..++-.+...+.....+....+...
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (711)
T TIGR00958 314 VFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSV 393 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566677777888888888899999999999999999999999999877776655443333222222222221111111
Q ss_pred --HHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCC
Q 000452 534 --APTFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEKQPR 611 (1495)
Q Consensus 534 --~p~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~ 611 (1495)
.-..+.++.++.+.+..+.+++|.+++++.++..+..|+..++..+..+.+++++.+||.++++.++..+......+.
T Consensus 394 ~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~ 473 (711)
T TIGR00958 394 LGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGTLAPL 473 (711)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCC
Confidence 112233455677777888999999999999999999999999999999999999999999999875443221111111
Q ss_pred CCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC----------
Q 000452 612 GSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------- 681 (1495)
Q Consensus 612 ~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g---------- 681 (1495)
.....|+++|++|+|+..+++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||
T Consensus 474 -~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~ 552 (711)
T TIGR00958 474 -NLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHY 552 (711)
T ss_pred -CCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHH
Confidence 123469999999999754446899999999999999999999999999999999999999999999998
Q ss_pred ---eEEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 682 ---TKAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 682 ---~~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
.++||||+|++|++||||||.+|.+ .++++..++++.++++++++.+|+|++|.+||+|.+||||||||++||||+
T Consensus 553 lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARAL 632 (711)
T TIGR00958 553 LHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARAL 632 (711)
T ss_pred HHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHH
Confidence 3699999999999999999999965 678899999999999999999999999999999999999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCCchhH
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGTDFME 837 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 837 (1495)
+++|+|+|||||||+||+++++.+.+ ....+++|+|+|||+++.+..||+|++|++|+|++.|+++|++++++.|.+
T Consensus 633 l~~p~ILILDEpTSaLD~~te~~i~~---~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~~~y~~ 709 (711)
T TIGR00958 633 VRKPRVLILDEATSALDAECEQLLQE---SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQGCYKH 709 (711)
T ss_pred hcCCCEEEEEccccccCHHHHHHHHH---hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCCCchHh
Confidence 99999999999999999999888876 223468999999999999999999999999999999999999987766665
Q ss_pred H
Q 000452 838 L 838 (1495)
Q Consensus 838 l 838 (1495)
+
T Consensus 710 l 710 (711)
T TIGR00958 710 L 710 (711)
T ss_pred c
Confidence 4
No 45
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-68 Score=676.62 Aligned_cols=484 Identities=23% Similarity=0.363 Sum_probs=359.6
Q ss_pred ccEEEEeeEEEecCCC-CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC-------------
Q 000452 616 TAIEIADGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------- 681 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g------------- 681 (1495)
..++++|++++|.... ..++|+||||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 11 ~~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~ 90 (623)
T PRK10261 11 DVLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIEL 90 (623)
T ss_pred ceEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEecccccccccc
Confidence 3699999999996322 34799999999999999999999999999999999999999999998754
Q ss_pred --------------eEEEEccCC--ccc-CccHHHHHhcCCC----CCH----HHHHHHHHHhCcHHHHhhcCCCCcccc
Q 000452 682 --------------TKAYVAQSP--WIQ-SGKIEDNILFGKE----MDR----ERYNAVLDACSLEKDLEILSFGDQTVV 736 (1495)
Q Consensus 682 --------------~~ayv~Q~~--~l~-~~ti~enI~fg~~----~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~i 736 (1495)
.++||+|+| .++ ..||+|||.++.. .+. ++..++++..+|.+. ....
T Consensus 91 ~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~--------~~~~ 162 (623)
T PRK10261 91 SEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEA--------QTIL 162 (623)
T ss_pred ccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------hhHH
Confidence 379999998 344 4699999987531 222 234444555544210 1123
Q ss_pred cCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-C-CCEEEEEecCCCcccc-CCEEEE
Q 000452 737 GERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-N-SKTVLYVTHQVEFLPA-ADLVLV 813 (1495)
Q Consensus 737 g~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvIlvTH~~~~l~~-~d~i~~ 813 (1495)
.+...+|||||||||+|||||+.+|+++||||||++||+.+.+.+.+ ++..+. + |+|+|+|||+++.+.. ||+|++
T Consensus 163 ~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~-ll~~l~~~~g~tvi~itHdl~~~~~~adri~v 241 (623)
T PRK10261 163 SRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQ-LIKVLQKEMSMGVIFITHDMGVVAEIADRVLV 241 (623)
T ss_pred hCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHH-HHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEE
Confidence 56788999999999999999999999999999999999999888875 454443 3 8999999999999865 999999
Q ss_pred EeCCEEEEecChHHHHhcCC-chhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCccccccccccccccccccccc
Q 000452 814 IKDGKITQAGKYTDVINSGT-DFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDK 892 (1495)
Q Consensus 814 l~~G~i~~~g~~~~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (1495)
|++|++++.|+++++..... .+..
T Consensus 242 l~~G~i~~~g~~~~~~~~~~~~~~~------------------------------------------------------- 266 (623)
T PRK10261 242 MYQGEAVETGSVEQIFHAPQHPYTR------------------------------------------------------- 266 (623)
T ss_pred eeCCeecccCCHHHhhcCCCChhhh-------------------------------------------------------
Confidence 99999999999877643210 0000
Q ss_pred ccchhhhhhHHHHHhhcCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHH
Q 000452 893 VAEPQRQLVQEEEREKGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIV 972 (1495)
Q Consensus 893 ~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~ 972 (1495)
. ++.. .+....
T Consensus 267 ------~-------------------l~~~--------------------------------------~~~~~~------ 277 (623)
T PRK10261 267 ------A-------------------LLAA--------------------------------------VPQLGA------ 277 (623)
T ss_pred ------h-------------------hhhc--------------------------------------cCcccc------
Confidence 0 0000 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHH
Q 000452 973 FVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSI 1052 (1495)
Q Consensus 973 y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~ 1052 (1495)
+..+ ..| ++ .+.
T Consensus 278 ---------------------------------~~~~--~~~---------~~---------------~~~--------- 289 (623)
T PRK10261 278 ---------------------------------MKGL--DYP---------RR---------------FPL--------- 289 (623)
T ss_pred ---------------------------------cccc--cCC---------cc---------------ccc---------
Confidence 0000 000 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHH
Q 000452 1053 IRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTN 1132 (1495)
Q Consensus 1053 ~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~ 1132 (1495)
T Consensus 290 -------------------------------------------------------------------------------- 289 (623)
T PRK10261 290 -------------------------------------------------------------------------------- 289 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1133 MELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENK 1212 (1495)
Q Consensus 1133 ~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~ 1212 (1495)
..
T Consensus 290 -----------------------------------------------~~------------------------------- 291 (623)
T PRK10261 290 -----------------------------------------------IS------------------------------- 291 (623)
T ss_pred -----------------------------------------------cc-------------------------------
Confidence 00
Q ss_pred hhHHHHHHHHhcCCC-CCCCccccCCCCCCCCCcceEEEeeeeEEeCCC---------CCcceeeeeEEeeCCcEEEEEc
Q 000452 1213 IISVERIFQYTCIPS-EPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPH---------MPFVLRGISCTFPGEKKTGIVG 1282 (1495)
Q Consensus 1213 ~~sveRi~~~~~~~~-E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~---------~~~vL~~Is~~I~~GekvgIVG 1282 (1495)
...+. +++..... ..+ +...-++++|++++|+.. ...+|+||||+|++||++||+|
T Consensus 292 ----------~~~~~~~~~~~~~~-~~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG 357 (623)
T PRK10261 292 ----------LEHPAKQEPPIEQD-TVV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVG 357 (623)
T ss_pred ----------cccccccCcccccc-ccc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEEC
Confidence 00000 00000000 000 011259999999999621 1359999999999999999999
Q ss_pred CCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHH---HHhcccEEEcccC--cCCCC-cHHHhcCC-C---CCCC--
Q 000452 1283 RTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH---DLRTRLSIIPQDP--VMFEG-TVRSNVDP-L---EEYT-- 1350 (1495)
Q Consensus 1283 rTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR~~isiIpQdp--~LF~G-TIR~NLdp-~---~~~s-- 1350 (1495)
+||||||||+++|.|+.+|++|+|.++|.++...+.. .+|++++||||+| .++.. ||++|+.. . +..+
T Consensus 358 ~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~ 437 (623)
T PRK10261 358 ESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGK 437 (623)
T ss_pred CCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHH
Confidence 9999999999999999999999999999999877643 4678899999998 47654 99999852 1 1111
Q ss_pred --HHHHHHHHHHcCCc-HHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHH
Q 000452 1351 --DEQIWEALDKCQLG-DEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSL 1427 (1495)
Q Consensus 1351 --d~ei~~aL~~~~L~-~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~I 1427 (1495)
++++.++|+.+++. +...+.| ..||||||||++|||||+.+|+||||||||++||..+.+.|.+.|
T Consensus 438 ~~~~~~~~~L~~~gL~~~~~~~~~-----------~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll 506 (623)
T PRK10261 438 AAAARVAWLLERVGLLPEHAWRYP-----------HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLL 506 (623)
T ss_pred HHHHHHHHHHHHcCCCHHHhhCCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 24577888888885 3333332 469999999999999999999999999999999999999999999
Q ss_pred HHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCCChHH-HHHHH
Q 000452 1428 RQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKSSSFS-QLVAE 1483 (1495)
Q Consensus 1428 r~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~-~lv~~ 1483 (1495)
++..+ +.|||+|||+++.+.. ||||++|++|+|+|.|++++++.++...|. .++..
T Consensus 507 ~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~~ 566 (623)
T PRK10261 507 LDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMAA 566 (623)
T ss_pred HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHhh
Confidence 88643 6899999999999876 999999999999999999999876554454 45443
No 46
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=9.7e-65 Score=661.21 Aligned_cols=542 Identities=20% Similarity=0.299 Sum_probs=437.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 292 IKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGI 371 (1495)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~ 371 (1495)
+...++.+++.++...++.++..++.++.|++++.++|.+..... ....+.++++++++.++..++.....+...+++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (708)
T TIGR01193 147 FIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM-MGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQ 225 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444566677888888888999999999999999999997754321 1222334444455556666666666777888999
Q ss_pred HHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 372 RLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWYI-HDPWLFLFEVALSFLILYKSLGIASVAAFFG 450 (1495)
Q Consensus 372 rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~-~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~ 450 (1495)
++...+...+|+|.++++....++.++|+++|+++ |++.+.+++... .......+.+++.+++++..-++.+++.+++
T Consensus 226 ~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~ 304 (708)
T TIGR01193 226 RLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLSLLS 304 (708)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999998 999998865432 2233333344444444554444445555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 451 TVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFV 530 (1495)
Q Consensus 451 ~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~ 530 (1495)
+++.+.+...+.+..++..++.++..+++.....|.++|+++||.+++|+.+.+++++..++..+...+..........+
T Consensus 305 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (708)
T TIGR01193 305 IPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAI 384 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556666777888888999999999999999999999999999999999998887766554444333333222222211
Q ss_pred HHHH--HHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 000452 531 FWCA--PTFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEK 608 (1495)
Q Consensus 531 ~~~~--p~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~ 608 (1495)
.... -..+.++.++.+.+..+.+|.|.++++..++..+..|+..+...+..+.+++++++|+.++++.++..+.....
T Consensus 385 ~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~~ 464 (708)
T TIGR01193 385 KAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKKR 464 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc
Confidence 1111 11234556788888899999999999999999999999999999999999999999999999876433221110
Q ss_pred CCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------
Q 000452 609 QPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------ 682 (1495)
Q Consensus 609 ~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------ 682 (1495)
.+.....+.|+++|++|+|+. ++++|+|+||+|++|+.++|+|+||||||||+++|+|+++|++|+|.+||.
T Consensus 465 ~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~ 542 (708)
T TIGR01193 465 TELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKDID 542 (708)
T ss_pred cCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHHcC
Confidence 111122347999999999962 358999999999999999999999999999999999999999999999983
Q ss_pred -------EEEEccCCcccCccHHHHHhcCC--CCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 -------KAYVAQSPWIQSGKIEDNILFGK--EMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 -------~ayv~Q~~~l~~~ti~enI~fg~--~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
++||||+|++|++||+|||.+|. ..+++++.++++.++++++++.+|+|.+|.+||+|.+||||||||++|
T Consensus 543 ~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRial 622 (708)
T TIGR01193 543 RHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRIAL 622 (708)
T ss_pred HHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHHHH
Confidence 69999999999999999999983 478889999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCC
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGT 833 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 833 (1495)
|||++++|+|+|||||||+||+++++++.+.+. . .+++|+|+|||+++.+..||+|++|++|++++.|+++|+++.++
T Consensus 623 ARall~~p~iliLDE~Ts~LD~~te~~i~~~L~-~-~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~~~ 700 (708)
T TIGR01193 623 ARALLTDSKVLILDESTSNLDTITEKKIVNNLL-N-LQDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLDRNG 700 (708)
T ss_pred HHHHhhCCCEEEEeCccccCCHHHHHHHHHHHH-H-hcCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHhcCC
Confidence 999999999999999999999999999887654 3 36899999999999999999999999999999999999998877
Q ss_pred chhHHH
Q 000452 834 DFMELV 839 (1495)
Q Consensus 834 ~~~~l~ 839 (1495)
.|.+++
T Consensus 701 ~y~~l~ 706 (708)
T TIGR01193 701 FYASLI 706 (708)
T ss_pred cHHHHh
Confidence 777664
No 47
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=2e-65 Score=648.35 Aligned_cols=514 Identities=19% Similarity=0.166 Sum_probs=403.6
Q ss_pred HHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000452 935 AQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAP 1014 (1495)
Q Consensus 935 ~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap 1014 (1495)
+.++..+..++.++.++.+.+.. . ......+..++++.++..++.++..++....+.+....++.++++++++.|
T Consensus 26 ~~~~~~~~~~~~~~~i~~~i~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~ 100 (555)
T TIGR01194 26 LGLAGGLAIIALLASINNAIHEE---N--FLGQGSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGAP 100 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC---C--cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34455556666667776554311 0 000012233445556666777888888889999999999999999999999
Q ss_pred cccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1015 MSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSAREL 1094 (1495)
Q Consensus 1015 ~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l 1094 (1495)
+.||++.++|++++|+++|++.++..+. .+..++..++.+++.++++++.+|.++++++.++++.+.+..+..+..++.
T Consensus 101 ~~~~~~~~~G~l~srl~~Dv~~i~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~ 179 (555)
T TIGR01194 101 IEEIDRRGAHNLIPLLTHDIDQINAFLF-IFPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKF 179 (555)
T ss_pred HHHHHhcCcchhhHHHhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998875 467777888888888899999999998877666555555555555555555
Q ss_pred HHHHHHhhhhHHHHHHHhhcchHHHHhhccHH--HHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1095 SRLVGVCKAPLIQHFAETVSGSTTIRSFDQES--RFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFL 1172 (1495)
Q Consensus 1095 ~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~--~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~ 1172 (1495)
.+......+.+.+++.|.+.|+.+||+|+.++ ...+++.+..++..+................+++..+...+.+ .
T Consensus 180 ~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 257 (555)
T TIGR01194 180 FHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLIGCAL--F 257 (555)
T ss_pred HHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Confidence 55666677889999999999999999999854 4455666666655554443322222222212222221111111 1
Q ss_pred HHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccc--c-CCC--CCCCCCcce
Q 000452 1173 ISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIE--E-SRP--NHSWPSHGK 1247 (1495)
Q Consensus 1173 ~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~--~-~~~--~~~wp~~g~ 1247 (1495)
+....+.++.|.+...+.|...+..++..+...+.+++....|.+|+.++.+.+.+++...+ + ... .+.....+.
T Consensus 258 ~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (555)
T TIGR01194 258 AAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHDKSVDS 337 (555)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccCCCCce
Confidence 11123678888888888888888999999999999999999999999999764322211100 0 000 011123468
Q ss_pred EEEeeeeEEeCCC---CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcc
Q 000452 1248 IDLRDLQVRYAPH---MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTR 1324 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~---~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~ 1324 (1495)
|+|+||+|+|++. .+++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++
T Consensus 338 i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~ 417 (555)
T TIGR01194 338 IELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRDDYRDL 417 (555)
T ss_pred EEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhh
Confidence 9999999999753 2469999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 000452 1325 LSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRK 1404 (1495)
Q Consensus 1325 isiIpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ 1404 (1495)
++++||||++|++|+|+|+. .+.+|+++++++++++++++++.+|+|+||. .+||||||||++||||++++|+
T Consensus 418 i~~v~q~~~lf~~ti~~n~~--~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRall~~~~ 490 (555)
T TIGR01194 418 FSAIFADFHLFDDLIGPDEG--EHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAWLEDRP 490 (555)
T ss_pred CcEEccChhhhhhhhhcccc--cchhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999974 3678999999999999999999999999994 7899999999999999999999
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHH-h-cCCcEEEEEecCchhhhccCEEEEEeCcEEEEe
Q 000452 1405 ILMLDEATASVDTATDNLIQQSLRQ-H-FSDCTVITIAHRITSVIDSDMVLLLSHGLIEEY 1463 (1495)
Q Consensus 1405 ILiLDEaTsslD~~Td~~Iq~~Ir~-~-f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~ 1463 (1495)
|||||||||+||++|++.|++.+.+ . .+++|+|+||||++++..||+|+||++|+++|.
T Consensus 491 ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 491 ILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999887643 3 368999999999999999999999999999985
No 48
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.5e-64 Score=645.02 Aligned_cols=545 Identities=18% Similarity=0.211 Sum_probs=438.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 292 IKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGI 371 (1495)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~ 371 (1495)
++.+++.+++.++..++..++..++..+.|++++.+++.+.+... ......++.++++..++..++.....+...+++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 94 (582)
T PRK11176 16 LWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKAD-RSVLKWMPLVVIGLMILRGITSFISSYCISWVSG 94 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566677777777777888888888899999999987764321 1111222223333444555555555566778888
Q ss_pred HHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 372 RLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELS-WYIHDPWLFLFEVALSFLILYKSLGIASVAAFFG 450 (1495)
Q Consensus 372 rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~-~~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~ 450 (1495)
++...+...+|+|.++++.....+.+.|++++++++|++++.+.. ..+..++..++.+++.+++++..-++.+++.+++
T Consensus 95 ~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~ 174 (582)
T PRK11176 95 KVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVI 174 (582)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998754 3455566777777777777666555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 451 TVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFV 530 (1495)
Q Consensus 451 ~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~ 530 (1495)
+++..++...+.+..++..++.++..++......|.++|+++||.+++|+.+.++.++.-++-.+...+..........+
T Consensus 175 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (582)
T PRK11176 175 APIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPI 254 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555556677777888888899999999999999999999999999999888877665444333333333322222222
Q ss_pred HHHHH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 000452 531 FWCAP--TFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEK 608 (1495)
Q Consensus 531 ~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~ 608 (1495)
..... ..+.++.++.+....+.+++|.+.++.+++..+..|+..+...+..+.+++.+++|+.++++.++.++.....
T Consensus 255 ~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~ 334 (582)
T PRK11176 255 IQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKRV 334 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCcC
Confidence 11111 2233445666767778899999999999999999999999999999999999999999999866543211111
Q ss_pred CCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------
Q 000452 609 QPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------ 682 (1495)
Q Consensus 609 ~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------ 682 (1495)
.......|+++|++|+|+. .++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 335 --~~~~~~~i~~~~vsf~y~~-~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~ 411 (582)
T PRK11176 335 --IERAKGDIEFRNVTFTYPG-KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYT 411 (582)
T ss_pred --CCCCCCeEEEEEEEEecCC-CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcC
Confidence 1112235999999999964 3468999999999999999999999999999999999999999999999984
Q ss_pred -------EEEEccCCcccCccHHHHHhcCCC--CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 -------KAYVAQSPWIQSGKIEDNILFGKE--MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 -------~ayv~Q~~~l~~~ti~enI~fg~~--~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
++||||+|.+|++|++|||.+|.+ +++++++++++.++++++++.+|+|.+|.+|++|.+||||||||++|
T Consensus 412 ~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~L 491 (582)
T PRK11176 412 LASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAI 491 (582)
T ss_pred HHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHH
Confidence 489999999999999999999853 78999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCC
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGT 833 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 833 (1495)
|||++++|+|+||||||||||+.+++.+++. +....+++|+|+|||+++.++.||+|++|++|++++.|+++++++.++
T Consensus 492 ARall~~~~ililDEptsaLD~~t~~~i~~~-l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~~ 570 (582)
T PRK11176 492 ARALLRDSPILILDEATSALDTESERAIQAA-LDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQNG 570 (582)
T ss_pred HHHHHhCCCEEEEECccccCCHHHHHHHHHH-HHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCCC
Confidence 9999999999999999999999999998764 455557899999999999999999999999999999999999999888
Q ss_pred chhHHHHH
Q 000452 834 DFMELVDA 841 (1495)
Q Consensus 834 ~~~~l~~~ 841 (1495)
.|.++...
T Consensus 571 ~y~~l~~~ 578 (582)
T PRK11176 571 VYAQLHKM 578 (582)
T ss_pred hHHHHHHH
Confidence 88887653
No 49
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3.9e-67 Score=661.41 Aligned_cols=449 Identities=24% Similarity=0.393 Sum_probs=348.0
Q ss_pred cEEEEeeEEEecCCC-CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCC-----CCcEEEEcC---------
Q 000452 617 AIEIADGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG--------- 681 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~-----~~G~v~~~g--------- 681 (1495)
.++++|++++|+..+ .+++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 589999999996321 25799999999999999999999999999999999999986 799998876
Q ss_pred --------eEEEEccCCc--cc-CccHHHHHhcCC----CCC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCc
Q 000452 682 --------TKAYVAQSPW--IQ-SGKIEDNILFGK----EMD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGIN 742 (1495)
Q Consensus 682 --------~~ayv~Q~~~--l~-~~ti~enI~fg~----~~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~ 742 (1495)
.++|++|+|. ++ ..|+++|+.++. ..+ .++.+++++.+++.+.. ....++..+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~~~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLTDYPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhhCCcc
Confidence 2699999985 33 358999986421 122 23445556655553211 012467889
Q ss_pred cchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCcccc-CCEEEEEeCCEE
Q 000452 743 LSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKI 819 (1495)
Q Consensus 743 LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i 819 (1495)
|||||||||+|||||+.+|+++||||||++||+...+.+.+ ++..+ . .++|+|+|||+++.+.. ||+|++|++|++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i 235 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQ-LLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRC 235 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHH-HHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999988876 44443 3 37999999999999865 999999999999
Q ss_pred EEecChHHHHhcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchhhh
Q 000452 820 TQAGKYTDVINSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQ 899 (1495)
Q Consensus 820 ~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (1495)
++.|+++++..... . .
T Consensus 236 ~~~g~~~~~~~~~~--------------------------------------------------------~--------~ 251 (529)
T PRK15134 236 VEQNRAATLFSAPT--------------------------------------------------------H--------P 251 (529)
T ss_pred EEeCCHHHHhhCCC--------------------------------------------------------C--------H
Confidence 98887765421000 0 0
Q ss_pred hhHHHHHhhcCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHH
Q 000452 900 LVQEEEREKGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFG 979 (1495)
Q Consensus 900 ~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~ 979 (1495)
.. + .++.
T Consensus 252 ~~----~-----------~~~~---------------------------------------------------------- 258 (529)
T PRK15134 252 YT----Q-----------KLLN---------------------------------------------------------- 258 (529)
T ss_pred HH----H-----------HHHH----------------------------------------------------------
Confidence 00 0 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHH
Q 000452 980 SSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVI 1059 (1495)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~ 1059 (1495)
.+
T Consensus 259 ---------------------------------~~--------------------------------------------- 260 (529)
T PRK15134 259 ---------------------------------SE--------------------------------------------- 260 (529)
T ss_pred ---------------------------------hC---------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHh
Q 000452 1060 GVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGY 1139 (1495)
Q Consensus 1060 ~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~ 1139 (1495)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 000452 1140 SRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERI 1219 (1495)
Q Consensus 1140 ~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi 1219 (1495)
+.
T Consensus 261 ------------------------------------~~------------------------------------------ 262 (529)
T PRK15134 261 ------------------------------------PS------------------------------------------ 262 (529)
T ss_pred ------------------------------------cc------------------------------------------
Confidence 00
Q ss_pred HHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCC---------CCCcceeeeeEEeeCCcEEEEEcCCCCCHHH
Q 000452 1220 FQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAP---------HMPFVLRGISCTFPGEKKTGIVGRTGSGKST 1290 (1495)
Q Consensus 1220 ~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~---------~~~~vL~~Is~~I~~GekvgIVGrTGSGKST 1290 (1495)
.++..+ .++ ....|+++|++++|.. +...+|+||||+|++||++||+|+|||||||
T Consensus 263 -----~~~~~~------~~~----~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKST 327 (529)
T PRK15134 263 -----GDPVPL------PEP----ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKST 327 (529)
T ss_pred -----cccccc------CCC----CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHH
Confidence 000000 000 0114899999999952 1246999999999999999999999999999
Q ss_pred HHHHHhccccCCccEEEEcCEeCCCCCHHH---HhcccEEEcccC--cCCCC-cHHHhcCCC---C--CCC----HHHHH
Q 000452 1291 LIQTLFRIVEPAAGQILIDGIDISLIGLHD---LRTRLSIIPQDP--VMFEG-TVRSNVDPL---E--EYT----DEQIW 1355 (1495)
Q Consensus 1291 Ll~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR~~isiIpQdp--~LF~G-TIR~NLdp~---~--~~s----d~ei~ 1355 (1495)
|+++|.|++ |++|+|.+||.++...+..+ +|++++|+||+| .+|.. |+++|+... . ..+ ++++.
T Consensus 328 Llk~l~Gl~-~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~ 406 (529)
T PRK15134 328 TGLALLRLI-NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVI 406 (529)
T ss_pred HHHHHhCcC-CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHH
Confidence 999999998 48999999999998776544 478899999998 36664 999999521 1 111 34567
Q ss_pred HHHHHcCCcH-HHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--
Q 000452 1356 EALDKCQLGD-EVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS-- 1432 (1495)
Q Consensus 1356 ~aL~~~~L~~-~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~-- 1432 (1495)
++++..++.+ ...+ ...+||||||||++|||||+.+|+||||||||++||+.+...+.+.|++..+
T Consensus 407 ~~l~~~~l~~~~~~~-----------~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~ 475 (529)
T PRK15134 407 AVMEEVGLDPETRHR-----------YPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKH 475 (529)
T ss_pred HHHHHcCCCHHHHhc-----------CCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhh
Confidence 7888888753 3322 2346999999999999999999999999999999999999999999998642
Q ss_pred CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCC
Q 000452 1433 DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKS 1474 (1495)
Q Consensus 1433 ~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~ 1474 (1495)
++|||+|+|+++.+.. ||+|++|++|++++.|+++++++++.
T Consensus 476 ~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 518 (529)
T PRK15134 476 QLAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAAPQ 518 (529)
T ss_pred CCEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcCCC
Confidence 7899999999999875 99999999999999999999986543
No 50
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=5.2e-64 Score=641.27 Aligned_cols=544 Identities=20% Similarity=0.249 Sum_probs=448.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 292 IKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGI 371 (1495)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~ 371 (1495)
+..+++.+++.+++..++.++..++....|++++.+++....... ...-+.++++++++.++..++.....+...+.+.
T Consensus 5 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (571)
T TIGR02203 5 LWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD-RSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSN 83 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344667788889999999999999999999999999986543321 1222233333444555556666666677788899
Q ss_pred HHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 372 RLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIASVAAFFG 450 (1495)
Q Consensus 372 rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~ 450 (1495)
++...+...+|+|.++.+.....+.+.|+++|+++.|++++.+++. .+..++...+.+++++++++..-++.+++.+++
T Consensus 84 ~~~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~ 163 (571)
T TIGR02203 84 KVVRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVM 163 (571)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999999988999999999999999999998654 455666666677777776666555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 451 TVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFV 530 (1495)
Q Consensus 451 ~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~ 530 (1495)
+++.+.+...+.+..++..++..+..+++.+.++|.++|+++||.++.|+.+.++.++..++..+...+..........+
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (571)
T TIGR02203 164 LPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPI 243 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666667778888888999999999999999999999999999999999988888777666555444443333333332
Q ss_pred HHHHHH--HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 000452 531 FWCAPT--FVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEK 608 (1495)
Q Consensus 531 ~~~~p~--~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~ 608 (1495)
...... .+.++.++.+.+..+.+|+|.+++++.++..+..|+..+...+..+.+++++.+|+.++++.++..+....
T Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~- 322 (571)
T TIGR02203 244 TQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTR- 322 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-
Confidence 222222 23345566777778899999999999999999999999999999999999999999999986654332111
Q ss_pred CCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------
Q 000452 609 QPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------ 682 (1495)
Q Consensus 609 ~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------ 682 (1495)
+.......++++|++|+|+.. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 323 -~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~ 400 (571)
T TIGR02203 323 -AIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYT 400 (571)
T ss_pred -CCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcC
Confidence 111123469999999999743 468999999999999999999999999999999999999999999999983
Q ss_pred -------EEEEccCCcccCccHHHHHhcCC--CCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 -------KAYVAQSPWIQSGKIEDNILFGK--EMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 -------~ayv~Q~~~l~~~ti~enI~fg~--~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
++||||+|++|++|++|||.++. +.+++++.++++.|+++++++.+|+|.+|.+|++|.+||||||||++|
T Consensus 401 ~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaL 480 (571)
T TIGR02203 401 LASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAI 480 (571)
T ss_pred HHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHH
Confidence 69999999999999999999986 488999999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCC
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGT 833 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 833 (1495)
|||++++|+|+|||||||+||+++++++.+. +....+++|+|+|||+.+.+..||+|++|++|++++.|+++++++.+.
T Consensus 481 ARall~~~~illLDEpts~LD~~~~~~i~~~-L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~~ 559 (571)
T TIGR02203 481 ARALLKDAPILILDEATSALDNESERLVQAA-LERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARNG 559 (571)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcCC
Confidence 9999999999999999999999999999765 455567899999999999999999999999999999999999998777
Q ss_pred chhHHHH
Q 000452 834 DFMELVD 840 (1495)
Q Consensus 834 ~~~~l~~ 840 (1495)
.|.++..
T Consensus 560 ~~~~~~~ 566 (571)
T TIGR02203 560 LYAQLHN 566 (571)
T ss_pred HHHHHHH
Confidence 7776654
No 51
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-67 Score=655.03 Aligned_cols=439 Identities=23% Similarity=0.358 Sum_probs=340.3
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCC--CCcEEEEcCe------------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK--ISGTLKLCGT------------ 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~--~~G~v~~~g~------------ 682 (1495)
.++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++| ++|+|.++|.
T Consensus 5 ~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFG---GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeC---CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 589999999995 35799999999999999999999999999999999999996 8999999872
Q ss_pred --EEEEccCCcccC-ccHHHHHhcCCCC------CHH----HHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHH
Q 000452 683 --KAYVAQSPWIQS-GKIEDNILFGKEM------DRE----RYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQ 749 (1495)
Q Consensus 683 --~ayv~Q~~~l~~-~ti~enI~fg~~~------~~~----~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 749 (1495)
++|++|++.++. .|++||+.++... +.+ +.+++++..++. ........+|||||||
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgGqkq 150 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLD-----------INPATPVGNLGLGQQQ 150 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCC-----------CCcccchhhCCHHHHH
Confidence 699999987764 5999999987431 221 223333333321 1234677899999999
Q ss_pred HHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHH
Q 000452 750 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDV 828 (1495)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 828 (1495)
|++||||++.+|+++||||||++||+.....+++.+.....+++|+|++||+++++.. ||++++|++|+++..|+.+++
T Consensus 151 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 230 (506)
T PRK13549 151 LVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGM 230 (506)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccC
Confidence 9999999999999999999999999999888876433333458999999999999865 999999999999876643211
Q ss_pred HhcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchhhhhhHHHHHhh
Q 000452 829 INSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQLVQEEEREK 908 (1495)
Q Consensus 829 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 908 (1495)
.. .+..
T Consensus 231 ~~-------------------------------------------------------------------~~~~------- 236 (506)
T PRK13549 231 TE-------------------------------------------------------------------DDII------- 236 (506)
T ss_pred CH-------------------------------------------------------------------HHHH-------
Confidence 00 0000
Q ss_pred cCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 000452 909 GKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARS 988 (1495)
Q Consensus 909 g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~ 988 (1495)
... .. .
T Consensus 237 ------------~~~------------------------------~~-----~--------------------------- 242 (506)
T PRK13549 237 ------------TMM------------------------------VG-----R--------------------------- 242 (506)
T ss_pred ------------HHh------------------------------hC-----c---------------------------
Confidence 000 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 989 TLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQ 1068 (1495)
Q Consensus 989 ~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1495)
+.
T Consensus 243 -------------------------~~----------------------------------------------------- 244 (506)
T PRK13549 243 -------------------------EL----------------------------------------------------- 244 (506)
T ss_pred -------------------------Cc-----------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHH
Q 000452 1069 VFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAA 1148 (1495)
Q Consensus 1069 ~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~ 1148 (1495)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCC
Q 000452 1149 AMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSE 1228 (1495)
Q Consensus 1149 ~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E 1228 (1495)
. + . .|.+
T Consensus 245 --------------------------------~------------------------------------~---~--~~~~ 251 (506)
T PRK13549 245 --------------------------------T------------------------------------A---L--YPRE 251 (506)
T ss_pred --------------------------------c------------------------------------c---c--cccc
Confidence 0 0 0 0000
Q ss_pred CCCccccCCCCCCCCCcceEEEeeeeEEeCC-CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-CCccEE
Q 000452 1229 PPLEIEESRPNHSWPSHGKIDLRDLQVRYAP-HMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-PAAGQI 1306 (1495)
Q Consensus 1229 ~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~-~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-p~~G~I 1306 (1495)
++ + +....|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|
T Consensus 252 ~~-------~----~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i 320 (506)
T PRK13549 252 PH-------T----IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEI 320 (506)
T ss_pred cc-------C----CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEE
Confidence 00 0 11125999999999953 22359999999999999999999999999999999999998 599999
Q ss_pred EEcCEeCCCCCH-HHHhcccEEEcccC---cCCC-CcHHHhcCCC--CC------CC----HHHHHHHHHHcCCc-HHHH
Q 000452 1307 LIDGIDISLIGL-HDLRTRLSIIPQDP---VMFE-GTVRSNVDPL--EE------YT----DEQIWEALDKCQLG-DEVR 1368 (1495)
Q Consensus 1307 ~IDG~dI~~i~l-~~LR~~isiIpQdp---~LF~-GTIR~NLdp~--~~------~s----d~ei~~aL~~~~L~-~~v~ 1368 (1495)
.+||.|+...+. +..|.+++|+||+| .+|. -|+.+|+... .. .+ .+++.++++++++. +.
T Consensus 321 ~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-- 398 (506)
T PRK13549 321 FIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTAS-- 398 (506)
T ss_pred EECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCC--
Confidence 999999875543 44678899999997 3665 5999999631 11 12 13466777777763 22
Q ss_pred hccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhh
Q 000452 1369 KKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVI 1447 (1495)
Q Consensus 1369 ~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~ 1447 (1495)
.|.+ ...||||||||++||||++.+|+||||||||++||+.+...+.+.|++.. +++|||+|||+++.+.
T Consensus 399 -----~~~~----~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~ 469 (506)
T PRK13549 399 -----PELA----IARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVL 469 (506)
T ss_pred -----cccc----cccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHH
Confidence 2222 34799999999999999999999999999999999999999999998753 4789999999999987
Q ss_pred c-cCEEEEEeCcEEEEecChhHHh
Q 000452 1448 D-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1448 ~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
. ||+|++|++|+++..|+++++.
T Consensus 470 ~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 470 GLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred HhCCEEEEEECCEEEEEeccccCC
Confidence 5 9999999999999999988764
No 52
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-66 Score=654.79 Aligned_cols=437 Identities=22% Similarity=0.336 Sum_probs=338.0
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC--------------e
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------T 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--------------~ 682 (1495)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++| .
T Consensus 5 ~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFG---PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 589999999995 35799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEccCCcccC-ccHHHHHhcCCC----------CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHH
Q 000452 683 KAYVAQSPWIQS-GKIEDNILFGKE----------MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQ 747 (1495)
Q Consensus 683 ~ayv~Q~~~l~~-~ti~enI~fg~~----------~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 747 (1495)
++|++|++.++. .|++||+.++.. .+. ++..++++.+++.+ .......+|||||
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgG~ 150 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKV-----------DLDEKVANLSISH 150 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCC-----------CcccchhhCCHHH
Confidence 699999987765 599999987632 011 12233344443321 2346778999999
Q ss_pred HHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChH
Q 000452 748 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 826 (1495)
||||+|||||+.+|+++||||||++||+.+...+.+.+.....+|+|+|++||+++++.. ||++++|++|++++.|+++
T Consensus 151 ~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (510)
T PRK09700 151 KQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVS 230 (510)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchh
Confidence 999999999999999999999999999999988876443333458999999999999875 9999999999998877654
Q ss_pred HHHhcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchhhhhhHHHHH
Q 000452 827 DVINSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQLVQEEER 906 (1495)
Q Consensus 827 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 906 (1495)
++... +..+
T Consensus 231 ~~~~~-------------------------------------------------------------------~~~~---- 239 (510)
T PRK09700 231 DVSND-------------------------------------------------------------------DIVR---- 239 (510)
T ss_pred hCCHH-------------------------------------------------------------------HHHH----
Confidence 32100 0000
Q ss_pred hhcCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHH
Q 000452 907 EKGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILA 986 (1495)
Q Consensus 907 ~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~ 986 (1495)
...+. . ..
T Consensus 240 ---------------~~~~~----------------------------~----~~------------------------- 247 (510)
T PRK09700 240 ---------------LMVGR----------------------------E----LQ------------------------- 247 (510)
T ss_pred ---------------HhcCC----------------------------C----cc-------------------------
Confidence 00000 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 987 RSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVA 1066 (1495)
Q Consensus 987 ~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 1066 (1495)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHH
Q 000452 1067 WQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHV 1146 (1495)
Q Consensus 1067 ~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~ 1146 (1495)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCC
Q 000452 1147 AAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIP 1226 (1495)
Q Consensus 1147 ~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~ 1226 (1495)
. + +...+
T Consensus 248 ------------------------------~----------------------------------------~---~~~~~ 254 (510)
T PRK09700 248 ------------------------------N----------------------------------------R---FNAMK 254 (510)
T ss_pred ------------------------------c----------------------------------------c---ccccc
Confidence 0 0 00000
Q ss_pred CCCCCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEE
Q 000452 1227 SEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQI 1306 (1495)
Q Consensus 1227 ~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I 1306 (1495)
...+ ++ +....|+++|++++|. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|
T Consensus 255 ~~~~-------~~---~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I 320 (510)
T PRK09700 255 ENVS-------NL---AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEI 320 (510)
T ss_pred cccc-------cC---CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeE
Confidence 0000 00 0112599999998763 28999999999999999999999999999999999999999999
Q ss_pred EEcCEeCCCCCH-HHHhcccEEEcccC---cCCCC-cHHHhcCCCCC------------CC----HHHHHHHHHHcCCc-
Q 000452 1307 LIDGIDISLIGL-HDLRTRLSIIPQDP---VMFEG-TVRSNVDPLEE------------YT----DEQIWEALDKCQLG- 1364 (1495)
Q Consensus 1307 ~IDG~dI~~i~l-~~LR~~isiIpQdp---~LF~G-TIR~NLdp~~~------------~s----d~ei~~aL~~~~L~- 1364 (1495)
.+||.++...+. ..+|++++|+||+| .+|.+ |+++|+..... .+ .+++.+++++.++.
T Consensus 321 ~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 400 (510)
T PRK09700 321 RLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKC 400 (510)
T ss_pred EECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCC
Confidence 999999876543 45788999999984 57765 99999863211 01 12356677777663
Q ss_pred HHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCc
Q 000452 1365 DEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRI 1443 (1495)
Q Consensus 1365 ~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl 1443 (1495)
+. .+.++ ..||||||||++|||||+++|+||||||||++||..+...+.+.|++.. .+.|||+|+|++
T Consensus 401 ~~-------~~~~~----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~ 469 (510)
T PRK09700 401 HS-------VNQNI----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSEL 469 (510)
T ss_pred CC-------ccCcc----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 22 23333 4699999999999999999999999999999999999999999998753 478999999999
Q ss_pred hhhh-ccCEEEEEeCcEEEEecChhH
Q 000452 1444 TSVI-DSDMVLLLSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1444 ~ti~-~~DrIlVL~~G~ivE~gsp~~ 1468 (1495)
+.+. .||+|++|++|++++.+++.+
T Consensus 470 ~~~~~~~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 470 PEIITVCDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred HHHHhhCCEEEEEECCEEEEEecCcc
Confidence 9876 499999999999999887733
No 53
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=6.8e-66 Score=702.44 Aligned_cols=249 Identities=19% Similarity=0.257 Sum_probs=203.7
Q ss_pred HHHHHHHhhHHHHHHHHh--cCCCCCCCccccCCCCCCCCCcc--eEEEeeeeEEeC--CCCCcceeeeeEEeeCCcEEE
Q 000452 1206 ACQMENKIISVERIFQYT--CIPSEPPLEIEESRPNHSWPSHG--KIDLRDLQVRYA--PHMPFVLRGISCTFPGEKKTG 1279 (1495)
Q Consensus 1206 ~~~le~~~~sveRi~~~~--~~~~E~~~~~~~~~~~~~wp~~g--~I~f~nv~~~Y~--~~~~~vL~~Is~~I~~Gekvg 1279 (1495)
..+.|+++.++||..+|. +.+.|.+.......++. ..| .++++||+++|+ ++.+.+|+|||++|+|||++|
T Consensus 717 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 793 (1394)
T TIGR00956 717 GETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEK---ESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTA 793 (1394)
T ss_pred ccccccccccccccccCCCCccccccccccccccccc---cCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEE
Confidence 356777888999998873 34444433222221221 134 479999999995 334579999999999999999
Q ss_pred EEcCCCCCHHHHHHHHhcccc---CCccEEEEcCEeCCCCCHHHHhcccEEEcccCcC-CCCcHHHhcCCC------CCC
Q 000452 1280 IVGRTGSGKSTLIQTLFRIVE---PAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVM-FEGTVRSNVDPL------EEY 1349 (1495)
Q Consensus 1280 IVGrTGSGKSTLl~~L~rl~e---p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~L-F~GTIR~NLdp~------~~~ 1349 (1495)
|+||||||||||+++|.|+.+ |++|+|.+||.++. .++|++++||||++.+ +..||||||+.. .+.
T Consensus 794 I~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~ 869 (1394)
T TIGR00956 794 LMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSV 869 (1394)
T ss_pred EECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCC
Confidence 999999999999999999998 78899999999985 3578999999999764 567999999731 134
Q ss_pred CHH----HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC-eEEEEcCCCCCCHHHHHHHH
Q 000452 1350 TDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRK-ILMLDEATASVDTATDNLIQ 1424 (1495)
Q Consensus 1350 sd~----ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~-ILiLDEaTsslD~~Td~~Iq 1424 (1495)
+++ .+.++++..++.+ ..|+.+++.|.+||||||||++|||||+.+|+ ||+||||||+||+.+...|+
T Consensus 870 ~~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~ 942 (1394)
T TIGR00956 870 SKSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSIC 942 (1394)
T ss_pred CHHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHH
Confidence 443 3567788777643 46889999889999999999999999999997 99999999999999999999
Q ss_pred HHHHHh-cCCcEEEEEecCchhh--hccCEEEEEeCc-EEEEecChhH
Q 000452 1425 QSLRQH-FSDCTVITIAHRITSV--IDSDMVLLLSHG-LIEEYDSPRK 1468 (1495)
Q Consensus 1425 ~~Ir~~-f~~~TVI~IAHRl~ti--~~~DrIlVL~~G-~ivE~gsp~~ 1468 (1495)
+.|++. .+++|||+++|++++. ..||+|++|++| +++++|++.+
T Consensus 943 ~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 943 KLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 999987 4689999999999974 569999999997 9999999743
No 54
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.1e-63 Score=634.25 Aligned_cols=543 Identities=20% Similarity=0.229 Sum_probs=426.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 292 IKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENE-GYALVSAFCVAKLVECLCQRFFVFRLEQLG 370 (1495)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~-g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g 370 (1495)
+..+++.+++.++...++.++..++..+.|+++..+++.+......... ...+++++++..++..++.....+...+.+
T Consensus 14 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (592)
T PRK10790 14 LLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAA 93 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345566777788888889999999999999999999976543221111 122233344444556666666677778889
Q ss_pred HHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 371 IRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWYI-HDPWLFLFEVALSFLILYKSLGIASVAAFF 449 (1495)
Q Consensus 371 ~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~-~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~ 449 (1495)
.++...+...+|+|.++++.....+.+.|+++|++++|++.+.+++... ..+....+.+++++.+++..-.+.+++.++
T Consensus 94 ~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~ 173 (592)
T PRK10790 94 VGVVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIM 173 (592)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999899999999999999999999865543 333334343444444443332233333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Q 000452 450 GTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSIT-- 527 (1495)
Q Consensus 450 ~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~-- 527 (1495)
++.+.+.+..+..+..++..++..+..++..+...|.++|+++||.|+.|+.+.+++.+..++..+...+........
T Consensus 174 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (592)
T PRK10790 174 IFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLR 253 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444555666677777777888888899999999999999999999999888776554333322222211110
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 000452 528 --SFVFWCAPTFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDL 605 (1495)
Q Consensus 528 --~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~ 605 (1495)
..+......++ ++..+.+ ...+.++.+.+++++.++..+..|+..++.....+.+++.+.+||.++++.++.+...
T Consensus 254 ~~~~~~~~~~~~~-~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~ 331 (592)
T PRK10790 254 PLLSLFSALILCG-LLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGN 331 (592)
T ss_pred HHHHHHHHHHHHH-HHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCC
Confidence 11111111111 1122223 3567799999999999999999999999999999999999999999999865432221
Q ss_pred ccCCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe---
Q 000452 606 VEKQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--- 682 (1495)
Q Consensus 606 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--- 682 (1495)
. ..+ .....|+++|++|+|+. ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.+||.
T Consensus 332 ~-~~~--~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~ 406 (592)
T PRK10790 332 D-DRP--LQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLS 406 (592)
T ss_pred C-ccC--CCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhh
Confidence 1 111 12246999999999973 357999999999999999999999999999999999999999999999984
Q ss_pred ----------EEEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHH
Q 000452 683 ----------KAYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQ 752 (1495)
Q Consensus 683 ----------~ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 752 (1495)
++||||+|++|++|++|||.+|.+.++++..++++.++++++++.+|+|.+|.+|++|.+||||||||++
T Consensus 407 ~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRia 486 (592)
T PRK10790 407 SLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLA 486 (592)
T ss_pred hCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHH
Confidence 6999999999999999999999988999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcC
Q 000452 753 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
||||++++|+|+|||||||+||+++++++.+. +....+++|+|+|||+++.++.||+|++|++|++++.|+++|+++.+
T Consensus 487 lARaLl~~~~illlDEpts~LD~~t~~~i~~~-l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~ 565 (592)
T PRK10790 487 LARVLVQTPQILILDEATANIDSGTEQAIQQA-LAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQ 565 (592)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 99999999999999999999999999988654 55556789999999999999999999999999999999999999988
Q ss_pred CchhHHHHHH
Q 000452 833 TDFMELVDAH 842 (1495)
Q Consensus 833 ~~~~~l~~~~ 842 (1495)
+.|.++....
T Consensus 566 ~~y~~l~~~~ 575 (592)
T PRK10790 566 GRYWQMYQLQ 575 (592)
T ss_pred CHHHHHHHHH
Confidence 8898887654
No 55
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.9e-66 Score=652.64 Aligned_cols=437 Identities=25% Similarity=0.402 Sum_probs=341.6
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCC--CCCCcEEEEc---------------
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEV--PKISGTLKLC--------------- 680 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~--~~~~G~v~~~--------------- 680 (1495)
++++|++++|. ++++|+|+||++++|++++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFD---GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEEC---CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 46899999995 357999999999999999999999999999999999997 7999999885
Q ss_pred --------C-----------------------eEEEEccC-CcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhC
Q 000452 681 --------G-----------------------TKAYVAQS-PWIQS-GKIEDNILFGKE---MD----RERYNAVLDACS 720 (1495)
Q Consensus 681 --------g-----------------------~~ayv~Q~-~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~ 720 (1495)
| .++|++|+ +.++. .|++||+.++.. .+ +++..++++.++
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g 157 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIEMVQ 157 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC
Confidence 1 26899997 55554 699999987531 22 234555666666
Q ss_pred cHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEE
Q 000452 721 LEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYV 798 (1495)
Q Consensus 721 l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlv 798 (1495)
+++.. .+...+|||||||||+|||||+.+|+++||||||++||+.+.+.+.+. +..+ . .|+|||+|
T Consensus 158 l~~~~-----------~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tviiv 225 (520)
T TIGR03269 158 LSHRI-----------THIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA-LEEAVKASGISMVLT 225 (520)
T ss_pred Chhhh-----------hcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEE
Confidence 64332 356789999999999999999999999999999999999999988764 4443 3 37999999
Q ss_pred ecCCCcccc-CCEEEEEeCCEEEEecChHHHHhcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccc
Q 000452 799 THQVEFLPA-ADLVLVIKDGKITQAGKYTDVINSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVV 877 (1495)
Q Consensus 799 TH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 877 (1495)
||+++++.. ||+|++|++|+++..|+++++...
T Consensus 226 tHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~---------------------------------------------- 259 (520)
T TIGR03269 226 SHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV---------------------------------------------- 259 (520)
T ss_pred eCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH----------------------------------------------
Confidence 999999865 999999999999876654332100
Q ss_pred cccccccccccccccccchhhhhhHHHHHhhcCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccC
Q 000452 878 KEVENKEVQNDREDKVAEPQRQLVQEEEREKGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPAS 957 (1495)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~ 957 (1495)
|.. . +.
T Consensus 260 -----------------------------------------~~~---~---------------------------~~--- 265 (520)
T TIGR03269 260 -----------------------------------------FME---G---------------------------VS--- 265 (520)
T ss_pred -----------------------------------------HHh---h---------------------------ch---
Confidence 000 0 00
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHH
Q 000452 958 KDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAV 1037 (1495)
Q Consensus 958 ~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~v 1037 (1495)
T Consensus 266 -------------------------------------------------------------------------------- 265 (520)
T TIGR03269 266 -------------------------------------------------------------------------------- 265 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchH
Q 000452 1038 DLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGST 1117 (1495)
Q Consensus 1038 d~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~ 1117 (1495)
T Consensus 266 -------------------------------------------------------------------------------- 265 (520)
T TIGR03269 266 -------------------------------------------------------------------------------- 265 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 000452 1118 TIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNN 1197 (1495)
Q Consensus 1118 tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~ 1197 (1495)
T Consensus 266 -------------------------------------------------------------------------------- 265 (520)
T TIGR03269 266 -------------------------------------------------------------------------------- 265 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCC---CCCcceeeeeEEeeC
Q 000452 1198 LQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAP---HMPFVLRGISCTFPG 1274 (1495)
Q Consensus 1198 ~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~---~~~~vL~~Is~~I~~ 1274 (1495)
.++ . +... +. ....++++|++++|.. +..++|+|+||+|++
T Consensus 266 ----------~~~-------~-------~~~~--------~~----~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~ 309 (520)
T TIGR03269 266 ----------EVE-------K-------ECEV--------EV----GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKE 309 (520)
T ss_pred ----------hhc-------c-------cccc--------CC----CCceEEEeccEEEeccCCCCCceEEeeEEEEEcC
Confidence 000 0 0000 00 1125999999999953 234699999999999
Q ss_pred CcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEc-CE---eCCCCC---HHHHhcccEEEcccCcCCCC-cHHHhcCC-
Q 000452 1275 EKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILID-GI---DISLIG---LHDLRTRLSIIPQDPVMFEG-TVRSNVDP- 1345 (1495)
Q Consensus 1275 GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~ID-G~---dI~~i~---l~~LR~~isiIpQdp~LF~G-TIR~NLdp- 1345 (1495)
||++||+|+||||||||+++|.|+++|++|+|.++ |. ++...+ ...+|++++|+||+|.+|.. |+++|+..
T Consensus 310 Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~ 389 (520)
T TIGR03269 310 GEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEA 389 (520)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999996 64 344433 23567889999999988875 99999952
Q ss_pred CC-CC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHH
Q 000452 1346 LE-EY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATD 1420 (1495)
Q Consensus 1346 ~~-~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td 1420 (1495)
.. .. .++++.++++.+++.+.- .++-++.+ ...||||||||++|||||+.+|+||||||||++||+.+.
T Consensus 390 ~~~~~~~~~~~~~~~~~l~~~~l~~~~--~~~~~~~~----~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~ 463 (520)
T TIGR03269 390 IGLELPDELARMKAVITLKMVGFDEEK--AEEILDKY----PDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITK 463 (520)
T ss_pred HHcCCCHHHHHHHHHHHHHhCCCCCcc--chhhhhCC----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHH
Confidence 11 11 224567788888875310 00011222 346999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1421 NLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1421 ~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
..+.+.|++..+ +.|||+|+|+++.+.. ||+|++|++|++++.|+|+++.+
T Consensus 464 ~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 464 VDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred HHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 999999988642 7899999999999875 99999999999999999988764
No 56
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=3e-63 Score=634.66 Aligned_cols=549 Identities=21% Similarity=0.258 Sum_probs=434.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 290 KLIKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQL 369 (1495)
Q Consensus 290 ~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 369 (1495)
+.++.+++.+++.+.+..++.++..++.++.|++++.+++.+-...... ....+++.+++..++..+......+...++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (576)
T TIGR02204 7 AALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSG-LLNRYFAFLLVVALVLALGTAARFYLVTWL 85 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566777888888888999999999999999999999743222111 112222223333344455556666777889
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 370 GIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIASVAAF 448 (1495)
Q Consensus 370 g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl 448 (1495)
+.++...+...+|+|.++++....++.+.|+++|++++|++.+.+++. .+..++...+.+++++++++..-.+.+++.+
T Consensus 86 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 165 (576)
T TIGR02204 86 GERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVL 165 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 999999999999999999999888889999999999999999988753 3444455555555555555443333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 449 FGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITS 528 (1495)
Q Consensus 449 ~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~ 528 (1495)
+.+++...+..++.+..++..++.++..+++.+...|.++|+++||.+++|+.+.+++.+..++..+...+.........
T Consensus 166 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (576)
T TIGR02204 166 LAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLT 245 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333334445577777888889999999999999999999999999999999888887766654444333333222222
Q ss_pred HHHH--HHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 000452 529 FVFW--CAPTFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLV 606 (1495)
Q Consensus 529 ~~~~--~~p~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~ 606 (1495)
.+.. .....+..+.++.+.+..+.++.+.++++..++..+..|+..++..+..+.+++++++||.++++.++..+...
T Consensus 246 ~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~ 325 (576)
T TIGR02204 246 AIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPA 325 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCC
Confidence 2111 11223344456777777889999999999999999999999999999999999999999999998654321111
Q ss_pred cC-CCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC----
Q 000452 607 EK-QPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---- 681 (1495)
Q Consensus 607 ~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g---- 681 (1495)
.. .+.......|+++|++|+|+..+++++|+|+||++++||+++|+|+||||||||+++|+|+++|.+|+|.+||
T Consensus 326 ~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~ 405 (576)
T TIGR02204 326 HPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLR 405 (576)
T ss_pred CCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHH
Confidence 11 0111122469999999999753336899999999999999999999999999999999999999999999998
Q ss_pred ---------eEEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHH
Q 000452 682 ---------TKAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRI 751 (1495)
Q Consensus 682 ---------~~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 751 (1495)
.++|+||+|+++++|++|||.+|.+ .++++..++++.+++.++++.+|.|++|.+|++|.+||||||||+
T Consensus 406 ~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl 485 (576)
T TIGR02204 406 QLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRI 485 (576)
T ss_pred hcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHH
Confidence 3699999999999999999999875 578889999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000452 752 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
+||||++++|+++|||||||+||+++++.+++. +....+++|+|+|||+++.++.||+|++|++|++++.|+++++.+.
T Consensus 486 ~laRal~~~~~ililDEpts~lD~~~~~~i~~~-l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~~ 564 (576)
T TIGR02204 486 AIARAILKDAPILLLDEATSALDAESEQLVQQA-LETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIAK 564 (576)
T ss_pred HHHHHHHhCCCeEEEeCcccccCHHHHHHHHHH-HHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHHc
Confidence 999999999999999999999999998887654 5555678999999999999999999999999999999999999888
Q ss_pred CCchhHHHH
Q 000452 832 GTDFMELVD 840 (1495)
Q Consensus 832 ~~~~~~l~~ 840 (1495)
+..|.++..
T Consensus 565 ~~~~~~l~~ 573 (576)
T TIGR02204 565 GGLYARLAR 573 (576)
T ss_pred CChHHHHHh
Confidence 777777653
No 57
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.3e-65 Score=643.66 Aligned_cols=447 Identities=23% Similarity=0.355 Sum_probs=344.4
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------- 682 (1495)
.++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|.|+++|++|+|.++|.
T Consensus 11 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYS---GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 599999999995 357999999999999999999999999999999999999999999999872
Q ss_pred EEEEccCCcccC-ccHHHHHhcCCCCC---HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhc
Q 000452 683 KAYVAQSPWIQS-GKIEDNILFGKEMD---RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALY 758 (1495)
Q Consensus 683 ~ayv~Q~~~l~~-~ti~enI~fg~~~~---~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 758 (1495)
++|++|++.++. .|++||+.++.... +++.+++++.+++... ...+..+|||||||||+|||||+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la~aL~ 156 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLD-----------LDSSAGSLEVADRQIVEILRGLM 156 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCcc-----------ccCChhhCCHHHHHHHHHHHHHH
Confidence 689999987765 59999999875322 2344555555555321 24667899999999999999999
Q ss_pred cCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhcCCchhH
Q 000452 759 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINSGTDFME 837 (1495)
Q Consensus 759 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 837 (1495)
.+|+++||||||++||+...+.+.+.+.....+|+|+|++||+++++.. ||+|++|++|++++.|+++++... +
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-----~ 231 (510)
T PRK15439 157 RDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTD-----D 231 (510)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHH-----H
Confidence 9999999999999999999988876443333458999999999999865 999999999999988877654211 0
Q ss_pred HHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchhhhhhHHHHHhhcCchHHHHH
Q 000452 838 LVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQLVQEEEREKGKVEFSVYW 917 (1495)
Q Consensus 838 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~ 917 (1495)
....
T Consensus 232 ~~~~---------------------------------------------------------------------------- 235 (510)
T PRK15439 232 IIQA---------------------------------------------------------------------------- 235 (510)
T ss_pred HHHH----------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 918 KYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYK 997 (1495)
Q Consensus 918 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~ 997 (1495)
+..... ... ..+.
T Consensus 236 -~~~~~~----------------------------~~~----~~~~---------------------------------- 248 (510)
T PRK15439 236 -ITPAAR----------------------------EKS----LSAS---------------------------------- 248 (510)
T ss_pred -HhCccc----------------------------ccc----cccc----------------------------------
Confidence 000000 000 0000
Q ss_pred HHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 998 TATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVI 1077 (1495)
Q Consensus 998 ~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~ 1077 (1495)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHH
Q 000452 1078 ATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRL 1157 (1495)
Q Consensus 1078 ~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl 1157 (1495)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCC
Q 000452 1158 DMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESR 1237 (1495)
Q Consensus 1158 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~ 1237 (1495)
.+. . ...|...+ .
T Consensus 249 -----------------------------------------------------------~~~-~-~~~~~~~~------~ 261 (510)
T PRK15439 249 -----------------------------------------------------------QKL-W-LELPGNRR------Q 261 (510)
T ss_pred -----------------------------------------------------------ccc-c-cccccccc------c
Confidence 000 0 00000000 0
Q ss_pred CCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCC
Q 000452 1238 PNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG 1317 (1495)
Q Consensus 1238 ~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~ 1317 (1495)
++ +..-.|+++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+
T Consensus 262 ~~---~~~~~l~~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~ 331 (510)
T PRK15439 262 QA---AGAPVLTVEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALS 331 (510)
T ss_pred cC---CCCceEEEeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCC
Confidence 00 0112589999983 1699999999999999999999999999999999999999999999999998877
Q ss_pred HHH-HhcccEEEcccC---cCCCC-cHHHhcCCC-----C---CC--CHHHHHHHHHHcCCcHHHHhccCCcccccccCC
Q 000452 1318 LHD-LRTRLSIIPQDP---VMFEG-TVRSNVDPL-----E---EY--TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENG 1382 (1495)
Q Consensus 1318 l~~-LR~~isiIpQdp---~LF~G-TIR~NLdp~-----~---~~--sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G 1382 (1495)
... .|.+++|+||+| .+|.. |+++|+... . .. .++++.++++..++.. ...+.+ .
T Consensus 332 ~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~----~ 401 (510)
T PRK15439 332 TAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKF------NHAEQA----A 401 (510)
T ss_pred HHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCC------CCccCc----c
Confidence 654 467899999996 36655 999998421 1 00 1223556677766531 123333 3
Q ss_pred CCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEE
Q 000452 1383 ENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLI 1460 (1495)
Q Consensus 1383 ~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~i 1460 (1495)
..||||||||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|++
T Consensus 402 ~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i 481 (510)
T PRK15439 402 RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEI 481 (510)
T ss_pred ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 4699999999999999999999999999999999999999999998864 47999999999999976 999999999999
Q ss_pred EEecChhHHhhc
Q 000452 1461 EEYDSPRKLLEN 1472 (1495)
Q Consensus 1461 vE~gsp~~Ll~~ 1472 (1495)
+..|+++++.++
T Consensus 482 ~~~~~~~~~~~~ 493 (510)
T PRK15439 482 SGALTGAAINVD 493 (510)
T ss_pred EEEEccccCCHH
Confidence 999999887643
No 58
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=6.4e-66 Score=646.15 Aligned_cols=433 Identities=20% Similarity=0.315 Sum_probs=336.5
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------- 682 (1495)
.++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 4 ~i~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFP---GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeC---CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 589999999995 357999999999999999999999999999999999999999999999872
Q ss_pred EEEEccCCcccC-ccHHHHHhcCCC-------CCHH----HHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHH
Q 000452 683 KAYVAQSPWIQS-GKIEDNILFGKE-------MDRE----RYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQR 750 (1495)
Q Consensus 683 ~ayv~Q~~~l~~-~ti~enI~fg~~-------~~~~----~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 750 (1495)
++|++|++.++. .|++||+.++.. ++.. +..++++.+++. + .......+||||||||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~---------~--~~~~~~~~LSgG~~qr 149 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLR---------F--SSDKLVGELSIGEQQM 149 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCC---------C--CccCchhhCCHHHHHH
Confidence 689999987664 599999998643 1221 223334433332 1 1246678999999999
Q ss_pred HHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHH
Q 000452 751 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVI 829 (1495)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 829 (1495)
++|||||+.+|+++||||||++||+.+...+.+.+.....+++|+|++||+++++.. ||+|++|++|+++..|+.+++.
T Consensus 150 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (501)
T PRK10762 150 VEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLT 229 (501)
T ss_pred HHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCC
Confidence 999999999999999999999999999888875433323357899999999999865 9999999999998765432110
Q ss_pred hcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchhhhhhHHHHHhhc
Q 000452 830 NSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQLVQEEEREKG 909 (1495)
Q Consensus 830 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g 909 (1495)
. ++..
T Consensus 230 ~------------------------------------------------------------------------~~~~--- 234 (501)
T PRK10762 230 E------------------------------------------------------------------------DSLI--- 234 (501)
T ss_pred H------------------------------------------------------------------------HHHH---
Confidence 0 0000
Q ss_pred CchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 000452 910 KVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARST 989 (1495)
Q Consensus 910 ~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~ 989 (1495)
... +.. .
T Consensus 235 -----------~~~-----------------------------~~~-----~---------------------------- 241 (501)
T PRK10762 235 -----------EMM-----------------------------VGR-----K---------------------------- 241 (501)
T ss_pred -----------HHh-----------------------------cCC-----C----------------------------
Confidence 000 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 990 LLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQV 1069 (1495)
Q Consensus 990 ~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1495)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHH
Q 000452 1070 FIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAA 1149 (1495)
Q Consensus 1070 ~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~ 1149 (1495)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCC
Q 000452 1150 MEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEP 1229 (1495)
Q Consensus 1150 ~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~ 1229 (1495)
. + ..++..
T Consensus 242 ------------------------------~------------------------------------~------~~~~~~ 249 (501)
T PRK10762 242 ------------------------------L------------------------------------E------DQYPRL 249 (501)
T ss_pred ------------------------------c------------------------------------c------cccccc
Confidence 0 0 000000
Q ss_pred CCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEc
Q 000452 1230 PLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILID 1309 (1495)
Q Consensus 1230 ~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~ID 1309 (1495)
+ ++ |..-.|+++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+|
T Consensus 250 ~-------~~---~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~ 312 (501)
T PRK10762 250 D-------KA---PGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLD 312 (501)
T ss_pred c-------cC---CCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEEC
Confidence 0 00 0112589999984 27999999999999999999999999999999999999999999999
Q ss_pred CEeCCCCCH-HHHhcccEEEcccC---cCCC-CcHHHhcCCCC-----C----CC----HHHHHHHHHHcCCcHHHHhcc
Q 000452 1310 GIDISLIGL-HDLRTRLSIIPQDP---VMFE-GTVRSNVDPLE-----E----YT----DEQIWEALDKCQLGDEVRKKE 1371 (1495)
Q Consensus 1310 G~dI~~i~l-~~LR~~isiIpQdp---~LF~-GTIR~NLdp~~-----~----~s----d~ei~~aL~~~~L~~~v~~lp 1371 (1495)
|.++...+. +.+|++++|+||+| .+|. -|+++|+.... . .+ ++++.++++++++.+
T Consensus 313 g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------ 386 (501)
T PRK10762 313 GHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKT------ 386 (501)
T ss_pred CEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCC------
Confidence 999987664 34678899999997 3554 59999996310 0 11 234667777776631
Q ss_pred CCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-c
Q 000452 1372 GKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-S 1449 (1495)
Q Consensus 1372 ~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~ 1449 (1495)
...|. ....||||||||++|||||+.+|+||||||||++||+.+...+.+.|++.. +++|||+|+|+++.+.. |
T Consensus 387 ~~~~~----~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~ 462 (501)
T PRK10762 387 PSMEQ----AIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMS 462 (501)
T ss_pred CCccC----chhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhC
Confidence 11222 334699999999999999999999999999999999999999999999864 47899999999998865 9
Q ss_pred CEEEEEeCcEEEEecChhHHh
Q 000452 1450 DMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1450 DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|+|++|++|++++.|+++++.
T Consensus 463 d~v~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 463 DRILVMHEGRISGEFTREQAT 483 (501)
T ss_pred CEEEEEECCEEEEEeccccCC
Confidence 999999999999999988764
No 59
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.1e-63 Score=687.71 Aligned_cols=531 Identities=17% Similarity=0.201 Sum_probs=399.5
Q ss_pred HHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 000452 935 AQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAP 1014 (1495)
Q Consensus 935 ~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap 1014 (1495)
..++..+++++.++.+....+...+..+......+..++++..++..++...........+.+....+...+++++++.|
T Consensus 309 ~~i~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~ 388 (1495)
T PLN03232 309 FKIGHDLSQFVGPVILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLT 388 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34667777778888777554322111111111111111111111222221112222356777888888889999999999
Q ss_pred cccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1015 MSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSAREL 1094 (1495)
Q Consensus 1015 ~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l 1094 (1495)
..+++...+|+++||+++|++.++... ..+..+....+.++..++++...-....++.++++++++.+..++.+..+..
T Consensus 389 ~~~~~~~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~ 467 (1495)
T PLN03232 389 HEARKNFASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKL 467 (1495)
T ss_pred hhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999875 3444454444444444333322111111112222223333444555666666
Q ss_pred HHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1095 SRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLIS 1174 (1495)
Q Consensus 1095 ~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~ 1174 (1495)
++.....++...+.++|.++|+++||+|++|+.|.+++.+..+...+..........+..........++ .++.+....
T Consensus 468 ~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~fg~~~ 546 (1495)
T PLN03232 468 TKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVV-TLVSFGVFV 546 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 7777778888999999999999999999999999999988777666555444333333322221111111 111111222
Q ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeee
Q 000452 1175 IPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQ 1254 (1495)
Q Consensus 1175 ~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~ 1254 (1495)
...+.++++.+-.++++...+...+..+...+..+.+..+|.+|+.++++.+++.+.. .++ ..+..+.|+|+|++
T Consensus 547 v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~----~~~-~~~~~~~I~~~~vs 621 (1495)
T PLN03232 547 LLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQ----NPP-LQPGAPAISIKNGY 621 (1495)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccc----cCC-cCCCCCcEEEEeeE
Confidence 3367789999888888888888888899999999999999999999999766542211 111 11234579999999
Q ss_pred EEeCCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCc
Q 000452 1255 VRYAPH-MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPV 1333 (1495)
Q Consensus 1255 ~~Y~~~-~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~ 1333 (1495)
|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++|.+. .+|++|+||||+|+
T Consensus 622 F~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~------------~~~~~Iayv~Q~p~ 689 (1495)
T PLN03232 622 FSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV------------VIRGSVAYVPQVSW 689 (1495)
T ss_pred EEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE------------EecCcEEEEcCccc
Confidence 999753 35799999999999999999999999999999999999999999763 46889999999999
Q ss_pred CCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCC
Q 000452 1334 MFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATA 1413 (1495)
Q Consensus 1334 LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTs 1413 (1495)
||+|||||||....+++++++++|++.|++.++++.+|+|+||.|||+|.|||||||||++||||++++|+|+|||||||
T Consensus 690 Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptS 769 (1495)
T PLN03232 690 IFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLS 769 (1495)
T ss_pred cccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHH-HHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHh
Q 000452 1414 SVDTATDNLI-QQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYT 1485 (1495)
Q Consensus 1414 slD~~Td~~I-q~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~ 1485 (1495)
+||++|++.| ++.++...+++|+|+||||++++..||+|++|++|+|+|.|+|++|+++ ++.|++++++..
T Consensus 770 aLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~-~~~~~~l~~~~~ 841 (1495)
T PLN03232 770 ALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKS-GSLFKKLMENAG 841 (1495)
T ss_pred ccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhc-chhHHHHHHhcc
Confidence 9999999976 5667777789999999999999999999999999999999999999974 688999987654
No 60
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.7e-63 Score=685.10 Aligned_cols=473 Identities=18% Similarity=0.224 Sum_probs=380.9
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 992 ATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFI 1071 (1495)
Q Consensus 992 ~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1495)
...+.+....+...+++++++.|..+++..++|+++|++++|++.++... ..+..++...+.++..++++.....+..+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~-~~l~~l~~~pl~ii~~~~lL~~~lg~~~l 444 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQIC-QQLHTLWSAPFRIIIAMVLLYQQLGVASL 444 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777888888889999999999999999999999999999999999876 34555555555555544444332222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHH
Q 000452 1072 VFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAME 1151 (1495)
Q Consensus 1072 v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1151 (1495)
+.++++++++.++.++.+..+..++.....+....+.++|.++|+++||+|++|+.|.+++.+..+...+..........
T Consensus 445 ~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~ 524 (1622)
T PLN03130 445 IGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSA 524 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333344444555566666677777777888999999999999999999999999999998877765544333332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCC
Q 000452 1152 WLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPL 1231 (1495)
Q Consensus 1152 wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~ 1231 (1495)
+..+.......+ +.++.+.......+.++++.+-.++++...+...+..+...+..+....+|.+|+.+|++.+++.+.
T Consensus 525 ~~~~~~~~~~~~-v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~ 603 (1622)
T PLN03130 525 FNSFILNSIPVL-VTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLL 603 (1622)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc
Confidence 222221111111 1111111222346789999988888888888888888999999999999999999999976543211
Q ss_pred ccccCCCCCCCCCcceEEEeeeeEEeCCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCc-cEEEEc
Q 000452 1232 EIEESRPNHSWPSHGKIDLRDLQVRYAPH-MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAA-GQILID 1309 (1495)
Q Consensus 1232 ~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~-~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~-G~I~ID 1309 (1495)
. . ++ .-+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|.+ |+|.
T Consensus 604 ~---~-~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~-- 676 (1622)
T PLN03130 604 P---N-PP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVV-- 676 (1622)
T ss_pred c---C-Cc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEE--
Confidence 0 0 11 11224579999999999753 3569999999999999999999999999999999999999999 9997
Q ss_pred CEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 000452 1310 GIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1310 G~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1389 (1495)
+|++|+||||+|+||+|||||||....+++++++++|++.|+|.++++.+|+|+||.|||+|.||||||
T Consensus 677 -----------l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQ 745 (1622)
T PLN03130 677 -----------IRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQ 745 (1622)
T ss_pred -----------EcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHH
Confidence 467899999999999999999999888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHH-HHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhH
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLI-QQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1390 rQrl~LARALLr~~~ILiLDEaTsslD~~Td~~I-q~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~ 1468 (1495)
||||+||||++++|+|+|||||||+||+++++.| +++++...+++|+|+||||++.+..||+|++|++|+|+|.|+|++
T Consensus 746 KQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~e 825 (1622)
T PLN03130 746 KQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEE 825 (1622)
T ss_pred HHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHH
Confidence 9999999999999999999999999999999866 678887788999999999999999999999999999999999999
Q ss_pred HhhcCCChHHHHHHHHh
Q 000452 1469 LLENKSSSFSQLVAEYT 1485 (1495)
Q Consensus 1469 Ll~~~~s~f~~lv~~~~ 1485 (1495)
|+++ ++.|++++++..
T Consensus 826 L~~~-~~~~~~l~~~~~ 841 (1622)
T PLN03130 826 LSNN-GPLFQKLMENAG 841 (1622)
T ss_pred HHhc-chhHHHHHHhcc
Confidence 9964 688999987654
No 61
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-65 Score=640.81 Aligned_cols=201 Identities=16% Similarity=0.311 Sum_probs=174.1
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
..|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +.++
T Consensus 318 ~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 384 (530)
T PRK15064 318 NALEVENLTKGFDN--GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANI 384 (530)
T ss_pred ceEEEEeeEEeeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEE
Confidence 36999999999964 3599999999999999999999999999999999999999999999998 3579
Q ss_pred EEEcccCc--CCC-CcHHHhcCCCC--CCCHHHHHHHHHHcCCc-HHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1326 SIIPQDPV--MFE-GTVRSNVDPLE--EYTDEQIWEALDKCQLG-DEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1326 siIpQdp~--LF~-GTIR~NLdp~~--~~sd~ei~~aL~~~~L~-~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+|+||+|. ++. .|+++|+..+. ...++++.++|+..++. +.... ...+||||||||++||||+
T Consensus 385 ~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~~LSgGq~qrv~la~al 453 (530)
T PRK15064 385 GYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDIKK-----------SVKVLSGGEKGRMLFGKLM 453 (530)
T ss_pred EEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHhcC-----------cccccCHHHHHHHHHHHHH
Confidence 99999984 443 59999986322 23456788899998874 33222 2357999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEE-EecChhHHhhc
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIE-EYDSPRKLLEN 1472 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~iv-E~gsp~~Ll~~ 1472 (1495)
+++|+||||||||++||+.+...+.+.|++. +.|||+|||+++.+.. ||+|++|++|+++ +.|++.++++.
T Consensus 454 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 454 MQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 9999999999999999999999999999886 4699999999999875 9999999999998 77999988754
No 62
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.5e-62 Score=636.62 Aligned_cols=547 Identities=19% Similarity=0.225 Sum_probs=446.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 289 LKLIKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQ 368 (1495)
Q Consensus 289 ~~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~ 368 (1495)
.+.++..++.+++.+....+..++..++.++.|++++.++|.+..... ....+.++++++++.++..++.....+...+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~-~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~ 205 (694)
T TIGR01846 127 FSWFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG-LSTLSVLALAMLAVAIFEPALGGLRTYLFAH 205 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666778888888888999999999999999999998753322 1223344455555556667777777778888
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 369 LGIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIASVAA 447 (1495)
Q Consensus 369 ~g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~l~g 447 (1495)
++.++...+...+|+|.++++....++.++|++++++ +|++.+.++.. .+.......+.+++.+++++..-++.+++.
T Consensus 206 ~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~ 284 (694)
T TIGR01846 206 LTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVV 284 (694)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 69999998753 333444344444445555555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 448 FFGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSIT 527 (1495)
Q Consensus 448 l~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~ 527 (1495)
++++++...+...+.+..++..++.++..+++...+.|.++|+++||.++.|+.+.+++.+..++..+...+........
T Consensus 285 l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (694)
T TIGR01846 285 IGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIA 364 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666666777777888888889999999999999999999999999999998888776655554444444433333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 000452 528 SFVFWCAP--TFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDL 605 (1495)
Q Consensus 528 ~~~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~ 605 (1495)
..+..... ..+.++.++.+.+..+.+|.|.++++..+...+..|+..+...+..+.+++++++|+.++++.++..+..
T Consensus 365 ~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~ 444 (694)
T TIGR01846 365 GQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA 444 (694)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC
Confidence 22222222 1233456777877888999999999999999999999999999999999999999999999876543221
Q ss_pred ccCCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe---
Q 000452 606 VEKQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--- 682 (1495)
Q Consensus 606 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--- 682 (1495)
...+.......|+++|++|+|+.+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 445 -~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~ 522 (694)
T TIGR01846 445 -GLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLA 522 (694)
T ss_pred -CCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehh
Confidence 111111223469999999999743 457999999999999999999999999999999999999999999999984
Q ss_pred ----------EEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHH
Q 000452 683 ----------KAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRI 751 (1495)
Q Consensus 683 ----------~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 751 (1495)
++||||+|+++++|++|||.++.+ .++++..++++.++++++++.+|+|.+|.+|++|.+||||||||+
T Consensus 523 ~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri 602 (694)
T TIGR01846 523 IADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRI 602 (694)
T ss_pred hCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHH
Confidence 589999999999999999999864 678899999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000452 752 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
+||||++++|+|+|||||||+||+++++.+.+. +....+++|+|++||+++.++.||+|++|++|++++.|+++++++.
T Consensus 603 ~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~ 681 (694)
T TIGR01846 603 AIARALVGNPRILIFDEATSALDYESEALIMRN-MREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLAL 681 (694)
T ss_pred HHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHH-HHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHc
Confidence 999999999999999999999999999988765 4555678999999999999999999999999999999999999988
Q ss_pred CCchhHHHH
Q 000452 832 GTDFMELVD 840 (1495)
Q Consensus 832 ~~~~~~l~~ 840 (1495)
++.|.++..
T Consensus 682 ~~~y~~l~~ 690 (694)
T TIGR01846 682 QGLYARLWQ 690 (694)
T ss_pred CChHHHHHH
Confidence 888888765
No 63
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1e-62 Score=622.84 Aligned_cols=504 Identities=20% Similarity=0.219 Sum_probs=392.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 294 AMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYA-LVSAFCVAKLVECLCQRFFVFRLEQLGIR 372 (1495)
Q Consensus 294 al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~-l~~~l~~~~~~~~~~~~~~~~~~~~~g~r 372 (1495)
.+++.+++.++...++.++..++..+.|++++.+++.+..... ...+. +..++++..++..++.....+...+.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (529)
T TIGR02868 6 PLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP--VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALR 83 (529)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677777788888899999999999999999987653221 11111 11112223344455555555666778889
Q ss_pred HHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 373 LRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWY-IHDPWLFLFEVALSFLILYKSLGIASVAAFFGT 451 (1495)
Q Consensus 373 ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~~ 451 (1495)
+...++..+|+|.++++....+++++|+++|++++|++++.+.+.. +..+....+.+++++++++..-...+++.++.+
T Consensus 84 ~~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~ 163 (529)
T TIGR02868 84 SLGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGL 163 (529)
T ss_pred HHHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999987654 334444555555555555443333334333333
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 452 VIFMLVN-VPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFV 530 (1495)
Q Consensus 452 i~~~~~~-~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~ 530 (1495)
.++.++. ....+..++..++..+..++..+...|.++|+++||.+++|+.+.+++.+..++..+...+.....+....+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (529)
T TIGR02868 164 LLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAA 243 (529)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333332 223334455667777888999999999999999999999999999998887665555554444444433333
Q ss_pred HHHHHH--HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 000452 531 FWCAPT--FVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEK 608 (1495)
Q Consensus 531 ~~~~p~--~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~ 608 (1495)
...... .+.++.++.+.+.++.++.+.+.+++.+...+..|+..++..+..+.+++++.+|+.++++.++..++....
T Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~ 323 (529)
T TIGR02868 244 QLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVP 323 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCC
Confidence 222222 223345566777788899999999999999999999999999999999999999999999776532211110
Q ss_pred CC--CCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC-----
Q 000452 609 QP--RGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG----- 681 (1495)
Q Consensus 609 ~~--~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g----- 681 (1495)
.+ .......|+++|++|+|+. ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 324 ~~~~~~~~~~~I~~~~vsf~Y~~--~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~ 401 (529)
T TIGR02868 324 AAGALGLGKPTLELRDLSFGYPG--SPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSS 401 (529)
T ss_pred CCcccCCCCceEEEEEEEEecCC--CCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhh
Confidence 00 1112246999999999963 34699999999999999999999999999999999999999999999999
Q ss_pred -------eEEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 682 -------TKAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 682 -------~~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
.++||||+|++|++||+|||.+|.+ .++++++++++.++++++++.+|+|++|.+||+|.+||||||||++|
T Consensus 402 ~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiai 481 (529)
T TIGR02868 402 LQDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLAL 481 (529)
T ss_pred HHHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHH
Confidence 6899999999999999999999865 68899999999999999999999999999999999999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCC
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQV 802 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~ 802 (1495)
|||++++|+|+||||||||||+++++.|.+.+ ....+++|+|+|||++
T Consensus 482 ARall~~~~iliLDE~TSaLD~~te~~I~~~l-~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 482 ARALLADAPILLLDEPTEHLDAGTESELLEDL-LAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HHhcCCCEEEEEecCC
Confidence 99999999999999999999999999998654 4556789999999985
No 64
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=4.2e-62 Score=624.04 Aligned_cols=541 Identities=21% Similarity=0.280 Sum_probs=422.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 295 MFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIRLR 374 (1495)
Q Consensus 295 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~rir 374 (1495)
+++.+++.+.+.+++.++..++.++.|+++..++|.+.... ... .+++.+++..++..+......+...++..+++
T Consensus 13 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (588)
T PRK13657 13 YLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKG---DIF-PLLAAWAGFGLFNIIAGVLVARHADRLAHRRR 88 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---cHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777888888899999999999999999999875432 111 11112222222223333334555677788889
Q ss_pred HHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 375 AALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIASVAAFFGTVI 453 (1495)
Q Consensus 375 ~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~~i~ 453 (1495)
..+...+|+|.++++.....+.+.|+++++++.|++.+.+... .+.......+..++.+++++..-.+.+++.++++++
T Consensus 89 ~~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l 168 (588)
T PRK13657 89 LAVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIV 168 (588)
T ss_pred HHHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999876532 333333333333333333333333334444444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Q 000452 454 FMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFV--F 531 (1495)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~--~ 531 (1495)
...+...+.+..++.+++.++..++......|.++|+++||.|+.|+.+.+++.+.-++-.+...+..........+ .
T Consensus 169 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (588)
T PRK13657 169 YTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRA 248 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566677788888888999999999999999999999999999999877776554433322222221111111111 1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCC
Q 000452 532 WCAPTFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEKQPR 611 (1495)
Q Consensus 532 ~~~p~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~ 611 (1495)
......+.++.++.+.+..+.+|.|.+++++.++..+..|+..+...+..+.+++.+++|+.++++.++..+......+.
T Consensus 249 ~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~ 328 (588)
T PRK13657 249 ASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGAIDL 328 (588)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCc
Confidence 11122344556777888888999999999999999999999999999999999999999999998764432211111111
Q ss_pred CCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC----------
Q 000452 612 GSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------- 681 (1495)
Q Consensus 612 ~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g---------- 681 (1495)
......|+++|++|+|+. ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 329 ~~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~ 406 (588)
T PRK13657 329 GRVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRAS 406 (588)
T ss_pred CCCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHH
Confidence 112246999999999963 35799999999999999999999999999999999999999999999998
Q ss_pred ---eEEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 682 ---TKAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 682 ---~~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
.++||||+|++|++|++|||.++.+ .++++..++++.++++++++.+|.|.+|.+|++|.+||||||||++||||+
T Consensus 407 ~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARal 486 (588)
T PRK13657 407 LRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARAL 486 (588)
T ss_pred HHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHH
Confidence 3699999999999999999999964 678889999999999999999999999999999999999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCCchhH
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGTDFME 837 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 837 (1495)
+++|+|+|||||||+||+++++.+++.+ ....+++|+|+|||+++.++.||+|++|++|++.+.|+++++++.++.|.+
T Consensus 487 l~~~~iliLDEpts~LD~~t~~~i~~~l-~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~~~~y~~ 565 (588)
T PRK13657 487 LKDPPILILDEATSALDVETEAKVKAAL-DELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVARGGRFAA 565 (588)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHH-HHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHCCChHHH
Confidence 9999999999999999999999997654 445578999999999999999999999999999999999999988888888
Q ss_pred HHHHH
Q 000452 838 LVDAH 842 (1495)
Q Consensus 838 l~~~~ 842 (1495)
+....
T Consensus 566 l~~~~ 570 (588)
T PRK13657 566 LLRAQ 570 (588)
T ss_pred HHHHh
Confidence 77643
No 65
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.4e-62 Score=621.33 Aligned_cols=541 Identities=21% Similarity=0.220 Sum_probs=417.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCc-chhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 295 MFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLS-GKRDF-ENEGYA-LVSAFCVAKLVECLCQRFFVFRLEQLGI 371 (1495)
Q Consensus 295 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~~-~~~g~~-l~~~l~~~~~~~~~~~~~~~~~~~~~g~ 371 (1495)
+.+.+++.+++..++.++..++..+.|++++.+++... ..... ....+. .++++++..++..++.....+...+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATF 89 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677788888889999999999999999999998642 21100 011111 2223333444555666666667778899
Q ss_pred HHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 372 RLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWY-IHDPWLFLFEVALSFLILYKSLGIASVAAFFG 450 (1495)
Q Consensus 372 rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~ 450 (1495)
++...+...+|+|.++++....++.++|++++++++|++++.+++.. +..+....+.+++++++++..-...+++.+++
T Consensus 90 ~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~ 169 (574)
T PRK11160 90 RVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGI 169 (574)
T ss_pred HHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987643 44444555555555555543332223322222
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 451 TVIF-MLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSF 529 (1495)
Q Consensus 451 ~i~~-~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~ 529 (1495)
+.+. ..+...+.+..++..++..+..++....+.|.++|+++||.|+.|+.+.+++.+..++-.+...+.....+....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (574)
T PRK11160 170 LLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQA 249 (574)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 223345566667778888888899999999999999999999999998888777655444433333333332222
Q ss_pred HHHHHH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc
Q 000452 530 VFWCAP--TFVSVITFGTCILLKVPLESGKVLSAIATFRL-LQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLV 606 (1495)
Q Consensus 530 ~~~~~p--~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~-l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~ 606 (1495)
+..... ..+.++.++.+. .++.++.|..++++.+... ...|+..++..+..+.+++.|.+||.++++.++..++..
T Consensus 250 ~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~~ 328 (574)
T PRK11160 250 LMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFPT 328 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCc
Confidence 221111 122233445554 4667888988776665433 356888899999999999999999999998654321111
Q ss_pred cCCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe----
Q 000452 607 EKQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT---- 682 (1495)
Q Consensus 607 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~---- 682 (1495)
.. +.......|+++|++|+|+.+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 329 ~~-~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~~ 406 (574)
T PRK11160 329 TS-TAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIAD 406 (574)
T ss_pred cc-CCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhh
Confidence 11 111123469999999999632 357999999999999999999999999999999999999999999999984
Q ss_pred ---------EEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHH
Q 000452 683 ---------KAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQ 752 (1495)
Q Consensus 683 ---------~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 752 (1495)
++||||+|++|++|++|||.++.+ .++++..++++.++++++++. |+|.+|.+||+|.+||||||||++
T Consensus 407 ~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRia 485 (574)
T PRK11160 407 YSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRLG 485 (574)
T ss_pred CCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHHH
Confidence 699999999999999999999875 688899999999999999999 999999999999999999999999
Q ss_pred HHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcC
Q 000452 753 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
||||++++|+|+|||||||+||+++++.+.+. +....+++|+|+|||+++.++.||+|++|++|++++.|+++|+++++
T Consensus 486 lARall~~~~ililDE~ts~lD~~t~~~i~~~-l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~ 564 (574)
T PRK11160 486 IARALLHDAPLLLLDEPTEGLDAETERQILEL-LAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLAQQ 564 (574)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHhcC
Confidence 99999999999999999999999999988754 55556789999999999999999999999999999999999999988
Q ss_pred CchhHHHH
Q 000452 833 TDFMELVD 840 (1495)
Q Consensus 833 ~~~~~l~~ 840 (1495)
+.|.++.+
T Consensus 565 g~y~~l~~ 572 (574)
T PRK11160 565 GRYYQLKQ 572 (574)
T ss_pred cHHHHHHh
Confidence 88877653
No 66
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.5e-65 Score=641.55 Aligned_cols=439 Identities=22% Similarity=0.346 Sum_probs=334.9
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCC--CCcEEEEcC--------------
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK--ISGTLKLCG-------------- 681 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~--~~G~v~~~g-------------- 681 (1495)
++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+.+| ++|+|.++|
T Consensus 2 l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFG---GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeC---CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 78999999995 35799999999999999999999999999999999999987 799999987
Q ss_pred eEEEEccCCcccC-ccHHHHHhcCCCC-------CHH----HHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHH
Q 000452 682 TKAYVAQSPWIQS-GKIEDNILFGKEM-------DRE----RYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQ 749 (1495)
Q Consensus 682 ~~ayv~Q~~~l~~-~ti~enI~fg~~~-------~~~----~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 749 (1495)
.++|++|++.++. .|++||+.++... +.+ +.+++++.+++.... ......+|||||||
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgG~~q 148 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN----------VTRPVGDYGGGQQQ 148 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc----------ccCchhhCCHHHHH
Confidence 2799999987764 5999999886431 111 223333333332100 12446789999999
Q ss_pred HHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHH
Q 000452 750 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDV 828 (1495)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 828 (1495)
||+||||++.+|+++||||||++||+...+.+.+.+.....+|+|+|++||+++++.. ||+|++|++|+++..|+.+++
T Consensus 149 rv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (500)
T TIGR02633 149 LVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTM 228 (500)
T ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccC
Confidence 9999999999999999999999999999988876433333458899999999999875 999999999998764421100
Q ss_pred HhcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchhhhhhHHHHHhh
Q 000452 829 INSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQLVQEEEREK 908 (1495)
Q Consensus 829 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 908 (1495)
. . +.
T Consensus 229 ~------------------------------------------------------------------------~-~~--- 232 (500)
T TIGR02633 229 S------------------------------------------------------------------------E-DD--- 232 (500)
T ss_pred C------------------------------------------------------------------------H-HH---
Confidence 0 0 00
Q ss_pred cCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHH
Q 000452 909 GKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARS 988 (1495)
Q Consensus 909 g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~ 988 (1495)
.. .. .. ..
T Consensus 233 ------~~----~~------------------------------~~-----~~--------------------------- 240 (500)
T TIGR02633 233 ------II----TM------------------------------MV-----GR--------------------------- 240 (500)
T ss_pred ------HH----HH------------------------------Hh-----Cc---------------------------
Confidence 00 00 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 989 TLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQ 1068 (1495)
Q Consensus 989 ~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1495)
+
T Consensus 241 -------------------------~------------------------------------------------------ 241 (500)
T TIGR02633 241 -------------------------E------------------------------------------------------ 241 (500)
T ss_pred -------------------------c------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHH
Q 000452 1069 VFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAA 1148 (1495)
Q Consensus 1069 ~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~ 1148 (1495)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCC
Q 000452 1149 AMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSE 1228 (1495)
Q Consensus 1149 ~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E 1228 (1495)
.. + ..+.+
T Consensus 242 -------------------------------~~------------------------------------~-----~~~~~ 249 (500)
T TIGR02633 242 -------------------------------IT------------------------------------S-----LYPHE 249 (500)
T ss_pred -------------------------------cc------------------------------------c-----ccccc
Confidence 00 0 00000
Q ss_pred CCCccccCCCCCCCCCcceEEEeeeeEEeCCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-CccEE
Q 000452 1229 PPLEIEESRPNHSWPSHGKIDLRDLQVRYAPH-MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-AAGQI 1306 (1495)
Q Consensus 1229 ~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~-~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-~~G~I 1306 (1495)
+. + +..-.|+++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|
T Consensus 250 ~~-------~----~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i 318 (500)
T TIGR02633 250 PH-------E----IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNV 318 (500)
T ss_pred cc-------C----CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEE
Confidence 00 0 011259999999999432 23599999999999999999999999999999999999995 89999
Q ss_pred EEcCEeCCCCCH-HHHhcccEEEcccC---cCCC-CcHHHhcCCC-----CC---CC----HHHHHHHHHHcCCcHHHHh
Q 000452 1307 LIDGIDISLIGL-HDLRTRLSIIPQDP---VMFE-GTVRSNVDPL-----EE---YT----DEQIWEALDKCQLGDEVRK 1369 (1495)
Q Consensus 1307 ~IDG~dI~~i~l-~~LR~~isiIpQdp---~LF~-GTIR~NLdp~-----~~---~s----d~ei~~aL~~~~L~~~v~~ 1369 (1495)
.++|.++...+. ..+|++++|+||++ .+|. -|+++|+... .. .. .+++.++++++++.+.
T Consensus 319 ~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--- 395 (500)
T TIGR02633 319 FINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTA--- 395 (500)
T ss_pred EECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCC---
Confidence 999999875443 56788999999997 3665 4999999642 11 11 2346677777766311
Q ss_pred ccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc
Q 000452 1370 KEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID 1448 (1495)
Q Consensus 1370 lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~ 1448 (1495)
-.|.++ ..||||||||++|||||+++|++|||||||++||+.+...+.+.|++.. .+.|||+|+|+++.+..
T Consensus 396 ---~~~~~~----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~ 468 (500)
T TIGR02633 396 ---SPFLPI----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLG 468 (500)
T ss_pred ---CccCcc----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHH
Confidence 123333 4699999999999999999999999999999999999999999988754 47899999999999875
Q ss_pred -cCEEEEEeCcEEEEecChhHH
Q 000452 1449 -SDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1449 -~DrIlVL~~G~ivE~gsp~~L 1469 (1495)
||+|++|++|+++..++..++
T Consensus 469 ~~d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 469 LSDRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred hCCEEEEEECCEEEEEEccccC
Confidence 999999999999988765543
No 67
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.9e-62 Score=621.78 Aligned_cols=529 Identities=20% Similarity=0.275 Sum_probs=416.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000452 310 AIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIRLRAALIAMIYNKGLKLS 389 (1495)
Q Consensus 310 ~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~rir~~L~~~iy~K~L~ls 389 (1495)
.++..++..+.|++++.+++.+..........+.+++.++++.++..++.....+...+.+.++...+...+|+|.++++
T Consensus 4 ~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~ 83 (569)
T PRK10789 4 LIIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQH 83 (569)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34556667788999999999775432111223333444445555555666555666677889999999999999999999
Q ss_pred cchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 390 SQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGI-ASVAAFFGTVIFMLVNVPLSTVQEK 467 (1495)
Q Consensus 390 ~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~-~~l~gl~~~i~~~~~~~~~~~~~~~ 467 (1495)
.....++++|+++|++++|++.+..... .+..++..++..++++++++..+++ .+++.++++.+.+.+...+.+...+
T Consensus 84 ~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 84 PEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998899999999999999999986543 3455555555555555544334444 3344444444444555566677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q 000452 468 FQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFVFWCAP--TFVSVITFGT 545 (1495)
Q Consensus 468 ~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p--~~v~~~~f~~ 545 (1495)
..++.++..++..+.+.|.++|+++||.+++|+.+.++..+..++..+...+.....+....+..... ..+.++.++.
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888888889999999999999999999998877766543333322222222222211111111 1233445667
Q ss_pred HHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccEEEEeeEE
Q 000452 546 CILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEKQPRGSSETAIEIADGNF 625 (1495)
Q Consensus 546 ~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~~ 625 (1495)
+.+.++.++.|.+++++.++..+..|+..++..+..+.+++++.+||.++++.++..+..... ....+..|+++|++|
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~~--~~~~~~~I~~~~v~~ 321 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSEP--VPEGRGELDVNIRQF 321 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCC--CCCCCCcEEEEEEEE
Confidence 777888999999999999999999999999999999999999999999999865432211111 111234699999999
Q ss_pred EecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------EEEEccCCcc
Q 000452 626 SWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KAYVAQSPWI 692 (1495)
Q Consensus 626 ~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ayv~Q~~~l 692 (1495)
+|+.. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++||+|+|++
T Consensus 322 ~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~l 400 (569)
T PRK10789 322 TYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFL 400 (569)
T ss_pred ECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCee
Confidence 99743 457999999999999999999999999999999999999999999999984 5999999999
Q ss_pred cCccHHHHHhcCC-CCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCC
Q 000452 693 QSGKIEDNILFGK-EMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFS 771 (1495)
Q Consensus 693 ~~~ti~enI~fg~-~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~s 771 (1495)
+++|++|||.++. +.++++++++++.+++++++..+|+|.+|.+|++|.+||||||||++||||++++|+|+|||||||
T Consensus 401 f~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts 480 (569)
T PRK10789 401 FSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALS 480 (569)
T ss_pred ccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccc
Confidence 9999999999985 478889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCCchhHHHHHH
Q 000452 772 AVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGTDFMELVDAH 842 (1495)
Q Consensus 772 aLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~ 842 (1495)
+||+++++++.+. +....+++|+|++||+++.++.||+|++|++|++++.|+++++++..+.|.++...+
T Consensus 481 ~LD~~~~~~i~~~-l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 550 (569)
T PRK10789 481 AVDGRTEHQILHN-LRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQ 550 (569)
T ss_pred cCCHHHHHHHHHH-HHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHh
Confidence 9999999999765 455567999999999999999999999999999999999999998888888877544
No 68
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=7.3e-62 Score=657.48 Aligned_cols=216 Identities=14% Similarity=0.203 Sum_probs=188.2
Q ss_pred cceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcc
Q 000452 1245 HGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTR 1324 (1495)
Q Consensus 1245 ~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~ 1324 (1495)
...|+++|++++|+.+...+|+||||+|++||++||+|++|||||||+++|.|+.+|++|+|.++|.|+.+ ..++.|++
T Consensus 1935 ~~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 34699999999997543569999999999999999999999999999999999999999999999999975 46678899
Q ss_pred cEEEcccCcCCCC-cHHHhcCCC---CCCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1325 LSIIPQDPVMFEG-TVRSNVDPL---EEYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1325 isiIpQdp~LF~G-TIR~NLdp~---~~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
|||+||++.+++. |+||||... ...+. +.+.++++.++|.+...+.+ ..||||||||++||
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~~-----------~~LSGGqKqRLslA 2082 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLA-----------GTYSGGNKRKLSTA 2082 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999999998875 999999632 11222 34556788888876544433 36899999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhc
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
|||+.+|+||+|||||++||+.+.+.+.+.|++.. +++|||+++|+++.+.. ||||++|++|++++.|++++|.++
T Consensus 2083 ~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2083 IALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999998863 57999999999999875 999999999999999999999654
No 69
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-65 Score=637.74 Aligned_cols=435 Identities=22% Similarity=0.325 Sum_probs=335.5
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC--------------e
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------T 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--------------~ 682 (1495)
.++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFP---GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEEC---CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 589999999995 24699999999999999999999999999999999999999999999876 2
Q ss_pred EEEEccCCcccC-ccHHHHHhcCCC------CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHH
Q 000452 683 KAYVAQSPWIQS-GKIEDNILFGKE------MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRI 751 (1495)
Q Consensus 683 ~ayv~Q~~~l~~-~ti~enI~fg~~------~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 751 (1495)
++|++|++.++. .|++||+.++.. .+. ++.+++++.+++.. .......+||||||||+
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGq~qrv 149 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDI-----------DPDTPLKYLSIGQRQMV 149 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCC-----------CcCCchhhCCHHHHHHH
Confidence 689999988775 599999998631 122 23334444444321 12456789999999999
Q ss_pred HHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000452 752 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
+||||++.+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++++.. ||+|++|++|+++..++..+
T Consensus 150 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~--- 226 (501)
T PRK11288 150 EIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMA--- 226 (501)
T ss_pred HHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccc---
Confidence 99999999999999999999999999988876443333358999999999999865 99999999999875331000
Q ss_pred cCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchhhhhhHHHHHhhcC
Q 000452 831 SGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQLVQEEEREKGK 910 (1495)
Q Consensus 831 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~ 910 (1495)
. .. .++
T Consensus 227 ------------------------------------~---------------------~~------------~~~----- 232 (501)
T PRK11288 227 ------------------------------------Q---------------------VD------------RDQ----- 232 (501)
T ss_pred ------------------------------------c---------------------CC------------HHH-----
Confidence 0 00 000
Q ss_pred chHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 911 VEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTL 990 (1495)
Q Consensus 911 v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~ 990 (1495)
+... ... .
T Consensus 233 --------~~~~------------------------------~~~-----~----------------------------- 240 (501)
T PRK11288 233 --------LVQA------------------------------MVG-----R----------------------------- 240 (501)
T ss_pred --------HHHH------------------------------hcC-----C-----------------------------
Confidence 0000 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 991 LATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVF 1070 (1495)
Q Consensus 991 ~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 1070 (1495)
+
T Consensus 241 -----------------------~-------------------------------------------------------- 241 (501)
T PRK11288 241 -----------------------E-------------------------------------------------------- 241 (501)
T ss_pred -----------------------C--------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHH
Q 000452 1071 IVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAM 1150 (1495)
Q Consensus 1071 ~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~ 1150 (1495)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCC
Q 000452 1151 EWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPP 1230 (1495)
Q Consensus 1151 ~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~ 1230 (1495)
.. +. .+.++.
T Consensus 242 -----------------------------~~------------------------------------~~-----~~~~~~ 251 (501)
T PRK11288 242 -----------------------------IG------------------------------------DI-----YGYRPR 251 (501)
T ss_pred -----------------------------cc------------------------------------cc-----cccccc
Confidence 00 00 000000
Q ss_pred CccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcC
Q 000452 1231 LEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDG 1310 (1495)
Q Consensus 1231 ~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG 1310 (1495)
+ +....++++|++++ .+++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||
T Consensus 252 -------~----~~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g 314 (501)
T PRK11288 252 -------P----LGEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDG 314 (501)
T ss_pred -------C----CCCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECC
Confidence 0 01125889999842 389999999999999999999999999999999999999999999999
Q ss_pred EeCCCCC-HHHHhcccEEEcccCc---CCC-CcHHHhcCCCC--C-------CC----HHHHHHHHHHcCCcHHHHhccC
Q 000452 1311 IDISLIG-LHDLRTRLSIIPQDPV---MFE-GTVRSNVDPLE--E-------YT----DEQIWEALDKCQLGDEVRKKEG 1372 (1495)
Q Consensus 1311 ~dI~~i~-l~~LR~~isiIpQdp~---LF~-GTIR~NLdp~~--~-------~s----d~ei~~aL~~~~L~~~v~~lp~ 1372 (1495)
.++...+ .+..|++++|+||+|. +|. .|+.+|+.... . .. ++++.++++.+++.+ +
T Consensus 315 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~ 388 (501)
T PRK11288 315 KPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKT------P 388 (501)
T ss_pred EECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCccc------C
Confidence 9987543 3456789999999983 554 69999986321 0 01 234666777776621 1
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cC
Q 000452 1373 KLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SD 1450 (1495)
Q Consensus 1373 gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~D 1450 (1495)
..+++ ..+||||||||++|||||+.+|++|||||||++||..+...+.+.|++.. .+.|||+|||+++.+.. ||
T Consensus 389 ~~~~~----~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d 464 (501)
T PRK11288 389 SREQL----IMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVAD 464 (501)
T ss_pred CccCc----cccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCC
Confidence 12333 34799999999999999999999999999999999999999999998764 37899999999999865 99
Q ss_pred EEEEEeCcEEEEecChhHHh
Q 000452 1451 MVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1451 rIlVL~~G~ivE~gsp~~Ll 1470 (1495)
+|++|++|++++.|++++..
T Consensus 465 ~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 465 RIVVMREGRIAGELAREQAT 484 (501)
T ss_pred EEEEEECCEEEEEEccccCC
Confidence 99999999999999988765
No 70
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=7.3e-62 Score=615.90 Aligned_cols=521 Identities=19% Similarity=0.206 Sum_probs=414.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 298 SVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIRLRAAL 377 (1495)
Q Consensus 298 ~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~rir~~L 377 (1495)
.+++.++...++.++..++..+.|++++.++|.+..... ....+.++++++++.++..++.....+...+++.++...+
T Consensus 3 ~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 81 (544)
T TIGR01842 3 KNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS-VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGAL 81 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667778888899999999999999999997643221 1223344555566666777777777888889999999999
Q ss_pred HHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 378 IAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWY--IHDPWLFLFEVALSFLILYKSLGIASVAAFFGTVIFM 455 (1495)
Q Consensus 378 ~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~--~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~~i~~~ 455 (1495)
...+|+|.++++.. ..+...+.+++|++++.+++.. +..+...++.++.. ++++..-++.+++.++++++.+
T Consensus 82 r~~~~~~ll~~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~l~li~l~~~~l~~ 155 (544)
T TIGR01842 82 NQPIFAASFSATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYL-LVCFLLHPWIGILALGGAVVLV 155 (544)
T ss_pred HHHHHHHHhcCccc-----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHH
Confidence 99999999999873 2345678889999999986543 33334444433333 2333333333333333333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 456 LVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFVFWCAP 535 (1495)
Q Consensus 456 ~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p 535 (1495)
.+.....+..++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++.+..++..+...+.....+....+.....
T Consensus 156 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (544)
T TIGR01842 156 GLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFR 235 (544)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455667777788889999999999999999999999999999999998887766655544444333333322222221
Q ss_pred --HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCC
Q 000452 536 --TFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEKQPRGS 613 (1495)
Q Consensus 536 --~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~ 613 (1495)
..+.++.++.+...++.+|+|.+++++.++..+..|+..++..+..+.+++.+.+||.++++.++..++.. .. ..
T Consensus 236 ~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~~--~~ 312 (544)
T TIGR01842 236 IVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAM-PL--PE 312 (544)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC-CC--CC
Confidence 22344567778788889999999999999999999999999999999999999999999997655432111 11 11
Q ss_pred CcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------
Q 000452 614 SETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT----------- 682 (1495)
Q Consensus 614 ~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~----------- 682 (1495)
.+..++++|++|+|+. +++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 313 ~~~~i~~~~v~~~y~~-~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~ 391 (544)
T TIGR01842 313 PEGHLSVENVTIVPPG-GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFG 391 (544)
T ss_pred CCCeEEEEEEEEEcCC-CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHh
Confidence 2346999999999963 2358999999999999999999999999999999999999999999999983
Q ss_pred --EEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhcc
Q 000452 683 --KAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQ 759 (1495)
Q Consensus 683 --~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~ 759 (1495)
++||||+|+++++|++|||.++.+ .+++++.++++.++++++++.+|+|++|.+|++|.+||||||||++||||+++
T Consensus 392 ~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~ 471 (544)
T TIGR01842 392 KHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYG 471 (544)
T ss_pred hheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhc
Confidence 699999999999999999986654 78889999999999999999999999999999999999999999999999999
Q ss_pred CCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHh
Q 000452 760 DADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 760 ~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
+|+++|||||||+||+++++.+.+. +... .+++|+|++||+++.+..||+|++|++|++++.|+++++.+
T Consensus 472 ~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 472 DPKLVVLDEPNSNLDEEGEQALANA-IKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CCCEEEEeCCccccCHHHHHHHHHH-HHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999888764 4444 36899999999999888899999999999999999998754
No 71
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.8e-64 Score=632.20 Aligned_cols=440 Identities=20% Similarity=0.286 Sum_probs=337.0
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ 683 (1495)
.++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLS---DTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcC---CeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 488999999995 246999999999999999999999999999999999999999999998762 5
Q ss_pred EEEccCCcc---------cCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHH
Q 000452 684 AYVAQSPWI---------QSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIA 754 (1495)
Q Consensus 684 ayv~Q~~~l---------~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 754 (1495)
+|++|++.. +..|++||+.++.. ++++.+++++..++.+.. .....+||||||||++||
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la 147 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITALL-----------DRRFKYLSTGETRKTLLC 147 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhhh-----------hCCcccCCHHHHHHHHHH
Confidence 899998643 14589999876532 245566777777765432 366789999999999999
Q ss_pred HHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhcCC
Q 000452 755 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINSGT 833 (1495)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~ 833 (1495)
||++.+|+++||||||++||+...+.+.+.+.....+|+|+|++||+++.+.. ||++++|++|+++..|+++++.....
T Consensus 148 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~ 227 (490)
T PRK10938 148 QALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQAL 227 (490)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcchh
Confidence 99999999999999999999999988876543333358899999999999865 99999999999998887665431100
Q ss_pred chhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchhhhhhHHHHHhhcCchH
Q 000452 834 DFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQLVQEEEREKGKVEF 913 (1495)
Q Consensus 834 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~ 913 (1495)
..+ ....+ .
T Consensus 228 -~~~--------------------------------------------------------------~~~~~-~------- 236 (490)
T PRK10938 228 -VAQ--------------------------------------------------------------LAHSE-Q------- 236 (490)
T ss_pred -hhh--------------------------------------------------------------hhhhh-c-------
Confidence 000 00000 0
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 914 SVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLAT 993 (1495)
Q Consensus 914 ~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~ 993 (1495)
+... ..+
T Consensus 237 ---------------------------------------~~~~---~~~------------------------------- 243 (490)
T PRK10938 237 ---------------------------------------LEGV---QLP------------------------------- 243 (490)
T ss_pred ---------------------------------------cCcc---ccC-------------------------------
Confidence 0000 000
Q ss_pred HHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 994 AGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVF 1073 (1495)
Q Consensus 994 ~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 1073 (1495)
T Consensus 244 -------------------------------------------------------------------------------- 243 (490)
T PRK10938 244 -------------------------------------------------------------------------------- 243 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHH
Q 000452 1074 IPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWL 1153 (1495)
Q Consensus 1074 ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1153 (1495)
T Consensus 244 -------------------------------------------------------------------------------- 243 (490)
T PRK10938 244 -------------------------------------------------------------------------------- 243 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCcc
Q 000452 1154 GFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEI 1233 (1495)
Q Consensus 1154 ~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~ 1233 (1495)
. ..++..
T Consensus 244 -----------------------~------------------------------------------------~~~~~~-- 250 (490)
T PRK10938 244 -----------------------E------------------------------------------------PDEPSA-- 250 (490)
T ss_pred -----------------------c------------------------------------------------cccccc--
Confidence 0 000000
Q ss_pred ccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-CccEEEEcCEe
Q 000452 1234 EESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-AAGQILIDGID 1312 (1495)
Q Consensus 1234 ~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-~~G~I~IDG~d 1312 (1495)
+. ..+ +....|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.+
T Consensus 251 ~~-~~~---~~~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~ 324 (490)
T PRK10938 251 RH-ALP---ANEPRIVLNNGVVSYND--RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRR 324 (490)
T ss_pred cc-ccC---CCCceEEEeceEEEECC--eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEeccc
Confidence 00 000 01225999999999964 3499999999999999999999999999999999998876 69999999987
Q ss_pred CCC-CCHHHHhcccEEEcccCcCCC---CcHHHhcCC-C-------CCCC---HHHHHHHHHHcCCcH-HHHhccCCccc
Q 000452 1313 ISL-IGLHDLRTRLSIIPQDPVMFE---GTVRSNVDP-L-------EEYT---DEQIWEALDKCQLGD-EVRKKEGKLDS 1376 (1495)
Q Consensus 1313 I~~-i~l~~LR~~isiIpQdp~LF~---GTIR~NLdp-~-------~~~s---d~ei~~aL~~~~L~~-~v~~lp~gLdt 1376 (1495)
+.. ......|++++|+||++.++. -|+++++.+ . .... ++++.++++.+++.+ .. |.
T Consensus 325 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~ 397 (490)
T PRK10938 325 RGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKRTA-------DA 397 (490)
T ss_pred CCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchhhc-------cC
Confidence 632 234457889999999987642 477777642 1 1111 245778888888764 32 22
Q ss_pred ccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC-C-cEEEEEecCchhhhc--cCEE
Q 000452 1377 KVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS-D-CTVITIAHRITSVID--SDMV 1452 (1495)
Q Consensus 1377 ~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~-~-~TVI~IAHRl~ti~~--~DrI 1452 (1495)
+ ...||||||||++|||||+++|+||||||||++||+++...+.+.|++..+ + +|||+|+|+++.+.. ||+|
T Consensus 398 ~----~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v 473 (490)
T PRK10938 398 P----FHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRL 473 (490)
T ss_pred c----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeE
Confidence 2 246999999999999999999999999999999999999999999998753 3 479999999999974 7999
Q ss_pred EEEeCcEEEEecC
Q 000452 1453 LLLSHGLIEEYDS 1465 (1495)
Q Consensus 1453 lVL~~G~ivE~gs 1465 (1495)
++|++|++++.-+
T Consensus 474 ~~l~~G~i~~~~~ 486 (490)
T PRK10938 474 EFVPDGDIYRYVQ 486 (490)
T ss_pred EEecCCceEEeec
Confidence 9999999988643
No 72
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-64 Score=631.74 Aligned_cols=432 Identities=23% Similarity=0.354 Sum_probs=329.7
Q ss_pred EeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------EEEE
Q 000452 621 ADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------KAYV 686 (1495)
Q Consensus 621 ~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------------~ayv 686 (1495)
+|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 2 ~nl~~~~~---~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 2 SNISKSFP---GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CceEEEeC---CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 57888885 357999999999999999999999999999999999999999999999873 6899
Q ss_pred ccCCccc-CccHHHHHhcCCC------CCHH----HHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHH
Q 000452 687 AQSPWIQ-SGKIEDNILFGKE------MDRE----RYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIAR 755 (1495)
Q Consensus 687 ~Q~~~l~-~~ti~enI~fg~~------~~~~----~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 755 (1495)
+|++.++ +.|++||+.++.. .+.+ +.+++++.+++. .....+..+|||||||||+|||
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgGq~qrv~lA~ 147 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDID-----------IDPRAKVATLSVSQMQMIEIAK 147 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCC-----------CCccCchhhCCHHHHHHHHHHH
Confidence 9998765 5699999987642 1222 222333333322 1234677899999999999999
Q ss_pred HhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhcCCc
Q 000452 756 ALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINSGTD 834 (1495)
Q Consensus 756 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~~~ 834 (1495)
|++.+|+++||||||++||+.+.+.+++.+.....+|+|+|++||+++++.. ||++++|++|+++..|+.+++..
T Consensus 148 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~---- 223 (491)
T PRK10982 148 AFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTM---- 223 (491)
T ss_pred HHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCH----
Confidence 9999999999999999999999998876433333458999999999999865 99999999999987665322100
Q ss_pred hhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchhhhhhHHHHHhhcCchHH
Q 000452 835 FMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQLVQEEEREKGKVEFS 914 (1495)
Q Consensus 835 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~ 914 (1495)
....
T Consensus 224 ---------------------------------------------------------------~~~~------------- 227 (491)
T PRK10982 224 ---------------------------------------------------------------DKII------------- 227 (491)
T ss_pred ---------------------------------------------------------------HHHH-------------
Confidence 0000
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 915 VYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLATA 994 (1495)
Q Consensus 915 ~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~ 994 (1495)
... .. .
T Consensus 228 ------~~~------------------------------~~-----~--------------------------------- 233 (491)
T PRK10982 228 ------AMM------------------------------VG-----R--------------------------------- 233 (491)
T ss_pred ------HHH------------------------------hC-----C---------------------------------
Confidence 000 00 0
Q ss_pred HHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 995 GYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFI 1074 (1495)
Q Consensus 995 ~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 1074 (1495)
++
T Consensus 234 -------------------~~----------------------------------------------------------- 235 (491)
T PRK10982 234 -------------------SL----------------------------------------------------------- 235 (491)
T ss_pred -------------------Cc-----------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHH
Q 000452 1075 PVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLG 1154 (1495)
Q Consensus 1075 p~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~ 1154 (1495)
T Consensus 236 -------------------------------------------------------------------------------- 235 (491)
T PRK10982 236 -------------------------------------------------------------------------------- 235 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccc
Q 000452 1155 FRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIE 1234 (1495)
Q Consensus 1155 ~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~ 1234 (1495)
.+ ..+.++
T Consensus 236 --------------------------------------------------------------~~-----~~~~~~----- 243 (491)
T PRK10982 236 --------------------------------------------------------------TQ-----RFPDKE----- 243 (491)
T ss_pred --------------------------------------------------------------cc-----cccccc-----
Confidence 00 000000
Q ss_pred cCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCC
Q 000452 1235 ESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDIS 1314 (1495)
Q Consensus 1235 ~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~ 1314 (1495)
.+ |....|+++|++++| +.+|+|+||+|++||++||+|++|||||||+++|+|+.+|++|+|.+||.++.
T Consensus 244 --~~----~~~~~i~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~ 313 (491)
T PRK10982 244 --NK----PGEVILEVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKIN 313 (491)
T ss_pred --CC----CCCcEEEEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECC
Confidence 00 111259999999985 24999999999999999999999999999999999999999999999999998
Q ss_pred CCCHH-HHhcccEEEcccCc---CCC-CcHHHh-----cCCC----CCCC----HHHHHHHHHHcCCcHHHHhccCCccc
Q 000452 1315 LIGLH-DLRTRLSIIPQDPV---MFE-GTVRSN-----VDPL----EEYT----DEQIWEALDKCQLGDEVRKKEGKLDS 1376 (1495)
Q Consensus 1315 ~i~l~-~LR~~isiIpQdp~---LF~-GTIR~N-----Ldp~----~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt 1376 (1495)
..+.. .+|+.++|+||++. +|. .|+++| +... +..+ ++++.++++..++.+ +.+|.
T Consensus 314 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~ 387 (491)
T PRK10982 314 NHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKT------PGHRT 387 (491)
T ss_pred CCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccC------CCccc
Confidence 77654 35778999999963 565 477666 3211 1112 223455555555521 11233
Q ss_pred ccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEE
Q 000452 1377 KVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLL 1454 (1495)
Q Consensus 1377 ~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlV 1454 (1495)
+ ...||||||||++||||++++|+||||||||++||+.+...+.+.|++.. .+.|||+|||+++.+.. ||||++
T Consensus 388 ~----~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~ 463 (491)
T PRK10982 388 Q----IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILV 463 (491)
T ss_pred c----cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEE
Confidence 3 35799999999999999999999999999999999999999999997753 47999999999999865 999999
Q ss_pred EeCcEEEEecChhHHh
Q 000452 1455 LSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1455 L~~G~ivE~gsp~~Ll 1470 (1495)
|++|+++..++++++.
T Consensus 464 l~~g~i~~~~~~~~~~ 479 (491)
T PRK10982 464 MSNGLVAGIVDTKTTT 479 (491)
T ss_pred EECCEEEEEEccccCC
Confidence 9999999888775443
No 73
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=5.7e-62 Score=616.83 Aligned_cols=472 Identities=18% Similarity=0.213 Sum_probs=368.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHH
Q 000452 977 AFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVL 1056 (1495)
Q Consensus 977 ~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~ 1056 (1495)
.++..++.+++.++....+.+...+++.++++++++.|++||++.++|++++|+++|++.+...+. .+..++..++.++
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i 136 (547)
T PRK10522 58 LLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTL 136 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHH
Confidence 333345666778888889999999999999999999999999999999999999999999987654 4667788888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccH---HHHHHHHH
Q 000452 1057 GVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQE---SRFIDTNM 1133 (1495)
Q Consensus 1057 ~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e---~~f~~~~~ 1133 (1495)
+.++++++++|+++++++..+++.+++..++.+..+...+......+.+.+++.|.++|+.+|+ ++.+ +.+.+++.
T Consensus 137 ~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~ 215 (547)
T PRK10522 137 GSAAYLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYE 215 (547)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHh
Confidence 8999999999999988777766666666666666666666667788899999999999999996 4433 45666776
Q ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1134 ELMDGYSRPTFHVAAAMEWLGFRLDMLSNITF-AFSLVFLISIP-KGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMEN 1211 (1495)
Q Consensus 1134 ~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~-~~~~~~~~~~~-~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~ 1211 (1495)
+..+...+....... +......+..+.. ...+++++... .+..+.+.++....+.+.+...+..+...+.++..
T Consensus 216 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~ 291 (547)
T PRK10522 216 PDAQEYRHHIIRADT----FHLSAVNWSNIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLS 291 (547)
T ss_pred HHHHHHHhhhHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666655544333221 1111111111111 11111111110 11123333344444444555677788888889999
Q ss_pred HhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHH
Q 000452 1212 KIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTL 1291 (1495)
Q Consensus 1212 ~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTL 1291 (1495)
...+.+|+.++.+.|.|++. ++..+. |..+.|+++||+|+|+.+ +++|+|+||+|+|||++||||+||||||||
T Consensus 292 ~~~a~~ri~~l~~~~~~~~~--~~~~~~---~~~~~i~~~~v~f~y~~~-~~~l~~i~~~i~~G~~~aivG~sGsGKSTL 365 (547)
T PRK10522 292 AQVAFNKLNKLALAPYKAEF--PRPQAF---PDWQTLELRNVTFAYQDN-GFSVGPINLTIKRGELLFLIGGNGSGKSTL 365 (547)
T ss_pred HHHHHHHHHHHhcccccccc--cccccc---CcCceEEEEEEEEEeCCC-CeEEecceEEEcCCCEEEEECCCCCCHHHH
Confidence 99999999999765543221 111111 223679999999999743 469999999999999999999999999999
Q ss_pred HHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhcc
Q 000452 1292 IQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKE 1371 (1495)
Q Consensus 1292 l~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp 1371 (1495)
+++|+|+++|++|+|.+||+|+++++.+++|+++++|||||.+|+||+++| ..+.+|++++++++++++.+.+.. +
T Consensus 366 ~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~ 441 (547)
T PRK10522 366 AMLLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-E 441 (547)
T ss_pred HHHHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-c
Confidence 999999999999999999999999999999999999999999999999999 246789999999999999877653 4
Q ss_pred CCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhcc
Q 000452 1372 GKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVIDS 1449 (1495)
Q Consensus 1372 ~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~~ 1449 (1495)
+|. .+|.+||||||||++||||++++|+|||||||||+||+++++.|.+.+++.. +++|+|+||||++++..|
T Consensus 442 ~~~-----~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~ 516 (547)
T PRK10522 442 DGR-----ISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHA 516 (547)
T ss_pred ccC-----CCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhC
Confidence 442 2588999999999999999999999999999999999999999999998665 489999999999999999
Q ss_pred CEEEEEeCcEEEEe-cChhHH
Q 000452 1450 DMVLLLSHGLIEEY-DSPRKL 1469 (1495)
Q Consensus 1450 DrIlVL~~G~ivE~-gsp~~L 1469 (1495)
|+|++|++|+++|. |++.+-
T Consensus 517 d~i~~l~~G~i~e~~~~~~~~ 537 (547)
T PRK10522 517 DRLLEMRNGQLSELTGEERDA 537 (547)
T ss_pred CEEEEEECCEEEEecCCchhh
Confidence 99999999999998 444433
No 74
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.1e-60 Score=608.10 Aligned_cols=540 Identities=19% Similarity=0.254 Sum_probs=422.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 295 MFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIRLR 374 (1495)
Q Consensus 295 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~rir 374 (1495)
+++.+++.+++..++.++..++..+.|++++.++|.+...+. . ..+++.+++..++..+......+...++..+++
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD--V--LPTLALWAGFGVFNTIAYVLVAREADRLAHGRR 88 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456778888888999999999999999999999997754321 1 111111222233344444445566778888899
Q ss_pred HHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 375 AALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIASVAAFFGTVI 453 (1495)
Q Consensus 375 ~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~~i~ 453 (1495)
..+...+|+|.++++....+++++|+++++++.|++.+.+++. .+..+....+.+++++++++..-...+++.++++.+
T Consensus 89 ~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~ 168 (585)
T TIGR01192 89 ATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGIL 168 (585)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987653 333444455555544444443333333444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 454 FMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFVFWC 533 (1495)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~ 533 (1495)
...+...+.+..++.+++..+..++..+.+.|.++|+++||.++.|+.+.+++.+..++-.+...+..........+...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (585)
T TIGR01192 169 YILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRM 248 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555666777777788888888889999999999999999999999888777665443222222222211211111111
Q ss_pred HH--HHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCC
Q 000452 534 AP--TFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEKQPR 611 (1495)
Q Consensus 534 ~p--~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~ 611 (1495)
.. ..+.++.++.+.+.++.++.|.+++++.++..+..|+..+...+..+.+++.+++|+.++++.++..++.....+.
T Consensus 249 ~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~ 328 (585)
T TIGR01192 249 ASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPADAPEL 328 (585)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCccCCCC
Confidence 11 1233456677778888999999999999999999999999999999999999999999998765332111110011
Q ss_pred CCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe---------
Q 000452 612 GSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------- 682 (1495)
Q Consensus 612 ~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------- 682 (1495)
......++++|++|+|+. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 329 ~~~~~~i~~~~v~~~y~~--~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~ 406 (585)
T TIGR01192 329 PNVKGAVEFRHITFEFAN--SSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRES 406 (585)
T ss_pred CCCCCeEEEEEEEEECCC--CCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHH
Confidence 112246999999999963 246899999999999999999999999999999999999999999999883
Q ss_pred ----EEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 683 ----KAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 683 ----~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
++||||+|+++++|++|||.++.+ .++++..++++.+++++++..+|+|.+|.+|++|.+||||||||++||||+
T Consensus 407 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARal 486 (585)
T TIGR01192 407 LRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAI 486 (585)
T ss_pred HHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHH
Confidence 589999999999999999999864 577788888999999999999999999999999999999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCCchhH
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGTDFME 837 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 837 (1495)
+++|+++|||||||+||+++++.+.+ .+....+++|+|+|||+++.++.||+|++|++|++++.|+++++.++++.|.+
T Consensus 487 l~~p~ililDEpts~LD~~~~~~i~~-~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~ 565 (585)
T TIGR01192 487 LKNAPILVLDEATSALDVETEARVKN-AIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKDGRFYK 565 (585)
T ss_pred hcCCCEEEEECCccCCCHHHHHHHHH-HHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCCChHHH
Confidence 99999999999999999999888865 45555678999999999999988999999999999999999999988888887
Q ss_pred HHHH
Q 000452 838 LVDA 841 (1495)
Q Consensus 838 l~~~ 841 (1495)
+...
T Consensus 566 l~~~ 569 (585)
T TIGR01192 566 LLRR 569 (585)
T ss_pred HHHh
Confidence 7654
No 75
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=6.2e-61 Score=610.76 Aligned_cols=539 Identities=24% Similarity=0.337 Sum_probs=423.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 293 KAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIR 372 (1495)
Q Consensus 293 ~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~r 372 (1495)
+.+++ ++ .+....++.++..++....|+++..+++.+... ......+...+++..++..++.....+...+.+.+
T Consensus 8 ~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 82 (567)
T COG1132 8 LKYLK-YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLAD---LGELLELLLLLLLLALLGGVLRALQSYLGSRLGQK 82 (567)
T ss_pred HHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444 67 788888889999999999999999999987611 11122222223333334445555555666667789
Q ss_pred HHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHH
Q 000452 373 LRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWYIHDPWL-FLFEVALSFLILYKSLGI-ASVAAFFG 450 (1495)
Q Consensus 373 ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~w~-~pl~i~~~~~lL~~~lG~-~~l~gl~~ 450 (1495)
+...+...+|+|.++++....+++.+|++++++++|++.+.+.......+.. .++.++..+++++ .+.| .+++.+++
T Consensus 83 ~~~~lr~~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~l~~~~~ 161 (567)
T COG1132 83 IVADLRRDLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLF-SLSWRLALILLLI 161 (567)
T ss_pred HHHHHHHHHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999988766533333 3343444444443 3333 23333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 451 TVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFV 530 (1495)
Q Consensus 451 ~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~ 530 (1495)
..++..+...+.++.++..++..+..++..+.+.|.++|++++|.++.|+...++..+..++..+...+..........+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (567)
T COG1132 162 LPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPL 241 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455555678888888888999999999999999999999999876666554443333322222222222211
Q ss_pred -HHH-HHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC
Q 000452 531 -FWC-APTFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEK 608 (1495)
Q Consensus 531 -~~~-~p~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~ 608 (1495)
... .-..+.++.++.+.+..+.++.|.+.+++.++..+..|+..+...+..+.++..|.+|+.++++.++...+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~ 321 (567)
T COG1132 242 MLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP 321 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC
Confidence 111 112233444556666777899999999999999999999999999999999999999999999985532221111
Q ss_pred CCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------
Q 000452 609 QPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------ 682 (1495)
Q Consensus 609 ~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------ 682 (1495)
.......|+++|++|+|+. ++++|+|+||++++||++|||||+|||||||+++|+|+++|++|+|.+||.
T Consensus 322 --~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~ 397 (567)
T COG1132 322 --LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDIS 397 (567)
T ss_pred --CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcC
Confidence 1123346999999999973 468999999999999999999999999999999999999999999999883
Q ss_pred -------EEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHH
Q 000452 683 -------KAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIA 754 (1495)
Q Consensus 683 -------~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 754 (1495)
++||||+|++|++||+|||.+|++ .++++..++++.++++++++.+|+|.+|.+||+|.+||||||||++||
T Consensus 398 ~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiA 477 (567)
T COG1132 398 LDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIA 477 (567)
T ss_pred HHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHH
Confidence 599999999999999999999987 688999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCCc
Q 000452 755 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGTD 834 (1495)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~ 834 (1495)
||+++||+|++||||||+||+.+++.|.+. +....++||+|+|+|+++.+..||+|++|++|+|++.|+++|+++.++.
T Consensus 478 Rall~~~~ILILDEaTSalD~~tE~~I~~~-l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~~g~ 556 (567)
T COG1132 478 RALLRNPPILILDEATSALDTETEALIQDA-LKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAKGGL 556 (567)
T ss_pred HHHhcCCCEEEEeccccccCHHhHHHHHHH-HHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHcCCH
Confidence 999999999999999999999999988765 4455578999999999999999999999999999999999999999888
Q ss_pred hhHHHHHH
Q 000452 835 FMELVDAH 842 (1495)
Q Consensus 835 ~~~l~~~~ 842 (1495)
|.++...+
T Consensus 557 y~~l~~~~ 564 (567)
T COG1132 557 YARLYQAQ 564 (567)
T ss_pred HHHHHHHh
Confidence 99887654
No 76
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=7.9e-63 Score=624.26 Aligned_cols=481 Identities=22% Similarity=0.313 Sum_probs=335.6
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC--eEEEEccCCcccC
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQS 694 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--~~ayv~Q~~~l~~ 694 (1495)
.++++|++++|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ .++||+|+|++++
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~ 83 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQLDP 83 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCC
Confidence 6899999999952 35799999999999999999999999999999999999999999999864 6899999998875
Q ss_pred -ccHHHHHhcCCC-CC----------------HH-------HHHHH---HHHh-------CcHHHHhhcCCCCcccccCC
Q 000452 695 -GKIEDNILFGKE-MD----------------RE-------RYNAV---LDAC-------SLEKDLEILSFGDQTVVGER 739 (1495)
Q Consensus 695 -~ti~enI~fg~~-~~----------------~~-------~~~~v---l~~~-------~l~~dl~~l~~gd~t~ig~~ 739 (1495)
.|++||+.++.. +. .+ ++.++ ++.+ .+..-++.+... ....+
T Consensus 84 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~---~~~~~ 160 (556)
T PRK11819 84 EKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDALRCP---PWDAK 160 (556)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhCCCC---cccCc
Confidence 499999987631 00 00 00000 1100 011122222221 13567
Q ss_pred CCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCE
Q 000452 740 GINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGK 818 (1495)
Q Consensus 740 g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~ 818 (1495)
..+|||||||||+||||++.+|+++|||||||+||+...+++.+ ++... +.|+|+|||+++++.. ||+|++|++|+
T Consensus 161 ~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~-~L~~~--~~tviiisHd~~~~~~~~d~i~~l~~g~ 237 (556)
T PRK11819 161 VTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQ-FLHDY--PGTVVAVTHDRYFLDNVAGWILELDRGR 237 (556)
T ss_pred hhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHH-HHHhC--CCeEEEEeCCHHHHHhhcCeEEEEeCCE
Confidence 78999999999999999999999999999999999999888764 45443 3599999999999876 99999999999
Q ss_pred EE-EecChHHHHhcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchh
Q 000452 819 IT-QAGKYTDVINSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQ 897 (1495)
Q Consensus 819 i~-~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (1495)
++ +.|+++++.+... ...+.
T Consensus 238 i~~~~g~~~~~~~~~~-------~~~~~---------------------------------------------------- 258 (556)
T PRK11819 238 GIPWEGNYSSWLEQKA-------KRLAQ---------------------------------------------------- 258 (556)
T ss_pred EEEecCCHHHHHHHHH-------HHHHH----------------------------------------------------
Confidence 86 7898887643210 00000
Q ss_pred hhhhHHHHHhhcCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHH
Q 000452 898 RQLVQEEEREKGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALA 977 (1495)
Q Consensus 898 ~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~ 977 (1495)
..++.++.+ ..+.... -|+..
T Consensus 259 --~~~~~~~~~---------~~~~~~~-----------------------~~~~~------------------------- 279 (556)
T PRK11819 259 --EEKQEAARQ---------KALKREL-----------------------EWVRQ------------------------- 279 (556)
T ss_pred --HHHHHHHHH---------HHHHHHH-----------------------HHHHH-------------------------
Confidence 000000000 0000000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHH
Q 000452 978 FGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLG 1057 (1495)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~ 1057 (1495)
.+ .
T Consensus 280 -----------------------------------~~--------~---------------------------------- 282 (556)
T PRK11819 280 -----------------------------------SP--------K---------------------------------- 282 (556)
T ss_pred -----------------------------------hh--------h----------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHH
Q 000452 1058 VIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMD 1137 (1495)
Q Consensus 1058 ~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d 1137 (1495)
.+.. .
T Consensus 283 ---------------------------------~~~~-----~------------------------------------- 287 (556)
T PRK11819 283 ---------------------------------ARQA-----K------------------------------------- 287 (556)
T ss_pred ---------------------------------hhHH-----H-------------------------------------
Confidence 0000 0
Q ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 000452 1138 GYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVE 1217 (1495)
Q Consensus 1138 ~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sve 1217 (1495)
.+......+
T Consensus 288 -----------------------------------------------------------------------~~~~~~~~~ 296 (556)
T PRK11819 288 -----------------------------------------------------------------------SKARLARYE 296 (556)
T ss_pred -----------------------------------------------------------------------HHHHHHHHH
Confidence 000000000
Q ss_pred HHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhc
Q 000452 1218 RIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFR 1297 (1495)
Q Consensus 1218 Ri~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~r 1297 (1495)
|..+. .+.+.+.......++...+....|+++|++++|.. ..+|+||||+|++||++||+|+||||||||+++|.|
T Consensus 297 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G 372 (556)
T PRK11819 297 ELLSE--EYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGD--RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITG 372 (556)
T ss_pred Hhhcc--cccccCCCceeecCCCCCCCCeEEEEEeEEEEECC--eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 11000 00000000000001111112336999999999964 359999999999999999999999999999999999
Q ss_pred cccCCccEEEEcCEeCCCCCHHHHhcccEEEcccC-cCCCC-cHHHhcCCCC---C--CCHHHHHHHHHHcCCcHHHHhc
Q 000452 1298 IVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDP-VMFEG-TVRSNVDPLE---E--YTDEQIWEALDKCQLGDEVRKK 1370 (1495)
Q Consensus 1298 l~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp-~LF~G-TIR~NLdp~~---~--~sd~ei~~aL~~~~L~~~v~~l 1370 (1495)
+.+|++|+|.+++ + .+++|+||++ .++.. |+++|+.... . ..+++..++++..++.+..
T Consensus 373 ~~~p~~G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~--- 438 (556)
T PRK11819 373 QEQPDSGTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGGD--- 438 (556)
T ss_pred CCCCCCeEEEECC-c----------eEEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChhH---
Confidence 9999999999964 2 1699999997 56654 9999986321 1 1234456677777764211
Q ss_pred cCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-c
Q 000452 1371 EGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-S 1449 (1495)
Q Consensus 1371 p~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~ 1449 (1495)
++.. ...||||||||++||||++.+|++|||||||++||+.+...+.+.|++. + .|||+|||+++.+.. |
T Consensus 439 ---~~~~----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~ 509 (556)
T PRK11819 439 ---QQKK----VGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIA 509 (556)
T ss_pred ---hcCc----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhC
Confidence 1222 3469999999999999999999999999999999999999999999986 3 489999999998875 9
Q ss_pred CEEEEEeC-cEEEE-ecChhHHhhcC
Q 000452 1450 DMVLLLSH-GLIEE-YDSPRKLLENK 1473 (1495)
Q Consensus 1450 DrIlVL~~-G~ivE-~gsp~~Ll~~~ 1473 (1495)
|+|++|++ |++.+ .|+++++++++
T Consensus 510 d~i~~l~~~g~~~~~~g~~~~~~~~~ 535 (556)
T PRK11819 510 THILAFEGDSQVEWFEGNFQEYEEDK 535 (556)
T ss_pred CEEEEEECCCeEEEecCCHHHHHHHH
Confidence 99999986 88875 67788777653
No 77
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.1e-60 Score=604.31 Aligned_cols=511 Identities=20% Similarity=0.250 Sum_probs=399.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 299 VWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLS-GKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIRLRAAL 377 (1495)
Q Consensus 299 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~rir~~L 377 (1495)
+|+.++..+++.++..++..+.|++++.++|.+. +... ....+.+++.+++..++..++.....+...+++.++...+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (529)
T TIGR02857 1 ARRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEP-LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQL 79 (529)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777888899999999999999999999873 3221 1222334444455556666777777778888999999999
Q ss_pred HHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 378 IAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIASVAAFFGTVIFML 456 (1495)
Q Consensus 378 ~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~~i~~~~ 456 (1495)
...+|+|.++++....+++++|+++|++++|++.+.+++. .+..+....+..++++++++..-.+.+++.++.+.+...
T Consensus 80 r~~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 80 RERLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998654 355556555555555554443322223333333323333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 457 VNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFVFWCAPT 536 (1495)
Q Consensus 457 ~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~ 536 (1495)
+...+.+..++..++.++..+++.+.+.|.++|+++||.|++|+.+.+++.+.-++..+...+..........+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455666777788888999999999999999999999999999988887665433333222222222222221111111
Q ss_pred HH--HHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCC
Q 000452 537 FV--SVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEKQPRGSS 614 (1495)
Q Consensus 537 ~v--~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~ 614 (1495)
+. .++.++.+.+..+.++.+.+++++.++..+..|+..+...+..+.+++++++|+.++++.++.+.+... .+. ..
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~~-~~~-~~ 317 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKAP-VTA-AP 317 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcC-CCC-CC
Confidence 11 112334445557789999999999999999999999999999999999999999999975432211111 111 11
Q ss_pred cccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------
Q 000452 615 ETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1495)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------ 682 (1495)
...|+++|++|+|+.. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 318 ~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~ 396 (529)
T TIGR02857 318 APSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRD 396 (529)
T ss_pred CCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHh
Confidence 2369999999999742 357999999999999999999999999999999999999999999999984
Q ss_pred -EEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccC
Q 000452 683 -KAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQD 760 (1495)
Q Consensus 683 -~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1495)
++||+|+|++|++||+|||.++.+ .++++..++++.++++++++.+|+|.+|.+||+|.+||||||||++||||++++
T Consensus 397 ~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~ 476 (529)
T TIGR02857 397 QIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRD 476 (529)
T ss_pred heEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcC
Confidence 699999999999999999999865 678899999999999999999999999999999999999999999999999999
Q ss_pred CCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEE
Q 000452 761 ADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVI 814 (1495)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l 814 (1495)
|+|+|||||||+||+++++.+++. +....+++|+|+|||+++.+..||+|++|
T Consensus 477 ~~ililDE~ts~lD~~~~~~i~~~-l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 477 APLLLLDEPTAHLDAETEALVTEA-LRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCEEEEeCcccccCHHHHHHHHHH-HHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999765 45555789999999999999899999985
No 78
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.3e-60 Score=563.18 Aligned_cols=529 Identities=21% Similarity=0.293 Sum_probs=418.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 305 LTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIRLRAALIAMIYNK 384 (1495)
Q Consensus 305 ~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~rir~~L~~~iy~K 384 (1495)
+.+++.++..++...+.+++-.+++.+-..+. ...-+.++++++++.++.+++...-.....+.+.++|..|+..+++|
T Consensus 4 i~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~-~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~ 82 (559)
T COG4988 4 ISALLAVLSGIAIIAQAALLADILTKLIEGQL-FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDK 82 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777777777777777777766544332 23344556667777778888887777888899999999999999999
Q ss_pred HhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 385 GLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHD---PWLFLFEVALSFLILYKSLGIASVAAFFGTVIFMLVNVP 460 (1495)
Q Consensus 385 ~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~---~w~~pl~i~~~~~lL~~~lG~~~l~gl~~~i~~~~~~~~ 460 (1495)
..+++...-++.++|++.++++.-++.+..++. |++. .-..|+-+.++++...+.-++-.++..- ++.+..+.
T Consensus 83 l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~P---lIPlfMil 159 (559)
T COG4988 83 LAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAP---LIPLFMIL 159 (559)
T ss_pred HHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH---HHHHHHHH
Confidence 999999988899999999999999999887643 3333 3345555555555554433333222222 22222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 461 LSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSK----TIDLRKSESGWLKRCLYTSSITSFVFWCAPT 536 (1495)
Q Consensus 461 ~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~----i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~ 536 (1495)
+.+..++..++.++.-..--...-+-|+|+.++|.|+-.+...++ -++.|+.-|+.+|-.....++..++...+..
T Consensus 160 vg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiA 239 (559)
T COG4988 160 VGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIA 239 (559)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555556666666666666777899999999999987655554 4667899999888776666655554444333
Q ss_pred HHHHHHHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccC-CCCCCC
Q 000452 537 FVSVITFGTCILLK-VPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEK-QPRGSS 614 (1495)
Q Consensus 537 ~v~~~~f~~~~~~~-~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~-~~~~~~ 614 (1495)
++ .+ +...-+.+ ++++....|.++-+---+-.|++.+......-.++..+.+.+..|++.|....+..++ ......
T Consensus 240 lv-Av-~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~ 317 (559)
T COG4988 240 LV-AV-YIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEP 317 (559)
T ss_pred HH-HH-HHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCC
Confidence 32 22 33334455 5899999999998888889999999999999999999999999999988664432221 111112
Q ss_pred cccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------
Q 000452 615 ETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1495)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------ 682 (1495)
...+..+|++|.|+. ++++++|+||++++|++++|+|+||||||||+++|+|+.+|++|+|.+||.
T Consensus 318 ~~ei~~~~l~~~y~~--g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k 395 (559)
T COG4988 318 PIEISLENLSFRYPD--GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRK 395 (559)
T ss_pred CceeeecceEEecCC--CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHh
Confidence 234555699999974 348999999999999999999999999999999999999999999999983
Q ss_pred -EEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccC
Q 000452 683 -KAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQD 760 (1495)
Q Consensus 683 -~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1495)
++||+|+|.++++|+||||+++++ .+++...++++..+|.+.++. |+|.+|.+||+|.+|||||+|||+||||++++
T Consensus 396 ~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~ 474 (559)
T COG4988 396 QISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSP 474 (559)
T ss_pred HeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCC
Confidence 689999999999999999999987 678899999999999999998 99999999999999999999999999999999
Q ss_pred CCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCCchhHHHH
Q 000452 761 ADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGTDFMELVD 840 (1495)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~ 840 (1495)
+++|||||||++||+++++.|.+ .+....++||+|+|||+++.+..+|+|++|++|++++.|+++++.++++.|.+++.
T Consensus 475 ~~l~llDEpTA~LD~etE~~i~~-~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~ 553 (559)
T COG4988 475 ASLLLLDEPTAHLDAETEQIILQ-ALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLK 553 (559)
T ss_pred CCEEEecCCccCCCHhHHHHHHH-HHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHH
Confidence 99999999999999999877764 56667788999999999999999999999999999999999999999888998887
Q ss_pred HHH
Q 000452 841 AHK 843 (1495)
Q Consensus 841 ~~~ 843 (1495)
.+.
T Consensus 554 ~q~ 556 (559)
T COG4988 554 QQE 556 (559)
T ss_pred HHh
Confidence 643
No 79
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=3.3e-62 Score=618.61 Aligned_cols=479 Identities=21% Similarity=0.312 Sum_probs=335.9
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC--eEEEEccCCcccC
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQS 694 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--~~ayv~Q~~~l~~ 694 (1495)
.++++|++++|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.+++ .++|++|+|+++.
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~ 81 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLDP 81 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCCC
Confidence 5899999999952 35799999999999999999999999999999999999999999999974 6899999998874
Q ss_pred -ccHHHHHhcCCCC-------------------C--------HHHHHHHHHHhCcH-------HHHhhcCCCCcccccCC
Q 000452 695 -GKIEDNILFGKEM-------------------D--------RERYNAVLDACSLE-------KDLEILSFGDQTVVGER 739 (1495)
Q Consensus 695 -~ti~enI~fg~~~-------------------~--------~~~~~~vl~~~~l~-------~dl~~l~~gd~t~ig~~ 739 (1495)
.|++|||.++... + .+++.++++.++.. +-++.+... .....
T Consensus 82 ~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~---~~~~~ 158 (552)
T TIGR03719 82 TKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDALRCP---PWDAD 158 (552)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhCCCC---cccCc
Confidence 5999999875310 1 01233444444432 112222221 13567
Q ss_pred CCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCE
Q 000452 740 GINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGK 818 (1495)
Q Consensus 740 g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~ 818 (1495)
..+|||||||||+||||++.+|+++||||||++||+.+.+++.+ .+... ++|+|+|||+++++.. ||++++|++|+
T Consensus 159 ~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~-~L~~~--~~tvIiisHd~~~~~~~~d~v~~l~~g~ 235 (552)
T TIGR03719 159 VTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQ-HLQEY--PGTVVAVTHDRYFLDNVAGWILELDRGR 235 (552)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHH-HHHhC--CCeEEEEeCCHHHHHhhcCeEEEEECCE
Confidence 88999999999999999999999999999999999999888875 34433 4699999999999876 99999999999
Q ss_pred EE-EecChHHHHhcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchh
Q 000452 819 IT-QAGKYTDVINSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQ 897 (1495)
Q Consensus 819 i~-~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (1495)
++ ..|+++++.+... ...+.
T Consensus 236 i~~~~g~~~~~~~~~~-------~~~~~---------------------------------------------------- 256 (552)
T TIGR03719 236 GIPWEGNYSSWLEQKE-------KRLEQ---------------------------------------------------- 256 (552)
T ss_pred EEEecCCHHHHHHHHH-------HHHHH----------------------------------------------------
Confidence 76 7798887653210 00000
Q ss_pred hhhhHHHHHhhcCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHH
Q 000452 898 RQLVQEEEREKGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALA 977 (1495)
Q Consensus 898 ~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~ 977 (1495)
. ..+.++. ...+.... .|+. . .
T Consensus 257 -~-~~~~~~~---------~~~~~~~~-----------------------~~~~---~-----~---------------- 278 (552)
T TIGR03719 257 -E-EKEESAR---------QKALKREL-----------------------EWVR---S-----S---------------- 278 (552)
T ss_pred -H-HHHHHHH---------HHHHHHHH-----------------------HHHH---h-----h----------------
Confidence 0 0000000 00000000 0000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHH
Q 000452 978 FGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLG 1057 (1495)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~ 1057 (1495)
+
T Consensus 279 ------------------------------------~------------------------------------------- 279 (552)
T TIGR03719 279 ------------------------------------P------------------------------------------- 279 (552)
T ss_pred ------------------------------------h-------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHH
Q 000452 1058 VIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMD 1137 (1495)
Q Consensus 1058 ~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d 1137 (1495)
..++. +. +
T Consensus 280 --------------------------------~~~~~-------~~---------------------~------------ 287 (552)
T TIGR03719 280 --------------------------------KARQA-------KS---------------------K------------ 287 (552)
T ss_pred --------------------------------hhHHH-------HH---------------------H------------
Confidence 00000 00 0
Q ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 000452 1138 GYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVE 1217 (1495)
Q Consensus 1138 ~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sve 1217 (1495)
......+
T Consensus 288 -------------------------------------------------------------------------~~~~~~~ 294 (552)
T TIGR03719 288 -------------------------------------------------------------------------ARLARYE 294 (552)
T ss_pred -------------------------------------------------------------------------HHHHHHH
Confidence 0000000
Q ss_pred HHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhc
Q 000452 1218 RIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFR 1297 (1495)
Q Consensus 1218 Ri~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~r 1297 (1495)
+..+. . ++.++.......+...-+.+..|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|
T Consensus 295 ~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G 370 (552)
T TIGR03719 295 ELLSQ-E-FQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGD--KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITG 370 (552)
T ss_pred hhhhh-c-ccccCCCceeecCCCCCCCCeEEEEeeEEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcC
Confidence 10000 0 0000000000000000011235999999999964 359999999999999999999999999999999999
Q ss_pred cccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCc-CCC-CcHHHhcCCCC---CC--CHHHHHHHHHHcCCcHHHHhc
Q 000452 1298 IVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPV-MFE-GTVRSNVDPLE---EY--TDEQIWEALDKCQLGDEVRKK 1370 (1495)
Q Consensus 1298 l~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~-LF~-GTIR~NLdp~~---~~--sd~ei~~aL~~~~L~~~v~~l 1370 (1495)
+.+|++|+|.+++ + .+++|+||++. ++. -|+++|+.... .. .+.+..++++..++.+..
T Consensus 371 ~~~p~~G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~--- 436 (552)
T TIGR03719 371 QEQPDSGTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGSD--- 436 (552)
T ss_pred CCCCCCeEEEECC-c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChhH---
Confidence 9999999999964 2 16999999973 665 49999996321 11 133455677777764221
Q ss_pred cCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-c
Q 000452 1371 EGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-S 1449 (1495)
Q Consensus 1371 p~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~ 1449 (1495)
.+. ....||||||||++|||||+.+|+||||||||++||+.+...+.+.|++. . .|||+|+|+++.+.. |
T Consensus 437 ---~~~----~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~ 507 (552)
T TIGR03719 437 ---QQK----KVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIA 507 (552)
T ss_pred ---hcC----chhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhC
Confidence 122 23469999999999999999999999999999999999999999999986 3 489999999999876 9
Q ss_pred CEEEEEeC-cEEEEe-cChhHHhh
Q 000452 1450 DMVLLLSH-GLIEEY-DSPRKLLE 1471 (1495)
Q Consensus 1450 DrIlVL~~-G~ivE~-gsp~~Ll~ 1471 (1495)
|+|++|++ |+++++ |++.++.+
T Consensus 508 d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 508 THILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred CEEEEEECCCeEEEeCCCHHHHHH
Confidence 99999997 688754 66666654
No 80
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.3e-62 Score=550.51 Aligned_cols=455 Identities=25% Similarity=0.428 Sum_probs=353.5
Q ss_pred ccEEEEeeEEEecCCC-CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCC-----CCcEEEEcC--------
Q 000452 616 TAIEIADGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG-------- 681 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~-----~~G~v~~~g-------- 681 (1495)
..++++|++.++...+ ...++++|||++++||.+|+||++|||||-..++++|+++. -+|+|.++|
T Consensus 5 ~lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se 84 (534)
T COG4172 5 PLLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASE 84 (534)
T ss_pred cceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCH
Confidence 4688999988886432 45689999999999999999999999999999999999975 478999887
Q ss_pred ---------eEEEEccCCcc-cC--cc----HHHHHhcCCCCCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCC
Q 000452 682 ---------TKAYVAQSPWI-QS--GK----IEDNILFGKEMDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGI 741 (1495)
Q Consensus 682 ---------~~ayv~Q~~~l-~~--~t----i~enI~fg~~~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~ 741 (1495)
+|+.++|+|.- .| -| +.|-|...+.+.. ++..+.++..++.+- ...+...++
T Consensus 85 ~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p--------~~rl~~yPH 156 (534)
T COG4172 85 RQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEP--------EKRLDAYPH 156 (534)
T ss_pred HHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCch--------hhhhhhCCc
Confidence 47999999953 22 24 4555555444433 344445555555321 122456789
Q ss_pred ccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh--CCCEEEEEecCCCcccc-CCEEEEEeCCE
Q 000452 742 NLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--NSKTVLYVTHQVEFLPA-ADLVLVIKDGK 818 (1495)
Q Consensus 742 ~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvIlvTH~~~~l~~-~d~i~~l~~G~ 818 (1495)
+|||||||||.||.||..+||++|-||||.|||..+..+|.+ +++.+. .|..++++|||+..+.. ||+|+||.+|+
T Consensus 157 eLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~-Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ 235 (534)
T COG4172 157 ELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILD-LLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGE 235 (534)
T ss_pred ccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHH-HHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccE
Confidence 999999999999999999999999999999999999999986 444443 38899999999999987 99999999999
Q ss_pred EEEecChHHHHhcCC-chhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchh
Q 000452 819 ITQAGKYTDVINSGT-DFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQ 897 (1495)
Q Consensus 819 i~~~g~~~~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 897 (1495)
+++.|+.+++..... .|.+.+-
T Consensus 236 ivE~~~t~~lF~~PqHpYTr~Ll--------------------------------------------------------- 258 (534)
T COG4172 236 IVETGTTETLFAAPQHPYTRKLL--------------------------------------------------------- 258 (534)
T ss_pred EeecCcHHHHhhCCCChHHHHHH---------------------------------------------------------
Confidence 999998777653211 0000000
Q ss_pred hhhhHHHHHhhcCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHH
Q 000452 898 RQLVQEEEREKGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALA 977 (1495)
Q Consensus 898 ~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~ 977 (1495)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHH
Q 000452 978 FGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLG 1057 (1495)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~ 1057 (1495)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHH
Q 000452 1058 VIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMD 1137 (1495)
Q Consensus 1058 ~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d 1137 (1495)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 000452 1138 GYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVE 1217 (1495)
Q Consensus 1138 ~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sve 1217 (1495)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCC---------CCcceeeeeEEeeCCcEEEEEcCCCCCH
Q 000452 1218 RIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPH---------MPFVLRGISCTFPGEKKTGIVGRTGSGK 1288 (1495)
Q Consensus 1218 Ri~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~---------~~~vL~~Is~~I~~GekvgIVGrTGSGK 1288 (1495)
..|+. ...+|..-...--++.+||.+.|+-. .-.+.+||||+.++||.+||||+|||||
T Consensus 259 --------~aeP~----g~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGK 326 (534)
T COG4172 259 --------AAEPS----GDPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGK 326 (534)
T ss_pred --------hcCCC----CCCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCc
Confidence 00110 00011000111246667777766421 1247999999999999999999999999
Q ss_pred HHHHHHHhccccCCccEEEEcCEeCCCCCHHH---HhcccEEEcccCc--CC-CCcHHHhcC-------CC--CCCCHHH
Q 000452 1289 STLIQTLFRIVEPAAGQILIDGIDISLIGLHD---LRTRLSIIPQDPV--MF-EGTVRSNVD-------PL--EEYTDEQ 1353 (1495)
Q Consensus 1289 STLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR~~isiIpQdp~--LF-~GTIR~NLd-------p~--~~~sd~e 1353 (1495)
|||-++|+|+.++. |+|..+|.||...+.++ +|+++-+|.|||+ |= .-||-+-|. |. ..-.|+.
T Consensus 327 sTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~r 405 (534)
T COG4172 327 STLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQR 405 (534)
T ss_pred chHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHH
Confidence 99999999999876 99999999999998776 6899999999996 22 225555442 11 1123567
Q ss_pred HHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--
Q 000452 1354 IWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-- 1431 (1495)
Q Consensus 1354 i~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-- 1431 (1495)
+.+||+.+||+...... | ...||||||||++||||+.-+|++++||||||+||....+.|.+.+|+.-
T Consensus 406 v~~aL~EVGLDp~~r~R---Y-------PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k 475 (534)
T COG4172 406 VIEALEEVGLDPATRNR---Y-------PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQK 475 (534)
T ss_pred HHHHHHHcCCChhHhhc---C-------CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHH
Confidence 99999999998765432 2 34699999999999999999999999999999999999999999998764
Q ss_pred CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCCChHHH
Q 000452 1432 SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKSSSFSQ 1479 (1495)
Q Consensus 1432 ~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~ 1479 (1495)
.+-+-++|+|++..++. ||+|+||.+|+|||+|+-+++++++...|.+
T Consensus 476 ~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~ 524 (534)
T COG4172 476 HGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTR 524 (534)
T ss_pred hCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHH
Confidence 36799999999999975 9999999999999999999999998877654
No 81
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-61 Score=618.40 Aligned_cols=199 Identities=19% Similarity=0.334 Sum_probs=168.7
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++||+++|+. ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++. .+++
T Consensus 312 ~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ig 378 (638)
T PRK10636 312 LLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKLG 378 (638)
T ss_pred eEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEEE
Confidence 6999999999964 35999999999999999999999999999999999999999999999741 2699
Q ss_pred EEcccC--cCCC-CcHHHhcCC-CCCCCHHHHHHHHHHcCCcH-HHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 000452 1327 IIPQDP--VMFE-GTVRSNVDP-LEEYTDEQIWEALDKCQLGD-EVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1401 (1495)
Q Consensus 1327 iIpQdp--~LF~-GTIR~NLdp-~~~~sd~ei~~aL~~~~L~~-~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1401 (1495)
|+||++ .+.. .|+.+|+.. .....++++.++|+..++.+ ...+ + ...||||||||++||||+++
T Consensus 379 y~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~-------~----~~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 379 YFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGDKVTE-------E----TRRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred EecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChhHhcC-------c----hhhCCHHHHHHHHHHHHHhc
Confidence 999985 3443 388888642 22334567888888888753 3322 2 24699999999999999999
Q ss_pred CCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEE-EecChhHHhh
Q 000452 1402 RRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIE-EYDSPRKLLE 1471 (1495)
Q Consensus 1402 ~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~iv-E~gsp~~Ll~ 1471 (1495)
+|+||||||||++||..+...+.+.|++. +.|||+|+|++..+.. ||+|++|++|+++ ..|++++..+
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 99999999999999999999999999986 4599999999999875 9999999999998 5788888743
No 82
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.8e-58 Score=632.85 Aligned_cols=549 Identities=16% Similarity=0.196 Sum_probs=398.8
Q ss_pred hHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 289 LKLIKAMFRSVWKDV-LLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLE 367 (1495)
Q Consensus 289 ~~l~~al~~~~~~~~-~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~ 367 (1495)
.+.++..++..++.. ++.+++.++..++....|+.++...+............+.+ +.+++..++..++.....+...
T Consensus 952 ~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~-~iy~~l~i~~~~~~~~~~~~~~ 1030 (1522)
T TIGR00957 952 LSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRL-SVYGALGILQGFAVFGYSMAVS 1030 (1522)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 345555665543322 22233334445556667777776654211111111111111 1222222222232222334445
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 368 QLGIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIASVA 446 (1495)
Q Consensus 368 ~~g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~l~ 446 (1495)
..+.+.-..+...+|+|.++.+...++++++|+|+|+++.|++.+.+... .+..+...++.++.++++++....+.+++
T Consensus 1031 ~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~ 1110 (1522)
T TIGR00957 1031 IGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVI 1110 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66788888888999999999999999999999999999999999998654 44555566666666666555433333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 447 AFFGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSI 526 (1495)
Q Consensus 447 gl~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~ 526 (1495)
.+.++++...+..+..+..+..++.....+.......+|.++|+++||.|+||+.|.++..+.-+...+..........+
T Consensus 1111 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 1190 (1522)
T TIGR00957 1111 IPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRW 1190 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222233333334444444555556667778999999999999999999999888766555443332221111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-hcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Q 000452 527 TSFVFWCAPTFVSVITFGTCIL-LKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDL 605 (1495)
Q Consensus 527 ~~~~~~~~p~~v~~~~f~~~~~-~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~ 605 (1495)
..........++ ++..+.+.+ ..+.+++|.+..++.+...+..|+..+......+.++.+|.+||.+|++.++..+..
T Consensus 1191 ~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~ 1269 (1522)
T TIGR00957 1191 LAVRLECVGNCI-VLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQ 1269 (1522)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccc
Confidence 111111111111 112222233 346799999999999999999999999999999999999999999999765432211
Q ss_pred c-cCCCCC--CCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe
Q 000452 606 V-EKQPRG--SSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT 682 (1495)
Q Consensus 606 ~-~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~ 682 (1495)
. ...+.. +.++.|+++|++|+|+.+ .+++|+|+||+|++||++||||++|||||||+++|+|+++|++|+|.+||.
T Consensus 1270 ~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~ 1348 (1522)
T TIGR00957 1270 IQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGL 1348 (1522)
T ss_pred ccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCE
Confidence 1 111111 234579999999999743 357999999999999999999999999999999999999999999999993
Q ss_pred -------------EEEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHH
Q 000452 683 -------------KAYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQ 749 (1495)
Q Consensus 683 -------------~ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 749 (1495)
++||||+|.+|+|||||||....++++++..++++.|++.+.++.+|+|.+|.+||+|.+|||||||
T Consensus 1349 dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQ 1428 (1522)
T TIGR00957 1349 NIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQ 1428 (1522)
T ss_pred EccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHH
Confidence 5999999999999999999833368888999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHH
Q 000452 750 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVI 829 (1495)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~ 829 (1495)
|++||||++++|+|+|||||||+||+++.+.|. +.++...+++|+|+|+|+++.+..||+|++|++|+|++.|+++|++
T Consensus 1429 rl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq-~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl 1507 (1522)
T TIGR00957 1429 LVCLARALLRKTKILVLDEATAAVDLETDNLIQ-STIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLL 1507 (1522)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHH-HHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999987775 5566667899999999999999999999999999999999999999
Q ss_pred hcCCchhHHHHH
Q 000452 830 NSGTDFMELVDA 841 (1495)
Q Consensus 830 ~~~~~~~~l~~~ 841 (1495)
++++.|.+++..
T Consensus 1508 ~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1508 QQRGIFYSMAKD 1519 (1522)
T ss_pred hCCCHHHHHHHH
Confidence 887778887654
No 83
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=9.4e-60 Score=603.89 Aligned_cols=198 Identities=21% Similarity=0.326 Sum_probs=166.3
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +++
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 5999999999964 35999999999999999999999999999999999999999999999 4332 599
Q ss_pred EEcccC-cCCCC-cHHHhcCCC-CCC--C--HHHHHHHHHHcCCcH-HHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 000452 1327 IIPQDP-VMFEG-TVRSNVDPL-EEY--T--DEQIWEALDKCQLGD-EVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1398 (1495)
Q Consensus 1327 iIpQdp-~LF~G-TIR~NLdp~-~~~--s--d~ei~~aL~~~~L~~-~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1398 (1495)
|+||++ .++.. |+++|+... ... + +.++.+.|+..++.+ .. +.++ ..||||||||++||||
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~----~~LSgGekqRl~la~a 454 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPKRA-------MTPV----KALSGGERNRLLLARL 454 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHHHH-------hChh----hhCCHHHHHHHHHHHH
Confidence 999986 46655 999999632 111 2 456777787777642 22 2222 4699999999999999
Q ss_pred HccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEe-CcEEEEe-cChhHHh
Q 000452 1399 LLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLS-HGLIEEY-DSPRKLL 1470 (1495)
Q Consensus 1399 LLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~-~G~ivE~-gsp~~Ll 1470 (1495)
++.+|++|||||||++||..+...+.+.|++. +.|||+|||+.+.+.. ||+|++|+ +|++.++ |++.+.+
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~ 527 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDAR 527 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHH
Confidence 99999999999999999999999999999876 5699999999998865 99999998 8999986 5666654
No 84
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.4e-57 Score=529.48 Aligned_cols=542 Identities=22% Similarity=0.271 Sum_probs=394.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 290 KLIKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYAL-VSAFCVAKLVECLCQRFFVFRLEQ 368 (1495)
Q Consensus 290 ~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l-~~~l~~~~~~~~~~~~~~~~~~~~ 368 (1495)
++++..++ .|+.++++.+++++..++...-=.+-..+|....-.+......+.+ +++.=...+..+.....-...+..
T Consensus 6 p~i~l~~~-~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~ 84 (573)
T COG4987 6 PYLRLYKR-HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHD 84 (573)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 34555555 7777777777777665554433233333443211111100111222 222112222222222222222334
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q 000452 369 LGIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWYIHDPWLFLFEVALSFLIL--YKSLGIASVA 446 (1495)
Q Consensus 369 ~g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL--~~~lG~~~l~ 446 (1495)
...|+-+.++-.+|+|...++..-.....+|++.|++..|++.+++.+.....+|...+-++.+..+. |.-++.+.+.
T Consensus 85 AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll 164 (573)
T COG4987 85 ATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLL 164 (573)
T ss_pred HHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 46688999999999999999998888899999999999999999999999999988776666555443 4455566666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 447 AFFGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSI 526 (1495)
Q Consensus 447 gl~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~ 526 (1495)
++...++++.+...+.+.-++..++..+.+..-.....+.+.|+.-++++|-++.|.+.++ +.|..|.+..+....+
T Consensus 165 ~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~---~~e~~~~~~q~k~~~~ 241 (573)
T COG4987 165 GLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALE---ATEASWLKAQRKQARF 241 (573)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 6666666666667777777888888888888888889999999999999999999988754 4455444433332222
Q ss_pred ---HHHHHHH-HHHHHHHHHHH-HHHHhcCCcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 000452 527 ---TSFVFWC-APTFVSVITFG-TCILLKVPLE-SGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDE 600 (1495)
Q Consensus 527 ---~~~~~~~-~p~~v~~~~f~-~~~~~~~~L~-~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e 600 (1495)
..++... .-.++....++ .+..-.+..+ +..+...+..|..+..-....|.++..+.+...|.+|+.+.++.++
T Consensus 242 ~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~ 321 (573)
T COG4987 242 TGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKP 321 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCc
Confidence 2222211 11111111111 1111112233 2222223333333332222334777888899999999999887765
Q ss_pred CCcccccCCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEc
Q 000452 601 LQPDLVEKQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLC 680 (1495)
Q Consensus 601 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~ 680 (1495)
......++.+. .+..++++|++|+|+.+ +.++|+|+||++++||++||+|++|||||||++.|.|.++|++|+|..+
T Consensus 322 e~~~~~~~~~~--~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~ 398 (573)
T COG4987 322 EVTFPDEQTAT--TGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLN 398 (573)
T ss_pred ccCCCccccCC--ccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeEC
Confidence 43322111111 12279999999999854 4689999999999999999999999999999999999999999999999
Q ss_pred C-------------eEEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchH
Q 000452 681 G-------------TKAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGG 746 (1495)
Q Consensus 681 g-------------~~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGG 746 (1495)
| .+++++|.+.+|++|+|||+.++++ -++|...++++..+|++-++..|+|.+|.+||.|..||||
T Consensus 399 g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGG 478 (573)
T COG4987 399 GVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGG 478 (573)
T ss_pred CcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCch
Confidence 8 3578999999999999999999986 4678889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChH
Q 000452 747 QKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 747 QkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~ 826 (1495)
||||++|||++.+|++++||||||.+||+.|++++.+. +....+|||+|+|||++..++.+|+|++|++|+++++|+|+
T Consensus 479 E~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~l-l~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~ 557 (573)
T COG4987 479 ERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLAL-LFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHA 557 (573)
T ss_pred HHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHH-HHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHH
Confidence 99999999999999999999999999999999999864 44566899999999999999999999999999999999999
Q ss_pred HHHhcCCchhHHH
Q 000452 827 DVINSGTDFMELV 839 (1495)
Q Consensus 827 ~l~~~~~~~~~l~ 839 (1495)
+++.+++.|.++.
T Consensus 558 ~Ll~~~g~~~~l~ 570 (573)
T COG4987 558 ELLANNGRYKRLY 570 (573)
T ss_pred hhhccccHHHHHh
Confidence 9999877777654
No 85
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.3e-58 Score=627.65 Aligned_cols=211 Identities=21% Similarity=0.264 Sum_probs=177.7
Q ss_pred eEEEeeeeEEeCC-----------CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC--CccEEEEcCEeC
Q 000452 1247 KIDLRDLQVRYAP-----------HMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP--AAGQILIDGIDI 1313 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~-----------~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep--~~G~I~IDG~dI 1313 (1495)
.+.|+||++.++. +...+|+|||++|+|||.+||+|+||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6999999998752 123699999999999999999999999999999999999763 689999999886
Q ss_pred CCCCHHHHhcccEEEcccCcCCCC-cHHHhcCCC------CCCCHH----HHHHHHHHcCCcHHHHhccCCcccccccCC
Q 000452 1314 SLIGLHDLRTRLSIIPQDPVMFEG-TVRSNVDPL------EEYTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENG 1382 (1495)
Q Consensus 1314 ~~i~l~~LR~~isiIpQdp~LF~G-TIR~NLdp~------~~~sd~----ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G 1382 (1495)
.+ ...|+.++|++|++.++.. ||||||... .+.+++ .+.++++..+|.+. .|+.+|..+
T Consensus 947 ~~---~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 KQ---ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred Ch---HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 42 4577889999999988765 999999521 123333 36678888887643 366666544
Q ss_pred -CCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchh--hhccCEEEEEeC-
Q 000452 1383 -ENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITS--VIDSDMVLLLSH- 1457 (1495)
Q Consensus 1383 -~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~t--i~~~DrIlVL~~- 1457 (1495)
..||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. .++|||+++|+++. ...||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 6799999999999999999999999999999999999999999999865 47999999999984 356999999996
Q ss_pred cEEEEecChh
Q 000452 1458 GLIEEYDSPR 1467 (1495)
Q Consensus 1458 G~ivE~gsp~ 1467 (1495)
|+++.+|++.
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999874
No 86
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.3e-58 Score=534.19 Aligned_cols=485 Identities=19% Similarity=0.209 Sum_probs=364.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHH
Q 000452 974 VALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSII 1053 (1495)
Q Consensus 974 ~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~ 1053 (1495)
.++.++..++..+|+.++...|.+.-.++....+...+++|..--...+..+.+ +|++.+..++...-...++..=
T Consensus 70 l~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaP 145 (580)
T COG4618 70 LGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAP 145 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCc
Confidence 344556777888999999999999999999999999988877543333333444 3666666555332111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHH
Q 000452 1054 RVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNM 1133 (1495)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~ 1133 (1495)
-.-..+++++...|++.++.+.-.++.+.+.-.--...|+--+..++....-.++..-+.....+|+|.|+..+..+++.
T Consensus 146 W~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~ 225 (580)
T COG4618 146 WMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWG 225 (580)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHH
Confidence 12334556666777777665544433333322222333444444555666677888899999999999999887776665
Q ss_pred HHHHHhh----chHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1134 ELMDGYS----RPTFHVAAAMEWL-GFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQ 1208 (1495)
Q Consensus 1134 ~~~d~~~----~~~~~~~~~~~wl-~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~ 1208 (1495)
+....+. ++.-.......-- .+|+-+- +.+. .+-..+...|.+++|..-..-...-..-..+...+..|.+
T Consensus 226 ~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQ-s~iL---g~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq 301 (580)
T COG4618 226 RFNAAYLSAQERASDRNGAFGALSRALRMALQ-SAVL---GLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQ 301 (580)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-HHHH---hcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHH
Confidence 5544433 3222221111100 1111111 1111 1112234467788776433222222223445678888999
Q ss_pred HHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCH
Q 000452 1209 MENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGK 1288 (1495)
Q Consensus 1209 le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGK 1288 (1495)
+-....|..|+.+.+...+++....+- | - .+|.+.++++++.=++...++|+||||+++|||-+||||||||||
T Consensus 302 ~~~Ar~s~~Rl~~lL~~~p~~~~~m~L--P---~-P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGK 375 (580)
T COG4618 302 FVAARQSYKRLNELLAELPAAAERMPL--P---A-PQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGK 375 (580)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCCCC--C---C-CCceeeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccH
Confidence 999999999999998755443321111 1 1 268999999999666666689999999999999999999999999
Q ss_pred HHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCCC-CCCHHHHHHHHHHcCCcHHH
Q 000452 1289 STLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEV 1367 (1495)
Q Consensus 1289 STLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~v 1367 (1495)
|||.++|.|...|++|.|.+||-|+.+-+.+++=++|||.|||-.||+|||++||.-|+ +.+++.|.+|.+.++.+|.|
T Consensus 376 STLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelI 455 (580)
T COG4618 376 STLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELI 455 (580)
T ss_pred HHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHH
Confidence 99999999999999999999999999999999999999999999999999999998666 78889999999999999999
Q ss_pred HhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhh
Q 000452 1368 RKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSV 1446 (1495)
Q Consensus 1368 ~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti 1446 (1495)
.++|+||||.|||+|..||||||||++|||||+.+|+++|||||-||||.+-|+.+.++|.+.. +++|+|+||||++.+
T Consensus 456 l~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L 535 (580)
T COG4618 456 LRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSAL 535 (580)
T ss_pred HhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999987764 689999999999999
Q ss_pred hccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1447 IDSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1447 ~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
..+|+|+||++|++..||+-+|.+++
T Consensus 536 ~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 536 ASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred hhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999999999999999864
No 87
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-57 Score=593.48 Aligned_cols=528 Identities=17% Similarity=0.214 Sum_probs=412.1
Q ss_pred HHHHHhhHHHHHhhcccCCCC-CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccc
Q 000452 940 QILQIASNYWIAWATPASKDI-KPRVTGSMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFF 1018 (1495)
Q Consensus 940 ~~~~~~~~~wl~~~~~~~~~~-~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ff 1018 (1495)
.......|..+........+. .+......|....++..++.+++.-...+.....|.+.-..+-..++++.+|.+-.--
T Consensus 214 ~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~ 293 (1381)
T KOG0054|consen 214 DLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAIYRKALRLSNSAR 293 (1381)
T ss_pred HHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHhhhcCchhhc
Confidence 333667777766444332222 1122233344444444555555555555666788889989999999999999988777
Q ss_pred cccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 1019 DATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLV 1098 (1495)
Q Consensus 1019 d~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~ 1098 (1495)
..+..|+|+|-++.|.+.++...++ +..+...-++++..+.++...--+-+++.+.++++++-++.+..+..+..++..
T Consensus 294 ~~~t~G~ivNlms~D~~ri~~~~~~-~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~~ 372 (1381)
T KOG0054|consen 294 GETTVGEIVNLMSVDAQRLSDAACF-LHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKRL 372 (1381)
T ss_pred cCCCcchhhhhhhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999999999999986653 344444444444444433332222233444455666667777777788888888
Q ss_pred HHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000452 1099 GVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKG 1178 (1495)
Q Consensus 1099 ~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~ 1178 (1495)
...+.......+|.++|+++||.|+||+.|.++..+..+.-.+.............+.......++.+......+....+
T Consensus 373 m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~tF~~~v~~~~~ 452 (1381)
T KOG0054|consen 373 MKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVVTFVVFVLLLGN 452 (1381)
T ss_pred hhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 88999999999999999999999999999999998887766555544444444433333333332222222212213355
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeC
Q 000452 1179 FIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYA 1258 (1495)
Q Consensus 1179 ~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~ 1258 (1495)
..+|..+-.++++.-.+...+..+......+-+..+|++|+.+|+..++..+...+. .+.-+.+-.|+++|.+|++.
T Consensus 453 ~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~---~~~~~~~~~i~i~~~sfsW~ 529 (1381)
T KOG0054|consen 453 LLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVER---SPDEAGENAIEIKNGSFSWD 529 (1381)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCcccccc---CCCCCCCceEEEeeeeEecC
Confidence 678878888888888888888888888888888999999999999766544332221 11223445799999999998
Q ss_pred CC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCC
Q 000452 1259 PH-MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEG 1337 (1495)
Q Consensus 1259 ~~-~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~G 1337 (1495)
++ .++.|+||||+|++|+.+||||++|||||||+++++|.++..+|++.++|. ++|+||.|++|+|
T Consensus 530 ~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gs-------------iaYv~Q~pWI~ng 596 (1381)
T KOG0054|consen 530 SESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGS-------------VAYVPQQPWIQNG 596 (1381)
T ss_pred CCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCe-------------EEEeccccHhhCC
Confidence 74 445999999999999999999999999999999999999999999999984 9999999999999
Q ss_pred cHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCH
Q 000452 1338 TVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDT 1417 (1495)
Q Consensus 1338 TIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~ 1417 (1495)
||||||.+..+++++...++++.|+|.+.++.+|.|-.|.|||+|.|||||||||++||||++++++|.+||+|-|+||+
T Consensus 597 TvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDa 676 (1381)
T KOG0054|consen 597 TVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDA 676 (1381)
T ss_pred cHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-HHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHh
Q 000452 1418 ATDNL-IQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYT 1485 (1495)
Q Consensus 1418 ~Td~~-Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~ 1485 (1495)
++.+. .+++|+...+++|+|.|||.++.+.+||+|+||++|+|+|.|+++||++ .++.|.++..+..
T Consensus 677 hvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~-~~~~~~~l~~~~~ 744 (1381)
T KOG0054|consen 677 HVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLK-SGGDFAELAHEEE 744 (1381)
T ss_pred hhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHh-cchhHHHHhhccc
Confidence 99774 5678988889999999999999999999999999999999999999996 4678888855433
No 88
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.7e-57 Score=527.04 Aligned_cols=520 Identities=20% Similarity=0.292 Sum_probs=412.7
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCcc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 000452 314 TLATYVGPYLIDTLVQYLSGKRDFE---NEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIRLRAALIAMIYNKGLKLSS 390 (1495)
Q Consensus 314 ~~~~~~~P~ll~~li~~~~~~~~~~---~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~rir~~L~~~iy~K~L~ls~ 390 (1495)
-.+....|++++..++.+...+..+ ......+.+++++.+..+.+.-...+....+..++--.....+|+..+.++.
T Consensus 43 K~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~ 122 (591)
T KOG0057|consen 43 KILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDL 122 (591)
T ss_pred hHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 4556678999999999886332211 2234556667777777888877777777788888888888999999999999
Q ss_pred chhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Q 000452 391 QAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIASVA-AFFGTVIFMLVNVPLSTVQEKF 468 (1495)
Q Consensus 391 ~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~l~-gl~~~i~~~~~~~~~~~~~~~~ 468 (1495)
+...+..+|++.+.|..-...|.++.. .+..+....+++.+....+|...|.+..+ .+..+.....+...+.....++
T Consensus 123 ~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~f 202 (591)
T KOG0057|consen 123 SFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRF 202 (591)
T ss_pred HhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHH
Confidence 999999999999999988888887654 44566667788888888999999976433 3344444555666678888999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHH
Q 000452 469 QNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDL-RKSESGWLKRCLYTSSITSFVFWC-APT-FVSVITFGT 545 (1495)
Q Consensus 469 ~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~-R~~E~~~l~~~~~~~~~~~~~~~~-~p~-~v~~~~f~~ 545 (1495)
++++.++.|+-.+..-+.|.|-.+||.|+-|+.-.++.... ++.|-..++....+ ++.++..-. ..+ ++.++..+.
T Consensus 203 R~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl-~~lnfgQ~~iFsv~~~~im~l~~ 281 (591)
T KOG0057|consen 203 RKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSL-AFLNFGQKAIFSVALTFIMVLGS 281 (591)
T ss_pred HHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999877765432 33343333222222 222221110 111 111112222
Q ss_pred HHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccEEEEeeEE
Q 000452 546 CILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEKQPRGSSETAIEIADGNF 625 (1495)
Q Consensus 546 ~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~~ 625 (1495)
.-.....+|.+...-.-+++..|..|+..|......+.|+..-+.-....++.++...+ ...|....+..|+++|++|
T Consensus 282 ~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~--~~~~i~~~~~~I~F~dV~f 359 (591)
T KOG0057|consen 282 NGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQE--AALPIELFGGSIEFDDVHF 359 (591)
T ss_pred hhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhh--ccCCcccCCCcEEEEeeEE
Confidence 22345679999999999999999999999999999998888877666544333221111 0122223345699999999
Q ss_pred EecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------EEEEccCCcc
Q 000452 626 SWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KAYVAQSPWI 692 (1495)
Q Consensus 626 ~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ayv~Q~~~l 692 (1495)
+|.+ ++++|+++||+|++||++||+|+|||||||++++|++..+ .+|+|.+||. +|||||+..|
T Consensus 360 ~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~L 436 (591)
T KOG0057|consen 360 SYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVL 436 (591)
T ss_pred EeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccc
Confidence 9973 4579999999999999999999999999999999999999 9999999994 6999999999
Q ss_pred cCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCC
Q 000452 693 QSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFS 771 (1495)
Q Consensus 693 ~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~s 771 (1495)
||.||.+||.+|.+ ...++..++++..++++-+..+|+|++|.+||+|..|||||||||+||||+..||+|+++|||||
T Consensus 437 FndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS 516 (591)
T KOG0057|consen 437 FNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATS 516 (591)
T ss_pred cchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCccc
Confidence 99999999999987 46677778888999999999999999999999999999999999999999999999999999999
Q ss_pred ccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCCchhHHHH
Q 000452 772 AVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGTDFMELVD 840 (1495)
Q Consensus 772 aLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~ 840 (1495)
+||.++++.+++. +.....+||+|+|-|+++.++.||+|+++++|++.+.|+++|++.+.+.+.++..
T Consensus 517 ~LD~~TE~~i~~~-i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~ 584 (591)
T KOG0057|consen 517 ALDSETEREILDM-IMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWT 584 (591)
T ss_pred ccchhhHHHHHHH-HHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhc
Confidence 9999999999975 4557789999999999999999999999999999999999999997666666653
No 89
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.6e-58 Score=591.38 Aligned_cols=199 Identities=19% Similarity=0.299 Sum_probs=166.3
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
..|+++||+++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ +.++
T Consensus 507 ~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 507 PIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred ceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 469999999999643 3599999999999999999999999999999999999999999999875 3579
Q ss_pred EEEcccCcCCCCcHHHhcC-----CCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHc
Q 000452 1326 SIIPQDPVMFEGTVRSNVD-----PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLL 1400 (1495)
Q Consensus 1326 siIpQdp~LF~GTIR~NLd-----p~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALL 1400 (1495)
+|+||++. ..-++.+|.. .+...+++++.++|+..++.+.... .....||||||||++||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~~----------~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLAL----------QPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHhc----------CCccccCHHHHHHHHHHHHHh
Confidence 99999973 2224555421 1224567889999999998642211 123579999999999999999
Q ss_pred cCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEE-EecChhHH
Q 000452 1401 KRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIE-EYDSPRKL 1469 (1495)
Q Consensus 1401 r~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~iv-E~gsp~~L 1469 (1495)
++|++|||||||++||..+...+.+.+++. + .|||+|||+++.+.. ||+|++|++|+++ ..|++++.
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~ 712 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDY 712 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHH
Confidence 999999999999999999999999998875 3 599999999999875 9999999999998 45776654
No 90
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.1e-55 Score=607.40 Aligned_cols=470 Identities=16% Similarity=0.158 Sum_probs=359.4
Q ss_pred HHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 371 IRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIASVAAFF 449 (1495)
Q Consensus 371 ~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~ 449 (1495)
.+....+...+|++.++.+...+++++.|+|+|+++.|++.+.+.+. .+..+....+.++.++++++....+..++.+.
T Consensus 1027 ~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i~ 1106 (1560)
T PTZ00243 1027 RRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALVP 1106 (1560)
T ss_pred HHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445677889999999999999999999999999999999998654 44455555666666555554433322222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 450 GTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSF 529 (1495)
Q Consensus 450 ~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~ 529 (1495)
++++...+...+.+..+..++.....++.-...++|.++|+++||.|++|+.|.++..+.-+...+...+......+...
T Consensus 1107 ~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~ 1186 (1560)
T PTZ00243 1107 CGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGV 1186 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222223333444455555556666777789999999999999999999998888755444333322221111111111
Q ss_pred HH-HHH-HHHHHHHHHHHHH--HhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-c
Q 000452 530 VF-WCA-PTFVSVITFGTCI--LLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQP-D 604 (1495)
Q Consensus 530 ~~-~~~-p~~v~~~~f~~~~--~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~-~ 604 (1495)
.. ... ...+.++.++.+. .....++++.+..++.+...+..|+..+...+..+.++++|++||.+|++..+.++ .
T Consensus 1187 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~ 1266 (1560)
T PTZ00243 1187 RVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMP 1266 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 11 111 1111122222222 22345788888888888888999999999999999999999999999996322110 0
Q ss_pred c-----------------------c-cCC-----CCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecC
Q 000452 605 L-----------------------V-EKQ-----PRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTV 655 (1495)
Q Consensus 605 ~-----------------------~-~~~-----~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~ 655 (1495)
. . ... |.....+.|+++|++|+|+.+ .+++|+|+||+|++||++||||++
T Consensus 1267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~vL~~vsf~I~~GekVaIVGrT 1345 (1560)
T PTZ00243 1267 ELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLVLRGVSFRIAPREKVGIVGRT 1345 (1560)
T ss_pred cccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCceeecceEEECCCCEEEEECCC
Confidence 0 0 000 111123569999999999743 356999999999999999999999
Q ss_pred CccHHHHHHHHhCCCCCCCcEEEEcCe-------------EEEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcH
Q 000452 656 GSGKSSLLSCILGEVPKISGTLKLCGT-------------KAYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLE 722 (1495)
Q Consensus 656 GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~ 722 (1495)
|||||||+++|+|+++|++|+|.+||. ++||||+|.+|++||||||..+.++++++..++++.|+++
T Consensus 1346 GSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~l~ 1425 (1560)
T PTZ00243 1346 GSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVGLR 1425 (1560)
T ss_pred CCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHCCCh
Confidence 999999999999999999999999984 5999999999999999999887788899999999999999
Q ss_pred HHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccC-CCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000452 723 KDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQD-ADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQ 801 (1495)
Q Consensus 723 ~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~-~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~ 801 (1495)
+.++.+|+|.+|.+||+|.|||||||||++||||++++ |+|+|||||||+||+++.+.|. +.+....+++|+|+|+|+
T Consensus 1426 ~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq-~~L~~~~~~~TvI~IAHR 1504 (1560)
T PTZ00243 1426 ERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQ-ATVMSAFSAYTVITIAHR 1504 (1560)
T ss_pred HHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHH-HHHHHHCCCCEEEEEecc
Confidence 99999999999999999999999999999999999996 8999999999999999988875 556666789999999999
Q ss_pred CCccccCCEEEEEeCCEEEEecChHHHHhc-CCchhHHHHHH
Q 000452 802 VEFLPAADLVLVIKDGKITQAGKYTDVINS-GTDFMELVDAH 842 (1495)
Q Consensus 802 ~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~l~~~~ 842 (1495)
++.+..||+|++|++|+|++.|+++|++++ ++.|.+++...
T Consensus 1505 l~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1505 LHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred HHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 999999999999999999999999999974 67788877653
No 91
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.7e-57 Score=557.13 Aligned_cols=483 Identities=23% Similarity=0.352 Sum_probs=346.3
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC--eEEEEccCCcccC
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQS 694 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--~~ayv~Q~~~l~~ 694 (1495)
.|.++|++++|+ ++++++|+||++.+|++++|||+|||||||||++|.|+..|++|+|...+ +++|++|++....
T Consensus 3 ~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~~ 79 (530)
T COG0488 3 MITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLDP 79 (530)
T ss_pred eEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcCC
Confidence 588999999994 57899999999999999999999999999999999999999999999987 6999999998875
Q ss_pred -ccHHHHHhcCCCCC---HHHHHHHH---------------------HHhCcHHH----HhhcCCCCcccccCCCCccch
Q 000452 695 -GKIEDNILFGKEMD---RERYNAVL---------------------DACSLEKD----LEILSFGDQTVVGERGINLSG 745 (1495)
Q Consensus 695 -~ti~enI~fg~~~~---~~~~~~vl---------------------~~~~l~~d----l~~l~~gd~t~ig~~g~~LSG 745 (1495)
.||.|.+..+...- ..++++.. +...++.+ +..+...+ . .....+|||
T Consensus 80 ~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~--~-~~~~~~LSG 156 (530)
T COG0488 80 EKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPD--E-DRPVSSLSG 156 (530)
T ss_pred CccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCc--c-cCchhhcCH
Confidence 49999998774311 01111111 01111122 22232222 2 467789999
Q ss_pred HHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEE-Eec
Q 000452 746 GQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKIT-QAG 823 (1495)
Q Consensus 746 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~-~~g 823 (1495)
|||.||+|||||..+||++||||||++||..+..++- +.+. ..+| |+|+||||.+||.. |++|+.+++|++. +.|
T Consensus 157 G~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe-~~L~-~~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~G 233 (530)
T COG0488 157 GWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLE-DYLK-RYPG-TVIVVSHDRYFLDNVATHILELDRGKLTPYKG 233 (530)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHH-HHHH-hCCC-cEEEEeCCHHHHHHHhhheEEecCCceeEecC
Confidence 9999999999999999999999999999999988874 3343 2356 99999999999987 9999999999876 788
Q ss_pred ChHHHHhcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchhhhhhHH
Q 000452 824 KYTDVINSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQLVQE 903 (1495)
Q Consensus 824 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 903 (1495)
+|+.+.+....-.+.. . .. .+...+..++
T Consensus 234 ny~~~~~~r~~~~~~~--------------------------------------------~----~~---~~~~~~~~~~ 262 (530)
T COG0488 234 NYSSYLEQKAERLRQE--------------------------------------------A----AA---YEKQQKELAK 262 (530)
T ss_pred CHHHHHHHHHHHHHHH--------------------------------------------H----HH---HHHHHHHHHH
Confidence 8888764321000000 0 00 0000000000
Q ss_pred HHHhhcCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 000452 904 EEREKGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFC 983 (1495)
Q Consensus 904 e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~ 983 (1495)
++ .++.. ...
T Consensus 263 ~~------------~~i~r------------------------------~~~---------------------------- 272 (530)
T COG0488 263 EQ------------EWIRR------------------------------GKA---------------------------- 272 (530)
T ss_pred HH------------HHHHH------------------------------HHh----------------------------
Confidence 00 00000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000452 984 ILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMS 1063 (1495)
Q Consensus 984 ~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~ 1063 (1495)
T Consensus 273 -------------------------------------------------------------------------------- 272 (530)
T COG0488 273 -------------------------------------------------------------------------------- 272 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchH
Q 000452 1064 LVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPT 1143 (1495)
Q Consensus 1064 ~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~ 1143 (1495)
...+++
T Consensus 273 -----------------------~~~~~k--------------------------------------------------- 278 (530)
T COG0488 273 -----------------------AASKAK--------------------------------------------------- 278 (530)
T ss_pred -----------------------ccchHH---------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH-
Q 000452 1144 FHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQY- 1222 (1495)
Q Consensus 1144 ~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~- 1222 (1495)
..+..+...+|+.+-
T Consensus 279 ----------------------------------------------------------------~a~sr~k~l~k~~~~~ 294 (530)
T COG0488 279 ----------------------------------------------------------------KAKSRIKRLEKLEARL 294 (530)
T ss_pred ----------------------------------------------------------------HHHHHHHHHHHHHhhh
Confidence 000000111111110
Q ss_pred -hcCCCCCCCccc-cCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc
Q 000452 1223 -TCIPSEPPLEIE-ESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE 1300 (1495)
Q Consensus 1223 -~~~~~E~~~~~~-~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e 1300 (1495)
...|.+...... ...++..-+.+-.++++|+++.|.++ .++++++||.|.+|++||||||+|+|||||+++|.|...
T Consensus 295 ~~~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~ 373 (530)
T COG0488 295 AEERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELG 373 (530)
T ss_pred hhcccccccccceeeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcc
Confidence 000111000000 00111111223469999999999766 569999999999999999999999999999999999999
Q ss_pred CCccEEEEcCEeCCCCCHHHHhcccEEEcccC-cCCC-CcHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhccCCcccc
Q 000452 1301 PAAGQILIDGIDISLIGLHDLRTRLSIIPQDP-VMFE-GTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSK 1377 (1495)
Q Consensus 1301 p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp-~LF~-GTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~ 1377 (1495)
|.+|+|.+.- .-++||.+|+- .++. .|+-+++.... +..+.++...|.+.++...-. .++
T Consensus 374 ~~~G~v~~g~-----------~v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~~------~~~ 436 (530)
T COG0488 374 PLSGTVKVGE-----------TVKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGEDQ------EKP 436 (530)
T ss_pred cCCceEEeCC-----------ceEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChHHH------hCc
Confidence 9999999863 13599999998 4443 38999986443 444889999999999864432 223
Q ss_pred cccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEe
Q 000452 1378 VTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLS 1456 (1495)
Q Consensus 1378 v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~ 1456 (1495)
| ..||||||-|+.||+.++.+|.+|||||||..||.+|-..+.++|.+. +-|||+|+|+-..+.. |++|++++
T Consensus 437 v----~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~ 510 (530)
T COG0488 437 V----GVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRVATRIWLVE 510 (530)
T ss_pred h----hhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEc
Confidence 3 469999999999999999999999999999999999999999999987 6799999999999986 99999999
Q ss_pred CcEEEEe-cChhHHhhc
Q 000452 1457 HGLIEEY-DSPRKLLEN 1472 (1495)
Q Consensus 1457 ~G~ivE~-gsp~~Ll~~ 1472 (1495)
+ ++.++ |.+++..+.
T Consensus 511 ~-~~~~~~g~y~~y~~~ 526 (530)
T COG0488 511 D-KVEEFEGGYEDYLEQ 526 (530)
T ss_pred C-ceeEcCCCHHHHHHh
Confidence 9 88888 788877754
No 92
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.9e-55 Score=557.41 Aligned_cols=512 Identities=16% Similarity=0.136 Sum_probs=376.7
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 294 AMFR-SVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIR 372 (1495)
Q Consensus 294 al~~-~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~r 372 (1495)
.+++ .+|+.+++.+++.++..++..+.|++++.+++...... .. ...+.+++++ +..++.....+...+.+.+
T Consensus 10 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~--~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 83 (555)
T TIGR01194 10 ALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFLG--QG-SLFSFGGLCL---LALLFRIGADIFPAYAGMH 83 (555)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--ch-HHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Confidence 3667 78888999999999999999999999988876321110 01 1111111222 2233444445556778889
Q ss_pred HHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 373 LRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWYIHDPWLFLFEVALSFLILYKSLGIASVAAFFGTV 452 (1495)
Q Consensus 373 ir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~~i 452 (1495)
+...++..+|+|.++++.....++++|++++++++|++.+.++...+..+....+.+++++++++..-...+++.++.+.
T Consensus 84 ~~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~ 163 (555)
T TIGR01194 84 IIANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAITISAII 163 (555)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999899999999999999999999876555555555555555555554333223333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 453 IFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWEL--KFLSKTIDLRKSESGWLKRCLYTSSITSFV 530 (1495)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~--~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~ 530 (1495)
+.+.+..+..++.++...+..+..++..+.+.|.++|++++|.++.++ ...+++.+..++-.+...+..........+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (555)
T TIGR01194 164 IGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENF 243 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444445556666777778888888999999999999999999854 333333322221111111111111111111
Q ss_pred HHHHHHHHHHHHHHHHHH---hcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc--
Q 000452 531 FWCAPTFVSVITFGTCIL---LKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDL-- 605 (1495)
Q Consensus 531 ~~~~p~~v~~~~f~~~~~---~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~-- 605 (1495)
...... +.++.+++ ..+.++.+.+++++.+...+..|+..+...+..+.++++|++||.++++.++.++..
T Consensus 244 ~~~~~~----~~~~~~~~~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~ 319 (555)
T TIGR01194 244 GQLLFF----LLIGCALFAAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELE 319 (555)
T ss_pred HHHHHH----HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence 111111 11111111 124789999999999999999999999999999999999999999998632211100
Q ss_pred -ccCC-----CCCCCcccEEEEeeEEEecCCC--CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEE
Q 000452 606 -VEKQ-----PRGSSETAIEIADGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTL 677 (1495)
Q Consensus 606 -~~~~-----~~~~~~~~i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v 677 (1495)
.... +.......|+++|++|+|+..+ .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|
T Consensus 320 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i 399 (555)
T TIGR01194 320 LSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEI 399 (555)
T ss_pred ccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEE
Confidence 0000 1111234699999999997431 2469999999999999999999999999999999999999999999
Q ss_pred EEcCe-------------EEEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccc
Q 000452 678 KLCGT-------------KAYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLS 744 (1495)
Q Consensus 678 ~~~g~-------------~ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LS 744 (1495)
.++|. ++||+|+|++|++|+++|+ ..+.++++.+++++.++++++++.+|+|++|. .+||
T Consensus 400 ~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LS 472 (555)
T TIGR01194 400 LLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALS 472 (555)
T ss_pred EECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc-----ccCC
Confidence 99984 4899999999999999995 33456778889999999999999999999983 7999
Q ss_pred hHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCccccCCEEEEEeCCEEEEe
Q 000452 745 GGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPAADLVLVIKDGKITQA 822 (1495)
Q Consensus 745 GGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~ 822 (1495)
||||||++||||++++|+|+|||||||+||+++++.+.+.++... .+++|+|+|||+++.+..||+|++|++|++++.
T Consensus 473 gGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 473 TGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999999987665443 468999999999998888999999999999863
No 93
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=5.1e-56 Score=569.75 Aligned_cols=511 Identities=14% Similarity=0.088 Sum_probs=402.2
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 929 VPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTG----SMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFN 1004 (1495)
Q Consensus 929 ~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~----~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~ 1004 (1495)
+.+.+++.++...+.+..+++.....+.....+. ... ..++.+++++.++..+..++...+......+..+.+|+
T Consensus 98 l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~-~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~ 176 (659)
T TIGR00954 98 LILIAFLLVSRTYLSVYVATLDGQIESSIVRRSP-RNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLYS 176 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455566677788888887755532111110 001 11222333344445555555666666667777788888
Q ss_pred HHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 000452 1005 KMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSL-VAWQVFIVFIPVIATCIWY 1083 (1495)
Q Consensus 1005 ~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~v~ip~~~~~~~~ 1083 (1495)
+.+++....++.|||. ++|++++|+++|++.+...+...+..++..++.+++.++++.. .+|.+.++++...++..++
T Consensus 177 ~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i 255 (659)
T TIGR00954 177 KYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVV 255 (659)
T ss_pred HHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 8888877888899997 8999999999999999999999999999999999988887776 8898888888888888888
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 000452 1084 QQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNI 1163 (1495)
Q Consensus 1084 ~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~ 1163 (1495)
.+++.+..+++.+......+...+.+.|.++|+.+||+|+.|+.+.+++.+..++..+..........++....+++...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 335 (659)
T TIGR00954 256 LTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKY 335 (659)
T ss_pred HHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999888888887777777777776666665432
Q ss_pred HHHHH----HHHHHHhcC----CCCCHHH-HHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCCC
Q 000452 1164 TFAFS----LVFLISIPK----GFIDPAI-AGLAVTY---GLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPL 1231 (1495)
Q Consensus 1164 ~~~~~----~~~~~~~~~----~~~~~~~-~gl~l~~---~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~~~ 1231 (1495)
..... ....+.... |.++.|. ++..++| ..++...+..+.....++.....+.+|+.++.+.++|...
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~~ 415 (659)
T TIGR00954 336 TWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVKS 415 (659)
T ss_pred HHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 11111 111122212 5677664 3434444 4455777888899999999999999999999875332110
Q ss_pred ------cccc---C-----CCC------CCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHH
Q 000452 1232 ------EIEE---S-----RPN------HSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTL 1291 (1495)
Q Consensus 1232 ------~~~~---~-----~~~------~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTL 1291 (1495)
..++ . +++ ......+.|+++||+++|+.+ +++|+|+||+|++||++||+|+||||||||
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGKSTL 494 (659)
T TIGR00954 416 GNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGKSSL 494 (659)
T ss_pred ccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCCHHHH
Confidence 0000 0 000 000134679999999999644 469999999999999999999999999999
Q ss_pred HHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCC--------CCCCHHHHHHHHHHcCC
Q 000452 1292 IQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL--------EEYTDEQIWEALDKCQL 1363 (1495)
Q Consensus 1292 l~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~--------~~~sd~ei~~aL~~~~L 1363 (1495)
+++|.|+++|++|+|.+|+ |++++++||+|.+|++|+|+|+... .+.++++++++++++++
T Consensus 495 l~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l 563 (659)
T TIGR00954 495 FRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQL 563 (659)
T ss_pred HHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCC
Confidence 9999999999999999874 6789999999999999999999632 34678999999999999
Q ss_pred cHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCc
Q 000452 1364 GDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRI 1443 (1495)
Q Consensus 1364 ~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl 1443 (1495)
.+++.+ |.|+||..+ .+.+||||||||++||||++++|++||||||||+||+++++.+++.+++. ++|+|+||||+
T Consensus 564 ~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~~ 639 (659)
T TIGR00954 564 THILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHRK 639 (659)
T ss_pred HHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCch
Confidence 999877 999999876 56799999999999999999999999999999999999999999999885 89999999999
Q ss_pred hhhhccCEEEEEeC
Q 000452 1444 TSVIDSDMVLLLSH 1457 (1495)
Q Consensus 1444 ~ti~~~DrIlVL~~ 1457 (1495)
+++..||+|++|+.
T Consensus 640 ~~~~~~d~il~l~~ 653 (659)
T TIGR00954 640 SLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHhCCEEEEEeC
Confidence 99999999999973
No 94
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=3.1e-55 Score=506.35 Aligned_cols=529 Identities=21% Similarity=0.263 Sum_probs=427.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 290 KLIKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQL 369 (1495)
Q Consensus 290 ~l~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 369 (1495)
....+..-.+++.++..+++..+-.++...+|+++-++-|-+-...+.+ .-..+.++....+++..+++..-.+...|+
T Consensus 12 ~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~-TLv~Ltvlal~ly~~~glLd~iR~~~l~Ri 90 (580)
T COG4618 12 NLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVP-TLVMLTVLALGLYAFQGLLDAIRSRVLVRI 90 (580)
T ss_pred chhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677777888888888888889999999998877777765543322 234455555667778888898899999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-----HhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 370 GIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-----YIHDPWLFLFEVALSFLILYKSLGIAS 444 (1495)
Q Consensus 370 g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-----~~~~~w~~pl~i~~~~~lL~~~lG~~~ 444 (1495)
|.++...|...||.-+++.....+......+.+ .|.+.+..|.. -+.+....|+-+.+++ ++.-.+|+.+
T Consensus 91 g~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~f-l~Hp~lG~~a 165 (580)
T COG4618 91 GERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIF-LFHPWLGLIA 165 (580)
T ss_pred HHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHHHH-HHHHHHHHHH
Confidence 999999999999999976555443322333443 48888888753 2334444576555553 4445789888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 445 VAAFFGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTS 524 (1495)
Q Consensus 445 l~gl~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~ 524 (1495)
++|.++++.+..+|-..++ +--++-.+..-+|.......++|..+|+.+|+.+...+++.+....-+.+..+.....
T Consensus 166 ~~ga~iLv~la~ln~~~t~---~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~ 242 (580)
T COG4618 166 LAGAIILVVLALLNERATR---KPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRN 242 (580)
T ss_pred HHHHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 8888888887777765554 3455667777888899999999999999999999999999888877777666555444
Q ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 000452 525 SITSFVFWCAPTFV--SVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQ 602 (1495)
Q Consensus 525 ~~~~~~~~~~p~~v--~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~ 602 (1495)
.....+.-..-.+. .++..|.|..+.+++|+|.+++.--+..-.-.|+......+..+..++.|.+|++++|......
T Consensus 243 ~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~ 322 (580)
T COG4618 243 GAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAA 322 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 33333322223333 3345667888899999999998877777778899999999999999999999999999764332
Q ss_pred cccccCCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC-
Q 000452 603 PDLVEKQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG- 681 (1495)
Q Consensus 603 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g- 681 (1495)
... .+-+..+..+.++++++.-+ +.++|+|+|+||++++||.++|+||+|||||||.++|.|..+|.+|+|++||
T Consensus 323 ~~~---m~LP~P~g~L~Ve~l~~~PP-g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga 398 (580)
T COG4618 323 AER---MPLPAPQGALSVERLTAAPP-GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGA 398 (580)
T ss_pred cCC---CCCCCCCceeeEeeeeecCC-CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecch
Confidence 221 22233456799999999664 4568999999999999999999999999999999999999999999999998
Q ss_pred ------------eEEEEccCCcccCccHHHHHh-cCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 682 ------------TKAYVAQSPWIQSGKIEDNIL-FGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 682 ------------~~ayv~Q~~~l~~~ti~enI~-fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
.+||.||+-.+|.|||.|||. |+.+.|.++.-++.+..+.++-+-.+|+|++|.||+.|.+||||||
T Consensus 399 ~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQR 478 (580)
T COG4618 399 DLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQR 478 (580)
T ss_pred hhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHH
Confidence 479999999999999999994 8878899998888899999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDV 828 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l 828 (1495)
|||+||||+|.||.+++||||-|+||...+..+.+.+..-..+|.|+|+|||+++.+..+|+|++|+||++...|+.+|+
T Consensus 479 QRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eV 558 (580)
T COG4618 479 QRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEV 558 (580)
T ss_pred HHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHH
Confidence 99999999999999999999999999998888876555555679999999999999999999999999999999999998
Q ss_pred Hhc
Q 000452 829 INS 831 (1495)
Q Consensus 829 ~~~ 831 (1495)
+++
T Consensus 559 La~ 561 (580)
T COG4618 559 LAK 561 (580)
T ss_pred HHH
Confidence 753
No 95
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.5e-57 Score=573.41 Aligned_cols=191 Identities=21% Similarity=0.312 Sum_probs=163.4
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.++++|++++|.. ..|+++||+|++||++||+|+||||||||+++|.|+.+|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 5999999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred EEcccCcC-CCCcHHHhcCCC-CCC-CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 000452 1327 IIPQDPVM-FEGTVRSNVDPL-EEY-TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRR 1403 (1495)
Q Consensus 1327 iIpQdp~L-F~GTIR~NLdp~-~~~-sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1403 (1495)
|+||++.+ ++.|+++|+... ..+ .+..+.++++..++.+...+. ...||||||||++|||||+++|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~~~~-----------~~~LSGGe~QRvaiAraL~~~p 472 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLLDKN-----------VKDLSGGELQRVAIAACLSRDA 472 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHHhCC-----------cccCCHHHHHHHHHHHHHhcCC
Confidence 99999875 466999999632 222 234567788888886543322 2469999999999999999999
Q ss_pred CeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecC
Q 000452 1404 KILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDS 1465 (1495)
Q Consensus 1404 ~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gs 1465 (1495)
+||||||||++||.++...+.+.|++..+ ++|||+|+|+++.+.. ||||++|++ ++...|+
T Consensus 473 ~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 473 DLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 99999999999999999999999998743 7899999999998865 999999964 8877766
No 96
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-56 Score=506.48 Aligned_cols=529 Identities=19% Similarity=0.277 Sum_probs=394.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCCCCcchh-HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 308 LVAIVCTLATYVGPYLIDTLVQYLSGKRDFENE-GYALVSAFCVAK--LVECLCQRFFVFRLEQLGIRLRAALIAMIYNK 384 (1495)
Q Consensus 308 ~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~-g~~l~~~l~~~~--~~~~~~~~~~~~~~~~~g~rir~~L~~~iy~K 384 (1495)
++.++.-++....|.+.+.+++-+..+..+.+. .+.++...++-. ....+......|...++..--.-.+...+|++
T Consensus 222 ~ll~i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrH 301 (790)
T KOG0056|consen 222 FLLIIGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRH 301 (790)
T ss_pred HHHHHHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHH
Confidence 344455556666799999999988744322221 122222222111 01123344444444455555555677889999
Q ss_pred HhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH
Q 000452 385 GLKLSSQAKQGNTSGEIINFMTVDAERVAELSWYIHDPWLFLFEVALSFLILYKSLGIASVAAFFGTVI---FMLVNVPL 461 (1495)
Q Consensus 385 ~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~~~i~---~~~~~~~~ 461 (1495)
.+.||....-++.+||+...|....+.+.-.-.-+.++-...+.++++++.. .+-.-...|+++.+. ..-+.+.+
T Consensus 302 lh~LSlrwHL~rrtGeVLrvmdrGtssvtll~yvVF~i~PtllDl~va~vYF--~~~Fn~wFgLIVfl~m~lY~~~Ti~i 379 (790)
T KOG0056|consen 302 LHNLSLRWHLNRRTGEVLRVMDRGTSSVTLLEYVVFQIGPTLLDLGVAMVYF--FIKFNIWFGLIVFLMMLLYCYVTIKI 379 (790)
T ss_pred HHhhceeeeecccccceeehhccCcchhhHHHHHHhhcccHHHHhhhhhhhh--hhhHhHHHHHHHHHHHHHHhheeeee
Confidence 9999998887888999988887666655522222233333444555554443 333334445544433 33333344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 462 STVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELK----FLSKTIDLRKSESGWLKRCLYTSSITSFVFWCAPTF 537 (1495)
Q Consensus 462 ~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~----f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~~p~~ 537 (1495)
.....++++++..+-.+-...-.+.|-|..++|.|+-|+. +.+.|.+..++|-+.+.....+......++-. -+
T Consensus 380 TeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~l--gl 457 (790)
T KOG0056|consen 380 TEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGL--GL 457 (790)
T ss_pred ehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh--HH
Confidence 5556777777766655555666788999999999998875 45556666666666554444333322222111 11
Q ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCccc
Q 000452 538 VSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEKQPRGSSETA 617 (1495)
Q Consensus 538 v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~ 617 (1495)
.....+.+|.+..+.+|.|...-...++-.|..|++.+.....++....+-++|+.+.|++++...+.....|-....+.
T Consensus 458 l~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~~~G~ 537 (790)
T KOG0056|consen 458 LAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKVTQGK 537 (790)
T ss_pred hhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccccCCe
Confidence 22233445666677899999888888999999999999999999999999999999999776543332222233334568
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 684 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~a 684 (1495)
|+++|++|+|++ .+|+|+||||++++|+.+|+|||+|+||||+++++.+.++..+|+|.+||. +|
T Consensus 538 i~fsnvtF~Y~p--~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IG 615 (790)
T KOG0056|consen 538 IEFSNVTFAYDP--GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIG 615 (790)
T ss_pred EEEEEeEEecCC--CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcC
Confidence 999999999974 579999999999999999999999999999999999999999999999994 69
Q ss_pred EEccCCcccCccHHHHHhcCCCC-CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCE
Q 000452 685 YVAQSPWIQSGKIEDNILFGKEM-DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADI 763 (1495)
Q Consensus 685 yv~Q~~~l~~~ti~enI~fg~~~-~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 763 (1495)
.|||+.-+||.||..||.++++- ..|...++.++.++++.+-.+|+|+.|.+||||-.||||+||||++||++.++|.|
T Consensus 616 VVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~i 695 (790)
T KOG0056|consen 616 VVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSI 695 (790)
T ss_pred cccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcE
Confidence 99999999999999999999873 44556667889999999999999999999999999999999999999999999999
Q ss_pred eEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhc-CCchhHHHHHH
Q 000452 764 YLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINS-GTDFMELVDAH 842 (1495)
Q Consensus 764 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~~~~l~~~~ 842 (1495)
++|||.|||||.++++.| +.++....+++|-|+|.|+++.+-+||.|++++||+|++.|+++|++++ ++.|.++.+++
T Consensus 696 IlLDEATSALDT~tER~I-QaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~q 774 (790)
T KOG0056|consen 696 ILLDEATSALDTNTERAI-QAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQAQ 774 (790)
T ss_pred EEEcchhhhcCCccHHHH-HHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHHH
Confidence 999999999999999988 5677778889999999999999999999999999999999999999987 77888888654
Q ss_pred H
Q 000452 843 K 843 (1495)
Q Consensus 843 ~ 843 (1495)
.
T Consensus 775 q 775 (790)
T KOG0056|consen 775 Q 775 (790)
T ss_pred H
Confidence 3
No 97
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.3e-53 Score=584.65 Aligned_cols=475 Identities=19% Similarity=0.178 Sum_probs=363.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 365 RLEQLGIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIA 443 (1495)
Q Consensus 365 ~~~~~g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~ 443 (1495)
...+.+.+.-..+...+|++.++.+...++++++|+|+|+++.|++.+.+... .+..+....+.+++.+++++...++.
T Consensus 948 ~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l 1027 (1490)
T TIGR01271 948 PLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYI 1027 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777888888899999999999999999999999999999999997544 44555556666666666655544443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 444 SVAAFFGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYT 523 (1495)
Q Consensus 444 ~l~gl~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~ 523 (1495)
+++.+.++++++.+..+..+..+..++.....+........|.++|+.+||.|++|+.|.++..+.-+...+........
T Consensus 1028 ~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1107 (1490)
T TIGR01271 1028 FIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLST 1107 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33323333333333444444455556666777777889999999999999999999999888766544221111111111
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 000452 524 SSITSFV-FWCAPTFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQ 602 (1495)
Q Consensus 524 ~~~~~~~-~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~ 602 (1495)
..+.... ......++..+.+. .+.....+++.+-.+++++..+..++..+...+..+..+.+|++||.+|++.++..
T Consensus 1108 ~~wl~~~~~~i~~~~~~~~~~l--~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~ 1185 (1490)
T TIGR01271 1108 LRWFQMRIDIIFVFFFIAVTFI--AIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEE 1185 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 1111111 01011111111111 11112345566666666667778888888888889999999999999999765432
Q ss_pred ccccc--------------C-C-CC-CCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHH
Q 000452 603 PDLVE--------------K-Q-PR-GSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSC 665 (1495)
Q Consensus 603 ~~~~~--------------~-~-~~-~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~ 665 (1495)
+...+ . . |. -+..+.|+++|++|+|+.+ .+++|+|+||+|++||++||||++|||||||+++
T Consensus 1186 ~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~l 1264 (1490)
T TIGR01271 1186 PRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSA 1264 (1490)
T ss_pred ccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 21000 0 0 10 0123579999999999743 4689999999999999999999999999999999
Q ss_pred HhCCCCCCCcEEEEcCe-------------EEEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCC
Q 000452 666 ILGEVPKISGTLKLCGT-------------KAYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGD 732 (1495)
Q Consensus 666 llG~~~~~~G~v~~~g~-------------~ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd 732 (1495)
|+|+++ .+|+|.+||. ++||||+|.+|+|||||||....++++++..++++.|+|.+.++.+|.|.
T Consensus 1265 L~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GL 1343 (1490)
T TIGR01271 1265 LLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKL 1343 (1490)
T ss_pred HhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCcccc
Confidence 999997 8999999983 59999999999999999998766788999999999999999999999999
Q ss_pred cccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEE
Q 000452 733 QTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVL 812 (1495)
Q Consensus 733 ~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~ 812 (1495)
+|.+|++|.+||||||||++|||||+++|+|+|||||||+||+.+.+.|.+ .++...+++|||+|||+++.+..||+|+
T Consensus 1344 dt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~-~L~~~~~~~TvI~IaHRl~ti~~~DrIl 1422 (1490)
T TIGR01271 1344 DFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRK-TLKQSFSNCTVILSEHRVEALLECQQFL 1422 (1490)
T ss_pred ccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHH-HHHHHcCCCEEEEEecCHHHHHhCCEEE
Confidence 999999999999999999999999999999999999999999999888864 5666678999999999999999999999
Q ss_pred EEeCCEEEEecChHHHHhcCCchhHHHHHHHh
Q 000452 813 VIKDGKITQAGKYTDVINSGTDFMELVDAHKQ 844 (1495)
Q Consensus 813 ~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~ 844 (1495)
+|++|+|++.|+++++++.++.|.++++...+
T Consensus 1423 vL~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1423 VIEGSSVKQYDSIQKLLNETSLFKQAMSAADR 1454 (1490)
T ss_pred EEECCEEEEeCCHHHHHcCCcHHHHHHHHhCh
Confidence 99999999999999999877788888765543
No 98
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=5e-53 Score=535.22 Aligned_cols=504 Identities=15% Similarity=0.130 Sum_probs=365.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 291 LIKAMFRSVWKDVLLTALVAIVCTLATYVG-PYLIDTLVQYLSGKRDFENEGYALVSAFCVAKLVECLCQRFFVFRLEQL 369 (1495)
Q Consensus 291 l~~al~~~~~~~~~~~~~~~l~~~~~~~~~-P~ll~~li~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 369 (1495)
+++.+++.+++.++...++.++..++.++. |++.+.+++.+... ....+.+++.+++.. ++.....+...++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 75 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTS---LLVLPEFLGLLLLLM----AVTLGSQLALTTL 75 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---chHHHHHHHHHHHHH----HHHHHHHHHHHHH
Confidence 567778888888888888889888888874 77878888765321 111111111111111 1223344455667
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 370 GIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWYIHDPWLFLFEVALSFLILYKSLGIASVAAFF 449 (1495)
Q Consensus 370 g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~l~gl~ 449 (1495)
+.++...+...+|+|.++++....+++++|+++|+++.|++.+..++..+..++...+.+++++++++..-+..+++.++
T Consensus 76 ~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~ 155 (547)
T PRK10522 76 GHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAI 155 (547)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 78888889999999999999999999999999999999999999876666677788888888777777655555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc--cHHHHHHHHHH----HHHHHHHHHHHHHHH
Q 000452 450 GTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQG--WELKFLSKTID----LRKSESGWLKRCLYT 523 (1495)
Q Consensus 450 ~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~--wE~~f~~~i~~----~R~~E~~~l~~~~~~ 523 (1495)
++.+.+.+...+.++..+..++.++..+++.+.+.|.++|++++++.+ .++.+.++..+ .++...+.. ..
T Consensus 156 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 231 (547)
T PRK10522 156 WMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRAD----TF 231 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHH----HH
Confidence 555555666677788888888899999999999999999999997433 22334444333 333222211 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC---cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 000452 524 SSITSFVFWCAPTFVSVITFGTCILLKVP---LESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDE 600 (1495)
Q Consensus 524 ~~~~~~~~~~~p~~v~~~~f~~~~~~~~~---L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e 600 (1495)
....... ..++..+.++.+.+.+.. .+.+.+.....+...+..|+..+...+..+.+++.+++||.+++..++
T Consensus 232 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~ 307 (547)
T PRK10522 232 HLSAVNW----SNIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPY 307 (547)
T ss_pred HHHHHHH----HHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 1111111 111111122222222211 122222222222334668999999999999999999999999986543
Q ss_pred CCcccccCCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEc
Q 000452 601 LQPDLVEKQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLC 680 (1495)
Q Consensus 601 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~ 680 (1495)
.++.. ...+. .....++++|++|+|+. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++
T Consensus 308 ~~~~~-~~~~~-~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~ 383 (547)
T PRK10522 308 KAEFP-RPQAF-PDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLD 383 (547)
T ss_pred ccccc-ccccc-CcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEC
Confidence 22111 11111 11236999999999962 3579999999999999999999999999999999999999999999998
Q ss_pred Ce-------------EEEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHH
Q 000452 681 GT-------------KAYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQ 747 (1495)
Q Consensus 681 g~-------------~ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 747 (1495)
|. ++||+|+|.++++|++|| +...++++.+++++.+++..+++. +.|. .+|.+|||||
T Consensus 384 g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~~LSgGq 454 (547)
T PRK10522 384 GKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----ISNLKLSKGQ 454 (547)
T ss_pred CEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----CCCCCCCHHH
Confidence 84 589999999999999999 455667777888888877666542 2221 2488999999
Q ss_pred HHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCccccCCEEEEEeCCEEEEe
Q 000452 748 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPAADLVLVIKDGKITQA 822 (1495)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~ 822 (1495)
|||++||||++++|+++|||||||+||+++++.+.+.+..... +++|+|+|||+++.+..||+|++|++|++++.
T Consensus 455 ~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 455 KKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999988765543332 48999999999998889999999999999875
No 99
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-54 Score=514.37 Aligned_cols=440 Identities=24% Similarity=0.379 Sum_probs=334.8
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------- 682 (1495)
..++++|++++|+ ..++|+|+||++.+||++|++|+||+|||||+|.|.|.++|++|+|.++|+
T Consensus 7 ~ll~~~~i~K~Fg---gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~ 83 (500)
T COG1129 7 PLLELRGISKSFG---GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAA 83 (500)
T ss_pred ceeeeecceEEcC---CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhC
Confidence 3689999999996 468999999999999999999999999999999999999999999999995
Q ss_pred -EEEEccCCccc-CccHHHHHhcCCCC-------CHHHH----HHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHH
Q 000452 683 -KAYVAQSPWIQ-SGKIEDNILFGKEM-------DRERY----NAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQ 749 (1495)
Q Consensus 683 -~ayv~Q~~~l~-~~ti~enI~fg~~~-------~~~~~----~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 749 (1495)
|+.|.|+..+. +.||.|||.+|++. |..+. +++++..++. .. ......+||+||||
T Consensus 84 GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~---------~~--~~~~v~~LsiaqrQ 152 (500)
T COG1129 84 GIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLD---------ID--PDTLVGDLSIAQRQ 152 (500)
T ss_pred CcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCC---------CC--hhhhhhhCCHHHHH
Confidence 47999998875 67999999998753 32322 2233332222 11 34677899999999
Q ss_pred HHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecCh-HH
Q 000452 750 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKY-TD 827 (1495)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~-~~ 827 (1495)
-|+||||++.+++|+|||||||+|+.+..+++|+.+.....+|.++|+|||+++.+.. ||+|.||+||+.+..++. ++
T Consensus 153 ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~ 232 (500)
T COG1129 153 MVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAE 232 (500)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccC
Confidence 9999999999999999999999999999999997544444579999999999998765 999999999998864431 10
Q ss_pred HHhcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchhhhhhHHHHHh
Q 000452 828 VINSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQLVQEEERE 907 (1495)
Q Consensus 828 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 907 (1495)
+ . ..++++
T Consensus 233 ~------------------------------------------------------------~-------~~~lv~----- 240 (500)
T COG1129 233 T------------------------------------------------------------S-------EDELVR----- 240 (500)
T ss_pred C------------------------------------------------------------C-------HHHHHH-----
Confidence 0 0 000000
Q ss_pred hcCchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 000452 908 KGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILAR 987 (1495)
Q Consensus 908 ~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~ 987 (1495)
. .+
T Consensus 241 --------------~------------------------------Mv--------------------------------- 243 (500)
T COG1129 241 --------------L------------------------------MV--------------------------------- 243 (500)
T ss_pred --------------H------------------------------hh---------------------------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 988 STLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAW 1067 (1495)
Q Consensus 988 ~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 1067 (1495)
||
T Consensus 244 ------------------------------------Gr------------------------------------------ 245 (500)
T COG1129 244 ------------------------------------GR------------------------------------------ 245 (500)
T ss_pred ------------------------------------Cc------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHH
Q 000452 1068 QVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVA 1147 (1495)
Q Consensus 1068 ~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~ 1147 (1495)
++
T Consensus 246 -------------------------~~----------------------------------------------------- 247 (500)
T COG1129 246 -------------------------EL----------------------------------------------------- 247 (500)
T ss_pred -------------------------ch-----------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCC
Q 000452 1148 AAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPS 1227 (1495)
Q Consensus 1148 ~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~ 1227 (1495)
+. .| |.
T Consensus 248 ---------------------------------------------------------------------~~--~~---~~ 253 (500)
T COG1129 248 ---------------------------------------------------------------------ED--LF---PE 253 (500)
T ss_pred ---------------------------------------------------------------------hh--hc---cc
Confidence 00 00 00
Q ss_pred CCCCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEE
Q 000452 1228 EPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQIL 1307 (1495)
Q Consensus 1228 E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~ 1307 (1495)
++ ++ -+....++++|++.. ..++|+||++++||.+||.|--|||+|-|+.+|||.-++.+|+|.
T Consensus 254 -~~-------~~--~~~~~~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~ 317 (500)
T COG1129 254 -PP-------EE--GIGEPVLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEIL 317 (500)
T ss_pred -cc-------cc--CCCCcEEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEE
Confidence 00 00 011224677887642 168999999999999999999999999999999999999999999
Q ss_pred EcCEeCCCCCHH-HHhcccEEEcccCc---CC-CCcHHHhcCCC--CCCCHH-HHHHHHHHcCCcHHHHhc---cCCccc
Q 000452 1308 IDGIDISLIGLH-DLRTRLSIIPQDPV---MF-EGTVRSNVDPL--EEYTDE-QIWEALDKCQLGDEVRKK---EGKLDS 1376 (1495)
Q Consensus 1308 IDG~dI~~i~l~-~LR~~isiIpQdp~---LF-~GTIR~NLdp~--~~~sd~-ei~~aL~~~~L~~~v~~l---p~gLdt 1376 (1495)
+||.++.--+.+ ..+..|+|||-|-- +| .-+|++|+... ..++.. -+...-++.-..++++++ ....+.
T Consensus 318 l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~ 397 (500)
T COG1129 318 LDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQ 397 (500)
T ss_pred ECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccc
Confidence 999988877655 68899999998763 44 55999999532 111100 122222222233444443 223444
Q ss_pred ccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhh-ccCEEEE
Q 000452 1377 KVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVI-DSDMVLL 1454 (1495)
Q Consensus 1377 ~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~-~~DrIlV 1454 (1495)
++ .+||||.+|+++|||+|..+|+||||||||.++|..+.+.|.+.|++.. +|.+||+|+-.++.+. .||||+|
T Consensus 398 ~v----~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlV 473 (500)
T COG1129 398 PI----GTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILV 473 (500)
T ss_pred hh----hcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEE
Confidence 44 4799999999999999999999999999999999999999999999876 5799999999999987 6999999
Q ss_pred EeCcEEEEecChhH
Q 000452 1455 LSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1455 L~~G~ivE~gsp~~ 1468 (1495)
|.+|+++..=+.++
T Consensus 474 m~~Gri~~e~~~~~ 487 (500)
T COG1129 474 MREGRIVGELDREE 487 (500)
T ss_pred EECCEEEEEecccc
Confidence 99999997544443
No 100
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.8e-54 Score=496.15 Aligned_cols=238 Identities=36% Similarity=0.669 Sum_probs=229.5
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
|.|+|+|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|.|||.|+.+++.+++|+++
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999998666679999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEEcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCe
Q 000452 1326 SIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKI 1405 (1495)
Q Consensus 1326 siIpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~I 1405 (1495)
+||||+|.+|++|+++|++|+...+++++|++++.+++.+++.++|++||+.++|+|.+||+|||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998887899999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHHHh
Q 000452 1406 LMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYT 1485 (1495)
Q Consensus 1406 LiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~~~ 1485 (1495)
|||||||++||++++..+++.|++.+.+||||+||||++++..||||+||++|+++|+|+|++|+++ .+.|++++.+..
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhhcc
Confidence 9999999999999999999999998889999999999999999999999999999999999999985 589999998776
No 101
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=2.9e-50 Score=516.72 Aligned_cols=503 Identities=17% Similarity=0.150 Sum_probs=371.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 302 DVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRD--FENEGYALVSAFCVAKLVECLCQRFFVFRLEQLGIRLRAALIA 379 (1495)
Q Consensus 302 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~--~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~g~rir~~L~~ 379 (1495)
.++..+++.++.+++....|++.+.+++.+.+.+. +....+.+++.+++ .+++.....|..+++..++|..+..
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~----~~~~~~~~~~~~~~~~~~~r~~l~~ 172 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPP----ASFINSAIKYLLKELKLRFRVRLTR 172 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46677788888899999999999999998765431 10011112222222 3333333444455666666666666
Q ss_pred HHHHHHhcC----CcchhcCCCHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 000452 380 MIYNKGLKL----SSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLILYKSLGIAS-VAAFFGTVI 453 (1495)
Q Consensus 380 ~iy~K~L~l----s~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~w~~pl~i~~~~~lL~~~lG~~~-l~gl~~~i~ 453 (1495)
.++++.++. +....++ .+|++++++++|++.+.+.+. .+..+...++.++.+++.++..+++.. ++.++.+.+
T Consensus 173 ~l~~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l 251 (659)
T TIGR00954 173 YLYSKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFA 251 (659)
T ss_pred HHHHHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 666666553 2222232 579999999999999988654 455566667777778877887677643 333444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 454 FMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTSSITSFVFWC 533 (1495)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~~~~~~~~~~ 533 (1495)
.+.+...+.+...+..++..+..++-....+|.++|++.||+|+-|+...+++.+.-++-.+...+.....+....+...
T Consensus 252 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 331 (659)
T TIGR00954 252 TGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNI 331 (659)
T ss_pred HHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 55666777788888888899999999999999999999999999999988887766555555555544444433333222
Q ss_pred HH----HHHHHHHHHHHHHh--c---CCcCHHHHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 000452 534 AP----TFVSVITFGTCILL--K---VPLESGKVLS-A---IATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDE 600 (1495)
Q Consensus 534 ~p----~~v~~~~f~~~~~~--~---~~L~~~~vft-~---lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e 600 (1495)
.. ..+..+..+..++. | +.+|.+..+. + ..++..+..|+..+...+..+.++.++.+||.++++.++
T Consensus 332 i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~ 411 (659)
T TIGR00954 332 VAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLD 411 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 11222222222232 1 5688876544 2 334667789999999999999999999999999997532
Q ss_pred CCc------ccccC-----------------CCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCc
Q 000452 601 LQP------DLVEK-----------------QPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGS 657 (1495)
Q Consensus 601 ~~~------~~~~~-----------------~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~Gs 657 (1495)
..+ ..... .........++++|++|+|+. ++++|+|+||++++||+++|+|||||
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl~i~~Ge~~~IvG~nGs 489 (659)
T TIGR00954 412 DVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSFEVPSGNHLLICGPNGC 489 (659)
T ss_pred HHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceEEECCCCEEEEECCCCC
Confidence 100 00000 000012246999999999952 34799999999999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCcEEEEcC--eEEEEccCCcccCccHHHHHhcCC--------CCCHHHHHHHHHHhCcHHHHhh
Q 000452 658 GKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQSGKIEDNILFGK--------EMDRERYNAVLDACSLEKDLEI 727 (1495)
Q Consensus 658 GKSTLl~~llG~~~~~~G~v~~~g--~~ayv~Q~~~l~~~ti~enI~fg~--------~~~~~~~~~vl~~~~l~~dl~~ 727 (1495)
|||||+++|+|+++|++|+|.+++ .++||||+|+++++|++|||.++. ..++++.+++++.+++++.++.
T Consensus 490 GKSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~ 569 (659)
T TIGR00954 490 GKSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER 569 (659)
T ss_pred CHHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh
Confidence 999999999999999999999875 589999999999999999999874 2456778889999999887776
Q ss_pred cCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc
Q 000452 728 LSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA 807 (1495)
Q Consensus 728 l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~ 807 (1495)
|.|.+|..+ .+.+||||||||++||||++++|+++|||||||+||+.+.+.+.+. +.. .++|+|+|||+++.+..
T Consensus 570 -~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~-l~~--~~~tvI~isH~~~~~~~ 644 (659)
T TIGR00954 570 -EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRL-CRE--FGITLFSVSHRKSLWKY 644 (659)
T ss_pred -cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHH--cCCEEEEEeCchHHHHh
Confidence 889899876 5789999999999999999999999999999999999998888754 333 38999999999999988
Q ss_pred CCEEEEEeC
Q 000452 808 ADLVLVIKD 816 (1495)
Q Consensus 808 ~d~i~~l~~ 816 (1495)
||++++|++
T Consensus 645 ~d~il~l~~ 653 (659)
T TIGR00954 645 HEYLLYMDG 653 (659)
T ss_pred CCEEEEEeC
Confidence 999999973
No 102
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.9e-52 Score=484.49 Aligned_cols=440 Identities=23% Similarity=0.374 Sum_probs=345.4
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------- 682 (1495)
..++++++++.|+ ...+++||||+|++||+.|++|+||+|||||+++|.|.++|++|+|.++|+
T Consensus 3 ~~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~ 79 (501)
T COG3845 3 PALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRL 79 (501)
T ss_pred ceEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHc
Confidence 4689999999996 467899999999999999999999999999999999999999999999995
Q ss_pred -EEEEccCCccc-CccHHHHHhcCCCC------C----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHH
Q 000452 683 -KAYVAQSPWIQ-SGKIEDNILFGKEM------D----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQR 750 (1495)
Q Consensus 683 -~ayv~Q~~~l~-~~ti~enI~fg~~~------~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 750 (1495)
||.|.|++.+. +-|+.|||..|.+- + +++.++..+.++++-|.+ ++..+||=|||||
T Consensus 80 GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~-----------~~V~dLsVG~qQR 148 (501)
T COG3845 80 GIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPD-----------AKVADLSVGEQQR 148 (501)
T ss_pred CCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCcc-----------ceeecCCcchhHH
Confidence 58999999886 56999999999753 2 345556666666655443 6788999999999
Q ss_pred HHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHH
Q 000452 751 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVI 829 (1495)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 829 (1495)
|.|-+|||++|+++|||||||.|-|...+++|+.+-.....|+|||+|||.++.+.. ||++-||++|+++.. ++..
T Consensus 149 VEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt--~~~~- 225 (501)
T COG3845 149 VEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGT--VDPV- 225 (501)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEee--ecCC-
Confidence 999999999999999999999999999999997554445579999999999999766 999999999997632 2100
Q ss_pred hcCCchhHHHHHHHhhhcccccccCCCCCCCCCCCCCCCCCCcccccccccccccccccccccccchhhhhhHHHHHhhc
Q 000452 830 NSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQLVQEEEREKG 909 (1495)
Q Consensus 830 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g 909 (1495)
.+ . . .+|-.
T Consensus 226 -----------------------------------~~----------------~------t-----------~~ela--- 234 (501)
T COG3845 226 -----------------------------------AE----------------T------T-----------EEELA--- 234 (501)
T ss_pred -----------------------------------CC----------------C------C-----------HHHHH---
Confidence 00 0 0 00000
Q ss_pred CchHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcccCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Q 000452 910 KVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARST 989 (1495)
Q Consensus 910 ~v~~~~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~ 989 (1495)
. ++ .
T Consensus 235 -----------~----------lM--------------------v----------------------------------- 238 (501)
T COG3845 235 -----------E----------LM--------------------V----------------------------------- 238 (501)
T ss_pred -----------H----------Hh--------------------c-----------------------------------
Confidence 0 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 990 LLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQV 1069 (1495)
Q Consensus 990 ~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1495)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T COG3845 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHH
Q 000452 1070 FIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAA 1149 (1495)
Q Consensus 1070 ~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~ 1149 (1495)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T COG3845 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCC
Q 000452 1150 MEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEP 1229 (1495)
Q Consensus 1150 ~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~~~E~ 1229 (1495)
...+. .+.+
T Consensus 239 ---------------------------G~~v~-------------------------------------------~~~~- 247 (501)
T COG3845 239 ---------------------------GREVV-------------------------------------------LRVV- 247 (501)
T ss_pred ---------------------------CCccc-------------------------------------------cccc-
Confidence 00000 0000
Q ss_pred CCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEc
Q 000452 1230 PLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILID 1309 (1495)
Q Consensus 1230 ~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~ID 1309 (1495)
. ++.-|..--++++|+++.-+.+ -..+++|||++++||.+||.|-.|.|-|.|+.+|.|+..|.+|+|.++
T Consensus 248 -------~-~~~~pg~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~ 318 (501)
T COG3845 248 -------K-PPSTPGEVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLN 318 (501)
T ss_pred -------c-CCCCCCCeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEEC
Confidence 0 1111233468999999875443 358999999999999999999999999999999999999999999999
Q ss_pred CEeC-CCCCHHHHh-cccEEEcccCc----CCCCcHHHhcCCCCC----------CCHHHHHHHHHHcCCcHHHHh---c
Q 000452 1310 GIDI-SLIGLHDLR-TRLSIIPQDPV----MFEGTVRSNVDPLEE----------YTDEQIWEALDKCQLGDEVRK---K 1370 (1495)
Q Consensus 1310 G~dI-~~i~l~~LR-~~isiIpQdp~----LF~GTIR~NLdp~~~----------~sd~ei~~aL~~~~L~~~v~~---l 1370 (1495)
|.|+ ...+....| ..+++||.|.. ..+-|+.+|+-+... .+-.++.+..++ .+++ .
T Consensus 319 G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~-----li~~fdVr 393 (501)
T COG3845 319 GKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARE-----LIEEFDVR 393 (501)
T ss_pred CEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHHH-----HHHHcCcc
Confidence 9997 677777765 46999999984 566799999853221 122333332221 1221 1
Q ss_pred cCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-
Q 000452 1371 EGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID- 1448 (1495)
Q Consensus 1371 p~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~- 1448 (1495)
+.+.++++ .+||||+.|++-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. +|+.|++|+-.|+.+..
T Consensus 394 ~~~~~~~a----~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~l 469 (501)
T COG3845 394 APSPDAPA----RSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILEL 469 (501)
T ss_pred CCCCCcch----hhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHh
Confidence 33444444 4799999999999999999999999999999999999999999988765 68999999999999865
Q ss_pred cCEEEEEeCcEEEEecChhH
Q 000452 1449 SDMVLLLSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1449 ~DrIlVL~~G~ivE~gsp~~ 1468 (1495)
||||.||.+|+++....|++
T Consensus 470 sDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 470 SDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred hheeeeeeCCceeccccccc
Confidence 99999999999999888776
No 103
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.7e-49 Score=443.57 Aligned_cols=464 Identities=22% Similarity=0.294 Sum_probs=357.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 370 GIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWYI-HDPWLFLFEVALSFLILYKSLGIASVAAF 448 (1495)
Q Consensus 370 g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~-~~~w~~pl~i~~~~~lL~~~lG~~~l~gl 448 (1495)
+....-.+....|.+.+.|+.....+..+|.+---+.--..-|+...+++ ..+....+++.+..+++++..||......
T Consensus 10 ~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~t 89 (497)
T COG5265 10 GQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALTT 89 (497)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHHH
Confidence 33444456667788999998877777777766554544455566555443 44556678999999999999997654444
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHhccHHHHHHHHHHH----HHHHHHHHHHHHH
Q 000452 449 F-GTVIFMLVNVPLSTVQEKFQNELMKSKDER-MKATSEILRNMRILKLQGWELKFLSKTIDL----RKSESGWLKRCLY 522 (1495)
Q Consensus 449 ~-~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R-~~~~~E~L~~ir~IK~~~wE~~f~~~i~~~----R~~E~~~l~~~~~ 522 (1495)
+ .+++...+.+........++++ |...|.. -..-.+.|-|..++|.|+-|+.+..+-.+. ++.+++......+
T Consensus 90 ~vtv~lY~~ftv~~s~wr~~~rr~-~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~ 168 (497)
T COG5265 90 LVTVILYLLFTVIVSDWRTDFRRL-MNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLV 168 (497)
T ss_pred HHHHHHHHHhheeehhhhHHHHHh-hhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHH
Confidence 4 4444444444444444444444 4444444 455668899999999999998877665443 3333332222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 000452 523 TSSITSFVFWCAPTFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQ 602 (1495)
Q Consensus 523 ~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~ 602 (1495)
+......++.. .+....+.+..-+..+.+|.|...-.-++...+..|++.+......+-|+++..+++.+.+..+-..
T Consensus 169 Ln~gQ~~I~~~--~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v 246 (497)
T COG5265 169 LNFGQTAIFST--GLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEV 246 (497)
T ss_pred HHHhhHHHHHH--HHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhh
Confidence 22111111111 1122223334445577899999999999999999999999999999999999999998887654332
Q ss_pred cccccCCCCC-CCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC
Q 000452 603 PDLVEKQPRG-SSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG 681 (1495)
Q Consensus 603 ~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g 681 (1495)
.+...-.+-. ...+.+.+++++|.|++ .+|+|+++||++++|+.++++|++|+||||+++.|.+.+++.+|.|.++|
T Consensus 247 ~d~pda~~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~ 324 (497)
T COG5265 247 SDAPDAPPLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDG 324 (497)
T ss_pred ccCCCCccccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcc
Confidence 2221111111 23457999999999974 57999999999999999999999999999999999999999999999999
Q ss_pred e-------------EEEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHH
Q 000452 682 T-------------KAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQ 747 (1495)
Q Consensus 682 ~-------------~ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 747 (1495)
+ +|.|||+..+||.|+..||.+|++ ..++...++.++.++.+.++.+|+|.+|.+||+|-.||||+
T Consensus 325 qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSgge 404 (497)
T COG5265 325 QDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGE 404 (497)
T ss_pred hhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCch
Confidence 5 599999999999999999999987 45667778899999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHH
Q 000452 748 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~ 827 (1495)
||||++||++..+|+|++|||.|||||.||++.|- ..++...+|+|-+++.|+++.+-.||.|+||+||+|+|.|++++
T Consensus 405 kqrvaiar~ilk~p~il~~deatsaldt~te~~iq-~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~ 483 (497)
T COG5265 405 KQRVAIARTILKNPPILILDEATSALDTHTEQAIQ-AALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEE 483 (497)
T ss_pred HHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHH-HHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHH
Confidence 99999999999999999999999999999998885 45666778999999999999999999999999999999999999
Q ss_pred HHhcCCchhHHH
Q 000452 828 VINSGTDFMELV 839 (1495)
Q Consensus 828 l~~~~~~~~~l~ 839 (1495)
+++.++.|.+++
T Consensus 484 ll~~~g~ya~mw 495 (497)
T COG5265 484 LLAAGGLYAEMW 495 (497)
T ss_pred HHHcCChHHHHh
Confidence 999988887764
No 104
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-50 Score=476.09 Aligned_cols=257 Identities=23% Similarity=0.429 Sum_probs=222.4
Q ss_pred HHhhHHHHHHHHhcCCCCCCCccc------cCCC---CCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEE
Q 000452 1211 NKIISVERIFQYTCIPSEPPLEIE------ESRP---NHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIV 1281 (1495)
Q Consensus 1211 ~~~~sveRi~~~~~~~~E~~~~~~------~~~~---~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIV 1281 (1495)
..+.+++|+.+|...+.|.....+ +..+ +..||..|.|+|+|++++|+++.+++|+|+||+|++||++||+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~Iv 114 (329)
T PRK14257 35 QKLNKYQRAFAWLKLPKQKKAELKQFLNKKKTQVDLLKEDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFI 114 (329)
T ss_pred hccccccchhhHHhcccccchhhhhcccccccccccccCCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEE
Confidence 446777888888776655432111 1111 3469999999999999999865567999999999999999999
Q ss_pred cCCCCCHHHHHHHHhcccc-----CCccEEEEcCEeCC--CCCHHHHhcccEEEcccCcCCCCcHHHhcC--C-CCCCCH
Q 000452 1282 GRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDIS--LIGLHDLRTRLSIIPQDPVMFEGTVRSNVD--P-LEEYTD 1351 (1495)
Q Consensus 1282 GrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~--~i~l~~LR~~isiIpQdp~LF~GTIR~NLd--p-~~~~sd 1351 (1495)
||||||||||+++|+|+++ |.+|+|.|||+|+. ++++.++|++++||||+|++|++||++||+ | +..+++
T Consensus 115 G~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~ 194 (329)
T PRK14257 115 GPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGIND 194 (329)
T ss_pred CCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCCh
Confidence 9999999999999999997 57999999999997 566788999999999999999999999998 3 234555
Q ss_pred HHH-----HHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHH
Q 000452 1352 EQI-----WEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQS 1426 (1495)
Q Consensus 1352 ~ei-----~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~ 1426 (1495)
++. .++++.+++.+ ++++.+++.|.+||||||||+|||||++++|+||||||||++||+++...+++.
T Consensus 195 ~~~~~~~~~~~l~~~~L~~-------~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~ 267 (329)
T PRK14257 195 RKILEKIVEKSLKSAALWD-------EVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEEL 267 (329)
T ss_pred HHHHHHHHHHHHHHcCCcc-------hhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 554 55678887653 456788999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCC
Q 000452 1427 LRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKS 1474 (1495)
Q Consensus 1427 Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~ 1474 (1495)
|++.++++|+|+||||++++.+ ||||+||++|+|+|.|+|++++.++.
T Consensus 268 i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~~~ 316 (329)
T PRK14257 268 ILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIHPK 316 (329)
T ss_pred HHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCC
Confidence 9999999999999999999998 99999999999999999999997654
No 105
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.1e-45 Score=429.73 Aligned_cols=194 Identities=19% Similarity=0.356 Sum_probs=163.3
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|.++||+|+|.++. ..+++++|-|.++++|++|||+|+|||||++++.+.+.|+.|.|.-.- ..+++
T Consensus 389 vi~~~nv~F~y~~~~-~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~-----------H~~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP-MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHS-----------HNKLP 456 (614)
T ss_pred eEEEeccccCCCCcc-hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccc-----------cccch
Confidence 599999999998764 799999999999999999999999999999999999999999886432 22344
Q ss_pred EEccc---CcCCCCcHHHhcCC-CC-CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 000452 1327 IIPQD---PVMFEGTVRSNVDP-LE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1401 (1495)
Q Consensus 1327 iIpQd---p~LF~GTIR~NLdp-~~-~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1401 (1495)
+--|. -.-.+-|.-+|+.| +. +-..+++...|.++||....+.. ++ ++||+|||.||++||++++
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~------p~----~~LS~Gqr~rVlFa~l~~k 526 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVV------PM----SQLSDGQRRRVLFARLAVK 526 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCcccccc------ch----hhcccccchhHHHHHHHhc
Confidence 44443 34566677777754 33 35667888999999997544333 33 4799999999999999999
Q ss_pred CCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEec
Q 000452 1402 RRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1402 ~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1464 (1495)
+|.||+|||||++||.+|-..+.++|.+. +.+||+|+|+...|.. +++|++.++|.+..++
T Consensus 527 qP~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~ 588 (614)
T KOG0927|consen 527 QPHLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWD 588 (614)
T ss_pred CCcEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeecC
Confidence 99999999999999999999999999876 6799999999999987 8999999999987764
No 106
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.1e-44 Score=415.89 Aligned_cols=240 Identities=48% Similarity=0.807 Sum_probs=224.9
Q ss_pred CcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhc
Q 000452 1244 SHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRT 1323 (1495)
Q Consensus 1244 ~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~ 1323 (1495)
..|.|+++|++++|+.....+|+|+||+|+|||++||+|++|||||||+++|+|+++|++|+|.+||.++.+.+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 35789999999999754356999999999999999999999999999999999999999999999999999999889999
Q ss_pred ccEEEcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 000452 1324 RLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRR 1403 (1495)
Q Consensus 1324 ~isiIpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1403 (1495)
+++|+||+|.+|++|+++|+++.....+++++++++.+++.+.+..+|.|+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876555677889999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHHH
Q 000452 1404 KILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAE 1483 (1495)
Q Consensus 1404 ~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~~ 1483 (1495)
++|||||||++||+++...+.+.|++..+++|+|+++|+++.+..||||++|++|++++.|+++++.+.+++.|+.++.+
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 255 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVRT 255 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHhc
Confidence 99999999999999999999999998777899999999999999999999999999999999999998777888887653
No 107
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-45 Score=403.89 Aligned_cols=227 Identities=28% Similarity=0.438 Sum_probs=198.1
Q ss_pred EEEeeeeEEeCCC---CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCC---HHHH
Q 000452 1248 IDLRDLQVRYAPH---MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG---LHDL 1321 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~---~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~---l~~L 1321 (1495)
|+++||+..|... ...+|+||||+|++||..||+|+||||||||++++-+|-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999863 357999999999999999999999999999999999999999999999998888776 5667
Q ss_pred hcccEEEcccCcCCC-CcHHHhcC-CCC--CCCHH----HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 000452 1322 RTRLSIIPQDPVMFE-GTVRSNVD-PLE--EYTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1393 (1495)
Q Consensus 1322 R~~isiIpQdp~LF~-GTIR~NLd-p~~--~~sd~----ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl 1393 (1495)
|++||+|+|++-|++ -||.+|+. |+. ..+.+ ++.+.|+.+||.|.-..-| .+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 899999999999998 69999996 543 34444 4677888999887765554 57899999999
Q ss_pred HHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1394 CLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1394 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
+|||||..+|+||+.|||||+|||+|.+.|.+.|++.- -|-|+++|||.++.|++ ||||.||++|+|+|.|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999888887643 37899999999999987 9999999999999999999999
Q ss_pred hcCC-ChHHHHHHHHh
Q 000452 1471 ENKS-SSFSQLVAEYT 1485 (1495)
Q Consensus 1471 ~~~~-s~f~~lv~~~~ 1485 (1495)
.++. ..=++++.+..
T Consensus 231 ~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 231 ANPKHAITQEFIGETL 246 (339)
T ss_pred cCcchHHHHHHHHhhc
Confidence 8874 34455655443
No 108
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.2e-45 Score=382.28 Aligned_cols=216 Identities=29% Similarity=0.465 Sum_probs=193.8
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCC-CCCHHHHhccc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDIS-LIGLHDLRTRL 1325 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~-~i~l~~LR~~i 1325 (1495)
-|+++||+.+|... .||+|||++|++||.+.|+||||||||||+++|.+|.+|++|+|.|||.++. ..++..+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 48999999999854 4999999999999999999999999999999999999999999999998774 33789999999
Q ss_pred EEEcccCcCCCC-cHHHhcC--CC--CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1326 SIIPQDPVMFEG-TVRSNVD--PL--EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLd--p~--~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
|+|+|+..||+- |+-+|+. |- ...+ .+.-.+.|+++||.|.....|. .|||||+||++||
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQRVAIA 148 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPA-----------QLSGGQQQRVAIA 148 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----------ccCcHHHHHHHHH
Confidence 999999999977 9999985 31 1222 2335667999999998887775 5799999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCC
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKS 1474 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~ 1474 (1495)
|||.-+|+|+++|||||+|||+.-..+.+++++.. .+-|.|+|||.+....+ +|||+.||+|+|+|.|+|+++..++.
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~ 228 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPK 228 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCC
Confidence 99999999999999999999999999999999876 46899999999999988 99999999999999999999998865
Q ss_pred C
Q 000452 1475 S 1475 (1495)
Q Consensus 1475 s 1475 (1495)
.
T Consensus 229 ~ 229 (240)
T COG1126 229 S 229 (240)
T ss_pred C
Confidence 3
No 109
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-44 Score=424.85 Aligned_cols=264 Identities=24% Similarity=0.320 Sum_probs=222.8
Q ss_pred cCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCCCcccEEEEeeEEEecC
Q 000452 550 KVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQPDLVEKQPRGSSETAIEIADGNFSWDI 629 (1495)
Q Consensus 550 ~~~L~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 629 (1495)
.+++++.++|+.++.|+.+..|+..+|..... .+|++.|+..+|.+....... ......|+++|++++|..
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~nls~~y~~ 92 (329)
T PRK14257 22 LNELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKED--FNHANVFEIRNFNFWYMN 92 (329)
T ss_pred cchhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccCC--CCcCceEEEEeeEEEecC
Confidence 35689999999999999999999988876443 569999988776543211111 123357999999999963
Q ss_pred CCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCC-----CCCcEEEEcC---------------eEEEEccC
Q 000452 630 SSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG---------------TKAYVAQS 689 (1495)
Q Consensus 630 ~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~-----~~~G~v~~~g---------------~~ayv~Q~ 689 (1495)
..+++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++| .++||||+
T Consensus 93 -~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~ 171 (329)
T PRK14257 93 -RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQK 171 (329)
T ss_pred -CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecC
Confidence 23579999999999999999999999999999999999996 5799998765 36899999
Q ss_pred CcccCccHHHHHhcCCCC---C-HH----HHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCC
Q 000452 690 PWIQSGKIEDNILFGKEM---D-RE----RYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDA 761 (1495)
Q Consensus 690 ~~l~~~ti~enI~fg~~~---~-~~----~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 761 (1495)
||++++|++|||.|+..+ + ++ .++++++.|+|.++++ +.+++++.+|||||||||+||||++++|
T Consensus 172 ~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~-------~~~~~~~~~LSgGqkqRl~LARAl~~~p 244 (329)
T PRK14257 172 PTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVK-------DDLDKAGNALSGGQQQRLCIARAIALEP 244 (329)
T ss_pred CccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhh-------hhhhCCcccCCHHHHHHHHHHHHHHhCC
Confidence 999999999999987532 1 22 3677788888765553 5688999999999999999999999999
Q ss_pred CEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 762 DIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 762 ~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
+|+||||||+|||+++.+++ .+++....+++|+|+|||+++++.. ||+|++|++|+|++.|+++++...
T Consensus 245 ~IlLLDEPts~LD~~~~~~i-~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~ 314 (329)
T PRK14257 245 EVLLMDEPTSALDPIATAKI-EELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIH 314 (329)
T ss_pred CEEEEeCCcccCCHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999998885 5677777778999999999999887 999999999999999999998754
No 110
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-44 Score=376.71 Aligned_cols=202 Identities=31% Similarity=0.433 Sum_probs=176.9
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------- 682 (1495)
.|+++|++++|. +..+|+|||++|++||+++|||||||||||||+||.|+.+|++|+|.++|.
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 489999999996 457999999999999999999999999999999999999999999999993
Q ss_pred EEEEccCCcccC-ccHHHHHhcCCC----CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 KAYVAQSPWIQS-GKIEDNILFGKE----MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 ~ayv~Q~~~l~~-~ti~enI~fg~~----~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
+|+|+|+..+|+ .|+.|||..+.- .. +++..+.++..+|.+..+ ..+.+|||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~-----------~yP~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKAD-----------AYPAQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhh-----------hCccccCcHHHHHHHH
Confidence 479999999885 699999998741 22 244556677777766555 4558999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhcC
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
||||..+|+++|+|||||||||+...++.+-.......|.|.|+|||++.|... ||||+.|++|+|+++|+++++..+.
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999999886544445579999999999999987 9999999999999999999998654
No 111
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.6e-43 Score=401.71 Aligned_cols=234 Identities=32% Similarity=0.518 Sum_probs=216.3
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+.+..++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.|+...+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999998888889999999
Q ss_pred EcccCcCCCCcHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeE
Q 000452 1328 IPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKIL 1406 (1495)
Q Consensus 1328 IpQdp~LF~GTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~IL 1406 (1495)
+||+|.+|+.|+++||.... ..+.+++.++++..++.+.+..+|.|+++.....+.+||||||||++||||++++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999999999997533 35567788889999999999999999999988999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHH
Q 000452 1407 MLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVA 1482 (1495)
Q Consensus 1407 iLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~ 1482 (1495)
||||||++||+.+...+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|++++++++ .+.|+.++.
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 235 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQ 235 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHh
Confidence 999999999999999999999998778999999999999988999999999999999999999975 577777654
No 112
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.4e-43 Score=396.17 Aligned_cols=221 Identities=58% Similarity=0.995 Sum_probs=210.1
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
|.|+++|++++|+....++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 56999999999975445699999999999999999999999999999999999999999999999999998988999999
Q ss_pred EEEcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCe
Q 000452 1326 SIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKI 1405 (1495)
Q Consensus 1326 siIpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~I 1405 (1495)
+|+||+|.+|++|+++|++++...+++++.++++..++.+.+..+|.|+++...+.+.+||+|||||++|||||+++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998777788899999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecCh
Q 000452 1406 LMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSP 1466 (1495)
Q Consensus 1406 LiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp 1466 (1495)
|+|||||++||+.+...+.+.|++..++.|||+++|+++.+..||+|++|++|++++.|++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999988778999999999999999999999999999998864
No 113
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-44 Score=372.23 Aligned_cols=220 Identities=28% Similarity=0.468 Sum_probs=198.6
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCc-----cEEEEcCEeCCC--CCH
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAA-----GQILIDGIDISL--IGL 1318 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~-----G~I~IDG~dI~~--i~l 1318 (1495)
..++++|+++.|... .+|+|||++|++++.+|++|||||||||++++|-|+.+..+ |+|.+||.||-+ ++.
T Consensus 6 ~~~~~~~l~~yYg~~--~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGDK--HALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECch--hhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 368999999999754 59999999999999999999999999999999999999875 999999999986 578
Q ss_pred HHHhcccEEEcccCcCCCCcHHHhcCCCC-------CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1319 HDLRTRLSIIPQDPVMFEGTVRSNVDPLE-------EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1319 ~~LR~~isiIpQdp~LF~GTIR~NLdp~~-------~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
-+||+++|+|.|.|.-|+.||+||+.... ..-||-+.++|+++.|||.|... | .+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDr---L----~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDR---L----HKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHH---h----hCCccCCChhHHH
Confidence 99999999999999999999999996431 12245578899999999998753 3 3567789999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
||||||||.-+|+||+||||||+||+.+...|.+.|.+..++-|||+|||.+.... -+|+...+..|+++|+|..+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 99999999999999999999999999999999999999999999999999998765 49999999999999999999999
Q ss_pred hcCC
Q 000452 1471 ENKS 1474 (1495)
Q Consensus 1471 ~~~~ 1474 (1495)
.++.
T Consensus 237 ~~P~ 240 (253)
T COG1117 237 TNPK 240 (253)
T ss_pred cCcc
Confidence 8763
No 114
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-43 Score=375.39 Aligned_cols=218 Identities=28% Similarity=0.444 Sum_probs=195.7
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+|+||+++|.+ ..+++|+||+|++||.+.++|+|||||||+++++.|+++|++|+|+|||.||++++..+||++|||
T Consensus 2 I~~~nvsk~y~~--~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGN--KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCC--ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 799999999984 459999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcccCcCCCC-cHHHhcC--CC-CCCC----HHHHHHHHHHcCCcH--HHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1328 IPQDPVMFEG-TVRSNVD--PL-EEYT----DEQIWEALDKCQLGD--EVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLd--p~-~~~s----d~ei~~aL~~~~L~~--~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
|-|.--||+. ||.+||. |. ...+ ++++.+.|+.++|.+ +..+.|. .|||||+||+.+||
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~-----------eLSGGQQQRVGv~R 148 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPH-----------ELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCch-----------hcCcchhhHHHHHH
Confidence 9999999976 9999996 31 2333 455778899999964 6655554 68999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchh-hhccCEEEEEeCcEEEEecChhHHhhcCC
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITS-VIDSDMVLLLSHGLIEEYDSPRKLLENKS 1474 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~t-i~~~DrIlVL~~G~ivE~gsp~~Ll~~~~ 1474 (1495)
||..+|+||+||||.++||+-|...+|+-+.+..+ ++|+|+|||+++. ++-+|||.||++|+|+.+|+|+++++++.
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pa 228 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPA 228 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCcc
Confidence 99999999999999999999999999998876543 7999999999976 56799999999999999999999999887
Q ss_pred ChHH
Q 000452 1475 SSFS 1478 (1495)
Q Consensus 1475 s~f~ 1478 (1495)
..|-
T Consensus 229 n~FV 232 (309)
T COG1125 229 NDFV 232 (309)
T ss_pred HHHH
Confidence 6553
No 115
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.3e-42 Score=398.74 Aligned_cols=194 Identities=22% Similarity=0.313 Sum_probs=167.9
Q ss_pred CcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhc
Q 000452 1244 SHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRT 1323 (1495)
Q Consensus 1244 ~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~ 1323 (1495)
++..+++.+|+|.|.|+.++.++++++.+..-+++++||++|+||||+++++.+-.+|..|.+.+.+ |.
T Consensus 359 ~~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ 427 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RL 427 (582)
T ss_pred CCCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cc
Confidence 3457999999999999987899999999999999999999999999999999999999999998876 78
Q ss_pred ccEEEcccCcCCCCcHHHhc---C----CCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1324 RLSIIPQDPVMFEGTVRSNV---D----PLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1324 ~isiIpQdp~LF~GTIR~NL---d----p~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
+|+|-.|.-+=| ..-|. | -+..-+++|+.+.|...|+...+...+ -..||||||=||++|
T Consensus 428 ri~~f~Qhhvd~---l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~s----------i~~LSGGQKsrvafA 494 (582)
T KOG0062|consen 428 RIKYFAQHHVDF---LDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQS----------IASLSGGQKSRVAFA 494 (582)
T ss_pred eecchhHhhhhH---HHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhcc----------ccccCCcchhHHHHH
Confidence 999999987644 22332 2 122338999999999998876554332 145999999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEe
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEY 1463 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1463 (1495)
-....+|.+|||||||..||.++-..+-++|+.. +.-||+|+|+.+.|.. |+-++|.++|+|.-+
T Consensus 495 ~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F--~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~i 560 (582)
T KOG0062|consen 495 ACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF--NGGVVLVSHDEEFISSLCKELWVVEDGKVTPI 560 (582)
T ss_pred HHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc--CCcEEEEECcHHHHhhcCceeEEEcCCcEEee
Confidence 9999999999999999999999999999999875 4579999999999976 999999999999863
No 116
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-42 Score=388.99 Aligned_cols=232 Identities=33% Similarity=0.524 Sum_probs=213.1
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+....++|+|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999997543459999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeE
Q 000452 1328 IPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKIL 1406 (1495)
Q Consensus 1328 IpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~IL 1406 (1495)
+||+|.+|+.|+++|+... ..++.+++.+.++.+++.+.+..+|.|+++.......+||+|||||++|||||+++|+++
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999754 345667788888999999999999999999998899999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHH
Q 000452 1407 MLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQL 1480 (1495)
Q Consensus 1407 iLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~l 1480 (1495)
||||||++||+.+...+.+.|++..++.|+|+++|+++.+..||+|++|++|++++.|+++++.++ .+.|+.+
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~ 233 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYAKL 233 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchhhh
Confidence 999999999999999999999998788999999999999999999999999999999999999865 4555543
No 117
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.6e-42 Score=381.67 Aligned_cols=207 Identities=57% Similarity=0.984 Sum_probs=190.2
Q ss_pred CCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHH
Q 000452 1242 WPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL 1321 (1495)
Q Consensus 1242 wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L 1321 (1495)
||..+.++++|++++|+....++|+|+||+|++||.+||+|++|||||||+++|+|+++|.+|+|.+||.++.+.+..++
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 89999999999999997543469999999999999999999999999999999999999999999999999998888889
Q ss_pred hcccEEEcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 000452 1322 RTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1401 (1495)
Q Consensus 1322 R~~isiIpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1401 (1495)
|++++|+||+|.+|++|+++|+..+..++++++.++++ +.+....||+|||||++||||+++
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999998665566666666554 234567899999999999999999
Q ss_pred CCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecCh
Q 000452 1402 RRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSP 1466 (1495)
Q Consensus 1402 ~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp 1466 (1495)
+|+||||||||++||+++...+.+.|++..+++|+|+|+|+++.+..||+|++|++|++++.|+|
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999998778999999999999988999999999999999875
No 118
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-41 Score=386.30 Aligned_cols=233 Identities=36% Similarity=0.588 Sum_probs=214.9
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+.+ ..+|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.+++..+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 5789999999643 359999999999999999999999999999999999999999999999999999888889999999
Q ss_pred EcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeE
Q 000452 1328 IPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKIL 1406 (1495)
Q Consensus 1328 IpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~IL 1406 (1495)
+||+|.+|++|+++|+... ...+++++.++++.+++.+.+..+|.|+++.+.....+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999743 345677888999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHHH
Q 000452 1407 MLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVA 1482 (1495)
Q Consensus 1407 iLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv~ 1482 (1495)
||||||++||+++...+.+.|++..++.|||+++|+++.+..||++++|++|++++.|+++++.++ .+.|+.++.
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~ 234 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWK 234 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHh
Confidence 999999999999999999999987668899999999999999999999999999999999999864 566766654
No 119
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-42 Score=385.39 Aligned_cols=226 Identities=38% Similarity=0.598 Sum_probs=210.4
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
|.|+++|++++|... .++++|+||+|++||++||+|++|||||||+++|.|+++|.+|+|.+||.++.+.+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 469999999999643 3599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcccCcCCCCcHHHhcCCCC-CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 000452 1326 SIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRK 1404 (1495)
Q Consensus 1326 siIpQdp~LF~GTIR~NLdp~~-~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ 1404 (1495)
+|+||+|.+|++|+++|+.... ...++++.++++.+++.+.+..+|.|+++.+.....+||+|||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999997543 456678889999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1405 ILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1405 ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
+|||||||++||+.+.+.+.+.|++..+++|||+|+|+++.+..||+|++|++|++++.|++++++++
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 99999999999999999999999987678999999999999988999999999999999999888754
No 120
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.2e-41 Score=401.65 Aligned_cols=224 Identities=27% Similarity=0.436 Sum_probs=194.1
Q ss_pred EEEeeeeEEeCCC--CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHH---Hh
Q 000452 1248 IDLRDLQVRYAPH--MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---LR 1322 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~--~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR 1322 (1495)
|+++||+++|+.+ ..++|+||||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+.+++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cccEEEcccCcCCC-CcHHHhcC-CC--CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 000452 1323 TRLSIIPQDPVMFE-GTVRSNVD-PL--EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1323 ~~isiIpQdp~LF~-GTIR~NLd-p~--~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
++|++|||++.+|. .|+++|+. |. ...+ ++++.++++.+++.+...+.| ..||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----------SNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999995 69999996 22 1223 345778899999987655443 478999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
|||||+.+|+||+||||||+||++|...|.+.|++..+ +.|||+|||+++.+.. ||+|++|++|+|+|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998753 7899999999999966 99999999999999999999987
Q ss_pred cCCChH-HHHHH
Q 000452 1472 NKSSSF-SQLVA 1482 (1495)
Q Consensus 1472 ~~~s~f-~~lv~ 1482 (1495)
++...+ ++++.
T Consensus 231 ~p~~~~~~~~~~ 242 (343)
T TIGR02314 231 HPKTPLAQKFIR 242 (343)
T ss_pred CCCcHHHHHHHh
Confidence 654433 44443
No 121
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.6e-41 Score=384.00 Aligned_cols=233 Identities=34% Similarity=0.609 Sum_probs=211.9
Q ss_pred EEEeeeeEEeCCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1248 IDLRDLQVRYAPH-MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~-~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
|+++|++++|+.. ..++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+....|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 5789999999653 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCe
Q 000452 1327 IIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKI 1405 (1495)
Q Consensus 1327 iIpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~I 1405 (1495)
|+||+|.+|+.|+++|+... .....+++.+.++.+++.+.+..+|.|+++.......+||+|||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999753 34456778888999999999999999999999988999999999999999999999999
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHHH
Q 000452 1406 LMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLV 1481 (1495)
Q Consensus 1406 LiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~lv 1481 (1495)
|||||||++||+.+...+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|+++++.+. .+..++++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KGVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-ChhHHHHh
Confidence 9999999999999999999999987678999999999999989999999999999999999998864 44555443
No 122
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=3.7e-41 Score=378.15 Aligned_cols=219 Identities=35% Similarity=0.537 Sum_probs=202.2
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
|+|+++|++++|+....++|+|+||+|++||++||+|++|||||||+++|.|+.+|++|+|.++|.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999965334599999999999999999999999999999999999999999999999999888877888999
Q ss_pred EEEcccCcCCCCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 000452 1326 SIIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRK 1404 (1495)
Q Consensus 1326 siIpQdp~LF~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ 1404 (1495)
+|+||+|.+|..|+++|+... ...+++++.++++..++.+.+...|.|+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999743 2345667888999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEec
Q 000452 1405 ILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1405 ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~g 1464 (1495)
+|||||||++||.++...+.+.|++..+++|||+++|+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999886678999999999988889999999999998764
No 123
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-41 Score=362.23 Aligned_cols=226 Identities=28% Similarity=0.426 Sum_probs=191.1
Q ss_pred eEEEeeeeEEeCCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCC-HHHHhc
Q 000452 1247 KIDLRDLQVRYAPHM--PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG-LHDLRT 1323 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~--~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~-l~~LR~ 1323 (1495)
.++++|+++.|+.+. -++|+||||+|.+||.+||||+||||||||.++|.|+.+|++|+|.+||.+..... .+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999997653 25999999999999999999999999999999999999999999999997766543 446788
Q ss_pred ccEEEcccCc--CC-CCcHHHhcC-CCCC----CCHHHHHHHHHHcCCcHHH-HhccCCcccccccCCCCCCchHHHHHH
Q 000452 1324 RLSIIPQDPV--MF-EGTVRSNVD-PLEE----YTDEQIWEALDKCQLGDEV-RKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1324 ~isiIpQdp~--LF-~GTIR~NLd-p~~~----~sd~ei~~aL~~~~L~~~v-~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
.+.+|+|||. |= .-||++-|. |... -..++++++|+.+||.+.+ ...| ..||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 9999999995 22 237777764 4432 2345699999999997654 3444 358999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCc--EEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDC--TVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~--TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
|||||.-+|++||+|||||+||.-..+.|.+.+.+..+++ |.|+|+|++..+.. ||||+||++|+++|.++-+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 9999999999999999999999999999999998876654 99999999999987 99999999999999999999997
Q ss_pred cCCChHHHHHHH
Q 000452 1472 NKSSSFSQLVAE 1483 (1495)
Q Consensus 1472 ~~~s~f~~lv~~ 1483 (1495)
.+...|.+..-+
T Consensus 232 ~~~h~ytr~Ll~ 243 (252)
T COG1124 232 HPSHPYTRELLE 243 (252)
T ss_pred CCccHHHHHHHH
Confidence 755555544433
No 124
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4e-40 Score=417.83 Aligned_cols=199 Identities=25% Similarity=0.311 Sum_probs=168.3
Q ss_pred CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc--CCccEEEEcCEeCCCCCHHHHhcccEEEcccC-cCCC
Q 000452 1260 HMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE--PAAGQILIDGIDISLIGLHDLRTRLSIIPQDP-VMFE 1336 (1495)
Q Consensus 1260 ~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e--p~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp-~LF~ 1336 (1495)
+....|+|||=-++||.-+|++|.||||||||++.|.+-.. ..+|+|+|||.+..+ +..++++|||-|++ ++=+
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 44568999999999999999999999999999999998754 357999999998765 77899999999987 4656
Q ss_pred CcHHHhcCC------CCCCCHHH----HHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC-Ce
Q 000452 1337 GTVRSNVDP------LEEYTDEQ----IWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRR-KI 1405 (1495)
Q Consensus 1337 GTIR~NLdp------~~~~sd~e----i~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~-~I 1405 (1495)
-||||-|.. -.+.+++| +.++.+..+|.+. =|..||.-|..||..||.||.||--|+.|| .|
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~-------~daiVG~~G~GLs~eQRKrLTIgVELvA~P~~i 951 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY-------ADALVGLPGSGLSTEQRKRLTIGVELVANPSSI 951 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh-------hhhhccCCCCCCCHHHhceeeEEEEEecCCcee
Confidence 699999852 12455554 4556666666543 356788889999999999999999999999 89
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhh--hccCEEEEEeC-cEEEEecChhH
Q 000452 1406 LMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSV--IDSDMVLLLSH-GLIEEYDSPRK 1468 (1495)
Q Consensus 1406 LiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti--~~~DrIlVL~~-G~ivE~gsp~~ 1468 (1495)
|.||||||+||+++...|.+++|+.. .|+||++.-|.++.. ..+|+++.|++ |+.|-+|++.+
T Consensus 952 lFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 952 LFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 99999999999999999999999876 689999999999863 56999999976 69999988654
No 125
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-41 Score=395.51 Aligned_cols=218 Identities=26% Similarity=0.361 Sum_probs=185.7
Q ss_pred cceEEEeeeeEEeCCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCC-----
Q 000452 1245 HGKIDLRDLQVRYAPHM---PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI----- 1316 (1495)
Q Consensus 1245 ~g~I~f~nv~~~Y~~~~---~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----- 1316 (1495)
...|+++|++++|+... .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.
T Consensus 19 ~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~ 98 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHE 98 (320)
T ss_pred CceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccc
Confidence 34699999999997432 3599999999999999999999999999999999999999999999999998753
Q ss_pred -----------CHHHHhcccEEEcccC--cCCCCcHHHhcCCCC---CCCHHH----HHHHHHHcCCcHHHHhccCCccc
Q 000452 1317 -----------GLHDLRTRLSIIPQDP--VMFEGTVRSNVDPLE---EYTDEQ----IWEALDKCQLGDEVRKKEGKLDS 1376 (1495)
Q Consensus 1317 -----------~l~~LR~~isiIpQdp--~LF~GTIR~NLdp~~---~~sd~e----i~~aL~~~~L~~~v~~lp~gLdt 1376 (1495)
....+|++++|+||+| .+|++|+++|+.... ..++++ +.++++.+++.+ .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~ 168 (320)
T PRK13631 99 LITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD----------S 168 (320)
T ss_pred ccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh----------h
Confidence 3567899999999998 699999999996321 233333 334455555431 2
Q ss_pred ccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhh-ccCEEEE
Q 000452 1377 KVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVI-DSDMVLL 1454 (1495)
Q Consensus 1377 ~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~-~~DrIlV 1454 (1495)
.....+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|++.. +++|||+|||+++.+. .||+|++
T Consensus 169 ~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~v 248 (320)
T PRK13631 169 YLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIV 248 (320)
T ss_pred HhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEE
Confidence 3455677899999999999999999999999999999999999999999998753 4789999999999874 6999999
Q ss_pred EeCcEEEEecChhHHhhc
Q 000452 1455 LSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1455 L~~G~ivE~gsp~~Ll~~ 1472 (1495)
|++|++++.|+|++++++
T Consensus 249 l~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 249 MDKGKILKTGTPYEIFTD 266 (320)
T ss_pred EECCEEEEeCCHHHHhcC
Confidence 999999999999988754
No 126
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=4e-41 Score=379.64 Aligned_cols=211 Identities=32% Similarity=0.526 Sum_probs=186.5
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc-----cCCccEEEEcCEeCCCCC--HHH
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIV-----EPAAGQILIDGIDISLIG--LHD 1320 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~-----ep~~G~I~IDG~dI~~i~--l~~ 1320 (1495)
|+++||+++|+.. ++|+|+||+|++||++||+|+||||||||+++|+|++ +|.+|+|.+||.++.+.+ ...
T Consensus 1 i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGDK--HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 5789999999643 5999999999999999999999999999999999999 999999999999998877 667
Q ss_pred HhcccEEEcccCcCCCCcHHHhcCCCC---C-C----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 000452 1321 LRTRLSIIPQDPVMFEGTVRSNVDPLE---E-Y----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1321 LR~~isiIpQdp~LF~GTIR~NLdp~~---~-~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
+|++++|+||+|.+|..|+++|+.... . . .++++.++++.+++.+...+.++ +.+||||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~qr 149 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQR 149 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHHH
Confidence 889999999999999889999996421 1 1 23567888999988766544321 46799999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHH
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1469 (1495)
++|||||+++|++|||||||++||+++...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|+|+++
T Consensus 150 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 150 LCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999999999999999999999999999988666899999999998875 999999999999999998764
No 127
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.1e-41 Score=374.61 Aligned_cols=213 Identities=31% Similarity=0.490 Sum_probs=188.8
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.++++|++++|.. .++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.||.+++.+++.++++
T Consensus 2 ~L~~~~ls~~y~~--~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYGG--KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEECC--eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 4789999999973 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccCcC-CCCcHHHhcC----C----CCCCC--HH-HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 000452 1327 IIPQDPVM-FEGTVRSNVD----P----LEEYT--DE-QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1327 iIpQdp~L-F~GTIR~NLd----p----~~~~s--d~-ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
|+||++.. |.-||+|=+. | +...+ |+ .+.+||+.+++.++..+. + ..||||||||++
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~---~--------~~LSGGerQrv~ 148 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP---V--------DELSGGERQRVL 148 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc---c--------cccChhHHHHHH
Confidence 99999754 4559988763 2 22223 33 478889999998876442 2 358999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchh-hhccCEEEEEeCcEEEEecChhHHhh
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITS-VIDSDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~t-i~~~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
|||||.++|+||+|||||++||....-.+.+.+++.- ++.|||+|.|+++. .+.||++++|++|+++..|+|++.+.
T Consensus 149 iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 149 IARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred HHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 9999999999999999999999999999999999876 36999999999976 56799999999999999999999985
Q ss_pred c
Q 000452 1472 N 1472 (1495)
Q Consensus 1472 ~ 1472 (1495)
.
T Consensus 229 ~ 229 (258)
T COG1120 229 E 229 (258)
T ss_pred H
Confidence 4
No 128
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.3e-41 Score=357.40 Aligned_cols=224 Identities=29% Similarity=0.474 Sum_probs=197.2
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHH---HHh
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH---DLR 1322 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR 1322 (1495)
-.|++++|+++|..+ .||+||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.||.+++-+ .+|
T Consensus 7 ~~I~vr~v~~~fG~~--~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 7 PLIEVRGVTKSFGDR--VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred ceEEEeeeeeecCCE--EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 369999999999654 599999999999999999999999999999999999999999999999999999864 469
Q ss_pred cccEEEcccCcCCCC-cHHHhcC-CCCCC---CHHHH----HHHHHHcCCcHHH-HhccCCcccccccCCCCCCchHHHH
Q 000452 1323 TRLSIIPQDPVMFEG-TVRSNVD-PLEEY---TDEQI----WEALDKCQLGDEV-RKKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1323 ~~isiIpQdp~LF~G-TIR~NLd-p~~~~---sd~ei----~~aL~~~~L~~~v-~~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
+++|++.|.-.||+. ||+||+. |..+| +++++ ..-|+.|||...+ ...| +.||||.|.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHHH
Confidence 999999999999988 9999997 55544 44444 3457888888774 3333 4689999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHH
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1469 (1495)
++||||+.-+|+||++|||||++|+.+...+-+.|++.- -+.|+|+|||+++++.. ||||+++.+|+|+-+|+|++|
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999888887754 37899999999999876 799999999999999999999
Q ss_pred hhcCCChHHHHHH
Q 000452 1470 LENKSSSFSQLVA 1482 (1495)
Q Consensus 1470 l~~~~s~f~~lv~ 1482 (1495)
.+.++...++.+.
T Consensus 234 ~~sd~P~v~qf~~ 246 (263)
T COG1127 234 LASDDPWVRQFFN 246 (263)
T ss_pred HhCCCHHHHHHhc
Confidence 9988766666554
No 129
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-41 Score=373.15 Aligned_cols=215 Identities=29% Similarity=0.458 Sum_probs=196.1
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCC-CCCHHHHhccc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDIS-LIGLHDLRTRL 1325 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~-~i~l~~LR~~i 1325 (1495)
.|+++|++|+|.++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 58999999999887 77999999999999999999999999999999999999999999999999999 48899999999
Q ss_pred EEEcccC--cCCCCcHHHhcCCCC---CCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1326 SIIPQDP--VMFEGTVRSNVDPLE---EYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1326 siIpQdp--~LF~GTIR~NLdp~~---~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
|+|.|+| .+|..||.+.+.+.. ..+. +.+.++|+.+++.++....| .+||||||||++||
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaIA 150 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAIA 150 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHhh
Confidence 9999999 799999999997432 3444 34788999999987744443 57899999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcC
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENK 1473 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1473 (1495)
.+|..+|+|||||||||+||+...+.+.+.+++... +.|+|+|+|+++.+.+ ||||+||++|+++.+|+|++++++.
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~~ 230 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFNDA 230 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhhh
Confidence 999999999999999999999999999999998764 4799999999999998 9999999999999999999999764
No 130
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-41 Score=365.73 Aligned_cols=187 Identities=38% Similarity=0.457 Sum_probs=163.7
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------EEEEcc
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------KAYVAQ 688 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------~ayv~Q 688 (1495)
.+++++++++|.. ..+|+|+||+|++||+++|+|||||||||||++|.|+.+|++|+|.++|. ++||+|
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ 79 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQ 79 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEec
Confidence 5889999999963 67999999999999999999999999999999999999999999999884 599999
Q ss_pred CCcccC-ccHHHHHhcCCCCC-------HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccC
Q 000452 689 SPWIQS-GKIEDNILFGKEMD-------RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQD 760 (1495)
Q Consensus 689 ~~~l~~-~ti~enI~fg~~~~-------~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1495)
++-++. .||+|||.||.+.. +++.++.++.++|...-+ ..+.+|||||||||+|||||..+
T Consensus 80 ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~-----------~~P~qLSGGMrQRVaiARAL~~~ 148 (248)
T COG1116 80 EDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFED-----------KYPHQLSGGMRQRVAIARALATR 148 (248)
T ss_pred cCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhh-----------cCccccChHHHHHHHHHHHHhcC
Confidence 987765 59999999987642 345667777777765443 56789999999999999999999
Q ss_pred CCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCcccc-CCEEEEEeCC
Q 000452 761 ADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPA-ADLVLVIKDG 817 (1495)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G 817 (1495)
|+|+||||||+|||+.|+.++.+++..-+. .++||++||||+++.-. +|||++|.++
T Consensus 149 P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 149 PKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred CCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 999999999999999999998877665554 37999999999998654 9999999984
No 131
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-41 Score=379.15 Aligned_cols=212 Identities=29% Similarity=0.436 Sum_probs=186.0
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCH---HHHhcc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL---HDLRTR 1324 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l---~~LR~~ 1324 (1495)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 578999999964 359999999999999999999999999999999999999999999999999988764 567889
Q ss_pred cEEEcccCcCCCC-cHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHH
Q 000452 1325 LSIIPQDPVMFEG-TVRSNVDPL----EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCL 1395 (1495)
Q Consensus 1325 isiIpQdp~LF~G-TIR~NLdp~----~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~L 1395 (1495)
++|+||+|.+|.+ |+++|+... ...+ ++++.++++.+++.+...+.+ .+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~i 147 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYP-----------AELSGGMKKRVAL 147 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHH
Confidence 9999999999987 999999632 1123 234677888888866543332 4699999999999
Q ss_pred HHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhc
Q 000452 1396 GRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1396 ARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
||||+++|+||||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 148 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 148 ARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999999998653 7899999999998875 999999999999999999998754
No 132
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-41 Score=360.44 Aligned_cols=203 Identities=29% Similarity=0.421 Sum_probs=176.0
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 684 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~a 684 (1495)
|+++|+++.|. ++.+++|+||+|++||+++++|||||||||+|+.|.++++|++|+|.++|. +|
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 78999999996 468999999999999999999999999999999999999999999999994 69
Q ss_pred EEccCCccc-CccHHHHHhcCCC---CCH----HHHHHHHHHhCcHH-HHhhcCCCCcccccCCCCccchHHHHHHHHHH
Q 000452 685 YVAQSPWIQ-SGKIEDNILFGKE---MDR----ERYNAVLDACSLEK-DLEILSFGDQTVVGERGINLSGGQKQRIQIAR 755 (1495)
Q Consensus 685 yv~Q~~~l~-~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~-dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 755 (1495)
||-|+.-+| +.||.|||.+-.. +++ +|.++.++..+|++ +. ..+.+.+|||||+|||.+||
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~----------~~RyP~eLSGGQQQRVGv~R 148 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEY----------ADRYPHELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHH----------hhcCchhcCcchhhHHHHHH
Confidence 999998887 5799999987543 344 34556666677754 23 24678999999999999999
Q ss_pred HhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCcc-ccCCEEEEEeCCEEEEecChHHHHhcCC
Q 000452 756 ALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFL-PAADLVLVIKDGKITQAGKYTDVINSGT 833 (1495)
Q Consensus 756 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 833 (1495)
||..+|+|+|+||||+||||-++..+-+++..-.. -+||+|+||||+++. ..+|+|.+|++|+|++.+++++++.+..
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pa 228 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPA 228 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCcc
Confidence 99999999999999999999999998766554333 389999999999985 5699999999999999999999997643
No 133
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.4e-41 Score=369.43 Aligned_cols=209 Identities=29% Similarity=0.429 Sum_probs=184.2
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++|++++|..+ + ||+||||+|++||.+||+||||||||||+++++|+++|++|+|.++|.+++.... +.+||
T Consensus 4 ~i~v~nl~v~y~~~-~-vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR-P-VLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE-e-eeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 59999999999865 4 9999999999999999999999999999999999999999999999988765432 57899
Q ss_pred EEcccC---cCCCCcHHHhcCCC--------C---CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 000452 1327 IIPQDP---VMFEGTVRSNVDPL--------E---EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1327 iIpQdp---~LF~GTIR~NLdp~--------~---~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
||||.. .-|+-||+|=+... . ..+.+++.+||+++++.++..+ +++ .|||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r-------~i~----~LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDR-------QIG----ELSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCC-------ccc----ccCcHHHHH
Confidence 999965 46888999987532 1 1234789999999999977543 333 599999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC-CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS-DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~-~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
+.|||||+++|++|+|||||++||+.++..|.+.|++..+ +|||++|+|+++.+++ ||+|+.|+ +++...|+|++.+
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~ 226 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVL 226 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhcc
Confidence 9999999999999999999999999999999999988764 8999999999999976 99999995 6788999999998
Q ss_pred hc
Q 000452 1471 EN 1472 (1495)
Q Consensus 1471 ~~ 1472 (1495)
..
T Consensus 227 ~~ 228 (254)
T COG1121 227 TE 228 (254)
T ss_pred CH
Confidence 64
No 134
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.1e-40 Score=381.29 Aligned_cols=222 Identities=26% Similarity=0.353 Sum_probs=199.8
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC-------------eE
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TK 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g-------------~~ 683 (1495)
.|+++|++++|+.+ ..++|+|+||+|++||+++|+|+||||||||+++|.|+++ .+|+|.++| .+
T Consensus 2 ~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 2 QMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred eEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 48899999999632 3579999999999999999999999999999999999998 799999998 36
Q ss_pred EEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCE
Q 000452 684 AYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADI 763 (1495)
Q Consensus 684 ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 763 (1495)
+|+||+|+++++|++||+....++++++..++++.++|.+.++.+|.+.+|.+++.|.+||||||||++||||++.+|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999964445677888899999999999999999999999999999999999999999999999999
Q ss_pred eEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCCchhHHHHH
Q 000452 764 YLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGTDFMELVDA 841 (1495)
Q Consensus 764 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~l~~~ 841 (1495)
+||||||++||+.+.+.+.+ .+....+++|+|+|||+++.+..||+|++|++|++++.|+++++++....|.+++..
T Consensus 160 lllDEpts~LD~~~~~~l~~-~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~ 236 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRK-TLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISP 236 (275)
T ss_pred EEEECccccCCHHHHHHHHH-HHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhh
Confidence 99999999999999877764 455555689999999999988889999999999999999999999876556666543
No 135
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-40 Score=375.43 Aligned_cols=221 Identities=30% Similarity=0.498 Sum_probs=193.6
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+...+..++|++++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcccCcCCCCcHHHhcCCCC---CCCHHHHHHHHHHcCCc-HHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccC
Q 000452 1327 IIPQDPVMFEGTVRSNVDPLE---EYTDEQIWEALDKCQLG-DEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKR 1402 (1495)
Q Consensus 1327 iIpQdp~LF~GTIR~NLdp~~---~~sd~ei~~aL~~~~L~-~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~ 1402 (1495)
|+||+|.+|+.|+++|+.... ...++++.+.++..++. +... .....||+|||||++||||++++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYAT-----------RDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhh-----------CCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999997422 22345678888888875 2222 23457999999999999999999
Q ss_pred CCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCCChHHH
Q 000452 1403 RKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKSSSFSQ 1479 (1495)
Q Consensus 1403 ~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~ 1479 (1495)
|++|||||||++||.++...+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++++++.++...+.+
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 99999999999999999999999999864 37899999999999875 9999999999999999999998765444544
Q ss_pred H
Q 000452 1480 L 1480 (1495)
Q Consensus 1480 l 1480 (1495)
.
T Consensus 230 ~ 230 (241)
T PRK14250 230 L 230 (241)
T ss_pred H
Confidence 3
No 136
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=377.85 Aligned_cols=218 Identities=24% Similarity=0.413 Sum_probs=193.5
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc---CCccEEEEcCEeCCCCCHHHHhc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE---PAAGQILIDGIDISLIGLHDLRT 1323 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e---p~~G~I~IDG~dI~~i~l~~LR~ 1323 (1495)
.|+++|++++|+. +++|+|+||+|++||.+||+|+||||||||+++|+|+++ |++|+|.+||.|+.+.+...+|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 4789999999964 459999999999999999999999999999999999985 68999999999999888888899
Q ss_pred ccEEEcccCcCCCCcHHHhcCCCC---C------CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 000452 1324 RLSIIPQDPVMFEGTVRSNVDPLE---E------YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1324 ~isiIpQdp~LF~GTIR~NLdp~~---~------~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
+++|+||+|.+|..|+++|+.... . ..++++.++++.+++.+.+..+ ..+.+.+||+|||||++
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDK-------LKQNALALSGGQQQRLC 152 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHH-------hcCCcccCCHHHHHHHH
Confidence 999999999999999999996421 1 1234578889999987665432 23456789999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhhcC
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLENK 1473 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~~~ 1473 (1495)
|||||+++|+||+|||||++||..+...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|+++++...+
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 232 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENP 232 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCC
Confidence 99999999999999999999999999999999998777899999999999886 59999999999999999999998654
No 137
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-41 Score=368.32 Aligned_cols=204 Identities=28% Similarity=0.399 Sum_probs=174.3
Q ss_pred cEEEEeeEEEecCCC--CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------
Q 000452 617 AIEIADGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------ 682 (1495)
.|+++++++.|.... ..++|+||||+|++||+.+|+|.||+|||||+++|.++-.|++|+|.++|.
T Consensus 1 mI~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 1 MIELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred CeEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 378999999997521 246899999999999999999999999999999999999999999999993
Q ss_pred ----EEEEccCCcccC-ccHHHHHhcCCCC---C-HH---HHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHH
Q 000452 683 ----KAYVAQSPWIQS-GKIEDNILFGKEM---D-RE---RYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQR 750 (1495)
Q Consensus 683 ----~ayv~Q~~~l~~-~ti~enI~fg~~~---~-~~---~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 750 (1495)
+|+++|++.+++ .||.+||.|..+. + ++ |..+.++-.+|.+.. +..+.+||||||||
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~-----------~~yP~qLSGGQKQR 149 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKA-----------DRYPAQLSGGQKQR 149 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhh-----------ccCchhcCcchhhH
Confidence 699999999886 7999999997542 2 23 333444445554322 46789999999999
Q ss_pred HHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH--hCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000452 751 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL--LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~--~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 827 (1495)
|+|||||..+|+|+|.|||||||||++.+.|.+. +... .-|-|+++|||.++.++. ||++.+|++|++++.|+..|
T Consensus 150 VaIARALa~~P~iLL~DEaTSALDP~TT~sIL~L-L~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~ 228 (339)
T COG1135 150 VAIARALANNPKILLCDEATSALDPETTQSILEL-LKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSE 228 (339)
T ss_pred HHHHHHHhcCCCEEEecCccccCChHHHHHHHHH-HHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHH
Confidence 9999999999999999999999999999999864 4333 238999999999999987 99999999999999999999
Q ss_pred HHhcC
Q 000452 828 VINSG 832 (1495)
Q Consensus 828 l~~~~ 832 (1495)
+....
T Consensus 229 vF~~P 233 (339)
T COG1135 229 VFANP 233 (339)
T ss_pred hhcCc
Confidence 88654
No 138
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-40 Score=381.86 Aligned_cols=217 Identities=24% Similarity=0.434 Sum_probs=196.2
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++||+.+|.... ||+|||++|+.||.++++||||||||||+++|.||.+|++|+|.|||.|++++++.+ +.|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 689999999997654 999999999999999999999999999999999999999999999999999999886 7899
Q ss_pred EEcccCcCCCC-cHHHhcCC-CC------CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 000452 1327 IIPQDPVMFEG-TVRSNVDP-LE------EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1398 (1495)
Q Consensus 1327 iIpQdp~LF~G-TIR~NLdp-~~------~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1398 (1495)
+|+|++.||+. ||++||.+ .. +--++++.++++..++.+.+.+.|. .||||||||++||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHHHH
Confidence 99999999987 99999973 22 1236678999999999999988875 579999999999999
Q ss_pred HccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhhcCCC
Q 000452 1399 LLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLENKSS 1475 (1495)
Q Consensus 1399 LLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~~~~s 1475 (1495)
|+++|++++||||.|+||++....+...|++..+ +.|+|.|||+....+ -+|||.||++|+|.+.|+|.|+.+++..
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n 227 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPAN 227 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccc
Confidence 9999999999999999999999888887777543 589999999987766 4999999999999999999999998877
Q ss_pred hHH
Q 000452 1476 SFS 1478 (1495)
Q Consensus 1476 ~f~ 1478 (1495)
.|-
T Consensus 228 ~fV 230 (338)
T COG3839 228 LFV 230 (338)
T ss_pred hhh
Confidence 663
No 139
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-40 Score=383.46 Aligned_cols=215 Identities=28% Similarity=0.434 Sum_probs=191.7
Q ss_pred eEEEeeeeEEeCCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1247 KIDLRDLQVRYAPH-MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~-~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
.|+++||+++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743 34599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcccC--cCCCCcHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1326 SIIPQDP--VMFEGTVRSNVDPLE---EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1326 siIpQdp--~LF~GTIR~NLdp~~---~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
+|+||+| .++..||++||.... ..+ ++++.++++.+++.++....| .+||+|||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 366779999997421 123 356788999999877655443 47999999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
|||+++|+||||||||++||+.+...+.+.|++..+ ++|||+|||+++.+..||+|++|++|++++.|+++++.++
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 7999999999999988999999999999999999998754
No 140
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-40 Score=364.47 Aligned_cols=199 Identities=35% Similarity=0.551 Sum_probs=172.9
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC----------eEEEE
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG----------TKAYV 686 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g----------~~ayv 686 (1495)
.|+++|++++|+. . ++|+||||++++|++++|+||||||||||+|+|+|+++|.+|+|.+.| ++|||
T Consensus 4 ~i~v~nl~v~y~~--~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYV 80 (254)
T COG1121 4 MIEVENLTVSYGN--R-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYV 80 (254)
T ss_pred EEEEeeeEEEECC--E-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEc
Confidence 5899999999963 2 699999999999999999999999999999999999999999999876 48999
Q ss_pred ccCC---cccCccHHHHHhcCCCC-----------CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHH
Q 000452 687 AQSP---WIQSGKIEDNILFGKEM-----------DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQ 752 (1495)
Q Consensus 687 ~Q~~---~l~~~ti~enI~fg~~~-----------~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 752 (1495)
||.. |-|+.||+|-+.+|... |+++.+++++..++.+ +. .++..+|||||+|||-
T Consensus 81 PQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~-~~----------~r~i~~LSGGQ~QRV~ 149 (254)
T COG1121 81 PQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMED-LR----------DRQIGELSGGQKQRVL 149 (254)
T ss_pred CcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchh-hh----------CCcccccCcHHHHHHH
Confidence 9964 67889999999998432 3477788888888864 32 4677899999999999
Q ss_pred HHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000452 753 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
|||||.++||+++|||||+|+|+.++..+++ ++..+ .+|+||++||||++.+.. +|+|+.|+ +++...|++++..+
T Consensus 150 lARAL~~~p~lllLDEP~~gvD~~~~~~i~~-lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~~ 227 (254)
T COG1121 150 LARALAQNPDLLLLDEPFTGVDVAGQKEIYD-LLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVLT 227 (254)
T ss_pred HHHHhccCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhccC
Confidence 9999999999999999999999999998886 45444 359999999999998764 99999995 57888899998875
Q ss_pred c
Q 000452 831 S 831 (1495)
Q Consensus 831 ~ 831 (1495)
.
T Consensus 228 ~ 228 (254)
T COG1121 228 E 228 (254)
T ss_pred H
Confidence 3
No 141
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.8e-40 Score=372.57 Aligned_cols=217 Identities=32% Similarity=0.511 Sum_probs=198.3
Q ss_pred CcceEEEeeeeEEeCCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHh
Q 000452 1244 SHGKIDLRDLQVRYAPH-MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLR 1322 (1495)
Q Consensus 1244 ~~g~I~f~nv~~~Y~~~-~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR 1322 (1495)
..|.++++|++++|+.. ..++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.+||.++...+....|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 35789999999999753 24599999999999999999999999999999999999999999999999999888878888
Q ss_pred cccEEEcccCcCCCCcHHHhcCC-CCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 000452 1323 TRLSIIPQDPVMFEGTVRSNVDP-LEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1401 (1495)
Q Consensus 1323 ~~isiIpQdp~LF~GTIR~NLdp-~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1401 (1495)
++++|+||+|.+|++|+++|++. ....+.+++++..++.++.+++..+|.|+++.+.+...+||+|||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999984 33344556777777788889999998899988999999999999999999999999
Q ss_pred CCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEE
Q 000452 1402 RRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLI 1460 (1495)
Q Consensus 1402 ~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~i 1460 (1495)
+|++|||||||++||+++...+.+.|++..+++|+|+|+|+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999998778999999999999989999999999975
No 142
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-40 Score=391.22 Aligned_cols=220 Identities=26% Similarity=0.415 Sum_probs=190.5
Q ss_pred EEEeeeeEEeCC--CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHH---Hh
Q 000452 1248 IDLRDLQVRYAP--HMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---LR 1322 (1495)
Q Consensus 1248 I~f~nv~~~Y~~--~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR 1322 (1495)
|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 2346999999999999999999999999999999999999999999999999999887654 47
Q ss_pred cccEEEcccCcCCC-CcHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 000452 1323 TRLSIIPQDPVMFE-GTVRSNVDPL---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1323 ~~isiIpQdp~LF~-GTIR~NLdp~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
++++|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+...+. ..+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRY-----------PAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHHH
Confidence 89999999999986 6999999632 1222 24567788888886654433 3479999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
|||||+++|+||+|||||++||+.+...+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999987
Q ss_pred cCCChHH
Q 000452 1472 NKSSSFS 1478 (1495)
Q Consensus 1472 ~~~s~f~ 1478 (1495)
++...+.
T Consensus 231 ~~~~~~~ 237 (343)
T PRK11153 231 HPKHPLT 237 (343)
T ss_pred CCCcHHH
Confidence 6544333
No 143
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.4e-40 Score=367.50 Aligned_cols=201 Identities=32% Similarity=0.463 Sum_probs=176.0
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC-------------eE
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TK 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g-------------~~ 683 (1495)
.++++|++|+|+ ++++|+|+||++++|++++|+|||||||||||++|+|.++|.+|+|.++| .+
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 478999999996 46899999999999999999999999999999999999999999999999 46
Q ss_pred EEEccCCcc-cCccHHHHHhcCCC-----------CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHH
Q 000452 684 AYVAQSPWI-QSGKIEDNILFGKE-----------MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRI 751 (1495)
Q Consensus 684 ayv~Q~~~l-~~~ti~enI~fg~~-----------~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 751 (1495)
|||||++.. +.-||+|-+.+|+. -|++..+++++.+++++.. .+...+|||||||||
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-----------~r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-----------DRPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-----------cCcccccChhHHHHH
Confidence 999999755 46699999999852 1344566778888887644 366789999999999
Q ss_pred HHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHHHH
Q 000452 752 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTDVI 829 (1495)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 829 (1495)
.|||||+++|+|+|||||||+||....-++++.+.... .+|+|+|+|+||+++.. .||++++|++|+++..|+++|++
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999987554433 34899999999999864 59999999999999999999887
Q ss_pred hc
Q 000452 830 NS 831 (1495)
Q Consensus 830 ~~ 831 (1495)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 54
No 144
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.1e-40 Score=370.66 Aligned_cols=210 Identities=24% Similarity=0.350 Sum_probs=183.5
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++||+++|+.+..++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.... .++|++++|
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEE
Confidence 5789999999753245999999999999999999999999999999999999999999999999987643 667889999
Q ss_pred EcccCcCC-CCcHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMF-EGTVRSNVDPLE---EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF-~GTIR~NLdp~~---~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||+|.+| ..|+++|+.... ..+ ++++.++++..++.+.... . ..+||+|||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~----~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANK-------R----ARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhC-------h----hhhCCHHHHHHHHHHHHH
Confidence 99999998 579999986311 122 2457788888887654332 2 247999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHH
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1469 (1495)
+++|++|||||||++||+.+.+.+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999988777999999999999875 999999999999999998875
No 145
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-40 Score=383.06 Aligned_cols=215 Identities=28% Similarity=0.467 Sum_probs=186.8
Q ss_pred eEEEeeeeEEeCCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCC--HHHH
Q 000452 1247 KIDLRDLQVRYAPHM---PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG--LHDL 1321 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~---~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~--l~~L 1321 (1495)
.|+++||+++|+... .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++..+ ...+
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 388999999997532 36999999999999999999999999999999999999999999999999998753 4678
Q ss_pred hcccEEEcccC--cCCCCcHHHhcCCCC---CCCH----HHHHHHHHHcCCc--HHHHhccCCcccccccCCCCCCchHH
Q 000452 1322 RTRLSIIPQDP--VMFEGTVRSNVDPLE---EYTD----EQIWEALDKCQLG--DEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1322 R~~isiIpQdp--~LF~GTIR~NLdp~~---~~sd----~ei~~aL~~~~L~--~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
|++++|+||+| .+|+.|+++|+.... ..++ +++.++++.++|. +. .......||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~~~LSgGq~ 150 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDY-----------KDKSPFELSGGQK 150 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhh-----------ccCCcccCCHHHH
Confidence 99999999998 578999999996321 2333 3467888888885 22 2233467999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChh
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPR 1467 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~ 1467 (1495)
||++|||||+.+|+||||||||++||+.+...+.+.|++..+ +.|||+|||+++.+. .||||++|++|++++.|+++
T Consensus 151 qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~ 230 (287)
T PRK13637 151 RRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPR 230 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999998753 789999999999885 59999999999999999999
Q ss_pred HHhhc
Q 000452 1468 KLLEN 1472 (1495)
Q Consensus 1468 ~Ll~~ 1472 (1495)
+++++
T Consensus 231 ~~~~~ 235 (287)
T PRK13637 231 EVFKE 235 (287)
T ss_pred HHHhC
Confidence 98753
No 146
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.6e-40 Score=364.08 Aligned_cols=199 Identities=25% Similarity=0.428 Sum_probs=183.5
Q ss_pred EEEeeeeEEeCCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcc
Q 000452 1248 IDLRDLQVRYAPHM---PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTR 1324 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~---~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~ 1324 (1495)
|+++||+++|++.. +++|+|+||+|++||+++|+|++|||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57999999997642 4699999999999999999999999999999999999999999999999 6
Q ss_pred cEEEcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 000452 1325 LSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRK 1404 (1495)
Q Consensus 1325 isiIpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ 1404 (1495)
++|+||+|.+|++|+++|+.....+++++.+++++.+++.+++..+|.|+++.+.+.+.+||+|||||++||||++++|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998765667778899999999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCCCCHHHHHHHHH-HHHHhc-CCcEEEEEecCchhhhccCEEEEEeCcE
Q 000452 1405 ILMLDEATASVDTATDNLIQQ-SLRQHF-SDCTVITIAHRITSVIDSDMVLLLSHGL 1459 (1495)
Q Consensus 1405 ILiLDEaTsslD~~Td~~Iq~-~Ir~~f-~~~TVI~IAHRl~ti~~~DrIlVL~~G~ 1459 (1495)
+++|||||++||.++...+.+ .+++.. ++.|||+++|+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999877766 566554 3689999999999999999999999985
No 147
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=375.45 Aligned_cols=221 Identities=29% Similarity=0.466 Sum_probs=192.5
Q ss_pred cceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEEcCEeCCC--CC
Q 000452 1245 HGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IG 1317 (1495)
Q Consensus 1245 ~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~ 1317 (1495)
.+.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 467999999999964 359999999999999999999999999999999999986 589999999999863 45
Q ss_pred HHHHhcccEEEcccCcCCCCcHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 000452 1318 LHDLRTRLSIIPQDPVMFEGTVRSNVDPL----EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1318 l~~LR~~isiIpQdp~LF~GTIR~NLdp~----~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1389 (1495)
...+|++++|+||+|.+|..|+++|+... ...+ +++++++++.+++.+.+.. ...+...+||+||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKD-------KLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHH-------HHhcCCCCCCHHH
Confidence 66789999999999999999999999632 1222 3567888999888654432 2334567899999
Q ss_pred HHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhH
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1390 rQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1468 (1495)
|||++|||||+++|+||||||||++||..+...+.+.|++..++.|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 241 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDT 241 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988777899999999998864 99999999999999999999
Q ss_pred HhhcCC
Q 000452 1469 LLENKS 1474 (1495)
Q Consensus 1469 Ll~~~~ 1474 (1495)
+++.+.
T Consensus 242 ~~~~~~ 247 (260)
T PRK10744 242 IFTKPA 247 (260)
T ss_pred HHhCCC
Confidence 986543
No 148
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-40 Score=389.77 Aligned_cols=217 Identities=22% Similarity=0.378 Sum_probs=191.6
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++|++++|+.+ ..+|+|+||+|++||.+||+|+||||||||+++|.|+.+|++|+|.+||.++.+++.+ +++++
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 48999999999433 3599999999999999999999999999999999999999999999999999987765 47899
Q ss_pred EEcccCcCCCC-cHHHhcCCC-C--CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 000452 1327 IIPQDPVMFEG-TVRSNVDPL-E--EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1398 (1495)
Q Consensus 1327 iIpQdp~LF~G-TIR~NLdp~-~--~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1398 (1495)
||||++.+|.. |+++|+... . ..+ ++++.++++.+++.++..+.| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalARA 148 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGRA 148 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999965 999999732 1 223 245778899999987766655 3689999999999999
Q ss_pred HccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhhcCCC
Q 000452 1399 LLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLENKSS 1475 (1495)
Q Consensus 1399 LLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~~~~s 1475 (1495)
|+++|+||+||||||+||..+...+.+.|++..+ +.|+|+|||+++.+. .||+|++|++|++++.|+|+++++++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (356)
T PRK11650 149 IVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPAS 228 (356)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCcc
Confidence 9999999999999999999999999999988654 689999999999776 5999999999999999999999987765
Q ss_pred hH
Q 000452 1476 SF 1477 (1495)
Q Consensus 1476 ~f 1477 (1495)
.|
T Consensus 229 ~~ 230 (356)
T PRK11650 229 TF 230 (356)
T ss_pred HH
Confidence 44
No 149
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-40 Score=374.41 Aligned_cols=219 Identities=26% Similarity=0.441 Sum_probs=190.4
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEEcCEeCCC--CCHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1319 (1495)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 359999999999999999999999999999999999975 589999999999875 3456
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCC----CC----CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPL----EE----YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~----~~----~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
.+|++++|+||+|.+|.+|+++|+... +. ..++++.++++.+++.+.+.. .......+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~q 156 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQQ 156 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHHH
Confidence 788999999999999999999999631 11 124567888999988765432 223445689999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++|||||+++|+||+|||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999865 9999999999999999999998
Q ss_pred hcCC
Q 000452 1471 ENKS 1474 (1495)
Q Consensus 1471 ~~~~ 1474 (1495)
+++.
T Consensus 237 ~~~~ 240 (253)
T PRK14242 237 TRPR 240 (253)
T ss_pred cCCC
Confidence 6543
No 150
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-40 Score=379.45 Aligned_cols=215 Identities=27% Similarity=0.419 Sum_probs=192.5
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.++++||+++|+...+++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|++++
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999754456999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcccC--cCCCCcHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1327 IIPQDP--VMFEGTVRSNVDPLE---EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1327 iIpQdp--~LF~GTIR~NLdp~~---~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
|+||+| .+++.|+++||.... ..+ ++++.++++.++|.+.+...| ..||+|||||++|||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~lar 153 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIAG 153 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 567789999996421 123 245788889999887766655 368999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
||+.+|+||||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+..||+|++|++|++++.|+++++.+.
T Consensus 154 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 154 VLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998764 7899999999999989999999999999999999988753
No 151
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=3e-40 Score=339.33 Aligned_cols=207 Identities=27% Similarity=0.388 Sum_probs=187.7
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHH---Hhcc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---LRTR 1324 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR~~ 1324 (1495)
|+|+||+.+|+.+ +++|+||||+|++||.+=++|+||||||||+++|++...|++|+|.++|.|++++.-++ ||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 8999999999877 77999999999999999999999999999999999999999999999999999988655 8999
Q ss_pred cEEEcccCcCCCC-cHHHhcC-CCC--CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1325 LSIIPQDPVMFEG-TVRSNVD-PLE--EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1325 isiIpQdp~LF~G-TIR~NLd-p~~--~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
||+|.||--|... |+.||+. |.. ..+ .+++.++|+.+||.+....+|. .|||||+||+|||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaIA 149 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAIA 149 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHHH
Confidence 9999999987755 9999996 432 222 3467899999999999998885 5799999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecCh
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSP 1466 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp 1466 (1495)
||+..+|++|+-||||-|||+++...|.+.+.+.- .|.||++.||+.+.+.+ --|++.+++|+++..+++
T Consensus 150 RAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 150 RAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 99999999999999999999999999999988764 58999999999999987 468999999999987765
No 152
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=374.05 Aligned_cols=222 Identities=26% Similarity=0.399 Sum_probs=191.7
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCC--CCHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISL--IGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~l~ 1319 (1495)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. ....
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 7 IIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred eEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 6999999999964 3599999999999999999999999999999999999997 48999999999864 3456
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCCC----CC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPLE----EY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~~----~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
.+|++++|+||+|.+|..|+++|+.... .. .++++.++++.+++.+.+. +.+|+ ...+|||||||
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~~~----~~~~LSgG~~q 157 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK---DKLNT----NALSLSGGQQQ 157 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH---HHHhC----CcccCCHHHHH
Confidence 6889999999999999999999996321 11 2456778888888865442 23444 45689999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++|||||+++|++|||||||++||..+...+.+.|++..+++|||+|+|+++.+.. ||||++|++|++++.|+++++.
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 158 RLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777999999999999865 9999999999999999999998
Q ss_pred hcCCChH
Q 000452 1471 ENKSSSF 1477 (1495)
Q Consensus 1471 ~~~~s~f 1477 (1495)
+++.-.|
T Consensus 238 ~~~~~~~ 244 (254)
T PRK14273 238 FNPKNTK 244 (254)
T ss_pred hCCCChH
Confidence 7654333
No 153
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-39 Score=370.68 Aligned_cols=212 Identities=25% Similarity=0.396 Sum_probs=183.7
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 2 SIEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 3789999999964 459999999999999999999999999999999999999999999999999876653 367899
Q ss_pred EEcccCcCCC-CcHHHhcCCCC---CC----C----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 000452 1327 IIPQDPVMFE-GTVRSNVDPLE---EY----T----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1327 iIpQdp~LF~-GTIR~NLdp~~---~~----s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
|+||+|.+|. .|+++|+.... .. + ++++.++++.+++.+...+. ..+||+|||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRY-----------PAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcC-----------hhhCCHHHHHHHH
Confidence 9999999986 59999997421 11 1 23466778888876554433 3479999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
|||||+++|++|||||||++||+++...+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998653 7899999999998765 99999999999999999999986
Q ss_pred cC
Q 000452 1472 NK 1473 (1495)
Q Consensus 1472 ~~ 1473 (1495)
++
T Consensus 227 ~~ 228 (239)
T cd03296 227 HP 228 (239)
T ss_pred CC
Confidence 54
No 154
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.2e-39 Score=372.19 Aligned_cols=221 Identities=27% Similarity=0.464 Sum_probs=190.9
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----ccEEEEcCEeCCCC--CHHH
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPA-----AGQILIDGIDISLI--GLHD 1320 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~-----~G~I~IDG~dI~~i--~l~~ 1320 (1495)
|+++||+++|+.. .+|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGEK--EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECCe--eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 7899999999743 4999999999999999999999999999999999999998 99999999999763 4566
Q ss_pred HhcccEEEcccCcCCCCcHHHhcCCC---CC-CC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 000452 1321 LRTRLSIIPQDPVMFEGTVRSNVDPL---EE-YT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1321 LR~~isiIpQdp~LF~GTIR~NLdp~---~~-~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
.|++++|+||+|.+|..|+++|+... .. .+ ++++.++++..++.+.+.. .......+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgG~~qr 152 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKD-------RLHDSALGLSGGQQQR 152 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhh-------HhhCCcccCCHHHHHH
Confidence 78999999999999999999999631 11 12 3467888999998744421 1223446899999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++++
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987767999999999998865 99999999999999999999987
Q ss_pred cCCChH
Q 000452 1472 NKSSSF 1477 (1495)
Q Consensus 1472 ~~~s~f 1477 (1495)
++...+
T Consensus 233 ~~~~~~ 238 (247)
T TIGR00972 233 NPKEKR 238 (247)
T ss_pred CCCChH
Confidence 654443
No 155
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-40 Score=387.61 Aligned_cols=217 Identities=24% Similarity=0.415 Sum_probs=192.0
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
..|+++|++++|.. ..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+.+ |+++
T Consensus 5 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred cEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 36999999999964 4599999999999999999999999999999999999999999999999999887654 6789
Q ss_pred EEEcccCcCCCC-cHHHhcCCC-C--CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1326 SIIPQDPVMFEG-TVRSNVDPL-E--EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLdp~-~--~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
+|++|++.+|.. |+++|+... . ..+ ++++.++++..++.++..+.| ..||||||||++|||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----------~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV-----------DQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999976 999999732 1 122 456788899999876654443 468999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCC
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKS 1474 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~ 1474 (1495)
||+++|+||+||||||+||..+...+.+.|++..+ ++|+|+|||+++.+.. ||+|+||++|+|++.|+|+++.+++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999998754 7899999999998855 99999999999999999999998876
Q ss_pred ChH
Q 000452 1475 SSF 1477 (1495)
Q Consensus 1475 s~f 1477 (1495)
..|
T Consensus 230 ~~~ 232 (351)
T PRK11432 230 SRF 232 (351)
T ss_pred chH
Confidence 544
No 156
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-40 Score=378.97 Aligned_cols=212 Identities=27% Similarity=0.381 Sum_probs=188.7
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999643 45999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEcccC--cCCCCcHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1327 IIPQDP--VMFEGTVRSNVDPLE---EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1327 iIpQdp--~LF~GTIR~NLdp~~---~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
|+||+| .+|..|+++|+.... ..+ ++++.++++.+++.+...+.| ..||||||||++|||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~lar 151 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIAG 151 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999 688899999997321 122 346788899999976655544 368999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHh
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
||+++|++|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+. .||||++|++|++++.|+++++.
T Consensus 152 aL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 152 VLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999999999998874 3789999999999985 59999999999999999997653
No 157
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-40 Score=373.02 Aligned_cols=211 Identities=29% Similarity=0.420 Sum_probs=184.2
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCC---HHHHhcc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG---LHDLRTR 1324 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~---l~~LR~~ 1324 (1495)
++++||+++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999642 45999999999999999999999999999999999999999999999999998876 5668899
Q ss_pred cEEEcccCcCCC-CcHHHhcCCC------------C---CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 000452 1325 LSIIPQDPVMFE-GTVRSNVDPL------------E---EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1388 (1495)
Q Consensus 1325 isiIpQdp~LF~-GTIR~NLdp~------------~---~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~G 1388 (1495)
++|+||++.+|. .|+++|+... + ...++++.++++..++.+... ..+.+||+|
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G 148 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAY-----------QRADQLSGG 148 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhC-----------CCcccCCHH
Confidence 999999998887 6999999521 1 112345677788887754332 244679999
Q ss_pred HHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecC
Q 000452 1389 QRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDS 1465 (1495)
Q Consensus 1389 QrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gs 1465 (1495)
||||++|||||+++|+||||||||++||+.+...+.+.|++.. .++|||+|+|+++.+. .||+|++|++|++++.|+
T Consensus 149 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 228 (241)
T cd03256 149 QQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGP 228 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999999999999999999999875 3799999999999998 599999999999999999
Q ss_pred hhHHh
Q 000452 1466 PRKLL 1470 (1495)
Q Consensus 1466 p~~Ll 1470 (1495)
++++.
T Consensus 229 ~~~~~ 233 (241)
T cd03256 229 PAELT 233 (241)
T ss_pred HHHhh
Confidence 99874
No 158
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.4e-39 Score=354.62 Aligned_cols=204 Identities=30% Similarity=0.427 Sum_probs=177.6
Q ss_pred EEEeeeeEEeCCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHH---H-
Q 000452 1248 IDLRDLQVRYAPHM--PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---L- 1321 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~--~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---L- 1321 (1495)
++++||+..|..+. ..+|+|+||+|++||.|+|+||||||||||+++|-++..|++|+|.++|.|+..++-++ +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67899999997543 36999999999999999999999999999999999999999999999999999998543 3
Q ss_pred hcccEEEcccCcCCCC-cHHHhcC-C--CCCC----CHHHHHHHHHHcCCcHHHH-hccCCcccccccCCCCCCchHHHH
Q 000452 1322 RTRLSIIPQDPVMFEG-TVRSNVD-P--LEEY----TDEQIWEALDKCQLGDEVR-KKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1322 R~~isiIpQdp~LF~G-TIR~NLd-p--~~~~----sd~ei~~aL~~~~L~~~v~-~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
|++||+|+|+..|++. |++||+. | +... .++.+.+.++..++.+... +.| ..||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p-----------~eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP-----------SELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc-----------hhcCHHHHHH
Confidence 5679999999998876 9999986 2 2222 2455677778888876655 334 4689999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhccCEEEEEeCcEEEE
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVIDSDMVLLLSHGLIEE 1462 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE 1462 (1495)
++|||||+.+|+|++.||||+|||.+|.+.|.+.+++.- .++|+|+|||+......|||++.|.+|++.+
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999875 3789999999999999999999999999543
No 159
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=7.5e-40 Score=371.56 Aligned_cols=212 Identities=26% Similarity=0.417 Sum_probs=182.8
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHH-hcccE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL-RTRLS 1326 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~is 1326 (1495)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |.+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999964 359999999999999999999999999999999999999999999999999998876654 67899
Q ss_pred EEcccCcCCCC-cHHHhcCCCC----CC-------------CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 000452 1327 IIPQDPVMFEG-TVRSNVDPLE----EY-------------TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1388 (1495)
Q Consensus 1327 iIpQdp~LF~G-TIR~NLdp~~----~~-------------sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~G 1388 (1495)
|+||+|.+|.+ |+++|+.... .. .++++.++++..++.+.. ......||||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG 147 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLA-----------DRPAGELSYG 147 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchh-----------hCChhhCCHH
Confidence 99999999987 9999985321 10 122455666666654332 3344579999
Q ss_pred HHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecCh
Q 000452 1389 QRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSP 1466 (1495)
Q Consensus 1389 QrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp 1466 (1495)
||||++|||||+++|++|||||||++||+.+...+.+.|++.. .++|+|+|+|+++.+.. ||+|++|++|++++.|++
T Consensus 148 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 227 (236)
T cd03219 148 QQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTP 227 (236)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCH
Confidence 9999999999999999999999999999999999999998865 57899999999999866 999999999999999999
Q ss_pred hHHhhc
Q 000452 1467 RKLLEN 1472 (1495)
Q Consensus 1467 ~~Ll~~ 1472 (1495)
++++++
T Consensus 228 ~~~~~~ 233 (236)
T cd03219 228 DEVRNN 233 (236)
T ss_pred HHhccC
Confidence 998754
No 160
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.4e-40 Score=367.60 Aligned_cols=202 Identities=24% Similarity=0.350 Sum_probs=177.0
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHH---HHhcc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH---DLRTR 1324 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR~~ 1324 (1495)
|+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999965434699999999999999999999999999999999999999999999999999876543 47889
Q ss_pred cEEEcccCcCCC-CcHHHhcCCC----C---CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1325 LSIIPQDPVMFE-GTVRSNVDPL----E---EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1325 isiIpQdp~LF~-GTIR~NLdp~----~---~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
++|+||+|.+|. .|+++|+... + +..++++.++++.+++.+.....| .+||||||||++||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~la 150 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAIA 150 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999887 4999999631 1 113456888999999876655443 36999999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEE
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLI 1460 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~i 1460 (1495)
|||+++|+||+|||||++||+++...+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999998864 37899999999999875 899999999975
No 161
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=373.50 Aligned_cols=222 Identities=24% Similarity=0.493 Sum_probs=191.1
Q ss_pred CCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEEcCEeCCC--
Q 000452 1243 PSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL-- 1315 (1495)
Q Consensus 1243 p~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~-- 1315 (1495)
|....|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++..
T Consensus 9 ~~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~ 86 (269)
T PRK14259 9 SKNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPR 86 (269)
T ss_pred CCCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 34457999999999964 359999999999999999999999999999999999987 689999999999863
Q ss_pred CCHHHHhcccEEEcccCcCCCCcHHHhcCCCC---CC---CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 000452 1316 IGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE---EY---TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1316 i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~---~~---sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1389 (1495)
.+..++|++++|+||+|.+|.+|+++|+.... .+ .++++.++++.+++.+.+. ........+||+||
T Consensus 87 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 159 (269)
T PRK14259 87 VDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSGGQ 159 (269)
T ss_pred CCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCHHH
Confidence 56678899999999999999999999997432 11 2456777888888754332 22334456899999
Q ss_pred HHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeC-----------
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSH----------- 1457 (1495)
Q Consensus 1390 rQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~----------- 1457 (1495)
|||++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+|||+++.+.+ ||+|++|++
T Consensus 160 ~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~ 239 (269)
T PRK14259 160 QQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKV 239 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEecccccccccccc
Confidence 99999999999999999999999999999999999999988777999999999998865 999999996
Q ss_pred cEEEEecChhHHhhcC
Q 000452 1458 GLIEEYDSPRKLLENK 1473 (1495)
Q Consensus 1458 G~ivE~gsp~~Ll~~~ 1473 (1495)
|+++|.|+++++++++
T Consensus 240 g~~~~~~~~~~~~~~~ 255 (269)
T PRK14259 240 GYLVEFNETKKIFNSP 255 (269)
T ss_pred ceEEEeCCHHHHHhCc
Confidence 6799999999998754
No 162
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-40 Score=348.95 Aligned_cols=212 Identities=26% Similarity=0.411 Sum_probs=190.1
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCC---HHHHhc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG---LHDLRT 1323 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~---l~~LR~ 1323 (1495)
.|+++||+.+|+. ...+|+||||+|++||.|+|+|+||||||||+++|.|+.+|++|+|.++|.++.... ++++|+
T Consensus 3 ~i~~~nl~k~yp~-~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPG-GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCC-CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 5899999999974 456999999999999999999999999999999999999999999999999999988 777899
Q ss_pred ccEEEcccCcCCCC-cHHHhcCC------------CCCCCH---HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCc
Q 000452 1324 RLSIIPQDPVMFEG-TVRSNVDP------------LEEYTD---EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSM 1387 (1495)
Q Consensus 1324 ~isiIpQdp~LF~G-TIR~NLdp------------~~~~sd---~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~ 1387 (1495)
++|+|.|+|-|-+. |+-+|+.- ++-++. .+..+||+++++.+..-.. -++|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qr-----------a~~LSG 150 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQR-----------ASTLSG 150 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHH-----------hccCCc
Confidence 99999999998865 99999731 233444 4578899999998876543 347999
Q ss_pred hHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEec
Q 000452 1388 GQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1388 GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1464 (1495)
||+||++|||||.++|+|++-|||||+||+.+.+.|++.|++.. .+.|||+.-|.++..+. ||||+-|++|+|+-.|
T Consensus 151 GQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg 230 (258)
T COG3638 151 GQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDG 230 (258)
T ss_pred chhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeC
Confidence 99999999999999999999999999999999999999998865 47899999999999865 9999999999999999
Q ss_pred ChhHHh
Q 000452 1465 SPRKLL 1470 (1495)
Q Consensus 1465 sp~~Ll 1470 (1495)
++.||-
T Consensus 231 ~~~el~ 236 (258)
T COG3638 231 PASELT 236 (258)
T ss_pred Chhhhh
Confidence 999964
No 163
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.8e-39 Score=371.30 Aligned_cols=218 Identities=25% Similarity=0.357 Sum_probs=194.9
Q ss_pred cceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcc
Q 000452 1245 HGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTR 1324 (1495)
Q Consensus 1245 ~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~ 1324 (1495)
.+.|+++|++++ + .++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~---~-~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLV---G-APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEe---c-ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 456999999985 2 3599999999999999999999999999999999999999999999998 3
Q ss_pred cEEEcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 000452 1325 LSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRK 1404 (1495)
Q Consensus 1325 isiIpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ 1404 (1495)
++|+||+|.+|++|+++|+.....+.+.++.++++.+++.+.+..+|.++++.+.+.+.+||+|||||++|||||+++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998543445567788889999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCCCCCHHHHHHHHHH-HHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhcCCChHHHH
Q 000452 1405 ILMLDEATASVDTATDNLIQQS-LRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQL 1480 (1495)
Q Consensus 1405 ILiLDEaTsslD~~Td~~Iq~~-Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~l 1480 (1495)
||||||||++||+++...+.+. +++...++|||+|+|+++.+..||+|++|++|+++++|+++++.+. .+.|.+.
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~~ 255 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFSSK 255 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHHHH
Confidence 9999999999999999888764 4555568999999999999999999999999999999999999864 3344433
No 164
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-39 Score=369.78 Aligned_cols=214 Identities=29% Similarity=0.440 Sum_probs=186.5
Q ss_pred EEEeeeeEEeCCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHH---HHh
Q 000452 1248 IDLRDLQVRYAPHM--PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH---DLR 1322 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~--~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR 1322 (1495)
|+++|++++|+... .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996431 2699999999999999999999999999999999999999999999999999877654 357
Q ss_pred cccEEEcccCcCCC-CcHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 000452 1323 TRLSIIPQDPVMFE-GTVRSNVDPL---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1323 ~~isiIpQdp~LF~-GTIR~NLdp~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
++++|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+...+.+ .+||+|||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYP-----------AQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcCh-----------hhCCHHHHHHHH
Confidence 89999999999997 5999998631 1122 446788888888865544432 479999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
||||++++|++|||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+++++++
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999999865 99999999999999999999875
Q ss_pred c
Q 000452 1472 N 1472 (1495)
Q Consensus 1472 ~ 1472 (1495)
+
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 4
No 165
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=7.2e-40 Score=388.55 Aligned_cols=205 Identities=27% Similarity=0.389 Sum_probs=182.0
Q ss_pred CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHH----hcccEEEcccCcCCCC
Q 000452 1262 PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL----RTRLSIIPQDPVMFEG 1337 (1495)
Q Consensus 1262 ~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L----R~~isiIpQdp~LF~G 1337 (1495)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.|||.|+...+..++ |++++|+||++.+|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 459999999999999999999999999999999999999999999999999999998887 7899999999999975
Q ss_pred -cHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEE
Q 000452 1338 -TVRSNVDPL---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLD 1409 (1495)
Q Consensus 1338 -TIR~NLdp~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLD 1409 (1495)
||++|+... ...+ ++++.++|+.++|.++..+.| .+||||||||++|||||+++|+||+||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----------~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP-----------DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh-----------hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999631 1122 456788899998876655544 479999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhhcCCChH
Q 000452 1410 EATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLENKSSSF 1477 (1495)
Q Consensus 1410 EaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f 1477 (1495)
||||+||+.+.+.+++.+++.. .++|+|+|||+++.+. -||+|++|++|++++.|+|+++++++...|
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 9999999999999999998764 3799999999999865 599999999999999999999998764444
No 166
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-39 Score=370.61 Aligned_cols=215 Identities=24% Similarity=0.394 Sum_probs=187.7
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..++|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999753 459999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EcccCcCCC-CcHHHhcCCCC---CCC----HHHHHHHHHHcCCcH--HHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1328 IPQDPVMFE-GTVRSNVDPLE---EYT----DEQIWEALDKCQLGD--EVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1328 IpQdp~LF~-GTIR~NLdp~~---~~s----d~ei~~aL~~~~L~~--~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
+||+|.+|. .|+++|+.... ..+ ++++.++++..++.+ .. ...+.+||+|||||++|||
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~-----------~~~~~~LS~G~~qrv~lar 148 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFA-----------DRYPHELSGGQQQRVGVAR 148 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHH-----------hcChhhCCHHHHHHHHHHH
Confidence 999999996 69999996321 122 345777888888763 22 2334679999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCC
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKS 1474 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~ 1474 (1495)
|++++|++|+|||||++||+.+...+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+++++.+++.
T Consensus 149 al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~ 228 (242)
T cd03295 149 ALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSPA 228 (242)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCCC
Confidence 99999999999999999999999999999998753 7999999999998754 99999999999999999999976543
No 167
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.6e-39 Score=347.14 Aligned_cols=205 Identities=28% Similarity=0.418 Sum_probs=177.9
Q ss_pred cccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------
Q 000452 615 ETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1495)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------ 682 (1495)
...|++++++++|. ++.+++|+||+|++||+++|+||+||||||||++|+|+++|++|+|.++|.
T Consensus 6 ~~~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ 82 (263)
T COG1127 6 EPLIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYE 82 (263)
T ss_pred cceEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHH
Confidence 35799999999995 568999999999999999999999999999999999999999999999983
Q ss_pred ----EEEEccCCcccC-ccHHHHHhcCC----CCCHHHHHH----HHHHhCcHHH-HhhcCCCCcccccCCCCccchHHH
Q 000452 683 ----KAYVAQSPWIQS-GKIEDNILFGK----EMDRERYNA----VLDACSLEKD-LEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 683 ----~ayv~Q~~~l~~-~ti~enI~fg~----~~~~~~~~~----vl~~~~l~~d-l~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
.|+++|+--+|+ .||+||+.|.. ..+++.+++ -++.++|..+ .+.+ +.+||||++
T Consensus 83 ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----------PsELSGGM~ 151 (263)
T COG1127 83 IRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLY-----------PSELSGGMR 151 (263)
T ss_pred HHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----------chhhcchHH
Confidence 599999999986 59999999953 344444443 4778888777 5444 579999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhC--CCEEEEEecCCCcccc-CCEEEEEeCCEEEEecCh
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLN--SKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKY 825 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~--~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~ 825 (1495)
.|++||||+..||+|+++|||||+|||.++..+ ++++..+.+ +-|+|+||||++.+.. ||+++++.||+|...|++
T Consensus 152 KRvaLARAialdPell~~DEPtsGLDPI~a~~~-~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~ 230 (263)
T COG1127 152 KRVALARAIALDPELLFLDEPTSGLDPISAGVI-DELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTP 230 (263)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCcchHHHH-HHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCH
Confidence 999999999999999999999999999886554 677766544 7899999999998765 999999999999999999
Q ss_pred HHHHhcCCc
Q 000452 826 TDVINSGTD 834 (1495)
Q Consensus 826 ~~l~~~~~~ 834 (1495)
+|+.+++..
T Consensus 231 ~el~~sd~P 239 (263)
T COG1127 231 EELLASDDP 239 (263)
T ss_pred HHHHhCCCH
Confidence 999876543
No 168
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=9.7e-37 Score=370.24 Aligned_cols=467 Identities=18% Similarity=0.172 Sum_probs=335.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccc------cchhHHhcchhHHHhhh
Q 000452 968 MLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSG------RIINRASTDQSAVDLSI 1041 (1495)
Q Consensus 968 ~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G------~ilnR~s~D~~~vd~~l 1041 (1495)
..+.+|..++.+.......+.++......+.-..+-+.++++-+... .||.-.-.| ..=+|+..|+...-...
T Consensus 87 ~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~-~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t 165 (604)
T COG4178 87 QQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPR-RYYRLAQAGGIGLIDNPDQRIQEDIRNFTETT 165 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHhcccccCCCChHHhHHHHHHHHHhhH
Confidence 34678888888888888889999999999998999999998888766 555544443 23468888887766655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--------------HHH-HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000452 1042 PALIGSFAFSIIRVLGVIGVMSLVA--------------WQV-FIVF----IPVIATCIWYQQYYISSARELSRLVGVCK 1102 (1495)
Q Consensus 1042 ~~~l~~~~~~~~~~~~~~~~~~~~~--------------~~~-~~v~----ip~~~~~~~~~~~y~~~~r~l~rl~~~~~ 1102 (1495)
-.....++.++++++...+++.-.+ +.+ +.++ +...++..++.+-..+-.-+-.+.|..-|
T Consensus 166 ~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR 245 (604)
T COG4178 166 LDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFR 245 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHH
Confidence 5555556666665555544443111 111 1111 11122334566666666667777777766
Q ss_pred hhHHHHHHHhhcchHHHHhhccHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCCCC
Q 000452 1103 APLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSL-VFLISIPKGFID 1181 (1495)
Q Consensus 1103 sp~~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~-~~~~~~~~~~~~ 1181 (1495)
..+.. .-+....|-.|+-|+.-.++..+..+.-.+.+......+.++...-...+-+.+.+-. +..-....|.++
T Consensus 246 ~~Lvr----v~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~ 321 (604)
T COG4178 246 YSLVR----VRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQIT 321 (604)
T ss_pred HHHHH----HHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcCh
Confidence 55443 3345667777887776666555555544444444333333333322222222221111 111123467888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC------CCCCCCccccCCCCCCCCCcceEEEeeeeE
Q 000452 1182 PAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCI------PSEPPLEIEESRPNHSWPSHGKIDLRDLQV 1255 (1495)
Q Consensus 1182 ~~~~gl~l~~~~~l~~~~~~~~~~~~~le~~~~sveRi~~~~~~------~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~ 1255 (1495)
-|-...+.+-..++...+.|++..+..+..-...+.|+.++.+. +.+.+.... .+-...-.....|.|+|+++
T Consensus 322 ~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~nl~l 400 (604)
T COG4178 322 FGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTG-RRIDFDDNADHGITLENLSL 400 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCccc-ccccccccccceeEEeeeeE
Confidence 88888888888888899999999999999999999999999741 222111100 00000000146899999999
Q ss_pred EeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCC
Q 000452 1256 RYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMF 1335 (1495)
Q Consensus 1256 ~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF 1335 (1495)
.-+++. ..|++++|+|+|||.+-|.|+||||||||+++|.|+.+--+|+|.+-. -+++-++||.|.+-
T Consensus 401 ~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p 468 (604)
T COG4178 401 RTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLP 468 (604)
T ss_pred ECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCC
Confidence 987665 689999999999999999999999999999999999999999988641 24589999999999
Q ss_pred CCcHHHhcC-CCC--CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCC
Q 000452 1336 EGTVRSNVD-PLE--EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEAT 1412 (1495)
Q Consensus 1336 ~GTIR~NLd-p~~--~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaT 1412 (1495)
.||+||-|. |.. +++|+|+.++|.+|+|.+.+.++.+--+ =..-||+||||||++||.||++||+++|||||
T Consensus 469 ~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEAT 543 (604)
T COG4178 469 QGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEAT 543 (604)
T ss_pred CccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecch
Confidence 999999995 554 3899999999999999999988744222 23469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeC
Q 000452 1413 ASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSH 1457 (1495)
Q Consensus 1413 sslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~ 1457 (1495)
|+||.+++..+.+.++++.+++|||.|+||.....-.++.+-+++
T Consensus 544 sALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 544 SALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred hccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 999999999999999999999999999999888777777776654
No 169
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=372.32 Aligned_cols=219 Identities=30% Similarity=0.438 Sum_probs=189.2
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCC--CCCHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDIS--LIGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~--~i~l~ 1319 (1495)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 4899999999964 3599999999999999999999999999999999999987 4999999999997 45666
Q ss_pred HHhcccEEEcccCcCCCC-cHHHhcCCC---CC--CC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 000452 1320 DLRTRLSIIPQDPVMFEG-TVRSNVDPL---EE--YT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~G-TIR~NLdp~---~~--~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1389 (1495)
.+|++++|+||+|.+|.+ |+++|+... .. .+ ++++.++++..++.+.+.. .......+||+||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~ 154 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKD-------RLNDYPSNLSGGQ 154 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhh-------hhccChhhCCHHH
Confidence 788999999999999976 999999631 11 11 2457788888887654322 1234456899999
Q ss_pred HHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhH
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1390 rQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1468 (1495)
|||++|||||+++|++|||||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRK 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988677999999999999865 99999999999999999999
Q ss_pred HhhcCC
Q 000452 1469 LLENKS 1474 (1495)
Q Consensus 1469 Ll~~~~ 1474 (1495)
+++++.
T Consensus 235 ~~~~~~ 240 (253)
T PRK14267 235 VFENPE 240 (253)
T ss_pred HHhCCC
Confidence 986543
No 170
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.5e-39 Score=386.71 Aligned_cols=217 Identities=25% Similarity=0.398 Sum_probs=191.6
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++|++++|.. ..+|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ +++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 5899999999964 4599999999999999999999999999999999999999999999999999887754 67899
Q ss_pred EEcccCcCCC-CcHHHhcCCC-C--CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 000452 1327 IIPQDPVMFE-GTVRSNVDPL-E--EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1398 (1495)
Q Consensus 1327 iIpQdp~LF~-GTIR~NLdp~-~--~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1398 (1495)
|+||++.+|. .|+++|+... . ..+ ++++.++++..+|.++....| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYP-----------GQLSGGQQQRVALARA 148 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999999996 5999999632 1 122 456788888888876655444 4789999999999999
Q ss_pred HccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCCC
Q 000452 1399 LLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKSS 1475 (1495)
Q Consensus 1399 LLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~s 1475 (1495)
|+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++++++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPAT 228 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCC
Confidence 9999999999999999999999999999988654 7899999999998765 999999999999999999999988766
Q ss_pred hHH
Q 000452 1476 SFS 1478 (1495)
Q Consensus 1476 ~f~ 1478 (1495)
.|.
T Consensus 229 ~~~ 231 (353)
T TIGR03265 229 PFV 231 (353)
T ss_pred HHH
Confidence 553
No 171
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=372.82 Aligned_cols=222 Identities=25% Similarity=0.427 Sum_probs=192.2
Q ss_pred CcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCC--C
Q 000452 1244 SHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISL--I 1316 (1495)
Q Consensus 1244 ~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i 1316 (1495)
+.+.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3568999999999964 3599999999999999999999999999999999999975 89999999999975 3
Q ss_pred CHHHHhcccEEEcccCcCCCCcHHHhcCCCC---CC--C----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCc
Q 000452 1317 GLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE---EY--T----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSM 1387 (1495)
Q Consensus 1317 ~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~---~~--s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~ 1387 (1495)
+...+|++++|+||+|.+|.+|+++|+.... .. + ++++.++++.+++.+.+.. .....+.+||+
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKD-------RLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCH
Confidence 4567889999999999999999999996311 11 1 3457888999988765432 12344568999
Q ss_pred hHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecCh
Q 000452 1388 GQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSP 1466 (1495)
Q Consensus 1388 GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp 1466 (1495)
|||||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999987667899999999999865 899999999999999999
Q ss_pred hHHhhcCC
Q 000452 1467 RKLLENKS 1474 (1495)
Q Consensus 1467 ~~Ll~~~~ 1474 (1495)
++++.++.
T Consensus 247 ~~~~~~~~ 254 (267)
T PRK14235 247 EKMFTNPD 254 (267)
T ss_pred HHHHhCCC
Confidence 99986543
No 172
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.3e-39 Score=371.22 Aligned_cols=211 Identities=29% Similarity=0.414 Sum_probs=183.0
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCH---HHHhcc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL---HDLRTR 1324 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l---~~LR~~ 1324 (1495)
|+++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPNG-KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCCC-cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 6899999999623 459999999999999999999999999999999999999999999999999987654 457889
Q ss_pred cEEEcccCcCCC-CcHHHhcCCCC---------------CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 000452 1325 LSIIPQDPVMFE-GTVRSNVDPLE---------------EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1388 (1495)
Q Consensus 1325 isiIpQdp~LF~-GTIR~NLdp~~---------------~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~G 1388 (1495)
++|+||+|.+|. .|+++|+.... ...++++.++++.+++.+... ....+||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG 149 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAY-----------QRADQLSGG 149 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHH
Confidence 999999999886 59999995210 112345777788887754432 234579999
Q ss_pred HHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecC
Q 000452 1389 QRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDS 1465 (1495)
Q Consensus 1389 QrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gs 1465 (1495)
||||++|||||+++|+||||||||++||+++...+.+.|++..+ ++|+|+|+|+++.+.+ ||+|++|++|++++.|+
T Consensus 150 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 229 (243)
T TIGR02315 150 QQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGA 229 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCC
Confidence 99999999999999999999999999999999999999998743 7899999999999865 99999999999999999
Q ss_pred hhHHh
Q 000452 1466 PRKLL 1470 (1495)
Q Consensus 1466 p~~Ll 1470 (1495)
++++.
T Consensus 230 ~~~~~ 234 (243)
T TIGR02315 230 PSELD 234 (243)
T ss_pred HHHhC
Confidence 99874
No 173
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-39 Score=378.49 Aligned_cols=214 Identities=27% Similarity=0.375 Sum_probs=185.4
Q ss_pred EEEeeeeEEeCCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCC----CCHHH
Q 000452 1248 IDLRDLQVRYAPHM---PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL----IGLHD 1320 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~---~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~----i~l~~ 1320 (1495)
|+++||+++|+++. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997543 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhcccEEEcccC--cCCCCcHHHhcCCCC---CCCH----HHHHHHHHHcCCcH-HHHhccCCcccccccCCCCCCchHH
Q 000452 1321 LRTRLSIIPQDP--VMFEGTVRSNVDPLE---EYTD----EQIWEALDKCQLGD-EVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1321 LR~~isiIpQdp--~LF~GTIR~NLdp~~---~~sd----~ei~~aL~~~~L~~-~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
+|++++|++|+| .+|.+|+.+|+.... ..+. +++.++++.+++.+ +.. ....+||+|||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWE-----------KSPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhcc-----------CCcccCCHHHH
Confidence 899999999998 799999999996321 1232 34677788888753 322 23457999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhH
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~ 1468 (1495)
||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+. .||||++|++|++++.|+|++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998764 4789999999999885 599999999999999999999
Q ss_pred Hhhc
Q 000452 1469 LLEN 1472 (1495)
Q Consensus 1469 Ll~~ 1472 (1495)
+.++
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 8753
No 174
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-39 Score=378.40 Aligned_cols=216 Identities=25% Similarity=0.387 Sum_probs=184.4
Q ss_pred eEEEeeeeEEeCCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCC----CHH
Q 000452 1247 KIDLRDLQVRYAPHM---PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI----GLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~---~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~ 1319 (1495)
.|+++||+++|+.+. +++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 389999999996432 3699999999999999999999999999999999999999999999999999754 346
Q ss_pred HHhcccEEEcccC--cCCCCcHHHhcCCCC---CCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 000452 1320 DLRTRLSIIPQDP--VMFEGTVRSNVDPLE---EYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1320 ~LR~~isiIpQdp--~LF~GTIR~NLdp~~---~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
.+|++|+|+||+| .+|+.|+++|+.... ..+. +++.++++.+++... .....+.+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq~ 151 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRD----------VMSQSPFQMSGGQM 151 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHHH
Confidence 7899999999998 688899999996321 2333 334556666665411 12234568999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChh
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPR 1467 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~ 1467 (1495)
||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+. .||||++|++|++++.|+|+
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~ 231 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPK 231 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999999864 4799999999999885 59999999999999999999
Q ss_pred HHhhc
Q 000452 1468 KLLEN 1472 (1495)
Q Consensus 1468 ~Ll~~ 1472 (1495)
+++++
T Consensus 232 ~~~~~ 236 (286)
T PRK13646 232 ELFKD 236 (286)
T ss_pred HHHhC
Confidence 98764
No 175
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-39 Score=369.71 Aligned_cols=222 Identities=32% Similarity=0.482 Sum_probs=192.1
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCCCCHHHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLIGLHDL 1321 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i~l~~L 1321 (1495)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999964 3599999999999999999999999999999999999974 69999999999998888889
Q ss_pred hcccEEEcccCcCC-CCcHHHhcCCC---CC------CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1322 RTRLSIIPQDPVMF-EGTVRSNVDPL---EE------YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1322 R~~isiIpQdp~LF-~GTIR~NLdp~---~~------~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
|++++|+||+|.+| +.|+++|+... .. ..++++.++++.+++.+.+. ..+|.. ..+|||||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~----~~~LSgG~~q 153 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK---DRLDAP----AGKLSGGQQQ 153 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh---hhhcCC----cccCCHHHHH
Confidence 99999999999755 67999999631 11 11356788999999865432 123333 4579999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++|||||+++|+||+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+. .||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 99999999999999999999999999999999999998777899999999999986 59999999999999999999998
Q ss_pred hcCCChH
Q 000452 1471 ENKSSSF 1477 (1495)
Q Consensus 1471 ~~~~s~f 1477 (1495)
+++...+
T Consensus 234 ~~~~~~~ 240 (250)
T PRK14247 234 TNPRHEL 240 (250)
T ss_pred cCCccHH
Confidence 7654334
No 176
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-39 Score=374.17 Aligned_cols=215 Identities=28% Similarity=0.430 Sum_probs=189.1
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++|++++|+.+.+++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 59999999999744456999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcccC--cCCCCcHHHhcCCC---CCCCHH----HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1327 IIPQDP--VMFEGTVRSNVDPL---EEYTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1327 iIpQdp--~LF~GTIR~NLdp~---~~~sd~----ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
|+||+| .++..|+++|+... ...+++ .+.+++++.++.+...+. ..+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lar 155 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKE-----------PQNLSGGQKQRVAIAS 155 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------cccCCHHHHHHHHHHH
Confidence 999998 45677999999642 123333 356677888876655443 3589999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
||+++|++|+|||||++||..+...+.+.|++..+ ++|+|+++|+++.+..||+|++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 156 VLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998753 4899999999999888999999999999999999998764
No 177
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-39 Score=376.87 Aligned_cols=214 Identities=29% Similarity=0.434 Sum_probs=187.1
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCC--CCCHHHHhcc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDIS--LIGLHDLRTR 1324 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~--~i~l~~LR~~ 1324 (1495)
.|+++|++++|+.+ .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+. ..+..++|++
T Consensus 5 ~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 59999999999633 45999999999999999999999999999999999999999999999999984 3456778999
Q ss_pred cEEEcccC--cCCCCcHHHhcCCC---CCCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHH
Q 000452 1325 LSIIPQDP--VMFEGTVRSNVDPL---EEYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCL 1395 (1495)
Q Consensus 1325 isiIpQdp--~LF~GTIR~NLdp~---~~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~L 1395 (1495)
++|+||+| .+|+.|+++|+... ...+. +++.++++.+++.+... ....+||+|||||++|
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LS~G~~qrl~l 152 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKD-----------KPTHCLSFGQKKRVAI 152 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhh-----------CCcccCCHHHHHHHHH
Confidence 99999998 57899999999632 12232 34677788888865432 2356899999999999
Q ss_pred HHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1396 GRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1396 ARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
||||+.+|+||||||||++||+++...+.+.|++..+ ++|||+++|+++.+. .||||++|++|++++.|+++++++.
T Consensus 153 araL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 153 AGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999988764 789999999999987 5999999999999999999998753
No 178
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-39 Score=363.80 Aligned_cols=202 Identities=25% Similarity=0.386 Sum_probs=176.0
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ..+++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEEE
Confidence 478999999964 45999999999999999999999999999999999999999999999999998654 35778999
Q ss_pred EcccCcCCC-CcHHHhcCCC-C--CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFE-GTVRSNVDPL-E--EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~-GTIR~NLdp~-~--~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||+|.+|. .|+++|+... . ..+ ++++.++++.+++.+...+.| .+||||||||++|||||
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~al 145 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYP-----------HELSGGQQQRVALARAL 145 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHHHHHHHH
Confidence 999999886 5999999632 1 112 345778888888876554433 47999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEec
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1464 (1495)
+++|++|||||||++||+++...+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999864 37899999999998765 9999999999998865
No 179
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-39 Score=366.76 Aligned_cols=208 Identities=24% Similarity=0.330 Sum_probs=181.5
Q ss_pred eEEEeeeeEEeCCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHH---H
Q 000452 1247 KIDLRDLQVRYAPHM--PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---L 1321 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~--~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---L 1321 (1495)
.++++||+++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+..++.++ +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997532 46999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cccEEEcccCcCCCC-cHHHhcCC---CCCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 000452 1322 R-TRLSIIPQDPVMFEG-TVRSNVDP---LEEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1322 R-~~isiIpQdp~LF~G-TIR~NLdp---~~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
| ++++|+||+|.+|.+ |+++|+.. +...+ ++++.++++.+++.+...+. ..+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHR-----------PSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHH
Confidence 3 679999999999876 99999863 11222 34577888888876554332 35799999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhccCEEEEEeCcEEEEecC
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 1465 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gs 1465 (1495)
++||||++.+|+||||||||++||+++...+.+.|++.. +++|||+|+|+++.+..+|++++|++|++++.++
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999864 4799999999999999999999999999998775
No 180
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=340.77 Aligned_cols=469 Identities=21% Similarity=0.294 Sum_probs=337.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccccchhHHhcchhHHHhhhHHHHHHHH
Q 000452 970 LIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFA 1049 (1495)
Q Consensus 970 ~~~y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~ll~~ll~ap~~ffd~tp~G~ilnR~s~D~~~vd~~l~~~l~~~~ 1049 (1495)
+..|.++.....+...+.......+|.+.-.+++.++.++++.+|+.-+++-..+|++.++++|+..|... ...+..+.
T Consensus 51 l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~-~s~lp~~~ 129 (546)
T COG4615 51 LPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFA-FSRLPELV 129 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeeh-HhhhHHHH
Confidence 33444444444445556667778889999999999999999999999999999999999999999999833 33455678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhcchHHHHhhccHHHHH
Q 000452 1050 FSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFI 1129 (1495)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~~~~v~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~sp~~~~~~Etl~G~~tIRaf~~e~~f~ 1129 (1495)
++.+..+++++.+++.+|+++.+.+..+++.++.+..-++..-+-.+...++...+.++++..++|.+..+..+...+..
T Consensus 130 qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~ 209 (546)
T COG4615 130 QAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYV 209 (546)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHH
Confidence 88888999999999999998877666555544433322222222222333456678999999999999988876544433
Q ss_pred HHHHH------HHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH---HHHHHHHH
Q 000452 1130 DTNME------LMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLISIPKGFIDPAIAGLAVTYG---LTLNNLQA 1200 (1495)
Q Consensus 1130 ~~~~~------~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~~~~~~~~~~~~~~gl~l~~~---~~l~~~~~ 1200 (1495)
....- .-+...+..........|-+..+-.+..+++ .+. ...+.-+.. .+.+++ +.+...+.
T Consensus 210 h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf-----~la-l~~~w~st~---~a~tivlvlLflr~pL~ 280 (546)
T COG4615 210 HNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVF-----WLA-LSLGWASTN---VAATIVLVLLFLRTPLL 280 (546)
T ss_pred HhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHH-----HHH-Hhhccchhh---HHHHHHHHHHHHhhHHH
Confidence 22211 1111112222222344454433221111110 011 111111111 233333 33455666
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhcCCCCCCCccccCCCCCCCCCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEE
Q 000452 1201 MLIWLACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGI 1280 (1495)
Q Consensus 1201 ~~~~~~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgI 1280 (1495)
.++...-.+-...++..||.++...|..+. .....+.++| ..||++||.|.|.++. -=+..||++|+.||.|=|
T Consensus 281 s~vgilP~l~~AqvA~~kiakle~~~~~a~--~~~~q~~p~~---~~lelrnvrfay~~~~-FhvgPiNl~ikrGelvFl 354 (546)
T COG4615 281 SAVGILPTLLTAQVAFNKIAKLELAPYKAD--FPRPQAFPDW---KTLELRNVRFAYQDNA-FHVGPINLTIKRGELVFL 354 (546)
T ss_pred HHHhhhhHHHHHHHHHHHHHHhhcCCcccc--CCCCCcCCcc---cceeeeeeeeccCccc-ceecceeeEEecCcEEEE
Confidence 777777778888899999998876332221 1222233345 4699999999998764 347789999999999999
Q ss_pred EcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHH
Q 000452 1281 VGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDK 1360 (1495)
Q Consensus 1281 VGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~ 1360 (1495)
+|.+||||||++++|.|+|.|++|+|++||.+++.-++++.|+-++-|.-|-+||+.++ .|-+..+.+.|..-|++
T Consensus 355 iG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll----~~e~~as~q~i~~~Lqr 430 (546)
T COG4615 355 IGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL----GPEGKASPQLIEKWLQR 430 (546)
T ss_pred ECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh----CCccCCChHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998664 34444788888777877
Q ss_pred cCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEE
Q 000452 1361 CQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVIT 1438 (1495)
Q Consensus 1361 ~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~ 1438 (1495)
..+.....-..+.+ + ...||-|||.|+++--|++-+.+|+++||=-|.-||.=.+...+.+-... .|+|||.
T Consensus 431 Lel~~ktsl~d~~f-s-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~a 504 (546)
T COG4615 431 LELAHKTSLNDGRF-S-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFA 504 (546)
T ss_pred HHHhhhhcccCCcc-c-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEE
Confidence 77655443222211 1 13689999999999999999999999999999999999988777664433 4899999
Q ss_pred EecCchhhhccCEEEEEeCcEEEEec
Q 000452 1439 IAHRITSVIDSDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1439 IAHRl~ti~~~DrIlVL~~G~ivE~g 1464 (1495)
|+|+-+-...+||++.|++|+++|.-
T Consensus 505 IsHDd~YF~~ADrll~~~~G~~~e~t 530 (546)
T COG4615 505 ISHDDHYFIHADRLLEMRNGQLSELT 530 (546)
T ss_pred EecCchhhhhHHHHHHHhcCceeecc
Confidence 99999999999999999999999863
No 181
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.1e-39 Score=366.27 Aligned_cols=211 Identities=25% Similarity=0.366 Sum_probs=182.8
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.+. +++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 689999999963 35999999999999999999999999999999999999999999999999998776544 458999
Q ss_pred EcccCcC-CCCcHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVM-FEGTVRSNVDPLE---EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~L-F~GTIR~NLdp~~---~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||+|.+ +..|+++|+.... ..+ ++++.+.++..++.+. ......+||+|||||++||||+
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrl~laral 147 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAER-----------ADDKVRELNGGHRRRVEIARAL 147 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hcCChhhCCHHHHHHHHHHHHH
Confidence 9999987 5679999996421 122 2345666776666433 2334457999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
+++|+||||||||++||+.+...+.+.|++.. .++|+|+++|+++.+..||+|++|++|++++.|+++++.++
T Consensus 148 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 148 LHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999999875 37899999999999988999999999999999999999864
No 182
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.8e-39 Score=351.99 Aligned_cols=178 Identities=32% Similarity=0.543 Sum_probs=167.1
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+...+++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999976444699999999999999999999999999999999999999999999999998776 6678899999
Q ss_pred EcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEE
Q 000452 1328 IPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILM 1407 (1495)
Q Consensus 1328 IpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILi 1407 (1495)
+||+|.+|++|+++|+ ..+||+|||||++||||++++|++||
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 45799999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcEEEEec
Q 000452 1408 LDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1408 LDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~g 1464 (1495)
|||||++||..+...+.+.|++..+++|+|+++|+++.+..||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999887789999999999999899999999999999865
No 183
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.4e-39 Score=364.03 Aligned_cols=212 Identities=23% Similarity=0.419 Sum_probs=179.3
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHH-hcccE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL-RTRLS 1326 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~is 1326 (1495)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK--SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC--eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 578999999964 359999999999999999999999999999999999999999999999999988877664 67899
Q ss_pred EEcccCcCCCC-cHHHhcCCCCC-CC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHc
Q 000452 1327 IIPQDPVMFEG-TVRSNVDPLEE-YT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLL 1400 (1495)
Q Consensus 1327 iIpQdp~LF~G-TIR~NLdp~~~-~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALL 1400 (1495)
|+||+|.+|.+ |+++|+..... +. .+++.++++..+ +++........+||+|||||++||||++
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~laral~ 148 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP----------RLKERRKQLAGTLSGGEQQMLAIARALM 148 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH----------hhhhhhhCchhhCCHHHHHHHHHHHHHh
Confidence 99999999987 99999964221 11 122333444431 1222223445679999999999999999
Q ss_pred cCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1401 KRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1401 r~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
++|++|+|||||++||.++...+.+.|++.. .++|+|+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 149 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 149 SRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred cCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999998865 47899999999998765 99999999999999999988764
No 184
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.8e-39 Score=383.28 Aligned_cols=216 Identities=25% Similarity=0.402 Sum_probs=189.8
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+...+. .|++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 4889999999964 359999999999999999999999999999999999999999999999999987653 467899
Q ss_pred EEcccCcCCCC-cHHHhcCCC-C------CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 000452 1327 IIPQDPVMFEG-TVRSNVDPL-E------EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1327 iIpQdp~LF~G-TIR~NLdp~-~------~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
|+||++.+|.. |+++|+... . ..+ ++++.++++.+++.+...+.| ..||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----------AQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 99999999975 999999732 1 122 346778899998876655443 468999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
|||||+++|++|+|||||++||..+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++++
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998764 6899999999998765 99999999999999999999998
Q ss_pred cCCChH
Q 000452 1472 NKSSSF 1477 (1495)
Q Consensus 1472 ~~~s~f 1477 (1495)
++...|
T Consensus 227 ~p~~~~ 232 (353)
T PRK10851 227 EPATRF 232 (353)
T ss_pred CccchH
Confidence 765444
No 185
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-39 Score=374.33 Aligned_cols=217 Identities=26% Similarity=0.394 Sum_probs=187.2
Q ss_pred EEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHH----hcc
Q 000452 1249 DLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL----RTR 1324 (1495)
Q Consensus 1249 ~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L----R~~ 1324 (1495)
.++|++.+|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 46688888864 359999999999999999999999999999999999999999999999999988775543 468
Q ss_pred cEEEcccCcCCC-CcHHHhcCCC---CCC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1325 LSIIPQDPVMFE-GTVRSNVDPL---EEY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1325 isiIpQdp~LF~-GTIR~NLdp~---~~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
++|+||+|.+|. .|+++|+... ... .++++.++++.+++.+.+...| .+||+|||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 999999999885 5999999631 111 2346788899999877665554 36899999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcC
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENK 1473 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1473 (1495)
|||+++|+||||||||++||+.+...+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 252 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNP 252 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999998743 7999999999998765 9999999999999999999998765
Q ss_pred CChHH
Q 000452 1474 SSSFS 1478 (1495)
Q Consensus 1474 ~s~f~ 1478 (1495)
...|.
T Consensus 253 ~~~~~ 257 (269)
T cd03294 253 ANDYV 257 (269)
T ss_pred CcHHH
Confidence 54443
No 186
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-39 Score=370.67 Aligned_cols=219 Identities=27% Similarity=0.472 Sum_probs=191.4
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEEcCEeCCC--CCH
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IGL 1318 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l 1318 (1495)
..|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 36999999999953 459999999999999999999999999999999999997 579999999999864 346
Q ss_pred HHHhcccEEEcccCcCCCCcHHHhcCCC----CCC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 000452 1319 HDLRTRLSIIPQDPVMFEGTVRSNVDPL----EEY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1319 ~~LR~~isiIpQdp~LF~GTIR~NLdp~----~~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
..+|+.++|+||+|.+|.+|+++|+... +.. .++++.++++.+++.+.+.. .....+..||+|||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~ 169 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKD-------DLHKSALTLSGGQQ 169 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhh-------hhcCCcccCCHHHH
Confidence 6789999999999999999999999632 111 23557788899988755432 23455678999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHH
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1469 (1495)
||++||||++++|++|+|||||++||+.+...+.+.|++..++.|||+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 170 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14237 170 QRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNI 249 (267)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778999999999998865 999999999999999999999
Q ss_pred hhcC
Q 000452 1470 LENK 1473 (1495)
Q Consensus 1470 l~~~ 1473 (1495)
.+.+
T Consensus 250 ~~~~ 253 (267)
T PRK14237 250 FTNP 253 (267)
T ss_pred hcCC
Confidence 8654
No 187
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=369.36 Aligned_cols=219 Identities=27% Similarity=0.458 Sum_probs=189.2
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc---ccC--CccEEEEcCEeCCCC--CHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRI---VEP--AAGQILIDGIDISLI--GLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl---~ep--~~G~I~IDG~dI~~i--~l~ 1319 (1495)
.|+++|++++|+. ..+|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++.+. +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 5899999999964 3599999999999999999999999999999999997 344 589999999999764 346
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCC-C--C-----CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPL-E--E-----YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~-~--~-----~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
.+|++++|+||+|.+|.+|+++|+... . . ..+++++++++.+++.+.+.. .....+.+||+||||
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 153 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKD-------KLKESAFALSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhh-------hhhCCcccCCHHHHH
Confidence 778899999999999999999999631 1 1 123467888888888655432 123456689999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|++++++
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999998778999999999999865 9999999999999999999998
Q ss_pred hcCC
Q 000452 1471 ENKS 1474 (1495)
Q Consensus 1471 ~~~~ 1474 (1495)
+++.
T Consensus 234 ~~~~ 237 (250)
T PRK14245 234 TNPE 237 (250)
T ss_pred cCCC
Confidence 7654
No 188
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-39 Score=371.62 Aligned_cols=221 Identities=25% Similarity=0.436 Sum_probs=190.2
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEEcCEeCCCCC--HHH
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISLIG--LHD 1320 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~i~--l~~ 1320 (1495)
-+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|++. |++|+|.++|.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999963 469999999999999999999999999999999999986 47999999999987653 346
Q ss_pred HhcccEEEcccCcCCCCcHHHhcCCC---CC------CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1321 LRTRLSIIPQDPVMFEGTVRSNVDPL---EE------YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1321 LR~~isiIpQdp~LF~GTIR~NLdp~---~~------~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
+|++++|+||+|.+|.+|+++|+... .. ..++++.++++..++.+.+. +.+...+.+||+||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~q 156 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQQ 156 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHHH
Confidence 78999999999999999999998631 11 12356778889988865432 1223445689999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++||||++++|+||||||||++||..+...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|++++++
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999875 9999999999999999999998
Q ss_pred hcCCChH
Q 000452 1471 ENKSSSF 1477 (1495)
Q Consensus 1471 ~~~~s~f 1477 (1495)
+++...+
T Consensus 237 ~~~~~~~ 243 (251)
T PRK14244 237 KNPQSSK 243 (251)
T ss_pred cCCCChH
Confidence 7655444
No 189
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-39 Score=370.13 Aligned_cols=222 Identities=27% Similarity=0.435 Sum_probs=189.3
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEEcCEeCCC--CCHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1319 (1495)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999964 359999999999999999999999999999999999997 479999999999864 3456
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCCC---CC-----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPLE---EY-----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~~---~~-----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
.+|+.++|+||+|.+|++|+++|+.... .. .++++.++++.+++++.+. ..++ ....+||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~----~~~~~LS~Gq~q 154 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETK---DNLD----RNAQAFSGGQQQ 154 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchH---HHhc----cChhhCCHHHHH
Confidence 6788999999999999999999996321 11 2345677888888753221 1222 345689999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++||||++++|++|||||||++||+++...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988777999999999999876 9999999999999999999998
Q ss_pred hcCCChH
Q 000452 1471 ENKSSSF 1477 (1495)
Q Consensus 1471 ~~~~s~f 1477 (1495)
..+.-.|
T Consensus 235 ~~~~~~~ 241 (251)
T PRK14251 235 IAPKKQI 241 (251)
T ss_pred hCCCCHH
Confidence 6544333
No 190
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-39 Score=373.61 Aligned_cols=216 Identities=27% Similarity=0.415 Sum_probs=192.1
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCc---cEEEEcCEeCCCCCHHHHh
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAA---GQILIDGIDISLIGLHDLR 1322 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~---G~I~IDG~dI~~i~l~~LR 1322 (1495)
+.|+++|++++|++...++|+|+||+|++||.+||+|++|||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999996543459999999999999999999999999999999999999987 8999999999888878889
Q ss_pred cccEEEcccC--cCCCCcHHHhcCCC---CCCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 000452 1323 TRLSIIPQDP--VMFEGTVRSNVDPL---EEYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1393 (1495)
Q Consensus 1323 ~~isiIpQdp--~LF~GTIR~NLdp~---~~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl 1393 (1495)
++++|+||+| .+++.|+++||... ...++ +++.++++.+++.+.....| .+||+|||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHH
Confidence 9999999999 46788999999732 12333 34778899999877655544 47999999999
Q ss_pred HHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhh
Q 000452 1394 CLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1394 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
+|||||+.+|++|||||||++||..+...+.+.|++..+ ++|||+++|+++.+..||+|++|++|++++.|+++++++
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999998753 789999999999998899999999999999999999875
Q ss_pred c
Q 000452 1472 N 1472 (1495)
Q Consensus 1472 ~ 1472 (1495)
+
T Consensus 233 ~ 233 (282)
T PRK13640 233 K 233 (282)
T ss_pred C
Confidence 3
No 191
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5e-39 Score=379.45 Aligned_cols=223 Identities=22% Similarity=0.349 Sum_probs=189.5
Q ss_pred eEEEeeeeEEeCCC-----------CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCC
Q 000452 1247 KIDLRDLQVRYAPH-----------MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL 1315 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~-----------~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~ 1315 (1495)
-++++|++++|... ...+++||||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 59999999999631 2469999999999999999999999999999999999999999999999999998
Q ss_pred CCHHH---HhcccEEEcccC--cCC-CCcHHHhcCC----C-CCCCH----HHHHHHHHHcCCcHHHHhccCCccccccc
Q 000452 1316 IGLHD---LRTRLSIIPQDP--VMF-EGTVRSNVDP----L-EEYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTE 1380 (1495)
Q Consensus 1316 i~l~~---LR~~isiIpQdp--~LF-~GTIR~NLdp----~-~~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e 1380 (1495)
++.++ +|++++||||+| .|| ..||++|+.. . ...+. +.+.++++.+++.+.+ + ..
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~------~----~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNL------I----NR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHH------h----cC
Confidence 87544 678999999999 577 4699999851 1 12343 3456778888874321 1 12
Q ss_pred CCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeC
Q 000452 1381 NGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSH 1457 (1495)
Q Consensus 1381 ~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~ 1457 (1495)
....||||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 3457999999999999999999999999999999999999999999987643 7899999999999976 999999999
Q ss_pred cEEEEecChhHHhhcCCChHHH
Q 000452 1458 GLIEEYDSPRKLLENKSSSFSQ 1479 (1495)
Q Consensus 1458 G~ivE~gsp~~Ll~~~~s~f~~ 1479 (1495)
|+|+|.|+++++++++...|.+
T Consensus 238 G~ive~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHH
Confidence 9999999999999876555554
No 192
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-40 Score=342.89 Aligned_cols=205 Identities=30% Similarity=0.443 Sum_probs=177.7
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCC-----cEEEEcCe--------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS-----GTLKLCGT-------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~-----G~v~~~g~-------- 682 (1495)
..++++|+++.|. ++.+|+|||++|++++++|++||+||||||||+++....+..+ |+|.++|+
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 4689999999996 4679999999999999999999999999999999999987765 89999884
Q ss_pred -------EEEEccCCcccCccHHHHHhcCCCC---C----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 683 -------KAYVAQSPWIQSGKIEDNILFGKEM---D----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 683 -------~ayv~Q~~~l~~~ti~enI~fg~~~---~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
+|.|+|.|.-|+.||+|||.+|... . ++..++.++..+|-+..+ | .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVK-----D--rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVK-----D--RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhH-----H--HhhCCccCCChhHH
Confidence 5999999999999999999999542 1 234555566666644332 1 24578889999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 827 (1495)
||++||||+.-+|+|+|||||||||||.+..+| ++++..+.++-|+|+|||+++...+ +|+...+.+|++++.|+.++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kI-EeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKI-EELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHH-HHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 999999999999999999999999999988888 6788888888999999999999876 99999999999999999999
Q ss_pred HHhc
Q 000452 828 VINS 831 (1495)
Q Consensus 828 l~~~ 831 (1495)
+..+
T Consensus 235 iF~~ 238 (253)
T COG1117 235 IFTN 238 (253)
T ss_pred hhcC
Confidence 8765
No 193
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=5.1e-39 Score=369.14 Aligned_cols=217 Identities=29% Similarity=0.425 Sum_probs=188.2
Q ss_pred cceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCC-------
Q 000452 1245 HGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG------- 1317 (1495)
Q Consensus 1245 ~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~------- 1317 (1495)
.+.++++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+.
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999964 35999999999999999999999999999999999999999999999999986531
Q ss_pred ------HHHHhcccEEEcccCcCCCC-cHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCC
Q 000452 1318 ------LHDLRTRLSIIPQDPVMFEG-TVRSNVDPL----EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENG 1382 (1495)
Q Consensus 1318 ------l~~LR~~isiIpQdp~LF~G-TIR~NLdp~----~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G 1382 (1495)
...+|++++|+||+|.+|.+ |+++|+... .... ++++.+++++.++.+... ....
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----------~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQ----------GKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhh----------hCCc
Confidence 35678899999999999975 999999631 1112 345778888888865531 2234
Q ss_pred CCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEE
Q 000452 1383 ENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLI 1460 (1495)
Q Consensus 1383 ~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~i 1460 (1495)
..||+|||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+.. ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 6799999999999999999999999999999999999999999998864 37999999999999986 999999999999
Q ss_pred EEecChhHHhhcC
Q 000452 1461 EEYDSPRKLLENK 1473 (1495)
Q Consensus 1461 vE~gsp~~Ll~~~ 1473 (1495)
++.|+++++++.+
T Consensus 231 ~~~~~~~~~~~~~ 243 (257)
T PRK10619 231 EEEGAPEQLFGNP 243 (257)
T ss_pred EEeCCHHHhhhCc
Confidence 9999999998654
No 194
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-39 Score=378.22 Aligned_cols=224 Identities=24% Similarity=0.379 Sum_probs=190.0
Q ss_pred eEEEeeeeEEeCCC--------CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCH
Q 000452 1247 KIDLRDLQVRYAPH--------MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL 1318 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~--------~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l 1318 (1495)
-|+++|++++|+.. ...+|+||||+|++||++||||+||||||||+++|.|+++|++|+|.+||.|+.+++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 48999999999631 2469999999999999999999999999999999999999999999999999998874
Q ss_pred H---HHhcccEEEcccCc--CCCC-cHHHhcC-CC---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCC
Q 000452 1319 H---DLRTRLSIIPQDPV--MFEG-TVRSNVD-PL---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGEN 1384 (1495)
Q Consensus 1319 ~---~LR~~isiIpQdp~--LF~G-TIR~NLd-p~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~n 1384 (1495)
. .+|+++++|||||. |+.. ||.+|+. +. ...+ .+++.++|+++++.+. .++.. ...
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~------~~~~~----p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPE------HYDRY----PHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChH------HhcCC----Ccc
Confidence 3 57889999999993 5554 8988874 21 1122 3457888999988632 22322 357
Q ss_pred CCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEE
Q 000452 1385 WSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIE 1461 (1495)
Q Consensus 1385 LS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~iv 1461 (1495)
||||||||++|||||+.+|+|||+||||++||..+...|.+.|++..+ ++|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999988653 7899999999999975 9999999999999
Q ss_pred EecChhHHhhcCCChHHHH
Q 000452 1462 EYDSPRKLLENKSSSFSQL 1480 (1495)
Q Consensus 1462 E~gsp~~Ll~~~~s~f~~l 1480 (1495)
|.|+++++++++...|.+.
T Consensus 235 e~g~~~~~~~~p~hpyt~~ 253 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQA 253 (327)
T ss_pred EECCHHHHhcCCCCHHHHH
Confidence 9999999998765555543
No 195
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-39 Score=373.31 Aligned_cols=202 Identities=32% Similarity=0.435 Sum_probs=178.0
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EEE
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 685 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~ay 685 (1495)
.|+++|++++|.. ..+++|+||+|++||+++++|||||||||||++|+|+.+|++|+|.++|+ +|+
T Consensus 3 ~i~l~~v~K~yg~---~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iam 79 (338)
T COG3839 3 ELELKNVRKSFGS---FEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAM 79 (338)
T ss_pred EEEEeeeEEEcCC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEE
Confidence 5899999999962 12999999999999999999999999999999999999999999999984 599
Q ss_pred EccCCcccC-ccHHHHHhcCCCCC-------HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 686 VAQSPWIQS-GKIEDNILFGKEMD-------RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 686 v~Q~~~l~~-~ti~enI~fg~~~~-------~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
|+|+.-+++ .||+|||.||.... +++.+++.+.+++++.++ +++.+||||||||||||||+
T Consensus 80 VFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~-----------r~P~~LSGGQrQRVAlaRAl 148 (338)
T COG3839 80 VFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLN-----------RKPLQLSGGQRQRVALARAL 148 (338)
T ss_pred EeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHh-----------cCcccCChhhHHHHHHHHHH
Confidence 999998875 59999999997542 467778888888887775 67789999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHHHHhcC
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
.++|+++|||||+|+||++....+-.++.+... -+.|+|+||||..++- .+|+|.+|++|+|.+.|++.|+.+..
T Consensus 149 Vr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 149 VRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred hcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 999999999999999999998888766544222 2789999999987765 59999999999999999999998654
No 196
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-39 Score=370.23 Aligned_cols=222 Identities=26% Similarity=0.416 Sum_probs=189.9
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCCC--CHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLI--GLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l~ 1319 (1495)
.|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 12 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 12 QIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 6999999999963 3599999999999999999999999999999999999985 799999999998753 345
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPL---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
.+|++++|+||+|.+|..|+++|+... ...+ ++++.++++.+++.+.+. ..++ ....+||+|||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~----~~~~~LSgG~~qr 162 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS---DRLK----SPALSLSGGQQQR 162 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh---hhhc----CChhhCCHHHHHH
Confidence 678899999999999999999999631 1222 234677888888754321 1233 3456799999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
++|||||+++|+||+|||||++||.++...+.+.|++..+++|||+|+|+++.+.+ ||+|++|++|++++.|+|+++.+
T Consensus 163 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 163 LCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999987668999999999999865 99999999999999999999987
Q ss_pred cCCChH
Q 000452 1472 NKSSSF 1477 (1495)
Q Consensus 1472 ~~~s~f 1477 (1495)
++...+
T Consensus 243 ~~~~~~ 248 (258)
T PRK14268 243 NPREKS 248 (258)
T ss_pred CCCCHH
Confidence 654433
No 197
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.9e-39 Score=363.65 Aligned_cols=202 Identities=29% Similarity=0.410 Sum_probs=175.5
Q ss_pred EEEeeeeEEeCCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHH----H
Q 000452 1248 IDLRDLQVRYAPHM--PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD----L 1321 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~--~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~----L 1321 (1495)
|+++||+++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999997531 46999999999999999999999999999999999999999999999999998876433 4
Q ss_pred hcccEEEcccCcCCCC-cHHHhcCCC---CCC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 000452 1322 RTRLSIIPQDPVMFEG-TVRSNVDPL---EEY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1393 (1495)
Q Consensus 1322 R~~isiIpQdp~LF~G-TIR~NLdp~---~~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl 1393 (1495)
|++++|+||+|.+|.+ |+++|+... ... .++++.++++..++.+...+. ..+||+|||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHY-----------PSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcC-----------hhhcCHHHHHHH
Confidence 6789999999999987 999999632 111 234677888888876554333 357999999999
Q ss_pred HHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhccCEEEEEeCcEE
Q 000452 1394 CLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGLI 1460 (1495)
Q Consensus 1394 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~i 1460 (1495)
+|||||+++|+||||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998754 7899999999999888999999999974
No 198
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.7e-39 Score=361.40 Aligned_cols=205 Identities=24% Similarity=0.385 Sum_probs=178.7
Q ss_pred EEEeeeeEEeCCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1248 IDLRDLQVRYAPHM--PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~--~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...++|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 68999999996532 269999999999999999999999999999999999999999999999999976 356788999
Q ss_pred EEEcccCcCCCC-cHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1326 SIIPQDPVMFEG-TVRSNVDPL---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLdp~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
+|+||+|.+|.+ |+++|+... ...+ ++++.++++..++.+...+ ...+||+|||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDR-----------RVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhh-----------hhhhcCHHHHHHHHHHH
Confidence 999999999986 999998521 1122 3467788888888655443 34579999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEec
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1464 (1495)
|++++|+||||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999998864 47899999999998865 9999999999998865
No 199
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-39 Score=367.33 Aligned_cols=223 Identities=25% Similarity=0.445 Sum_probs=191.3
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCCC--CHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLI--GLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l~ 1319 (1495)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999963 4599999999999999999999999999999999999984 899999999998753 345
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCC----CCC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPL----EEY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~----~~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
.+|++++|+||+|.+|..|+++|+... +.. .++++.++++..++.+.+.. .......+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq~q 153 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKS-------ELNKPGTRLSGGQQQ 153 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHH-------HHhCChhhcCHHHHH
Confidence 678899999999999999999999631 111 23456778888888654432 234456789999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++||||++++|+||+|||||++||..+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999999988778999999999998765 9999999999999999999998
Q ss_pred hcCCChHH
Q 000452 1471 ENKSSSFS 1478 (1495)
Q Consensus 1471 ~~~~s~f~ 1478 (1495)
+++...|.
T Consensus 234 ~~~~~~~~ 241 (250)
T PRK14262 234 ERPKNKLT 241 (250)
T ss_pred hCCCChHH
Confidence 65433344
No 200
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4.6e-39 Score=383.00 Aligned_cols=218 Identities=22% Similarity=0.399 Sum_probs=192.2
Q ss_pred cceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCc--cEEEEcCEeCCCCCHHHHh
Q 000452 1245 HGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAA--GQILIDGIDISLIGLHDLR 1322 (1495)
Q Consensus 1245 ~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~--G~I~IDG~dI~~i~l~~LR 1322 (1495)
.|.|+++||+++|.. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++ |+|.+||.++...+. .+
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 478999999999974 359999999999999999999999999999999999999999 999999999987665 35
Q ss_pred cccEEEcccCcCCCC-cHHHhcCC-CC--CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 000452 1323 TRLSIIPQDPVMFEG-TVRSNVDP-LE--EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1323 ~~isiIpQdp~LF~G-TIR~NLdp-~~--~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
+++++++|++.+|.. |+++|+.. .. ..+ ++++.++++.++|.+...+.| .+||||||||++
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHHH
Confidence 789999999999977 99999963 21 223 245777889988887766555 368999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC---CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS---DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~---~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|||||+++|++|+||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|+||++|++++.|+|+++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999987654 6899999999998765 9999999999999999999999
Q ss_pred hcCCChH
Q 000452 1471 ENKSSSF 1477 (1495)
Q Consensus 1471 ~~~~s~f 1477 (1495)
+++...|
T Consensus 228 ~~p~~~~ 234 (362)
T TIGR03258 228 DAPADGF 234 (362)
T ss_pred hCcCcHH
Confidence 8776555
No 201
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-39 Score=361.24 Aligned_cols=208 Identities=25% Similarity=0.375 Sum_probs=182.0
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .++|++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREP-REVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcCh-HHHhhcEEE
Confidence 578999999964 35999999999999999999999999999999999999999999999999987633 567889999
Q ss_pred EcccCcCCCC-cHHHhcCCC---CCC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFEG-TVRSNVDPL---EEY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLdp~---~~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||+|.+|.+ |+++|+... ... .++++.++++.+++.+...+.| ..||+|||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLV-----------KTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999999876 999999531 111 2446788899998876554433 46999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHH
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1469 (1495)
+.+|++|+|||||++||+++...+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999988653 6899999999999875 999999999999999998764
No 202
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-39 Score=375.88 Aligned_cols=203 Identities=33% Similarity=0.443 Sum_probs=179.3
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EE
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KA 684 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~a 684 (1495)
..++++|++++|. +.++++|+||+|++||+++++|||||||||||++|+|+..|++|+|.++|+ ++
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig 80 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIG 80 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccc
Confidence 4699999999996 468999999999999999999999999999999999999999999999995 48
Q ss_pred EEccCCccc-CccHHHHHhcCCCC----C-H---HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHH
Q 000452 685 YVAQSPWIQ-SGKIEDNILFGKEM----D-R---ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIAR 755 (1495)
Q Consensus 685 yv~Q~~~l~-~~ti~enI~fg~~~----~-~---~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 755 (1495)
+|+|+.-|| +.||+|||.||... . + +++++.++..+|.+.. .+++..|||||||||||||
T Consensus 81 ~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~-----------~R~p~qLSGGQqQRVALAR 149 (352)
T COG3842 81 MVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFA-----------DRKPHQLSGGQQQRVALAR 149 (352)
T ss_pred eeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhh-----------hhChhhhChHHHHHHHHHH
Confidence 999999887 56999999999762 2 2 3667777777776533 3788999999999999999
Q ss_pred HhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCc-cccCCEEEEEeCCEEEEecChHHHHhcC
Q 000452 756 ALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEF-LPAADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 756 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~-l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
||..+|+++|||||+||||.+.++++-.++..... .|.|.|+||||.+. +..+|+|.+|++|+|.+.|+++|+....
T Consensus 150 AL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 150 ALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999998777655443 38999999999987 5669999999999999999999998654
No 203
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-39 Score=367.00 Aligned_cols=219 Identities=28% Similarity=0.434 Sum_probs=188.2
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CccEEEEcCEeCCCC--CHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE--P---AAGQILIDGIDISLI--GLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e--p---~~G~I~IDG~dI~~i--~l~ 1319 (1495)
.++++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ | ++|+|.+||.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 5899999999964 359999999999999999999999999999999999953 6 499999999999753 345
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCC----CC----CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPL----EE----YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~----~~----~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
.+|++++|+||+|.+|+.|+++|+... +. ..++++.++++.+++.+.+.. .......+||+||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 155 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKD-------RLHDSALGLSGGQQQ 155 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHH-------HHhcCcccCCHHHHH
Confidence 678899999999999999999998621 11 123456778888887654432 223455689999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++|||||+++|+||||||||++||.++...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|++++++
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999998865 9999999999999999999998
Q ss_pred hcCC
Q 000452 1471 ENKS 1474 (1495)
Q Consensus 1471 ~~~~ 1474 (1495)
+++.
T Consensus 236 ~~~~ 239 (252)
T PRK14239 236 MNPK 239 (252)
T ss_pred hCCC
Confidence 7643
No 204
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-39 Score=366.91 Aligned_cols=222 Identities=25% Similarity=0.443 Sum_probs=192.7
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEEcCEeCCC--CCHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1319 (1495)
.++++||+++|++ .++|+|+||+|++||.+||+|++|||||||+++|+|+.+ |++|+|.+||.+++. .+..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 3789999999964 359999999999999999999999999999999999975 389999999999875 3467
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCC-C--C-CC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPL-E--E-YT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~-~--~-~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
++|++++|+||+|.+|.+|+++|+... . . .+ ++++.++++.+++.+.+... + ...+.+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~----~~~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK---L----DKSALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH---H----hCCcccCCHHHHH
Confidence 889999999999999999999999632 1 1 12 24567789999997765432 2 3456789999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|+||||||+++|+||+|||||++||..+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778999999999998876 8999999999999999999998
Q ss_pred hcCCChH
Q 000452 1471 ENKSSSF 1477 (1495)
Q Consensus 1471 ~~~~s~f 1477 (1495)
+.+...+
T Consensus 234 ~~~~~~~ 240 (250)
T PRK14266 234 INPKDKR 240 (250)
T ss_pred hCCCChH
Confidence 7655544
No 205
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=9.3e-39 Score=369.05 Aligned_cols=223 Identities=23% Similarity=0.353 Sum_probs=190.2
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHH---HHhc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH---DLRT 1323 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR~ 1323 (1495)
.|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5999999999963 3599999999999999999999999999999999999999999999999999877643 4578
Q ss_pred ccEEEcccCcCCCC-cHHHhcCC----CCCCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 000452 1324 RLSIIPQDPVMFEG-TVRSNVDP----LEEYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1324 ~isiIpQdp~LF~G-TIR~NLdp----~~~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
+++|+||++.+|.+ |+++|+.. ....+. +++.++++.+++.+..... ..+||||||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGq~qrv~ 153 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLM-----------PSELSGGMARRAA 153 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHHH
Confidence 89999999999987 99999962 111222 3466678888776543332 3479999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
|||||+++|++|||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+++++++
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998643 7899999999998876 99999999999999999999987
Q ss_pred cCCChHHHHHH
Q 000452 1472 NKSSSFSQLVA 1482 (1495)
Q Consensus 1472 ~~~s~f~~lv~ 1482 (1495)
+++.....++.
T Consensus 234 ~~~~~~~~~~~ 244 (269)
T PRK11831 234 NPDPRVRQFLD 244 (269)
T ss_pred CCcHHHHHHHH
Confidence 54444455544
No 206
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-39 Score=365.97 Aligned_cols=222 Identities=25% Similarity=0.455 Sum_probs=190.8
Q ss_pred cceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CccEEEEcCEeCCCC--C
Q 000452 1245 HGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE--P---AAGQILIDGIDISLI--G 1317 (1495)
Q Consensus 1245 ~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e--p---~~G~I~IDG~dI~~i--~ 1317 (1495)
+|.|+++|++++|+. .++|+|+||+|++||.+||+|++|||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 467999999999974 359999999999999999999999999999999999986 4 689999999999754 4
Q ss_pred HHHHhcccEEEcccCcCCC-CcHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 000452 1318 LHDLRTRLSIIPQDPVMFE-GTVRSNVDPL----EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1388 (1495)
Q Consensus 1318 l~~LR~~isiIpQdp~LF~-GTIR~NLdp~----~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~G 1388 (1495)
...+|++++|+||++.+|. .|+++|+... +..+ ++++.++++.+++.+.+..+ ....+.+||+|
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDR-------LKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHH-------hhCCcCcCCHH
Confidence 5578899999999999998 5999999631 1112 34567788888886544322 22346689999
Q ss_pred HHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChh
Q 000452 1389 QRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPR 1467 (1495)
Q Consensus 1389 QrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~ 1467 (1495)
||||++||||++++|++|||||||++||..+...+.+.|++..++.|||++||+++.+.. ||+|++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778899999999999865 9999999999999999999
Q ss_pred HHhhcCCC
Q 000452 1468 KLLENKSS 1475 (1495)
Q Consensus 1468 ~Ll~~~~s 1475 (1495)
++..++..
T Consensus 233 ~~~~~~~~ 240 (252)
T PRK14256 233 KIFTTPEK 240 (252)
T ss_pred HHHhCCCc
Confidence 99866543
No 207
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=6.2e-39 Score=367.50 Aligned_cols=214 Identities=26% Similarity=0.423 Sum_probs=186.3
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCC----------
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG---------- 1317 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~---------- 1317 (1495)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 579999999964 35999999999999999999999999999999999999999999999999997653
Q ss_pred ---HHHHhcccEEEcccCcCCC-CcHHHhcCCC----CCC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCC
Q 000452 1318 ---LHDLRTRLSIIPQDPVMFE-GTVRSNVDPL----EEY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENW 1385 (1495)
Q Consensus 1318 ---l~~LR~~isiIpQdp~LF~-GTIR~NLdp~----~~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nL 1385 (1495)
...+|++++++||++.+|. .|+++|+... ... .++++.++++..++.+...+. ...|
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~L 147 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHM-----------PAQL 147 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcC-----------hhhc
Confidence 2467889999999999885 7999999631 111 234577888888876655443 3579
Q ss_pred CchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEE
Q 000452 1386 SMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEE 1462 (1495)
Q Consensus 1386 S~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE 1462 (1495)
|+|||||++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|+|+++.+.+ ||++++|++|++++
T Consensus 148 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 227 (252)
T TIGR03005 148 SGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVE 227 (252)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998653 7899999999999864 99999999999999
Q ss_pred ecChhHHhhcCC
Q 000452 1463 YDSPRKLLENKS 1474 (1495)
Q Consensus 1463 ~gsp~~Ll~~~~ 1474 (1495)
.|+++++.+++.
T Consensus 228 ~g~~~~~~~~~~ 239 (252)
T TIGR03005 228 QGKPDEIFRQPK 239 (252)
T ss_pred eCCHHHHhcCCC
Confidence 999999986654
No 208
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.5e-38 Score=365.39 Aligned_cols=215 Identities=39% Similarity=0.677 Sum_probs=194.7
Q ss_pred CCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCeEEEEccCCcc
Q 000452 613 SSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWI 692 (1495)
Q Consensus 613 ~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~~ayv~Q~~~l 692 (1495)
+....++++|+++.+ +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.++|++|++++
T Consensus 35 ~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g~i~yv~q~~~l 109 (282)
T cd03291 35 SDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSGRISFSSQFSWI 109 (282)
T ss_pred CCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEEEEeCcccc
Confidence 344679999999852 469999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCc
Q 000452 693 QSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSA 772 (1495)
Q Consensus 693 ~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~sa 772 (1495)
++.|++||+.++......++.+.++++++.+.++.++.+.++.+++++.+||||||||++||||++.+|+++||||||++
T Consensus 110 ~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~g 189 (282)
T cd03291 110 MPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGY 189 (282)
T ss_pred cccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCcc
Confidence 99999999998765555567778888899888999999988889999999999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcC
Q 000452 773 VDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 773 LD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
||+.+.+.+.+.++....+++|+|++||+++.+..||++++|++|+++..|+.+++....
T Consensus 190 LD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 249 (282)
T cd03291 190 LDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSLR 249 (282)
T ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhcc
Confidence 999998888765555555689999999999998889999999999999999999887543
No 209
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-39 Score=375.31 Aligned_cols=215 Identities=20% Similarity=0.285 Sum_probs=184.4
Q ss_pred eEEEeeeeEEeCCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCC--------
Q 000452 1247 KIDLRDLQVRYAPHM---PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL-------- 1315 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~---~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~-------- 1315 (1495)
.|+++||+++|+... .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 389999999997543 259999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CCHHHHhcccEEEcccC--cCCCCcHHHhcCCCC---CCC----HHHHHHHHHHcCCc-HHHHh
Q 000452 1316 ----------------IGLHDLRTRLSIIPQDP--VMFEGTVRSNVDPLE---EYT----DEQIWEALDKCQLG-DEVRK 1369 (1495)
Q Consensus 1316 ----------------i~l~~LR~~isiIpQdp--~LF~GTIR~NLdp~~---~~s----d~ei~~aL~~~~L~-~~v~~ 1369 (1495)
.+...+|++++|+||+| .+|..|+++||.... ..+ ++++.++++.++|. +...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~- 160 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ- 160 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh-
Confidence 13467889999999987 688899999996321 223 34567888888885 3333
Q ss_pred ccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhh-
Q 000452 1370 KEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVI- 1447 (1495)
Q Consensus 1370 lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~- 1447 (1495)
....+||||||||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.
T Consensus 161 ----------~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 161 ----------RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLE 230 (305)
T ss_pred ----------CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHH
Confidence 2345799999999999999999999999999999999999999999998764 4799999999999875
Q ss_pred ccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1448 DSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1448 ~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
.||||++|++|++++.|+|+++.++
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHhcC
Confidence 5999999999999999999998764
No 210
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-39 Score=367.40 Aligned_cols=220 Identities=24% Similarity=0.420 Sum_probs=188.8
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CccEEEEcCEeCCC--CCHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE--P---AAGQILIDGIDISL--IGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e--p---~~G~I~IDG~dI~~--i~l~ 1319 (1495)
.|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 359999999999999999999999999999999999987 3 58999999999864 4456
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCC----CCCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPL----EEYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~----~~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
.+|++++|+||+|.+|.+|+++|+... +..++ +++.++++..++.+.+.. .....+.+||+||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKD-------RLHTQALSLSGGQQQ 162 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHH
Confidence 788999999999999999999999532 11222 345667888887654422 123455689999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++||||++++|+||+|||||++||+++...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+|++++
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999998778999999999999865 9999999999999999999998
Q ss_pred hcCCC
Q 000452 1471 ENKSS 1475 (1495)
Q Consensus 1471 ~~~~s 1475 (1495)
+++..
T Consensus 243 ~~~~~ 247 (259)
T PRK14274 243 SNPDD 247 (259)
T ss_pred hCCCC
Confidence 66543
No 211
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=365.25 Aligned_cols=220 Identities=29% Similarity=0.467 Sum_probs=189.7
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCC--CCH
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISL--IGL 1318 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~l 1318 (1495)
|.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 57999999999964 3599999999999999999999999999999999999863 69999999999875 455
Q ss_pred HHHhcccEEEcccCcCCCCcHHHhcCCCC---CC-----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 000452 1319 HDLRTRLSIIPQDPVMFEGTVRSNVDPLE---EY-----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1319 ~~LR~~isiIpQdp~LF~GTIR~NLdp~~---~~-----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
..+|++++|+||+|.+|+.|+++|+.... .. .++++.++++.+++.+.+.. .......+||+|||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKD-------RLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHH-------HHhcCCCCCCHHHH
Confidence 67899999999999999999999996321 11 23456777888887654432 22344568999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHH
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1469 (1495)
||++|||||+.+|++|+|||||++||+.+...+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987668999999999998865 999999999999999999999
Q ss_pred hhcCC
Q 000452 1470 LENKS 1474 (1495)
Q Consensus 1470 l~~~~ 1474 (1495)
..++.
T Consensus 233 ~~~~~ 237 (250)
T PRK14240 233 FTNPK 237 (250)
T ss_pred HhCCC
Confidence 86543
No 212
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-39 Score=384.87 Aligned_cols=216 Identities=20% Similarity=0.337 Sum_probs=189.0
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999964 3599999999999999999999999999999999999999999999999999876653 56899
Q ss_pred EEcccCcCCCC-cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 000452 1327 IIPQDPVMFEG-TVRSNVDPLE---EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1398 (1495)
Q Consensus 1327 iIpQdp~LF~G-TIR~NLdp~~---~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1398 (1495)
|+||++.+|.. |+++|+.... ..+ ++++.++++.+++.+...+.| .+||||||||++||||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLAra 147 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGRT 147 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999975 9999996321 122 345788899998876554443 4699999999999999
Q ss_pred HccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCCC
Q 000452 1399 LLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKSS 1475 (1495)
Q Consensus 1399 LLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~s 1475 (1495)
|+++|+||+||||||+||..+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++..
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~ 227 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPAN 227 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccc
Confidence 9999999999999999999999999999988653 7899999999998765 999999999999999999999877655
Q ss_pred hH
Q 000452 1476 SF 1477 (1495)
Q Consensus 1476 ~f 1477 (1495)
.|
T Consensus 228 ~~ 229 (369)
T PRK11000 228 RF 229 (369)
T ss_pred HH
Confidence 44
No 213
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-39 Score=374.33 Aligned_cols=216 Identities=25% Similarity=0.380 Sum_probs=185.3
Q ss_pred eEEEeeeeEEeCCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCC----CCHH
Q 000452 1247 KIDLRDLQVRYAPHM---PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL----IGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~---~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~----i~l~ 1319 (1495)
.|+++|++++|+... .++|+||||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 388999999996432 459999999999999999999999999999999999999999999999999863 3566
Q ss_pred HHhcccEEEcccC--cCCCCcHHHhcCCC---CCCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 000452 1320 DLRTRLSIIPQDP--VMFEGTVRSNVDPL---EEYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1320 ~LR~~isiIpQdp--~LF~GTIR~NLdp~---~~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
..|++++|+||+| .+|+.|+++|+... ...++ +.+.++++.++|.+.+. + .....||+|||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~------~----~~~~~LSgGq~ 151 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL------A----RSPFELSGGQM 151 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh------h----CCcccCCHHHH
Confidence 7889999999998 68889999999632 11233 34567788888763321 1 23457999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChh
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPR 1467 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~ 1467 (1495)
||++|||||+.+|+||||||||++||+.+...+.+.|++..+ +.|||+|+|+++.+. .||||++|++|++++.|+++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999988753 789999999999986 49999999999999999999
Q ss_pred HHhhc
Q 000452 1468 KLLEN 1472 (1495)
Q Consensus 1468 ~Ll~~ 1472 (1495)
+++++
T Consensus 232 ~~~~~ 236 (290)
T PRK13634 232 EIFAD 236 (290)
T ss_pred HHhcC
Confidence 98754
No 214
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-39 Score=371.01 Aligned_cols=215 Identities=25% Similarity=0.419 Sum_probs=188.8
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++|++++|+...+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 59999999999754446999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEcccCc--CCCCcHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1327 IIPQDPV--MFEGTVRSNVDPLE---EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1327 iIpQdp~--LF~GTIR~NLdp~~---~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
|+||+|. ++..|+++|+.... ..+ ++++.++++..++.+.... ...+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~lar 155 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADY-----------EPNALSGGQKQRVAIAG 155 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------CcccCCHHHHHHHHHHH
Confidence 9999994 44568999985321 112 3456778888887654432 34579999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
|++.+|++|||||||++||+.+...+.+.|++..+ ++|+|+++|+++.+..||||++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 156 VLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999998753 7899999999999988999999999999999999998764
No 215
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.3e-39 Score=365.32 Aligned_cols=212 Identities=25% Similarity=0.355 Sum_probs=185.9
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHH-hccc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL-RTRL 1325 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i 1325 (1495)
-|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.+.+..+. |.++
T Consensus 2 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 2 ILYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred eEEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 3789999999964 359999999999999999999999999999999999999999999999999988876654 5679
Q ss_pred EEEcccCcCCCC-cHHHhcCCCCC------------C---CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 000452 1326 SIIPQDPVMFEG-TVRSNVDPLEE------------Y---TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLdp~~~------------~---sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1389 (1495)
+|+||+|.+|.+ |+++|+..... . .++++.++++..++.+.. .....+||+||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Ge 148 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEA-----------DRLAGLLSHGQ 148 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHH
Confidence 999999999987 99999964211 0 234567777777765432 23345799999
Q ss_pred HHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhH
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1390 rQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1468 (1495)
|||++||||++++|++|+|||||++||+++...+.+.|++..+++|+|+++|+++.+.. ||+|++|++|++++.|++++
T Consensus 149 ~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~ 228 (242)
T TIGR03411 149 KQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQ 228 (242)
T ss_pred HHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHH
Confidence 99999999999999999999999999999999999999988777999999999999975 99999999999999999999
Q ss_pred Hhh
Q 000452 1469 LLE 1471 (1495)
Q Consensus 1469 Ll~ 1471 (1495)
++.
T Consensus 229 ~~~ 231 (242)
T TIGR03411 229 VQA 231 (242)
T ss_pred Hhc
Confidence 874
No 216
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=6e-39 Score=385.06 Aligned_cols=213 Identities=27% Similarity=0.424 Sum_probs=191.1
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.++++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.++|.++.+++..++|++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999964 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcccCcC-CCCcHHHhcCCCC-----------CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 000452 1327 IIPQDPVM-FEGTVRSNVDPLE-----------EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1327 iIpQdp~L-F~GTIR~NLdp~~-----------~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
++||++.+ |+.|+++|+.... ..+++.+.++++.+++.+...+. ...||+|||||++
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-----------~~~LSgGerQRv~ 149 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-----------VTSLSGGERQRVL 149 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHH
Confidence 99999987 6779999995321 12245688999999998665432 3479999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
|||||+++|+||+|||||++||+.+...+.+.|++.. .+.|||+++|+++.+. .||||++|++|++++.|+|++++..
T Consensus 150 IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 150 LARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 9999999999999999999999999999999999875 4789999999999995 5999999999999999999999854
No 217
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-39 Score=370.63 Aligned_cols=213 Identities=25% Similarity=0.392 Sum_probs=186.5
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCC-HHHHhcccE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG-LHDLRTRLS 1326 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~-l~~LR~~is 1326 (1495)
++++|++++|+.+ +++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999643 35999999999999999999999999999999999999999999999999998775 467889999
Q ss_pred EEcccCc--CCCCcHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1327 IIPQDPV--MFEGTVRSNVDPLE---EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1327 iIpQdp~--LF~GTIR~NLdp~~---~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
|+||+|. ++..|+++|+.... ..+ ++++.++++.+++.+..... ...||+|||||++|||
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qrv~lar 149 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRS-----------PKTLSGGQGQCVALAG 149 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCC-----------cccCCHHHHHHHHHHH
Confidence 9999985 56789999996431 122 34567778888876554433 3579999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
||+++|+||||||||++||+.+...+.+.|++.. .++|||+++|+++.+..||+|++|++|++++.|+++++...
T Consensus 150 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 150 ILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999998764 47999999999999988999999999999999999998754
No 218
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-39 Score=359.90 Aligned_cols=202 Identities=30% Similarity=0.429 Sum_probs=178.7
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+. .++|+|+||+|++| ++||+|+||||||||+++|.|+++|++|+|.++|.++.+.+ ..+|++++|
T Consensus 1 i~~~~~~~~~~~--~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK--KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC--EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 578999999964 35999999999999 99999999999999999999999999999999999998877 778999999
Q ss_pred EcccCcCCCC-cHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFEG-TVRSNVDPL---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLdp~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||+|.+|.+ |+++|+... ...+ ++++.++++.+++.+.... . ..+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~----~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKK-------K----IGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhC-------c----hhhCCHHHHHHHHHHHHH
Confidence 9999999987 999998631 1122 3467888999888655332 2 246999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEec
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1464 (1495)
+++|++|+|||||++||+.+.+.+.+.|++..+++|+|+|+|+++.+.. ||||++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999988777999999999999875 9999999999999865
No 219
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-39 Score=349.22 Aligned_cols=221 Identities=28% Similarity=0.363 Sum_probs=186.0
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.+++++|+..|.. ..||+||||+|++||.|+|+||||||||||++++.|+..|++|+|.+||.++... ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 5899999999976 4699999999999999999999999999999999999999999999999988544 45799
Q ss_pred EEcccCcCCCC-cHHHhcCCC-CC--C----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 000452 1327 IIPQDPVMFEG-TVRSNVDPL-EE--Y----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1398 (1495)
Q Consensus 1327 iIpQdp~LF~G-TIR~NLdp~-~~--~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1398 (1495)
||+|++.||+- ||++|+... .. . ..+.+.++|+++||.++-.+.|. .||||||||++||||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiARA 144 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIARA 144 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHHH
Confidence 99999999997 999998632 21 1 23468899999999999888775 579999999999999
Q ss_pred HccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchh-hhccCEEEEEeC--cEE---EEecChhHHh
Q 000452 1399 LLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITS-VIDSDMVLLLSH--GLI---EEYDSPRKLL 1470 (1495)
Q Consensus 1399 LLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~t-i~~~DrIlVL~~--G~i---vE~gsp~~Ll 1470 (1495)
|+.+|+||+||||.++||+.|...+|+-+.+..+ ++||++|||+++. +.-+|||+||.+ |+| ++.+-|..-
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~~~~~i~l~rpR- 223 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIGEELEIDLPRPR- 223 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcceeeEEecCCCCCc-
Confidence 9999999999999999999999999998877653 5999999999986 556999999999 444 333332221
Q ss_pred hcCCChHHHHHHHHhh
Q 000452 1471 ENKSSSFSQLVAEYTQ 1486 (1495)
Q Consensus 1471 ~~~~s~f~~lv~~~~~ 1486 (1495)
...+..|..+.++-+.
T Consensus 224 ~~~~~~f~~l~~~i~~ 239 (248)
T COG1116 224 IRGDPEFLELREELLE 239 (248)
T ss_pred cccChHHHHHHHHHHH
Confidence 2345678777766554
No 220
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-39 Score=356.47 Aligned_cols=202 Identities=33% Similarity=0.435 Sum_probs=174.9
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------- 682 (1495)
.|.+++.+..|+ ..++++|||++|+.||++|+.|||||||||||++|+|+..|++|.|.++|.
T Consensus 2 ~i~i~~~~~~~~---~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~ 78 (345)
T COG1118 2 SIRINNVKKRFG---AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRK 78 (345)
T ss_pred ceeehhhhhhcc---cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcc
Confidence 377888888885 457899999999999999999999999999999999999999999999995
Q ss_pred EEEEccCCccc-CccHHHHHhcCCCC---------CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHH
Q 000452 683 KAYVAQSPWIQ-SGKIEDNILFGKEM---------DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQ 752 (1495)
Q Consensus 683 ~ayv~Q~~~l~-~~ti~enI~fg~~~---------~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 752 (1495)
+|||+|+.-+| ..||.|||.||.+. .+.+..+.++.|+|+.--+ ..+.+||||||||||
T Consensus 79 VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~-----------ryP~QLSGGQrQRVA 147 (345)
T COG1118 79 VGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLAD-----------RYPAQLSGGQRQRVA 147 (345)
T ss_pred eeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhh-----------cCchhcChHHHHHHH
Confidence 59999998876 67999999999732 2356677788888865333 567899999999999
Q ss_pred HHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCcc-ccCCEEEEEeCCEEEEecChHHHHh
Q 000452 753 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLN-SKTVLYVTHQVEFL-PAADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvIlvTH~~~~l-~~~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
|||||..+|+++||||||+|||++..+.+-..+..-..+ |.|+++||||.++. ..||+|++|++|+|.+.|+++|+..
T Consensus 148 LARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~ 227 (345)
T COG1118 148 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYD 227 (345)
T ss_pred HHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhc
Confidence 999999999999999999999999988876544333333 78999999999986 4599999999999999999999976
Q ss_pred cC
Q 000452 831 SG 832 (1495)
Q Consensus 831 ~~ 832 (1495)
..
T Consensus 228 ~P 229 (345)
T COG1118 228 HP 229 (345)
T ss_pred CC
Confidence 53
No 221
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1e-38 Score=381.35 Aligned_cols=217 Identities=24% Similarity=0.401 Sum_probs=192.4
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
..++++|++++|.. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++..++.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 35999999999964 3599999999999999999999999999999999999999999999999999887654 5789
Q ss_pred EEEcccCcCCCC-cHHHhcCCC-C--CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1326 SIIPQDPVMFEG-TVRSNVDPL-E--EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLdp~-~--~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
+|++|++.+|.. ||++||... . ..+ ++++.++++.+++.+...+.| ..||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999976 999999632 1 223 345778899999987776665 368999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhhcCC
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLENKS 1474 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~~~~ 1474 (1495)
||+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+++.+. -||+|++|++|+|++.|+|+++++++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999998764 789999999999876 499999999999999999999998776
Q ss_pred ChH
Q 000452 1475 SSF 1477 (1495)
Q Consensus 1475 s~f 1477 (1495)
..|
T Consensus 238 ~~~ 240 (375)
T PRK09452 238 NLF 240 (375)
T ss_pred cHH
Confidence 554
No 222
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=368.29 Aligned_cols=219 Identities=26% Similarity=0.480 Sum_probs=188.4
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEEcCEeCCC--CCHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1319 (1495)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 5999999999964 459999999999999999999999999999999999865 789999999999875 3455
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCC----CC----CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPL----EE----YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~----~~----~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
.+|++++|+||+|.+|.+|+++|+... .. ..++.+.++++.+++.+.+.. .......+||+||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~q 171 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKD-------RLHSSALSLSGGQQQ 171 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHH-------HHhcCcccCCHHHHH
Confidence 678899999999999999999998631 11 113457778888887543321 123445689999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 172 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 172 RLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767899999999998764 9999999999999999999998
Q ss_pred hcCC
Q 000452 1471 ENKS 1474 (1495)
Q Consensus 1471 ~~~~ 1474 (1495)
.++.
T Consensus 252 ~~~~ 255 (268)
T PRK14248 252 TSPK 255 (268)
T ss_pred hCCC
Confidence 6543
No 223
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-39 Score=371.54 Aligned_cols=215 Identities=23% Similarity=0.392 Sum_probs=189.8
Q ss_pred eEEEeeeeEEeCCC----CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCC-HHHH
Q 000452 1247 KIDLRDLQVRYAPH----MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG-LHDL 1321 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~----~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~-l~~L 1321 (1495)
-++++|++++|+.. .+++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 58999999999743 246999999999999999999999999999999999999999999999999998654 4568
Q ss_pred hcccEEEcccCc--CCCCcHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 000452 1322 RTRLSIIPQDPV--MFEGTVRSNVDPLE---EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1322 R~~isiIpQdp~--LF~GTIR~NLdp~~---~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
|++++|+||+|. +|..|+++|+.... ..+ ++++.++++.+++.++..+.| ..||+|||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 67679999996321 122 456788899999987765544 4799999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHh
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
++|||||+++|++|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+..||+|++|++|++++.|+|+++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999864 378999999999999889999999999999999999997
Q ss_pred hc
Q 000452 1471 EN 1472 (1495)
Q Consensus 1471 ~~ 1472 (1495)
.+
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 54
No 224
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-39 Score=370.33 Aligned_cols=215 Identities=26% Similarity=0.377 Sum_probs=190.4
Q ss_pred eEEEeeeeEEeCCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1247 KIDLRDLQVRYAPH-MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~-~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
-|+++||+++|+.. ..++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743 34599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcccC--cCCCCcHHHhcCCC-C--CCCHH----HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1326 SIIPQDP--VMFEGTVRSNVDPL-E--EYTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1326 siIpQdp--~LF~GTIR~NLdp~-~--~~sd~----ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
+|+||+| .++..|+.+||... . ..+++ ++.++++.+++.++..+. ...||+|||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTRE-----------PARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 47788999999632 1 23443 356788888887654432 357999999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
|||+++|+||||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+..||+|++|++|++++.|++++++++
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999987754 7899999999999988999999999999999999998864
No 225
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4.5e-39 Score=327.48 Aligned_cols=210 Identities=29% Similarity=0.450 Sum_probs=186.4
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|.+++|.++|.. .|. ..+++|++||+|||+|+||||||||++++.||..|.+|+|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~-~~~---~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGH-LPM---RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCc-ceE---EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 567899999964 343 47799999999999999999999999999999999999999999999877665 467999
Q ss_pred EcccCcCCCC-cHHHhcC----CCC---CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFEG-TVRSNVD----PLE---EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLd----p~~---~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+.||.-||.- ||++|+. |.- ....+.+..|+.++|+.++...+|+ .||||||||++|||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHH
Confidence 9999999977 9999986 432 3345679999999999999999986 5799999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCC
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKS 1474 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~ 1474 (1495)
+|+.+||+||||.|+||+.-.+.+...+.+.. ++.|+++|||.++.+.. +||++++|+|||++.|+-++++..++
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~ 222 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKA 222 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCC
Confidence 99999999999999999999998888877665 46899999999998765 99999999999999999999997654
No 226
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=369.27 Aligned_cols=220 Identities=26% Similarity=0.464 Sum_probs=190.1
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEEcCEeCCCC--CH
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISLI--GL 1318 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~i--~l 1318 (1495)
..|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++ |++|+|.+||.++... +.
T Consensus 38 ~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 46999999999964 359999999999999999999999999999999999997 6899999999998653 45
Q ss_pred HHHhcccEEEcccCcCCCCcHHHhcCCC------CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 000452 1319 HDLRTRLSIIPQDPVMFEGTVRSNVDPL------EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1319 ~~LR~~isiIpQdp~LF~GTIR~NLdp~------~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
..+|++++|+||+|.+|.+|+++|+... ....++++.++++..++.+.+... ......+||+|||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~-------~~~~~~~LSgGe~qr 188 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKDQ-------LDSSGLDLSGGQQQR 188 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHHH-------HhCCcccCCHHHHHH
Confidence 6788999999999999999999999631 111245788889998886544321 234456899999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEE-EEeCcEEEEecChhHHh
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVL-LLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIl-VL~~G~ivE~gsp~~Ll 1470 (1495)
++|||||+++|+||||||||++||.++...+.+.|++..+++|||+|+|+++.+.. |||++ +|++|+|++.|+++++.
T Consensus 189 v~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 189 LCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999998777899999999999876 99975 57999999999999998
Q ss_pred hcCC
Q 000452 1471 ENKS 1474 (1495)
Q Consensus 1471 ~~~~ 1474 (1495)
+++.
T Consensus 269 ~~~~ 272 (285)
T PRK14254 269 ENPE 272 (285)
T ss_pred hCcC
Confidence 6543
No 227
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-39 Score=367.24 Aligned_cols=220 Identities=29% Similarity=0.424 Sum_probs=189.8
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCC--CCH
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISL--IGL 1318 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~l 1318 (1495)
+.++++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|+|+++| ++|+|.+||.++.. ...
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 46999999999964 3599999999999999999999999999999999999985 48999999999864 445
Q ss_pred HHHhcccEEEcccCcCCCCcHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 000452 1319 HDLRTRLSIIPQDPVMFEGTVRSNVDPL----EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1319 ~~LR~~isiIpQdp~LF~GTIR~NLdp~----~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
..+|.+++|+||+|.+|+.|+++|+... .... ++.+.++++.+++.+.+... + ...+..||+|||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~---~----~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDK---L----NKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhH---h----cCCcccCCHHHH
Confidence 6788999999999999999999999631 1112 23466888888887654322 2 344568999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEe-----CcEEEEec
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLS-----HGLIEEYD 1464 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~-----~G~ivE~g 1464 (1495)
||++|||||+++|++|+|||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999988777999999999999876 99999998 59999999
Q ss_pred ChhHHhhcCC
Q 000452 1465 SPRKLLENKS 1474 (1495)
Q Consensus 1465 sp~~Ll~~~~ 1474 (1495)
+++++++++.
T Consensus 237 ~~~~~~~~~~ 246 (259)
T PRK14260 237 VTTQIFSNPL 246 (259)
T ss_pred CHHHHhcCCC
Confidence 9999986543
No 228
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=8.3e-39 Score=359.32 Aligned_cols=203 Identities=26% Similarity=0.391 Sum_probs=175.6
Q ss_pred EEEeeeeEEeCCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHH---h
Q 000452 1248 IDLRDLQVRYAPHM--PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL---R 1322 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~--~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L---R 1322 (1495)
|+++||+++|++.. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.|+.+++..+. |
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68999999996432 459999999999999999999999999999999999999999999999999988876543 4
Q ss_pred -cccEEEcccCcCCC-CcHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 000452 1323 -TRLSIIPQDPVMFE-GTVRSNVDPL---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1393 (1495)
Q Consensus 1323 -~~isiIpQdp~LF~-GTIR~NLdp~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl 1393 (1495)
++++|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+...+. ...||+|||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHR-----------PSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHH
Confidence 68999999999986 5999999631 1222 23567778887776544332 357999999999
Q ss_pred HHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhccCEEEEEeCcEEE
Q 000452 1394 CLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVIDSDMVLLLSHGLIE 1461 (1495)
Q Consensus 1394 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~~DrIlVL~~G~iv 1461 (1495)
+|||||+++|+||||||||++||.++...+.+.|++.. .++|||+|+|+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999998764 378999999999999899999999999986
No 229
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=5.5e-39 Score=357.34 Aligned_cols=202 Identities=24% Similarity=0.373 Sum_probs=179.0
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+. .++|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++.+. .++|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 578999999953 4699999999999999999999999999999999999999999999999998765 567889999
Q ss_pred EcccCcCC-CCcHHHhcCCC---CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 000452 1328 IPQDPVMF-EGTVRSNVDPL---EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRR 1403 (1495)
Q Consensus 1328 IpQdp~LF-~GTIR~NLdp~---~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1403 (1495)
+||+|.+| ..|+++|+... ...+++++.++++..++.+...+. ...||+|||||++||||++++|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKK-----------VKGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhh-----------HhhCCHHHHHHHHHHHHHhcCC
Confidence 99999888 46999999632 123567888999999987665443 3469999999999999999999
Q ss_pred CeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEec
Q 000452 1404 KILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1404 ~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1464 (1495)
++|+|||||++||+.+.+.+.+.|++.. .++|+|+++|+++.+.. ||+|++|++|++++.|
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999998764 47899999999999865 9999999999999865
No 230
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-38 Score=364.17 Aligned_cols=219 Identities=27% Similarity=0.447 Sum_probs=189.5
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----ccEEEEcCEeCCCC--CHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPA-----AGQILIDGIDISLI--GLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~-----~G~I~IDG~dI~~i--~l~ 1319 (1495)
.|+++|++++|.. +++|+|+||+|++||++||+|++|||||||+++|.|+++|. +|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 6899999999964 45999999999999999999999999999999999999987 69999999998753 456
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCCC---C-CC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPLE---E-YT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~~---~-~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
.+|++++|+||+|.+|.+|+++|+.... . .. ++.+.++++..++.+.+.. .....+.+||+||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKD-------NLHKSGLALSGGQQQ 154 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhh-------HhhCCcccCCHHHHH
Confidence 7899999999999999999999996321 1 11 2345667777777654432 234556789999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++|||||+.+|++|||||||++||..+...+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999877 7999999999999999999997
Q ss_pred hcCC
Q 000452 1471 ENKS 1474 (1495)
Q Consensus 1471 ~~~~ 1474 (1495)
.++.
T Consensus 235 ~~~~ 238 (251)
T PRK14249 235 SRPR 238 (251)
T ss_pred hCCC
Confidence 6543
No 231
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=368.10 Aligned_cols=220 Identities=27% Similarity=0.428 Sum_probs=191.7
Q ss_pred cceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCC--CC
Q 000452 1245 HGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISL--IG 1317 (1495)
Q Consensus 1245 ~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~ 1317 (1495)
.+.|+++|++++|.. .++|+|+||+|++||.+||+|++|||||||+++|.|+++| ++|+|.+||.|+.. .+
T Consensus 23 ~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~ 100 (272)
T PRK14236 23 QTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD 100 (272)
T ss_pred CcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC
Confidence 457999999999964 3599999999999999999999999999999999999884 89999999999875 34
Q ss_pred HHHHhcccEEEcccCcCCCCcHHHhcCCC---CC-CC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 000452 1318 LHDLRTRLSIIPQDPVMFEGTVRSNVDPL---EE-YT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1318 l~~LR~~isiIpQdp~LF~GTIR~NLdp~---~~-~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1389 (1495)
...+|++++|+||++.+|.+|+++|+... .. .. ++++.++++.+++.+.+.. .....+.+||+||
T Consensus 101 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq 173 (272)
T PRK14236 101 VAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKD-------RLHENAFGLSGGQ 173 (272)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHH-------HhhCCcccCCHHH
Confidence 56789999999999999999999999632 11 11 3457888888888765432 2344567899999
Q ss_pred HHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhH
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1390 rQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1468 (1495)
|||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 174 ~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 253 (272)
T PRK14236 174 QQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDT 253 (272)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHH
Confidence 99999999999999999999999999999999999999988778999999999999865 99999999999999999999
Q ss_pred HhhcC
Q 000452 1469 LLENK 1473 (1495)
Q Consensus 1469 Ll~~~ 1473 (1495)
+.+++
T Consensus 254 ~~~~~ 258 (272)
T PRK14236 254 LFTSP 258 (272)
T ss_pred HhcCC
Confidence 98654
No 232
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=9.2e-39 Score=358.13 Aligned_cols=210 Identities=21% Similarity=0.338 Sum_probs=187.6
Q ss_pred EEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCH----HHHhcc
Q 000452 1249 DLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL----HDLRTR 1324 (1495)
Q Consensus 1249 ~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l----~~LR~~ 1324 (1495)
.+.|+.++|+++ .++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 578899999866 459999999999999999999999999999999999999999999999998876542 345678
Q ss_pred cEEEcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 000452 1325 LSIIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRK 1404 (1495)
Q Consensus 1325 isiIpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ 1404 (1495)
++|+||+|.+|+.|+++|+.....+++++..++++.+++.+.+..+|.|+++.......+||+|||||++||||++++|+
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 160 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTN 160 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999998654556777889999999999998899999999988899999999999999999999999
Q ss_pred eEEEEcCCCCCCHHHHHHHHH--HHHHhc-CCcEEEEEecCchhhhccCEEEEEeCcE
Q 000452 1405 ILMLDEATASVDTATDNLIQQ--SLRQHF-SDCTVITIAHRITSVIDSDMVLLLSHGL 1459 (1495)
Q Consensus 1405 ILiLDEaTsslD~~Td~~Iq~--~Ir~~f-~~~TVI~IAHRl~ti~~~DrIlVL~~G~ 1459 (1495)
||||||||++||..+...+.+ .++... .+.|+|+++|+.+.+..||+|++|++|.
T Consensus 161 illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 161 IVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred EEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999998887776 444332 3689999999999999999999999884
No 233
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.5e-38 Score=364.01 Aligned_cols=215 Identities=25% Similarity=0.391 Sum_probs=184.5
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCC--------H
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG--------L 1318 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~--------l 1318 (1495)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 3899999999964 35999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhcccEEEcccCcCCC-CcHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 000452 1319 HDLRTRLSIIPQDPVMFE-GTVRSNVDPL----EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1319 ~~LR~~isiIpQdp~LF~-GTIR~NLdp~----~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1389 (1495)
..+|++++|+||+|.+|. .|+++|+... .... ++.+.++++..++.+.. .....+||+||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKE-----------TSYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-----------hCChhhCChHH
Confidence 567889999999999886 6999999631 1222 23456677777765432 23456899999
Q ss_pred HHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChh
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPR 1467 (1495)
Q Consensus 1390 rQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~ 1467 (1495)
|||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|+++
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 229 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAK 229 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998865 37899999999999865 9999999999999999999
Q ss_pred HHhhcCC
Q 000452 1468 KLLENKS 1474 (1495)
Q Consensus 1468 ~Ll~~~~ 1474 (1495)
++.+.+.
T Consensus 230 ~~~~~~~ 236 (250)
T PRK11264 230 ALFADPQ 236 (250)
T ss_pred HHhcCCC
Confidence 9986543
No 234
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=366.80 Aligned_cols=221 Identities=27% Similarity=0.454 Sum_probs=188.8
Q ss_pred cceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEEcCEeCCC--CC
Q 000452 1245 HGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IG 1317 (1495)
Q Consensus 1245 ~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~ 1317 (1495)
...++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 22 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 22 KVVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred ceEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 336999999999964 359999999999999999999999999999999999987 699999999999853 45
Q ss_pred HHHHhcccEEEcccCcCCCCcHHHhcCCC---CCCC-----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 000452 1318 LHDLRTRLSIIPQDPVMFEGTVRSNVDPL---EEYT-----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1318 l~~LR~~isiIpQdp~LF~GTIR~NLdp~---~~~s-----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1389 (1495)
...+|++++|+||+|.+|.+|+++|+... .+.+ ++.+.++++..++.+.+. ......+.+||+||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~-------~~~~~~~~~LSgGe 172 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELK-------DRLHDNAYGLSGGQ 172 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHH-------HHHhcCcccCCHHH
Confidence 56788999999999999999999999631 1222 223456666666543332 22345567899999
Q ss_pred HHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhH
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1390 rQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1468 (1495)
|||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|++++
T Consensus 173 ~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~ 252 (271)
T PRK14238 173 QQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDK 252 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999999865 99999999999999999999
Q ss_pred HhhcCC
Q 000452 1469 LLENKS 1474 (1495)
Q Consensus 1469 Ll~~~~ 1474 (1495)
+..++.
T Consensus 253 ~~~~~~ 258 (271)
T PRK14238 253 IFSNPS 258 (271)
T ss_pred HHcCCC
Confidence 986643
No 235
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8.8e-39 Score=363.64 Aligned_cols=213 Identities=23% Similarity=0.379 Sum_probs=184.0
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCC--HHHHhccc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG--LHDLRTRL 1325 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~--l~~LR~~i 1325 (1495)
++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999964 45999999999999999999999999999999999999999999999999998643 45678899
Q ss_pred EEEcccCcCCC-CcHHHhcCCCC----CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1326 SIIPQDPVMFE-GTVRSNVDPLE----EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1326 siIpQdp~LF~-GTIR~NLdp~~----~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
+|+||++.+|. .|+++|+.... ..+ ++++.++++..++.+...+ ....||+|||||++||
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~la 148 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHH-----------YPSELSGGQQQRVAIA 148 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhc-----------ChhhcCHHHHHHHHHH
Confidence 99999999886 59999996321 122 2345667777776544433 2357999999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcC
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENK 1473 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1473 (1495)
||++++|+||+|||||++||.++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|++.++++++
T Consensus 149 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 149 RALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 99999999999999999999999999999998864 47899999999999865 9999999999999999999988654
No 236
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-39 Score=363.74 Aligned_cols=214 Identities=21% Similarity=0.313 Sum_probs=183.4
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCC------CCCHHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDIS------LIGLHD 1320 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~------~i~l~~ 1320 (1495)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ......
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 2 SIQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 3789999999964 35999999999999999999999999999999999999999999999999874 123456
Q ss_pred HhcccEEEcccCcCCCC-cHHHhcCC--C--CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1321 LRTRLSIIPQDPVMFEG-TVRSNVDP--L--EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1321 LR~~isiIpQdp~LF~G-TIR~NLdp--~--~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
+|++++|+||+|.+|.+ |+++|+.. . ...+ .+++.++++..++.+...+. ..+||+||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRF-----------PLHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHH
Confidence 78899999999999976 99999952 1 1122 23456677777776554443 3479999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHH
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1469 (1495)
|++||||++++|+||||||||++||+++...+.+.|++.. .++|+|+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999998865 37999999999999865 999999999999999999987
Q ss_pred hhcC
Q 000452 1470 LENK 1473 (1495)
Q Consensus 1470 l~~~ 1473 (1495)
.+.+
T Consensus 229 ~~~~ 232 (242)
T PRK11124 229 TQPQ 232 (242)
T ss_pred cCcc
Confidence 6543
No 237
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.5e-39 Score=355.84 Aligned_cols=198 Identities=24% Similarity=0.365 Sum_probs=174.2
Q ss_pred EEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEE
Q 000452 1249 DLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSII 1328 (1495)
Q Consensus 1249 ~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiI 1328 (1495)
+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999642 459999999999999999999999999999999999999999999999999864 4577889999
Q ss_pred cccC--cCCCCcHHHhcCCCC---CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 000452 1329 PQDP--VMFEGTVRSNVDPLE---EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRR 1403 (1495)
Q Consensus 1329 pQdp--~LF~GTIR~NLdp~~---~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1403 (1495)
||+| .+|+.|+++|+.... ...++++.++++.+++.++..+.| ..||+|||||++|||||+++|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhCC
Confidence 9998 467899999997421 123457899999999987655444 368999999999999999999
Q ss_pred CeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEE
Q 000452 1404 KILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIE 1461 (1495)
Q Consensus 1404 ~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~iv 1461 (1495)
++|+|||||++||+++...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999998873 57899999999999875 9999999999975
No 238
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=370.06 Aligned_cols=214 Identities=24% Similarity=0.376 Sum_probs=189.5
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
-++++|++++|+.+ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 3 ~l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 3 LIETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred eEEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 37899999999643 34999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcccC--cCCCCcHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1327 IIPQDP--VMFEGTVRSNVDPLE---EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1327 iIpQdp--~LF~GTIR~NLdp~~---~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
|+||+| .+|+.|+++|+.... ..+ ++.+.++++.+++.+.....| ..||+|||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 478889999996311 233 345788899999876655443 479999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
||+.+|++|||||||++||+.+...+.+.|++..+ ++|||++||+++.+. .||||++|++|++++.|+++++++.
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999999988653 789999999999985 5999999999999999999999753
No 239
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=363.95 Aligned_cols=218 Identities=25% Similarity=0.410 Sum_probs=189.2
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCCC--CHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLI--GLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l~ 1319 (1495)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999964 4599999999999999999999999999999999999875 799999999999753 345
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCCC---CC-C----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPLE---EY-T----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~~---~~-s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
.+|++++|+||+|.+|..|+++|+.... .. + ++++.++++.+++.+.+... .......||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~q 154 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDD-------LKKSALKLSGGQQQ 154 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhH-------hhCCcccCCHHHHH
Confidence 6789999999999999999999996321 11 1 24567888888886544322 23345689999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++||||++++|+||||||||++||+.+...+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|++++++
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988777999999999999876 9999999999999999999998
Q ss_pred hcC
Q 000452 1471 ENK 1473 (1495)
Q Consensus 1471 ~~~ 1473 (1495)
.++
T Consensus 235 ~~~ 237 (251)
T PRK14270 235 LEP 237 (251)
T ss_pred cCC
Confidence 654
No 240
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=375.07 Aligned_cols=226 Identities=20% Similarity=0.313 Sum_probs=187.9
Q ss_pred eEEEeeeeEEeCCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc----CCccEEEEcCEeCCCCCHHH
Q 000452 1247 KIDLRDLQVRYAPHM--PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE----PAAGQILIDGIDISLIGLHD 1320 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~--~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e----p~~G~I~IDG~dI~~i~l~~ 1320 (1495)
-++++|++++|+... ..+|+||||+|++||.+||||+||||||||+++|.|+++ |++|+|.+||.|+.+++.++
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 479999999997532 359999999999999999999999999999999999997 48999999999999998776
Q ss_pred Hhc----ccEEEcccCc--CCCC-cHHHhc----CCCCCC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCC
Q 000452 1321 LRT----RLSIIPQDPV--MFEG-TVRSNV----DPLEEY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENW 1385 (1495)
Q Consensus 1321 LR~----~isiIpQdp~--LF~G-TIR~NL----dp~~~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nL 1385 (1495)
+|+ ++++|||+|. ++.. |+.+|+ ...... .++++.++|++++|.+.... .......|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~--------l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASR--------LDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH--------HhCCchhC
Confidence 653 6999999995 4432 665554 322111 23567888999998653211 12345679
Q ss_pred CchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEE
Q 000452 1386 SMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEE 1462 (1495)
Q Consensus 1386 S~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE 1462 (1495)
|||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+. .||||+||++|+|+|
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999988753 789999999999985 599999999999999
Q ss_pred ecChhHHhhcCCChHHHH
Q 000452 1463 YDSPRKLLENKSSSFSQL 1480 (1495)
Q Consensus 1463 ~gsp~~Ll~~~~s~f~~l 1480 (1495)
.|+++++++++...|.+.
T Consensus 235 ~g~~~~~~~~p~hpyt~~ 252 (326)
T PRK11022 235 TGKAHDIFRAPRHPYTQA 252 (326)
T ss_pred ECCHHHHhhCCCChHHHH
Confidence 999999998765555543
No 241
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.1e-38 Score=359.84 Aligned_cols=218 Identities=28% Similarity=0.425 Sum_probs=190.9
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 684 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~a 684 (1495)
++++|+++.|+.. .+++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4689999999632 357999999999999999999999999999999999999999999999883 69
Q ss_pred EEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCE
Q 000452 685 YVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADI 763 (1495)
Q Consensus 685 yv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 763 (1495)
|++|++++++.|++||+.++.. ...++..+.++..++.+.++.+|.|.++..++++.+|||||||||+||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 9999999999999999988653 344555566677788888888988888888899999999999999999999999999
Q ss_pred eEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCCchhH
Q 000452 764 YLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGTDFME 837 (1495)
Q Consensus 764 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~~~~~ 837 (1495)
+||||||++||+.+.+.+.+. +....+++|+|++||+++++..||++++|++|++++.|+++++.+....+..
T Consensus 160 lllDEP~~~LD~~~~~~l~~~-l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~ 232 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRN-MHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAY 232 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHH-HHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHH
Confidence 999999999999998888754 5444568999999999999877999999999999999999998776544443
No 242
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.3e-38 Score=353.22 Aligned_cols=201 Identities=60% Similarity=1.002 Sum_probs=183.4
Q ss_pred EEEEeeEEEecCCCC--CCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCeEEEEccCCcccCc
Q 000452 618 IEIADGNFSWDISSH--NPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGTKAYVAQSPWIQSG 695 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~--~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~~ayv~Q~~~l~~~ 695 (1495)
++++|+++.|..... +++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|.++|++|+|.+++.
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~~ 80 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQNG 80 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhccC
Confidence 468999999963211 369999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCH
Q 000452 696 KIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDA 775 (1495)
Q Consensus 696 ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~ 775 (1495)
|++||+.++..+++++..++.+.+++.+.++.+|.|.+|.+++++.+||||||||++||||++++|+++||||||++||+
T Consensus 81 t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~ 160 (204)
T cd03250 81 TIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDA 160 (204)
T ss_pred cHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCH
Confidence 99999999877777777888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hCCCEEEEEecCCCccccCCEEEEEeCCE
Q 000452 776 HTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPAADLVLVIKDGK 818 (1495)
Q Consensus 776 ~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~~d~i~~l~~G~ 818 (1495)
+..+.+++.++... .+++|+|++||+++.+..||++++|++|+
T Consensus 161 ~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 161 HVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 99888887666544 34799999999999887799999999985
No 243
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.2e-38 Score=347.38 Aligned_cols=193 Identities=32% Similarity=0.429 Sum_probs=161.9
Q ss_pred EEEEeeEEEecCCC-CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 000452 618 IEIADGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------- 682 (1495)
++++|++..|.... ..++|+++||+|++||+++|+|||||||||||++|.|+..|++|.|.++|.
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 57899999996432 246899999999999999999999999999999999999999999999983
Q ss_pred ---EEEEccCCcc-cCccHHHHHhcC----CCC---CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHH
Q 000452 683 ---KAYVAQSPWI-QSGKIEDNILFG----KEM---DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRI 751 (1495)
Q Consensus 683 ---~ayv~Q~~~l-~~~ti~enI~fg----~~~---~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 751 (1495)
+|||+|+..+ .+.|++|||.+. ... .+++.++.++..+|.+... ..++.+|||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 5999999876 567999999853 221 1344555566556654332 256789999999999
Q ss_pred HHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCccccCCEEEEEeCCEEE
Q 000452 752 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPAADLVLVIKDGKIT 820 (1495)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~ 820 (1495)
||||||+.+|+++|.||||.+||.++++.+++.+..... .|+|+|+||||.+....|||++.|+||++.
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 999999999999999999999999999999875444333 489999999999999999999999999954
No 244
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-38 Score=366.32 Aligned_cols=219 Identities=28% Similarity=0.423 Sum_probs=189.0
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCCCC-HHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLIG-LHD 1320 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i~-l~~ 1320 (1495)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 6899999999964 3599999999999999999999999999999999999986 6999999999998763 456
Q ss_pred HhcccEEEcccCcCCCCcHHHhcCCC----CCCCHHHH----HHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 000452 1321 LRTRLSIIPQDPVMFEGTVRSNVDPL----EEYTDEQI----WEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1321 LR~~isiIpQdp~LF~GTIR~NLdp~----~~~sd~ei----~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
+|++++|+||+|.+|..|+++|+... ...+++++ .++++.+++.+.+. +.......+||+|||||
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LSgGq~qr 171 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVK-------DRLSDSPFRLSGGQQQL 171 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhCCcccCCHHHHHH
Confidence 78999999999999999999999632 12344443 45567777654331 22345567899999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
++|||||+++|+||||||||++||..+...+.+.|++..+++|||+|+|+++.+.. ||||++|++|++++.|+++++.+
T Consensus 172 l~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 251 (276)
T PRK14271 172 LCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFS 251 (276)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667999999999999875 99999999999999999999987
Q ss_pred cCC
Q 000452 1472 NKS 1474 (1495)
Q Consensus 1472 ~~~ 1474 (1495)
.+.
T Consensus 252 ~~~ 254 (276)
T PRK14271 252 SPK 254 (276)
T ss_pred CcC
Confidence 643
No 245
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-39 Score=368.55 Aligned_cols=212 Identities=28% Similarity=0.386 Sum_probs=188.3
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+.+.+..++|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999963 35999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEcccCcCCCC-cHHHhcCCCC-----------CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 000452 1327 IIPQDPVMFEG-TVRSNVDPLE-----------EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1327 iIpQdp~LF~G-TIR~NLdp~~-----------~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
|+||++.++.+ |+++|+.... ...++++.++++.+++.+.....| .+||||||||++
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~ 157 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQRAW 157 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHHHH
Confidence 99999877665 9999996310 112456888999999866544433 369999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhh
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
|||||+.+|+||||||||++||..+...+.+.|++.. .++|||+|||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 9999999999999999999999999999999998864 2799999999999986 599999999999999999999874
No 246
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.2e-39 Score=358.36 Aligned_cols=200 Identities=31% Similarity=0.450 Sum_probs=174.2
Q ss_pred EEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEE
Q 000452 1249 DLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSII 1328 (1495)
Q Consensus 1249 ~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiI 1328 (1495)
+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 46899999975334599999999999999999999999999999999999999999999999999988888889999999
Q ss_pred cccC--cCCCCcHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1329 PQDP--VMFEGTVRSNVDPL---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1329 pQdp--~LF~GTIR~NLdp~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
||+| .++..|+++|+... ...+ ++++.++++..++.+...+. ...||||||||++|||||
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~laral 149 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRS-----------PFTLSGGQKQRVAIAGVL 149 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCC-----------cccCCHHHHHHHHHHHHH
Confidence 9998 36788999999642 1122 23566778888776554332 357999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC-CcEEEEEecCchhhhc-cCEEEEEeCcE
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHFS-DCTVITIAHRITSVID-SDMVLLLSHGL 1459 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~-~~TVI~IAHRl~ti~~-~DrIlVL~~G~ 1459 (1495)
+++|++|||||||++||+++...+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|+
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 150 AMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999988753 7899999999999987 99999999985
No 247
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=9.5e-39 Score=374.41 Aligned_cols=213 Identities=25% Similarity=0.405 Sum_probs=186.3
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
..|+++||+++|+. ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.|+|.|+...+ ...|+++
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999964 45999999999999999999999999999999999999999999999999998755 4578999
Q ss_pred EEEcccCcCCC-CcHHHhcCCCC---CCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1326 SIIPQDPVMFE-GTVRSNVDPLE---EYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1326 siIpQdp~LF~-GTIR~NLdp~~---~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
+|+||+|.+|. .|+++||..+. ..++ +++.++++.+++.+. .++++ .+||+|||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENK-------ADAKV----GELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchH-------hcCch----hhCCHHHHHHHHHHH
Confidence 99999999986 59999997422 1232 345677777777543 34444 369999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhc
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
||+.+|++|+|||||++||+.+...+.+.|++.. .++|||+++|+++.+.. ||+|++|++|++++.|+|+++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999875 37899999999999965 999999999999999999999754
No 248
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=366.46 Aligned_cols=222 Identities=23% Similarity=0.393 Sum_probs=192.9
Q ss_pred CCcceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCC---
Q 000452 1243 PSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDIS--- 1314 (1495)
Q Consensus 1243 p~~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~--- 1314 (1495)
|..+.|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 12 ~~~~~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 12 PTQQKSEVNKLNFYYGG--YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCCceEEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 56788999999999974 3599999999999999999999999999999999999875 7999999998874
Q ss_pred -CCCHHHHhcccEEEcccCcCCCCcHHHhcCCCC--------CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCC
Q 000452 1315 -LIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE--------EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENW 1385 (1495)
Q Consensus 1315 -~i~l~~LR~~isiIpQdp~LF~GTIR~NLdp~~--------~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nL 1385 (1495)
....+.+|++++|+||+|.+|.+|+++|+.... +..++++.++++.+++.+.+. ........+|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVK-------DRLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhh-------HHHhCCcccC
Confidence 334567889999999999999999999996321 122467888898888765332 2234456789
Q ss_pred CchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEec
Q 000452 1386 SMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1386 S~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1464 (1495)
|+|||||++|||||+++|++|+|||||++||..+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999988777899999999999965 9999999999999999
Q ss_pred ChhHHhhcC
Q 000452 1465 SPRKLLENK 1473 (1495)
Q Consensus 1465 sp~~Ll~~~ 1473 (1495)
+++++..++
T Consensus 243 ~~~~~~~~~ 251 (265)
T PRK14252 243 ATDTIFIKP 251 (265)
T ss_pred CHHHHHhCC
Confidence 999998644
No 249
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=6.3e-39 Score=358.48 Aligned_cols=201 Identities=25% Similarity=0.352 Sum_probs=175.3
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCH---HHHhcc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL---HDLRTR 1324 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l---~~LR~~ 1324 (1495)
|+++|++++|+.+ +.+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 459999999999999999999999999999999999999999999999999987754 357889
Q ss_pred cEEEcccCcCCCC-cHHHhcCCC---CCC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1325 LSIIPQDPVMFEG-TVRSNVDPL---EEY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1325 isiIpQdp~LF~G-TIR~NLdp~---~~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
++++||+|.+|.+ |+++|+... ... .++++.++++.+++.+...+.| .+||+|||||++||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la 148 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP-----------AELSGGEQQRVAIA 148 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhcCHHHHHHHHHH
Confidence 9999999999985 999999632 112 2346778888888866544433 47999999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEE
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLI 1460 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~i 1460 (1495)
|||+++|+|+||||||++||+++...+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 149 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 149 RAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999863 47999999999999986 899999999974
No 250
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-39 Score=361.83 Aligned_cols=211 Identities=27% Similarity=0.406 Sum_probs=186.7
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+. ..+++|+||+|+|||++||+|++|||||||+++|+|+++|.+|+|.+||.++...+. .|+.+++
T Consensus 1 l~~~~l~~~~~~--~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGG--FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 578999999975 359999999999999999999999999999999999999999999999999987664 3678999
Q ss_pred EcccCcCCCC-cHHHhcCCC-------CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFEG-TVRSNVDPL-------EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLdp~-------~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||+|.+|.+ |+++|+... ....++++.++++..++.+.....| .+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~laral 145 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARAL 145 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999999976 999999621 1122456788888888877665544 47899999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcC
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENK 1473 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1473 (1495)
+++|+++||||||+++|..+...+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~ 222 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEP 222 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCC
Confidence 999999999999999999999999999988653 7999999999999865 8999999999999999999998654
No 251
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=8.9e-39 Score=361.80 Aligned_cols=211 Identities=25% Similarity=0.437 Sum_probs=181.3
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHH-hcccE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL-RTRLS 1326 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~is 1326 (1495)
|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 578999999964 359999999999999999999999999999999999999999999999999988876654 57899
Q ss_pred EEcccCcCCCC-cHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 000452 1327 IIPQDPVMFEG-TVRSNVDPL---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1398 (1495)
Q Consensus 1327 iIpQdp~LF~G-TIR~NLdp~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1398 (1495)
|+||+|.+|.+ |+++|+... .... ++++.++++..++.+.. .....+||+|||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la~a 147 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLR-----------KSKASSLSGGERRRVEIARA 147 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHHHHHHHHH
Confidence 99999999987 999999631 1122 22345566666654332 33446799999999999999
Q ss_pred HccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1399 LLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1399 LLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
++.+|++|||||||++||.++.+.+.+.|++.. .++|+|+++|+++.+.. ||+|++|++|++++.|+++++..
T Consensus 148 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 148 LATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999999998765 47899999999987765 99999999999999999999874
No 252
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.2e-39 Score=359.47 Aligned_cols=203 Identities=27% Similarity=0.330 Sum_probs=176.6
Q ss_pred EEEeeeeEEeCCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1248 IDLRDLQVRYAPHM--PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~--~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999996421 469999999999999999999999999999999999999999999999999863 46789
Q ss_pred EEEcccCcCCC-CcHHHhcCCC-C--C----CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1326 SIIPQDPVMFE-GTVRSNVDPL-E--E----YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1326 siIpQdp~LF~-GTIR~NLdp~-~--~----~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
+|+||+|.+|. .|+++|+... . . ..++++.+++++.++.+...+.+ .+||+|||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----------HQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 99999999987 6999999632 1 1 12456788899988876655443 469999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEe--CcEEEEecCh
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLS--HGLIEEYDSP 1466 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~--~G~ivE~gsp 1466 (1495)
||+++|++|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.+ ||+|++|+ +|+++|.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999864 37899999999998765 99999999 7999998764
No 253
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=7.5e-39 Score=357.61 Aligned_cols=202 Identities=22% Similarity=0.393 Sum_probs=175.7
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|.. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++|
T Consensus 1 i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN--VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECC--eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 578999999964 3599999999999999999999999999999999999999999999999999866543 568999
Q ss_pred EcccCcCCC-CcHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFE-GTVRSNVDPL---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~-GTIR~NLdp~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||++.+|. .|+++|+... ...+ ++++.++++..++.+.....| ..||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~laral 145 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKP-----------KQLSGGQRQRVALGRAI 145 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 999999985 5999999642 1122 335677788888866544433 47999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEec
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1464 (1495)
+++|+||+|||||++||+++...+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|+++++|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999998864 37899999999998876 9999999999999986
No 254
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=364.60 Aligned_cols=219 Identities=23% Similarity=0.452 Sum_probs=189.3
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEEcCEeCCC--CCHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISL--IGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~--i~l~ 1319 (1495)
.|+++||+++|+. .++|+|+||+|++||++||+|++|||||||+++|.|++. |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGS--FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECC--EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 5999999999964 359999999999999999999999999999999999986 479999999999853 4556
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCCC---CC---CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPLE---EY---TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1393 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~~---~~---sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl 1393 (1495)
.+|++++|+||+|.+|+.|+++|+.... .. .++++.++++.+++.+.+... ....+.+||+|||||+
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDK-------LKQSGLSLSGGQQQRL 160 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHH-------hcCCcccCCHHHHHHH
Confidence 7889999999999999899999996421 11 234566778888887655321 2345668999999999
Q ss_pred HHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEe---------CcEEEEe
Q 000452 1394 CLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLS---------HGLIEEY 1463 (1495)
Q Consensus 1394 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~---------~G~ivE~ 1463 (1495)
+|||||+++|+||||||||++||+++...+.+.|++..+++|||+|+|+++.+.. ||||++|+ +|++++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~ 240 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEF 240 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999988777899999999998765 89999998 8999999
Q ss_pred cChhHHhhcCC
Q 000452 1464 DSPRKLLENKS 1474 (1495)
Q Consensus 1464 gsp~~Ll~~~~ 1474 (1495)
|+++++.+++.
T Consensus 241 ~~~~~~~~~~~ 251 (264)
T PRK14243 241 DRTEKIFNSPQ 251 (264)
T ss_pred CCHHHHHhCCC
Confidence 99999987543
No 255
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=6.3e-39 Score=358.48 Aligned_cols=200 Identities=25% Similarity=0.354 Sum_probs=175.9
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHH---HHhcc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH---DLRTR 1324 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR~~ 1324 (1495)
|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+.+++.. .+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 7899999999533 4599999999999999999999999999999999999999999999999999887643 46889
Q ss_pred cEEEcccCcCCC-CcHHHhcCCC----C---CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1325 LSIIPQDPVMFE-GTVRSNVDPL----E---EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1325 isiIpQdp~LF~-GTIR~NLdp~----~---~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
++|+||+|.+|. .|+++|+... + +..+++++++++..++.+.....| .+||+|||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~la 149 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAIA 149 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999986 5999998632 1 112457888999999876654443 47999999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcE
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGL 1459 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ 1459 (1495)
|||+++|++|||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|+
T Consensus 150 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 150 RAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999999864 47999999999999886 89999999985
No 256
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=362.86 Aligned_cols=219 Identities=25% Similarity=0.421 Sum_probs=189.8
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCCC--CHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLI--GLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l~ 1319 (1495)
.|+++|++++|+. ..+|+|+||+|++||++||+|++|||||||+++|.|+.+| ++|+|.+||.++.+. +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 5999999999963 3599999999999999999999999999999999999763 489999999999876 456
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCCC---C-C----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPLE---E-Y----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~~---~-~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
+.|++++|+||+|.+|++|+++|+.... . . .++++.++++.+++.+.+. +.....+.+||+||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~q 156 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVK-------DRLHDSALSLSGGQQQ 156 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhH-------HHhhcChhhCCHHHHH
Confidence 7889999999999999999999997421 1 1 1345677788887765443 2234556789999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++||||++.+|+++||||||++||.++...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 157 RLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 999999999999999999999999999999999999988777999999999999965 9999999999999999999998
Q ss_pred hcCC
Q 000452 1471 ENKS 1474 (1495)
Q Consensus 1471 ~~~~ 1474 (1495)
+++.
T Consensus 237 ~~~~ 240 (253)
T PRK14261 237 ENPH 240 (253)
T ss_pred hCCC
Confidence 6543
No 257
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=365.37 Aligned_cols=211 Identities=26% Similarity=0.437 Sum_probs=187.4
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..++|+.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999964 359999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EcccCcCCCC-cHHHhcCCC--------CC---CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHH
Q 000452 1328 IPQDPVMFEG-TVRSNVDPL--------EE---YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCL 1395 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLdp~--------~~---~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~L 1395 (1495)
+||++.+|.+ |+++|++.. .. ..++++.++++.+++.+...+ ....||+|||||++|
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~l 149 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADR-----------RLTDLSGGQRQRAFL 149 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcC-----------CcccCCHHHHHHHHH
Confidence 9999999877 999999742 11 123457788888888654433 235799999999999
Q ss_pred HHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1396 GRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1396 ARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
|||++++|++|||||||++||+++...+.+.|++.. .++|||+++|+++.+.. ||+|++|++|++++.|+++++..
T Consensus 150 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 150 AMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 999999999999999999999999999999998864 47899999999999865 99999999999999999999874
No 258
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.5e-38 Score=364.86 Aligned_cols=225 Identities=27% Similarity=0.359 Sum_probs=188.3
Q ss_pred eEEEeeeeEEeCCC-------CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHH
Q 000452 1247 KIDLRDLQVRYAPH-------MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~-------~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~ 1319 (1495)
.|+++||+++|+.. ...+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999642 35699999999999999999999999999999999999999999999999999887754
Q ss_pred H---HhcccEEEcccCc--CC-CCcHHHhcCC-C---CC----CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCC
Q 000452 1320 D---LRTRLSIIPQDPV--MF-EGTVRSNVDP-L---EE----YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENW 1385 (1495)
Q Consensus 1320 ~---LR~~isiIpQdp~--LF-~GTIR~NLdp-~---~~----~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nL 1385 (1495)
+ +|++++|+||+|. ++ ..|+++|+.. . .. ..++++.++++..++.+.. ....+.+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~~~L 151 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSED----------ADKLPRQL 151 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh----------hhCChhhC
Confidence 3 6788999999983 44 3699999841 1 11 2235677788888775221 12234579
Q ss_pred CchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEE
Q 000452 1386 SMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEE 1462 (1495)
Q Consensus 1386 S~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE 1462 (1495)
|+|||||++|||||+.+|+||||||||++||+++...+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 231 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVE 231 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999988653 7899999999999975 99999999999999
Q ss_pred ecChhHHhhcCCChHHHHH
Q 000452 1463 YDSPRKLLENKSSSFSQLV 1481 (1495)
Q Consensus 1463 ~gsp~~Ll~~~~s~f~~lv 1481 (1495)
.|+++++++.++...+++.
T Consensus 232 ~g~~~~~~~~~~~~~~~~~ 250 (265)
T TIGR02769 232 ECDVAQLLSFKHPAGRNLQ 250 (265)
T ss_pred ECCHHHHcCCCCHHHHHHH
Confidence 9999999875433344443
No 259
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=381.25 Aligned_cols=204 Identities=27% Similarity=0.424 Sum_probs=179.5
Q ss_pred cceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHH----hcccEEEcccCcCCCC-
Q 000452 1263 FVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL----RTRLSIIPQDPVMFEG- 1337 (1495)
Q Consensus 1263 ~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L----R~~isiIpQdp~LF~G- 1337 (1495)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.|+.+.+..++ |++++|+||++.+|..
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 38999999999999999999999999999999999999999999999999998887654 4689999999999975
Q ss_pred cHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEc
Q 000452 1338 TVRSNVDPL---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDE 1410 (1495)
Q Consensus 1338 TIR~NLdp~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDE 1410 (1495)
|+++|+... ...+ ++++.++++.+++.++..+.| .+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 999999632 1122 356778899999987665554 3799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCCChH
Q 000452 1411 ATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKSSSF 1477 (1495)
Q Consensus 1411 aTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f 1477 (1495)
||++||+.+...+++.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+|+++++++...|
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~ 260 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDY 260 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHH
Confidence 999999999999999998864 47899999999998764 99999999999999999999987654433
No 260
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=369.17 Aligned_cols=215 Identities=26% Similarity=0.388 Sum_probs=183.5
Q ss_pred EEEeeeeEEeCCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCC----CHHH
Q 000452 1248 IDLRDLQVRYAPHM---PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI----GLHD 1320 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~---~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~~ 1320 (1495)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997432 3599999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhcccEEEcccC--cCCCCcHHHhcCCC---CCCCHHH----HHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1321 LRTRLSIIPQDP--VMFEGTVRSNVDPL---EEYTDEQ----IWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1321 LR~~isiIpQdp--~LF~GTIR~NLdp~---~~~sd~e----i~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
+|++++|+||+| .+|+.|+++|+... ...++++ +.++++..++.+.. .......||+||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESL----------FEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------hhCCcccCCHHHHH
Confidence 889999999998 68889999999632 1233332 45566777765321 12334579999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHH
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1469 (1495)
|++|||||+++|++|||||||++||+++...+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998864 37899999999998865 999999999999999999998
Q ss_pred hhc
Q 000452 1470 LEN 1472 (1495)
Q Consensus 1470 l~~ 1472 (1495)
+++
T Consensus 233 ~~~ 235 (280)
T PRK13649 233 FQD 235 (280)
T ss_pred hcC
Confidence 754
No 261
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.8e-38 Score=358.82 Aligned_cols=211 Identities=25% Similarity=0.414 Sum_probs=179.2
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHH-HhcccE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD-LRTRLS 1326 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~is 1326 (1495)
|+++||+++|+. .++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ--SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC--eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 578999999974 35999999999999999999999999999999999999999999999999998887654 467899
Q ss_pred EEcccCcCCCC-cHHHhcCCC-CC--CCHHH-HHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 000452 1327 IIPQDPVMFEG-TVRSNVDPL-EE--YTDEQ-IWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1401 (1495)
Q Consensus 1327 iIpQdp~LF~G-TIR~NLdp~-~~--~sd~e-i~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1401 (1495)
|+||+|.+|.+ |+++|+... .. ..+++ ..++++..+ +++........+||+|||||++|||||++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999987 999999631 11 12222 233344432 12222334456799999999999999999
Q ss_pred CCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1402 RRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1402 ~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
+|+||+|||||++||+.+...+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999999999999998753 7899999999999985 9999999999999999999873
No 262
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-38 Score=359.88 Aligned_cols=212 Identities=22% Similarity=0.332 Sum_probs=179.9
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHH-Hhccc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD-LRTRL 1325 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i 1325 (1495)
.|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.+.+..+ .|+++
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999964 45999999999999999999999999999999999999999999999999999887654 67889
Q ss_pred EEEcccCcCCCC-cHHHhcCCCC-CCCH----HHHHHHHHHc-CCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 000452 1326 SIIPQDPVMFEG-TVRSNVDPLE-EYTD----EQIWEALDKC-QLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1398 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLdp~~-~~sd----~ei~~aL~~~-~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1398 (1495)
+|+||++.+|.+ |+++|+.... ..+. +++.++++.. ++.+ ........||+|||||++||||
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~a 151 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHE-----------RRIQRAGTMSGGEQQMLAIGRA 151 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHH-----------HHhCchhhCCHHHHHHHHHHHH
Confidence 999999999986 9999996421 1122 2233334333 1221 1223446799999999999999
Q ss_pred HccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhh
Q 000452 1399 LLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1399 LLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
++++|+||||||||++||+.+...+.+.|++.. +++|||+++|+++.+. .||+|++|++|++++.|+++++.+
T Consensus 152 l~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 152 LMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred HHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 999999999999999999999999999998764 4799999999999765 599999999999999999999975
No 263
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=9.2e-39 Score=369.80 Aligned_cols=218 Identities=24% Similarity=0.394 Sum_probs=195.5
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
..|+++||+.+|. ...+++|||++|++||.+.++||||||||||+++|.||..|++|+|.+||.||..++.+ ++.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 4699999999998 34699999999999999999999999999999999999999999999999999998887 5789
Q ss_pred EEEcccCcCCCC-cHHHhcCCC-C---CCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1326 SIIPQDPVMFEG-TVRSNVDPL-E---EYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLdp~-~---~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
++|+|+..||+- ||++|+.+. . ...+ +.+.++|+.++|.++-.+.|. .|||||+||++||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~-----------qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPH-----------QLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChh-----------hhChHHHHHHHHH
Confidence 999999999977 999998632 2 1233 368999999999998777764 5799999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchh-hhccCEEEEEeCcEEEEecChhHHhhcC
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITS-VIDSDMVLLLSHGLIEEYDSPRKLLENK 1473 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~t-i~~~DrIlVL~~G~ivE~gsp~~Ll~~~ 1473 (1495)
|||..+|++|+||||-|+||.+-...+|.-+++.. .+.|.|.|||+.+. +.-+|||.||++|+|...|+|+|+..++
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999998888887654 37899999999876 4569999999999999999999999988
Q ss_pred CChHH
Q 000452 1474 SSSFS 1478 (1495)
Q Consensus 1474 ~s~f~ 1478 (1495)
.+.|-
T Consensus 229 ~~~fV 233 (352)
T COG3842 229 ATRFV 233 (352)
T ss_pred chHHH
Confidence 77663
No 264
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.5e-38 Score=343.14 Aligned_cols=172 Identities=32% Similarity=0.563 Sum_probs=162.8
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+.+..++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999999998899999999
Q ss_pred EcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEE
Q 000452 1328 IPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILM 1407 (1495)
Q Consensus 1328 IpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILi 1407 (1495)
+||+|.+|++|+++|+ ||+|||||++||||++++|++||
T Consensus 81 ~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~ll 119 (173)
T cd03246 81 LPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRILV 119 (173)
T ss_pred ECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 89999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhccCEEEEEeCcEE
Q 000452 1408 LDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVIDSDMVLLLSHGLI 1460 (1495)
Q Consensus 1408 LDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~~DrIlVL~~G~i 1460 (1495)
|||||++||+.+...+.+.|++.. +++|+|+++|+++.+..||+|++|++|++
T Consensus 120 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 120 LDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999998864 47899999999999988999999999974
No 265
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=370.98 Aligned_cols=217 Identities=26% Similarity=0.357 Sum_probs=183.3
Q ss_pred cceEEEeeeeEEeCCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCC----C-
Q 000452 1245 HGKIDLRDLQVRYAPHM---PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL----I- 1316 (1495)
Q Consensus 1245 ~g~I~f~nv~~~Y~~~~---~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~----i- 1316 (1495)
.|.|+++|++++|+... .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. +
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 46899999999996532 259999999999999999999999999999999999999999999999999853 2
Q ss_pred CHHHHhcccEEEcccC--cCCCCcHHHhcCCCC---CCCHH----HHHHHHHHcCCc-HHHHhccCCcccccccCCCCCC
Q 000452 1317 GLHDLRTRLSIIPQDP--VMFEGTVRSNVDPLE---EYTDE----QIWEALDKCQLG-DEVRKKEGKLDSKVTENGENWS 1386 (1495)
Q Consensus 1317 ~l~~LR~~isiIpQdp--~LF~GTIR~NLdp~~---~~sd~----ei~~aL~~~~L~-~~v~~lp~gLdt~v~e~G~nLS 1386 (1495)
+...+|++++|+||+| .+|.+|+++|+.... ..+.+ .+.++++..++. +. .......||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~-----------~~~~~~~LS 152 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDY-----------VKRSPFELS 152 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH-----------hcCChhhCC
Confidence 4567889999999998 478889999996321 22332 344556666653 22 123446799
Q ss_pred chHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEEe
Q 000452 1387 MGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEEY 1463 (1495)
Q Consensus 1387 ~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~ 1463 (1495)
+|||||++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+. .||+|++|++|++++.
T Consensus 153 ~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~ 232 (289)
T PRK13645 153 GGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISI 232 (289)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999988753 789999999999875 5999999999999999
Q ss_pred cChhHHhhc
Q 000452 1464 DSPRKLLEN 1472 (1495)
Q Consensus 1464 gsp~~Ll~~ 1472 (1495)
|++++++++
T Consensus 233 g~~~~~~~~ 241 (289)
T PRK13645 233 GSPFEIFSN 241 (289)
T ss_pred CCHHHHhcC
Confidence 999988753
No 266
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=3.3e-38 Score=372.68 Aligned_cols=226 Identities=25% Similarity=0.358 Sum_probs=188.9
Q ss_pred eEEEeeeeEEeCC--CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC---ccEEEEcCEeCCCCCHHHH
Q 000452 1247 KIDLRDLQVRYAP--HMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPA---AGQILIDGIDISLIGLHDL 1321 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~--~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~---~G~I~IDG~dI~~i~l~~L 1321 (1495)
.++++|++++|+. +...+|+||||+|++||++||||+||||||||+++|+|+++|. +|+|.+||.|+.+++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 5999999999963 2246999999999999999999999999999999999999996 9999999999999987776
Q ss_pred h----cccEEEcccC--cCCC-CcHHHhcC----CCCCCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCC
Q 000452 1322 R----TRLSIIPQDP--VMFE-GTVRSNVD----PLEEYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWS 1386 (1495)
Q Consensus 1322 R----~~isiIpQdp--~LF~-GTIR~NLd----p~~~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS 1386 (1495)
| ++|+|||||| .++. -|+.+|+. .....+. +++.++|+.+++.+ +. ..+...+..||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~-------~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPE-------AR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCC-------hH-HHhcCCcccCC
Confidence 4 4799999999 4555 37777762 2222232 34566777777642 11 11344567899
Q ss_pred chHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEEe
Q 000452 1387 MGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEEY 1463 (1495)
Q Consensus 1387 ~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~ 1463 (1495)
||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+. -||+|+||++|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999987654 789999999999997 4999999999999999
Q ss_pred cChhHHhhcCCChHHHH
Q 000452 1464 DSPRKLLENKSSSFSQL 1480 (1495)
Q Consensus 1464 gsp~~Ll~~~~s~f~~l 1480 (1495)
|+++++++++...|.+.
T Consensus 244 g~~~~i~~~p~~pyt~~ 260 (330)
T PRK09473 244 GNARDVFYQPSHPYSIG 260 (330)
T ss_pred CCHHHHHhCCCCHHHHH
Confidence 99999998766555553
No 267
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=368.27 Aligned_cols=215 Identities=30% Similarity=0.432 Sum_probs=184.0
Q ss_pred eEEEeeeeEEeCCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCC----CHH
Q 000452 1247 KIDLRDLQVRYAPHM---PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI----GLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~---~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~ 1319 (1495)
.|+++|++++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999997432 3599999999999999999999999999999999999999999999999998754 245
Q ss_pred HHhcccEEEcccC--cCCCCcHHHhcCCC---CCCC----HHHHHHHHHHcCCc-HHHHhccCCcccccccCCCCCCchH
Q 000452 1320 DLRTRLSIIPQDP--VMFEGTVRSNVDPL---EEYT----DEQIWEALDKCQLG-DEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1320 ~LR~~isiIpQdp--~LF~GTIR~NLdp~---~~~s----d~ei~~aL~~~~L~-~~v~~lp~gLdt~v~e~G~nLS~GQ 1389 (1495)
..|++++|+||+| .+|..|+++|+... ...+ ++.+.++++.+++. +... ....+||+||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLIS-----------KSPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhh-----------CCcccCCHHH
Confidence 6788999999998 58888999999521 1222 23456778888775 3322 2245799999
Q ss_pred HHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChh
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPR 1467 (1495)
Q Consensus 1390 rQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~ 1467 (1495)
|||++|||||+.+|++|||||||++||+.+...+.+.|++.. .+.|||++||+++.+. -||+|++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999864 4789999999999886 59999999999999999999
Q ss_pred HHhhc
Q 000452 1468 KLLEN 1472 (1495)
Q Consensus 1468 ~Ll~~ 1472 (1495)
+++++
T Consensus 231 ~~~~~ 235 (287)
T PRK13641 231 EIFSD 235 (287)
T ss_pred HHhcC
Confidence 98753
No 268
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-38 Score=353.28 Aligned_cols=200 Identities=28% Similarity=0.399 Sum_probs=175.7
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+.. . .|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999642 2 39999999999999999999999999999999999999999999999987653 4678999
Q ss_pred EcccCcCCCC-cHHHhcCCC-C---C---CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFEG-TVRSNVDPL-E---E---YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLdp~-~---~---~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||+|.+|.+ |+++|+... . . .+++++.++++.+++.+.....| .+||+|||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999986 999999632 1 1 23557889999999876665544 36899999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEec
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1464 (1495)
+++|++|||||||++||.++...+.+.|++.. .++|+|+|+|+++.+.. ||+|++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999875 37899999999999866 9999999999998864
No 269
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3e-38 Score=358.28 Aligned_cols=210 Identities=25% Similarity=0.410 Sum_probs=184.5
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+. +++|+|+||+|.+||++||+|++|||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~i~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGS--FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECC--eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 578999999974 359999999999999999999999999999999999999999999999999987653 4788999
Q ss_pred EcccCcCCCC-cHHHhcCCCC---CC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFEG-TVRSNVDPLE---EY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLdp~~---~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||+|.+|.+ |+++|+.... .. .++++.+++++.++.+...+. ..+||+||+||++||||+
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~laral 145 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRY-----------PNQLSGGQRQRVALARAL 145 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHHHHHHHHH
Confidence 9999999976 9999996321 11 235677888888886554433 257999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhc
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
+++|++++|||||++||.++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|+++|.|+++++++.
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999999998654 6999999999999865 999999999999999999999854
No 270
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-38 Score=365.30 Aligned_cols=213 Identities=23% Similarity=0.357 Sum_probs=188.8
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
-.|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999974 3599999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEcccCcCCC-CcHHHhcCCCC-----------CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 000452 1326 SIIPQDPVMFE-GTVRSNVDPLE-----------EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1393 (1495)
Q Consensus 1326 siIpQdp~LF~-GTIR~NLdp~~-----------~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl 1393 (1495)
+|+||+|.+|. .|+++|+.... +..++++.++++..++.+...+ ....||+|||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQ-----------SVDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcC-----------CcccCChHHHHHH
Confidence 99999998875 59999996421 1123467888888888655433 3457999999999
Q ss_pred HHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1394 CLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1394 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
+||||++++|++|+|||||++||+++...+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999988643 7899999999998865 9999999999999999999987
Q ss_pred h
Q 000452 1471 E 1471 (1495)
Q Consensus 1471 ~ 1471 (1495)
.
T Consensus 233 ~ 233 (265)
T PRK10253 233 T 233 (265)
T ss_pred h
Confidence 5
No 271
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-38 Score=358.79 Aligned_cols=210 Identities=25% Similarity=0.417 Sum_probs=185.4
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|.. + +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~--~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE--F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC--c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 578999999964 3 8999999999999999999999999999999999999999999999999987654 3789999
Q ss_pred EcccCcCCC-CcHHHhcCC---CCCC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFE-GTVRSNVDP---LEEY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~-GTIR~NLdp---~~~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||++.+|. .|+++|+.. .... .++++.++++.+++.+.+...+ .+||+|||||++||||+
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 144 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP-----------ETLSGGEQQRVAIARAL 144 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc-----------ccCCHHHHHHHHHHHHH
Confidence 999999995 699999962 1111 2346788899999877665443 46999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcC
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENK 1473 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~ 1473 (1495)
+++|++++|||||++||..+.+.+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|++++.|+++++.+.+
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 999999999999999999999999999998653 7999999999999876 9999999999999999999998654
No 272
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.8e-38 Score=356.73 Aligned_cols=206 Identities=21% Similarity=0.300 Sum_probs=180.1
Q ss_pred eEEEeeeeEEeCCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHH---H
Q 000452 1247 KIDLRDLQVRYAPHM--PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---L 1321 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~--~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---L 1321 (1495)
.|+++|++++|+.+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+..+ .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 599999999997532 25999999999999999999999999999999999999999999999999998887654 3
Q ss_pred -hcccEEEcccCcCCCC-cHHHhcCCC---CCC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 000452 1322 -RTRLSIIPQDPVMFEG-TVRSNVDPL---EEY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1322 -R~~isiIpQdp~LF~G-TIR~NLdp~---~~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
+++++|+||+|.+|.+ |+++|+... ... ..+++.++++.+++.+.....| ..||+|||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHH
Confidence 3679999999999886 999998631 111 2356788899999876655443 3689999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhccCEEEEEeCcEEEEe
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGLIEEY 1463 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~ivE~ 1463 (1495)
++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+..||+|++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999988642 7899999999999988999999999999874
No 273
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-38 Score=359.97 Aligned_cols=218 Identities=26% Similarity=0.443 Sum_probs=188.7
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCC-CCCHHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDIS-LIGLHD 1320 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~-~i~l~~ 1320 (1495)
.++++|++++|+. ..+|+|+||+|++||.+||+|++|||||||+++|.|+++| .+|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4899999999964 4599999999999999999999999999999999999986 5999999999986 455677
Q ss_pred HhcccEEEcccCcCCCCcHHHhcCCC---CCC-C----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 000452 1321 LRTRLSIIPQDPVMFEGTVRSNVDPL---EEY-T----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1321 LR~~isiIpQdp~LF~GTIR~NLdp~---~~~-s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
+|+.++|+||+|.+|.+|+++|+... ... + ++++.++++.+++.+.+. .........||+|||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~qr 153 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQR 153 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHHH
Confidence 89999999999999999999999632 111 1 234567788888765442 12233456899999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
++|||||+.+|+||||||||++||..+...+.+.|++..+++|||+|+|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFS 233 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999998777999999999999876 99999999999999999999875
Q ss_pred cC
Q 000452 1472 NK 1473 (1495)
Q Consensus 1472 ~~ 1473 (1495)
++
T Consensus 234 ~~ 235 (249)
T PRK14253 234 NP 235 (249)
T ss_pred CC
Confidence 43
No 274
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-38 Score=362.53 Aligned_cols=221 Identities=26% Similarity=0.432 Sum_probs=190.5
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----ccEEEEcCEeCCC--CCH
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPA-----AGQILIDGIDISL--IGL 1318 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~-----~G~I~IDG~dI~~--i~l 1318 (1495)
+.|+++|++++|+. +.+|+|+||+|++||.+||+|++|||||||+++|.|+++|+ +|+|.+||.|++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 46999999999964 35999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HHHhcccEEEcccCcCCCCcHHHhcCCC---CCC-C----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 000452 1319 HDLRTRLSIIPQDPVMFEGTVRSNVDPL---EEY-T----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1319 ~~LR~~isiIpQdp~LF~GTIR~NLdp~---~~~-s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
..+|+.++|+||++.+|..|+++|+... ... + ++++.++++.+++.+++..+ ....+..||+|||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LSgGq~ 156 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHK-------IHKSALDLSGGQQ 156 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhH-------hcCCcccCCHHHH
Confidence 6788999999999999999999999631 111 2 34567788888887655432 2345568999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeC-----cEEEE
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSH-----GLIEE 1462 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~-----G~ivE 1462 (1495)
||++|||||+++|+||||||||+++|.++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |++++
T Consensus 157 qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~ 236 (261)
T PRK14258 157 QRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVE 236 (261)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEE
Confidence 99999999999999999999999999999999999998743 47999999999999865 899999999 99999
Q ss_pred ecChhHHhhcCCC
Q 000452 1463 YDSPRKLLENKSS 1475 (1495)
Q Consensus 1463 ~gsp~~Ll~~~~s 1475 (1495)
.|+|+++.+++..
T Consensus 237 ~~~~~~~~~~~~~ 249 (261)
T PRK14258 237 FGLTKKIFNSPHD 249 (261)
T ss_pred eCCHHHHHhCCCC
Confidence 9999999876554
No 275
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-38 Score=360.66 Aligned_cols=203 Identities=27% Similarity=0.388 Sum_probs=179.3
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++
T Consensus 12 ~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i~ 84 (257)
T PRK11247 12 PLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDTR 84 (257)
T ss_pred cEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCceE
Confidence 5999999999964 35999999999999999999999999999999999999999999999998763 5688999
Q ss_pred EEcccCcCCC-CcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 000452 1327 IIPQDPVMFE-GTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRK 1404 (1495)
Q Consensus 1327 iIpQdp~LF~-GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ 1404 (1495)
|+||+|.+|. .|+++|+... ....++++.++++..++.+...+. ..+||||||||++|||||+++|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRANEW-----------PAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhcCC-----------hhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999987 5999999742 222356788899999887654332 35799999999999999999999
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChh
Q 000452 1405 ILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPR 1467 (1495)
Q Consensus 1405 ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~ 1467 (1495)
+|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.++.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999999999999998864 37899999999998754 9999999999999988754
No 276
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-38 Score=365.89 Aligned_cols=213 Identities=27% Similarity=0.415 Sum_probs=184.6
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCC--CCHHHHhccc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL--IGLHDLRTRL 1325 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~--i~l~~LR~~i 1325 (1495)
|+++|++++|+.+ +++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 7899999999633 459999999999999999999999999999999999999999999999999852 2345688999
Q ss_pred EEEcccC--cCCCCcHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1326 SIIPQDP--VMFEGTVRSNVDPLE---EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1326 siIpQdp--~LF~GTIR~NLdp~~---~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
+|+||+| .+|..|+++|+.... ..+ .+++.++++.+++.++.... ...||+|||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LS~Gq~qrv~la 149 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKP-----------PHHLSGGQKKRVAIA 149 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCC-----------hhhCCHHHHHHHHHH
Confidence 9999998 578899999995211 122 24577888888886543322 347999999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhc
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
||++++|++|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 150 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 150 GILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999999875 37899999999999875 999999999999999999998753
No 277
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-38 Score=369.86 Aligned_cols=220 Identities=29% Similarity=0.515 Sum_probs=190.7
Q ss_pred cceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEEcCEeCCCC--C
Q 000452 1245 HGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISLI--G 1317 (1495)
Q Consensus 1245 ~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~i--~ 1317 (1495)
...|+++|++++|.. .++|+|+||+|++||++||+|++|||||||+++|+|+++ |++|+|.+||.++... +
T Consensus 43 ~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 43 DAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred CceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 446999999999965 359999999999999999999999999999999999986 6899999999998753 4
Q ss_pred HHHHhcccEEEcccCcCCCCcHHHhcCCC-C-------------------CCCHHHHHHHHHHcCCcHHHHhccCCcccc
Q 000452 1318 LHDLRTRLSIIPQDPVMFEGTVRSNVDPL-E-------------------EYTDEQIWEALDKCQLGDEVRKKEGKLDSK 1377 (1495)
Q Consensus 1318 l~~LR~~isiIpQdp~LF~GTIR~NLdp~-~-------------------~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~ 1377 (1495)
...+|++++|+||++.+|.+|+++|+... . +..++++.++++.+++.+.+. ..
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEVN-------DR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhhh-------HH
Confidence 66788999999999999999999999631 0 012456788888888754432 23
Q ss_pred cccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEE-EEE
Q 000452 1378 VTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMV-LLL 1455 (1495)
Q Consensus 1378 v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrI-lVL 1455 (1495)
....+.+||+|||||++|||||+++|+||||||||++||+.+...+.+.|++..++.|||+|+|+++.+.. ||+| ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 34556789999999999999999999999999999999999999999999998777899999999999875 9997 578
Q ss_pred eCcEEEEecChhHHhhcC
Q 000452 1456 SHGLIEEYDSPRKLLENK 1473 (1495)
Q Consensus 1456 ~~G~ivE~gsp~~Ll~~~ 1473 (1495)
++|++++.|+++++++.+
T Consensus 274 ~~G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 274 TGGELVEYDDTDKIFENP 291 (305)
T ss_pred cCCEEEEeCCHHHHHhCc
Confidence 999999999999998653
No 278
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-38 Score=361.28 Aligned_cols=219 Identities=23% Similarity=0.355 Sum_probs=191.3
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCCC--CHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLI--GLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i--~l~ 1319 (1495)
.+.+++.+++|.. .++|+|+||+|++||++||+|++|||||||+++|.|+++| .+|+|.+||.|+... ...
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4889999999964 3599999999999999999999999999999999999986 799999999998753 445
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCCC------CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPLE------EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1393 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~~------~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl 1393 (1495)
.+|++++|+||+|.+|..|+++|+.... ...++++.++++.+++.+.+... ..+...+||+|||||+
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~-------~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKDK-------LKVSGLSLSGGQQQRL 158 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhhh-------hhCCcccCCHHHHHHH
Confidence 6788999999999999999999997421 11235788899999987655432 2345678999999999
Q ss_pred HHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEe--------CcEEEEec
Q 000452 1394 CLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLS--------HGLIEEYD 1464 (1495)
Q Consensus 1394 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~--------~G~ivE~g 1464 (1495)
+|||||+++|+||+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.+ ||||++|+ +|++++.|
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g 238 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMG 238 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeC
Confidence 9999999999999999999999999999999999988777899999999998875 99999996 89999999
Q ss_pred ChhHHhhcCC
Q 000452 1465 SPRKLLENKS 1474 (1495)
Q Consensus 1465 sp~~Ll~~~~ 1474 (1495)
+++++++++.
T Consensus 239 ~~~~~~~~~~ 248 (261)
T PRK14263 239 PTAQIFQNPR 248 (261)
T ss_pred CHHHHHhCCC
Confidence 9999987654
No 279
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-38 Score=362.62 Aligned_cols=219 Identities=26% Similarity=0.454 Sum_probs=187.0
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCC--CCHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISL--IGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~l~ 1319 (1495)
.++++|++++|+.. .+|+|+||+|++||++||+|++|||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGSF--HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECCE--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 58999999999643 599999999999999999999999999999999999974 69999999999864 4456
Q ss_pred HHhcccEEEcccCcCCCC-cHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 000452 1320 DLRTRLSIIPQDPVMFEG-TVRSNVDPL----EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~G-TIR~NLdp~----~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
.+|+.++++||++.+|.. |+++|+... +..+ ++++.++++.+++.+.+.. .......+||+|||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 154 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKD-------RLDKPGGGLSGGQQ 154 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHH
Confidence 788999999999999974 999998521 1111 3456778888887644321 22334568999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhh-ccCEEEEEe------CcEEEEe
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVI-DSDMVLLLS------HGLIEEY 1463 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~-~~DrIlVL~------~G~ivE~ 1463 (1495)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|||+|+|+++.+. .||+|++|+ +|+|++.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 999999999999999999999999999999999999998766799999999999986 499999997 8999999
Q ss_pred cChhHHhhcCC
Q 000452 1464 DSPRKLLENKS 1474 (1495)
Q Consensus 1464 gsp~~Ll~~~~ 1474 (1495)
|+++++++++.
T Consensus 235 ~~~~~~~~~~~ 245 (258)
T PRK14241 235 DDTEKIFSNPT 245 (258)
T ss_pred CCHHHHHhCcC
Confidence 99999986543
No 280
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-38 Score=358.62 Aligned_cols=213 Identities=25% Similarity=0.408 Sum_probs=182.3
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHH-Hhccc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD-LRTRL 1325 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i 1325 (1495)
.|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+..+ .|+++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 4889999999964 35999999999999999999999999999999999999999999999999998877644 57889
Q ss_pred EEEcccCcCCCC-cHHHhcCCCC----CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1326 SIIPQDPVMFEG-TVRSNVDPLE----EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLdp~~----~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
+|+||+|.+|.+ |+++|+.... ..+ ++.+.+.++..++.+. .......||+|||||++||
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la 149 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHL-----------RDSMGQSLSGGERRRVEIA 149 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHH-----------hhcchhhCCHHHHHHHHHH
Confidence 999999999885 9999997431 122 2235555665555432 3334567999999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
||++++|++|||||||++||+.+...+.+.+++.. .++|+|+++|+++.+. .||+|++|++|++++.|+++++++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999999999988754 4789999999998775 5999999999999999999998753
No 281
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-38 Score=362.76 Aligned_cols=220 Identities=21% Similarity=0.402 Sum_probs=189.9
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCC--CCH
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISL--IGL 1318 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~--i~l 1318 (1495)
-.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. ...
T Consensus 19 ~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 19 SVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred ceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 36999999999964 3599999999999999999999999999999999999863 59999999999864 344
Q ss_pred HHHhcccEEEcccCcCCCCcHHHhcCCCC---C---CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 000452 1319 HDLRTRLSIIPQDPVMFEGTVRSNVDPLE---E---YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1319 ~~LR~~isiIpQdp~LF~GTIR~NLdp~~---~---~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
..+|++++|+||+|.+|.+|+++|+.... . ..++++.++++.+++.+.+... .......||+|||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKDK-------LKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHHH-------hcCCcccCCHHHHHH
Confidence 56789999999999999999999996421 1 1245567788888886555321 233456899999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEe---------CcEEEE
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLS---------HGLIEE 1462 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~---------~G~ivE 1462 (1495)
++|||||+++|+||||||||++||..+...+.+.|++..+++|||+|+|+++.+.. ||+|++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999988778999999999999864 99999997 899999
Q ss_pred ecChhHHhhcCC
Q 000452 1463 YDSPRKLLENKS 1474 (1495)
Q Consensus 1463 ~gsp~~Ll~~~~ 1474 (1495)
.|+++++..++.
T Consensus 250 ~g~~~~~~~~~~ 261 (274)
T PRK14265 250 FSPTEQMFGSPQ 261 (274)
T ss_pred eCCHHHHHhCCC
Confidence 999999986543
No 282
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-38 Score=360.82 Aligned_cols=222 Identities=27% Similarity=0.410 Sum_probs=189.2
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc--C---CccEEEEcCEeCCC--CCHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE--P---AAGQILIDGIDISL--IGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e--p---~~G~I~IDG~dI~~--i~l~ 1319 (1495)
.|+++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999974 459999999999999999999999999999999999975 4 58999999999864 3455
Q ss_pred HHhcccEEEcccCcCCCCcHHHhcCCC---CC--C---CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1320 DLRTRLSIIPQDPVMFEGTVRSNVDPL---EE--Y---TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~GTIR~NLdp~---~~--~---sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
.+|++++|+||+|.+|.+|+++|+... .. . .++++.++++.+++.+.+. ........+||+||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~Gq~q 155 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVK-------DHLHESALSLSGGQQQ 155 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchh-------hHHhcCcccCCHHHHH
Confidence 678899999999999999999999621 11 1 1345677788887764332 1233445689999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++||||++++|+||||||||++||..+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|++.+..
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 156 RVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988767899999999999875 9999999999999999999998
Q ss_pred hcCCChH
Q 000452 1471 ENKSSSF 1477 (1495)
Q Consensus 1471 ~~~~s~f 1477 (1495)
.++...+
T Consensus 236 ~~~~~~~ 242 (252)
T PRK14255 236 LNPKEKE 242 (252)
T ss_pred cCCCChH
Confidence 7654433
No 283
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.4e-38 Score=355.41 Aligned_cols=197 Identities=30% Similarity=0.420 Sum_probs=170.2
Q ss_pred EEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEE
Q 000452 1249 DLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSII 1328 (1495)
Q Consensus 1249 ~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiI 1328 (1495)
+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 46899999964 35999999999999999999999999999999999999999999999998864 578899999
Q ss_pred cccCcC---CCCcHHHhcCCC-CC----------CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 000452 1329 PQDPVM---FEGTVRSNVDPL-EE----------YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1329 pQdp~L---F~GTIR~NLdp~-~~----------~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
||+|.+ |+.|+++|+... .. ..++++.++++.+++.+...+. ..+||||||||++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~ 142 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----------IGELSGGQQQRVL 142 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----------cccCCHHHHHHHH
Confidence 999976 668999998632 11 1235678889999887654432 3479999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEec
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1464 (1495)
|||||+++|++|||||||++||+++...+.+.|++.. +++|||+|+|+++.+.. ||+|++|++| +++.|
T Consensus 143 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 143 LARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999998864 57899999999999876 8999999986 55544
No 284
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-38 Score=360.72 Aligned_cols=212 Identities=27% Similarity=0.375 Sum_probs=186.7
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 2 MLEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 3789999999964 35999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEcccCcC-CCCcHHHhcCCCC--C-----CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 000452 1327 IIPQDPVM-FEGTVRSNVDPLE--E-----YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1398 (1495)
Q Consensus 1327 iIpQdp~L-F~GTIR~NLdp~~--~-----~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1398 (1495)
|+||++.+ +..|+++|+.... . ..++++.++++.+++.+...+. ...||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRD-----------YPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCC-----------cccCCHHHHHHHHHHHH
Confidence 99999987 6779999986321 1 1234577888888886544332 35799999999999999
Q ss_pred Hc------cCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHH
Q 000452 1399 LL------KRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1399 LL------r~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~L 1469 (1495)
|+ ++|++|+|||||++||+.+...+.+.|++.. .+.|||+|+|+++.+. .||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999864 4789999999999887 5999999999999999999998
Q ss_pred hh
Q 000452 1470 LE 1471 (1495)
Q Consensus 1470 l~ 1471 (1495)
.+
T Consensus 229 ~~ 230 (258)
T PRK13548 229 LT 230 (258)
T ss_pred hC
Confidence 75
No 285
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=339.56 Aligned_cols=200 Identities=29% Similarity=0.423 Sum_probs=171.6
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC---------------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 681 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--------------- 681 (1495)
.|+++|++..|+ +++.+|+||||+|++||+++|+|++||||||||++|.|..+|++|+|.++|
T Consensus 3 ~i~~~nl~k~yp--~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYP--GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecC--CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 689999999996 357899999999999999999999999999999999999999999999998
Q ss_pred -eEEEEccCCccc-CccHHHHHhcCCC------------CCHHHHH---HHHHHhCcHHHHhhcCCCCcccccCCCCccc
Q 000452 682 -TKAYVAQSPWIQ-SGKIEDNILFGKE------------MDRERYN---AVLDACSLEKDLEILSFGDQTVVGERGINLS 744 (1495)
Q Consensus 682 -~~ayv~Q~~~l~-~~ti~enI~fg~~------------~~~~~~~---~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LS 744 (1495)
.+||++|++.+- ..|+.+|++.|+- +.++... ++++..++.+.. -.+..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A-----------~qra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKA-----------YQRASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHH-----------HHHhccCC
Confidence 259999998875 5699999998742 2333333 344555554433 36788999
Q ss_pred hHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCccc-cCCEEEEEeCCEEEEe
Q 000452 745 GGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLP-AADLVLVIKDGKITQA 822 (1495)
Q Consensus 745 GGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~ 822 (1495)
|||+|||+|||||+++|+|+|-|||+++|||.+++++++.+.+.. ..|.|+|+.-|++++.. +||||+-|++|+|++.
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999997654433 35899999999999975 5999999999999999
Q ss_pred cChHHHH
Q 000452 823 GKYTDVI 829 (1495)
Q Consensus 823 g~~~~l~ 829 (1495)
|+.+|+-
T Consensus 230 g~~~el~ 236 (258)
T COG3638 230 GPASELT 236 (258)
T ss_pred CChhhhh
Confidence 9998853
No 286
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-38 Score=365.95 Aligned_cols=212 Identities=28% Similarity=0.404 Sum_probs=182.9
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCC--CCCHHHHhccc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDIS--LIGLHDLRTRL 1325 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~--~i~l~~LR~~i 1325 (1495)
|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. +.+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 789999999964 35999999999999999999999999999999999999999999999999985 34456788999
Q ss_pred EEEcccCc--CCCCcHHHhcCCC---CCCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1326 SIIPQDPV--MFEGTVRSNVDPL---EEYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1326 siIpQdp~--LF~GTIR~NLdp~---~~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
+|+||+|. +|..|+.+|+... ...++ +++.++++.+++.++.. . ...+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~----~~~~LSgG~~qrl~la 148 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRH-------Q----PIQCLSHGQKKRVAIA 148 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhc-------C----CchhCCHHHHHHHHHH
Confidence 99999985 6778999998632 11222 34567788888765432 2 2457999999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhc
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
|||+.+|+||||||||++||+.+...+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|++++++.+
T Consensus 149 raL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 149 GALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998864 47899999999999865 999999999999999999998754
No 287
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-38 Score=376.05 Aligned_cols=218 Identities=24% Similarity=0.414 Sum_probs=190.3
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhccc
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRL 1325 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i 1325 (1495)
..|+++|++++|.. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++.+++. .|+++
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 36999999999964 359999999999999999999999999999999999999999999999999987764 47789
Q ss_pred EEEcccCcCCCC-cHHHhcCCC-C--CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1326 SIIPQDPVMFEG-TVRSNVDPL-E--EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLdp~-~--~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
+|++|++.+|.. |+++|+... . ..+ ++++.++++..++.+...+.| .+||||||||++|||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP-----------HQLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999976 999999732 1 222 345678888888876655544 368999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhhcCC
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLENKS 1474 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~~~~ 1474 (1495)
||+++|++|+||||||+||..+...+.+.|++.. .+.|+|+|||+++.+. -||+|++|++|++++.|+|+++.+++.
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~ 242 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPT 242 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCc
Confidence 9999999999999999999999999988777654 3689999999999875 599999999999999999999998876
Q ss_pred ChHH
Q 000452 1475 SSFS 1478 (1495)
Q Consensus 1475 s~f~ 1478 (1495)
..|.
T Consensus 243 ~~~~ 246 (377)
T PRK11607 243 TRYS 246 (377)
T ss_pred cHHH
Confidence 6553
No 288
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3.8e-38 Score=363.58 Aligned_cols=228 Identities=25% Similarity=0.337 Sum_probs=190.5
Q ss_pred eEEEeeeeEEeCC-------CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHH
Q 000452 1247 KIDLRDLQVRYAP-------HMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~-------~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~ 1319 (1495)
.|+++||+++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 4899999999952 123699999999999999999999999999999999999999999999999999866666
Q ss_pred HHhcccEEEcccCc--CCCC-cHHHhcCC----CC----CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 000452 1320 DLRTRLSIIPQDPV--MFEG-TVRSNVDP----LE----EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1388 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~--LF~G-TIR~NLdp----~~----~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~G 1388 (1495)
..|++++|+||+|. ++.. |+.+|+.. .. ...++++.++++.+++.+... +. ...+||+|
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~------~~----~~~~LS~G 153 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHA------SY----YPHMLAPG 153 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHH------hc----CchhcCHH
Confidence 66778999999985 4544 88888742 11 112356788999999843221 11 22479999
Q ss_pred HHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecC
Q 000452 1389 QRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDS 1465 (1495)
Q Consensus 1389 QrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gs 1465 (1495)
||||++|||||+++|+||||||||++||+++...+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+
T Consensus 154 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 233 (267)
T PRK15112 154 QKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGS 233 (267)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCC
Confidence 99999999999999999999999999999999999999998643 7899999999999986 99999999999999999
Q ss_pred hhHHhhcCC-ChHHHHHHHH
Q 000452 1466 PRKLLENKS-SSFSQLVAEY 1484 (1495)
Q Consensus 1466 p~~Ll~~~~-s~f~~lv~~~ 1484 (1495)
++++.+++. ..+++++.++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~ 253 (267)
T PRK15112 234 TADVLASPLHELTKRLIAGH 253 (267)
T ss_pred HHHHhcCCCCHHHHHHHHhc
Confidence 999987643 4455676654
No 289
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-38 Score=365.15 Aligned_cols=224 Identities=24% Similarity=0.391 Sum_probs=189.5
Q ss_pred cceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-----CCccEEEEcCEeCCCC--C
Q 000452 1245 HGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-----PAAGQILIDGIDISLI--G 1317 (1495)
Q Consensus 1245 ~g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-----p~~G~I~IDG~dI~~i--~ 1317 (1495)
...|+++|++++|+. ..+|+|+||+|++||++||+|++|||||||+++|.|+.+ |++|+|.+||.++... .
T Consensus 37 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGE--FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred ceEEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 346999999999964 359999999999999999999999999999999999865 4999999999998653 3
Q ss_pred HHHHhcccEEEcccCcCCCCcHHHhcCCCC---CC-C----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 000452 1318 LHDLRTRLSIIPQDPVMFEGTVRSNVDPLE---EY-T----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1318 l~~LR~~isiIpQdp~LF~GTIR~NLdp~~---~~-s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1389 (1495)
...+|++++|+||+|.+|.+|+++|+.... .. + ++++.++++.+++.+.+.. .+ ......|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~---~~----~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSD---RL----DKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhh---Hh----hCChhhCCHHH
Confidence 346789999999999999999999996321 11 1 2456678888887543321 22 23456799999
Q ss_pred HHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhH
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1390 rQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1468 (1495)
|||++|||||+++|++|||||||++||.++...+.+.|++..+++|||+++|+++.+.+ ||+|++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999865 99999999999999999999
Q ss_pred HhhcCCChH
Q 000452 1469 LLENKSSSF 1477 (1495)
Q Consensus 1469 Ll~~~~s~f 1477 (1495)
+.+++...+
T Consensus 268 ~~~~~~~~~ 276 (286)
T PRK14275 268 LFTNPKDRM 276 (286)
T ss_pred HHhCCCcHH
Confidence 987654333
No 290
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-38 Score=361.46 Aligned_cols=212 Identities=20% Similarity=0.347 Sum_probs=182.1
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHH-hccc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL-RTRL 1325 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i 1325 (1495)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5999999999964 359999999999999999999999999999999999999999999999999998876665 4569
Q ss_pred EEEcccCcCCCC-cHHHhcCCCCC-------------------CC---HHHHHHHHHHcCCcHHHHhccCCcccccccCC
Q 000452 1326 SIIPQDPVMFEG-TVRSNVDPLEE-------------------YT---DEQIWEALDKCQLGDEVRKKEGKLDSKVTENG 1382 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLdp~~~-------------------~s---d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G 1382 (1495)
+|+||+|.+|.+ |+++|+..... .. .+++.++++..++.+ ......
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~ 151 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLE-----------HANRQA 151 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhh-----------hhhCCh
Confidence 999999999986 99999974210 00 123445555555543 233445
Q ss_pred CCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcE
Q 000452 1383 ENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGL 1459 (1495)
Q Consensus 1383 ~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ 1459 (1495)
.+||+|||||++||||++.+|+||||||||++||+.+...+.+.|++..+ ++|||+++|+++.+.+ ||+|++|++|+
T Consensus 152 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 231 (255)
T PRK11300 152 GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGT 231 (255)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 68999999999999999999999999999999999999999999987643 7899999999999866 99999999999
Q ss_pred EEEecChhHHhh
Q 000452 1460 IEEYDSPRKLLE 1471 (1495)
Q Consensus 1460 ivE~gsp~~Ll~ 1471 (1495)
+++.|+++++.+
T Consensus 232 i~~~~~~~~~~~ 243 (255)
T PRK11300 232 PLANGTPEEIRN 243 (255)
T ss_pred EEecCCHHHHhh
Confidence 999999999875
No 291
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-38 Score=354.06 Aligned_cols=208 Identities=25% Similarity=0.382 Sum_probs=183.8
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++||+++|+. . ..|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+. .+++++|
T Consensus 2 l~~~~l~~~~~~-~---~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHH-L---PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECC-c---cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 789999999963 2 239999999999999999999999999999999999999999999999887654 3678999
Q ss_pred EcccCcCCCC-cHHHhcCC-CC------CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFEG-TVRSNVDP-LE------EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLdp-~~------~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||+|.+|.+ |+++|+.. +. +..++++.++++.+++.+.+.+.|. .||+|||||++||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~G~~qrv~laral 144 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLPG-----------QLSGGQRQRVALARCL 144 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCcc-----------cCCHHHHHHHHHHHHH
Confidence 9999999986 99999973 21 1224568899999999877666553 6899999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhc
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
+++|+++||||||++||.++...+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999998753 7899999999999865 999999999999999999999854
No 292
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=5.4e-38 Score=354.51 Aligned_cols=207 Identities=26% Similarity=0.366 Sum_probs=173.6
Q ss_pred EEEeeeeEEeCCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCH---HHHh
Q 000452 1248 IDLRDLQVRYAPHM--PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL---HDLR 1322 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~--~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l---~~LR 1322 (1495)
|+++||+++|+... +++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 369999999999999999999999999999999999999999999999999988773 5788
Q ss_pred cccEEEcccC--cCC-CCcHHHhcCC----CC-CCCHHHH----HHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 000452 1323 TRLSIIPQDP--VMF-EGTVRSNVDP----LE-EYTDEQI----WEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1323 ~~isiIpQdp--~LF-~GTIR~NLdp----~~-~~sd~ei----~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
++++|+||+| .++ ..|+++|+.. .. ...+++. .++++..++.+ ........+||+|||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~ 151 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPE----------EVLNRYPHELSGGQR 151 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCCh----------hHhhCCchhcCHHHH
Confidence 9999999999 344 4699999852 11 1122211 25566666532 122334467999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEEec
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~g 1464 (1495)
||++|||||+.+|+||+|||||++||+.+...+.+.|++..+ ++|||+++|+++.+. .||+|++|++|++++.|
T Consensus 152 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 152 QRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999999998754 789999999999987 59999999999998865
No 293
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=7.6e-38 Score=355.56 Aligned_cols=214 Identities=32% Similarity=0.502 Sum_probs=188.5
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC-------------eEE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TKA 684 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g-------------~~a 684 (1495)
++++|+++.|+..+++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4689999999643335799999999999999999999999999999999999999999999987 269
Q ss_pred EEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCE
Q 000452 685 YVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADI 763 (1495)
Q Consensus 685 yv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 763 (1495)
|++|++.+++.|++||+.++.. ...++..+.++.+++.+.++.+|.|.++..+....+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999988999999998754 344556667777888888888998888888999999999999999999999999999
Q ss_pred eEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcC
Q 000452 764 YLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 764 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
+||||||++||+...+.+.+. +....+++|+|++||+++.+..||++++|++|++++.|+.+++....
T Consensus 161 lllDEP~~gLD~~~~~~l~~~-l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 228 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEA-LDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQK 228 (238)
T ss_pred EEEeCccccCCHHHHHHHHHH-HHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcC
Confidence 999999999999998888754 44444789999999999998889999999999999999988876543
No 294
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-38 Score=359.31 Aligned_cols=222 Identities=24% Similarity=0.393 Sum_probs=186.7
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC-----ccEEEEcCEeCCC--CCHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPA-----AGQILIDGIDISL--IGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~-----~G~I~IDG~dI~~--i~l~ 1319 (1495)
.++++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|+ +|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 4789999999964 35999999999999999999999999999999999999874 8999999999975 3455
Q ss_pred HHhcccEEEcccCcCCCC-cHHHhcCC-C--CC-CCHHH----HHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 000452 1320 DLRTRLSIIPQDPVMFEG-TVRSNVDP-L--EE-YTDEQ----IWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~LF~G-TIR~NLdp-~--~~-~sd~e----i~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
.+|++++|+||+|.+|.+ |+++|+.. . .. ..+++ +.+.++..++.+.+ ++.++.+ ..+||+|||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~----~~~LS~G~~ 154 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLKTP----ATGLSGGQQ 154 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhcCC----cccCCHHHH
Confidence 788999999999999985 99999962 1 11 12333 33345556655433 2233433 467999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHH
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~L 1469 (1495)
||++|||||+++|+||||||||++||..+...+.+.|++..+++|+|+++|+++.+.+ ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 155 QRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987677999999999999986 999999999999999999999
Q ss_pred hhcCCChH
Q 000452 1470 LENKSSSF 1477 (1495)
Q Consensus 1470 l~~~~s~f 1477 (1495)
++++...+
T Consensus 235 ~~~~~~~~ 242 (252)
T PRK14272 235 FTNPRDER 242 (252)
T ss_pred HhCcCcHH
Confidence 87655444
No 295
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-38 Score=370.94 Aligned_cols=225 Identities=20% Similarity=0.338 Sum_probs=188.2
Q ss_pred eEEEeeeeEEeCC--CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc----CCccEEEEcCEeCCCCCHHH
Q 000452 1247 KIDLRDLQVRYAP--HMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE----PAAGQILIDGIDISLIGLHD 1320 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~--~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e----p~~G~I~IDG~dI~~i~l~~ 1320 (1495)
-++++|++++|.. +...+|+||||+|++||.+||+|+||||||||+++|.|+.+ |++|+|.+||.|+.+++.++
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4899999999953 22459999999999999999999999999999999999986 58999999999999988776
Q ss_pred Hh----cccEEEcccCc--CCC-CcHHHhcC-CC------CC------CCHHHHHHHHHHcCCcHHHHhccCCccccccc
Q 000452 1321 LR----TRLSIIPQDPV--MFE-GTVRSNVD-PL------EE------YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTE 1380 (1495)
Q Consensus 1321 LR----~~isiIpQdp~--LF~-GTIR~NLd-p~------~~------~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e 1380 (1495)
++ ++|+||||+|. ++. -||.+|+. +. +. ..++++.++|++++|.+.-.. + ..
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~----~----~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDA----M----RS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHH----H----hC
Confidence 53 47999999996 333 48888874 11 10 113567889999999743111 1 12
Q ss_pred CCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeC
Q 000452 1381 NGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSH 1457 (1495)
Q Consensus 1381 ~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~ 1457 (1495)
....||||||||++|||||+.+|+||||||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 2357999999999999999999999999999999999999999999998653 7899999999999965 999999999
Q ss_pred cEEEEecChhHHhhcCCChHHH
Q 000452 1458 GLIEEYDSPRKLLENKSSSFSQ 1479 (1495)
Q Consensus 1458 G~ivE~gsp~~Ll~~~~s~f~~ 1479 (1495)
|+|+|.|+++++++++...|.+
T Consensus 235 G~ive~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 235 GQTVETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred CEEEEECCHHHHHhCCCCHHHH
Confidence 9999999999999776555654
No 296
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-38 Score=353.21 Aligned_cols=200 Identities=26% Similarity=0.428 Sum_probs=173.3
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
++++|++++|.. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 578999999963 459999999999999999999999999999999999999999999999998753 56789999
Q ss_pred EcccCcCCCC-cHHHhcCCCC---CC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFEG-TVRSNVDPLE---EY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLdp~~---~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||+|.+|.+ |+++|+.... .. .++++.++++..++.+...+ ...+||+|||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~la~al 143 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYANK-----------RVEELSKGNQQKVQFIAAV 143 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhC-----------cHhhCCHHHHHHHHHHHHH
Confidence 9999999986 9999985321 11 13456677777777654432 3357999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEec
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1464 (1495)
+++|++|||||||++||+.+...+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|
T Consensus 144 ~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 144 IHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999998864 47899999999999865 9999999999998865
No 297
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.3e-38 Score=373.47 Aligned_cols=212 Identities=26% Similarity=0.409 Sum_probs=184.3
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++||+++|+. ..+|+||||+|++||.+||+||||||||||+++|.|+++|++|+|.|||.|+.+.+ ...|++++
T Consensus 41 ~i~i~nl~k~y~~--~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGD--KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 5999999999964 35999999999999999999999999999999999999999999999999998654 56889999
Q ss_pred EEcccCcCC-CCcHHHhcCCCC---CCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 000452 1327 IIPQDPVMF-EGTVRSNVDPLE---EYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1398 (1495)
Q Consensus 1327 iIpQdp~LF-~GTIR~NLdp~~---~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1398 (1495)
|+||++.+| ..|+++|+..+. ..+. +.+.++++.+++.+. .+..+ .+||+|||||++||||
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~-------~~~~~----~~LS~G~kqrv~lA~a 186 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-------ADARV----SDLSGGMKRRLTLARA 186 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-------hCCCh----hhCCHHHHHHHHHHHH
Confidence 999999987 459999996322 1222 234566777776543 33333 4799999999999999
Q ss_pred HccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhc
Q 000452 1399 LLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1399 LLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
|+.+|++|||||||++||+.+...+.+.|++.. .++|||+++|+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999999864 47999999999999965 999999999999999999999754
No 298
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=4.9e-38 Score=368.93 Aligned_cols=212 Identities=25% Similarity=0.357 Sum_probs=183.0
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999964 3599999999999999999999999999999999999999999999999998764 356789999
Q ss_pred EEcccCcCCC-CcHHHhcCCC---CCCCHH----HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 000452 1327 IIPQDPVMFE-GTVRSNVDPL---EEYTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1398 (1495)
Q Consensus 1327 iIpQdp~LF~-GTIR~NLdp~---~~~sd~----ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1398 (1495)
|+||+|.+|. .|+++|+... ...+++ ++.++++.+++.+. ++..+ ..||||||||++||||
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-------~~~~~----~~LSgG~~qrv~la~a 149 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-------ADVRV----ALLSGGMKRRLTLARA 149 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhH-------hcCch----hhCCHHHHHHHHHHHH
Confidence 9999999885 5999999621 123332 34556777766543 33333 4699999999999999
Q ss_pred HccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhc
Q 000452 1399 LLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1399 LLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
|+++|++|+|||||++||+.+...+.+.|++.. +++|||+++|+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999998864 47899999999999875 999999999999999999999754
No 299
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=4.8e-38 Score=368.38 Aligned_cols=211 Identities=23% Similarity=0.334 Sum_probs=187.3
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
++++|++++|+. ..+|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+ ....+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999964 459999999999999999999999999999999999999999999999999987 44678999999
Q ss_pred EcccCcCCCC-cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFEG-TVRSNVDPLE---EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLdp~~---~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||+|.+|.+ |+++||.... ..+ ++++.++++..++.+...+ ...+||+|||||++|||||
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~la~al 148 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHK-----------KIGQLSKGYRQRVGLAQAL 148 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcC-----------chhhCCHHHHHHHHHHHHH
Confidence 9999999987 9999996321 122 3457778888887655432 2457999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhc
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
+++|++|+|||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||||++|++|++++.|+++++.++
T Consensus 149 ~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 149 IHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999998778999999999998876 999999999999999999998754
No 300
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=8.4e-38 Score=351.34 Aligned_cols=203 Identities=27% Similarity=0.378 Sum_probs=175.4
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHH---Hhcc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD---LRTR 1324 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~---LR~~ 1324 (1495)
|+++|++++|+++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++.+. +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999533 45999999999999999999999999999999999999999999999999998876544 6889
Q ss_pred cEEEcccCcCC-CCcHHHhcCCC---CCCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1325 LSIIPQDPVMF-EGTVRSNVDPL---EEYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1325 isiIpQdp~LF-~GTIR~NLdp~---~~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
++|+||+|.+| ..|+++|+... ...++ +++.++++..++.+...+. ..+||+|||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la 149 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNF-----------PIQLSGGEQQRVGIA 149 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------chhCCHHHHHHHHHH
Confidence 99999999874 66999999632 12333 2466788888876654433 357999999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEE
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEE 1462 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE 1462 (1495)
||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 150 RAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999999864 46899999999999976 89999999999853
No 301
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=5.1e-38 Score=360.68 Aligned_cols=211 Identities=26% Similarity=0.366 Sum_probs=185.8
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 789999999964 359999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EcccCc-CCCCcHHHhcCCCC----C-------CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHH
Q 000452 1328 IPQDPV-MFEGTVRSNVDPLE----E-------YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCL 1395 (1495)
Q Consensus 1328 IpQdp~-LF~GTIR~NLdp~~----~-------~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~L 1395 (1495)
+||+|. .+..|+++|+.... . ..++++.++++++++.+...+ ....||+|||||++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~l 148 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADR-----------DMSTLSGGERQRVHV 148 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHHHHHHHHH
Confidence 999995 45679999995321 0 123467888888888654332 235799999999999
Q ss_pred HHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC-CcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhh
Q 000452 1396 GRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS-DCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1396 ARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~-~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
|||++.+|+++||||||++||+.+...+.+.|++..+ +.|||+++|+++.+. .||+|++|++|++++.|+++++.+
T Consensus 149 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 149 ARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999998643 689999999999995 599999999999999999999864
No 302
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-37 Score=352.53 Aligned_cols=213 Identities=32% Similarity=0.521 Sum_probs=189.4
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 684 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~a 684 (1495)
++++|++++|+.. ++++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4689999999632 247999999999999999999999999999999999999999999999872 68
Q ss_pred EEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCE
Q 000452 685 YVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADI 763 (1495)
Q Consensus 685 yv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 763 (1495)
|++|++++++.|++||+.++.. ...+.+.+.++.+++.+.++.++.|..+..+.++.+||||||||++||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999998753 345566777788888888999988888888999999999999999999999999999
Q ss_pred eEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcC
Q 000452 764 YLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 764 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
+||||||++||+.+.+.+.+ ++....+++|+|++||+++.++.||++++|++|++++.|+++++....
T Consensus 160 llLDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 227 (234)
T cd03251 160 LILDEATSALDTESERLVQA-ALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQG 227 (234)
T ss_pred EEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcC
Confidence 99999999999999888865 555555689999999999998789999999999999999998886543
No 303
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-38 Score=350.58 Aligned_cols=202 Identities=35% Similarity=0.519 Sum_probs=177.3
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------- 682 (1495)
.+++++++|+|+.. .++|+|+|+++++|+.++|+|+||||||||++++.|+++|++|.|.++|.
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 58899999999743 68999999999999999999999999999999999999999999998873
Q ss_pred EEEEccCC--cccCccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 KAYVAQSP--WIQSGKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 ~ayv~Q~~--~l~~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
+|||+|+| .++..||.|.+.||.. .++ ++.+++++.|++.+..+ +...+|||||||||+|
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~-----------r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLD-----------RPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhcc-----------CCccccCCcceeeHHh
Confidence 69999999 5779999999999964 233 45677888888876543 6678999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLN-SKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
|.+|..+|+++|||||||+||+...+.+.+.+.....+ ++|+|++|||++.+.. ||++++|++|+++.+|+++++.+.
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 99999999999999999999999999987644333334 6899999999999876 999999999999999999888754
No 304
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=6.1e-38 Score=350.10 Aligned_cols=201 Identities=24% Similarity=0.387 Sum_probs=177.0
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
++++||+++|+. +++|+||+|++||++||+|++|||||||+++|+|+++|++|+|.+||.|+.+.+ ..|++++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999963 568999999999999999999999999999999999999999999999987643 46888999
Q ss_pred EcccCcCCCC-cHHHhcCC-CC-C-----CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFEG-TVRSNVDP-LE-E-----YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLdp-~~-~-----~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||+|.+|.+ |+++|+.. .. . ..++++.++++..++.+...+.|. +||+|||||++||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----------~LS~G~~qrl~laral 143 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLPE-----------QLSGGQRQRVALARCL 143 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCcc-----------cCCHHHHHHHHHHHHH
Confidence 9999999975 99999862 21 1 134567889999998776655543 6899999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecC
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDS 1465 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gs 1465 (1495)
+++|+|++|||||+++|.++...+.+.|++..+ ++|+|+|||+++.+.+ ||+|++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999998753 7899999999999865 99999999999999874
No 305
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=7.2e-38 Score=372.85 Aligned_cols=204 Identities=22% Similarity=0.307 Sum_probs=177.1
Q ss_pred cceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCE----eCCCCCHHHH---h-cccEEEcccCcC
Q 000452 1263 FVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGI----DISLIGLHDL---R-TRLSIIPQDPVM 1334 (1495)
Q Consensus 1263 ~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~----dI~~i~l~~L---R-~~isiIpQdp~L 1334 (1495)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.|||. |+...+.+.+ | ++++|+||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 4899999999999999999999999999999999999999999999996 6777766554 3 589999999999
Q ss_pred CC-CcHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeE
Q 000452 1335 FE-GTVRSNVDPL---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKIL 1406 (1495)
Q Consensus 1335 F~-GTIR~NLdp~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~IL 1406 (1495)
|+ .|+++|+... ...+ .+++.++++.++|.++....| .+||||||||++|||||+++|+||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 97 6999999632 1122 245678899999876654433 369999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhhcCCChH
Q 000452 1407 MLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLENKSSSF 1477 (1495)
Q Consensus 1407 iLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f 1477 (1495)
|||||||+||+.+...+++.|++..+ ++|+|+|||+++.+. .||||++|++|++++.|+|++++.++...|
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~ 260 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDY 260 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHH
Confidence 99999999999999999999988753 789999999999875 599999999999999999999997654433
No 306
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-37 Score=351.18 Aligned_cols=211 Identities=31% Similarity=0.504 Sum_probs=189.3
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC-------------eE
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------TK 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g-------------~~ 683 (1495)
.++++|++++|+. .+++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 4789999999952 24699999999999999999999999999999999999999999999987 26
Q ss_pred EEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCC
Q 000452 684 AYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDAD 762 (1495)
Q Consensus 684 ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 762 (1495)
+|++|+++++..|++||+.++.+ ...++..+.++.+++.+.++.+|.|..+..+.+..+|||||||||+||||++++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998999999998754 34566777788889998899999898888999999999999999999999999999
Q ss_pred EeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHh
Q 000452 763 IYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 763 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
++||||||++||+.+.+.+++ ++....+++|+|++||+++.++.||++++|++|++.+.|+.+++..
T Consensus 160 llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQE-ALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred EEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 999999999999999888865 4555556899999999999987899999999999999998887754
No 307
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=6.5e-38 Score=352.71 Aligned_cols=209 Identities=24% Similarity=0.347 Sum_probs=182.0
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++|++++|.. .++++|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5999999999963 35999999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEcccCcCCCCcHHHhcCCC----CC-CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 000452 1327 IIPQDPVMFEGTVRSNVDPL----EE-YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1401 (1495)
Q Consensus 1327 iIpQdp~LF~GTIR~NLdp~----~~-~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1401 (1495)
|+||+|.+|+.|+++|+... .. ..++++.++++..++.+.. ......+||+|||||++|||||++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTI----------LTKNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChHH----------hcCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999631 11 2344566788888775321 123456799999999999999999
Q ss_pred CCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhccCEEEEEe-CcEEEEecChh
Q 000452 1402 RRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVIDSDMVLLLS-HGLIEEYDSPR 1467 (1495)
Q Consensus 1402 ~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~~DrIlVL~-~G~ivE~gsp~ 1467 (1495)
+|+++||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+..||+|++|+ ++..+++|+|+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999998653 789999999999998999999995 56667777774
No 308
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=4.1e-38 Score=351.64 Aligned_cols=200 Identities=27% Similarity=0.455 Sum_probs=173.0
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCC--CCHHHHhccc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISL--IGLHDLRTRL 1325 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~--i~l~~LR~~i 1325 (1495)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .....+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 578999999964 359999999999999999999999999999999999999999999999999853 4556788999
Q ss_pred EEEcccCcCCC-CcHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHH
Q 000452 1326 SIIPQDPVMFE-GTVRSNVDPL----EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1326 siIpQdp~LF~-GTIR~NLdp~----~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LA 1396 (1495)
+|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+...+. ..+||+|||||++||
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la 147 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAY-----------PAQLSGGQQQRVAIA 147 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhC-----------ccccCHHHHHHHHHH
Confidence 99999999986 5999999642 1222 23466777777776544333 357999999999999
Q ss_pred HHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEE
Q 000452 1397 RVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLI 1460 (1495)
Q Consensus 1397 RALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~i 1460 (1495)
||++++|++|||||||++||+++.+.+.+.|++.. .++|||+++|+++.+.+ ||+|++|++|++
T Consensus 148 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 148 RALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999999864 47899999999999975 999999999975
No 309
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.6e-37 Score=357.07 Aligned_cols=221 Identities=21% Similarity=0.352 Sum_probs=184.0
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEe-----CCCCCHHH-
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGID-----ISLIGLHD- 1320 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~d-----I~~i~l~~- 1320 (1495)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5999999999964 359999999999999999999999999999999999999999999999999 88776654
Q ss_pred ---HhcccEEEcccCc--CCC-CcHHHhcCC----CCCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCC
Q 000452 1321 ---LRTRLSIIPQDPV--MFE-GTVRSNVDP----LEEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWS 1386 (1495)
Q Consensus 1321 ---LR~~isiIpQdp~--LF~-GTIR~NLdp----~~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS 1386 (1495)
.|+.++|+||+|. ++. .|+++|+.. +.... ++++.++++..++.+ +.....+.+||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS 153 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDA----------ARIDDLPTTFS 153 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCCh----------hHHhCCCccCC
Confidence 3567999999984 343 478888741 12111 234555666665532 12345567899
Q ss_pred chHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEe
Q 000452 1387 MGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEY 1463 (1495)
Q Consensus 1387 ~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1463 (1495)
+|||||++|||||+++|+||||||||++||+.+...+.+.|++..+ +.|||+|+|+++.+.+ ||+|++|++|++++.
T Consensus 154 ~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~ 233 (258)
T PRK11701 154 GGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVES 233 (258)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999987653 7899999999999974 999999999999999
Q ss_pred cChhHHhhcCCChHHH
Q 000452 1464 DSPRKLLENKSSSFSQ 1479 (1495)
Q Consensus 1464 gsp~~Ll~~~~s~f~~ 1479 (1495)
|+++++..++...|.+
T Consensus 234 ~~~~~~~~~~~~~~~~ 249 (258)
T PRK11701 234 GLTDQVLDDPQHPYTQ 249 (258)
T ss_pred CCHHHHhcCCCCHHHH
Confidence 9999998765444543
No 310
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.6e-37 Score=356.01 Aligned_cols=223 Identities=23% Similarity=0.330 Sum_probs=186.4
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC----CccEEEEcCEeCCCCCHHHHh
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP----AAGQILIDGIDISLIGLHDLR 1322 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep----~~G~I~IDG~dI~~i~l~~LR 1322 (1495)
.|+++|++++| . .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 58999999999 2 3599999999999999999999999999999999999999 999999999998632 2234
Q ss_pred cccEEEcccCc-CCC--CcHHHhcCC----C-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 000452 1323 TRLSIIPQDPV-MFE--GTVRSNVDP----L-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1323 ~~isiIpQdp~-LF~--GTIR~NLdp----~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
++++|+||+|. .|. -|+.+|+.. . ....+++++++++.+++.+. ++.+......||+|||||++
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv~ 150 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRMM 150 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHHH
Confidence 67999999995 443 477777531 1 12345678999999988652 11233445689999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
|||||+++|+||||||||++||..+...+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 151 laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 151 IALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999999998753 7899999999999865 99999999999999999999987
Q ss_pred cCCC-hHHHHHH
Q 000452 1472 NKSS-SFSQLVA 1482 (1495)
Q Consensus 1472 ~~~s-~f~~lv~ 1482 (1495)
++.. .++.++.
T Consensus 231 ~~~~~~~~~~~~ 242 (254)
T PRK10418 231 APKHAVTRSLVS 242 (254)
T ss_pred CCCCHHHHHHHH
Confidence 6544 4554554
No 311
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2.4e-37 Score=355.09 Aligned_cols=215 Identities=28% Similarity=0.413 Sum_probs=192.9
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------- 682 (1495)
+.++++|++++|+.. .+++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 18 ~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~ 96 (257)
T cd03288 18 GEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSR 96 (257)
T ss_pred ceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhhh
Confidence 469999999999632 257999999999999999999999999999999999999999999999872
Q ss_pred EEEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCC
Q 000452 683 KAYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDAD 762 (1495)
Q Consensus 683 ~ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 762 (1495)
++|++|+|+++++|++||+........+++.+.++..++.+.++.+|.|.++.+++.+.+||||||||++||||++++|+
T Consensus 97 i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p~ 176 (257)
T cd03288 97 LSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSS 176 (257)
T ss_pred EEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 69999999999999999997654445566777888889999999999999999999999999999999999999999999
Q ss_pred EeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcC
Q 000452 763 IYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 763 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
++||||||++||+++.+.+++ ++....+++|+|++||+++.+..||++++|++|++++.|+++++.+..
T Consensus 177 llllDEPt~gLD~~~~~~l~~-~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~ 245 (257)
T cd03288 177 ILIMDEATASIDMATENILQK-VVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQE 245 (257)
T ss_pred EEEEeCCccCCCHHHHHHHHH-HHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhcc
Confidence 999999999999998777764 455555689999999999998889999999999999999999887643
No 312
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-37 Score=351.58 Aligned_cols=213 Identities=31% Similarity=0.529 Sum_probs=189.0
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 684 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~a 684 (1495)
++++|++++|+. .+++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|. ++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 468999999952 256999999999999999999999999999999999999999999999883 68
Q ss_pred EEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCE
Q 000452 685 YVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADI 763 (1495)
Q Consensus 685 yv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 763 (1495)
|++|++++++.|++||+.++.. ...+...+.++.+++.+.++.+|.|.++.+++++.+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999998753 344456677788889888899999999999999999999999999999999999999
Q ss_pred eEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhcCC
Q 000452 764 YLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINSGT 833 (1495)
Q Consensus 764 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~~~ 833 (1495)
+||||||++||+++.+.+.+ ++....+++|+|++||+.+.+..||++++|++|++...|+.+++.....
T Consensus 159 lllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~ 227 (236)
T cd03253 159 LLLDEATSALDTHTEREIQA-ALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGG 227 (236)
T ss_pred EEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhccc
Confidence 99999999999999888875 4444445899999999999987899999999999999999888766443
No 313
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=8.4e-38 Score=356.39 Aligned_cols=212 Identities=23% Similarity=0.288 Sum_probs=179.1
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc--cCCccEEEEcCEeCCCCCHHHH-hcc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIV--EPAAGQILIDGIDISLIGLHDL-RTR 1324 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--ep~~G~I~IDG~dI~~i~l~~L-R~~ 1324 (1495)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 578999999963 35999999999999999999999999999999999994 7999999999999998887664 456
Q ss_pred cEEEcccCcCCCC-cHHHhcCCC----CC------CC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 000452 1325 LSIIPQDPVMFEG-TVRSNVDPL----EE------YT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1325 isiIpQdp~LF~G-TIR~NLdp~----~~------~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1389 (1495)
++|+||+|.+|.+ |+++|+... .. .+ ++++.++++..++.+.. ++..+. ..||+||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~---~~LS~G~ 149 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEF------LNRSVN---EGFSGGE 149 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhh------cccccc---cCcCHHH
Confidence 9999999999987 899998421 00 11 24567777777775321 122221 2499999
Q ss_pred HHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc--cCEEEEEeCcEEEEecCh
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID--SDMVLLLSHGLIEEYDSP 1466 (1495)
Q Consensus 1390 rQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~--~DrIlVL~~G~ivE~gsp 1466 (1495)
|||++|||||+++|++|||||||++||+.+...+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|++
T Consensus 150 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (243)
T TIGR01978 150 KKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDV 229 (243)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCH
Confidence 999999999999999999999999999999999999999875 47899999999999976 799999999999999999
Q ss_pred hHHh
Q 000452 1467 RKLL 1470 (1495)
Q Consensus 1467 ~~Ll 1470 (1495)
+++-
T Consensus 230 ~~~~ 233 (243)
T TIGR01978 230 ELAK 233 (243)
T ss_pred HHhc
Confidence 8654
No 314
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-37 Score=355.91 Aligned_cols=223 Identities=25% Similarity=0.396 Sum_probs=189.4
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcC------EeCCCCCHHH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDG------IDISLIGLHD 1320 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG------~dI~~i~l~~ 1320 (1495)
.|+++|++++|+. +++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.++| .|+.+.+...
T Consensus 10 ~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~ 87 (257)
T PRK14246 10 VFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIK 87 (257)
T ss_pred heeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHH
Confidence 5999999999964 4599999999999999999999999999999999999999987666654 6777777788
Q ss_pred HhcccEEEcccCcCCCC-cHHHhcCCC----CCCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1321 LRTRLSIIPQDPVMFEG-TVRSNVDPL----EEYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1321 LR~~isiIpQdp~LF~G-TIR~NLdp~----~~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
+|++++|+||+|.+|.+ |+++|+... ...++ +++.++++..++.+.+.. .....+..||+||||
T Consensus 88 ~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~LS~G~~q 160 (257)
T PRK14246 88 LRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYD-------RLNSPASQLSGGQQQ 160 (257)
T ss_pred HhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchh-------hhcCCcccCCHHHHH
Confidence 89999999999999976 999999731 11122 235677788887654311 122345679999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHh
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
|++||||++++|++|+|||||++||..+...+.+.|++..+++|||++||+++.+. .||++++|++|++++.|+++++.
T Consensus 161 rl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~ 240 (257)
T PRK14246 161 RLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIF 240 (257)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999998877899999999999995 59999999999999999999998
Q ss_pred hcCCChHH
Q 000452 1471 ENKSSSFS 1478 (1495)
Q Consensus 1471 ~~~~s~f~ 1478 (1495)
+++...+.
T Consensus 241 ~~~~~~~~ 248 (257)
T PRK14246 241 TSPKNELT 248 (257)
T ss_pred hCCCcHHH
Confidence 76544343
No 315
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-37 Score=370.92 Aligned_cols=212 Identities=22% Similarity=0.381 Sum_probs=186.2
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCC----CHHHHhc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI----GLHDLRT 1323 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~~LR~ 1323 (1495)
|++ |++++|... .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+. .....|+
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 999999642 23 89999999999999999999999999999999999999999999998753 2456788
Q ss_pred ccEEEcccCcCCCC-cHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 000452 1324 RLSIIPQDPVMFEG-TVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1401 (1495)
Q Consensus 1324 ~isiIpQdp~LF~G-TIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1401 (1495)
+++|+||++.+|+. |+++|+... ....++++.++++.+++.+...+.| .+||||||||++|||||++
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRYP-----------GSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCCc-----------ccCCHHHHHHHHHHHHHHc
Confidence 99999999999974 999999742 3345677889999999876655544 4799999999999999999
Q ss_pred CCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCCC
Q 000452 1402 RRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKSS 1475 (1495)
Q Consensus 1402 ~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~s 1475 (1495)
+|++|+|||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++..
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~~ 222 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSAM 222 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcch
Confidence 9999999999999999999999999988754 6899999999998865 999999999999999999999987653
No 316
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=9.1e-38 Score=366.49 Aligned_cols=203 Identities=24% Similarity=0.386 Sum_probs=176.9
Q ss_pred EeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCC
Q 000452 1256 RYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMF 1335 (1495)
Q Consensus 1256 ~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF 1335 (1495)
+|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+.. ....+|++++|+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4643 359999999999999999999999999999999999999999999999999976 3456789999999999999
Q ss_pred CC-cHHHhcCCCC---CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEE
Q 000452 1336 EG-TVRSNVDPLE---EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILM 1407 (1495)
Q Consensus 1336 ~G-TIR~NLdp~~---~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILi 1407 (1495)
.+ |+++|+.... ..+ ++++.++++.+++.+...+ . ..+||||||||++|||||+++|++|+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~----~~~LSgG~~qrv~la~al~~~p~lll 147 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGEAADR-------P----VGTYSGGMRRRLDIAASLIHQPDVLF 147 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCC-------c----hhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 87 9999996421 122 3457788888888654332 2 24799999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhc
Q 000452 1408 LDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1408 LDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
|||||++||+.+...+.+.|++.. +++|||+++|+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 148 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 148 LDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999999998864 47899999999999875 999999999999999999998754
No 317
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.9e-38 Score=362.72 Aligned_cols=213 Identities=29% Similarity=0.484 Sum_probs=189.5
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.|+++||+.+|..+ ..+|+||||+|++||.+|++||||||||||+++|.|+++|++|+|.++|.|...- ....|+++|
T Consensus 4 ~i~~~~l~k~~~~~-~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGGD-KTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCCC-CEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 47889999999742 3599999999999999999999999999999999999999999999999998765 678899999
Q ss_pred EEcccCcCCCC-cHHHhcCCCC-------CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHH
Q 000452 1327 IIPQDPVMFEG-TVRSNVDPLE-------EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRV 1398 (1495)
Q Consensus 1327 iIpQdp~LF~G-TIR~NLdp~~-------~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARA 1398 (1495)
|+||+|.+++. |++|||+.+. +..++++.+.++..+|.+.- +.. ...||+|||||+.||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-------~~~----~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-------NKK----VRTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-------Ccc----hhhcCHHHHHHHHHHHH
Confidence 99999998877 9999997532 12356799999999997621 112 34689999999999999
Q ss_pred HccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC-C-cEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhc
Q 000452 1399 LLKRRKILMLDEATASVDTATDNLIQQSLRQHFS-D-CTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1399 LLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~-~-~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
|+.+|++|||||||++||+.+...+.+.|++..+ + +||++.+|.++.+.. ||||++|++|+++.+|+++++.+.
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999999875 4 799999999999988 999999999999999999998654
No 318
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.8e-37 Score=346.98 Aligned_cols=206 Identities=31% Similarity=0.435 Sum_probs=186.6
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ 683 (1495)
.++++|++++|+.. .+++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 2 DIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred cEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 37899999999632 357999999999999999999999999999999999999999999999873 6
Q ss_pred EEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCE
Q 000452 684 AYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADI 763 (1495)
Q Consensus 684 ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 763 (1495)
+|++|++.+++.|++||+.+......++..+.++..++.+.+..+|.|.++..++.+.+||||||||++||||++.+|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987766667777888899999999999999999999999999999999999999999999999
Q ss_pred eEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecC
Q 000452 764 YLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGK 824 (1495)
Q Consensus 764 llLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~ 824 (1495)
+||||||++||+.+.+.+.+ ++....+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 161 lllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 161 LVLDEATASVDPETDALIQK-TIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999888765 4555556789999999999988899999999999988764
No 319
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-37 Score=369.49 Aligned_cols=203 Identities=30% Similarity=0.416 Sum_probs=174.4
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EEE
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 685 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~ay 685 (1495)
.++++|++++|+ +++++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++|
T Consensus 3 ~l~i~~l~~~~~--~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 80 (356)
T PRK11650 3 GLKLQAVRKSYD--GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAM 80 (356)
T ss_pred EEEEEeEEEEeC--CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 488999999994 1357999999999999999999999999999999999999999999999984 699
Q ss_pred EccCCcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 686 VAQSPWIQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 686 v~Q~~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
|+|++.++. .||+|||.|+.. .+ +++.+++++.++|.+.. .+...+|||||||||+|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LSgGq~QRvalARAL 149 (356)
T PRK11650 81 VFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLL-----------DRKPRELSGGQRQRVAMGRAI 149 (356)
T ss_pred EeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHh-----------hCChhhCCHHHHHHHHHHHHH
Confidence 999999985 699999998753 22 23455667777775433 356689999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHHHHhcC
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLN-SKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
+.+|+++|||||||+||+.+.+++.+.+.....+ +.|+|+||||.+.+. .||+|++|++|++++.|+++++....
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p 226 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKP 226 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCC
Confidence 9999999999999999999999888764433333 899999999999875 49999999999999999999987653
No 320
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.2e-37 Score=367.71 Aligned_cols=202 Identities=26% Similarity=0.393 Sum_probs=171.5
Q ss_pred EEEEeeEEEecCCC-CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 000452 618 IEIADGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------- 682 (1495)
|+++|++++|+..+ ..++|+|+||++++||+++|+||||||||||+++|.|+.+|++|+|.++|.
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 247999999999999999999999999999999999999999999999873
Q ss_pred --EEEEccCCcccC-ccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHH
Q 000452 683 --KAYVAQSPWIQS-GKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQ 752 (1495)
Q Consensus 683 --~ayv~Q~~~l~~-~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 752 (1495)
++|++|++.++. .|++||+.++.. .++ ++..++++..+|.+. ....+.+|||||||||+
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~-----------~~~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDK-----------HDSYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHHHH
Confidence 699999998884 799999988642 222 234455555555432 23667899999999999
Q ss_pred HHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hC-CCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHH
Q 000452 753 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LN-SKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVI 829 (1495)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 829 (1495)
|||||+.+|+++|||||||+||+.+...+.+. +... .+ +.|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~l-L~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILEL-LKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999988764 4443 33 8999999999999865 9999999999999999999987
Q ss_pred hc
Q 000452 830 NS 831 (1495)
Q Consensus 830 ~~ 831 (1495)
..
T Consensus 230 ~~ 231 (343)
T TIGR02314 230 SH 231 (343)
T ss_pred cC
Confidence 54
No 321
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-37 Score=356.81 Aligned_cols=211 Identities=25% Similarity=0.350 Sum_probs=184.7
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC--------ccEEEEcCEeCCCCCHH
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPA--------AGQILIDGIDISLIGLH 1319 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~--------~G~I~IDG~dI~~i~l~ 1319 (1495)
|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRH--RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECC--EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 789999999964 35999999999999999999999999999999999999998 99999999999988888
Q ss_pred HHhcccEEEcccCc-CCCCcHHHhcCCCC--------CC---CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCc
Q 000452 1320 DLRTRLSIIPQDPV-MFEGTVRSNVDPLE--------EY---TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSM 1387 (1495)
Q Consensus 1320 ~LR~~isiIpQdp~-LF~GTIR~NLdp~~--------~~---sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~ 1387 (1495)
.+|+.++|+||++. +|..|+++|+.... .. .++.++++++..++.+.. ......||+
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSg 148 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALV-----------GRDVTTLSG 148 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCH
Confidence 88889999999986 67889999996321 11 234567788888775432 234467999
Q ss_pred hHHHHHHHHHHHc---------cCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEE
Q 000452 1388 GQRQLVCLGRVLL---------KRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLL 1455 (1495)
Q Consensus 1388 GQrQrl~LARALL---------r~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL 1455 (1495)
|||||++|||||+ .+|++|||||||++||+.+...+.+.|++..+ ++|||+|+|+++.+. .||+|++|
T Consensus 149 G~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l 228 (272)
T PRK13547 149 GELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAML 228 (272)
T ss_pred HHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEE
Confidence 9999999999999 59999999999999999999999999998653 689999999999986 59999999
Q ss_pred eCcEEEEecChhHHhh
Q 000452 1456 SHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1456 ~~G~ivE~gsp~~Ll~ 1471 (1495)
++|++++.|+++++++
T Consensus 229 ~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 229 ADGAIVAHGAPADVLT 244 (272)
T ss_pred ECCeEEEecCHHHHcC
Confidence 9999999999999875
No 322
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.4e-37 Score=316.60 Aligned_cols=197 Identities=31% Similarity=0.444 Sum_probs=170.9
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EEEE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 686 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~ayv 686 (1495)
+.++++.|+|... ==..+++|++||++||+||+||||||||++|.|...|.+|+|.++|. ++.+
T Consensus 2 l~L~~V~~~y~~~-----~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSml 76 (231)
T COG3840 2 LALDDVRFSYGHL-----PMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSML 76 (231)
T ss_pred ccccceEEeeCcc-----eEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhh
Confidence 5677889999631 23568999999999999999999999999999999999999999995 4799
Q ss_pred ccCCcccC-ccHHHHHhcCCC-------CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhc
Q 000452 687 AQSPWIQS-GKIEDNILFGKE-------MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALY 758 (1495)
Q Consensus 687 ~Q~~~l~~-~ti~enI~fg~~-------~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 758 (1495)
+|+..+|. -||++||-+|.. .++++.+.+....+|....+.+| .+|||||||||+|||++.
T Consensus 77 FQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvALARclv 145 (231)
T COG3840 77 FQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVALARCLV 145 (231)
T ss_pred hhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHHHHHHh
Confidence 99999985 599999999853 35677888888899988777655 689999999999999999
Q ss_pred cCCCEeEecCcCCccCHHHHHHHHHHHHHHHh--CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 759 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 759 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
++-+|+|||||||||||.-+.+... ++.... ++.|+++|||+++.+.. +|+++++++|+|.++|+.+++...
T Consensus 146 R~~PilLLDEPFsALdP~LR~eMl~-Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 146 REQPILLLDEPFSALDPALRAEMLA-LVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred ccCCeEEecCchhhcCHHHHHHHHH-HHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 9999999999999999998887764 344332 47899999999999875 999999999999999999988754
No 323
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=4.5e-37 Score=354.11 Aligned_cols=221 Identities=20% Similarity=0.297 Sum_probs=186.3
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC---ccEEEEcCEeCCCC-----CH
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPA---AGQILIDGIDISLI-----GL 1318 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~---~G~I~IDG~dI~~i-----~l 1318 (1495)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... ..
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 5899999999963 35999999999999999999999999999999999999986 49999999998754 24
Q ss_pred HHHhcccEEEcccCcCCCC-cHHHhcCCCC---------------CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCC
Q 000452 1319 HDLRTRLSIIPQDPVMFEG-TVRSNVDPLE---------------EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENG 1382 (1495)
Q Consensus 1319 ~~LR~~isiIpQdp~LF~G-TIR~NLdp~~---------------~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G 1382 (1495)
..+|++++|+||+|.+|.+ |+++|+.... +..++++.++++..++.+...+ ..
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~ 150 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQ-----------RV 150 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhC-----------Cc
Confidence 5678899999999998875 9999996210 1123457778888887654433 33
Q ss_pred CCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhh-ccCEEEEEeCcE
Q 000452 1383 ENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVI-DSDMVLLLSHGL 1459 (1495)
Q Consensus 1383 ~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ 1459 (1495)
..||+|||||++||||++.+|++|||||||++||.++...+.+.|++.. .++|||+|+|+++.+. .||+|++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~ 230 (262)
T PRK09984 151 STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGH 230 (262)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 5799999999999999999999999999999999999999999999875 3789999999999865 599999999999
Q ss_pred EEEecChhHHhhcCCChHHHHHHH
Q 000452 1460 IEEYDSPRKLLENKSSSFSQLVAE 1483 (1495)
Q Consensus 1460 ivE~gsp~~Ll~~~~s~f~~lv~~ 1483 (1495)
+++.|+|+++ . +....+++.+
T Consensus 231 i~~~g~~~~~-~--~~~~~~~~~~ 251 (262)
T PRK09984 231 VFYDGSSQQF-D--NERFDHLYRS 251 (262)
T ss_pred EEEeCCHHHh-c--cHHHHHHHhh
Confidence 9999999996 2 2345555443
No 324
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-37 Score=350.39 Aligned_cols=199 Identities=30% Similarity=0.389 Sum_probs=166.8
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------------- 682 (1495)
++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFG---GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 46899999995 357999999999999999999999999999999999999999999999772
Q ss_pred -EEEEccCCcccCc-cHHHHHhcCCC----CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHH
Q 000452 683 -KAYVAQSPWIQSG-KIEDNILFGKE----MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQ 752 (1495)
Q Consensus 683 -~ayv~Q~~~l~~~-ti~enI~fg~~----~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 752 (1495)
++|++|++.++.. |++||+.++.. .++ ++..++++.+++.+. ......+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGA-----------EDLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHH
Confidence 5899999988765 99999987632 222 233445555555332 24566899999999999
Q ss_pred HHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHH
Q 000452 753 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVI 829 (1495)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 829 (1495)
||||++.+|+++||||||++||+.+.+.+++. +... . .++|+|++||+++++.. ||++++|++|++++.|+++++.
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 225 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDL-IRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELR 225 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHc
Confidence 99999999999999999999999998888764 4443 3 38999999999998765 9999999999999999998876
Q ss_pred hc
Q 000452 830 NS 831 (1495)
Q Consensus 830 ~~ 831 (1495)
..
T Consensus 226 ~~ 227 (235)
T cd03261 226 AS 227 (235)
T ss_pred CC
Confidence 43
No 325
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=6.5e-37 Score=343.73 Aligned_cols=205 Identities=36% Similarity=0.538 Sum_probs=182.3
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ 683 (1495)
.++++|+++.|+. ..+++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~~-~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPN-QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCC-CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 3789999999953 2257999999999999999999999999999999999999999999999883 6
Q ss_pred EEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCC
Q 000452 684 AYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDAD 762 (1495)
Q Consensus 684 ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 762 (1495)
+|++|+++++..|++||+.++.. .++++..+.++.+++.+.++..|.|.+|.+.+...+||||||||++||||+..+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 89999999988899999988743 34556778888899998899999999999999999999999999999999999999
Q ss_pred EeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEec
Q 000452 763 IYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAG 823 (1495)
Q Consensus 763 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g 823 (1495)
++||||||++||+.+.+.+++ .+....+++|+|++||+++++..||++++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKE-RLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999888875 455544458999999999988679999999999997653
No 326
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-37 Score=331.66 Aligned_cols=205 Identities=24% Similarity=0.401 Sum_probs=172.9
Q ss_pred cEEEEeeEEEecCCC-CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 000452 617 AIEIADGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------- 682 (1495)
.++++|+++.|+... ..++|+||||++.+||..+|+|++|||||||.++|+|+.+|++|+|.++|+
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 589999999997421 115999999999999999999999999999999999999999999999993
Q ss_pred -EEEEccCCcc---cCccHHHHHhcCC-----CCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 -KAYVAQSPWI---QSGKIEDNILFGK-----EMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 -~ayv~Q~~~l---~~~ti~enI~fg~-----~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
+-+|+|+|.- +..||++-|.-+. +-.+++..++++..+|.+... .+++.+|||||+|||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l----------~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFL----------DRRPHELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHH----------hcCchhcChhHHHHHHH
Confidence 4699999863 3458887775432 223455777888888865432 47788999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
||||..+|+++|||||||+||+.+...|++-+.... ..+-|.|+||||+..+.+ ||||++|++|++++.++.+++...
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 999999999999999999999999999987544322 236799999999999987 999999999999999999998765
No 327
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-37 Score=352.87 Aligned_cols=201 Identities=24% Similarity=0.288 Sum_probs=174.1
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+... +.+++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999964 4599999999999999999999999999999999999999999999999998642 346899
Q ss_pred EcccCcCCC-CcHHHhcCCC---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFE-GTVRSNVDPL---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~-GTIR~NLdp~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+||+|.+|. .|+++|+... ...+ ++++.++++..++.+...+ ...+||||||||++|||||
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qrl~laral 143 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKR-----------YIWQLSGGQRQRVGIARAL 143 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhC-----------ChhhCCHHHHHHHHHHHHH
Confidence 999999887 5999999632 1122 2457788888888654433 2357999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEe--CcEEEEecCh
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLS--HGLIEEYDSP 1466 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~--~G~ivE~gsp 1466 (1495)
+++|++|||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|+ +|++++.+++
T Consensus 144 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 144 AANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999999999999863 37999999999999865 99999998 5999998764
No 328
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=6.3e-37 Score=344.48 Aligned_cols=204 Identities=27% Similarity=0.432 Sum_probs=179.1
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
++++||+++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.... ++++++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 478999999964 35999999999999999999999999999999999999999999999999876422 357999
Q ss_pred EcccCcCCC-CcHHHhcCC---CCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 000452 1328 IPQDPVMFE-GTVRSNVDP---LEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRR 1403 (1495)
Q Consensus 1328 IpQdp~LF~-GTIR~NLdp---~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1403 (1495)
+||+|.+|. .|+++|+.. ....+++++.++++..++.+..... ..+||+|||||++||||++++|
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~~rv~laral~~~p 143 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGKKK-----------AKQFSLGMKQRLGIAIALLNHP 143 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHhhh-----------HhhCCHHHHHHHHHHHHHhcCC
Confidence 999998886 599999863 1234567889999999987654432 2479999999999999999999
Q ss_pred CeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhH
Q 000452 1404 KILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1404 ~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~ 1468 (1495)
++|+|||||++||+.+.+.+.+.|++.. .++|+|++||+++.+. .||+|++|++|++++.|++.+
T Consensus 144 ~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 144 KLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999999998864 4789999999999985 599999999999999999865
No 329
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2.2e-37 Score=347.45 Aligned_cols=202 Identities=24% Similarity=0.337 Sum_probs=176.8
Q ss_pred EEEeeeeEEeCCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHH---HHh
Q 000452 1248 IDLRDLQVRYAPHM--PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH---DLR 1322 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~--~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~---~LR 1322 (1495)
++++|++++|+++. ..+|+|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++..++.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999997532 4699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cccEEEcccCcCCC-CcHHHhcCCCC----CCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 000452 1323 TRLSIIPQDPVMFE-GTVRSNVDPLE----EYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1393 (1495)
Q Consensus 1323 ~~isiIpQdp~LF~-GTIR~NLdp~~----~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl 1393 (1495)
++++|+||+|.+|. .|+.+|+.... ..+. +++.++++++++.+...+.| .+||+|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP-----------HNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHH
Confidence 89999999999987 69999996321 2222 35677888888876665544 47999999999
Q ss_pred HHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhccCEEEEEeCcEE
Q 000452 1394 CLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVIDSDMVLLLSHGLI 1460 (1495)
Q Consensus 1394 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~~DrIlVL~~G~i 1460 (1495)
+||||++++|++|+|||||++||.++.+.+.+.|++..+ ++|+|+|+|+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999988753 7999999999998777999999999986
No 330
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.7e-37 Score=368.25 Aligned_cols=190 Identities=26% Similarity=0.366 Sum_probs=163.5
Q ss_pred CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC-----------------eEEEEccCCcccC
Q 000452 632 HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-----------------TKAYVAQSPWIQS 694 (1495)
Q Consensus 632 ~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g-----------------~~ayv~Q~~~l~~ 694 (1495)
.+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++||+|++++++
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~ 84 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFP 84 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCC
Confidence 35799999999999999999999999999999999999999999999987 3699999999986
Q ss_pred -ccHHHHHhcCCCC---CH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEe
Q 000452 695 -GKIEDNILFGKEM---DR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLF 766 (1495)
Q Consensus 695 -~ti~enI~fg~~~---~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illL 766 (1495)
.||+|||.|+.++ ++ ++..++++..+|+.. .++.+.+|||||||||+|||||+.+|+|+||
T Consensus 85 ~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~-----------~~~~p~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 85 HMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEY-----------EHRYPDELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchh-----------hhCChhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 5999999987542 22 233444555555332 4577889999999999999999999999999
Q ss_pred cCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHHHHhcC
Q 000452 767 DDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 767 Dep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
||||||||+.+++++++.+..... .++|+|+|||+++++. .||+|++|++|++++.|+++++..+.
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p 221 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNP 221 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCc
Confidence 999999999999999877665433 3899999999999865 49999999999999999999987653
No 331
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-37 Score=361.02 Aligned_cols=206 Identities=26% Similarity=0.408 Sum_probs=171.5
Q ss_pred ccEEEEeeEEEecCCC--CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC------------
Q 000452 616 TAIEIADGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------ 681 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g------------ 681 (1495)
..++++|++|+|+... ..++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 4699999999996321 24699999999999999999999999999999999999999999999875
Q ss_pred -----------------eEEEEccCC--cccCccHHHHHhcCCC---CCHH----HHHHHHHHhCcHHHHhhcCCCCccc
Q 000452 682 -----------------TKAYVAQSP--WIQSGKIEDNILFGKE---MDRE----RYNAVLDACSLEKDLEILSFGDQTV 735 (1495)
Q Consensus 682 -----------------~~ayv~Q~~--~l~~~ti~enI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~gd~t~ 735 (1495)
.++||+|+| .+++.|++|||.|+.. .+.+ +.++.++.++|.. ..
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~ 169 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD----------SY 169 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh----------hH
Confidence 158999998 6888999999998742 2222 2333444444421 12
Q ss_pred ccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccc-cCCEEEEE
Q 000452 736 VGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLP-AADLVLVI 814 (1495)
Q Consensus 736 ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~-~~d~i~~l 814 (1495)
.++++.+||||||||++|||||+++|+++||||||++||+.+.+.+++.+.....+++|+|+|||+++.+. .||+|++|
T Consensus 170 ~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl 249 (320)
T PRK13631 170 LERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVM 249 (320)
T ss_pred hcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEE
Confidence 46788999999999999999999999999999999999999988887643332345899999999999875 59999999
Q ss_pred eCCEEEEecChHHHHhc
Q 000452 815 KDGKITQAGKYTDVINS 831 (1495)
Q Consensus 815 ~~G~i~~~g~~~~l~~~ 831 (1495)
++|++++.|+++++...
T Consensus 250 ~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 250 DKGKILKTGTPYEIFTD 266 (320)
T ss_pred ECCEEEEeCCHHHHhcC
Confidence 99999999999988653
No 332
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-37 Score=365.12 Aligned_cols=202 Identities=26% Similarity=0.374 Sum_probs=172.3
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EEE
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 685 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~ay 685 (1495)
.++++|++++|. ++++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++|
T Consensus 6 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 82 (351)
T PRK11432 6 FVVLKNITKRFG---SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICM 82 (351)
T ss_pred EEEEEeEEEEEC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 699999999995 356899999999999999999999999999999999999999999999883 699
Q ss_pred EccCCcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 686 VAQSPWIQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 686 v~Q~~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
|+|++.++. .|++|||.|+.. .+ +++.+++++..++... ..+...+|||||||||+|||||
T Consensus 83 vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~-----------~~r~~~~LSgGq~QRVaLARaL 151 (351)
T PRK11432 83 VFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGF-----------EDRYVDQISGGQQQRVALARAL 151 (351)
T ss_pred EeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHHHHHH
Confidence 999999885 599999999743 22 2344455555555432 2466789999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHHHHhcC
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLN-SKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
+.+|+++|||||||+||+...+.+.+.+.....+ ++|+|+||||.+.+. .||+|++|++|++.+.|+++++....
T Consensus 152 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p 228 (351)
T PRK11432 152 ILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQP 228 (351)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 9999999999999999999999887654332233 799999999999875 49999999999999999999987653
No 333
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2.9e-36 Score=390.59 Aligned_cols=228 Identities=22% Similarity=0.287 Sum_probs=156.6
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHh------ccc---cCCccEEEEcC-------
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLF------RIV---EPAAGQILIDG------- 1310 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~------rl~---ep~~G~I~IDG------- 1310 (1495)
.++++|++. ..|+|+|++|++||.+||+|.+|||||||+.-++ ++. .+..+...++|
T Consensus 614 ~L~v~~l~~-------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 686 (943)
T PRK00349 614 FLKLKGARE-------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKV 686 (943)
T ss_pred eEEecCCcc-------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCce
Confidence 588888852 2699999999999999999999999999998764 211 12233333333
Q ss_pred -----EeCCC---------CC-HHHHhcccEE---------EcccCcCCC-----------CcHHHhcCCCCC-------
Q 000452 1311 -----IDISL---------IG-LHDLRTRLSI---------IPQDPVMFE-----------GTVRSNVDPLEE------- 1348 (1495)
Q Consensus 1311 -----~dI~~---------i~-l~~LR~~isi---------IpQdp~LF~-----------GTIR~NLdp~~~------- 1348 (1495)
.+|.. .+ .+.+|.-++= -++.-.+.. |+++.|+.+..+
T Consensus 687 v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 766 (943)
T PRK00349 687 IDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDV 766 (943)
T ss_pred EEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCcc
Confidence 33221 11 1233443332 223222222 566665543221
Q ss_pred -----------------CCHHH-----HHHHHHHc----CCc---HHHHhccCCccc-ccccCCCCCCchHHHHHHHHHH
Q 000452 1349 -----------------YTDEQ-----IWEALDKC----QLG---DEVRKKEGKLDS-KVTENGENWSMGQRQLVCLGRV 1398 (1495)
Q Consensus 1349 -----------------~sd~e-----i~~aL~~~----~L~---~~v~~lp~gLdt-~v~e~G~nLS~GQrQrl~LARA 1398 (1495)
.+-.| +.++++-. .+. +.+.. -||+. ..+.....||||||||+.|||+
T Consensus 767 C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i~~~l~~L~~--vgL~~l~l~~~~~tLSgGEkQRl~LAra 844 (943)
T PRK00349 767 CKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIARKLQTLVD--VGLGYIKLGQPATTLSGGEAQRVKLAKE 844 (943)
T ss_pred ccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhhhHHHHHHHH--CCCCcccccCCcccCCHHHHHHHHHHHH
Confidence 01111 22222221 010 01111 25554 3566778899999999999999
Q ss_pred HccCC---CeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhccCEEEEE------eCcEEEEecChhH
Q 000452 1399 LLKRR---KILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVIDSDMVLLL------SHGLIEEYDSPRK 1468 (1495)
Q Consensus 1399 LLr~~---~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~~DrIlVL------~~G~ivE~gsp~~ 1468 (1495)
|+++| +++||||||++||.++...+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|++
T Consensus 845 L~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~e 924 (943)
T PRK00349 845 LSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIKTADWIIDLGPEGGDGGGEIVATGTPEE 924 (943)
T ss_pred HhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEecCCcCCCCCEEEEeCCHHH
Confidence 99999 9999999999999999999999998864 478999999999999999999999 7999999999999
Q ss_pred HhhcCCChHHHHHHH
Q 000452 1469 LLENKSSSFSQLVAE 1483 (1495)
Q Consensus 1469 Ll~~~~s~f~~lv~~ 1483 (1495)
+.+++.+.=.+...+
T Consensus 925 l~~~~~s~t~~~l~~ 939 (943)
T PRK00349 925 VAKVEASYTGRYLKP 939 (943)
T ss_pred HHhCcccHHHHHHHH
Confidence 998776655555544
No 334
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=7.5e-37 Score=352.82 Aligned_cols=221 Identities=25% Similarity=0.351 Sum_probs=184.3
Q ss_pred eEEEeeeeEEeCCC-------CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHH
Q 000452 1247 KIDLRDLQVRYAPH-------MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~-------~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~ 1319 (1495)
.|+++||+++|+.+ ..++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++..++..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38999999999741 35699999999999999999999999999999999999999999999999999887653
Q ss_pred ---HHhcccEEEcccCc--CC-CCcHHHhcCC-C---CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCC
Q 000452 1320 ---DLRTRLSIIPQDPV--MF-EGTVRSNVDP-L---EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENW 1385 (1495)
Q Consensus 1320 ---~LR~~isiIpQdp~--LF-~GTIR~NLdp-~---~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nL 1385 (1495)
.+|++++|+||+|. ++ ..|+++|+.. . ...+ ++.+.++++..++... ........|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~----------~~~~~~~~L 152 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDS----------VLDKRPPQL 152 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChh----------HhhCCCccC
Confidence 47889999999983 44 4699999742 1 1111 2245666666655421 123345689
Q ss_pred CchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEE
Q 000452 1386 SMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEE 1462 (1495)
Q Consensus 1386 S~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE 1462 (1495)
|+|||||++|||||+.+|+||||||||++||.++...+.+.|++..+ ++|+|+|+|+++.+.. ||+|++|++|++++
T Consensus 153 S~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~ 232 (268)
T PRK10419 153 SGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVE 232 (268)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEee
Confidence 99999999999999999999999999999999999999999988653 7899999999999975 99999999999999
Q ss_pred ecChhHHhhcCCChHH
Q 000452 1463 YDSPRKLLENKSSSFS 1478 (1495)
Q Consensus 1463 ~gsp~~Ll~~~~s~f~ 1478 (1495)
.|+++++... ++.|.
T Consensus 233 ~g~~~~~~~~-~~~~~ 247 (268)
T PRK10419 233 TQPVGDKLTF-SSPAG 247 (268)
T ss_pred eCChhhccCC-CCHHH
Confidence 9999999854 44444
No 335
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-37 Score=331.30 Aligned_cols=171 Identities=42% Similarity=0.716 Sum_probs=162.1
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+...+.+++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.++|.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 47899999997543469999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEE
Q 000452 1328 IPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILM 1407 (1495)
Q Consensus 1328 IpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILi 1407 (1495)
+||+|.+|++|+++|+ ||+|||||++||||++++|++|+
T Consensus 81 ~~~~~~~~~~t~~e~l-----------------------------------------LS~G~~~rl~la~al~~~p~lll 119 (171)
T cd03228 81 VPQDPFLFSGTIRENI-----------------------------------------LSGGQRQRIAIARALLRDPPILI 119 (171)
T ss_pred EcCCchhccchHHHHh-----------------------------------------hCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 89999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcE
Q 000452 1408 LDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGL 1459 (1495)
Q Consensus 1408 LDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ 1459 (1495)
|||||++||+++...+.+.|++..+++|+|+++|+++.+..||++++|++|+
T Consensus 120 lDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 120 LDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 9999999999999999999998877899999999999998899999999985
No 336
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=5.3e-37 Score=366.88 Aligned_cols=212 Identities=23% Similarity=0.382 Sum_probs=181.9
Q ss_pred eeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCC----HHHHhcccEE
Q 000452 1252 DLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG----LHDLRTRLSI 1327 (1495)
Q Consensus 1252 nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~----l~~LR~~isi 1327 (1495)
|++++|... .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ....|++++|
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 889999642 24 999999999999999999999999999999999999999999999987542 3456889999
Q ss_pred EcccCcCCCC-cHHHhcCCC-CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 000452 1328 IPQDPVMFEG-TVRSNVDPL-EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1401 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLdp~-~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1401 (1495)
+||+|.+|.+ |+++|+... .... ++++.++++..++.+...+. ...||||||||++|||||++
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGqkqRvalAraL~~ 148 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLLGRL-----------PGRLSGGEKQRVAIGRALLS 148 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHhcCC-----------hhhCCHHHHHHHHHHHHHHc
Confidence 9999999976 999999732 2111 23477788888876554433 35799999999999999999
Q ss_pred CCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCCChHH
Q 000452 1402 RRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKSSSFS 1478 (1495)
Q Consensus 1402 ~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~ 1478 (1495)
+|++|+|||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++..++...|.
T Consensus 149 ~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~ 228 (354)
T TIGR02142 149 SPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPWL 228 (354)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCcccc
Confidence 9999999999999999999999999998653 7899999999999875 999999999999999999999987665443
No 337
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-37 Score=330.46 Aligned_cols=170 Identities=31% Similarity=0.520 Sum_probs=157.8
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
++++|++++|+. .++|+|+||+|++||.++|+|++|||||||+++|.|+++|++|+|.+||.++.+.+ .++|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGK--KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 478999999964 25999999999999999999999999999999999999999999999999998766 678899999
Q ss_pred EcccCcCCCC-cHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeE
Q 000452 1328 IPQDPVMFEG-TVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKIL 1406 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~IL 1406 (1495)
+||+|.+|.+ |+++|+. ||+|||||++|||||+++|+||
T Consensus 78 ~~q~~~~~~~~tv~~~~~----------------------------------------LS~G~~qrv~laral~~~p~il 117 (173)
T cd03230 78 LPEEPSLYENLTVRENLK----------------------------------------LSGGMKQRLALAQALLHDPELL 117 (173)
T ss_pred EecCCccccCCcHHHHhh----------------------------------------cCHHHHHHHHHHHHHHcCCCEE
Confidence 9999999987 9999974 8999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhh-ccCEEEEEeCcEE
Q 000452 1407 MLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVI-DSDMVLLLSHGLI 1460 (1495)
Q Consensus 1407 iLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~-~~DrIlVL~~G~i 1460 (1495)
+|||||++||..+...+.+.|++.. ++.|+|+++|+.+.+. .||+|++|++|++
T Consensus 118 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 118 ILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 9999999999999999999999865 3689999999999888 5999999999974
No 338
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.6e-34 Score=319.27 Aligned_cols=502 Identities=17% Similarity=0.154 Sum_probs=337.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCc--chhHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Q 000452 292 IKAMFRSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKRDF--ENEGYAL--VSAFCVAKLVECLCQRFFVFRLE 367 (1495)
Q Consensus 292 ~~al~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~--~~~g~~l--~~~l~~~~~~~~~~~~~~~~~~~ 367 (1495)
.-.++|.+++.++....+.+...+ ++..++-.+-+++-+.... ..-.++. ...++++..+ ++.- ..
T Consensus 4 ll~llr~nr~~~i~~~a~s~a~g~---~g~~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~i---s~lg----~t 73 (546)
T COG4615 4 LLLLLRQNRWPFISVMALSLASGA---LGIGLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLI---SQLG----LT 73 (546)
T ss_pred HHHHhcccccHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHH---HHHH----HH
Confidence 456788888887766555554443 3334444444444332211 1111111 1112222222 2222 22
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcchhcCCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000452 368 QLGIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSWYIHDPWLFLFEVALSFLILYKSLGIASVAA 447 (1495)
Q Consensus 368 ~~g~rir~~L~~~iy~K~L~ls~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~w~~pl~i~~~~~lL~~~lG~~~l~g 447 (1495)
-+|.++-..+...+-+|.+.-+....++.+++.++..++.|+..|.-.+..+.++-.+.+-...++..|++.-+..++..
T Consensus 74 ~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~ 153 (546)
T COG4615 74 TLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLT 153 (546)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 23333444444556677787777777778899999999999999997777777777777767777778887888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccHHH--HHHH-HHHHHHHHHHHHHHHHHHH
Q 000452 448 FFGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELK--FLSK-TIDLRKSESGWLKRCLYTS 524 (1495)
Q Consensus 448 l~~~i~~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ir~IK~~~wE~~--f~~~-i~~~R~~E~~~l~~~~~~~ 524 (1495)
++.+++.+..+.+...+.-++..+..+.-|+-.+..+.++.|-|.+|++.-... +.+. +.+.++.+-. ..+..
T Consensus 154 vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~~r~~----~~~~n 229 (546)
T COG4615 154 VVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQEYRHH----IIRAN 229 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHHHHhh----hhhhh
Confidence 888888888888877777777778888889999999999999999998763322 1111 1112222211 11111
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHhcCCc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 000452 525 SIT-SFVFWCAPTFVSVITFGTCILLKVPL-ESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQ 602 (1495)
Q Consensus 525 ~~~-~~~~~~~p~~v~~~~f~~~~~~~~~L-~~~~vft~lalf~~l~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~ 602 (1495)
.+. ....|....+.+++....|+...-.. +...+.|.....-.++.|+.+....++.+.+|.++++||.++=..|+..
T Consensus 230 ~f~~la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a 309 (546)
T COG4615 230 TFHLLAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKA 309 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccc
Confidence 111 23345555554444433333332222 1224445555566789999999999999999999999999975544332
Q ss_pred cccccCCCCCCCcccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe
Q 000452 603 PDLVEKQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT 682 (1495)
Q Consensus 603 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~ 682 (1495)
.- ...++. ++-..++++|+.|+|... ..-+..||++|++||++.|+|.||||||||++++.|+++|++|+|.+||+
T Consensus 310 ~~-~~~q~~-p~~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~ 385 (546)
T COG4615 310 DF-PRPQAF-PDWKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGK 385 (546)
T ss_pred cC-CCCCcC-CcccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCceeECCc
Confidence 21 111111 123469999999999743 37789999999999999999999999999999999999999999999996
Q ss_pred E-------------EEEccCCcccCccHHHHHhcCCC-CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 683 K-------------AYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 683 ~-------------ayv~Q~~~l~~~ti~enI~fg~~-~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
. +-|+-+-|+|+.++ -+.. -.++..+.-++...+....+ +.+|.-+ ...||.|||
T Consensus 386 pV~~e~ledYR~LfSavFsDyhLF~~ll-----~~e~~as~q~i~~~LqrLel~~kts-l~d~~fs-----~~kLStGQk 454 (546)
T COG4615 386 PVSAEQLEDYRKLFSAVFSDYHLFDQLL-----GPEGKASPQLIEKWLQRLELAHKTS-LNDGRFS-----NLKLSTGQK 454 (546)
T ss_pred cCCCCCHHHHHHHHHHHhhhHhhhHhhh-----CCccCCChHHHHHHHHHHHHhhhhc-ccCCccc-----ccccccchH
Confidence 3 12333344443221 1122 34555666666555544332 2233222 247999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCccccCCEEEEEeCCEEEEe
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPAADLVLVIKDGKITQA 822 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~ 822 (1495)
.|+++--|+.-+.|||+|||=-+--||+-++..++..+-.++ .||||+.||||-.+...|||++.|++|++++.
T Consensus 455 KRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 455 KRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred HHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 999999999999999999999999999999988887764443 59999999999999999999999999999864
No 339
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.1e-36 Score=346.83 Aligned_cols=221 Identities=20% Similarity=0.329 Sum_probs=183.1
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEe-----CCCCCHHH-
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGID-----ISLIGLHD- 1320 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~d-----I~~i~l~~- 1320 (1495)
.|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +..++..+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGG--GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCC--ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 5899999999964 348999999999999999999999999999999999999999999999988 77776543
Q ss_pred ---HhcccEEEcccCc--C-CCCcHHHhcC----CCCC----CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCC
Q 000452 1321 ---LRTRLSIIPQDPV--M-FEGTVRSNVD----PLEE----YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWS 1386 (1495)
Q Consensus 1321 ---LR~~isiIpQdp~--L-F~GTIR~NLd----p~~~----~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS 1386 (1495)
++++++++||+|. + +..|+.+|+. .... ..++++.+.+++.++.+ +.......+||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----------~~~~~~~~~LS 150 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDP----------TRIDDLPRAFS 150 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCCh----------hhhhcCchhcC
Confidence 3467999999985 2 3458888873 1111 12345666666666542 12233456899
Q ss_pred chHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEe
Q 000452 1387 MGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEY 1463 (1495)
Q Consensus 1387 ~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~ 1463 (1495)
+|||||++|||||+++|++|+|||||++||+.+...+.+.|++..+ +.|+|+|+|+++.+.. ||++++|++|++++.
T Consensus 151 gG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~ 230 (253)
T TIGR02323 151 GGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVES 230 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999988643 7899999999999985 999999999999999
Q ss_pred cChhHHhhcCCChHHH
Q 000452 1464 DSPRKLLENKSSSFSQ 1479 (1495)
Q Consensus 1464 gsp~~Ll~~~~s~f~~ 1479 (1495)
|+++++..++...|.+
T Consensus 231 ~~~~~~~~~~~~~~~~ 246 (253)
T TIGR02323 231 GLTDQVLDDPQHPYTQ 246 (253)
T ss_pred CCHHHHhcCCCCHHHH
Confidence 9999998665444543
No 340
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=7.4e-37 Score=363.71 Aligned_cols=202 Identities=33% Similarity=0.407 Sum_probs=173.1
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EEE
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 685 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~ay 685 (1495)
.++++|++++|+ ++++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++|
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~ 80 (353)
T TIGR03265 4 YLSIDNIRKRFG---AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGI 80 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 589999999996 356899999999999999999999999999999999999999999999883 699
Q ss_pred EccCCcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 686 VAQSPWIQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 686 v~Q~~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
|+|++.+|. .|++|||.|+.. .+ +++.+++++..+|.+. ..+++.+|||||||||+|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~-----------~~~~~~~LSgGq~QRvaLARaL 149 (353)
T TIGR03265 81 VFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGS-----------ERKYPGQLSGGQQQRVALARAL 149 (353)
T ss_pred EeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCch-----------hhCChhhCCHHHHHHHHHHHHH
Confidence 999999885 699999999743 22 2344555665555432 2467889999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHHHHhcC
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLN-SKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
+.+|+++|||||||+||+.+.+++.+.+.....+ +.|+|+||||.+++. .||+|++|++|++++.|+++++.+..
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 150 ATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 9999999999999999999998887654433333 789999999999875 49999999999999999999998653
No 341
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-36 Score=355.00 Aligned_cols=202 Identities=26% Similarity=0.440 Sum_probs=171.2
Q ss_pred EEEEeeEEEecCCC--CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 000452 618 IEIADGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------- 682 (1495)
|+++|++|+|+... .+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|.
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999996321 136999999999999999999999999999999999999999999999873
Q ss_pred ----EEEEccCC--cccCccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHH
Q 000452 683 ----KAYVAQSP--WIQSGKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQ 749 (1495)
Q Consensus 683 ----~ayv~Q~~--~l~~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 749 (1495)
++||+|+| .++..|+.||+.|+.. .++ +++.++++..+|.+++ .++.+.+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF----------WEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------ccCCcccCCHHHHH
Confidence 58999998 6788899999998743 222 3455566666664322 24677899999999
Q ss_pred HHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHH
Q 000452 750 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 827 (1495)
|++|||||+.+|+++||||||++||+.+.+.+.+ ++..+ .+|+|||++||+++++. .||+|++|++|++++.|++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~-~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQ-LFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHH-HHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999888875 44444 35899999999999886 499999999999999999999
Q ss_pred HHh
Q 000452 828 VIN 830 (1495)
Q Consensus 828 l~~ 830 (1495)
+..
T Consensus 231 ~~~ 233 (288)
T PRK13643 231 VFQ 233 (288)
T ss_pred HHc
Confidence 864
No 342
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.5e-37 Score=326.88 Aligned_cols=220 Identities=24% Similarity=0.398 Sum_probs=184.9
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHH-Hhccc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD-LRTRL 1325 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i 1325 (1495)
-++++|++..|.+ -.+|+||||++++||.++++||||+|||||+++|+|+.+|.+|+|.++|.||+..+.|+ .|..|
T Consensus 3 mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 3789999999976 35999999999999999999999999999999999999999999999999999999888 58889
Q ss_pred EEEcccCcCCCC-cHHHhcCCCCC-CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 000452 1326 SIIPQDPVMFEG-TVRSNVDPLEE-YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRR 1403 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLdp~~~-~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1403 (1495)
+||||...+|.. ||.|||..... ..+++-++. . -|.+-++---|...-...+.+|||||+|.++|||||..+|
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~-~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~P 155 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----D-LEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRP 155 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccccccccc----c-HHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCC
Confidence 999999999977 99999973211 111111110 0 0111122223444455667899999999999999999999
Q ss_pred CeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhhcC
Q 000452 1404 KILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLENK 1473 (1495)
Q Consensus 1404 ~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~~~ 1473 (1495)
|+|+|||||.+|-|.--+.|.++|++..+ +-||+.|-++..... -+||.+||++|+|+..|++++|++++
T Consensus 156 klLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 156 KLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred CEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 99999999999999999999999998864 459999999998765 59999999999999999999999764
No 343
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=1.2e-36 Score=336.18 Aligned_cols=185 Identities=24% Similarity=0.339 Sum_probs=164.4
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc--ccCCccEEEEcCEeCCCCCHHHH-hcc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRI--VEPAAGQILIDGIDISLIGLHDL-RTR 1324 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl--~ep~~G~I~IDG~dI~~i~l~~L-R~~ 1324 (1495)
++++|++++|+. .++|+|+||+|++||.+||+|++|||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999963 3599999999999999999999999999999999999 58999999999999998876654 567
Q ss_pred cEEEcccCcCCCC-cHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 000452 1325 LSIIPQDPVMFEG-TVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRR 1403 (1495)
Q Consensus 1325 isiIpQdp~LF~G-TIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1403 (1495)
++|+||+|.+|.+ |+++|++ . ...+||+|||||++||||++++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l~------------------------~-----------~~~~LS~G~~qrv~laral~~~p 123 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFLR------------------------Y-----------VNEGFSGGEKKRNEILQLLLLEP 123 (200)
T ss_pred EEEeecChhhccCccHHHHHh------------------------h-----------ccccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999987 6666650 0 11469999999999999999999
Q ss_pred CeEEEEcCCCCCCHHHHHHHHHHHHHhcC-CcEEEEEecCchhhh--ccCEEEEEeCcEEEEecChhHHh
Q 000452 1404 KILMLDEATASVDTATDNLIQQSLRQHFS-DCTVITIAHRITSVI--DSDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1404 ~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~-~~TVI~IAHRl~ti~--~~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
+||+|||||++||..+...+.+.|++..+ ++|+|+++|+++.+. .||+|++|++|++++.| +.++.
T Consensus 124 ~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 124 DLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 99999999999999999999999988643 789999999999998 59999999999999999 66665
No 344
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=355.11 Aligned_cols=203 Identities=25% Similarity=0.425 Sum_probs=171.8
Q ss_pred EEEEeeEEEecCCC--CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 000452 618 IEIADGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------- 682 (1495)
++++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|.
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996322 246999999999999999999999999999999999999999999999873
Q ss_pred ----EEEEccCC--cccCccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHH
Q 000452 683 ----KAYVAQSP--WIQSGKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQ 749 (1495)
Q Consensus 683 ----~ayv~Q~~--~l~~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 749 (1495)
++||+|+| .+++.|++|||.|+.. .+. ++.+++++.++|.+++. ..++.+|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~----------~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL----------ARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh----------hCCcccCCHHHHH
Confidence 58999998 5778899999998732 222 34566677777653331 3567899999999
Q ss_pred HHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChH
Q 000452 750 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 826 (1495)
|++|||||+.+|+++||||||++||+.+...+.+. +..+ . .|.|||++||+++.+.. ||+|++|++|++++.|+++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~-L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEM-FYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999998888754 4444 3 38999999999999765 9999999999999999998
Q ss_pred HHHhc
Q 000452 827 DVINS 831 (1495)
Q Consensus 827 ~l~~~ 831 (1495)
++.+.
T Consensus 232 ~~~~~ 236 (290)
T PRK13634 232 EIFAD 236 (290)
T ss_pred HHhcC
Confidence 87643
No 345
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.3e-36 Score=363.12 Aligned_cols=203 Identities=28% Similarity=0.374 Sum_probs=173.5
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EE
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KA 684 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~a 684 (1495)
..++++|++++|. ++++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++
T Consensus 13 ~~L~l~~l~~~~~---~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 89 (375)
T PRK09452 13 PLVELRGISKSFD---GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVN 89 (375)
T ss_pred ceEEEEEEEEEEC---CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 4589999999995 356899999999999999999999999999999999999999999999984 69
Q ss_pred EEccCCcccC-ccHHHHHhcCCCC---C----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHH
Q 000452 685 YVAQSPWIQS-GKIEDNILFGKEM---D----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARA 756 (1495)
Q Consensus 685 yv~Q~~~l~~-~ti~enI~fg~~~---~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 756 (1495)
||+|++.++. .||+|||.|+... + +++.+++++.+++.+.+ .++..+|||||||||+||||
T Consensus 90 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~p~~LSgGq~QRVaLARa 158 (375)
T PRK09452 90 TVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFA-----------QRKPHQLSGGQQQRVAIARA 158 (375)
T ss_pred EEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHHHHHHHH
Confidence 9999998885 5999999997532 2 23445566666665433 35668999999999999999
Q ss_pred hccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHHHHhcC
Q 000452 757 LYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
|+.+|+++|||||||+||++..+.+.+.+..-.. .+.|+|+||||.+++. .||+|++|++|+|.+.|+++++....
T Consensus 159 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 159 VVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 9999999999999999999998888765433333 3899999999999865 59999999999999999999987654
No 346
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.9e-37 Score=330.50 Aligned_cols=172 Identities=33% Similarity=0.508 Sum_probs=159.4
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCC--HHHHhccc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIG--LHDLRTRL 1325 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~--l~~LR~~i 1325 (1495)
|+++|++++|+. .++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+ ....|+.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 35999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred EEEcccCcCCCC-cHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCC
Q 000452 1326 SIIPQDPVMFEG-TVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRK 1404 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ 1404 (1495)
+|+||+|.+|.+ |+++|+... ||+|||||++|||||+++|+
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~--------------------------------------lS~G~~qr~~la~al~~~p~ 120 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG--------------------------------------LSGGQQQRVALARALAMDPD 120 (178)
T ss_pred EEEecCCccCCCCCHHHheeec--------------------------------------CCHHHHHHHHHHHHHHCCCC
Confidence 999999998865 999998743 89999999999999999999
Q ss_pred eEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcE
Q 000452 1405 ILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGL 1459 (1495)
Q Consensus 1405 ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ 1459 (1495)
+++|||||++||+.+...+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 121 llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 121 VLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999999999999999998754 5899999999999985 99999999985
No 347
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2e-36 Score=345.36 Aligned_cols=208 Identities=28% Similarity=0.412 Sum_probs=180.9
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +..++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 5899999999964 3599999999999999999999999999999999999999999999987 35799
Q ss_pred EEcccCcCCC---CcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 000452 1327 IIPQDPVMFE---GTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRR 1403 (1495)
Q Consensus 1327 iIpQdp~LF~---GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1403 (1495)
|+||+|.++. .|+++|+......+++++.++++.+++.+..... ...||+|||||++||||++++|
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGq~qrv~laral~~~p 139 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHLIDAP-----------MQKLSGGETQRVLLARALLNRP 139 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHHHhCC-----------hhhCCHHHHHHHHHHHHHhcCC
Confidence 9999998765 3899997543345678899999999987665432 3579999999999999999999
Q ss_pred CeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhhcCCChHHHH
Q 000452 1404 KILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLENKSSSFSQL 1480 (1495)
Q Consensus 1404 ~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~l 1480 (1495)
++|+|||||++||+.+...+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++ ++++.|+++++.++ ..|.++
T Consensus 140 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~~--~~~~~~ 216 (251)
T PRK09544 140 QLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSLH--PEFISM 216 (251)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhCC--HHHHHH
Confidence 99999999999999999999999987653 7899999999999865 999999965 79999999998743 445554
Q ss_pred H
Q 000452 1481 V 1481 (1495)
Q Consensus 1481 v 1481 (1495)
.
T Consensus 217 ~ 217 (251)
T PRK09544 217 F 217 (251)
T ss_pred h
Confidence 3
No 348
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-36 Score=344.78 Aligned_cols=198 Identities=32% Similarity=0.445 Sum_probs=167.3
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EEEE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 686 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~ayv 686 (1495)
++++|+++.|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 3 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v 79 (239)
T cd03296 3 IEVRNVSKRFG---DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFV 79 (239)
T ss_pred EEEEeEEEEEC---CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEE
Confidence 78999999995 257999999999999999999999999999999999999999999999872 6899
Q ss_pred ccCCcccC-ccHHHHHhcCCCC-------CH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHH
Q 000452 687 AQSPWIQS-GKIEDNILFGKEM-------DR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIA 754 (1495)
Q Consensus 687 ~Q~~~l~~-~ti~enI~fg~~~-------~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 754 (1495)
+|+|.++. .|++||+.++... +. ++.++.++.+++.+. ......+||||||||++||
T Consensus 80 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la 148 (239)
T cd03296 80 FQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWL-----------ADRYPAQLSGGQRQRVALA 148 (239)
T ss_pred ecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhh-----------hhcChhhCCHHHHHHHHHH
Confidence 99998875 6999999886421 11 223444555555332 2456789999999999999
Q ss_pred HHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hC-CCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000452 755 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LN-SKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
||++.+|+++||||||++||+++.+.+.+ ++... .+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 149 ~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 149 RALAVEPKVLLLDEPFGALDAKVRKELRR-WLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999888875 45444 33 7899999999998765 99999999999999999988754
No 349
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=342.23 Aligned_cols=227 Identities=25% Similarity=0.416 Sum_probs=186.2
Q ss_pred EEEeeeeEEeCCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc-C----CccEEEEcCEeCCCCCHHH
Q 000452 1248 IDLRDLQVRYAPHM--PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE-P----AAGQILIDGIDISLIGLHD 1320 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~--~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e-p----~~G~I~IDG~dI~~i~l~~ 1320 (1495)
++++|+++.|..+. -.+++||||+|++||.+||||.|||||||+.++++|+++ | .+|+|.+||.|+.+++-+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 57899999997643 369999999999999999999999999999999999998 4 5799999999999999875
Q ss_pred Hh----cccEEEcccCcC-CCC--cHHHhcC----CCCCC-C----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCC
Q 000452 1321 LR----TRLSIIPQDPVM-FEG--TVRSNVD----PLEEY-T----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGEN 1384 (1495)
Q Consensus 1321 LR----~~isiIpQdp~L-F~G--TIR~NLd----p~~~~-s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~n 1384 (1495)
+| +.|++|||||.- |+- ||.+-+. -.... + .++..+.|+++++.+--+. +..-...
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~--------~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERR--------LKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHH--------HhhCCcc
Confidence 43 479999999942 221 4444331 11111 1 3467888999998753111 1122357
Q ss_pred CCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeCcEEE
Q 000452 1385 WSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGLIE 1461 (1495)
Q Consensus 1385 LS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~iv 1461 (1495)
||||||||+.||-||+.+|++||-||||++||..+.+.|.+.|++.- .+.|+|+|||++..+.. ||||.||.+|+||
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 89999999999999999999999999999999999999999998876 48999999999999876 9999999999999
Q ss_pred EecChhHHhhcCCChHHHHHH
Q 000452 1462 EYDSPRKLLENKSSSFSQLVA 1482 (1495)
Q Consensus 1462 E~gsp~~Ll~~~~s~f~~lv~ 1482 (1495)
|.|+.+++++++.--|.+..-
T Consensus 234 E~g~~~~i~~~P~HPYT~~Ll 254 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGLL 254 (316)
T ss_pred EeCCHHHHhcCCCChHHHHHH
Confidence 999999999988766665443
No 350
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-37 Score=336.62 Aligned_cols=217 Identities=26% Similarity=0.406 Sum_probs=190.3
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCE---eCCCCCHHHHhc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGI---DISLIGLHDLRT 1323 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~---dI~~i~l~~LR~ 1323 (1495)
.|+++|++..|+.- .+++|||++|+.||.+|+.||||||||||++++.|+..|++|+|.+||. |.+++..+ .+
T Consensus 2 ~i~i~~~~~~~~~~--~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~R 77 (345)
T COG1118 2 SIRINNVKKRFGAF--GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--DR 77 (345)
T ss_pred ceeehhhhhhcccc--cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--hc
Confidence 47788888888643 4899999999999999999999999999999999999999999999999 88874444 46
Q ss_pred ccEEEcccCcCCCC-cHHHhcCCCC---------CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 000452 1324 RLSIIPQDPVMFEG-TVRSNVDPLE---------EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1393 (1495)
Q Consensus 1324 ~isiIpQdp~LF~G-TIR~NLdp~~---------~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl 1393 (1495)
+||+|.||..||.- ||++||.+.- .-.+.++.+.|+.|+|...-+..|. .||||||||+
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP~-----------QLSGGQrQRV 146 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYPA-----------QLSGGQRQRV 146 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCch-----------hcChHHHHHH
Confidence 79999999999865 9999997432 2335567788999999877666654 6799999999
Q ss_pred HHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1394 CLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1394 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
+|||||...|++|+||||.++||.+-.+.+++-+++... ++|++.|||+.+.+.. ||||+||++|+|...|+|+|..
T Consensus 147 ALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 147 ALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 999999999999999999999999999999999887653 7999999999987654 9999999999999999999999
Q ss_pred hcCCChHH
Q 000452 1471 ENKSSSFS 1478 (1495)
Q Consensus 1471 ~~~~s~f~ 1478 (1495)
..+++.|-
T Consensus 227 ~~P~s~fV 234 (345)
T COG1118 227 DHPASRFV 234 (345)
T ss_pred cCCCccce
Confidence 98887763
No 351
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=354.37 Aligned_cols=204 Identities=25% Similarity=0.436 Sum_probs=170.7
Q ss_pred cEEEEeeEEEecCCC--CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC-------------
Q 000452 617 AIEIADGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------- 681 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g------------- 681 (1495)
.++++|+++.|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 378999999996322 24799999999999999999999999999999999999999999999987
Q ss_pred --eEEEEccCC--cccCccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHH
Q 000452 682 --TKAYVAQSP--WIQSGKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQR 750 (1495)
Q Consensus 682 --~~ayv~Q~~--~l~~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 750 (1495)
.++||||+| .+++.|++|||.|+.. .++ ++.+++++.++|. +.+..++.+.+||||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qr 152 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRR 152 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHH
Confidence 258999998 5678899999998642 232 2345556666653 1112356788999999999
Q ss_pred HHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-C-CCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHH
Q 000452 751 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-N-SKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 827 (1495)
++|||||+.+|+++||||||++||+.+..++++ ++..+. + |+|||++||+++++. .||+|++|++|++++.|+.++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEILN-KIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999888875 454443 3 899999999999875 599999999999999999988
Q ss_pred HHh
Q 000452 828 VIN 830 (1495)
Q Consensus 828 l~~ 830 (1495)
+.+
T Consensus 232 ~~~ 234 (287)
T PRK13637 232 VFK 234 (287)
T ss_pred HHh
Confidence 764
No 352
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.2e-36 Score=342.85 Aligned_cols=203 Identities=26% Similarity=0.323 Sum_probs=169.5
Q ss_pred EEEeeeeEEeCCC--CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc---CCccEEEEcCEeCCCCCHHHHh
Q 000452 1248 IDLRDLQVRYAPH--MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE---PAAGQILIDGIDISLIGLHDLR 1322 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~--~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e---p~~G~I~IDG~dI~~i~l~~LR 1322 (1495)
++|+||+++|... .+++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. ..+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~---~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKP---DQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECCh---HHhc
Confidence 5799999999765 3679999999999999999999999999999999999999 999999999998753 4678
Q ss_pred cccEEEcccCcCCCC-cHHHhcCCC---C--CCCHH-----HHHH-HHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 000452 1323 TRLSIIPQDPVMFEG-TVRSNVDPL---E--EYTDE-----QIWE-ALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1323 ~~isiIpQdp~LF~G-TIR~NLdp~---~--~~sd~-----ei~~-aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
++++|+||+|.+|.+ |+++|+... . ...++ .+.+ .++..++.+ .......+||+|||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~ 149 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTR-----------IGGNLVKGISGGER 149 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchh-----------hhcccccCcCHHHH
Confidence 899999999999988 999999631 1 11111 1222 344443322 22334568999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCc-hhh-hccCEEEEEeCcEEEEec
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRI-TSV-IDSDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl-~ti-~~~DrIlVL~~G~ivE~g 1464 (1495)
||++|||||+++|+||||||||++||+.+...+.+.|++.. .++|+|+++|++ ..+ ..||+|++|++|++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999999999998864 478999999998 354 569999999999999875
No 353
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=7.5e-37 Score=314.36 Aligned_cols=193 Identities=26% Similarity=0.392 Sum_probs=168.9
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC----------------
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------------- 681 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g---------------- 681 (1495)
|+++|+++.|+. .+++|+||||+|++||++.|+||||||||||||+|.++.+|++|+|.++|
T Consensus 2 I~f~~V~k~Y~~--g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPG--GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCC--CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 789999999974 36799999999999999999999999999999999999999999999988
Q ss_pred eEEEEccCCcc-cCccHHHHHhcCCCC---C----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 682 TKAYVAQSPWI-QSGKIEDNILFGKEM---D----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 682 ~~ayv~Q~~~l-~~~ti~enI~fg~~~---~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
++|+|+|+.-+ ...||.||+.|.... . +++..++++..+|.+....+| ..|||||||||+|
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 36999999865 577999999997542 2 356667888888887776665 7899999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEec
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAG 823 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g 823 (1495)
|||+..+|+++|-||||-+|||..+..|++-+..-...|.||+++|||.+.+.. --+++.+++|+++...
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999999999999999999999999999986433334569999999999999886 6789999999998643
No 354
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=351.21 Aligned_cols=203 Identities=29% Similarity=0.449 Sum_probs=172.7
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ 683 (1495)
.++++|++++|+....+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 589999999996432346999999999999999999999999999999999999999999999883 5
Q ss_pred EEEccCCc--ccCccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHH
Q 000452 684 AYVAQSPW--IQSGKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIA 754 (1495)
Q Consensus 684 ayv~Q~~~--l~~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 754 (1495)
+|++|+|. ++..|++|||.|+.. .++ ++..++++.++|++.. .+...+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFK-----------EREPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHh-----------hCCcccCCHHHHHHHHHH
Confidence 89999984 567799999998742 222 3456667777775433 355689999999999999
Q ss_pred HHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hC-CCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000452 755 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LN-SKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
||++.+|+++||||||++||+.+.+.+++ ++... .+ |+|+|++||+++.+..||+|++|++|+++..|+++++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIK-TIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 99999999999999999999999888875 45444 33 8999999999998877999999999999999999887654
No 355
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.2e-36 Score=345.19 Aligned_cols=199 Identities=26% Similarity=0.381 Sum_probs=165.5
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------E
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------K 683 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------------~ 683 (1495)
++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFG---GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEEC---CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 46789999995 246999999999999999999999999999999999999999999999872 6
Q ss_pred EEEccCCcccCc-cHHHHHhcCCCC-------------C----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccch
Q 000452 684 AYVAQSPWIQSG-KIEDNILFGKEM-------------D----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSG 745 (1495)
Q Consensus 684 ayv~Q~~~l~~~-ti~enI~fg~~~-------------~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSG 745 (1495)
+|++|++.++.. |++||+.++... + .++.++.++.+++. ...+.+..+|||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSg 146 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLA-----------DLADRPAGELSY 146 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCcc-----------chhhCChhhCCH
Confidence 899999988765 999999876321 0 11223333333332 234577889999
Q ss_pred HHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecC
Q 000452 746 GQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGK 824 (1495)
Q Consensus 746 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~ 824 (1495)
|||||++||||++.+|+++||||||++||+.+.+.+++.+.....+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 147 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (236)
T cd03219 147 GQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGT 226 (236)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecC
Confidence 99999999999999999999999999999999888876443323368999999999999865 99999999999999999
Q ss_pred hHHHHh
Q 000452 825 YTDVIN 830 (1495)
Q Consensus 825 ~~~l~~ 830 (1495)
++++..
T Consensus 227 ~~~~~~ 232 (236)
T cd03219 227 PDEVRN 232 (236)
T ss_pred HHHhcc
Confidence 888753
No 356
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=360.75 Aligned_cols=202 Identities=35% Similarity=0.459 Sum_probs=171.5
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EEE
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 685 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~ay 685 (1495)
.++++|++++|. ++++|+|+||++++||+++|+|||||||||||++|+|+++|++|+|.++|. ++|
T Consensus 2 ~L~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~ 78 (353)
T PRK10851 2 SIEIANIKKSFG---RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGF 78 (353)
T ss_pred EEEEEEEEEEeC---CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEE
Confidence 378999999995 256999999999999999999999999999999999999999999999873 699
Q ss_pred EccCCcccC-ccHHHHHhcCCCC-------C----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 686 VAQSPWIQS-GKIEDNILFGKEM-------D----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 686 v~Q~~~l~~-~ti~enI~fg~~~-------~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
|+|++.++. .|++|||.|+... + +++.++.++..+|.+. ..++..+|||||||||+|
T Consensus 79 v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LSgGq~QRval 147 (353)
T PRK10851 79 VFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHL-----------ADRYPAQLSGGQKQRVAL 147 (353)
T ss_pred EecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHHHHH
Confidence 999999886 5999999987431 2 1244455555555432 246778999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLN-SKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
||||+.+|+++|||||||+||+.+.+.+.+.+.....+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 148 ArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 148 ARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999998887654333333 7899999999998765 999999999999999999999765
Q ss_pred C
Q 000452 832 G 832 (1495)
Q Consensus 832 ~ 832 (1495)
.
T Consensus 228 p 228 (353)
T PRK10851 228 P 228 (353)
T ss_pred c
Confidence 3
No 357
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.2e-36 Score=362.28 Aligned_cols=203 Identities=31% Similarity=0.433 Sum_probs=173.3
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCC--cEEEEcCe-----------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS--GTLKLCGT----------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~--G~v~~~g~----------- 682 (1495)
..++++|++++|. ++++|+|+||++++|++++|+|||||||||||++|+|+.+|++ |+|.++|.
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ 80 (362)
T TIGR03258 4 GGIRIDHLRVAYG---ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRG 80 (362)
T ss_pred eEEEEEEEEEEEC---CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCC
Confidence 3589999999996 2469999999999999999999999999999999999999999 99999883
Q ss_pred EEEEccCCcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHH
Q 000452 683 KAYVAQSPWIQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIA 754 (1495)
Q Consensus 683 ~ayv~Q~~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 754 (1495)
++||+|++.++. .|++|||.|+.. .+ +++.+++++..+|++.. .++..+|||||||||+||
T Consensus 81 ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~-----------~~~~~~LSgGq~QRvaLA 149 (362)
T TIGR03258 81 LALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAA-----------AHLPAQLSGGMQQRIAIA 149 (362)
T ss_pred EEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchh-----------hCChhhCCHHHHHHHHHH
Confidence 699999998885 599999998743 22 23455556665554333 467789999999999999
Q ss_pred HHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhC--CCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 755 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLN--SKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~--~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
|||..+|+++|||||||+||+...+++.+.+.....+ |.|+|+||||++++.. ||+|++|++|++++.|+++++...
T Consensus 150 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 150 RAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred HHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999998887654433333 7899999999998765 999999999999999999999865
Q ss_pred C
Q 000452 832 G 832 (1495)
Q Consensus 832 ~ 832 (1495)
.
T Consensus 230 p 230 (362)
T TIGR03258 230 P 230 (362)
T ss_pred c
Confidence 3
No 358
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=363.39 Aligned_cols=201 Identities=29% Similarity=0.417 Sum_probs=171.8
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EEE
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAY 685 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~ay 685 (1495)
.++++|++++|+ ++++|+|+||++++|++++|+|||||||||||++|+|+++|++|+|.++|. ++|
T Consensus 3 ~l~i~~l~~~~~---~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~ 79 (369)
T PRK11000 3 SVTLRNVTKAYG---DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGM 79 (369)
T ss_pred EEEEEEEEEEeC---CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEE
Confidence 488999999995 256999999999999999999999999999999999999999999999873 699
Q ss_pred EccCCcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 686 VAQSPWIQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 686 v~Q~~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
++|++.++. .|++|||.|+.. .+ +++.+++++.++|.+.. .....+|||||||||+|||||
T Consensus 80 v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-----------~~~~~~LSgGq~QRvaLAraL 148 (369)
T PRK11000 80 VFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLL-----------DRKPKALSGGQRQRVAIGRTL 148 (369)
T ss_pred EeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhh-----------cCChhhCCHHHHHHHHHHHHH
Confidence 999998875 599999998743 22 23455666666665433 356789999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLN-SKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
+.+|+++||||||++||+...+.+.+.+.....+ ++|+|+|||+++++.. ||+|++|++|++.+.|+++++...
T Consensus 149 ~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 149 VAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999988887644332333 8999999999998765 999999999999999999998754
No 359
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-36 Score=349.38 Aligned_cols=208 Identities=26% Similarity=0.335 Sum_probs=176.4
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHh-ccc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLR-TRL 1325 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR-~~i 1325 (1495)
.|+++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..+ +++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~----~~~~~~i 80 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ----ALQKNLV 80 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH----hhccceE
Confidence 59999999999633 459999999999999999999999999999999999999999999999998752 233 469
Q ss_pred EEEcccCcC---CCCcHHHhcCCC--------C---CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHH
Q 000452 1326 SIIPQDPVM---FEGTVRSNVDPL--------E---EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1326 siIpQdp~L---F~GTIR~NLdp~--------~---~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQ 1391 (1495)
+|+||+|.+ +..++++|+... . ...++++.++++..++.+... +. ..+|||||||
T Consensus 81 ~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-------~~----~~~LSgG~~q 149 (272)
T PRK15056 81 AYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRH-------RQ----IGELSGGQKK 149 (272)
T ss_pred EEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhc-------CC----cccCCHHHHH
Confidence 999999965 456899997521 0 112345778889988865543 22 2469999999
Q ss_pred HHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHH
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1392 rl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~L 1469 (1495)
|++|||||+++|+||||||||++||+.+...+.+.|++.. +++|||+|+|+++.+. .||+++++ +|++++.|+++++
T Consensus 150 rv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~ 228 (272)
T PRK15056 150 RVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETT 228 (272)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhc
Confidence 9999999999999999999999999999999999998864 4789999999999875 49999777 8999999999998
Q ss_pred hh
Q 000452 1470 LE 1471 (1495)
Q Consensus 1470 l~ 1471 (1495)
.+
T Consensus 229 ~~ 230 (272)
T PRK15056 229 FT 230 (272)
T ss_pred cC
Confidence 64
No 360
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-36 Score=338.87 Aligned_cols=191 Identities=35% Similarity=0.466 Sum_probs=161.0
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EEEE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 686 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~ayv 686 (1495)
++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v 77 (213)
T cd03259 1 LELKGLSKTYG---SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMV 77 (213)
T ss_pred CeeeeeEEEeC---CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEE
Confidence 46889999995 257999999999999999999999999999999999999999999999873 6899
Q ss_pred ccCCcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhc
Q 000452 687 AQSPWIQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALY 758 (1495)
Q Consensus 687 ~Q~~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 758 (1495)
+|++.++. .|++||+.++.. .+ +++.++.++.+++.+.+ .+...+||||||||++|||||.
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~la~al~ 146 (213)
T cd03259 78 FQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLL-----------NRYPHELSGGQQQRVALARALA 146 (213)
T ss_pred cCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hcChhhCCHHHHHHHHHHHHHh
Confidence 99988774 699999987532 12 22345556666654433 3566899999999999999999
Q ss_pred cCCCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEec
Q 000452 759 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAG 823 (1495)
Q Consensus 759 ~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g 823 (1495)
.+|+++||||||++||+.+.+.+++. +... . .++|+|++||+++++.. ||++++|++|++++.|
T Consensus 147 ~~p~~lllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 147 REPSLLLLDEPLSALDAKLREELREE-LKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999998888754 4443 3 38999999999998765 9999999999998754
No 361
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-36 Score=353.06 Aligned_cols=203 Identities=23% Similarity=0.395 Sum_probs=169.7
Q ss_pred EEEEeeEEEecCCC--CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC--------------
Q 000452 618 IEIADGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------- 681 (1495)
Q Consensus 618 i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g-------------- 681 (1495)
|+++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 78999999996321 13699999999999999999999999999999999999999999998864
Q ss_pred -----------------------eEEEEccCC--cccCccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcC
Q 000452 682 -----------------------TKAYVAQSP--WIQSGKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILS 729 (1495)
Q Consensus 682 -----------------------~~ayv~Q~~--~l~~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~ 729 (1495)
.++||+|+| .++..|++|||.|+.. .++ ++..++++.++|..+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~---- 158 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESY---- 158 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh----
Confidence 158999986 5677899999998742 222 3445566666664222
Q ss_pred CCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCccc-c
Q 000452 730 FGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLP-A 807 (1495)
Q Consensus 730 ~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~-~ 807 (1495)
.++...+||||||||++|||||+.+|+++||||||++||+...+.+.+. +..+ .+|+|||+|||+++++. .
T Consensus 159 ------~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivtHd~~~~~~~ 231 (305)
T PRK13651 159 ------LQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEI-FDNLNKQGKTIILVTHDLDNVLEW 231 (305)
T ss_pred ------hhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeeCHHHHHHh
Confidence 2467789999999999999999999999999999999999998888754 4443 35899999999999875 5
Q ss_pred CCEEEEEeCCEEEEecChHHHHhc
Q 000452 808 ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 808 ~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
||+|++|++|++++.|+++++...
T Consensus 232 adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 232 TKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999987643
No 362
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-36 Score=334.71 Aligned_cols=190 Identities=23% Similarity=0.278 Sum_probs=162.2
Q ss_pred eEEEeeeeEEeCCC--CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcccc---CCccEEEEcCEeCCCCCHHHH
Q 000452 1247 KIDLRDLQVRYAPH--MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVE---PAAGQILIDGIDISLIGLHDL 1321 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~--~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~e---p~~G~I~IDG~dI~~i~l~~L 1321 (1495)
.+.++||+|.|+.. ..++|+|+||+|++||++||+|++|||||||+++|.|+++ |++|+|.+||.++.... ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 46899999999753 4579999999999999999999999999999999999999 89999999999998765 457
Q ss_pred hcccEEEcccCcCCCC-cHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHc
Q 000452 1322 RTRLSIIPQDPVMFEG-TVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLL 1400 (1495)
Q Consensus 1322 R~~isiIpQdp~LF~G-TIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALL 1400 (1495)
|++++|+||++.+|.+ |+++||...... . .+ +....||+|||||++|||||+
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~---------~--------------~~----~~~~~LS~Ge~qrl~laral~ 134 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC---------K--------------GN----EFVRGISGGERKRVSIAEALV 134 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh---------c--------------cc----cchhhCCHHHHHHHHHHHHHh
Confidence 8899999999988875 999999642110 0 12 233579999999999999999
Q ss_pred cCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEe-cCchhh-hccCEEEEEeCcEEEEec
Q 000452 1401 KRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIA-HRITSV-IDSDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1401 r~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IA-HRl~ti-~~~DrIlVL~~G~ivE~g 1464 (1495)
++|+||+|||||+++|+++.+.+.+.|++..+ ++|+|+++ |+.+.+ ..||+|++|++|++++.|
T Consensus 135 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 135 SRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 99999999999999999999999999998754 46766655 555665 469999999999999865
No 363
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-36 Score=339.05 Aligned_cols=200 Identities=24% Similarity=0.350 Sum_probs=170.7
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCC----CHHHHhc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLI----GLHDLRT 1323 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i----~l~~LR~ 1323 (1495)
+++ ||+++|+.. .+ |+||+|++ |++||+|++|||||||+++|.|+++|++|+|.+||.++... +...+|+
T Consensus 2 ~~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 2 LCV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred cee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhh
Confidence 345 899999753 24 99999999 99999999999999999999999999999999999998643 3346788
Q ss_pred ccEEEcccCcCCCC-cHHHhcCCC-CCC----CHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1324 RLSIIPQDPVMFEG-TVRSNVDPL-EEY----TDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1324 ~isiIpQdp~LF~G-TIR~NLdp~-~~~----sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
+++|+||++.+|.+ |+++|+... ..+ .++++.+++++.++.+... ....+||+|||||++|||
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~ 144 (214)
T cd03297 76 KIGLVFQQYALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDHLLN-----------RYPAQLSGGEKQRVALAR 144 (214)
T ss_pred cEEEEecCCccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHhHhh-----------cCcccCCHHHHHHHHHHH
Confidence 99999999999865 999999632 211 2345777888887754433 334679999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEec
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1464 (1495)
|++++|+||||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 145 ALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999998643 7899999999999864 9999999999999875
No 364
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-36 Score=340.17 Aligned_cols=197 Identities=22% Similarity=0.341 Sum_probs=165.5
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC------------eEEE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------TKAY 685 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g------------~~ay 685 (1495)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYG---DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEEC---CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEE
Confidence 46899999995 25799999999999999999999999999999999999999999999987 3689
Q ss_pred EccCCcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 686 VAQSPWIQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 686 v~Q~~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
++|++.++. .|++||+.++.. .+ +++.++.++.+++.+.. .....+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAA-----------DRLVKTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCChhhCCHHHHHHHHHHHHH
Confidence 999998775 599999987421 21 23455666666665433 345679999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHH
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLN-SKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDV 828 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 828 (1495)
+.+|+++||||||++||+++.+.+.+.+.....+ ++|+|++||+++++.. ||++++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999988887544333334 7899999999999875 999999999999998887653
No 365
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=3.9e-36 Score=336.90 Aligned_cols=198 Identities=48% Similarity=0.881 Sum_probs=177.7
Q ss_pred EEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC-----------------
Q 000452 619 EIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG----------------- 681 (1495)
Q Consensus 619 ~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g----------------- 681 (1495)
.+.|++|.|+. ..++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~~~~~~~~--~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGS--GLATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCC--CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 56789999963 25799999999999999999999999999999999999999999999865
Q ss_pred eEEEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCC
Q 000452 682 TKAYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDA 761 (1495)
Q Consensus 682 ~~ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 761 (1495)
.++|++|+|.+++.|++||+.++.+.+.++.+++++.+++.+.++.+|.|+++.+++...+||||||||++||||++.+|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 26899999999999999999987766666778889999999889989999999999999999999999999999999999
Q ss_pred CEeEecCcCCccCHHHHHHHHHH-HHHHHh-CCCEEEEEecCCCccccCCEEEEEeCCE
Q 000452 762 DIYLFDDPFSAVDAHTGSHLFKE-VLLGLL-NSKTVLYVTHQVEFLPAADLVLVIKDGK 818 (1495)
Q Consensus 762 ~illLDep~saLD~~~~~~i~~~-~~~~~~-~~~tvIlvTH~~~~l~~~d~i~~l~~G~ 818 (1495)
+++||||||++||+.+.+.+.+. ++.... .++|+|++||+.+.+..||++++|++|.
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999998888763 444443 3789999999999988899999999873
No 366
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.4e-36 Score=330.53 Aligned_cols=172 Identities=27% Similarity=0.467 Sum_probs=156.9
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCH-HHHhccc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL-HDLRTRL 1325 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l-~~LR~~i 1325 (1495)
.|+++|++++| +|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.+.+. ...|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999999 8999999999999999999999999999999999999999999999999998874 4568899
Q ss_pred EEEcccC----cCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 000452 1326 SIIPQDP----VMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1401 (1495)
Q Consensus 1326 siIpQdp----~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1401 (1495)
+|+||+| .++..|+++|+..... ||+|||||++||||+++
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~------------------------------------LS~G~~qrl~la~al~~ 121 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL------------------------------------LSGGNQQKVVLARWLAR 121 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh------------------------------------cCHHHHHHHHHHHHHcc
Confidence 9999995 3445799999864211 89999999999999999
Q ss_pred CCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEE
Q 000452 1402 RRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLI 1460 (1495)
Q Consensus 1402 ~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~i 1460 (1495)
+|++|+|||||++||+++...+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++
T Consensus 122 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 122 DPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999999864 47999999999999877 999999999975
No 367
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.5e-36 Score=339.69 Aligned_cols=189 Identities=27% Similarity=0.451 Sum_probs=159.5
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------------- 682 (1495)
++++|++++|+.. .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 6899999999522 246999999999999999999999999999999999999999999999873
Q ss_pred -EEEEccCCcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 -KAYVAQSPWIQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 -~ayv~Q~~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
++|++|++.++. .|++||+.++.. .+ +++..++++.+++.+.. .+...+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKA-----------HALPMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHHHHHH
Confidence 589999998875 699999987521 11 23455666666665433 34567999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEE
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKI 819 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i 819 (1495)
|||++++|+++||||||++||+.+.+.+.+. +... .+++|+|++||+++++.. ||++++|++|++
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRL-FEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999998888764 4443 358999999999999875 999999999975
No 368
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=351.62 Aligned_cols=204 Identities=25% Similarity=0.454 Sum_probs=169.5
Q ss_pred cEEEEeeEEEecCCC--CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------
Q 000452 617 AIEIADGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------ 682 (1495)
.++++|++++|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 246999999999999999999999999999999999999999999999872
Q ss_pred -----EEEEccCC--cccCccHHHHHhcCCC---CCHH----HHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 683 -----KAYVAQSP--WIQSGKIEDNILFGKE---MDRE----RYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 683 -----~ayv~Q~~--~l~~~ti~enI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
++||+|+| .++..|++|||.|+.. ++.+ +..+.++.++|..+. .++.+.+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq~ 151 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDV----------MSQSPFQMSGGQM 151 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh----------hhCCcccCCHHHH
Confidence 58999997 5777899999998632 2332 333445555543211 2467889999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh--CCCEEEEEecCCCccc-cCCEEEEEeCCEEEEecCh
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--NSKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKY 825 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~ 825 (1495)
||++|||||+.+|+++||||||++||+.+...+.+ ++..+. .|+|+|++||+++++. .||+|++|++|++++.|++
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~ 230 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMR-LLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSP 230 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999888875 454442 4899999999999875 5999999999999999999
Q ss_pred HHHHhc
Q 000452 826 TDVINS 831 (1495)
Q Consensus 826 ~~l~~~ 831 (1495)
+++.+.
T Consensus 231 ~~~~~~ 236 (286)
T PRK13646 231 KELFKD 236 (286)
T ss_pred HHHHhC
Confidence 887653
No 369
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.8e-36 Score=353.60 Aligned_cols=201 Identities=25% Similarity=0.416 Sum_probs=170.0
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------E
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------K 683 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------~ 683 (1495)
..++++|++++|+ +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 6 ~~i~i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRV 82 (306)
T ss_pred ceEEEEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcE
Confidence 4699999999995 357999999999999999999999999999999999999999999999873 6
Q ss_pred EEEccCCcccC-ccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHH
Q 000452 684 AYVAQSPWIQS-GKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIAR 755 (1495)
Q Consensus 684 ayv~Q~~~l~~-~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 755 (1495)
|||||++.++. .|++||+.|... .+. ++.+++++.+++.+.. ..+..+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKA-----------DAKVGELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHh-----------cCchhhCCHHHHHHHHHHH
Confidence 99999998874 699999975321 122 2334555555554322 3556799999999999999
Q ss_pred HhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 756 ALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 756 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
||+++|++++|||||++||+...+.+++. +..+ .+|+|+|++||+++.++. ||+|++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 99999999999999999999999888764 5444 358999999999999876 999999999999999999998654
No 370
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.8e-36 Score=341.88 Aligned_cols=195 Identities=31% Similarity=0.459 Sum_probs=164.1
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCC-----CCCCcEEEEcCe----------
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEV-----PKISGTLKLCGT---------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~-----~~~~G~v~~~g~---------- 682 (1495)
++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|++ +|++|+|.++|.
T Consensus 1 i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYG---DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcC---CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 46899999995 247999999999999999999999999999999999999 999999999872
Q ss_pred -----EEEEccCCcccCccHHHHHhcCCCC----C----HHHHHHHHHHhCcHHHHhhcCCCCcccccCC--CCccchHH
Q 000452 683 -----KAYVAQSPWIQSGKIEDNILFGKEM----D----RERYNAVLDACSLEKDLEILSFGDQTVVGER--GINLSGGQ 747 (1495)
Q Consensus 683 -----~ayv~Q~~~l~~~ti~enI~fg~~~----~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~--g~~LSGGQ 747 (1495)
++|++|++.+++.|++||+.++... . +++..++++.+++.+.+. ++ +.+|||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~~~LSgG~ 146 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVK-----------DRLHALGLSGGQ 146 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHh-----------ccCCcccCCHHH
Confidence 5899999988888999999875321 1 234455566666644332 23 57999999
Q ss_pred HHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChH
Q 000452 748 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 826 (1495)
|||++||||++.+|+++||||||++||+.+.+.+++ ++....+.+|+|++||+++++.. ||++++|++|++++.|+++
T Consensus 147 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 225 (227)
T cd03260 147 QQRLCLARALANEPEVLLLDEPTSALDPISTAKIEE-LIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTE 225 (227)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcc
Confidence 999999999999999999999999999999888875 45444334899999999998765 9999999999999988765
Q ss_pred H
Q 000452 827 D 827 (1495)
Q Consensus 827 ~ 827 (1495)
+
T Consensus 226 ~ 226 (227)
T cd03260 226 Q 226 (227)
T ss_pred c
Confidence 4
No 371
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.9e-36 Score=332.72 Aligned_cols=182 Identities=27% Similarity=0.394 Sum_probs=161.7
Q ss_pred eEEEeeeeEEeCCC----CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc--cCCccEEEEcCEeCCCCCHHH
Q 000452 1247 KIDLRDLQVRYAPH----MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIV--EPAAGQILIDGIDISLIGLHD 1320 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~----~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--ep~~G~I~IDG~dI~~i~l~~ 1320 (1495)
.|+++||+++|+.. ..++|+|+||+|++||++||+|++|||||||+++|.|++ +|++|+|.+||.++.. .+
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 58999999999752 246999999999999999999999999999999999999 9999999999999875 36
Q ss_pred HhcccEEEcccCcCCCC-cHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1321 LRTRLSIIPQDPVMFEG-TVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1321 LR~~isiIpQdp~LF~G-TIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
+|++++|+||+|.+|.+ |+++|+.... ... .||+|||||++|||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~~------------~~~---------------------~LS~G~~qrv~laral 126 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFAA------------KLR---------------------GLSGGERKRVSIALEL 126 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHHH------------Hhc---------------------cCCHHHHHHHHHHHHH
Confidence 78899999999998875 9999985210 000 6999999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCch-hhh-ccCEEEEEeCcEEEEec
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRIT-SVI-DSDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~-ti~-~~DrIlVL~~G~ivE~g 1464 (1495)
+++|++++|||||++||..+.+.+.+.|++.. +++|+|+|+|+++ .+. .||+|++|++|++++.|
T Consensus 127 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 127 VSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred HcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999865 4789999999997 454 49999999999998764
No 372
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.4e-36 Score=337.64 Aligned_cols=193 Identities=26% Similarity=0.361 Sum_probs=166.0
Q ss_pred EeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCH----HHHhccc
Q 000452 1250 LRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGL----HDLRTRL 1325 (1495)
Q Consensus 1250 f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l----~~LR~~i 1325 (1495)
++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+.. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4789999964 359999999999999999999999999999999999999999999999999875542 3467899
Q ss_pred EEEcccCcCCC-CcHHHhcCCC---C----CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHH
Q 000452 1326 SIIPQDPVMFE-GTVRSNVDPL---E----EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGR 1397 (1495)
Q Consensus 1326 siIpQdp~LF~-GTIR~NLdp~---~----~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LAR 1397 (1495)
+|+||+|.+|. .|+++|+... . ...++++.++++..++.+...+ ...+||+|||||++|||
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~lS~G~~qr~~lar 147 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQ-----------KIYELSGGEQQRVALAR 147 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcC-----------ChhhCCHHHHHHHHHHH
Confidence 99999999997 6999999631 1 1124567788888887554332 23579999999999999
Q ss_pred HHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhccCEEEEE
Q 000452 1398 VLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVIDSDMVLLL 1455 (1495)
Q Consensus 1398 ALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~~DrIlVL 1455 (1495)
||+++|++|||||||++||+++...+.+.|++.. .++|+|+++|+++.+..||+|++|
T Consensus 148 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 148 AILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999999999999865 378999999999988889999986
No 373
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=4.3e-36 Score=344.14 Aligned_cols=212 Identities=21% Similarity=0.283 Sum_probs=179.0
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc--ccCCccEEEEcCEeCCCCCHHHHhc-
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRI--VEPAAGQILIDGIDISLIGLHDLRT- 1323 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl--~ep~~G~I~IDG~dI~~i~l~~LR~- 1323 (1495)
.++++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+ ++|++|+|.+||.++..++.+..++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 4999999999964 3599999999999999999999999999999999998 6899999999999999888766554
Q ss_pred ccEEEcccCcCCCC-cHHHhcCCC-C---------CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCch
Q 000452 1324 RLSIIPQDPVMFEG-TVRSNVDPL-E---------EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1388 (1495)
Q Consensus 1324 ~isiIpQdp~LF~G-TIR~NLdp~-~---------~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~G 1388 (1495)
.++++||+|.+|.+ |+++|+... . +.+ .+++.++|+.+++.+.. ++..+. ..||||
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~---~~LSgG 155 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSF------LSRNVN---EGFSGG 155 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhh------hccccc---cCCCHH
Confidence 58999999999987 889997421 1 011 13456778887775211 222221 249999
Q ss_pred HHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc--cCEEEEEeCcEEEEecC
Q 000452 1389 QRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID--SDMVLLLSHGLIEEYDS 1465 (1495)
Q Consensus 1389 QrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~--~DrIlVL~~G~ivE~gs 1465 (1495)
||||++|||||+++|+||||||||++||.++...+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|+
T Consensus 156 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~ 235 (252)
T CHL00131 156 EKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGD 235 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecC
Confidence 9999999999999999999999999999999999999998865 47999999999999875 89999999999999999
Q ss_pred hhHH
Q 000452 1466 PRKL 1469 (1495)
Q Consensus 1466 p~~L 1469 (1495)
|+.+
T Consensus 236 ~~~~ 239 (252)
T CHL00131 236 AELA 239 (252)
T ss_pred hhhh
Confidence 9844
No 374
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-36 Score=338.87 Aligned_cols=196 Identities=36% Similarity=0.486 Sum_probs=163.8
Q ss_pred EEEEeeEEEecCCC-CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC--------eEEEEcc
Q 000452 618 IEIADGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------TKAYVAQ 688 (1495)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--------~~ayv~Q 688 (1495)
++++|++++|+... .+++|+|+||++++|++++|+||||||||||+++|+|..+|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 46899999996311 14799999999999999999999999999999999999999999999987 3699999
Q ss_pred CCcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccC
Q 000452 689 SPWIQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQD 760 (1495)
Q Consensus 689 ~~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1495)
++.++. .|++||+.++.. .+ .++.++.++.+++.+.+ .....+||||||||++||||++.+
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~la~al~~~ 149 (220)
T cd03293 81 QDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFE-----------NAYPHQLSGGMRQRVALARALAVD 149 (220)
T ss_pred ccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hCCcccCCHHHHHHHHHHHHHHcC
Confidence 998876 699999987532 11 23445566666665433 355679999999999999999999
Q ss_pred CCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCcccc-CCEEEEEe--CCEEEEecCh
Q 000452 761 ADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPA-ADLVLVIK--DGKITQAGKY 825 (1495)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~-~d~i~~l~--~G~i~~~g~~ 825 (1495)
|+++||||||++||+.+.+.+++. +... . .++|+|++||+++++.. ||++++|+ +|++++.++.
T Consensus 150 p~lllLDEPt~~LD~~~~~~~~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 150 PDVLLLDEPFSALDALTREQLQEE-LLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999888764 4443 3 37999999999998764 99999999 7999987764
No 375
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-36 Score=340.38 Aligned_cols=201 Identities=28% Similarity=0.427 Sum_probs=171.7
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ 683 (1495)
.++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSF---GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 488999999995 357999999999999999999999999999999999999999999999873 6
Q ss_pred EEEccCCcccCccHHHHHhcCCCC---CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccC
Q 000452 684 AYVAQSPWIQSGKIEDNILFGKEM---DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQD 760 (1495)
Q Consensus 684 ayv~Q~~~l~~~ti~enI~fg~~~---~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1495)
+|++|++.++..|++||+.++... ..++..+.++.+++..+. ..+.+.+||||||||++||||++.+
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY----------ATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH----------hhCCcccCCHHHHHHHHHHHHHhcC
Confidence 899999999889999999876432 234556666766664322 2356789999999999999999999
Q ss_pred CCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 761 ADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
|+++||||||++||+.+.+.+.+ ++... . .|+|+|++||+++++.. ||+|++|++|++++.|+.+++...
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEE-LIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 99999999999999999888765 44443 3 38999999999999875 999999999999999999888653
No 376
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.4e-36 Score=342.21 Aligned_cols=197 Identities=33% Similarity=0.467 Sum_probs=166.0
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------------- 682 (1495)
++++|++++|+. ++++|+|+||++++|++++|+||||||||||+++|+|..+|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 678999999951 357999999999999999999999999999999999999999999999872
Q ss_pred -EEEEccCCcccC-ccHHHHHhcCCCC---------------CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccch
Q 000452 683 -KAYVAQSPWIQS-GKIEDNILFGKEM---------------DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSG 745 (1495)
Q Consensus 683 -~ayv~Q~~~l~~-~ti~enI~fg~~~---------------~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSG 745 (1495)
++|++|++.++. .|++||+.++... ++++..++++.+++.+.+ ...+.+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKA-----------YQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCH
Confidence 589999998775 6999999875310 122344555555554332 466789999
Q ss_pred HHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEe
Q 000452 746 GQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQA 822 (1495)
Q Consensus 746 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~ 822 (1495)
|||||++||||++.+|+++||||||++||+.+.+.+.+ ++... . .++|+|++||+++++.. ||++++|++|++++.
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~ 227 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMD-YLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFD 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEec
Confidence 99999999999999999999999999999999888865 44444 3 37899999999999864 999999999999999
Q ss_pred cChHHH
Q 000452 823 GKYTDV 828 (1495)
Q Consensus 823 g~~~~l 828 (1495)
|+++++
T Consensus 228 ~~~~~~ 233 (243)
T TIGR02315 228 GAPSEL 233 (243)
T ss_pred CCHHHh
Confidence 998875
No 377
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=3.2e-36 Score=322.48 Aligned_cols=164 Identities=28% Similarity=0.367 Sum_probs=151.2
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+.+ +++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999644 45999999999999999999999999999999999999999999999983 68999
Q ss_pred EcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEE
Q 000452 1328 IPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILM 1407 (1495)
Q Consensus 1328 IpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILi 1407 (1495)
+||+|.++++|+++|+... ....||+|||||++||||++++|++++
T Consensus 69 ~~q~~~~~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~ll 114 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVF 114 (166)
T ss_pred ECCCCccccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999999642 235799999999999999999999999
Q ss_pred EEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhccCEEEEEeCcE
Q 000452 1408 LDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGL 1459 (1495)
Q Consensus 1408 LDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~~DrIlVL~~G~ 1459 (1495)
|||||+++|.++...+.+.|++. ++|+|++||+++....||+|++|++|-
T Consensus 115 lDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 115 LDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred EECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 99999999999999999999986 689999999999888899999998863
No 378
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.9e-36 Score=334.39 Aligned_cols=191 Identities=26% Similarity=0.385 Sum_probs=164.6
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EEEE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 686 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~ayv 686 (1495)
++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|. ++|+
T Consensus 1 l~~~~l~~~~~---~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 77 (208)
T cd03268 1 LKTNDLTKTYG---KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGAL 77 (208)
T ss_pred CEEEEEEEEEC---CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEe
Confidence 46899999995 357999999999999999999999999999999999999999999999873 6899
Q ss_pred ccCCccc-CccHHHHHhcCC---CCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCC
Q 000452 687 AQSPWIQ-SGKIEDNILFGK---EMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDAD 762 (1495)
Q Consensus 687 ~Q~~~l~-~~ti~enI~fg~---~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 762 (1495)
+|++.++ +.|++||+.++. ..++++.+++++..++.+.. .+.+.+||||||||++||||++.+|+
T Consensus 78 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al~~~p~ 146 (208)
T cd03268 78 IEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSA-----------KKKVKGFSLGMKQRLGIALALLGNPD 146 (208)
T ss_pred cCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHH-----------hhhHhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999876 579999997753 23455667777777776543 35678999999999999999999999
Q ss_pred EeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEec
Q 000452 763 IYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAG 823 (1495)
Q Consensus 763 illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g 823 (1495)
++||||||++||+.+.+.+.+. +... .+++|+|++||+++++.. ||++++|++|++++.|
T Consensus 147 llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 147 LLILDEPTNGLDPDGIKELREL-ILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999998888764 4443 358999999999999865 9999999999998754
No 379
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-36 Score=332.29 Aligned_cols=181 Identities=24% Similarity=0.326 Sum_probs=160.6
Q ss_pred eEEEeeeeEEeCCC--CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc--cCCccEEEEcCEeCCCCCHHHHh
Q 000452 1247 KIDLRDLQVRYAPH--MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIV--EPAAGQILIDGIDISLIGLHDLR 1322 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~--~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--ep~~G~I~IDG~dI~~i~l~~LR 1322 (1495)
.|+++|++++|+++ ..++|+|+||+|++||++||+|++|||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 58999999999752 246999999999999999999999999999999999986 489999999999986 5678
Q ss_pred cccEEEcccCcCCCC-cHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 000452 1323 TRLSIIPQDPVMFEG-TVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1401 (1495)
Q Consensus 1323 ~~isiIpQdp~LF~G-TIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1401 (1495)
++++++||+|.+|.+ |+++|+... ..++ +||+|||||++||||+++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~---------~~~~------------------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFS---------ALLR------------------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHH---------HHHh------------------------cCCHHHhHHHHHHHHHhc
Confidence 899999999988876 999998621 0000 799999999999999999
Q ss_pred CCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchh--hhccCEEEEEeC-cEEEEec
Q 000452 1402 RRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITS--VIDSDMVLLLSH-GLIEEYD 1464 (1495)
Q Consensus 1402 ~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~t--i~~~DrIlVL~~-G~ivE~g 1464 (1495)
+|++|+|||||+++|.++...+.+.|++.. .++|+|+|+|+++. ...||+|++|++ |++++.|
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999999999999999999864 47999999999984 466999999999 9999875
No 380
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-36 Score=348.02 Aligned_cols=198 Identities=31% Similarity=0.449 Sum_probs=169.5
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ 683 (1495)
.++++|++++|+. .+++|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 5899999999952 346999999999999999999999999999999999999999999999883 6
Q ss_pred EEEccCC--cccCccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHH
Q 000452 684 AYVAQSP--WIQSGKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIA 754 (1495)
Q Consensus 684 ayv~Q~~--~l~~~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 754 (1495)
+|++|+| .++..|++||+.|+.. .+ +++++++++.++|.+.. .....+||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFR-----------DKPPYHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHh-----------cCChhhCCHHHHHHHHHH
Confidence 9999998 5778899999998642 22 23456667777775433 345679999999999999
Q ss_pred HHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHHH
Q 000452 755 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTDV 828 (1495)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l 828 (1495)
|||+.+|+++||||||++||+.+...+.+. +... .+|+|+|++||+++++. .||+|++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEI-LDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999998888754 4444 35899999999999985 5999999999999999998654
No 381
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-36 Score=342.34 Aligned_cols=199 Identities=31% Similarity=0.426 Sum_probs=165.1
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------------- 682 (1495)
++++|++++|+. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 468899999952 257999999999999999999999999999999999999999999999872
Q ss_pred -EEEEccCCcccC-ccHHHHHhcCCC------------CC---HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccch
Q 000452 683 -KAYVAQSPWIQS-GKIEDNILFGKE------------MD---RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSG 745 (1495)
Q Consensus 683 -~ayv~Q~~~l~~-~ti~enI~fg~~------------~~---~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSG 745 (1495)
++|++|++.++. .|++||+.++.. .. .++..+.++.+++.+ ....++.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-----------KAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-----------hhCCCcccCCH
Confidence 689999988765 699999987531 11 123334445444432 23467789999
Q ss_pred HHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCccc-cCCEEEEEeCCEEEEec
Q 000452 746 GQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLP-AADLVLVIKDGKITQAG 823 (1495)
Q Consensus 746 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g 823 (1495)
|||||++||||++.+|+++||||||++||+.+.+.+++.+..... .|+|+|++||+++.+. .||++++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 999999999999999999999999999999998888764433223 3899999999999987 59999999999999999
Q ss_pred ChHHHH
Q 000452 824 KYTDVI 829 (1495)
Q Consensus 824 ~~~~l~ 829 (1495)
+++++.
T Consensus 228 ~~~~~~ 233 (241)
T cd03256 228 PPAELT 233 (241)
T ss_pred CHHHhh
Confidence 988763
No 382
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.8e-36 Score=334.80 Aligned_cols=187 Identities=31% Similarity=0.510 Sum_probs=159.5
Q ss_pred EEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe----------EEEEccC
Q 000452 620 IADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT----------KAYVAQS 689 (1495)
Q Consensus 620 ~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~----------~ayv~Q~ 689 (1495)
++|++++|+. .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|++|+
T Consensus 2 ~~~l~~~~~~--~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q~ 79 (205)
T cd03226 2 IENISFSYKK--GTEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQD 79 (205)
T ss_pred cccEEEEeCC--cCceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEecC
Confidence 5788999952 157999999999999999999999999999999999999999999999873 6899999
Q ss_pred C--cccCccHHHHHhcCCC---CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEe
Q 000452 690 P--WIQSGKIEDNILFGKE---MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIY 764 (1495)
Q Consensus 690 ~--~l~~~ti~enI~fg~~---~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~il 764 (1495)
| .+++.|++||+.++.. .++++.+++++.+++.+.+ .....+||||||||++||||++.+|+++
T Consensus 80 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~laral~~~p~ll 148 (205)
T cd03226 80 VDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALK-----------ERHPLSLSGGQKQRLAIAAALLSGKDLL 148 (205)
T ss_pred hhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhc-----------CCCchhCCHHHHHHHHHHHHHHhCCCEE
Confidence 7 4667899999988643 2234667777777775433 3556799999999999999999999999
Q ss_pred EecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEE
Q 000452 765 LFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKIT 820 (1495)
Q Consensus 765 lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~ 820 (1495)
||||||++||+.+.+.+.+ ++... .+++|+|++||+++.+.. ||++++|++|+++
T Consensus 149 llDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 149 IFDEPTSGLDYKNMERVGE-LIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEeCCCccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999888865 45444 468999999999999875 9999999999874
No 383
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=3.3e-36 Score=340.17 Aligned_cols=206 Identities=23% Similarity=0.322 Sum_probs=171.7
Q ss_pred ceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC----CccEEEEcCEeCCCCCHHHHhcccEEEcccCc-CC-C-
Q 000452 1264 VLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP----AAGQILIDGIDISLIGLHDLRTRLSIIPQDPV-MF-E- 1336 (1495)
Q Consensus 1264 vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep----~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~-LF-~- 1336 (1495)
+|+|+||+|++||++||+|++|||||||+++|.|+++| ++|+|.+||.++... ...+++++|+||+|. .| +
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 58999999999999999999999999999999999999 899999999998754 223468999999995 34 3
Q ss_pred CcHHHhcCC----CCC---CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEE
Q 000452 1337 GTVRSNVDP----LEE---YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLD 1409 (1495)
Q Consensus 1337 GTIR~NLdp----~~~---~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLD 1409 (1495)
-|+.+|+.. ... ..++++.++++.+++.+. +........+||+|||||++||||++++|+|||||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLD 150 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQARALILEALEAVGLPDP--------EEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIAD 150 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCch--------HHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 488888631 111 123458888999888631 11223344679999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhhcCCChHHH
Q 000452 1410 EATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQ 1479 (1495)
Q Consensus 1410 EaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~~~~s~f~~ 1479 (1495)
|||++||..+...+.+.|++..+ ++|||+++|+++.+. .||+|++|++|++++.|++++++..+...|.+
T Consensus 151 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 223 (230)
T TIGR02770 151 EPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETTR 223 (230)
T ss_pred CCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHHH
Confidence 99999999999999999998653 789999999999986 49999999999999999999998765555544
No 384
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-36 Score=357.57 Aligned_cols=202 Identities=27% Similarity=0.397 Sum_probs=169.8
Q ss_pred EEEEeeEEEecCCC-CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC---------------
Q 000452 618 IEIADGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 681 (1495)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--------------- 681 (1495)
++++|++++|+..+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 35799999999999999999999999999999999999999999999987
Q ss_pred -eEEEEccCCcccC-ccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHH
Q 000452 682 -TKAYVAQSPWIQS-GKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQ 752 (1495)
Q Consensus 682 -~~ayv~Q~~~l~~-~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 752 (1495)
.++|++|++.++. .|++||+.++.. .+. ++..+.++..+|.+. ......+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDK-----------ADRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHHHH
Confidence 2689999998875 699999987632 222 233444555554322 34567899999999999
Q ss_pred HHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHH
Q 000452 753 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVI 829 (1495)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 829 (1495)
|||||+++|+++||||||++||+.+.+.+.+. +... . .|+|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILEL-LKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVF 229 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999998888764 4443 3 38999999999999875 9999999999999999999987
Q ss_pred hc
Q 000452 830 NS 831 (1495)
Q Consensus 830 ~~ 831 (1495)
..
T Consensus 230 ~~ 231 (343)
T PRK11153 230 SH 231 (343)
T ss_pred hC
Confidence 54
No 385
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=5.2e-36 Score=336.44 Aligned_cols=198 Identities=23% Similarity=0.439 Sum_probs=167.5
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------EEE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KAY 685 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------~ay 685 (1495)
++++|+++.|+.. .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEE
Confidence 4689999999631 257999999999999999999999999999999999999999999999874 589
Q ss_pred EccCCccc-CccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 686 VAQSPWIQ-SGKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 686 v~Q~~~l~-~~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
++|++.++ ..|++||+.++.. .. .++.+++++.+++.+.. .....+||||||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-----------NKRARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hChhhhCCHHHHHHHHHHHHH
Confidence 99999887 6799999987421 22 23455667766665433 345679999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHH
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDV 828 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 828 (1495)
+.+|+++||||||++||+.+.+.+.+ .+....+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWD-LILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHH-HHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999888875 45555557999999999999865 999999999999999988764
No 386
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=3.3e-36 Score=337.52 Aligned_cols=190 Identities=33% Similarity=0.458 Sum_probs=158.2
Q ss_pred EEEEeeEEEecCCC-CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC---------------
Q 000452 618 IEIADGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 681 (1495)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--------------- 681 (1495)
++++|++++|+... .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46899999996321 15799999999999999999999999999999999999999999999876
Q ss_pred --eEEEEccCCcccCc-cHHHHHhcCCCC---C----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHH
Q 000452 682 --TKAYVAQSPWIQSG-KIEDNILFGKEM---D----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRI 751 (1495)
Q Consensus 682 --~~ayv~Q~~~l~~~-ti~enI~fg~~~---~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 751 (1495)
.++|++|++.++.. |++||+.++..+ + +++.+++++.+++++. ..+.+.+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDR-----------LNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchh-----------hhcChhhcCHHHHHHH
Confidence 26899999988765 999999886432 1 2344555555555432 2466789999999999
Q ss_pred HHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh--CCCEEEEEecCCCccccCCEEEEEeCCEE
Q 000452 752 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--NSKTVLYVTHQVEFLPAADLVLVIKDGKI 819 (1495)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvIlvTH~~~~l~~~d~i~~l~~G~i 819 (1495)
+||||++.+|+++||||||++||+.+.+.+.+ ++.... +++|+|++||+++.+..||++++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVME-LLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999888875 454443 38999999999998878999999999974
No 387
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=6.5e-36 Score=341.50 Aligned_cols=204 Identities=29% Similarity=0.423 Sum_probs=170.6
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCC-----CcEEEEcCe---------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKI-----SGTLKLCGT--------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~-----~G~v~~~g~--------- 682 (1495)
+++++|++++|+ +.++++|+||++++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.
T Consensus 1 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~ 77 (247)
T TIGR00972 1 AIEIENLNLFYG---EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDV 77 (247)
T ss_pred CEEEEEEEEEEC---CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccch
Confidence 378999999996 246999999999999999999999999999999999999998 999998762
Q ss_pred ------EEEEccCCcccCccHHHHHhcCCC----CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 683 ------KAYVAQSPWIQSGKIEDNILFGKE----MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 683 ------~ayv~Q~~~l~~~ti~enI~fg~~----~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
++|+||++++++.|++||+.++.. .+. ++.+++++..++.++++ ...+..+.+||||||
T Consensus 78 ~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~ 150 (247)
T TIGR00972 78 VELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQ 150 (247)
T ss_pred HHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHH
Confidence 689999999988999999987532 121 23445555555542221 123567889999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 827 (1495)
||++||||++.+|+++||||||++||+.+...+++ ++....+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 151 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 229 (247)
T TIGR00972 151 QRLCIARALAVEPEVLLLDEPTSALDPIATGKIEE-LIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQ 229 (247)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999888865 55555556899999999998765 99999999999999999988
Q ss_pred HHhc
Q 000452 828 VINS 831 (1495)
Q Consensus 828 l~~~ 831 (1495)
+...
T Consensus 230 ~~~~ 233 (247)
T TIGR00972 230 IFTN 233 (247)
T ss_pred HHhC
Confidence 7643
No 388
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-36 Score=358.58 Aligned_cols=203 Identities=28% Similarity=0.410 Sum_probs=172.6
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EE
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KA 684 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~a 684 (1495)
..++++|++++|. +.++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++
T Consensus 18 ~~l~l~~v~~~~~---~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig 94 (377)
T PRK11607 18 PLLEIRNLTKSFD---GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPIN 94 (377)
T ss_pred ceEEEEeEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 4699999999995 246999999999999999999999999999999999999999999999984 68
Q ss_pred EEccCCcccC-ccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHH
Q 000452 685 YVAQSPWIQS-GKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARA 756 (1495)
Q Consensus 685 yv~Q~~~l~~-~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 756 (1495)
||+|++-++. .|+.|||.|+.. .++ ++.+++++..++.+. ...+..+|||||||||+||||
T Consensus 95 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~-----------~~~~~~~LSgGq~QRVaLARA 163 (377)
T PRK11607 95 MMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEF-----------AKRKPHQLSGGQRQRVALARS 163 (377)
T ss_pred EEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHHHHH
Confidence 9999999886 599999998743 222 234455555555432 246678999999999999999
Q ss_pred hccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHHHHhcC
Q 000452 757 LYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~~ 832 (1495)
|+.+|+++|||||||+||+...+.+.+.+..... .+.|+|+||||.+++. .||++++|++|++++.|+++++....
T Consensus 164 L~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 164 LAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 9999999999999999999998888765443333 3799999999999865 59999999999999999999998653
No 389
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=3.7e-36 Score=326.67 Aligned_cols=177 Identities=32% Similarity=0.491 Sum_probs=161.5
Q ss_pred EEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEE
Q 000452 1249 DLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSII 1328 (1495)
Q Consensus 1249 ~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiI 1328 (1495)
+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 57899999964 4599999999999999999999999999999999999999999999999999998888889999999
Q ss_pred cccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEE
Q 000452 1329 PQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILML 1408 (1495)
Q Consensus 1329 pQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiL 1408 (1495)
|| +++.+++.+.+.+ .+.+||+|||||++||||++++|+++||
T Consensus 79 ~q--------------------------~l~~~gl~~~~~~-----------~~~~LS~G~~qrl~laral~~~p~llll 121 (180)
T cd03214 79 PQ--------------------------ALELLGLAHLADR-----------PFNELSGGERQRVLLARALAQEPPILLL 121 (180)
T ss_pred HH--------------------------HHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99 7888888765543 3457999999999999999999999999
Q ss_pred EcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhh-ccCEEEEEeCcEEEEec
Q 000452 1409 DEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVI-DSDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1409 DEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~g 1464 (1495)
||||++||.++...+.+.|++..+ ++|+|+++|+++.+. .||++++|++|++++.|
T Consensus 122 DEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 122 DEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999988754 789999999999985 59999999999998754
No 390
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=9.2e-36 Score=335.79 Aligned_cols=204 Identities=28% Similarity=0.459 Sum_probs=175.2
Q ss_pred cccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------
Q 000452 615 ETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1495)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------ 682 (1495)
...++++|++++|+..+..++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|.
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 35699999999996432347999999999999999999999999999999999999999999999873
Q ss_pred -EEEEccCCcccCccHHHHHhcCCCC-CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccC
Q 000452 683 -KAYVAQSPWIQSGKIEDNILFGKEM-DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQD 760 (1495)
Q Consensus 683 -~ayv~Q~~~l~~~ti~enI~fg~~~-~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1495)
++|++|++.++..|++||+.++... ....+.+..+...+.+.++.++.|..+..++++.+|||||||||+||||++++
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~ 168 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRN 168 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 6999999999989999999886532 22333333444566777888887777778899999999999999999999999
Q ss_pred CCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEE
Q 000452 761 ADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKI 819 (1495)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i 819 (1495)
|+++||||||++||+++.+.+.+ .+....+++|+|++||+++++..||+|++|++|++
T Consensus 169 p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 169 PQVLILDEATSALDAESEQQVQQ-ALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCEEEEeCCcccCCHHHHHHHHH-HHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999888865 45555557899999999999877999999999974
No 391
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-36 Score=343.05 Aligned_cols=205 Identities=27% Similarity=0.420 Sum_probs=171.6
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCC-----CCCcEEEEcC---------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG--------- 681 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~-----~~~G~v~~~g--------- 681 (1495)
..++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+ |++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (253)
T PRK14242 5 PKMEARGLSFFYG---DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD 81 (253)
T ss_pred cEEEEeeeEEEEC---CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC
Confidence 3699999999995 2469999999999999999999999999999999999864 5899999877
Q ss_pred ------eEEEEccCCcccCccHHHHHhcCCC---C-C----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHH
Q 000452 682 ------TKAYVAQSPWIQSGKIEDNILFGKE---M-D----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQ 747 (1495)
Q Consensus 682 ------~~ayv~Q~~~l~~~ti~enI~fg~~---~-~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 747 (1495)
.++|++|++.+++.|++||+.++.. . + +++.++.++.+++.+.+. +..++.+.+|||||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq 154 (253)
T PRK14242 82 VVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGGQ 154 (253)
T ss_pred HHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHHH
Confidence 2689999999888899999987531 1 1 234455566666543222 23457788999999
Q ss_pred HHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChH
Q 000452 748 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 826 (1495)
||||+||||++.+|+++||||||++||+.+...+.+ .+....+++|+|++||+++++.. ||++++|++|++++.|+++
T Consensus 155 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 233 (253)
T PRK14242 155 QQRLCIARALAVEPEVLLMDEPASALDPIATQKIEE-LIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTE 233 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999888865 45555567899999999999865 9999999999999999998
Q ss_pred HHHhc
Q 000452 827 DVINS 831 (1495)
Q Consensus 827 ~l~~~ 831 (1495)
++.+.
T Consensus 234 ~~~~~ 238 (253)
T PRK14242 234 QIFTR 238 (253)
T ss_pred HHHcC
Confidence 87643
No 392
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.2e-37 Score=318.96 Aligned_cols=216 Identities=25% Similarity=0.395 Sum_probs=185.6
Q ss_pred ceEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHH-Hhcc
Q 000452 1246 GKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD-LRTR 1324 (1495)
Q Consensus 1246 g~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~ 1324 (1495)
+.+..+|+..+|... .|++||||++++||.||+.||+||||||.+.++.|++.|++|+|.+||.||+.++.+. -|-.
T Consensus 3 ~~L~a~~l~K~y~kr--~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKKR--KVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCCe--eeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 467889999999754 5999999999999999999999999999999999999999999999999999999887 4677
Q ss_pred cEEEcccCcCCCC-cHHHhcCCCCCCC---------HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHH
Q 000452 1325 LSIIPQDPVMFEG-TVRSNVDPLEEYT---------DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVC 1394 (1495)
Q Consensus 1325 isiIpQdp~LF~G-TIR~NLdp~~~~s---------d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~ 1394 (1495)
|||+||||.+|.+ ||++||...-+.. .+++.+.|+..++... + ...|..||||||+|+-
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hl-r----------~~~a~sLSGGERRR~E 149 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHL-R----------DSKAYSLSGGERRRVE 149 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHH-h----------cCcccccccchHHHHH
Confidence 9999999999988 9999996432221 1224445555554322 2 2346789999999999
Q ss_pred HHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCch-hhhccCEEEEEeCcEEEEecChhHHhhc
Q 000452 1395 LGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRIT-SVIDSDMVLLLSHGLIEEYDSPRKLLEN 1472 (1495)
Q Consensus 1395 LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~-ti~~~DrIlVL~~G~ivE~gsp~~Ll~~ 1472 (1495)
|||||..+|+.++||||.|++||.+-..||+.|+... ++--|++.-|... |+.-|||.+++.+|+|...|+|+++.+|
T Consensus 150 IARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 150 IARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred HHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 9999999999999999999999999999999998875 4678999999985 6777999999999999999999999987
Q ss_pred CC
Q 000452 1473 KS 1474 (1495)
Q Consensus 1473 ~~ 1474 (1495)
+.
T Consensus 230 ~~ 231 (243)
T COG1137 230 ED 231 (243)
T ss_pred hh
Confidence 53
No 393
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=6e-36 Score=336.40 Aligned_cols=197 Identities=27% Similarity=0.467 Sum_probs=163.6
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------E
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------K 683 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------------~ 683 (1495)
++++|++++|+ ++++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYG---KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecC---CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 46899999995 247999999999999999999999999999999999999999999999872 6
Q ss_pred EEEccCCcccCc-cHHHHHhcCCCCC-----HHHHHHHHHHh-CcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHH
Q 000452 684 AYVAQSPWIQSG-KIEDNILFGKEMD-----RERYNAVLDAC-SLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARA 756 (1495)
Q Consensus 684 ayv~Q~~~l~~~-ti~enI~fg~~~~-----~~~~~~vl~~~-~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 756 (1495)
+|++|++.++.. |++||+.++.... .++.+++++.+ ++. ...+.++.+||||||||++||||
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~-----------~~~~~~~~~LS~G~~qrv~lara 146 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFPRLK-----------ERRKQLAGTLSGGEQQMLAIARA 146 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhh-----------hhhhCchhhCCHHHHHHHHHHHH
Confidence 899999988765 9999998864321 11223333332 121 12346788999999999999999
Q ss_pred hccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHH
Q 000452 757 LYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVI 829 (1495)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 829 (1495)
+..+|+++||||||++||+.+.+.+.+. +.... +++|+|++||+++.+.. ||++++|++|++.+.|+.+++.
T Consensus 147 l~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 147 LMSRPKLLLLDEPSEGLAPKIVEEIFEA-IRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HhcCCCEEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999998888764 44433 58999999999998765 9999999999999999887764
No 394
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=8.8e-36 Score=338.07 Aligned_cols=199 Identities=26% Similarity=0.449 Sum_probs=167.8
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------EEE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KAY 685 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------~ay 685 (1495)
++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|. ++|
T Consensus 2 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYG---ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGV 78 (236)
T ss_pred EEEEeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEE
Confidence 68899999995 357999999999999999999999999999999999999999999999873 689
Q ss_pred EccCCcc-cCccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 686 VAQSPWI-QSGKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 686 v~Q~~~l-~~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
++|++.+ +..|++||+.++.. ... ++..+.++..++.+ ..++++.+||||||||++||||+
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~G~~qrl~laral 147 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAE-----------RADDKVRELNGGHRRRVEIARAL 147 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhcCChhhCCHHHHHHHHHHHHH
Confidence 9999877 56799999976532 222 22334444444432 24567789999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh--CCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--NSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
+.+|+++||||||++||+.+.+.+.+. +.... +++|+|++||+++.+..||++++|++|++++.|+++++.+.
T Consensus 148 ~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 148 LHRPALLLLDEPTVGLDPASRAAIVAH-VRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 999999999999999999999888764 44443 48999999999999878999999999999999998887654
No 395
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=7e-36 Score=338.16 Aligned_cols=198 Identities=26% Similarity=0.419 Sum_probs=165.5
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------E
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------K 683 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------------~ 683 (1495)
++++|+++.|+ ++++|+|+||++++|++++|+||||||||||+++|+|..+|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYG---KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeC---CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 46899999995 346999999999999999999999999999999999999999999999772 6
Q ss_pred EEEccCCcccCc-cHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHH
Q 000452 684 AYVAQSPWIQSG-KIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIAR 755 (1495)
Q Consensus 684 ayv~Q~~~l~~~-ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 755 (1495)
+|++|++.++.. |++||+.++.+ ... ++.++.++..++.+ ...+...+||||||||++|||
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~ 146 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITH-----------LRKSKASSLSGGERRRVEIAR 146 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHHHHHH
Confidence 899999988765 99999987532 111 22334444444432 235677899999999999999
Q ss_pred HhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000452 756 ALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 756 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
|++.+|+++||||||++||+.+.+.+.+ ++... .+++|+|++||+++.+.. ||++++|++|++.+.|+.+++..
T Consensus 147 al~~~p~llllDEPt~~LD~~~~~~~~~-~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 147 ALATNPKFLLLDEPFAGVDPIAVQDIQK-IIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred HHhcCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 9999999999999999999999888876 44444 358999999999988765 99999999999999999887653
No 396
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=2.7e-35 Score=335.53 Aligned_cols=175 Identities=21% Similarity=0.330 Sum_probs=131.0
Q ss_pred EeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccC-cCCCCcHHHhcCCCC--
Q 000452 1271 TFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDP-VMFEGTVRSNVDPLE-- 1347 (1495)
Q Consensus 1271 ~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp-~LF~GTIR~NLdp~~-- 1347 (1495)
+|..||.+||+||+|-||||++++|.|.++|++|+ ..+ -+++|=||-- .-|+|||++-|.-..
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~----------~~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EED----------LKVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Ccc----------ceEeecceeecCCCCCcHHHHHHHhhhh
Confidence 45567899999999999999999999999999998 222 2589999964 348999988764211
Q ss_pred CCCHHHHHH-HHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHH
Q 000452 1348 EYTDEQIWE-ALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQS 1426 (1495)
Q Consensus 1348 ~~sd~ei~~-aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~ 1426 (1495)
.+.+.-.+. ..+ |-.++-.+...-.+|||||.||+++|-||.|++++.+||||+|.||.+..-.+-++
T Consensus 429 ~~~~s~~~~ei~~-----------pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakv 497 (591)
T COG1245 429 AFGSSYFKTEIVK-----------PLNLEDLLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKV 497 (591)
T ss_pred hcccchhHHhhcC-----------ccchHHHHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHH
Confidence 122222211 112 33333333344457999999999999999999999999999999999999999999
Q ss_pred HHHhc--CCcEEEEEecCchhhhc-cCEEEEEeC--cEEEEecChhHHh
Q 000452 1427 LRQHF--SDCTVITIAHRITSVID-SDMVLLLSH--GLIEEYDSPRKLL 1470 (1495)
Q Consensus 1427 Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~--G~ivE~gsp~~Ll 1470 (1495)
||+.. .++|.++|-|++-.+.. +||++|.+. |+=-....|..+.
T Consensus 498 IRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~GePg~~g~a~~P~~mr 546 (591)
T COG1245 498 IRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEGEPGKHGHASPPMSMR 546 (591)
T ss_pred HHHHHhhcCceEEEEecceehhhhhhceEEEEecCCCccCcCCCCccHH
Confidence 98754 57899999999988865 999999963 2222233455554
No 397
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-36 Score=344.52 Aligned_cols=199 Identities=30% Similarity=0.485 Sum_probs=169.3
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------E
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------K 683 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------------~ 683 (1495)
++++|++++|+. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 689999999952 346999999999999999999999999999999999999999999999872 5
Q ss_pred EEEccCCc--ccCccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHH
Q 000452 684 AYVAQSPW--IQSGKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIA 754 (1495)
Q Consensus 684 ayv~Q~~~--l~~~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 754 (1495)
+|++|+|. +++.|++|||.++.. .+ .++.+++++.+++.... ...+.+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYR-----------HRSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHh-----------cCCcccCCHHHHHHHHHH
Confidence 89999986 467899999988642 22 23445556666665433 356789999999999999
Q ss_pred HHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHh
Q 000452 755 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
||++.+|+++||||||++||+.+...+++. +..+ .+|+|+|++||+++.++.||++++|++|++++.|+.+++..
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLER-IKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999998888764 4443 35899999999999987799999999999999999988754
No 398
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=7.4e-36 Score=350.50 Aligned_cols=202 Identities=25% Similarity=0.403 Sum_probs=168.8
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------E
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------K 683 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------~ 683 (1495)
..++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~~i~~~~l~~~~~---~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i 79 (303)
T TIGR01288 3 VAIDLVGVSKSYG---DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAI 79 (303)
T ss_pred cEEEEEeEEEEeC---CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcE
Confidence 4689999999995 356999999999999999999999999999999999999999999999873 6
Q ss_pred EEEccCCccc-CccHHHHHhcC-C--CCCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHH
Q 000452 684 AYVAQSPWIQ-SGKIEDNILFG-K--EMDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIAR 755 (1495)
Q Consensus 684 ayv~Q~~~l~-~~ti~enI~fg-~--~~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 755 (1495)
+|+||++.++ ..|++||+.+. . ..+. ++.+++++.+++.+. ...+..+||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-----------~~~~~~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADVRVALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhH-----------hcCchhhCCHHHHHHHHHHH
Confidence 8999999887 46999999742 1 1222 233344555555332 23566799999999999999
Q ss_pred HhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 756 ALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 756 Al~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
|++.+|+++||||||++||+.+.+.+.+.+.....+|+|+|++||+++++.. ||++++|++|+++..|+++++...
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999888876443333458999999999999865 999999999999999999988643
No 399
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=344.50 Aligned_cols=202 Identities=31% Similarity=0.480 Sum_probs=172.6
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ 683 (1495)
.++++|+++.|+. ..+++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|. +
T Consensus 5 ~l~~~~l~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPD-AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCC-CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 5899999999953 2357999999999999999999999999999999999999999999999883 5
Q ss_pred EEEccCC--cccCccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHH
Q 000452 684 AYVAQSP--WIQSGKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIA 754 (1495)
Q Consensus 684 ayv~Q~~--~l~~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 754 (1495)
+|++|+| .+++.|++|||.++.. .++ ++.+++++.++|.+.++ ....+||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLN-----------REPHRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhh-----------CCcccCCHHHHHHHHHH
Confidence 8999998 4567899999988632 222 34566677777765443 55679999999999999
Q ss_pred HHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-C-CCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000452 755 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-N-SKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
||++.+|+++||||||++||+.+.+.+++. +.... + ++|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLET-VRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999888764 44443 3 7999999999998878999999999999999999887643
No 400
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.4e-36 Score=337.71 Aligned_cols=201 Identities=30% Similarity=0.453 Sum_probs=167.0
Q ss_pred EEEEeeEEEecCCC-CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 000452 618 IEIADGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------- 682 (1495)
++++|++++|+... ..++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 68899999996321 127999999999999999999999999999999999999999999998763
Q ss_pred --EEEEccCCcccC-ccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHH
Q 000452 683 --KAYVAQSPWIQS-GKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQ 752 (1495)
Q Consensus 683 --~ayv~Q~~~l~~-~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 752 (1495)
++|++|++.++. .|++||+.++.. .+. ++..+.++..++.+. ......+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDK-----------ADAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhcChhhCCHHHHHHHH
Confidence 589999999886 699999987532 222 233445555555432 23567899999999999
Q ss_pred HHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hC-CCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHH
Q 000452 753 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LN-SKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVI 829 (1495)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 829 (1495)
||||++.+|+++||||||++||+.+.+.+++ ++... .+ ++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILA-LLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVF 229 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999888875 44443 33 8999999999999865 9999999999999999988765
Q ss_pred h
Q 000452 830 N 830 (1495)
Q Consensus 830 ~ 830 (1495)
+
T Consensus 230 ~ 230 (233)
T cd03258 230 A 230 (233)
T ss_pred c
Confidence 3
No 401
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=5.5e-36 Score=334.49 Aligned_cols=188 Identities=34% Similarity=0.540 Sum_probs=158.1
Q ss_pred EEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------EEEEccCCc
Q 000452 620 IADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------KAYVAQSPW 691 (1495)
Q Consensus 620 ~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------~ayv~Q~~~ 691 (1495)
++|++++|+ ++++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|++|++.
T Consensus 2 ~~~l~~~~~---~~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~ 78 (213)
T cd03235 2 VEDLTVSYG---GHPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRS 78 (213)
T ss_pred cccceeEEC---CEEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccc
Confidence 578899995 246999999999999999999999999999999999999999999999984 799999987
Q ss_pred c---cCccHHHHHhcCCCC-----------CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 692 I---QSGKIEDNILFGKEM-----------DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 692 l---~~~ti~enI~fg~~~-----------~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
+ ++.|++||+.++... .+++.+++++.+++.+.++ ....+||||||||++||||+
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la~al 147 (213)
T cd03235 79 IDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRVLLARAL 147 (213)
T ss_pred cccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHHHHHHHH
Confidence 6 457999999876421 1234566677777764433 45679999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEec
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAG 823 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g 823 (1495)
..+|+++||||||++||+.+.+.+.+. +... .+++|+|++||+++++.. ||++++|++| +++.|
T Consensus 148 ~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 148 VQDPDLLLLDEPFAGVDPKTQEDIYEL-LRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 999999999999999999998888764 4443 368999999999999865 9999999886 55443
No 402
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-36 Score=337.87 Aligned_cols=196 Identities=26% Similarity=0.384 Sum_probs=163.8
Q ss_pred cEEEEeeEEEecCCC-CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC--------------
Q 000452 617 AIEIADGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------- 681 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g-------------- 681 (1495)
.++++|+++.|+... .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 589999999996322 14799999999999999999999999999999999999999999999987
Q ss_pred ---eEEEEccCCcccC-ccHHHHHhcCC---CCC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHH
Q 000452 682 ---TKAYVAQSPWIQS-GKIEDNILFGK---EMD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQR 750 (1495)
Q Consensus 682 ---~~ayv~Q~~~l~~-~ti~enI~fg~---~~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 750 (1495)
.++|++|++.++. .|++||+.++. ..+ +++..++++.+++.+. ..+...+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHR-----------ANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 2689999998876 49999998742 122 2234455665555332 346678999999999
Q ss_pred HHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCccccCCEEEEEeCCEEEEecC
Q 000452 751 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGK 824 (1495)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~ 824 (1495)
++||||++.+|+++||||||++||+.+.+.+.+ ++... . +|+|+|++||+++++..+|++++|++|++++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQ-LLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999888875 44444 3 4899999999999988888999999999998765
No 403
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-36 Score=347.31 Aligned_cols=203 Identities=25% Similarity=0.440 Sum_probs=169.5
Q ss_pred cEEEEeeEEEecCCC--CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------
Q 000452 617 AIEIADGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------ 682 (1495)
.++++|++++|+... .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999996321 246999999999999999999999999999999999999999999999873
Q ss_pred -----EEEEccCC--cccCccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 683 -----KAYVAQSP--WIQSGKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 683 -----~ayv~Q~~--~l~~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
++|++|+| .++..|++|||.|+.. .+. ++.+++++.++|..+. ...+..+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq~ 151 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDL----------ISKSPFELSGGQM 151 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH----------hhCCcccCCHHHH
Confidence 58999998 4667899999987532 222 2345556666664222 2466789999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 826 (1495)
||++||||++.+|+++||||||++||+...+.+.+ ++..+. +|+|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 152 qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~-~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 152 RRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQ-LFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999888765 455443 58999999999999865 9999999999999999998
Q ss_pred HHHh
Q 000452 827 DVIN 830 (1495)
Q Consensus 827 ~l~~ 830 (1495)
++..
T Consensus 231 ~~~~ 234 (287)
T PRK13641 231 EIFS 234 (287)
T ss_pred HHhc
Confidence 8754
No 404
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-36 Score=340.65 Aligned_cols=203 Identities=26% Similarity=0.387 Sum_probs=172.4
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCC---CCCcEEEEcCe-----------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP---KISGTLKLCGT----------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~---~~~G~v~~~g~----------- 682 (1495)
.++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|.
T Consensus 2 ~~~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYG---KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEEC---CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 478999999995 2579999999999999999999999999999999999974 69999999873
Q ss_pred --EEEEccCCcccCccHHHHHhcCCCC---------CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHH
Q 000452 683 --KAYVAQSPWIQSGKIEDNILFGKEM---------DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRI 751 (1495)
Q Consensus 683 --~ayv~Q~~~l~~~ti~enI~fg~~~---------~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 751 (1495)
++|+||++.+++.|++||+.++... .+++.+++++.+++.+.+.. ...+++.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 6999999999999999999875321 12245566777777544331 23567889999999999
Q ss_pred HHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000452 752 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
+||||++++|+++||||||++||+.+...+.+ ++....+++|+|++||+++.+.. ||++++|++|++++.|+.+++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEE-LLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999887765 55555568999999999998865 99999999999999999988764
No 405
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=6.3e-36 Score=334.02 Aligned_cols=192 Identities=30% Similarity=0.442 Sum_probs=160.6
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EEEE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 686 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~ayv 686 (1495)
++++|++++|+. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~ 77 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMV 77 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEE
Confidence 468999999962 47999999999999999999999999999999999999999999999872 6899
Q ss_pred ccCCcccC-ccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhc
Q 000452 687 AQSPWIQS-GKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALY 758 (1495)
Q Consensus 687 ~Q~~~l~~-~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 758 (1495)
+|++.++. .|++||+.++.. ... ++..+.++..++++. ..+...+||||||||++||||++
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~~laral~ 146 (213)
T cd03301 78 FQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHL-----------LDRKPKQLSGGQRQRVALGRAIV 146 (213)
T ss_pred ecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHH-----------HhCChhhCCHHHHHHHHHHHHHh
Confidence 99998874 699999987532 222 233445555555433 34567899999999999999999
Q ss_pred cCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEec
Q 000452 759 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAG 823 (1495)
Q Consensus 759 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g 823 (1495)
.+|+++||||||++||+++.+.+.+.+..... .++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 147 REPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999998888764333333 38999999999998765 9999999999998765
No 406
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=340.09 Aligned_cols=196 Identities=32% Similarity=0.386 Sum_probs=167.2
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------EEEEc
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------KAYVA 687 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------~ayv~ 687 (1495)
..++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|++
T Consensus 11 ~~l~i~~l~~~~~---~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~ 87 (257)
T PRK11247 11 TPLLLNAVSKRYG---ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMF 87 (257)
T ss_pred CcEEEEEEEEEEC---CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEe
Confidence 3599999999995 357999999999999999999999999999999999999999999999873 69999
Q ss_pred cCCcccC-ccHHHHHhcCCCC-CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeE
Q 000452 688 QSPWIQS-GKIEDNILFGKEM-DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYL 765 (1495)
Q Consensus 688 Q~~~l~~-~ti~enI~fg~~~-~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ill 765 (1495)
|++.++. .|++||+.++... .+++..+.++.+++.+.+ .+++.+||||||||++||||++.+|+++|
T Consensus 88 q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGqkqrl~laraL~~~p~lll 156 (257)
T PRK11247 88 QDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRA-----------NEWPAALSGGQKQRVALARALIHRPGLLL 156 (257)
T ss_pred cCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHh-----------cCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9998776 6999999886421 234556667766665432 46678999999999999999999999999
Q ss_pred ecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChH
Q 000452 766 FDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 766 LDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 826 (1495)
|||||++||+.+...+.+. +... . .++|+|++||+++++.. ||+|++|++|++++.|+.+
T Consensus 157 LDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 157 LDEPLGALDALTRIEMQDL-IESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EeCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999998888754 4443 3 37999999999998764 9999999999999877653
No 407
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=339.89 Aligned_cols=205 Identities=27% Similarity=0.396 Sum_probs=171.1
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCC-----CCcEEEEcCe--------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCGT-------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~-----~~G~v~~~g~-------- 682 (1495)
..++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.
T Consensus 6 ~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYT---DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeC---CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 3699999999995 24699999999999999999999999999999999999987 5899998762
Q ss_pred -------EEEEccCCcccCccHHHHHhcCCCC----CH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHH
Q 000452 683 -------KAYVAQSPWIQSGKIEDNILFGKEM----DR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQ 747 (1495)
Q Consensus 683 -------~ayv~Q~~~l~~~ti~enI~fg~~~----~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 747 (1495)
++|++|++.+++.|++|||.++... +. ++..+.++.+++.+.+. .....++.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK-------DKLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH-------HHHhCCcccCCHHH
Confidence 6899999999889999999886421 21 23344555555532221 12345788999999
Q ss_pred HHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChH
Q 000452 748 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 826 (1495)
|||++||||++.+|+++||||||++||+.+.+.+++ ++....+++|+|++||+++++.. ||++++|++|++++.|+++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 234 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEE-LIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTD 234 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999888875 45555567899999999999765 9999999999999999999
Q ss_pred HHHhc
Q 000452 827 DVINS 831 (1495)
Q Consensus 827 ~l~~~ 831 (1495)
++.+.
T Consensus 235 ~~~~~ 239 (254)
T PRK14273 235 ELFFN 239 (254)
T ss_pred HHHhC
Confidence 88654
No 408
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.8e-35 Score=328.89 Aligned_cols=189 Identities=26% Similarity=0.436 Sum_probs=162.7
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC-------------e
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------T 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g-------------~ 682 (1495)
..++++|++++|+.. .+++++|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999632 24799999999999999999999999999999999999999999999987 3
Q ss_pred EEEEccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCC
Q 000452 683 KAYVAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDAD 762 (1495)
Q Consensus 683 ~ayv~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ 762 (1495)
++|++|+|.++++|++||+.+...++.++..+.++ +++++.+||||||||++||||++.+|+
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p~ 145 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRPR 145 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 69999999999999999997755444333222221 346788999999999999999999999
Q ss_pred EeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEecC
Q 000452 763 IYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGK 824 (1495)
Q Consensus 763 illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~ 824 (1495)
++||||||++||+.+.+.+.+ .+....+++|+|++||+++.+..||++++|++|++.+.|+
T Consensus 146 llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 146 VLVLDEATASIDYATDALIQK-TIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 999999999999999887765 4554556899999999999987799999999999988775
No 409
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=8.1e-36 Score=358.07 Aligned_cols=200 Identities=25% Similarity=0.444 Sum_probs=172.1
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ 683 (1495)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 588999999995 357999999999999999999999999999999999999999999999882 6
Q ss_pred EEEccCCcc-cCccHHHHHhcCCC-----C------CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHH
Q 000452 684 AYVAQSPWI-QSGKIEDNILFGKE-----M------DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRI 751 (1495)
Q Consensus 684 ayv~Q~~~l-~~~ti~enI~fg~~-----~------~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 751 (1495)
+||+|++.+ ++.|++||+.++.. + ++++.+++++..++.+.. .....+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~-----------~~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFA-----------DRPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHH
Confidence 999999877 57899999988742 1 133455666666664332 356789999999999
Q ss_pred HHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHH
Q 000452 752 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVI 829 (1495)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 829 (1495)
+|||||+++|+++||||||++||+.....+.+ +++.+ .+++|+|++||+++.+.. ||++++|++|++++.|++++++
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~-lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLE-LVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999999999999999888875 44444 358899999999999865 9999999999999999999987
Q ss_pred hc
Q 000452 830 NS 831 (1495)
Q Consensus 830 ~~ 831 (1495)
..
T Consensus 228 ~~ 229 (402)
T PRK09536 228 TA 229 (402)
T ss_pred Cc
Confidence 54
No 410
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=344.83 Aligned_cols=200 Identities=27% Similarity=0.445 Sum_probs=171.4
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------- 682 (1495)
.++++|++++|+. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 6899999999952 357999999999999999999999999999999999999999999999873
Q ss_pred -EEEEccCC--cccCccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHH
Q 000452 683 -KAYVAQSP--WIQSGKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQ 752 (1495)
Q Consensus 683 -~ayv~Q~~--~l~~~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 752 (1495)
++|++|+| .+++.|++||+.++.. +. .++.+++++.++|.... ...+.+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-----------DKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-----------hCCcccCCHHHHHHHH
Confidence 58999998 5678899999987532 22 23455666777765432 4678899999999999
Q ss_pred HHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-C-CCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHHHH
Q 000452 753 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-N-SKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTDVI 829 (1495)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~ 829 (1495)
|||||+.+|+++||||||++||+.+.+.+.+. +.... + |+|+|++||+++.+. .||++++|++|++++.|+++++.
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKL-LVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999998888754 44443 3 899999999999987 59999999999999999999886
Q ss_pred h
Q 000452 830 N 830 (1495)
Q Consensus 830 ~ 830 (1495)
.
T Consensus 231 ~ 231 (283)
T PRK13636 231 A 231 (283)
T ss_pred c
Confidence 5
No 411
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=9.8e-36 Score=352.38 Aligned_cols=203 Identities=26% Similarity=0.424 Sum_probs=170.0
Q ss_pred cccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------
Q 000452 615 ETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1495)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------ 682 (1495)
...|+++|++++|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 39 ~~~i~i~nl~k~y~---~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ 115 (340)
T PRK13536 39 TVAIDLAGVSKSYG---DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARAR 115 (340)
T ss_pred ceeEEEEEEEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhcc
Confidence 34699999999995 357999999999999999999999999999999999999999999999883
Q ss_pred EEEEccCCccc-CccHHHHHhc-CCC--CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHH
Q 000452 683 KAYVAQSPWIQ-SGKIEDNILF-GKE--MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIA 754 (1495)
Q Consensus 683 ~ayv~Q~~~l~-~~ti~enI~f-g~~--~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 754 (1495)
++|+||++.++ ..|++||+.+ +.. .+. ++.+++++.++|.+. ..++..+||||||||++||
T Consensus 116 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~-----------~~~~~~~LS~G~kqrv~lA 184 (340)
T PRK13536 116 IGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADARVSDLSGGMKRRLTLA 184 (340)
T ss_pred EEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hCCChhhCCHHHHHHHHHH
Confidence 69999999885 5699999975 221 121 233344554444322 2456779999999999999
Q ss_pred HHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 755 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
|||+++|+++||||||++||+.+...+++.+.....+|+|||++||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 185 ~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 185 RALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 99999999999999999999999988876443333358999999999999875 999999999999999999998653
No 412
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.3e-35 Score=356.27 Aligned_cols=227 Identities=26% Similarity=0.407 Sum_probs=193.0
Q ss_pred eEEEeeeeEEeCCCCC--cceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCC----ccEEEEcCEeCCCCCHHH
Q 000452 1247 KIDLRDLQVRYAPHMP--FVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPA----AGQILIDGIDISLIGLHD 1320 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~--~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~----~G~I~IDG~dI~~i~l~~ 1320 (1495)
-++++|++..|..... .+++||||+|.+||.+||||+|||||||++++|.|+.++. +|+|..||.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975533 5999999999999999999999999999999999999987 899999999999999866
Q ss_pred Hh----cccEEEcccCc-CCCC--cHHHhcCC----C----CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCC
Q 000452 1321 LR----TRLSIIPQDPV-MFEG--TVRSNVDP----L----EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENW 1385 (1495)
Q Consensus 1321 LR----~~isiIpQdp~-LF~G--TIR~NLdp----~----~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nL 1385 (1495)
.| ++|++|||||. .++- ||.+-|.- . .+...++..+.|+++++.+-... ..-...|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 53 57999999995 5554 66655531 1 11124567888999998765544 1224578
Q ss_pred CchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeCcEEEE
Q 000452 1386 SMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGLIEE 1462 (1495)
Q Consensus 1386 S~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE 1462 (1495)
|||||||+.||+||..+|++||+||||.+||..|.+.|.+.|++.. .+.++|+|||++..+.. ||||+||++|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999876 58899999999999987 99999999999999
Q ss_pred ecChhHHhhcCCChHHHHHH
Q 000452 1463 YDSPRKLLENKSSSFSQLVA 1482 (1495)
Q Consensus 1463 ~gsp~~Ll~~~~s~f~~lv~ 1482 (1495)
.|+++++++++...|.+..-
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll 255 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLL 255 (539)
T ss_pred ecCHHHHHhccCCcccHHHH
Confidence 99999999987766655443
No 413
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-36 Score=310.43 Aligned_cols=213 Identities=25% Similarity=0.376 Sum_probs=185.5
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|+|.|||+|+.+-+ ...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p-~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDP-SFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccCh-HHHhhhcce
Confidence 678999999987 334899999999999999999999999999999999999999999999999998765 568999999
Q ss_pred EcccCcCCCC-cHHHhcCCCC---CCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHH
Q 000452 1328 IPQDPVMFEG-TVRSNVDPLE---EYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVL 1399 (1495)
Q Consensus 1328 IpQdp~LF~G-TIR~NLdp~~---~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARAL 1399 (1495)
++-+.-|+.. |.||||..|+ +.++ .++.+.-+..+|.+...+ .+ .+||-|+||+++|||||
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~r-------Rv----~~~S~G~kqkV~iARAl 148 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLDR-------RV----GEFSTGMKQKVAIARAL 148 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHHH-------HH----hhhchhhHHHHHHHHHH
Confidence 9977667655 9999998654 3333 345555666666665443 33 35899999999999999
Q ss_pred ccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC-CcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhhcC
Q 000452 1400 LKRRKILMLDEATASVDTATDNLIQQSLRQHFS-DCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLENK 1473 (1495)
Q Consensus 1400 Lr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~-~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~~~ 1473 (1495)
.++|+|+|||||||+||.-|...+++.|++... +++||.-+|-++.+. -||+|+++.+|+++..|+++++.++.
T Consensus 149 vh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r~ 224 (245)
T COG4555 149 VHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDART 224 (245)
T ss_pred hcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHHH
Confidence 999999999999999999999999999998765 899999999999998 69999999999999999999998653
No 414
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.5e-35 Score=337.05 Aligned_cols=199 Identities=31% Similarity=0.463 Sum_probs=167.7
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC---------------e
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------------T 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g---------------~ 682 (1495)
++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~---~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFG---PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEEC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 68899999995 25799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEccCCcccC-ccHHHHHhcCCC----CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 KAYVAQSPWIQS-GKIEDNILFGKE----MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 ~ayv~Q~~~l~~-~ti~enI~fg~~----~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
++|++|++.++. .|++||+.++.. .+. ++..++++..++++. ...+..+||||||||++|
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrv~l 147 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAER-----------AHHYPSELSGGQQQRVAI 147 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHH-----------HhcChhhcCHHHHHHHHH
Confidence 589999998775 699999987531 222 233445555554332 345678999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
|||++.+|++++|||||++||+++.+.+.+ ++.... +++|+|++||+++++.. ||++++|++|++++.|+++++.+.
T Consensus 148 a~al~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 148 ARALAVKPKLMLFDEPTSALDPELRHEVLK-VMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999999999999999888876 454443 58999999999999875 999999999999999999887643
No 415
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-36 Score=344.63 Aligned_cols=198 Identities=31% Similarity=0.437 Sum_probs=165.8
Q ss_pred EEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC-----------------
Q 000452 619 EIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG----------------- 681 (1495)
Q Consensus 619 ~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g----------------- 681 (1495)
.++|+++.|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 3456777774 35689999999999999999999999999999999999999999999876
Q ss_pred eEEEEccCCccc-CccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 682 TKAYVAQSPWIQ-SGKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 682 ~~ayv~Q~~~l~-~~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
.++|++|++.++ +.|++||+.++.. .+ +++..++++.++|.+.+ .....+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWE-----------HKYPDELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHh-----------hCCcccCCHHHHHHHHH
Confidence 268999999887 4699999987531 22 23455666666665444 35567999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
|||++.+|+++||||||++||+.+.+.+.+. +... . .|+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDE-LLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999998888754 4443 2 37999999999998765 99999999999999999988865
Q ss_pred c
Q 000452 831 S 831 (1495)
Q Consensus 831 ~ 831 (1495)
.
T Consensus 251 ~ 251 (269)
T cd03294 251 N 251 (269)
T ss_pred C
Confidence 3
No 416
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.4e-35 Score=338.44 Aligned_cols=206 Identities=22% Similarity=0.318 Sum_probs=176.3
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
++++||+++ .+|+|+||+|++||++||+|++|||||||+++|.|+++ .+|+|.+||.++...+...+|+.++|
T Consensus 1 ~~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~i~~ 73 (248)
T PRK03695 1 MQLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-GSGSIQFAGQPLEAWSAAELARHRAY 73 (248)
T ss_pred Ccccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-CCeEEEECCEecCcCCHHHHhhheEE
Confidence 356788875 28999999999999999999999999999999999986 49999999999998888888889999
Q ss_pred EcccCc-CCCCcHHHhcCCCCC--CC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHc
Q 000452 1328 IPQDPV-MFEGTVRSNVDPLEE--YT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLL 1400 (1495)
Q Consensus 1328 IpQdp~-LF~GTIR~NLdp~~~--~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALL 1400 (1495)
+||+|. .+..|+++|+..... .+ ++++.++++..++.+...+ ....||+|||||++|||||+
T Consensus 74 v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~ 142 (248)
T PRK03695 74 LSQQQTPPFAMPVFQYLTLHQPDKTRTEAVASALNEVAEALGLDDKLGR-----------SVNQLSGGEWQRVRLAAVVL 142 (248)
T ss_pred ecccCccCCCccHHHHHHhcCccCCCcHHHHHHHHHHHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHHHHh
Confidence 999985 456799999974321 11 3356777888777544322 34579999999999999999
Q ss_pred c-------CCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhh-ccCEEEEEeCcEEEEecChhHHhh
Q 000452 1401 K-------RRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVI-DSDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1401 r-------~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~-~~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
+ +|++|||||||++||+.+...+.+.|++.. +++|||+|+|+++.+. .||+|++|++|++++.|+++++.+
T Consensus 143 ~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 222 (248)
T PRK03695 143 QVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLT 222 (248)
T ss_pred ccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhC
Confidence 7 679999999999999999999999998875 4789999999999765 599999999999999999999874
No 417
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.1e-35 Score=333.22 Aligned_cols=194 Identities=22% Similarity=0.317 Sum_probs=161.7
Q ss_pred EEEEeeEEEecCCC-CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------EE
Q 000452 618 IEIADGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KA 684 (1495)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------~a 684 (1495)
++++|++++|+... ..++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|. ++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 67899999996321 126999999999999999999999999999999999999999999999872 68
Q ss_pred EEccCCcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHH
Q 000452 685 YVAQSPWIQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARA 756 (1495)
Q Consensus 685 yv~Q~~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 756 (1495)
|++|++.++. .|++||+.+... .+ .++..+.++..++.+. ..+++.+||||||||++||||
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~lara 150 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEEL-----------LDRRVGGFSTGMRQKVAIARA 150 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhhhhhhcCHHHHHHHHHHHH
Confidence 9999998877 499999976421 11 2344555666665433 346778999999999999999
Q ss_pred hccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEec
Q 000452 757 LYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAG 823 (1495)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g 823 (1495)
++.+|+++||||||++||+.+.+.+.+. +... .+++|+|++||+++++.. ||++++|++|++.+.|
T Consensus 151 l~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 151 LVHDPPVLLLDEPTTGLDVMATRALREF-IRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HhcCCCEEEEcCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999998888764 4443 358999999999998765 9999999999998654
No 418
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.4e-35 Score=344.29 Aligned_cols=201 Identities=27% Similarity=0.417 Sum_probs=173.3
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC------------eEE
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------TKA 684 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g------------~~a 684 (1495)
.++++|++..|.. ++.+|+||||++++|+++|++||||||||||+++|+|+++|++|+|.++| ++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKEPAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccCHHHHHhheE
Confidence 4788999999952 36799999999999999999999999999999999999999999999998 379
Q ss_pred EEccCCccc-CccHHHHHhcCC-----C--CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHH
Q 000452 685 YVAQSPWIQ-SGKIEDNILFGK-----E--MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARA 756 (1495)
Q Consensus 685 yv~Q~~~l~-~~ti~enI~fg~-----~--~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 756 (1495)
|+||+|.++ ..|++||+.|.. + .++++.+++++..+|.++. +.+..+||||||||++||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-----------NKKVRTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-----------CcchhhcCHHHHHHHHHHHH
Confidence 999999865 569999998732 1 2356777888877776521 36678999999999999999
Q ss_pred hccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCC-CEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000452 757 LYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNS-KTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~-~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
|.++|+++||||||+||||..+..+++.+.....++ +||+++||.++.+.. ||+|++|++|+++..|+.+++..
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~ 226 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKE 226 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHH
Confidence 999999999999999999999888875433334445 799999999999876 99999999999999999988754
No 419
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=331.26 Aligned_cols=192 Identities=26% Similarity=0.402 Sum_probs=160.5
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC---------eEEEEcc
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------TKAYVAQ 688 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g---------~~ayv~Q 688 (1495)
++++|+++.|+ ++++++|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~---~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q 77 (210)
T cd03269 1 LEVENVTKRFG---RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPE 77 (210)
T ss_pred CEEEEEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEecc
Confidence 46899999995 35799999999999999999999999999999999999999999999987 3799999
Q ss_pred CCcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccC
Q 000452 689 SPWIQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQD 760 (1495)
Q Consensus 689 ~~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1495)
++.++. .|++||+.++.. .. +++..+.++..++.... .+...+||||||||++||||++.+
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 78 ERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYA-----------NKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred CCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHH-----------hCcHhhCCHHHHHHHHHHHHHhcC
Confidence 998876 599999976431 11 23344555555554333 356789999999999999999999
Q ss_pred CCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEec
Q 000452 761 ADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAG 823 (1495)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g 823 (1495)
|+++||||||++||+.+.+.+.+.+.....+++|+|++||+++.+.. ||++++|++|++.+.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999888876443323357899999999998865 9999999999998654
No 420
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=4e-32 Score=330.11 Aligned_cols=445 Identities=18% Similarity=0.193 Sum_probs=312.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhcCCC-----HHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHH
Q 000452 360 RFFVFRLEQLGIRLRAALIAMIYNKGLKLSSQAKQGNT-----SGEIINFMTVDAERVAELSWYI-HDPWLFLFEVALSF 433 (1495)
Q Consensus 360 ~~~~~~~~~~g~rir~~L~~~iy~K~L~ls~~~~~~~~-----~G~i~nl~s~D~~~i~~~~~~~-~~~w~~pl~i~~~~ 433 (1495)
....|..+++..+.|.-|...+.+|=|.-....+-... .-..=+++..|+..+.+....+ ..+....++++.-.
T Consensus 104 v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~ 183 (604)
T COG4178 104 VAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFT 183 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 34566778899999999999999998887654432211 1224468888888877654433 33444555666666
Q ss_pred HHHHHHHHHHH---------HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHhhHHHHHHhc
Q 000452 434 LILYKSLGIAS---------VAA--FFGTVIFMLVNVPLSTVQEKFQNELMK-----SKDERMKATSEILRNMRILKLQG 497 (1495)
Q Consensus 434 ~lL~~~lG~~~---------l~g--l~~~i~~~~~~~~~~~~~~~~~~~~m~-----~~D~R~~~~~E~L~~ir~IK~~~ 497 (1495)
.+||...|..+ +.| +.++++..++...++-+..+.-.++.- .-|-|- ....+.++...|-+|+
T Consensus 184 ~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~-~Lvrv~enaE~IAly~ 262 (604)
T COG4178 184 GILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRY-SLVRVRENAEAIALYR 262 (604)
T ss_pred HHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHH-HHHHHHhhHHHHHHhc
Confidence 67886555221 111 122233333333333232222222222 223333 3447788889999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH
Q 000452 498 WELKFLSKTIDLRKSESGWLKRCL----YTSSITSFVFWCAPTFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIY 573 (1495)
Q Consensus 498 wE~~f~~~i~~~R~~E~~~l~~~~----~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~L~~~~vft~lalf~~l~~pl~ 573 (1495)
-|+.-.+++.+.-..=++..++.. .+..+.....++++++-.++ .+-.+..+.++-|.+..+-..|+.+...+.
T Consensus 263 GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li--~ap~~f~g~i~~G~lmqa~~aF~~v~ssls 340 (604)
T COG4178 263 GEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILI--AAPRYFSGQITFGGLMQAVGAFGQVHSSLS 340 (604)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHh--ccHhhhcCcChHHHHHHHHHHHHHHHHHHH
Confidence 998766666543322222111111 11111112222222111111 112245778999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC--CCcccccCCCC------CCCcccEEEEeeEEEecCCCCCCccccceEEeeC
Q 000452 574 KLPAIISMTIQTKVSLQRIASFFCLDE--LQPDLVEKQPR------GSSETAIEIADGNFSWDISSHNPTLKDINLKVFH 645 (1495)
Q Consensus 574 ~lp~~i~~~~~a~vs~~RI~~fL~~~e--~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~ 645 (1495)
.+-+.+..+.+-++++.|+.+|-..-| ..++.....+. +..+..|.++|++..-+. .++.+++.||++++
T Consensus 341 wfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~--~~~ll~~l~~~v~~ 418 (604)
T COG4178 341 WFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPD--GQTLLSELNFEVRP 418 (604)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCC--CCeeeccceeeeCC
Confidence 999999999999999999999985322 00110000000 111467999999998763 35899999999999
Q ss_pred CcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC--eEEEEccCCcccCccHHHHHhcCCC---CCHHHHHHHHHHhC
Q 000452 646 GMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--TKAYVAQSPWIQSGKIEDNILFGKE---MDRERYNAVLDACS 720 (1495)
Q Consensus 646 G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--~~ayv~Q~~~l~~~ti~enI~fg~~---~~~~~~~~vl~~~~ 720 (1495)
|+.+.|.||||||||||+++|.|+.|--+|+|.... ..-|+||.|.+..||.||-|++... ++++.+.+++..|+
T Consensus 419 G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vg 498 (604)
T COG4178 419 GERLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVG 498 (604)
T ss_pred CCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcC
Confidence 999999999999999999999999999999998873 3689999999999999999999753 77899999999999
Q ss_pred cHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEec
Q 000452 721 LEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTH 800 (1495)
Q Consensus 721 l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH 800 (1495)
|.+-.+.+..-+. =...||||||||+++||.++++|++++|||.|||||+.++..+++ .++..+.+.|+|-|.|
T Consensus 499 L~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q-~l~~~lp~~tvISV~H 572 (604)
T COG4178 499 LGDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQ-LLKEELPDATVISVGH 572 (604)
T ss_pred cHHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHH-HHHhhCCCCEEEEecc
Confidence 9998888765544 346899999999999999999999999999999999999988885 4666778999999999
Q ss_pred CCCccccCCEEEEEe
Q 000452 801 QVEFLPAADLVLVIK 815 (1495)
Q Consensus 801 ~~~~l~~~d~i~~l~ 815 (1495)
+.......++.+.+.
T Consensus 573 r~tl~~~h~~~l~l~ 587 (604)
T COG4178 573 RPTLWNFHSRQLELL 587 (604)
T ss_pred chhhHHHHhhheeec
Confidence 988776666655554
No 421
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-35 Score=331.77 Aligned_cols=190 Identities=24% Similarity=0.391 Sum_probs=161.1
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC------------eEEE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------TKAY 685 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g------------~~ay 685 (1495)
++++|+++.|+ ++++++|+||++++| +++|+||||||||||+++|+|+++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~---~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYG---KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEEC---CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEE
Confidence 46899999995 247999999999999 9999999999999999999999999999999987 2689
Q ss_pred EccCCcccCc-cHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 686 VAQSPWIQSG-KIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 686 v~Q~~~l~~~-ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
++|++.++.. |++||+.+... .+ +++.+++++.+++.+..+ ....+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-----------KKIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-----------CchhhCCHHHHHHHHHHHHH
Confidence 9999988765 99999986421 11 234556677776654332 45678999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEec
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAG 823 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g 823 (1495)
+++|+++||||||++||+.+.+.+.+ .+....+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRN-LLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999888875 45555557999999999999865 9999999999998754
No 422
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=337.55 Aligned_cols=202 Identities=28% Similarity=0.423 Sum_probs=166.1
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 684 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~a 684 (1495)
++++|++++|+.. +++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|. ++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4689999999631 56999999999999999999999999999999999999999999999873 58
Q ss_pred EEccCCcccC-ccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHH
Q 000452 685 YVAQSPWIQS-GKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARA 756 (1495)
Q Consensus 685 yv~Q~~~l~~-~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 756 (1495)
|++|+|.++. .|++||+.++.. .+. ++..++++..++.+ .....+.+.+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~lara 149 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVARA 149 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHHHH
Confidence 9999998885 699999987532 221 23344444444432 012346778999999999999999
Q ss_pred hccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000452 757 LYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
++.+|+++||||||++||+.+.+.+.+.+..... .++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 150 l~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 150 LAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999999998877754433333 38999999999998765 99999999999999999888754
No 423
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.6e-35 Score=342.07 Aligned_cols=201 Identities=25% Similarity=0.362 Sum_probs=168.3
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------- 682 (1495)
..++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (269)
T PRK11831 6 NLVDMRGVSFTRG---NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTV 82 (269)
T ss_pred ceEEEeCeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHH
Confidence 3689999999995 357999999999999999999999999999999999999999999998862
Q ss_pred ---EEEEccCCcccCc-cHHHHHhcCC----CCCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHH
Q 000452 683 ---KAYVAQSPWIQSG-KIEDNILFGK----EMDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQR 750 (1495)
Q Consensus 683 ---~ayv~Q~~~l~~~-ti~enI~fg~----~~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 750 (1495)
++|++|++.++.. |++||+.++. ..+. ++..+.++.+++.+. ...+..+||||||||
T Consensus 83 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq~qr 151 (269)
T PRK11831 83 RKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGA-----------AKLMPSELSGGMARR 151 (269)
T ss_pred hhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHH
Confidence 6899999988865 9999998642 1222 223344555554322 235678999999999
Q ss_pred HHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hC-CCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000452 751 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LN-SKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 827 (1495)
++||||++.+|+++||||||++||+.+.+.+.+ ++... .+ ++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 152 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 230 (269)
T PRK11831 152 AALARAIALEPDLIMFDEPFVGQDPITMGVLVK-LISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQA 230 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999888875 44443 33 7899999999998865 99999999999999999999
Q ss_pred HHhc
Q 000452 828 VINS 831 (1495)
Q Consensus 828 l~~~ 831 (1495)
+.+.
T Consensus 231 ~~~~ 234 (269)
T PRK11831 231 LQAN 234 (269)
T ss_pred HhcC
Confidence 8754
No 424
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-35 Score=339.33 Aligned_cols=205 Identities=29% Similarity=0.421 Sum_probs=171.9
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCC-----CCCcEEEEcC---------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG--------- 681 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~-----~~~G~v~~~g--------- 681 (1495)
..++++|++++|+ ++++|+|+||+|++||+++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 12 ~~l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 12 SKIQVRNLNFYYG---KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred ceEEEEEEEEEeC---CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 4689999999995 2479999999999999999999999999999999999986 5899999876
Q ss_pred ------eEEEEccCCcccCccHHHHHhcCCC----CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHH
Q 000452 682 ------TKAYVAQSPWIQSGKIEDNILFGKE----MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQ 747 (1495)
Q Consensus 682 ------~~ayv~Q~~~l~~~ti~enI~fg~~----~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 747 (1495)
.++|++|++.++..|++||+.++.. .+. ++.+++++..++.+++. ...++...+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHHH
Confidence 2689999999888999999987632 222 33455566665533322 23457788999999
Q ss_pred HHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChH
Q 000452 748 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 826 (1495)
|||++||||++.+|+++||||||++||+.+.+.+.+ .+....+++|+|++||+++.+.. ||++++|++|++++.|+.+
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEE-LITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999888765 45555567899999999998865 9999999999999999998
Q ss_pred HHHhc
Q 000452 827 DVINS 831 (1495)
Q Consensus 827 ~l~~~ 831 (1495)
++.+.
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 88653
No 425
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=340.88 Aligned_cols=203 Identities=31% Similarity=0.457 Sum_probs=170.5
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------- 682 (1495)
..++++|++++|+. +++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~l~~~nl~~~~~~-~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 84 (271)
T PRK13632 6 VMIKVENVSFSYPN-SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKK 84 (271)
T ss_pred eEEEEEeEEEEcCC-CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcc
Confidence 36899999999952 2357999999999999999999999999999999999999999999999872
Q ss_pred EEEEccCCc--ccCccHHHHHhcCCC---CCHH----HHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 KAYVAQSPW--IQSGKIEDNILFGKE---MDRE----RYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 ~ayv~Q~~~--l~~~ti~enI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
++|++|+|. +++.|++||+.++.. ++.+ +.+++++..++.+.+ .+...+||||||||++|
T Consensus 85 i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~l 153 (271)
T PRK13632 85 IGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYL-----------DKEPQNLSGGQKQRVAI 153 (271)
T ss_pred eEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCCcccCCHHHHHHHHH
Confidence 589999984 557899999987532 3332 345556666665443 35678999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHh
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLN-SKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
|||++.+|+++||||||++||+.+.+.+++.+.....+ ++|+|++||+++.+..||++++|++|++.+.|+.+++..
T Consensus 154 aral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 154 ASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999988887644333334 589999999999887899999999999999999888754
No 426
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-35 Score=326.20 Aligned_cols=206 Identities=29% Similarity=0.401 Sum_probs=174.5
Q ss_pred cEEEEeeEEEecCCC---------------------CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCc
Q 000452 617 AIEIADGNFSWDISS---------------------HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISG 675 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~---------------------~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G 675 (1495)
.|+++|+.+-+.... ...-++|+||+++.||+.+|.|-+|||||||++++.++++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 577888877775321 01247899999999999999999999999999999999999999
Q ss_pred EEEEcCe-----------------EEEEccCCccc-CccHHHHHhcCCCCC-------HHHHHHHHHHhCcHHHHhhcCC
Q 000452 676 TLKLCGT-----------------KAYVAQSPWIQ-SGKIEDNILFGKEMD-------RERYNAVLDACSLEKDLEILSF 730 (1495)
Q Consensus 676 ~v~~~g~-----------------~ayv~Q~~~l~-~~ti~enI~fg~~~~-------~~~~~~vl~~~~l~~dl~~l~~ 730 (1495)
+|.++|. ++.|+|+.-++ ..||.||+.||.+.. +++..+.++..+|+..-+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~---- 159 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYAD---- 159 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhh----
Confidence 9999984 48999997764 679999999997642 345556677777765443
Q ss_pred CCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCcc-ccC
Q 000452 731 GDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLN-SKTVLYVTHQVEFL-PAA 808 (1495)
Q Consensus 731 gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~-~~tvIlvTH~~~~l-~~~ 808 (1495)
..+.+||||+||||.|||||..||||+|+|||||||||--..++-++++....+ +||+|+||||+++. ...
T Consensus 160 -------~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 160 -------KYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred -------cCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 556899999999999999999999999999999999999998888877654333 79999999999985 569
Q ss_pred CEEEEEeCCEEEEecChHHHHhcCC
Q 000452 809 DLVLVIKDGKITQAGKYTDVINSGT 833 (1495)
Q Consensus 809 d~i~~l~~G~i~~~g~~~~l~~~~~ 833 (1495)
|||.+|+||+|++.|+++|++.+..
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PA 257 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPA 257 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCcc
Confidence 9999999999999999999987643
No 427
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=3.9e-35 Score=335.49 Aligned_cols=211 Identities=19% Similarity=0.255 Sum_probs=169.5
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccc--cCCccEEEEcCEeCCCCCHHHHh-cc
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIV--EPAAGQILIDGIDISLIGLHDLR-TR 1324 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~--ep~~G~I~IDG~dI~~i~l~~LR-~~ 1324 (1495)
|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|++ +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999964 35999999999999999999999999999999999995 69999999999999888766654 57
Q ss_pred cEEEcccCcCCCC-cHHHhcC-------CCCC---CC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchH
Q 000452 1325 LSIIPQDPVMFEG-TVRSNVD-------PLEE---YT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1325 isiIpQdp~LF~G-TIR~NLd-------p~~~---~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQ 1389 (1495)
++|+||+|.++.. |..+|+. .... .. ++.+.+.++..++ |+++.+... ..+||+||
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~--~~~LS~G~ 150 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKM-------PEDLLTRSV--NVGFSGGE 150 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCC-------ChhhcccCC--CCCCCHHH
Confidence 9999999987765 4444432 1110 01 1122333444333 222222111 13699999
Q ss_pred HHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC-CcEEEEEecCchhhhc--cCEEEEEeCcEEEEecCh
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS-DCTVITIAHRITSVID--SDMVLLLSHGLIEEYDSP 1466 (1495)
Q Consensus 1390 rQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~-~~TVI~IAHRl~ti~~--~DrIlVL~~G~ivE~gsp 1466 (1495)
|||++||||++++|+||+|||||++||.++...+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|++
T Consensus 151 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~ 230 (248)
T PRK09580 151 KKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDF 230 (248)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCH
Confidence 9999999999999999999999999999999999999987653 6899999999999987 899999999999999998
Q ss_pred hHH
Q 000452 1467 RKL 1469 (1495)
Q Consensus 1467 ~~L 1469 (1495)
+..
T Consensus 231 ~~~ 233 (248)
T PRK09580 231 TLV 233 (248)
T ss_pred HHH
Confidence 854
No 428
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=344.11 Aligned_cols=203 Identities=25% Similarity=0.431 Sum_probs=167.7
Q ss_pred cEEEEeeEEEecCCC--CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------
Q 000452 617 AIEIADGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------ 682 (1495)
.++++|++++|+... .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 378999999996321 146999999999999999999999999999999999999999999999872
Q ss_pred -----EEEEccCC--cccCccHHHHHhcCCC---CCHH----HHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 683 -----KAYVAQSP--WIQSGKIEDNILFGKE---MDRE----RYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 683 -----~ayv~Q~~--~l~~~ti~enI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
++|++|++ .+++.|++||+.++.. .+.+ +.+++++..++.++ ....+..+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~~ 151 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQM 151 (280)
T ss_pred HHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHHH
Confidence 58999998 5778899999987532 2222 23344444444321 12467789999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 826 (1495)
||++||||++.+|+++||||||++||+.+.+.+.+. +... .+++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 152 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (280)
T PRK13649 152 RRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTL-FKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPK 230 (280)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999998888764 4443 348999999999998865 9999999999999999998
Q ss_pred HHHh
Q 000452 827 DVIN 830 (1495)
Q Consensus 827 ~l~~ 830 (1495)
++..
T Consensus 231 ~~~~ 234 (280)
T PRK13649 231 DIFQ 234 (280)
T ss_pred HHhc
Confidence 8754
No 429
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.3e-35 Score=336.38 Aligned_cols=191 Identities=23% Similarity=0.333 Sum_probs=160.5
Q ss_pred CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEc-ccCcCC-CCcH
Q 000452 1262 PFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIP-QDPVMF-EGTV 1339 (1495)
Q Consensus 1262 ~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIp-Qdp~LF-~GTI 1339 (1495)
.++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.... ..+|++++|+| |++.+| .-|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~-~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKRR-KKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccccc-hhhcccEEEEcCCccccCCCCcH
Confidence 45999999999999999999999999999999999999999999999999876533 46788999998 667776 4599
Q ss_pred HHhcCCC---CCCCHH----HHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCC
Q 000452 1340 RSNVDPL---EEYTDE----QIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEAT 1412 (1495)
Q Consensus 1340 R~NLdp~---~~~sd~----ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaT 1412 (1495)
++|+... ...+++ ++.++++..++.+.. |+. ...||+|||||++|||||+.+|+||||||||
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~~~----~~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEELL-------DTP----VRQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-------cCC----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 9998532 122332 345566666664332 333 3469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEeCcEEEEec
Q 000452 1413 ASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1413 sslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~g 1464 (1495)
++||+++...+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999998643 6899999999998865 9999999999998765
No 430
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.5e-35 Score=352.91 Aligned_cols=188 Identities=30% Similarity=0.447 Sum_probs=161.5
Q ss_pred CCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC---------------------eEEEEccCCc
Q 000452 633 NPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------------------TKAYVAQSPW 691 (1495)
Q Consensus 633 ~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g---------------------~~ayv~Q~~~ 691 (1495)
..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++| .++||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 4689999999999999999999999999999999999999999999987 2699999999
Q ss_pred ccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCE
Q 000452 692 IQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADI 763 (1495)
Q Consensus 692 l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~i 763 (1495)
+++ .|++||+.++.. .+ +++..+.++..+|.+.. .....+|||||||||+|||||+++|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~-----------~~~~~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWA-----------DKKPGELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 986 799999998742 22 23445566666664332 356678999999999999999999999
Q ss_pred eEecCcCCccCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHHHHhc
Q 000452 764 YLFDDPFSAVDAHTGSHLFKEVLLGLLN-SKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 764 llLDep~saLD~~~~~~i~~~~~~~~~~-~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
+|||||||+||+.+.+.+++.+.....+ ++|+|+||||++++. .||+|++|++|++++.|+++++...
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 9999999999999999988765543333 899999999999875 5999999999999999999998754
No 431
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.1e-35 Score=331.82 Aligned_cols=191 Identities=29% Similarity=0.424 Sum_probs=158.9
Q ss_pred EEEEeeEEEecCCC-CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC---------------
Q 000452 618 IEIADGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 681 (1495)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--------------- 681 (1495)
++++|++++|+... .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 68899999996321 24699999999999999999999999999999999999999999999876
Q ss_pred --eEEEEccCCcccC-ccHHHHHhcCC---CCCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHH
Q 000452 682 --TKAYVAQSPWIQS-GKIEDNILFGK---EMDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRI 751 (1495)
Q Consensus 682 --~~ayv~Q~~~l~~-~ti~enI~fg~---~~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 751 (1495)
.++|++|++.++. .|++||+.++. .++. ++..+.++.+++++. ....+.+||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHR-----------INHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHHHH
Confidence 2789999998874 69999998742 1222 234455555555432 2456689999999999
Q ss_pred HHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCccccCCEEEEEeCCEEE
Q 000452 752 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPAADLVLVIKDGKIT 820 (1495)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~ 820 (1495)
+||||++.+|+++||||||++||+++.+.+.+ ++... . .++|+|++||+++++..+|++++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFD-LMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999888875 44444 3 378999999999988779999999999975
No 432
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=2.4e-35 Score=326.11 Aligned_cols=194 Identities=25% Similarity=0.341 Sum_probs=168.8
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
++++|++++|+. ..+|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.... ..+|++++|
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 478999999964 35999999999999999999999999999999999999999999999999987654 567899999
Q ss_pred EcccCcCC-CCcHHHhcCCC-CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCe
Q 000452 1328 IPQDPVMF-EGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKI 1405 (1495)
Q Consensus 1328 IpQdp~LF-~GTIR~NLdp~-~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~I 1405 (1495)
+||+|.++ ..|+++|+... ...+++++.++++..++.+...+ . ..+||+|||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~----~~~LS~G~~qrl~laral~~~p~l 146 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFEDR-------P----VAQLSAGQQRRVALARLLLSGRPL 146 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhhhcC-------c----hhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999876 57999999643 33467788999999998754322 2 357999999999999999999999
Q ss_pred EEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchh-hhccCEEEEE
Q 000452 1406 LMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITS-VIDSDMVLLL 1455 (1495)
Q Consensus 1406 LiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~t-i~~~DrIlVL 1455 (1495)
|||||||++||+.+...+.+.|++.. .++|+|+|+|+... ...||+++++
T Consensus 147 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 147 WILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999999999999998764 47999999998665 4569999887
No 433
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=342.27 Aligned_cols=202 Identities=29% Similarity=0.434 Sum_probs=171.7
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCC---cEEEEcCe----------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKIS---GTLKLCGT---------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~---G~v~~~g~---------- 682 (1495)
..++++|+++.|+.. .+++++|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 468999999999632 3469999999999999999999999999999999999999987 89999873
Q ss_pred ---EEEEccCCc--ccCccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHH
Q 000452 683 ---KAYVAQSPW--IQSGKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQR 750 (1495)
Q Consensus 683 ---~ayv~Q~~~--l~~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 750 (1495)
++|++|+|+ +++.|++|||.|+.. .+. ++..++++.++|.+.. +....+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYI-----------DSEPANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHh-----------cCCcccCCHHHHHH
Confidence 589999984 567899999988632 222 3355566667765433 45668999999999
Q ss_pred HHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hC-CCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHH
Q 000452 751 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LN-SKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDV 828 (1495)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l 828 (1495)
++||||++++|+++||||||++||+.+.+.+.+. +... .+ |+|||++||+++.+..||++++|++|++++.|+++++
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 230 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKL-IRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEI 230 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999998888764 4443 33 8999999999999877999999999999999999887
Q ss_pred Hh
Q 000452 829 IN 830 (1495)
Q Consensus 829 ~~ 830 (1495)
..
T Consensus 231 ~~ 232 (282)
T PRK13640 231 FS 232 (282)
T ss_pred hc
Confidence 64
No 434
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=344.52 Aligned_cols=204 Identities=24% Similarity=0.393 Sum_probs=166.2
Q ss_pred ccEEEEeeEEEecCCC--CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC------------
Q 000452 616 TAIEIADGNFSWDISS--HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------ 681 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~--~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g------------ 681 (1495)
..++++|++++|+... ..++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 3589999999996321 13599999999999999999999999999999999999999999998876
Q ss_pred ------eEEEEccCCc--ccCccHHHHHhcCCC---CCHH----HHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchH
Q 000452 682 ------TKAYVAQSPW--IQSGKIEDNILFGKE---MDRE----RYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGG 746 (1495)
Q Consensus 682 ------~~ayv~Q~~~--l~~~ti~enI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGG 746 (1495)
.++|++|+|. +++.|++||+.|+.. ...+ +..+.++.++|..+ ..++.+.+||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~----------~~~~~~~~LS~G 154 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPED----------YVKRSPFELSGG 154 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------HhcCChhhCCHH
Confidence 2589999984 567799999988632 2221 22233444433211 124677899999
Q ss_pred HHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh--CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEec
Q 000452 747 QKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAG 823 (1495)
Q Consensus 747 QkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g 823 (1495)
||||++||||++.+|+++||||||++||+.+.+.+++ ++.... .++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 155 q~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g 233 (289)
T PRK13645 155 QKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFIN-LFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIG 233 (289)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 9999999999999999999999999999999888875 444443 38999999999998764 9999999999999999
Q ss_pred ChHHHHh
Q 000452 824 KYTDVIN 830 (1495)
Q Consensus 824 ~~~~l~~ 830 (1495)
+++++.+
T Consensus 234 ~~~~~~~ 240 (289)
T PRK13645 234 SPFEIFS 240 (289)
T ss_pred CHHHHhc
Confidence 9888754
No 435
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=339.29 Aligned_cols=201 Identities=27% Similarity=0.447 Sum_probs=168.9
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------- 682 (1495)
+.++++|+++.|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 4 ~~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYG---EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEEC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 4699999999995 357999999999999999999999999999999999999999999998872
Q ss_pred -------------EEEEccCCcccC-ccHHHHHhcCC----CCCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCC
Q 000452 683 -------------KAYVAQSPWIQS-GKIEDNILFGK----EMDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERG 740 (1495)
Q Consensus 683 -------------~ayv~Q~~~l~~-~ti~enI~fg~----~~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g 740 (1495)
++|++|++.++. .|++||+.++. ..++ ++..+.++..++...+ .++..
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCCc
Confidence 699999998886 59999997642 1222 2334445544443221 14567
Q ss_pred CccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCcccc-CCEEEEEeCCE
Q 000452 741 INLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPA-ADLVLVIKDGK 818 (1495)
Q Consensus 741 ~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~ 818 (1495)
.+||||||||++||||++++|+++||||||++||+.+.+.+.+ ++..+. +|+|+|+|||+++++.. ||+|++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLR-IMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 8999999999999999999999999999999999999888875 444443 58999999999999886 99999999999
Q ss_pred EEEecChHHHHh
Q 000452 819 ITQAGKYTDVIN 830 (1495)
Q Consensus 819 i~~~g~~~~l~~ 830 (1495)
+++.|+++++..
T Consensus 230 i~~~~~~~~~~~ 241 (257)
T PRK10619 230 IEEEGAPEQLFG 241 (257)
T ss_pred EEEeCCHHHhhh
Confidence 999999988764
No 436
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.4e-35 Score=335.98 Aligned_cols=199 Identities=25% Similarity=0.379 Sum_probs=167.8
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------- 682 (1495)
.++++|+++.|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFD---GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcC---CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 478999999995 247999999999999999999999999999999999999999999999872
Q ss_pred EEEEccCCcccCc-cHHHHHhcCCCC---------------CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchH
Q 000452 683 KAYVAQSPWIQSG-KIEDNILFGKEM---------------DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGG 746 (1495)
Q Consensus 683 ~ayv~Q~~~l~~~-ti~enI~fg~~~---------------~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGG 746 (1495)
++|++|++.++.+ |++||+.++... ++++.++.++..++. ....+...+||||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G 147 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLA-----------DEADRLAGLLSHG 147 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCc-----------hhhcCChhhCCHH
Confidence 6899999988875 999999875321 112233344443332 2235677899999
Q ss_pred HHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecCh
Q 000452 747 QKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKY 825 (1495)
Q Consensus 747 QkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~ 825 (1495)
||||++||||++.+|+++||||||++||+.+.+.+.+ ++....+++|+|++||+++++.. ||++++|++|++++.|++
T Consensus 148 e~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~ 226 (242)
T TIGR03411 148 QKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAE-LLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSL 226 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHH-HHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCH
Confidence 9999999999999999999999999999999888865 55555557999999999999875 999999999999999999
Q ss_pred HHHHh
Q 000452 826 TDVIN 830 (1495)
Q Consensus 826 ~~l~~ 830 (1495)
+++..
T Consensus 227 ~~~~~ 231 (242)
T TIGR03411 227 DQVQA 231 (242)
T ss_pred HHHhc
Confidence 88753
No 437
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=337.67 Aligned_cols=199 Identities=26% Similarity=0.425 Sum_probs=168.6
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ 683 (1495)
.++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 78 (255)
T PRK11231 2 TLRTENLTVGYG---TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRL 78 (255)
T ss_pred EEEEEeEEEEEC---CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhhe
Confidence 378999999995 357999999999999999999999999999999999999999999999873 6
Q ss_pred EEEccCCcccCc-cHHHHHhcCCC-----C------CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHH
Q 000452 684 AYVAQSPWIQSG-KIEDNILFGKE-----M------DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRI 751 (1495)
Q Consensus 684 ayv~Q~~~l~~~-ti~enI~fg~~-----~------~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv 751 (1495)
+|++|++.++.+ |+.||+.++.. + +.++.+++++.+++.+.. ...+..||||||||+
T Consensus 79 ~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv 147 (255)
T PRK11231 79 ALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLA-----------DRRLTDLSGGQRQRA 147 (255)
T ss_pred EEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHH-----------cCCcccCCHHHHHHH
Confidence 899999887755 99999988631 1 123445556666664333 356789999999999
Q ss_pred HHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHH
Q 000452 752 QIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVI 829 (1495)
Q Consensus 752 ~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~ 829 (1495)
+||||++.+|+++||||||++||+.+.+.+.+. +... .+++|+|++||+++.+.. ||++++|++|+++..|+++++.
T Consensus 148 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 226 (255)
T PRK11231 148 FLAMVLAQDTPVVLLDEPTTYLDINHQVELMRL-MRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVM 226 (255)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhc
Confidence 999999999999999999999999998888754 4443 358999999999999765 9999999999999999988875
Q ss_pred h
Q 000452 830 N 830 (1495)
Q Consensus 830 ~ 830 (1495)
.
T Consensus 227 ~ 227 (255)
T PRK11231 227 T 227 (255)
T ss_pred C
Confidence 4
No 438
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-35 Score=337.92 Aligned_cols=199 Identities=21% Similarity=0.361 Sum_probs=166.5
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------- 682 (1495)
.++++|+++.|+ ++++|+|+||++++|++++|+||||||||||+++|.|+++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 589999999995 357999999999999999999999999999999999999999999999873
Q ss_pred EEEEccCCcccCc-cHHHHHhcCCC----------------CC------HHHHHHHHHHhCcHHHHhhcCCCCcccccCC
Q 000452 683 KAYVAQSPWIQSG-KIEDNILFGKE----------------MD------RERYNAVLDACSLEKDLEILSFGDQTVVGER 739 (1495)
Q Consensus 683 ~ayv~Q~~~l~~~-ti~enI~fg~~----------------~~------~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~ 739 (1495)
++|++|++.++.. |++||+.++.. .+ .++.++.++..++. ...+++
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~ 150 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLL-----------EHANRQ 150 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChh-----------hhhhCC
Confidence 5789999998875 99999997531 00 01223333333332 234577
Q ss_pred CCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hC-CCEEEEEecCCCcccc-CCEEEEEeC
Q 000452 740 GINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LN-SKTVLYVTHQVEFLPA-ADLVLVIKD 816 (1495)
Q Consensus 740 g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvIlvTH~~~~l~~-~d~i~~l~~ 816 (1495)
+.+||||||||++||||++.+|+++||||||++||+.+.+.+.+. +... .+ ++|+|++||+++.+.. ||++++|++
T Consensus 151 ~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 151 AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDEL-IAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 889999999999999999999999999999999999998888754 4443 33 7899999999999865 999999999
Q ss_pred CEEEEecChHHHHh
Q 000452 817 GKITQAGKYTDVIN 830 (1495)
Q Consensus 817 G~i~~~g~~~~l~~ 830 (1495)
|++++.|+.+++..
T Consensus 230 g~i~~~~~~~~~~~ 243 (255)
T PRK11300 230 GTPLANGTPEEIRN 243 (255)
T ss_pred CeEEecCCHHHHhh
Confidence 99999999888753
No 439
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-35 Score=339.79 Aligned_cols=205 Identities=25% Similarity=0.391 Sum_probs=172.2
Q ss_pred cccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCC-----CCcEEEEcC--------
Q 000452 615 ETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG-------- 681 (1495)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~-----~~G~v~~~g-------- 681 (1495)
+..++++|++++|+ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 17 ~~~l~~~nl~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYG---EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEEC---CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 35799999999995 25799999999999999999999999999999999999974 899999887
Q ss_pred -------eEEEEccCCcccCccHHHHHhcCCC---C--C----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccch
Q 000452 682 -------TKAYVAQSPWIQSGKIEDNILFGKE---M--D----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSG 745 (1495)
Q Consensus 682 -------~~ayv~Q~~~l~~~ti~enI~fg~~---~--~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSG 745 (1495)
.++|++|+|.+++.|++||+.++.. . . .++.+++++.+++.+++. +..++.+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 2589999999888899999987532 1 1 223455666666643321 123567889999
Q ss_pred HHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecC
Q 000452 746 GQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGK 824 (1495)
Q Consensus 746 GQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~ 824 (1495)
|||||++||||++.+|+++||||||++||+.+.+.+.+ ++....+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~ 245 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEE-LIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGD 245 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHH-HHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999887765 55555557899999999999865 99999999999999999
Q ss_pred hHHHHh
Q 000452 825 YTDVIN 830 (1495)
Q Consensus 825 ~~~l~~ 830 (1495)
.+++..
T Consensus 246 ~~~~~~ 251 (267)
T PRK14235 246 TEKMFT 251 (267)
T ss_pred HHHHHh
Confidence 988764
No 440
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=354.91 Aligned_cols=187 Identities=28% Similarity=0.423 Sum_probs=159.4
Q ss_pred CccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC-----------------eEEEEccCCcccC-c
Q 000452 634 PTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-----------------TKAYVAQSPWIQS-G 695 (1495)
Q Consensus 634 ~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g-----------------~~ayv~Q~~~l~~-~ 695 (1495)
++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++|++|++.++. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 479999999999999999999999999999999999999999999976 3689999998875 6
Q ss_pred cHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecC
Q 000452 696 KIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDD 768 (1495)
Q Consensus 696 ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDe 768 (1495)
|++||+.++.. ++ +++..++++.++|.+.. .....+|||||||||+|||||+.+|+++||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~-----------~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYA-----------HSYPDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh-----------hcCcccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999998642 22 23445556666664333 35667999999999999999999999999999
Q ss_pred cCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 769 PFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 769 p~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
||++||+.+.+.+.+.+..... .++|+|+|||+++++.. ||+|++|++|++++.|+++++...
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999888765443333 48999999999998764 999999999999999999998764
No 441
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-35 Score=338.14 Aligned_cols=204 Identities=25% Similarity=0.394 Sum_probs=169.9
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCC--C---CCcEEEEcCe---------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP--K---ISGTLKLCGT--------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~--~---~~G~v~~~g~--------- 682 (1495)
.++++|+++.|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.
T Consensus 12 ~l~i~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYG---QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEEC---CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 589999999995 2479999999999999999999999999999999999987 3 6999988763
Q ss_pred ------EEEEccCCcccCccHHHHHhcCCCC----CHH----HHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 683 ------KAYVAQSPWIQSGKIEDNILFGKEM----DRE----RYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 683 ------~ayv~Q~~~l~~~ti~enI~fg~~~----~~~----~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
++|++|++.+++.|++||+.++... +++ +.+++++..++.+.+. +..+..+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHH
Confidence 5899999999888999999876321 221 2334455555533221 234577889999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 827 (1495)
||++||||++.+|+++||||||++||+++...+.+ ++....+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 240 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEE-LILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNK 240 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999887764 56555567999999999999765 99999999999999999998
Q ss_pred HHhc
Q 000452 828 VINS 831 (1495)
Q Consensus 828 l~~~ 831 (1495)
+.+.
T Consensus 241 ~~~~ 244 (259)
T PRK14274 241 MFSN 244 (259)
T ss_pred HhhC
Confidence 8653
No 442
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=4e-35 Score=368.38 Aligned_cols=212 Identities=24% Similarity=0.380 Sum_probs=185.0
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHh-ccc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLR-TRL 1325 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR-~~i 1325 (1495)
.|+++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+..+++ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999964 3599999999999999999999999999999999999999999999999999888777665 469
Q ss_pred EEEcccCcCCCC-cHHHhcCCCCC---CCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHcc
Q 000452 1326 SIIPQDPVMFEG-TVRSNVDPLEE---YTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLK 1401 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLdp~~~---~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr 1401 (1495)
+|+||+|.+|.+ |+++|+..... ..++++.++++..++.+.. +.. ..+||||||||++|||||++
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~LSgG~~qrv~la~aL~~ 157 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLDL-------DSS----AGSLEVADRQIVEILRGLMR 157 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCccc-------cCC----hhhCCHHHHHHHHHHHHHHc
Confidence 999999998876 99999974221 1235677788888875432 222 34699999999999999999
Q ss_pred CCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1402 RRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1402 ~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
+|+||||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 158 DSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 999999999999999999999999998864 47899999999999865 99999999999999999998864
No 443
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8.7e-36 Score=299.27 Aligned_cols=198 Identities=28% Similarity=0.411 Sum_probs=177.5
Q ss_pred EEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcC
Q 000452 1255 VRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVM 1334 (1495)
Q Consensus 1255 ~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~L 1334 (1495)
.+|.....++|+|+||++.+||.++|.||||||||||++.+.-+..|++|.++..|.|+++++.+.+|++++|+-|.|.|
T Consensus 9 ~~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paL 88 (223)
T COG4619 9 VGYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPAL 88 (223)
T ss_pred HHhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccc
Confidence 35666666799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcHHHhcC-CC----CCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEE
Q 000452 1335 FEGTVRSNVD-PL----EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLD 1409 (1495)
Q Consensus 1335 F~GTIR~NLd-p~----~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLD 1409 (1495)
|.+||.+||- |. ...+...-.+-|+++++.+.+-. .+-.+||||||||++|+|-|---|+||+||
T Consensus 89 fg~tVeDNlifP~~~r~rr~dr~aa~~llar~~l~~~~L~----------k~it~lSGGE~QriAliR~Lq~~P~ILLLD 158 (223)
T COG4619 89 FGDTVEDNLIFPWQIRNRRPDRAAALDLLARFALPDSILT----------KNITELSGGEKQRIALIRNLQFMPKILLLD 158 (223)
T ss_pred cccchhhccccchHHhccCCChHHHHHHHHHcCCchhhhc----------chhhhccchHHHHHHHHHHhhcCCceEEec
Confidence 9999999996 43 23455566777888888766533 334689999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchh-hhccCEEEEEeCcEEEE
Q 000452 1410 EATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITS-VIDSDMVLLLSHGLIEE 1462 (1495)
Q Consensus 1410 EaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~t-i~~~DrIlVL~~G~ivE 1462 (1495)
|+||+||..+.+.|.+.|..++ ++..++.|||+... +..+||++.+..|++-|
T Consensus 159 E~TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~ 214 (223)
T COG4619 159 EITSALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGE 214 (223)
T ss_pred CchhhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcccc
Confidence 9999999999999999999988 46899999999987 88999999999998744
No 444
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=370.23 Aligned_cols=211 Identities=21% Similarity=0.323 Sum_probs=181.6
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC--CccEEEEcCEeCCCCCHHH-Hhc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP--AAGQILIDGIDISLIGLHD-LRT 1323 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep--~~G~I~IDG~dI~~i~l~~-LR~ 1323 (1495)
.|+++|++++|+. .++|+||||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+..+ .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 5999999999963 3599999999999999999999999999999999999996 8999999999998877654 467
Q ss_pred ccEEEcccCcCCCC-cHHHhcCCCC------CCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHH
Q 000452 1324 RLSIIPQDPVMFEG-TVRSNVDPLE------EYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQL 1392 (1495)
Q Consensus 1324 ~isiIpQdp~LF~G-TIR~NLdp~~------~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQr 1392 (1495)
+++|+||+|.+|.. |+++|+.... ..+ .+++.+++++.++.+.. +.. ..+||||||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~LSgGqkqr 151 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINP-------ATP----VGNLGLGQQQL 151 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCc-------ccc----hhhCCHHHHHH
Confidence 89999999998876 9999997421 112 23466777777764322 222 35799999999
Q ss_pred HHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1393 VCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1393 l~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
++|||||+.+|+|||||||||+||+++...+.+.|++.. ++.|||+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 231 (506)
T PRK13549 152 VEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMT 231 (506)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCC
Confidence 999999999999999999999999999999999998864 47899999999999875 9999999999999999998874
No 445
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.4e-35 Score=337.56 Aligned_cols=200 Identities=30% Similarity=0.427 Sum_probs=166.9
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC---------------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 681 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--------------- 681 (1495)
.++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFH---GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEEC---CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 488999999995 24799999999999999999999999999999999999999999998865
Q ss_pred ------eEEEEccCCcccC-ccHHHHHhcCC----CCCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchH
Q 000452 682 ------TKAYVAQSPWIQS-GKIEDNILFGK----EMDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGG 746 (1495)
Q Consensus 682 ------~~ayv~Q~~~l~~-~ti~enI~fg~----~~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGG 746 (1495)
.++|++|++.++. .|++||+.++. ..+. ++..+.++..++.. .....+.+||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~G 148 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAG-----------KETSYPRRLSGG 148 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcc-----------hhhCChhhCChH
Confidence 2689999998875 69999997642 1222 22334444444432 234677899999
Q ss_pred HHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecC
Q 000452 747 QKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGK 824 (1495)
Q Consensus 747 QkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~ 824 (1495)
||||++||||++.+|+++||||||++||+.+.+.+.+ ++.... +++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 149 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~ 227 (250)
T PRK11264 149 QQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLN-TIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGP 227 (250)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999888875 444443 48999999999999865 99999999999999999
Q ss_pred hHHHHhc
Q 000452 825 YTDVINS 831 (1495)
Q Consensus 825 ~~~l~~~ 831 (1495)
.+++.+.
T Consensus 228 ~~~~~~~ 234 (250)
T PRK11264 228 AKALFAD 234 (250)
T ss_pred HHHHhcC
Confidence 9887643
No 446
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.8e-35 Score=333.99 Aligned_cols=190 Identities=25% Similarity=0.398 Sum_probs=163.8
Q ss_pred eeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEEEcccCcCCC-CcHHHhc
Q 000452 1265 LRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFE-GTVRSNV 1343 (1495)
Q Consensus 1265 L~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isiIpQdp~LF~-GTIR~NL 1343 (1495)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+++||+|.+|. .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 579999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CCC-----CCCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCC
Q 000452 1344 DPL-----EEYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATAS 1414 (1495)
Q Consensus 1344 dp~-----~~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTss 1414 (1495)
... ...++ +++.++++.+++.+...+ ....||||||||++|||||+++|++|||||||++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 144 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRAIVEEHIALVGLTEAADK-----------RPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGA 144 (230)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcC-----------ChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 531 22332 236777888887654333 2357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHh
Q 000452 1415 VDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLL 1470 (1495)
Q Consensus 1415 lD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll 1470 (1495)
||+.+...+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|++.+++
T Consensus 145 LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 145 LDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 99999999999998864 37899999999998865 9999999999999999887663
No 447
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-35 Score=335.64 Aligned_cols=199 Identities=28% Similarity=0.430 Sum_probs=168.6
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ 683 (1495)
.++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+.+|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLG---GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 478999999996 257999999999999999999999999999999999999999999999883 5
Q ss_pred EEEccCCcc-cCccHHHHHhcCCC-C------CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHH
Q 000452 684 AYVAQSPWI-QSGKIEDNILFGKE-M------DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIAR 755 (1495)
Q Consensus 684 ayv~Q~~~l-~~~ti~enI~fg~~-~------~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LAR 755 (1495)
+|++|++.+ +..|++||+.++.. . .+++.++.++..++.+.. .....+||||||||++|||
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgGe~qrv~la~ 147 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLA-----------GRDYPQLSGGEQQRVQLAR 147 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHh-----------cCCcccCCHHHHHHHHHHH
Confidence 899999887 56799999987632 1 123445566666664332 3567899999999999999
Q ss_pred Hhc------cCCCEeEecCcCCccCHHHHHHHHHHHHHHHh--CCCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChH
Q 000452 756 ALY------QDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--NSKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 756 Al~------~~~~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~ 826 (1495)
|++ .+|+++||||||++||+.+.+.+.+ ++.... +++|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 148 al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 226 (258)
T PRK13548 148 VLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLR-LARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPA 226 (258)
T ss_pred HHhcccccCCCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHH
Confidence 999 5999999999999999999888865 454443 5899999999999987 49999999999999999998
Q ss_pred HHHh
Q 000452 827 DVIN 830 (1495)
Q Consensus 827 ~l~~ 830 (1495)
++..
T Consensus 227 ~~~~ 230 (258)
T PRK13548 227 EVLT 230 (258)
T ss_pred HHhC
Confidence 8764
No 448
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.6e-35 Score=333.07 Aligned_cols=197 Identities=28% Similarity=0.476 Sum_probs=164.2
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC--------------eE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------TK 683 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--------------~~ 683 (1495)
++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYG---QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeC---CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 46899999996 24799999999999999999999999999999999999999999999986 26
Q ss_pred EEEccCCcccCc-cHHHHHhcCCCC---C-HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhc
Q 000452 684 AYVAQSPWIQSG-KIEDNILFGKEM---D-RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALY 758 (1495)
Q Consensus 684 ayv~Q~~~l~~~-ti~enI~fg~~~---~-~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 758 (1495)
+|++|++.++.. |++||+.++... + .+.++++++..+.. .....+...+||||||||++||||++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~l----------~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPVL----------KEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHhH----------HHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 899999988765 999999876321 1 22334444433211 11234677899999999999999999
Q ss_pred cCCCEeEecCcCCccCHHHHHHHHHHHHHHHh--CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHH
Q 000452 759 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDV 828 (1495)
Q Consensus 759 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l 828 (1495)
++|+++||||||++||+.+.+++.+. +.... .++|+|++||+++++.. ||++++|++|++++.|+.+++
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRV-IRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999998888754 44443 37999999999999875 999999999999999998876
No 449
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=4.2e-35 Score=312.86 Aligned_cols=159 Identities=30% Similarity=0.528 Sum_probs=148.1
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHH-HHhcccE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLH-DLRTRLS 1326 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~-~LR~~is 1326 (1495)
|+++|++++|+.. ++|+|+||+|++||.++|+|++|||||||+++|.|+++|++|+|.+||.++...+.. ..|++++
T Consensus 1 l~~~~l~~~~~~~--~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGGV--KALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECCe--EEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 5789999999643 599999999999999999999999999999999999999999999999999988764 4678899
Q ss_pred EEcccCcCCCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCCCeE
Q 000452 1327 IIPQDPVMFEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKIL 1406 (1495)
Q Consensus 1327 iIpQdp~LF~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~~IL 1406 (1495)
|+|| ||+|||||++||||++++|++|
T Consensus 79 ~~~q------------------------------------------------------LS~G~~qrl~laral~~~p~il 104 (163)
T cd03216 79 MVYQ------------------------------------------------------LSVGERQMVEIARALARNARLL 104 (163)
T ss_pred EEEe------------------------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 9999 8999999999999999999999
Q ss_pred EEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEE
Q 000452 1407 MLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEE 1462 (1495)
Q Consensus 1407 iLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE 1462 (1495)
+|||||++||.++.+.+.+.|++.. ++.|+|+++|+++.+.. ||++++|++|++++
T Consensus 105 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 105 ILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999998874 47899999999998765 99999999999976
No 450
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.3e-35 Score=346.96 Aligned_cols=206 Identities=26% Similarity=0.442 Sum_probs=171.0
Q ss_pred ccEEEEeeEEEecCCC----------CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe---
Q 000452 616 TAIEIADGNFSWDISS----------HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~----------~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--- 682 (1495)
..++++|++++|+... ..++++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 7 ~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~ 86 (331)
T PRK15079 7 VLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLL 86 (331)
T ss_pred ceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECC
Confidence 4699999999996321 246899999999999999999999999999999999999999999999773
Q ss_pred -------------EEEEccCCc--cc-CccHHHHHhcCC-----CCCH----HHHHHHHHHhCcHHHHhhcCCCCccccc
Q 000452 683 -------------KAYVAQSPW--IQ-SGKIEDNILFGK-----EMDR----ERYNAVLDACSLEKDLEILSFGDQTVVG 737 (1495)
Q Consensus 683 -------------~ayv~Q~~~--l~-~~ti~enI~fg~-----~~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig 737 (1495)
++||+|+|. ++ ..||.|||.++. ..++ ++..+.++.+++.++ ...
T Consensus 87 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~----------~~~ 156 (331)
T PRK15079 87 GMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPN----------LIN 156 (331)
T ss_pred cCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChH----------Hhc
Confidence 689999983 44 579999997531 2332 233445555555322 235
Q ss_pred CCCCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh--CCCEEEEEecCCCcccc-CCEEEEE
Q 000452 738 ERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--NSKTVLYVTHQVEFLPA-ADLVLVI 814 (1495)
Q Consensus 738 ~~g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvIlvTH~~~~l~~-~d~i~~l 814 (1495)
..+.+|||||||||+|||||+.+|+++|+||||++||+.+..++.+. +..+. .+.|+|+||||++.+.. ||+|++|
T Consensus 157 ~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~l-L~~l~~~~~~til~iTHdl~~~~~~~dri~vl 235 (331)
T PRK15079 157 RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNL-LQQLQREMGLSLIFIAHDLAVVKHISDRVLVM 235 (331)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 67789999999999999999999999999999999999999998764 44433 38999999999999875 9999999
Q ss_pred eCCEEEEecChHHHHhcC
Q 000452 815 KDGKITQAGKYTDVINSG 832 (1495)
Q Consensus 815 ~~G~i~~~g~~~~l~~~~ 832 (1495)
++|+|++.|+.+++.+..
T Consensus 236 ~~G~ive~g~~~~i~~~~ 253 (331)
T PRK15079 236 YLGHAVELGTYDEVYHNP 253 (331)
T ss_pred ECCEEEEEcCHHHHHcCC
Confidence 999999999999987653
No 451
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-35 Score=339.46 Aligned_cols=203 Identities=26% Similarity=0.405 Sum_probs=172.7
Q ss_pred cEEEEeeEEEecCCC---CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------
Q 000452 617 AIEIADGNFSWDISS---HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT----------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~---~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~----------- 682 (1495)
.++++|++++|+... .+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 589999999996321 357999999999999999999999999999999999999999999999872
Q ss_pred ---EEEEccCCc--ccCccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHH
Q 000452 683 ---KAYVAQSPW--IQSGKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQR 750 (1495)
Q Consensus 683 ---~ayv~Q~~~--l~~~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 750 (1495)
++|++|+|. ++..|+.||+.|+.. .+ +++.+++++.++|.+.. .....+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYR-----------RHAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHh-----------hCCcccCCHHHHHH
Confidence 589999985 556789999998632 22 23456667777776544 35668999999999
Q ss_pred HHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHH
Q 000452 751 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDV 828 (1495)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l 828 (1495)
++||||++.+|+++||||||++||+.+.+.+.+ ++..+ . .++|+|++||+++.+..||++++|++|+++..|+++++
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVN-TIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEI 231 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999988875 45444 3 38999999999999877999999999999999999988
Q ss_pred Hhc
Q 000452 829 INS 831 (1495)
Q Consensus 829 ~~~ 831 (1495)
...
T Consensus 232 ~~~ 234 (280)
T PRK13633 232 FKE 234 (280)
T ss_pred hcC
Confidence 653
No 452
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-35 Score=333.51 Aligned_cols=199 Identities=24% Similarity=0.416 Sum_probs=166.6
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC--------------e
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------T 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--------------~ 682 (1495)
.++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYK---GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 478999999995 25799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEccCCcccC-ccHHHHHhcCCC----CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 KAYVAQSPWIQS-GKIEDNILFGKE----MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 ~ayv~Q~~~l~~-~ti~enI~fg~~----~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
++|++|++.++. .|++||+.++.. .++ ++.++.++..++.. ....+..+||||||||++|
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~l 148 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEH-----------LRDSMGQSLSGGERRRVEI 148 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHH-----------HhhcchhhCCHHHHHHHHH
Confidence 689999998776 599999987532 122 23344444444322 2356778999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
|||++.+|+++||||||++||+.+.+.+.+ ++.... +++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 149 ARALAANPKFILLDEPFAGVDPISVIDIKR-IIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 999999999999999999999999888765 444443 58999999999988765 99999999999999999988754
No 453
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.4e-34 Score=383.69 Aligned_cols=208 Identities=26% Similarity=0.275 Sum_probs=149.6
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHH---------HHhccccCCc----c----EEEEc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQ---------TLFRIVEPAA----G----QILID 1309 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~---------~L~rl~ep~~----G----~I~ID 1309 (1495)
.++++|++. ..|+|+|++|++||.+||.|++|||||||++ .|.|...+.. + -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 588888862 2799999999999999999999999999999 4445332211 1 24555
Q ss_pred CEeCCCCC----H------HHHhc---------cc-----EEEccc------------------C---------------
Q 000452 1310 GIDISLIG----L------HDLRT---------RL-----SIIPQD------------------P--------------- 1332 (1495)
Q Consensus 1310 G~dI~~i~----l------~~LR~---------~i-----siIpQd------------------p--------------- 1332 (1495)
-.+|..-+ . +++|+ +. .+..|. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 55444321 1 14551 11 112221 1
Q ss_pred -----cCCCC-cHHHhcCCCCC-C-----CHHHHHH---HHHHcCCcHHHHhccCCcccc-cccCCCCCCchHHHHHHHH
Q 000452 1333 -----VMFEG-TVRSNVDPLEE-Y-----TDEQIWE---ALDKCQLGDEVRKKEGKLDSK-VTENGENWSMGQRQLVCLG 1396 (1495)
Q Consensus 1333 -----~LF~G-TIR~NLdp~~~-~-----sd~ei~~---aL~~~~L~~~v~~lp~gLdt~-v~e~G~nLS~GQrQrl~LA 1396 (1495)
+.+.+ ||.|||+.... + +.+++.+ +|+.+ |++.. .+.....||||||||++||
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l~~L~~v-----------GL~~l~l~q~~~tLSGGE~QRV~LA 821 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIHALCSL-----------GLDYLPLGRPLSSLSGGEIQRLKLA 821 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHHHHHHHc-----------CCcchhhcCccccCCHHHHHHHHHH
Confidence 13444 78888864311 1 1223332 33333 34332 4555678999999999999
Q ss_pred HHHc---cCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhccCEEEEEe------CcEEEEecCh
Q 000452 1397 RVLL---KRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVIDSDMVLLLS------HGLIEEYDSP 1466 (1495)
Q Consensus 1397 RALL---r~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~~DrIlVL~------~G~ivE~gsp 1466 (1495)
|||+ ++|++|||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|+ +|++++.|+|
T Consensus 822 raL~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 822 YELLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred HHHhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 9998 5999999999999999999999999998864 4789999999999998899999996 7999999999
Q ss_pred hHHhhc
Q 000452 1467 RKLLEN 1472 (1495)
Q Consensus 1467 ~~Ll~~ 1472 (1495)
+++...
T Consensus 902 eel~~~ 907 (1809)
T PRK00635 902 EELIHL 907 (1809)
T ss_pred HHHHhc
Confidence 999863
No 454
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-35 Score=337.03 Aligned_cols=204 Identities=26% Similarity=0.413 Sum_probs=170.2
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCC---CCC--CCcEEEEcC----------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGE---VPK--ISGTLKLCG---------- 681 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~---~~~--~~G~v~~~g---------- 681 (1495)
.++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+ .+| ++|+|.++|
T Consensus 3 ~l~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYG---DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEEC---CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 589999999995 25699999999999999999999999999999999996 454 589998876
Q ss_pred -----eEEEEccCCcccCccHHHHHhcCCCC----C----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 682 -----TKAYVAQSPWIQSGKIEDNILFGKEM----D----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 682 -----~~ayv~Q~~~l~~~ti~enI~fg~~~----~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
.++|+||++.+++.|++||+.++... + +++.+++++.+++.++++ +..++.+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCHHHH
Confidence 26999999998888999999875321 1 123455566666543332 224577889999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 827 (1495)
||++||||++.+|+++||||||++||+.+.+.+.+ ++....+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~ 231 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEE-LIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKK 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999888865 45555568999999999999865 99999999999999999999
Q ss_pred HHhc
Q 000452 828 VINS 831 (1495)
Q Consensus 828 l~~~ 831 (1495)
+.++
T Consensus 232 ~~~~ 235 (250)
T PRK14245 232 IFTN 235 (250)
T ss_pred HhcC
Confidence 8653
No 455
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=3e-35 Score=331.07 Aligned_cols=197 Identities=26% Similarity=0.391 Sum_probs=164.2
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------- 682 (1495)
..++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.
T Consensus 6 ~~i~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (225)
T PRK10247 6 PLLQLQNVGYLAG---DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQ 82 (225)
T ss_pred ceEEEeccEEeeC---CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhc
Confidence 3699999999995 357999999999999999999999999999999999999999999999873
Q ss_pred EEEEccCCcccCccHHHHHhcCCC-----CCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 683 KAYVAQSPWIQSGKIEDNILFGKE-----MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 683 ~ayv~Q~~~l~~~ti~enI~fg~~-----~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
++|++|++.+++.|++||+.++.. .++++.++.++.+++.+ +...+.+.+||||||||++||||+
T Consensus 83 i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~laral 152 (225)
T PRK10247 83 VSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLIRNL 152 (225)
T ss_pred cEEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHHHHH
Confidence 689999999998899999986421 12233445555555432 223577889999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCccccCCEEEEEe-CCEEEEecChH
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPAADLVLVIK-DGKITQAGKYT 826 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~~d~i~~l~-~G~i~~~g~~~ 826 (1495)
+++|+++||||||++||+.+.+.+.+ ++... . .++|+|++||++++++.||++++|+ ++..+++|+|+
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 153 QFMPKVLLLDEITSALDESNKHNVNE-IIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999887765 45444 3 3789999999999988899999995 66667777764
No 456
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-35 Score=339.30 Aligned_cols=203 Identities=27% Similarity=0.427 Sum_probs=171.5
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ 683 (1495)
.++++|++++|+.....++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 589999999996322346999999999999999999999999999999999999999999999873 5
Q ss_pred EEEccCCc--ccCccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHH
Q 000452 684 AYVAQSPW--IQSGKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIA 754 (1495)
Q Consensus 684 ayv~Q~~~--l~~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 754 (1495)
+|++|+|. ++..|+.|||.++.. ..+ ++++++++.+++.+.. ......||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFK-----------TREPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHh-----------hCCcccCCHHHHHHHHHH
Confidence 89999984 667899999987532 222 2345666666665332 346789999999999999
Q ss_pred HHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-C-CCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000452 755 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-N-SKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
||++.+|+++||||||++||+.+.+.+.+ ++..+. + |+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMR-VIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999888875 444443 3 8999999999999878999999999999999999888653
No 457
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-35 Score=338.12 Aligned_cols=200 Identities=24% Similarity=0.355 Sum_probs=168.9
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------- 682 (1495)
..++++|++++|+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 10 ~~l~i~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 86 (265)
T PRK10575 10 TTFALRNVSFRVP---GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARK 86 (265)
T ss_pred ceEEEeeEEEEEC---CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhh
Confidence 4699999999995 247999999999999999999999999999999999999999999999882
Q ss_pred EEEEccCCcccC-ccHHHHHhcCCC--------C---CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHH
Q 000452 683 KAYVAQSPWIQS-GKIEDNILFGKE--------M---DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQR 750 (1495)
Q Consensus 683 ~ayv~Q~~~l~~-~ti~enI~fg~~--------~---~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 750 (1495)
++|++|++.++. .|+.||+.++.. . ++++.++.++.+++.+.+ .....+||||||||
T Consensus 87 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qr 155 (265)
T PRK10575 87 VAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLA-----------HRLVDSLSGGERQR 155 (265)
T ss_pred eEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHh-----------cCCcccCCHHHHHH
Confidence 689999976654 599999987531 1 123455666777665433 34567899999999
Q ss_pred HHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hC-CCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000452 751 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LN-SKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 827 (1495)
++||||+..+|+++||||||++||+.+.+.+.+ ++... .+ ++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~~~~-~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~ 234 (265)
T PRK10575 156 AWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLA-LVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAE 234 (265)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHH
Confidence 999999999999999999999999999888765 44444 33 7999999999999864 99999999999999999888
Q ss_pred HHh
Q 000452 828 VIN 830 (1495)
Q Consensus 828 l~~ 830 (1495)
+..
T Consensus 235 ~~~ 237 (265)
T PRK10575 235 LMR 237 (265)
T ss_pred hcC
Confidence 754
No 458
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.5e-35 Score=329.52 Aligned_cols=188 Identities=29% Similarity=0.414 Sum_probs=158.2
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------------- 682 (1495)
++++|+++.|+. .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~~--~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPN--GTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCC--CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 468999999952 247999999999999999999999999999999999999999999998873
Q ss_pred -EEEEccCCcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 -KAYVAQSPWIQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 -~ayv~Q~~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
++|++|++.++. .|++||+.++.. .+ +++.++.++.+++++.+ .....+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKH-----------RALPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCChhhcCHHHHHHHHH
Confidence 689999998876 599999987532 12 23445566666665433 34567999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEE
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKI 819 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i 819 (1495)
|||++.+|+++||||||++||+++.+.+.+. +... .+++|+|++||+++.+.. ||++++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~-l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNL-LKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999998888754 4443 358999999999999875 999999999974
No 459
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-35 Score=339.39 Aligned_cols=199 Identities=25% Similarity=0.376 Sum_probs=166.7
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------------- 682 (1495)
++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~---~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQ---DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcC---CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 68899999995 357999999999999999999999999999999999999999999998772
Q ss_pred EEEEccCCc--ccCccHHHHHhcCC---CCCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 KAYVAQSPW--IQSGKIEDNILFGK---EMDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 ~ayv~Q~~~--l~~~ti~enI~fg~---~~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
++|++|++. ++..|+.+|+.++. ..++ ++.+++++.+++.... .....+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-----------HQPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-----------cCCchhCCHHHHHHHHH
Confidence 589999985 46678999998742 1222 2334455555554322 35678999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
||||+.+|+++||||||++||+.+...+.+ ++... .+++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIA-IIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999888875 44444 358999999999999865 999999999999999999887543
No 460
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-35 Score=337.47 Aligned_cols=205 Identities=25% Similarity=0.370 Sum_probs=170.8
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCC-----CCCcEEEEcCe--------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCGT-------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~-----~~~G~v~~~g~-------- 682 (1495)
..++++|++++|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++ |++|+|.++|.
T Consensus 12 ~~l~i~nl~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYG---TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEEC---CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 4699999999995 2469999999999999999999999999999999999987 68999998762
Q ss_pred -------EEEEccCCcccCccHHHHHhcCCCC---C---HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHH
Q 000452 683 -------KAYVAQSPWIQSGKIEDNILFGKEM---D---RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQ 749 (1495)
Q Consensus 683 -------~ayv~Q~~~l~~~ti~enI~fg~~~---~---~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 749 (1495)
++|++|++.++..|++||+.++... + +++.+++++.+++...++ ........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCHHHHH
Confidence 6899999998888999999986432 1 233344555554432221 2345678899999999
Q ss_pred HHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeC-----------C
Q 000452 750 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKD-----------G 817 (1495)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~-----------G 817 (1495)
|++||||++.+|+++||||||++||+.+.+++.+ ++....+++|+|++||+++++.. ||++++|++ |
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~-~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g 240 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEE-TMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVG 240 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccc
Confidence 9999999999999999999999999999888875 45555567899999999998865 999999996 6
Q ss_pred EEEEecChHHHHhc
Q 000452 818 KITQAGKYTDVINS 831 (1495)
Q Consensus 818 ~i~~~g~~~~l~~~ 831 (1495)
++++.|+.+++.+.
T Consensus 241 ~~~~~~~~~~~~~~ 254 (269)
T PRK14259 241 YLVEFNETKKIFNS 254 (269)
T ss_pred eEEEeCCHHHHHhC
Confidence 78999999888653
No 461
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-35 Score=338.10 Aligned_cols=202 Identities=24% Similarity=0.379 Sum_probs=168.9
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ 683 (1495)
.++++|++++|+.. .+++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 58999999999632 246999999999999999999999999999999999999999999999883 5
Q ss_pred EEEccCCc--ccCccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHH
Q 000452 684 AYVAQSPW--IQSGKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIA 754 (1495)
Q Consensus 684 ayv~Q~~~--l~~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 754 (1495)
+|++|+|+ ++..|+++|+.|+.. ... ++.+++++..++.+.. ..++.+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERA-----------DYEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCCcccCCHHHHHHHHHH
Confidence 89999985 456789999988632 222 2334445555543322 356789999999999999
Q ss_pred HHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-C-CCEEEEEecCCCccccCCEEEEEeCCEEEEecChHHHHhc
Q 000452 755 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-N-SKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
||++.+|+++||||||++||+.+.+.+++ ++.... + ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLD-LVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999888876 454443 3 7899999999998877999999999999999999887643
No 462
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=5.2e-35 Score=330.16 Aligned_cols=194 Identities=28% Similarity=0.412 Sum_probs=162.3
Q ss_pred cEEEEeeEEEecCCCC-CCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC--------------
Q 000452 617 AIEIADGNFSWDISSH-NPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG-------------- 681 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~-~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g-------------- 681 (1495)
.++++|++++|+.... .++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 5899999999963221 3599999999999999999999999999999999999999999999876
Q ss_pred ---eEEEEccCCcccC-ccHHHHHhcCC---CCC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHH
Q 000452 682 ---TKAYVAQSPWIQS-GKIEDNILFGK---EMD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQR 750 (1495)
Q Consensus 682 ---~~ayv~Q~~~l~~-~ti~enI~fg~---~~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqR 750 (1495)
.++|++|++.++. .|++||+.++. ..+ +++.++.++.+++.+.++ ....+||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLD-----------HLPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CChhhCCHHHHHH
Confidence 3689999998876 59999998642 111 234556677776654333 4567899999999
Q ss_pred HHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hC-CCEEEEEecCCCccccCCEEEEEeCCEEEEe
Q 000452 751 IQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LN-SKTVLYVTHQVEFLPAADLVLVIKDGKITQA 822 (1495)
Q Consensus 751 v~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~ 822 (1495)
++||||++.+|+++||||||++||+.+.+.+++. +... .+ ++|||++||+++++..||++++|++|++++.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADL-LFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999998888754 4443 33 7899999999998877999999999999753
No 463
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-35 Score=338.30 Aligned_cols=205 Identities=23% Similarity=0.340 Sum_probs=169.3
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCC-----CCCcEEEEcC---------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG--------- 681 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~-----~~~G~v~~~g--------- 681 (1495)
..++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 20 ~~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 96 (268)
T PRK14248 20 HILEVKDLSIYYG---EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN 96 (268)
T ss_pred ceEEEEEEEEEeC---CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc
Confidence 4699999999995 3579999999999999999999999999999999999864 6899998876
Q ss_pred ------eEEEEccCCcccCccHHHHHhcCCCC----C----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHH
Q 000452 682 ------TKAYVAQSPWIQSGKIEDNILFGKEM----D----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQ 747 (1495)
Q Consensus 682 ------~~ayv~Q~~~l~~~ti~enI~fg~~~----~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 747 (1495)
.++|++|++.+++.|++||+.++... . +++..+.++.+++..++ ....+..+.+|||||
T Consensus 97 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq 169 (268)
T PRK14248 97 VVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEV-------KDRLHSSALSLSGGQ 169 (268)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcch-------HHHHhcCcccCCHHH
Confidence 26899999999988999999875321 1 12233344444443211 123457788999999
Q ss_pred HHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChH
Q 000452 748 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 826 (1495)
|||++||||++++|+++||||||++||+.+.+.+.+ ++....+++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 170 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~ 248 (268)
T PRK14248 170 QQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEE-LITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTE 248 (268)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHH-HHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999888865 55555557899999999998764 9999999999999999998
Q ss_pred HHHhc
Q 000452 827 DVINS 831 (1495)
Q Consensus 827 ~l~~~ 831 (1495)
++...
T Consensus 249 ~~~~~ 253 (268)
T PRK14248 249 QIFTS 253 (268)
T ss_pred HHHhC
Confidence 87654
No 464
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-35 Score=331.44 Aligned_cols=205 Identities=20% Similarity=0.320 Sum_probs=164.7
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------- 682 (1495)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYG---KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeC---CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 589999999995 357999999999999999999999999999999999999999999999873
Q ss_pred EEEEccCCcccC-ccHHHHHhcCCCC-CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccC
Q 000452 683 KAYVAQSPWIQS-GKIEDNILFGKEM-DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQD 760 (1495)
Q Consensus 683 ~ayv~Q~~~l~~-~ti~enI~fg~~~-~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~ 760 (1495)
++|++|++.++. .|++||+.++... +.+..++.++ +-++.++..+. ...+...+||||||||++||||++.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~l~~~~~l~~-~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIK-----WVYELFPRLHE-RRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHH-----HHHHHHHHHHH-HHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 589999998876 5999999876421 2222221111 11111110111 12356789999999999999999999
Q ss_pred CCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000452 761 ADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 761 ~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
|+++||||||++||+.+.+.+.+.+.....+++|+|++||+++++.. ||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999888876443323358999999999998754 99999999999999999988853
No 465
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.2e-35 Score=329.85 Aligned_cols=188 Identities=24% Similarity=0.388 Sum_probs=157.9
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------------- 682 (1495)
++++|++++|+. ++++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 689999999942 357999999999999999999999999999999999999999999998772
Q ss_pred -EEEEccCCcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 -KAYVAQSPWIQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 -~ayv~Q~~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
++|++|+|.++. .|++||+.++.. .+ +++.++.++..++.+.+ .....+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKA-----------DAFPEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHHHHHH
Confidence 589999998875 699999987521 22 23455666666665433 24557999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCE
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGK 818 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~ 818 (1495)
|||++.+|+++||||||++||+.+...+.+.+.....+++|+|++||+++++.. ||++++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999888876443322358999999999999875 99999999985
No 466
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-35 Score=335.91 Aligned_cols=204 Identities=27% Similarity=0.418 Sum_probs=169.2
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCC--CC---CCcEEEEcC----------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEV--PK---ISGTLKLCG---------- 681 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~--~~---~~G~v~~~g---------- 681 (1495)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+. +| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYN---KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 589999999996 257999999999999999999999999999999999985 36 599999876
Q ss_pred -----eEEEEccCCcccCccHHHHHhcCCC---C-CH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 682 -----TKAYVAQSPWIQSGKIEDNILFGKE---M-DR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 682 -----~~ayv~Q~~~l~~~ti~enI~fg~~---~-~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
.++|++|++.+++.|++||+.++.. . ++ ++..++++.+++.+.+. +..++.+.+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHH
Confidence 2689999999998999999987521 1 11 22334455555433221 234577889999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 827 (1495)
||++||||++.+|+++||||||++||+.+.+.+++ ++....+++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEE-TLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQ 233 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHH-HHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999888875 45555557899999999998764 99999999999999999988
Q ss_pred HHhc
Q 000452 828 VINS 831 (1495)
Q Consensus 828 l~~~ 831 (1495)
+.+.
T Consensus 234 ~~~~ 237 (252)
T PRK14239 234 MFMN 237 (252)
T ss_pred HHhC
Confidence 8654
No 467
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-35 Score=326.48 Aligned_cols=189 Identities=31% Similarity=0.447 Sum_probs=159.4
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EEEE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 686 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~ayv 686 (1495)
|+++|++++|+. +. .|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 75 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSML 75 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEE
Confidence 468999999952 22 3999999999999999999999999999999999999999999883 6999
Q ss_pred ccCCcccC-ccHHHHHhcCCCC-------CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhc
Q 000452 687 AQSPWIQS-GKIEDNILFGKEM-------DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALY 758 (1495)
Q Consensus 687 ~Q~~~l~~-~ti~enI~fg~~~-------~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 758 (1495)
+|++.++. .|++||+.++... ++++..++++.+++.+..+ ....+||||||||++||||++
T Consensus 76 ~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~ia~al~ 144 (211)
T cd03298 76 FQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEK-----------RLPGELSGGERQRVALARVLV 144 (211)
T ss_pred ecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHHHHHHHHh
Confidence 99999886 4999999876421 2335566677777754443 456799999999999999999
Q ss_pred cCCCEeEecCcCCccCHHHHHHHHHHHHHHHh--CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEec
Q 000452 759 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAG 823 (1495)
Q Consensus 759 ~~~~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g 823 (1495)
.+|+++||||||++||+.+.+.+.+. +.... +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 ~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 145 RDKPVLLLDEPFAALDPALRAEMLDL-VLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999998888754 44443 38999999999999865 9999999999998654
No 468
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.8e-35 Score=368.34 Aligned_cols=212 Identities=21% Similarity=0.304 Sum_probs=180.9
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHH-Hhccc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHD-LRTRL 1325 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~-LR~~i 1325 (1495)
.|+++|++++|.. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999997765544 46789
Q ss_pred EEEcccCcCCCC-cHHHhcCCCC-------CCCH----HHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHH
Q 000452 1326 SIIPQDPVMFEG-TVRSNVDPLE-------EYTD----EQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLV 1393 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLdp~~-------~~sd----~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl 1393 (1495)
+|+||+|.+|.. |+++|+.... ..+. +++.++++.+++.+. +|.+ ..+||||||||+
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~----~~~LSgG~~qrv 150 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFS-------SDKL----VGELSIGEQQMV 150 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCC-------ccCc----hhhCCHHHHHHH
Confidence 999999988876 9999997421 1222 345667777776533 2322 246999999999
Q ss_pred HHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhHHhh
Q 000452 1394 CLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1394 ~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~Ll~ 1471 (1495)
+|||||+.+|++|+|||||++||+.+...+.+.|++.. .+.|||+|+|+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (501)
T PRK10762 151 EIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE 230 (501)
T ss_pred HHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH
Confidence 99999999999999999999999999999999998763 36899999999999865 99999999999999999887643
No 469
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-35 Score=337.04 Aligned_cols=205 Identities=24% Similarity=0.407 Sum_probs=170.3
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCC-----CCcEEEEcCe--------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCGT-------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~-----~~G~v~~~g~-------- 682 (1495)
..++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.
T Consensus 11 ~~l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 87 (258)
T PRK14268 11 PQIKVENLNLWYG---EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD 87 (258)
T ss_pred eeEEEeeeEEEeC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch
Confidence 4699999999995 35799999999999999999999999999999999999975 7999998762
Q ss_pred -------EEEEccCCcccCccHHHHHhcCCC---CCHH----HHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 683 -------KAYVAQSPWIQSGKIEDNILFGKE---MDRE----RYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 683 -------~ayv~Q~~~l~~~ti~enI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
++|++|++.+++.|++||+.|+.. .+.+ +.+++++.+++..++ .....+.+.+||||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~ 160 (258)
T PRK14268 88 VVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQ 160 (258)
T ss_pred HHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHH
Confidence 589999999888999999987532 2222 234455555543221 1223567889999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 827 (1495)
||++||||++.+|+++||||||++||+.+...+.+ ++....+++|+|++||+++.+.. ||++++|++|++++.|++++
T Consensus 161 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 239 (258)
T PRK14268 161 QRLCIARTLAVKPKIILFDEPTSALDPISTARIED-LIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQ 239 (258)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHH-HHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999888865 45555567999999999999865 99999999999999999988
Q ss_pred HHhc
Q 000452 828 VINS 831 (1495)
Q Consensus 828 l~~~ 831 (1495)
+...
T Consensus 240 ~~~~ 243 (258)
T PRK14268 240 IFHN 243 (258)
T ss_pred HhcC
Confidence 8643
No 470
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=333.14 Aligned_cols=198 Identities=28% Similarity=0.402 Sum_probs=165.4
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------- 682 (1495)
.++++|+++.|+ ++++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|.
T Consensus 2 ~l~~~~l~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYG---AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEEC---CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 378999999995 257999999999999999999999999999999999999999999998763
Q ss_pred -----EEEEccCCcccC-ccHHHHHhcCC----CCC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 683 -----KAYVAQSPWIQS-GKIEDNILFGK----EMD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 683 -----~ayv~Q~~~l~~-~ti~enI~fg~----~~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
++|++|++.++. .|++|||.++. ... .++..+.++..+++. ..+....+||||||
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~G~~ 147 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKP-----------YADRFPLHLSGGQQ 147 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHH
Confidence 589999998876 59999996421 111 123344444444433 23466789999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 826 (1495)
||++||||++.+|+++||||||++||+.+.+.+.+ ++.... +++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 148 qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~ 226 (242)
T PRK11124 148 QRVAIARALMMEPQVLLFDEPTAALDPEITAQIVS-IIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDAS 226 (242)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999888875 455443 48999999999999865 9999999999999999988
Q ss_pred HHH
Q 000452 827 DVI 829 (1495)
Q Consensus 827 ~l~ 829 (1495)
++.
T Consensus 227 ~~~ 229 (242)
T PRK11124 227 CFT 229 (242)
T ss_pred Hhc
Confidence 764
No 471
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-35 Score=307.60 Aligned_cols=200 Identities=23% Similarity=0.333 Sum_probs=168.2
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC------------eEEE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG------------TKAY 685 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g------------~~ay 685 (1495)
+++.+++.+|++ ...+++|+||++++|++++|.|||||||||+|+.|.+++.|++|.|.++| ++|.
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDPSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccChHHHhhhcce
Confidence 678899999963 34589999999999999999999999999999999999999999999998 3567
Q ss_pred EccCCccc-CccHHHHHhcCCC-C------CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHh
Q 000452 686 VAQSPWIQ-SGKIEDNILFGKE-M------DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARAL 757 (1495)
Q Consensus 686 v~Q~~~l~-~~ti~enI~fg~~-~------~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl 757 (1495)
++-+.-++ ..|+||||.|... + -+.+..+..+..++.+-+ .++..++|-||||||+|||||
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~-----------~rRv~~~S~G~kqkV~iARAl 148 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYL-----------DRRVGEFSTGMKQKVAIARAL 148 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHH-----------HHHHhhhchhhHHHHHHHHHH
Confidence 77655555 5699999986422 1 134556666666665544 478899999999999999999
Q ss_pred ccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 758 YQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 758 ~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
.+||++|+||||+|+||..+.+.+ .+.+.... .|++||+.||.++.++. ||+|+++++|+++..|+.+++.+.
T Consensus 149 vh~P~i~vlDEP~sGLDi~~~r~~-~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 149 VHDPSILVLDEPTSGLDIRTRRKF-HDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred hcCCCeEEEcCCCCCccHHHHHHH-HHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 999999999999999999876655 55565554 49999999999999985 999999999999999999888653
No 472
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-35 Score=337.12 Aligned_cols=205 Identities=26% Similarity=0.371 Sum_probs=173.2
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCC-----CCCcEEEEcCe--------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCGT-------- 682 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~-----~~~G~v~~~g~-------- 682 (1495)
..++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|.
T Consensus 19 ~~l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 4699999999995 3579999999999999999999999999999999999986 58999988762
Q ss_pred -------EEEEccCCcccCccHHHHHhcCCC----CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHH
Q 000452 683 -------KAYVAQSPWIQSGKIEDNILFGKE----MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQ 747 (1495)
Q Consensus 683 -------~ayv~Q~~~l~~~ti~enI~fg~~----~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQ 747 (1495)
++|++|++.++..|++||+.++.. .+ +++..++++.+++.++++ +..++.+.+|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHHH
Confidence 689999999988999999987532 12 233455566666643332 23467788999999
Q ss_pred HHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChH
Q 000452 748 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 748 kqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 826 (1495)
|||++||||++++|+++||||||++||+.+...+.+ ++....+++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 247 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEE-TMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTR 247 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999888875 45555567999999999998864 9999999999999999999
Q ss_pred HHHhc
Q 000452 827 DVINS 831 (1495)
Q Consensus 827 ~l~~~ 831 (1495)
++...
T Consensus 248 ~~~~~ 252 (267)
T PRK14237 248 NIFTN 252 (267)
T ss_pred HHhcC
Confidence 88653
No 473
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=2.3e-34 Score=372.36 Aligned_cols=216 Identities=25% Similarity=0.387 Sum_probs=146.1
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHh------cccc----C-----------CccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLF------RIVE----P-----------AAGQ 1305 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~------rl~e----p-----------~~G~ 1305 (1495)
.++++|++. ..|+|+|++|++||.+||+|++|||||||++-.+ ++.+ | -.--
T Consensus 612 ~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (924)
T TIGR00630 612 FLTLKGARE-------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKV 684 (924)
T ss_pred eEEEEeCcc-------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCce
Confidence 588999863 2699999999999999999999999999998333 1111 1 1113
Q ss_pred EEEcCEeCCCC---------C-HHHHhcccEEEcc------cCcCCC--------------CcHHHhcCCC---------
Q 000452 1306 ILIDGIDISLI---------G-LHDLRTRLSIIPQ------DPVMFE--------------GTVRSNVDPL--------- 1346 (1495)
Q Consensus 1306 I~IDG~dI~~i---------~-l~~LR~~isiIpQ------dp~LF~--------------GTIR~NLdp~--------- 1346 (1495)
|.||-.+|..- + .+.+|.-++=.|+ .|-.|+ |.+.-++.+.
T Consensus 685 v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 764 (924)
T TIGR00630 685 IHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEV 764 (924)
T ss_pred EEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCC
Confidence 55655554421 1 1345665655554 233343 1222111110
Q ss_pred ---CCCCH--------------------HHHHHHHHHc-CCcHHHHhc-cCCccc-ccccCCCCCCchHHHHHHHHHHHc
Q 000452 1347 ---EEYTD--------------------EQIWEALDKC-QLGDEVRKK-EGKLDS-KVTENGENWSMGQRQLVCLGRVLL 1400 (1495)
Q Consensus 1347 ---~~~sd--------------------~ei~~aL~~~-~L~~~v~~l-p~gLdt-~v~e~G~nLS~GQrQrl~LARALL 1400 (1495)
..|.+ +|..+..+.. .+.+..+.+ .-||+. ..+.....|||||+||++|||+|.
T Consensus 765 C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~ 844 (924)
T TIGR00630 765 CKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELS 844 (924)
T ss_pred cCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHh
Confidence 01111 1111111110 011111100 025554 357777899999999999999999
Q ss_pred c---CCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhccCEEEEE------eCcEEEEecChhHH
Q 000452 1401 K---RRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVIDSDMVLLL------SHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1401 r---~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~~DrIlVL------~~G~ivE~gsp~~L 1469 (1495)
+ +|+++||||||++||+.+...+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+++
T Consensus 845 ~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 845 KRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIKTADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 7 489999999999999999999999998875 478999999999999999999999 79999999999886
No 474
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-35 Score=370.06 Aligned_cols=212 Identities=21% Similarity=0.307 Sum_probs=182.5
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHH-hccc
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDL-RTRL 1325 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~L-R~~i 1325 (1495)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+.... |+++
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 4899999999964 359999999999999999999999999999999999999999999999999988876554 4679
Q ss_pred EEEcccCcCCCC-cHHHhcCCCC-------CC---C----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHH
Q 000452 1326 SIIPQDPVMFEG-TVRSNVDPLE-------EY---T----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQR 1390 (1495)
Q Consensus 1326 siIpQdp~LF~G-TIR~NLdp~~-------~~---s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQr 1390 (1495)
+|+||+|.+|.+ |+++|+.... .. + ++++.++++.+++.+. +|.++ .+||||||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-------~~~~~----~~LSgG~~ 151 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVD-------LDEKV----ANLSISHK 151 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCC-------cccch----hhCCHHHH
Confidence 999999998876 9999996311 11 1 2346677777777532 23333 47999999
Q ss_pred HHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEEeCcEEEEecChhH
Q 000452 1391 QLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLLSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1391 Qrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL~~G~ivE~gsp~~ 1468 (1495)
||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.+ ||+|++|++|++++.|++++
T Consensus 152 qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (510)
T PRK09700 152 QMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSD 231 (510)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhh
Confidence 99999999999999999999999999999999999998864 47899999999999875 99999999999999999988
Q ss_pred Hhh
Q 000452 1469 LLE 1471 (1495)
Q Consensus 1469 Ll~ 1471 (1495)
+..
T Consensus 232 ~~~ 234 (510)
T PRK09700 232 VSN 234 (510)
T ss_pred CCH
Confidence 754
No 475
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.7e-35 Score=325.42 Aligned_cols=194 Identities=26% Similarity=0.350 Sum_probs=168.5
Q ss_pred EEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccEE
Q 000452 1248 IDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSI 1327 (1495)
Q Consensus 1248 I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~isi 1327 (1495)
|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 789999999964 35999999999999999999999999999999999999999999999999998654 457789999
Q ss_pred EcccCcCCC-CcHHHhcCCCC----CCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccC
Q 000452 1328 IPQDPVMFE-GTVRSNVDPLE----EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKR 1402 (1495)
Q Consensus 1328 IpQdp~LF~-GTIR~NLdp~~----~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~ 1402 (1495)
+||++.++. .|+++|+.... ..+++++.++++..++.+...+. ...||+|||||++||||++++
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~qrl~la~al~~~ 147 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGFEDVP-----------VRQLSAGQQRRVALARLWLTR 147 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHHhhCC-----------hhhcCHHHHHHHHHHHHHhcC
Confidence 999998886 59999996321 13456788899999987554322 357999999999999999999
Q ss_pred CCeEEEEcCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCchhhhc-cCEEEEE
Q 000452 1403 RKILMLDEATASVDTATDNLIQQSLRQHF-SDCTVITIAHRITSVID-SDMVLLL 1455 (1495)
Q Consensus 1403 ~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f-~~~TVI~IAHRl~ti~~-~DrIlVL 1455 (1495)
|+||+|||||++||+++...+.+.|++.. .++|+|+|+|+++.+.. .+|++++
T Consensus 148 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 148 APLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999999998864 47899999999999954 5677766
No 476
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-35 Score=338.00 Aligned_cols=200 Identities=30% Similarity=0.464 Sum_probs=169.7
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------E
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------K 683 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ 683 (1495)
.++++|++++|+. .+++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSG--SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCC--CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 4789999999952 246999999999999999999999999999999999999999999999873 6
Q ss_pred EEEccCCc--ccCccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHH
Q 000452 684 AYVAQSPW--IQSGKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIA 754 (1495)
Q Consensus 684 ayv~Q~~~--l~~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LA 754 (1495)
+|++|+|. +++.|++||+.++.. +++ +++++.++.+++.+.+ ...+..||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qrl~la 149 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELR-----------DRVPHHLSGGEKKRVAIA 149 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHh-----------cCCcccCCHHHHHHHHHH
Confidence 89999973 567899999987532 333 2345666666665433 355679999999999999
Q ss_pred HHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hC-CCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000452 755 RALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LN-SKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 755 RAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
|||+.+|+++||||||++||+.+.+.+.+. +... .+ ++|+|++||+++++. .||++++|++|++++.|+++++.+
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELIDF-LNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 999999999999999999999998887754 4443 33 799999999999986 599999999999999999998864
No 477
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-35 Score=337.03 Aligned_cols=201 Identities=22% Similarity=0.303 Sum_probs=170.2
Q ss_pred cccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------
Q 000452 615 ETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------ 682 (1495)
Q Consensus 615 ~~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------ 682 (1495)
...++++|++++|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 5 ~~~l~i~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (265)
T PRK10253 5 VARLRGEQLTLGYG---KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVAR 81 (265)
T ss_pred ccEEEEEEEEEEEC---CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhh
Confidence 34699999999996 246999999999999999999999999999999999999999999999873
Q ss_pred -EEEEccCCccc-CccHHHHHhcCC-C-------CC---HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHH
Q 000452 683 -KAYVAQSPWIQ-SGKIEDNILFGK-E-------MD---RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQ 749 (1495)
Q Consensus 683 -~ayv~Q~~~l~-~~ti~enI~fg~-~-------~~---~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 749 (1495)
++|++|++.++ +.|++||+.++. + .. +++.+++++..++.+.. ...+.+|||||||
T Consensus 82 ~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~q 150 (265)
T PRK10253 82 RIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLA-----------DQSVDTLSGGQRQ 150 (265)
T ss_pred heEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHh-----------cCCcccCChHHHH
Confidence 68999998776 469999998752 1 11 22445566666665432 3677899999999
Q ss_pred HHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChH
Q 000452 750 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYT 826 (1495)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~ 826 (1495)
|++||||++.+|+++||||||++||+.+.+++.+. +..+ . .++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 151 rv~laral~~~p~llllDEPt~gLD~~~~~~l~~~-L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 229 (265)
T PRK10253 151 RAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLEL-LSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPK 229 (265)
T ss_pred HHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999988764 4443 3 37899999999998765 9999999999999999998
Q ss_pred HHHh
Q 000452 827 DVIN 830 (1495)
Q Consensus 827 ~l~~ 830 (1495)
++..
T Consensus 230 ~~~~ 233 (265)
T PRK10253 230 EIVT 233 (265)
T ss_pred HHhh
Confidence 8754
No 478
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=5.8e-35 Score=336.91 Aligned_cols=206 Identities=25% Similarity=0.381 Sum_probs=168.3
Q ss_pred cEEEEeeEEEecCC------CCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC---------
Q 000452 617 AIEIADGNFSWDIS------SHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------- 681 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~------~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--------- 681 (1495)
.++++|++++|+.. .++++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 47899999999632 135799999999999999999999999999999999999999999999887
Q ss_pred -------eEEEEccCCc--cc-CccHHHHHhcCC----CCCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCcc
Q 000452 682 -------TKAYVAQSPW--IQ-SGKIEDNILFGK----EMDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINL 743 (1495)
Q Consensus 682 -------~~ayv~Q~~~--l~-~~ti~enI~fg~----~~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~L 743 (1495)
.++|++|+|. ++ ..|++||+.++. .++. ++..++++..++..+ ..+.++.+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~----------~~~~~~~~L 151 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSE----------DADKLPRQL 151 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChh----------hhhCChhhC
Confidence 2799999973 33 479999996532 1222 233445555544311 134677899
Q ss_pred chHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-C-CCEEEEEecCCCcccc-CCEEEEEeCCEEE
Q 000452 744 SGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-N-SKTVLYVTHQVEFLPA-ADLVLVIKDGKIT 820 (1495)
Q Consensus 744 SGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~-~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~ 820 (1495)
|||||||++||||++++|+++||||||++||+.+.+.+.+ ++..+. + ++|+|++||+++.+.. ||++++|++|+++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 230 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILE-LLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIV 230 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEE
Confidence 9999999999999999999999999999999999887765 454443 3 8999999999999875 9999999999999
Q ss_pred EecChHHHHhcCC
Q 000452 821 QAGKYTDVINSGT 833 (1495)
Q Consensus 821 ~~g~~~~l~~~~~ 833 (1495)
+.|+.+++.....
T Consensus 231 ~~g~~~~~~~~~~ 243 (265)
T TIGR02769 231 EECDVAQLLSFKH 243 (265)
T ss_pred EECCHHHHcCCCC
Confidence 9999999876433
No 479
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.8e-35 Score=328.38 Aligned_cols=188 Identities=35% Similarity=0.505 Sum_probs=155.8
Q ss_pred EEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------EEE
Q 000452 619 EIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KAY 685 (1495)
Q Consensus 619 ~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~ay 685 (1495)
+++|++++|+.. .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 367899999531 257999999999999999999999999999999999999999999999873 589
Q ss_pred EccCCc--ccCccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHH
Q 000452 686 VAQSPW--IQSGKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARA 756 (1495)
Q Consensus 686 v~Q~~~--l~~~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 756 (1495)
++|++. +++.|++||+.++.. .+ +++.++.++..++.+.+ .++..+||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLR-----------DRSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhh-----------cCCcccCCHHHHHHHHHHHH
Confidence 999983 567899999987532 22 22344555655554333 35678999999999999999
Q ss_pred hccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCE
Q 000452 757 LYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGK 818 (1495)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~ 818 (1495)
++.+|+++||||||++||+.+.+.+.+.+.....+++|+|++||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999988876443323348999999999999876 99999999985
No 480
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-35 Score=334.06 Aligned_cols=204 Identities=27% Similarity=0.404 Sum_probs=169.8
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCC-----CcEEEEcC----------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKI-----SGTLKLCG---------- 681 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~-----~G~v~~~g---------- 681 (1495)
.++++|+++.|+ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|
T Consensus 4 ~l~~~~l~~~~~---~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYH---KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEEC---CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 589999999995 256999999999999999999999999999999999999987 69998865
Q ss_pred -----eEEEEccCCcccCccHHHHHhcCCCC----CH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 682 -----TKAYVAQSPWIQSGKIEDNILFGKEM----DR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 682 -----~~ayv~Q~~~l~~~ti~enI~fg~~~----~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
.++|++|++.+++.|++||+.++..+ .+ ++.+++++..++.+.++ ...++.+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCHHHH
Confidence 26899999999888999999886421 11 22333344444432221 234678899999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 827 (1495)
||++||||++.+|+++||||||++||+.+...+.+ ++....+++|+|++||+++.+.. ||++++|++|++.+.|+.++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEE-LMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGE 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHH
Confidence 99999999999999999999999999999888765 55555568999999999999876 89999999999999999988
Q ss_pred HHhc
Q 000452 828 VINS 831 (1495)
Q Consensus 828 l~~~ 831 (1495)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14249 233 IFSR 236 (251)
T ss_pred HHhC
Confidence 7643
No 481
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3.8e-35 Score=343.92 Aligned_cols=200 Identities=23% Similarity=0.417 Sum_probs=170.6
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------EE
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KA 684 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------~a 684 (1495)
.++++|++++|+ ++.+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++
T Consensus 2 ~l~~~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~~~~~~~~~ig 78 (301)
T TIGR03522 2 SIRVSSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQNPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccChHHHHhceE
Confidence 378999999995 356999999999999999999999999999999999999999999999883 69
Q ss_pred EEccCCcccCc-cHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHH
Q 000452 685 YVAQSPWIQSG-KIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARA 756 (1495)
Q Consensus 685 yv~Q~~~l~~~-ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARA 756 (1495)
|+||++.++.. |++||+.+... .+ .++.+++++..++.+. .+++..+||||||||++||||
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrv~la~a 147 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPE-----------QHKKIGQLSKGYRQRVGLAQA 147 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchH-----------hcCchhhCCHHHHHHHHHHHH
Confidence 99999998865 99999975321 12 2344555555555432 346778999999999999999
Q ss_pred hccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 757 LYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 757 l~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
++++|++++|||||++||+.+.+.+++ .+....+++|+|++||+++.+.. ||+|++|++|++...|+.+++...
T Consensus 148 l~~~p~lliLDEPt~gLD~~~~~~l~~-~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 148 LIHDPKVLILDEPTTGLDPNQLVEIRN-VIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 999999999999999999999888876 45555568999999999998876 999999999999999999998653
No 482
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=4.7e-35 Score=317.44 Aligned_cols=166 Identities=32% Similarity=0.593 Sum_probs=150.2
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------EEE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KAY 685 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------~ay 685 (1495)
++++|++++|+.. .+++++|+||++++||+++|+||||||||||+++|+|+.+|++|+|.++|. ++|
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEE
Confidence 4689999999632 247999999999999999999999999999999999999999999999884 689
Q ss_pred EccCCcccCccHHHHHhcCCCCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeE
Q 000452 686 VAQSPWIQSGKIEDNILFGKEMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYL 765 (1495)
Q Consensus 686 v~Q~~~l~~~ti~enI~fg~~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~ill 765 (1495)
++|++++++.|++||+ +.+||||||||++||||++.+|+++|
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 46899999999999999999999999
Q ss_pred ecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccccCCEEEEEeCCEEEEec
Q 000452 766 FDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAG 823 (1495)
Q Consensus 766 LDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~~d~i~~l~~G~i~~~g 823 (1495)
|||||++||+.+.+.+++. +....+++|+|++||++++++.||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~-l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSL-IFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHH-HHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999998888754 44445689999999999998889999999999998754
No 483
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-35 Score=334.80 Aligned_cols=204 Identities=28% Similarity=0.423 Sum_probs=169.7
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCC-----CCCcEEEEcCe---------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCGT--------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~-----~~~G~v~~~g~--------- 682 (1495)
.++++|++++|+ .+++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYG---NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEEC---CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 589999999995 2579999999999999999999999999999999999987 47999998773
Q ss_pred ------EEEEccCCcccCccHHHHHhcCCCC----CH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 683 ------KAYVAQSPWIQSGKIEDNILFGKEM----DR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 683 ------~ayv~Q~~~l~~~ti~enI~fg~~~----~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
++|++|++.+++.|++||+.++... ++ ++..++++.+++..+. ....++.+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhhCCHHHH
Confidence 5899999999989999999875321 11 2344455555553211 1123467889999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 827 (1495)
||++||||++++|+++||||||++||+.+.+.+.+ ++....+++|+|++||+++++.. ||+|++|++|++++.|+.++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEE-TLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEE 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHH-HHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999888765 45555567899999999999765 99999999999999999988
Q ss_pred HHhc
Q 000452 828 VINS 831 (1495)
Q Consensus 828 l~~~ 831 (1495)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14251 233 MFIA 236 (251)
T ss_pred HHhC
Confidence 7643
No 484
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-35 Score=376.46 Aligned_cols=220 Identities=23% Similarity=0.316 Sum_probs=181.5
Q ss_pred eEEEeeeeEEeCCC--CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCC----------
Q 000452 1247 KIDLRDLQVRYAPH--MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDIS---------- 1314 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~--~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~---------- 1314 (1495)
.|+++|++++|+.. ..++|+||||+|++||++||||+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 69999999999632 236999999999999999999999999999999999999999999999998652
Q ss_pred CCCH---HHHh-cccEEEcccC--cCCCC-cHHHhcCCC----CCCC----HHHHHHHHHHcCCcHHHHhccCCcccccc
Q 000452 1315 LIGL---HDLR-TRLSIIPQDP--VMFEG-TVRSNVDPL----EEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVT 1379 (1495)
Q Consensus 1315 ~i~l---~~LR-~~isiIpQdp--~LF~G-TIR~NLdp~----~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~ 1379 (1495)
+.+. ..+| ++|++|+|+| .++.. ||++|+... ...+ ++++.++|+.+++.+.- .-++
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----~~~~---- 163 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEAQ----TILS---- 163 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChh----hHHh----
Confidence 2222 2344 5799999999 57764 999998521 1122 24577788888875310 0112
Q ss_pred cCCCCCCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCchhhhc-cCEEEEEe
Q 000452 1380 ENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFS--DCTVITIAHRITSVID-SDMVLLLS 1456 (1495)
Q Consensus 1380 e~G~nLS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~--~~TVI~IAHRl~ti~~-~DrIlVL~ 1456 (1495)
....+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||||++|+
T Consensus 164 ~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 164 RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 22357999999999999999999999999999999999999999999998752 7899999999999865 99999999
Q ss_pred CcEEEEecChhHHhhcCC
Q 000452 1457 HGLIEEYDSPRKLLENKS 1474 (1495)
Q Consensus 1457 ~G~ivE~gsp~~Ll~~~~ 1474 (1495)
+|+|++.|+++++++.+.
T Consensus 244 ~G~i~~~g~~~~~~~~~~ 261 (623)
T PRK10261 244 QGEAVETGSVEQIFHAPQ 261 (623)
T ss_pred CCeecccCCHHHhhcCCC
Confidence 999999999999986543
No 485
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.9e-35 Score=345.32 Aligned_cols=186 Identities=23% Similarity=0.349 Sum_probs=159.7
Q ss_pred CCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe------------EEEEccCCcccC-ccHHH
Q 000452 633 NPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT------------KAYVAQSPWIQS-GKIED 699 (1495)
Q Consensus 633 ~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~------------~ayv~Q~~~l~~-~ti~e 699 (1495)
+++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|+||++.++. .|++|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e 85 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGRE 85 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHH
Confidence 57999999999999999999999999999999999999999999999883 699999998875 49999
Q ss_pred HHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEeEecCcCCc
Q 000452 700 NILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSA 772 (1495)
Q Consensus 700 nI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~illLDep~sa 772 (1495)
|+.+... .+ +++.+++++.++|.+.. ..+..+||||||||++||||++++|+++||||||++
T Consensus 86 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 86 NLEMMGRLYGLPKDEAEERAEELLELFELGEAA-----------DRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-----------CCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9986421 11 23455666666665433 356789999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000452 773 VDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 773 LD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
||+.+.+.+++. +... .+|+|+|++||+++.+.. ||+|++|++|+++..|+++++.+
T Consensus 155 LD~~~~~~l~~~-l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 155 LDPRTRRAIWDY-IRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKR 213 (302)
T ss_pred CCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHH
Confidence 999998888764 4444 358999999999999875 99999999999999999998764
No 486
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-35 Score=333.34 Aligned_cols=203 Identities=28% Similarity=0.399 Sum_probs=169.5
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCC-----CCcEEEEcC----------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCG---------- 681 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~-----~~G~v~~~g---------- 681 (1495)
.++++|+++.|+ ++++++|+||++++||+++|+||||||||||+++|+|..++ ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 3 KISVKDLDLFYG---DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred eEEEEEEEEEEC---CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 488999999996 24799999999999999999999999999999999998763 699999886
Q ss_pred -----eEEEEccCCcccCccHHHHHhcCCCC----C----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 682 -----TKAYVAQSPWIQSGKIEDNILFGKEM----D----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 682 -----~~ayv~Q~~~l~~~ti~enI~fg~~~----~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
.++|++|++.+++.|++||+.++... + +++..+.++.+++.+++. ...++.+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHHH
Confidence 25899999998889999999886321 1 223344455555543332 124567889999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 827 (1495)
||++||||++.+|+++||||||++||+.+.+.+.+ ++....+++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEE-LIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999888764 55555568899999999998765 99999999999999999888
Q ss_pred HHh
Q 000452 828 VIN 830 (1495)
Q Consensus 828 l~~ 830 (1495)
+..
T Consensus 232 ~~~ 234 (250)
T PRK14240 232 LFT 234 (250)
T ss_pred HHh
Confidence 754
No 487
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=5.9e-35 Score=334.66 Aligned_cols=199 Identities=31% Similarity=0.421 Sum_probs=166.8
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC----------------
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG---------------- 681 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g---------------- 681 (1495)
|+++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 i~~~~l~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFG---ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeC---CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 46899999995 25799999999999999999999999999999999999999999999876
Q ss_pred ----------eEEEEccCCcccC-ccHHHHHhcCCC----CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCc
Q 000452 682 ----------TKAYVAQSPWIQS-GKIEDNILFGKE----MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGIN 742 (1495)
Q Consensus 682 ----------~~ayv~Q~~~l~~-~ti~enI~fg~~----~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~ 742 (1495)
.++|++|++.++. .|++||+.++.. .+. ++..+.++..++.+. .++.+.+
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADK-----------ADHMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhH-----------hhcChhh
Confidence 2689999998874 799999987521 222 234445555555432 3466789
Q ss_pred cchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hC-CCEEEEEecCCCccc-cCCEEEEEeCCEE
Q 000452 743 LSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LN-SKTVLYVTHQVEFLP-AADLVLVIKDGKI 819 (1495)
Q Consensus 743 LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvIlvTH~~~~l~-~~d~i~~l~~G~i 819 (1495)
||||||||++||||++++|+++||||||++||+.+...+++ ++... .+ ++|+|++||+++.+. .||++++|++|++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i 225 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLN-VIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRI 225 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999888875 44443 33 899999999999986 4999999999999
Q ss_pred EEecChHHHHhc
Q 000452 820 TQAGKYTDVINS 831 (1495)
Q Consensus 820 ~~~g~~~~l~~~ 831 (1495)
++.|+++++.+.
T Consensus 226 ~~~g~~~~~~~~ 237 (252)
T TIGR03005 226 VEQGKPDEIFRQ 237 (252)
T ss_pred EEeCCHHHHhcC
Confidence 999999888643
No 488
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.2e-34 Score=321.98 Aligned_cols=191 Identities=20% Similarity=0.324 Sum_probs=148.5
Q ss_pred eEEEeeeeEEeCCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccCCccEEEEcCEeCCCCCHHHHhcccE
Q 000452 1247 KIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLS 1326 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~is 1326 (1495)
.+-+.||+|.|+... |.+++++|-|.--.+|+||||+|-|||||+++|.|-++|+.|+..=+ -|-+||
T Consensus 586 vLGlH~VtFgy~gqk-pLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P~~GE~RKn-----------hrL~iG 653 (807)
T KOG0066|consen 586 VLGLHDVTFGYPGQK-PLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDPNDGELRKN-----------HRLRIG 653 (807)
T ss_pred eeecccccccCCCCC-chhhcccccccccceeEEECCCCccHHHHHHHHhcCCCCCcchhhcc-----------ceeeee
Confidence 467899999997654 58999999999999999999999999999999999999999986533 355788
Q ss_pred EEcccCc--C-CCCcHHHhcCCCCCCCHHHHHHHHHHcCCcHHHHhccCCcccccccCCCCCCchHHHHHHHHHHHccCC
Q 000452 1327 IIPQDPV--M-FEGTVRSNVDPLEEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRR 1403 (1495)
Q Consensus 1327 iIpQdp~--L-F~GTIR~NLdp~~~~sd~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~nLS~GQrQrl~LARALLr~~ 1403 (1495)
..-|..- | -+.|--+.|.-.-..+-++-..+|...||...-... .-..||||||-|++||-.-|+.|
T Consensus 654 ~FdQh~~E~L~~Eetp~EyLqr~FNlpyq~ARK~LG~fGL~sHAHTi----------kikdLSGGQKaRValaeLal~~P 723 (807)
T KOG0066|consen 654 WFDQHANEALNGEETPVEYLQRKFNLPYQEARKQLGTFGLASHAHTI----------KIKDLSGGQKARVALAELALGGP 723 (807)
T ss_pred chhhhhHHhhccccCHHHHHHHhcCCChHHHHHHhhhhhhhhccceE----------eeeecCCcchHHHHHHHHhcCCC
Confidence 8888752 1 223544544322234456677777777765332111 12469999999999999999999
Q ss_pred CeEEEEcCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCchhhhc--cCEEEEEeCcEEEE
Q 000452 1404 KILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVID--SDMVLLLSHGLIEE 1462 (1495)
Q Consensus 1404 ~ILiLDEaTsslD~~Td~~Iq~~Ir~~f~~~TVI~IAHRl~ti~~--~DrIlVL~~G~ivE 1462 (1495)
+||||||||.+||.++-..+-++|+++ +..||+|+|+-..|.. |. .+|+++-.|-|
T Consensus 724 DvlILDEPTNNLDIESIDALaEAIney--~GgVi~VsHDeRLi~eT~C~-LwVvE~Q~i~e 781 (807)
T KOG0066|consen 724 DVLILDEPTNNLDIESIDALAEAINEY--NGGVIMVSHDERLIVETDCN-LWVVENQGIDE 781 (807)
T ss_pred CEEEecCCCCCcchhhHHHHHHHHHhc--cCcEEEEecccceeeecCce-EEEEccCChhh
Confidence 999999999999999999999999987 5689999999888764 54 45555544444
No 489
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-35 Score=338.64 Aligned_cols=199 Identities=33% Similarity=0.491 Sum_probs=168.2
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------------- 682 (1495)
++++|++++|+. .+++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 689999999952 346999999999999999999999999999999999999999999999872
Q ss_pred EEEEccCC--cccCccHHHHHhcCCC---CCH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 KAYVAQSP--WIQSGKIEDNILFGKE---MDR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 ~ayv~Q~~--~l~~~ti~enI~fg~~---~~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
++|++|+| .+++.|++||+.++.. ... ++..++++.++|.... ...+.+||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFE-----------NKPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhh-----------cCChhhCCHHHHHHHHH
Confidence 58999997 5678899999987531 221 3345556666654221 35577999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHh
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
|||++.+|+++||||||++||+.+...+.+. +..+. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKL-LYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999998888754 44443 58999999999999874 99999999999999999998764
No 490
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=7.8e-35 Score=328.75 Aligned_cols=195 Identities=30% Similarity=0.448 Sum_probs=156.8
Q ss_pred EEEEeeEEEecCCC-CCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcC---------------
Q 000452 618 IEIADGNFSWDISS-HNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG--------------- 681 (1495)
Q Consensus 618 i~~~~~~~~~~~~~-~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g--------------- 681 (1495)
++++|++++|+... ..++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 68899999995311 12699999999999999999999999999999999999999999999876
Q ss_pred -eEEEEccCCc--cc-CccHHHHHhcCCC-----CCHHHHH----HHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 682 -TKAYVAQSPW--IQ-SGKIEDNILFGKE-----MDRERYN----AVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 682 -~~ayv~Q~~~--l~-~~ti~enI~fg~~-----~~~~~~~----~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
.++|++|++. ++ ..|++||+.++.. .+++..+ +.++..++.. ...++++.+||||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~ 151 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPE----------EVLNRYPHELSGGQR 151 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCCh----------hHhhCCchhcCHHHH
Confidence 2689999983 33 5799999976421 1111111 2333333321 234567789999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hC-CCEEEEEecCCCccc-cCCEEEEEeCCEEEEec
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LN-SKTVLYVTHQVEFLP-AADLVLVIKDGKITQAG 823 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~-~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g 823 (1495)
||++||||++.+|+++||||||++||+.+.+.+.+. +... .+ ++|+|++||+++.+. .||++++|++|++++.|
T Consensus 152 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 152 QRVAIARALALNPKLLIADEPTSALDVSVQAQILDL-LKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999998888754 4444 33 899999999999987 49999999999998654
No 491
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-35 Score=333.53 Aligned_cols=204 Identities=26% Similarity=0.403 Sum_probs=172.1
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCC-----CCcEEEEcCe---------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCGT--------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~-----~~G~v~~~g~--------- 682 (1495)
.++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~---~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYG---EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEEC---CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 588999999995 25799999999999999999999999999999999999875 7999998762
Q ss_pred ------EEEEccCCcccCccHHHHHhcCCCC----CH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 683 ------KAYVAQSPWIQSGKIEDNILFGKEM----DR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 683 ------~ayv~Q~~~l~~~ti~enI~fg~~~----~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
++|++|++.++..|++||+.|+... +. +++.++++.+++.++++ ...+.+..+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVK-------DDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHHH
Confidence 6899999999989999999876321 11 23455666666643332 123567889999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 827 (1495)
||++||||++.+|+++||||||++||+.+..++.+ ++....+++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~-~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 232 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIED-LMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEK 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHH
Confidence 99999999999999999999999999999888865 55555557999999999998765 99999999999999999998
Q ss_pred HHhc
Q 000452 828 VINS 831 (1495)
Q Consensus 828 l~~~ 831 (1495)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14270 233 IFLE 236 (251)
T ss_pred HhcC
Confidence 8654
No 492
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=9.9e-35 Score=334.64 Aligned_cols=197 Identities=26% Similarity=0.435 Sum_probs=166.0
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCC---CcEEEEcCe-----------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKI---SGTLKLCGT----------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~---~G~v~~~g~----------- 682 (1495)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.
T Consensus 4 ~l~~~nl~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFN---QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeC---CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 589999999995 357999999999999999999999999999999999999886 499998872
Q ss_pred -------EEEEccCCcccC-ccHHHHHhcCCC------------CC---HHHHHHHHHHhCcHHHHhhcCCCCcccccCC
Q 000452 683 -------KAYVAQSPWIQS-GKIEDNILFGKE------------MD---RERYNAVLDACSLEKDLEILSFGDQTVVGER 739 (1495)
Q Consensus 683 -------~ayv~Q~~~l~~-~ti~enI~fg~~------------~~---~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~ 739 (1495)
++|++|++.++. .|++||+.++.. .. +++.+++++..++.+. ....
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHF-----------AHQR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHH-----------HhCC
Confidence 589999998776 599999987631 01 2234555555555432 2457
Q ss_pred CCccchHHHHHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh--CCCEEEEEecCCCccc-cCCEEEEEeC
Q 000452 740 GINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL--NSKTVLYVTHQVEFLP-AADLVLVIKD 816 (1495)
Q Consensus 740 g~~LSGGQkqRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~--~~~tvIlvTH~~~~l~-~~d~i~~l~~ 816 (1495)
+.+||||||||++||||++.+|+++||||||++||+++.+.+.+. +.... +|+|+|++||+++.+. .||++++|++
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~ 228 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDT-LRDINQNDGITVVVTLHQVDYALRYCERIVALRQ 228 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 789999999999999999999999999999999999998888754 54443 3799999999999875 4999999999
Q ss_pred CEEEEecChHHH
Q 000452 817 GKITQAGKYTDV 828 (1495)
Q Consensus 817 G~i~~~g~~~~l 828 (1495)
|++.+.|+++++
T Consensus 229 g~i~~~g~~~~~ 240 (262)
T PRK09984 229 GHVFYDGSSQQF 240 (262)
T ss_pred CEEEEeCCHHHh
Confidence 999999999886
No 493
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=6.8e-35 Score=328.01 Aligned_cols=195 Identities=23% Similarity=0.330 Sum_probs=166.9
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe---------EEEEcc
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT---------KAYVAQ 688 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~---------~ayv~Q 688 (1495)
++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|++|
T Consensus 1 l~l~~v~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~~~~~~~~~q 77 (223)
T TIGR03740 1 LETKNLSKRFG---KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKDLHKIGSLIE 77 (223)
T ss_pred CEEEeEEEEEC---CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccccccEEEEcC
Confidence 46899999995 357999999999999999999999999999999999999999999999873 689999
Q ss_pred CCcccC-ccHHHHHhcCC---CCCHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCCCEe
Q 000452 689 SPWIQS-GKIEDNILFGK---EMDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDADIY 764 (1495)
Q Consensus 689 ~~~l~~-~ti~enI~fg~---~~~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~~il 764 (1495)
++.++. .|++||+.++. ..++++..+.++..++++.. .....+||||||||++||||++.+|+++
T Consensus 78 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~~rv~laral~~~p~ll 146 (223)
T TIGR03740 78 SPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTG-----------KKKAKQFSLGMKQRLGIAIALLNHPKLL 146 (223)
T ss_pred CCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHH-----------hhhHhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 988765 69999997642 23456667777777776433 3456799999999999999999999999
Q ss_pred EecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHH
Q 000452 765 LFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 765 lLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 827 (1495)
||||||++||+.+.+.+.+ ++... .+++|+|++||+++++.. ||++++|++|++.+.|+.++
T Consensus 147 llDEP~~~LD~~~~~~l~~-~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 147 ILDEPTNGLDPIGIQELRE-LIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred EECCCccCCCHHHHHHHHH-HHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999888865 44444 358899999999999865 99999999999999988654
No 494
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=7.1e-35 Score=334.69 Aligned_cols=198 Identities=25% Similarity=0.383 Sum_probs=166.5
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-------------EE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-------------KA 684 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-------------~a 684 (1495)
++++|+++.|+ ++++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|. ++
T Consensus 2 l~~~~l~~~~~---~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAG---GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEEC---CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 67899999995 357999999999999999999999999999999999999999999999872 68
Q ss_pred EEccCCc-ccCccHHHHHhcCCC-C----------CHHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHH
Q 000452 685 YVAQSPW-IQSGKIEDNILFGKE-M----------DRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQ 752 (1495)
Q Consensus 685 yv~Q~~~-l~~~ti~enI~fg~~-~----------~~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~ 752 (1495)
|++|++. .+..|++||+.++.. . +.++..++++.+++.+. ..+.+.+||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHL-----------ADRDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhh-----------hcCCcccCCHHHHHHHH
Confidence 9999985 456799999987631 1 11234455555555432 24567899999999999
Q ss_pred HHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHHHHh
Q 000452 753 IARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLL-NSKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTDVIN 830 (1495)
Q Consensus 753 LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~-~~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~l~~ 830 (1495)
||||++.+|+++||||||++||+.....+.+ ++.... +++|+|++||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLA-LVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999888865 454443 4789999999999986 499999999999999999988754
No 495
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-35 Score=333.28 Aligned_cols=193 Identities=33% Similarity=0.486 Sum_probs=162.8
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe--------EEEEccC
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------KAYVAQS 689 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------~ayv~Q~ 689 (1495)
++++|+++.|+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|++|+
T Consensus 2 l~~~~l~~~~~---~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~v~q~ 78 (255)
T PRK11248 2 LQISHLYADYG---GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGPGAERGVVFQN 78 (255)
T ss_pred EEEEEEEEEeC---CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCCcEEEEeCC
Confidence 68899999995 257999999999999999999999999999999999999999999999873 6899999
Q ss_pred CcccC-ccHHHHHhcCCC---CC----HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhccCC
Q 000452 690 PWIQS-GKIEDNILFGKE---MD----RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALYQDA 761 (1495)
Q Consensus 690 ~~l~~-~ti~enI~fg~~---~~----~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~~~~ 761 (1495)
+.++. .|++||+.++.. .+ .++..++++.+++.+.. ..++.+||||||||++||||++.+|
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGq~qrl~laral~~~p 147 (255)
T PRK11248 79 EGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAE-----------KRYIWQLSGGQRQRVGIARALAANP 147 (255)
T ss_pred CccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHh-----------hCChhhCCHHHHHHHHHHHHHhcCC
Confidence 98775 699999987531 22 23445566666664332 3567899999999999999999999
Q ss_pred CEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCcccc-CCEEEEEe--CCEEEEecCh
Q 000452 762 DIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPA-ADLVLVIK--DGKITQAGKY 825 (1495)
Q Consensus 762 ~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~-~d~i~~l~--~G~i~~~g~~ 825 (1495)
+++||||||++||+.+.+.+.+. +... . .|+|+|++||+++++.. ||++++|+ +|++++.++.
T Consensus 148 ~lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 148 QLLLLDEPFGALDAFTREQMQTL-LLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred CEEEEeCCCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999998888754 4443 3 48999999999999865 99999998 5999987654
No 496
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.2e-34 Score=366.13 Aligned_cols=220 Identities=22% Similarity=0.378 Sum_probs=183.1
Q ss_pred eEEEeeeeEEeCCC--CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccccC-----CccEEEEcCEeCCCCCHH
Q 000452 1247 KIDLRDLQVRYAPH--MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEP-----AAGQILIDGIDISLIGLH 1319 (1495)
Q Consensus 1247 ~I~f~nv~~~Y~~~--~~~vL~~Is~~I~~GekvgIVGrTGSGKSTLl~~L~rl~ep-----~~G~I~IDG~dI~~i~l~ 1319 (1495)
.|+++|++++|+.+ ..++|+||||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 58999999999642 24699999999999999999999999999999999999987 799999999999887654
Q ss_pred H---Hh-cccEEEcccCc--CCC-CcHHHhcCC----CCCCC----HHHHHHHHHHcCCcHHHHhccCCcccccccCCCC
Q 000452 1320 D---LR-TRLSIIPQDPV--MFE-GTVRSNVDP----LEEYT----DEQIWEALDKCQLGDEVRKKEGKLDSKVTENGEN 1384 (1495)
Q Consensus 1320 ~---LR-~~isiIpQdp~--LF~-GTIR~NLdp----~~~~s----d~ei~~aL~~~~L~~~v~~lp~gLdt~v~e~G~n 1384 (1495)
+ .| ++++|+||+|. ++. -|+++|+.. ....+ ++++.++++.+++.+.... +|. ...+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~----~~~----~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKR----LTD----YPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH----Hhh----CCcc
Confidence 3 34 57999999985 444 489998741 11122 3457788998888642111 122 2347
Q ss_pred CCchHHHHHHHHHHHccCCCeEEEEcCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCchhhhc-cCEEEEEeCcEEE
Q 000452 1385 WSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHF--SDCTVITIAHRITSVID-SDMVLLLSHGLIE 1461 (1495)
Q Consensus 1385 LS~GQrQrl~LARALLr~~~ILiLDEaTsslD~~Td~~Iq~~Ir~~f--~~~TVI~IAHRl~ti~~-~DrIlVL~~G~iv 1461 (1495)
||||||||++|||||+.+|++|+||||||+||+.+...+.+.|++.. .+.|||+|+|+++.+.. ||||++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998864 37899999999998875 9999999999999
Q ss_pred EecChhHHhhcCC
Q 000452 1462 EYDSPRKLLENKS 1474 (1495)
Q Consensus 1462 E~gsp~~Ll~~~~ 1474 (1495)
+.|+++++++.+.
T Consensus 237 ~~g~~~~~~~~~~ 249 (529)
T PRK15134 237 EQNRAATLFSAPT 249 (529)
T ss_pred EeCCHHHHhhCCC
Confidence 9999999986543
No 497
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-35 Score=332.73 Aligned_cols=204 Identities=29% Similarity=0.389 Sum_probs=168.3
Q ss_pred cEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCC-----CCcEEEEcCe---------
Q 000452 617 AIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPK-----ISGTLKLCGT--------- 682 (1495)
Q Consensus 617 ~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~-----~~G~v~~~g~--------- 682 (1495)
.++++|++++|+ ++++|+|+||++++||+++|+||||||||||+++|+|+++| ++|+|.++|.
T Consensus 3 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFG---QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEEC---CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 488999999995 24799999999999999999999999999999999999974 7999999873
Q ss_pred ----EEEEccCCcc-cCccHHHHHhcCCCC-----CH----HHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHH
Q 000452 683 ----KAYVAQSPWI-QSGKIEDNILFGKEM-----DR----ERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQK 748 (1495)
Q Consensus 683 ----~ayv~Q~~~l-~~~ti~enI~fg~~~-----~~----~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQk 748 (1495)
++|++|++.+ ++.|++||+.++... .. ++..+.++.+++.+.++ ......+.+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK-------DRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCCcccCCHHHH
Confidence 6899999875 467999999875321 11 23344555555532111 123466789999999
Q ss_pred HHHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCccc-cCCEEEEEeCCEEEEecChHH
Q 000452 749 QRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLP-AADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 749 qRv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 827 (1495)
||++||||++++|+++||||||++||+.+.+.+.+. +....+++|+|++||+++.+. .||++++|++|++.+.|+.++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESL-FLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTRE 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHH
Confidence 999999999999999999999999999998888754 444456899999999999986 499999999999999999988
Q ss_pred HHhc
Q 000452 828 VINS 831 (1495)
Q Consensus 828 l~~~ 831 (1495)
+.+.
T Consensus 232 ~~~~ 235 (250)
T PRK14247 232 VFTN 235 (250)
T ss_pred HHcC
Confidence 7643
No 498
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=334.10 Aligned_cols=205 Identities=25% Similarity=0.393 Sum_probs=172.3
Q ss_pred ccEEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCC-----CCCcEEEEcC---------
Q 000452 616 TAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVP-----KISGTLKLCG--------- 681 (1495)
Q Consensus 616 ~~i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~-----~~~G~v~~~g--------- 681 (1495)
..++++|++++|+ ++++|+|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 9 ~~l~i~~v~~~~~---~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 85 (264)
T PRK14243 9 TVLRTENLNVYYG---SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVD 85 (264)
T ss_pred eEEEEeeeEEEEC---CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccC
Confidence 3689999999995 2479999999999999999999999999999999999976 4799999877
Q ss_pred ------eEEEEccCCcccCccHHHHHhcCCCC---C---HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHH
Q 000452 682 ------TKAYVAQSPWIQSGKIEDNILFGKEM---D---RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQ 749 (1495)
Q Consensus 682 ------~~ayv~Q~~~l~~~ti~enI~fg~~~---~---~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkq 749 (1495)
.++|++|++.+++.|++||+.++... . +++..++++.+++..++.. ..++.+.+|||||||
T Consensus 86 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~q 158 (264)
T PRK14243 86 PVEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQ 158 (264)
T ss_pred hHHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHH
Confidence 26899999998888999999876421 1 2334455666666544421 235678899999999
Q ss_pred HHHHHHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHHhCCCEEEEEecCCCcccc-CCEEEEEe---------CCEE
Q 000452 750 RIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPA-ADLVLVIK---------DGKI 819 (1495)
Q Consensus 750 Rv~LARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~~~~~tvIlvTH~~~~l~~-~d~i~~l~---------~G~i 819 (1495)
|++||||++.+|+++||||||++||+.+.+.+.+ ++....+++|+|++||+++.+.. ||++++|+ +|++
T Consensus 159 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i 237 (264)
T PRK14243 159 RLCIARAIAVQPEVILMDEPCSALDPISTLRIEE-LMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYL 237 (264)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceE
Confidence 9999999999999999999999999999888765 55555557899999999999865 99999998 8999
Q ss_pred EEecChHHHHhc
Q 000452 820 TQAGKYTDVINS 831 (1495)
Q Consensus 820 ~~~g~~~~l~~~ 831 (1495)
++.|+.+++.+.
T Consensus 238 ~~~~~~~~~~~~ 249 (264)
T PRK14243 238 VEFDRTEKIFNS 249 (264)
T ss_pred EEeCCHHHHHhC
Confidence 999999998653
No 499
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=325.72 Aligned_cols=197 Identities=31% Similarity=0.475 Sum_probs=166.6
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe-----------EEEE
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT-----------KAYV 686 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~-----------~ayv 686 (1495)
++++|++++|+. .+ .|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 2 l~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 76 (232)
T PRK10771 2 LKLTDITWLYHH---LP--MRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPVSML 76 (232)
T ss_pred eEEEEEEEEECC---cc--ceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccEEEE
Confidence 689999999952 22 3999999999999999999999999999999999999999999873 6899
Q ss_pred ccCCcccC-ccHHHHHhcCCC----CC---HHHHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHHHHHhc
Q 000452 687 AQSPWIQS-GKIEDNILFGKE----MD---RERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQIARALY 758 (1495)
Q Consensus 687 ~Q~~~l~~-~ti~enI~fg~~----~~---~~~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~LARAl~ 758 (1495)
+|++.++. .|++||+.++.. .. +++..++++..++++.++ .....||||||||++||||++
T Consensus 77 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~laral~ 145 (232)
T PRK10771 77 FQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLA-----------RLPGQLSGGQRQRVALARCLV 145 (232)
T ss_pred ecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHh-----------CCcccCCHHHHHHHHHHHHHh
Confidence 99998876 499999987531 11 234556677777655443 556789999999999999999
Q ss_pred cCCCEeEecCcCCccCHHHHHHHHHHHHHHH-h-CCCEEEEEecCCCcccc-CCEEEEEeCCEEEEecChHHHHhc
Q 000452 759 QDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-L-NSKTVLYVTHQVEFLPA-ADLVLVIKDGKITQAGKYTDVINS 831 (1495)
Q Consensus 759 ~~~~illLDep~saLD~~~~~~i~~~~~~~~-~-~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~~~g~~~~l~~~ 831 (1495)
.+|+++||||||++||+.+.+.+.+. +... . .++|+|++||+++.+.. ||++++|++|++.+.|+++++.+.
T Consensus 146 ~~p~lllLDEP~~gLD~~~~~~~~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 146 REQPILLLDEPFSALDPALRQEMLTL-VSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999998888754 4443 3 37899999999999875 999999999999999999888653
No 500
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.2e-34 Score=325.86 Aligned_cols=189 Identities=24% Similarity=0.353 Sum_probs=158.4
Q ss_pred EEEEeeEEEecCCCCCCccccceEEeeCCcEEEEEecCCccHHHHHHHHhCCCCCCCcEEEEcCe---------------
Q 000452 618 IEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCGT--------------- 682 (1495)
Q Consensus 618 i~~~~~~~~~~~~~~~~~L~~i~l~i~~G~~~~i~G~~GsGKSTLl~~llG~~~~~~G~v~~~g~--------------- 682 (1495)
++++|+++.|+. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 688999999942 357999999999999999999999999999999999999999999998873
Q ss_pred -EEEEccCCcc-cCccHHHHHhcCCC---CCHH----HHHHHHHHhCcHHHHhhcCCCCcccccCCCCccchHHHHHHHH
Q 000452 683 -KAYVAQSPWI-QSGKIEDNILFGKE---MDRE----RYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQKQRIQI 753 (1495)
Q Consensus 683 -~ayv~Q~~~l-~~~ti~enI~fg~~---~~~~----~~~~vl~~~~l~~dl~~l~~gd~t~ig~~g~~LSGGQkqRv~L 753 (1495)
++|++|+|.+ ++.|++||+.++.. .+.+ +.++.++..++.+++ .....+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKA-----------KNFPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCCchhCCHHHHHHHHH
Confidence 5899999986 56799999987531 2221 234455555554333 35668999999999999
Q ss_pred HHHhccCCCEeEecCcCCccCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCcccc-CCEEEEEeCCEEE
Q 000452 754 ARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGL-LNSKTVLYVTHQVEFLPA-ADLVLVIKDGKIT 820 (1495)
Q Consensus 754 ARAl~~~~~illLDep~saLD~~~~~~i~~~~~~~~-~~~~tvIlvTH~~~~l~~-~d~i~~l~~G~i~ 820 (1495)
|||++.+|+++||||||++||+.+.+.+.+ ++... .+++|+|++||+++++.. ||++++|++|+++
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILR-LFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEc
Confidence 999999999999999999999999888875 44444 357899999999999876 9999999999986
Done!