Query 000452
Match_columns 1495
No_of_seqs 502 out of 5621
Neff 7.4
Searched_HMMs 29240
Date Tue Mar 26 17:53:14 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000452.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_230-233//hhsearch_pdb/000452hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1688.3 116.1 1236 242-1484 1-1316(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1358.0 107.8 1177 297-1487 44-1273(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 785.5 63.6 516 967-1485 136-654 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 747.5 50.0 515 967-1484 108-625 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 714.3 55.8 565 914-1486 26-592 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 713.2 61.0 570 909-1485 7-579 (587)
7 4a82_A Cystic fibrosis transme 1.0 1 1 692.2 56.8 563 914-1482 3-574 (578)
8 3b60_A Lipid A export ATP-bind 1.0 1 1 689.0 66.7 562 914-1484 14-579 (582)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 687.3 69.9 563 913-1484 13-579 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 680.7 65.8 567 915-1486 9-585 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1688.32 Aligned_cols=1236 Identities=19% Similarity=0.239 Sum_probs=937.7
Q ss_pred HHHCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-----------CCCCCHHHHHHHHHHH-HHHHHHHHHH
Q ss_conf 998004-68888889989999995678999999988863135-----------9998705899999999-7999999999
Q 000452 242 LIALGN-KKTLDLEDVPQLDSGNSVVGVFATFKNKLETEAGL-----------GSGLTTLKLIKAMFRS-VWKDVLLTAL 308 (1495)
Q Consensus 242 l~~~g~-~~~L~~~Dl~~l~~~~~~~~~~~~f~~~~~~~~~~-----------~~~~~~~~l~~~l~~~-~~~~~~~~~~ 308 (1495)
+++-|. +++|+..|.+.+.|+|..+...+.+++.|.....+ .+..++.+ ++.+++. -+++.++.++
T Consensus 1 ~~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~Lfrya~~~d~~l~~~ 79 (1321)
T 4f4c_A 1 MLRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVS-IPQLYRYTTTLEKLLLFI 79 (1321)
T ss_dssp ---CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCC-HHHHTTTCCHHHHHHHHH
T ss_pred CCCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC-HHHHHHCCCHHHHHHHHH
T ss_conf 9877310068763544567950111000011345424355433431001223202568779-999731567678999999
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHC-------CC--------CCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999---999999998508-------98--------862-----368999999999999999999999999
Q 000452 309 VAIVCTLATYVGP---YLIDTLVQYLSG-------KR--------DFE-----NEGYALVSAFCVAKLVECLCQRFFVFR 365 (1495)
Q Consensus 309 ~~l~~~~~~~~~P---~ll~~li~~~~~-------~~--------~~~-----~~g~~l~~~l~~~~~i~~~~~~~~~~~ 365 (1495)
..++..+...+.| +++..+++.+.+ .. ... .....++..++...+...++.....+.
T Consensus 80 g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~ 159 (1321)
T 4f4c_A 80 GTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTC 159 (1321)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999701000145430003443100168999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999985699100058998999999999999999999-9935899999999999999999987999
Q 000452 366 LEQLGIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELS-WYIHDPWLFLFEVALSFLILYKSLGIAS 444 (1495)
Q Consensus 366 ~~~~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~iinl~s~D~~~i~~~~-~~~~~~~~~plqi~~~~~lL~~~lg~~~ 444 (1495)
....+.|+...++..+|+|.++++...++++++|+++|++++|+++++++. ..+..++..++.++.++++++..-...+
T Consensus 160 ~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~l~ 239 (1321)
T 4f4c_A 160 YLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQLT 239 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999788989987998489999999999999999999999999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999993279999835189999999999999999999999998
Q 000452 445 VAAFFGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGWLKRCLYTS 524 (1495)
Q Consensus 445 l~gl~~~~i~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~l~~~~~~~ 524 (1495)
++.++++++..++...+.+...++.++.++..+++.+.+.|.++|||+||.|+||+.+.+++.+..++..+...+.....
T Consensus 240 lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (1321)
T 4f4c_A 240 LVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFL 319 (1321)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998399999821429999999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 89999999998--9999999999998348757778999999999999999999999999999999999999974488899
Q 000452 525 SITSFVFWCAP--TFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIASFFCLDELQ 602 (1495)
Q Consensus 525 ~~~~~~~~~~p--~~v~~~tf~~~~~~~~~L~~~~vft~la~f~~l~~pl~~lp~~i~~~~~a~vS~~RI~~fL~~~e~~ 602 (1495)
+.......... ..+.++.++.+.+.++.+++|.+++++.++..+..|+..++..+..+.++.+|++||.+|++.++..
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~ 399 (1321)
T 4f4c_A 320 GISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPVI 399 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999999999999999999959986999999999999999999989999999999999999999997178534
Q ss_pred CCCCC-CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 64234-79999986408998338983599999941131178628809999813786399999998379879875899849
Q 000452 603 PDLVE-KQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKISGTLKLCG 681 (1495)
Q Consensus 603 ~~~~~-~~~~~~~~~~I~i~~~~fsw~~~~~~~~L~~inl~i~~G~~vaIvG~~GSGKStLl~~ilGe~~~~~G~i~i~g 681 (1495)
++... ..+.....+.|+|+|++|+|+..++.++|+|+||++++|+++||||++|||||||+++|+|+|++.+|+|.++|
T Consensus 400 ~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~~~~~~G~I~idG 479 (1321)
T 4f4c_A 400 DSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRYYDVLKGKITIDG 479 (1321)
T ss_dssp SCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTSSCCSEEEEEETT
T ss_pred CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 56665565677888767999855407999987433331886228827899805898577888875456516448615799
Q ss_pred -------------EEEEECCCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf -------------4799926775667558899721998-99999999999819288886347898640147988666479
Q 000452 682 -------------TKAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGERGINLSGGQ 747 (1495)
Q Consensus 682 -------------~~ayv~Q~pwi~~gTIreNIlfG~~-~d~~~y~~vi~ac~L~~Dl~~lp~Gd~T~IGe~G~nLSGGQ 747 (1495)
.++||+|+||||++||||||+||+| .+++++.++++.|++++|++.||+||+|+|||+|.+|||||
T Consensus 480 ~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~vGe~G~~LSGGQ 559 (1321)
T 4f4c_A 480 VDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTLVGDRGTQLSGGQ 559 (1321)
T ss_dssp EETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSEESSSSCCCCHHH
T ss_pred CCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCHHH
T ss_conf 65011259998504666587533207861678864155220999999998756546887088888607558988777778
Q ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCHHH
Q ss_conf 99999999860399786742867766988899999999988758977999805777423587899992997999048678
Q 000452 748 KQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKITQAGKYTD 827 (1495)
Q Consensus 748 KqRIaLARAly~~adI~LLDDp~SalD~~t~~~if~~~i~~~l~~kTvIlvTH~~~~l~~aD~Iivl~~G~I~~~G~~~~ 827 (1495)
||||+||||+|+||+||||||||||||++++ +++++++.+++++||+|+|||++++++.||+|++|++|+|+++|+|+|
T Consensus 560 kQRiaiARAl~~~~~IliLDE~tSaLD~~te-~~i~~~l~~~~~~~T~iiiaHrls~i~~aD~Iivl~~G~ive~Gth~e 638 (1321)
T 4f4c_A 560 KQRIAIARALVRNPKILLLDEATSALDAESE-GIVQQALDKAAKGRTTIIIAHRLSTIRNADLIISCKNGQVVEVGDHRA 638 (1321)
T ss_dssp HHHHHHHHHHTTCCSEEEEESTTTTSCTTTH-HHHHHHHHHHHTTSEEEEECSCTTTTTTCSEEEEEETTEEEEEECHHH
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHH-HHHHHHHHHHHCCCEEEEECCCHHHHHHCCEEEEEECCEEECCCCHHH
T ss_conf 7999999987259998998455446887899-999999999847988999736387898689899963996513689999
Q ss_pred HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC---CCCC----CCCCCCCCCCCCC--------CCCCCCCCC
Q ss_conf 971298216789987742101455668887777988998---9998----7655533221100--------011332333
Q 000452 828 VINSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGE---NDGT----SATDGVVKEVENK--------EVQNDREDK 892 (1495)
Q Consensus 828 L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~~~~--------~~~~~~~~~ 892 (1495)
|++.++.|.+++..+..........+... ..+.+...+ .... ....+........ .....++..
T Consensus 639 L~~~~g~y~~l~~~q~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 717 (1321)
T 4f4c_A 639 LMAQQGLYYDLVTAQTFTDAVDSAAEGKF-SRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSITNGPVIDEKEER 717 (1321)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHHHHHCC---------------------------------------------------CC
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHH
T ss_conf 99853279999996221222233233443-32232111222223422222221102211101321245677402577753
Q ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCCHHHHH
Q ss_conf 34324455689998616750899999999830136899999999999999985699999532567787--8776503789
Q 000452 893 VAEPQRQLVQEEEREKGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDI--KPRVTGSMLL 970 (1495)
Q Consensus 893 ~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~l~~~~~~~~~~wl~~~~~~~~~~--~~~~~~~~~l 970 (1495)
..........++.++.|...+..|+.|......+....+.+++.++.........+|+..|....... .......+|.
T Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1321)
T 4f4c_A 718 IGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPADFLSQGHFWA 797 (1321)
T ss_dssp CCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSSTTTTTHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 15403899999999707863109999999877899999999999999999999999999999875179345566789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCHHHHHCCHHHHHHHHHHHHHHH
Q ss_conf 99999987999999999999999999999999999999880387630213--4655204587342569873557999999
Q 000452 971 IVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDA--TPSGRIINRASTDQSAVDLSIPALIGSF 1048 (1495)
Q Consensus 971 ~~y~~l~~~~~~~~~~r~~~~~~~~~~~s~~l~~~ll~~il~ap~~ffd~--tp~GrilnR~s~D~~~id~~i~~~l~~~ 1048 (1495)
.+|++++++..++.+++.+++...+.++++++|.+++++++++|++|||+ +|+|+++||+++|+..+|..++..+..+
T Consensus 798 ~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~ 877 (1321)
T 4f4c_A 798 LMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTV 877 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999988873499333216788848888502505999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHH
Q ss_conf 99999999999999998799999999999999999999999999999999884105799999841113888761428999
Q 000452 1049 AFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRF 1128 (1495)
Q Consensus 1049 ~~~~~~~l~~i~v~~~~~~~~~~i~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~~f 1128 (1495)
+..++.+++.++++++.+|++.+++++++++.++...++.+..+...+......++...++.|+++|+.|||+|++|++|
T Consensus 878 ~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~ 957 (1321)
T 4f4c_A 878 ITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTF 957 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHH
T ss_pred HHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99865377770221378689999999988899999999999999999999999888988999999627988861414889
Q ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999740159999999999999999999999999999999-843--89778999999999999999999999999
Q 000452 1129 IDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVFLI-SIP--KGFIDPAIAGLAVTYGLTLNNLQAMLIWL 1205 (1495)
Q Consensus 1129 ~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~~i-~~~--~~~~~~~~~glalsy~l~l~~~~~~~i~~ 1205 (1495)
.+++.+..+.+.+..+.......+.......+..+..+.+..+.. .+. ...+.++.+...+.+.......+.++...
T Consensus 958 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 1037 (1321)
T 4f4c_A 958 YENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSY 1037 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999875788753765421478999999998778899999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCC-CCCEEEEEEEEECCCEEEEECCC
Q ss_conf 99999986699999987419999998665589999999962189741067858999-94100016885089399999699
Q 000452 1206 ACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHM-PFVLRGISCTFPGEKKTGIVGRT 1284 (1495)
Q Consensus 1206 ~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nv~~~Y~~~~-~~vL~~is~~i~~GekigIVGrT 1284 (1495)
+.++++.+.+++|+.++.+.++|.+ +...+++.||..|.|+|+||+|+|+.+. .+||+|+||+|+|||+|||||||
T Consensus 1038 ~~~~~~~~~a~~ri~~~l~~~~~~~---~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~S 1114 (1321)
T 4f4c_A 1038 FPEYAKATFAGGIIFGMLRKISKID---SLSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPS 1114 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCSSC---TTCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEEECST
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCC
T ss_conf 9999999999998999860766577---7667787888888189998798579999882124516998898999998999
Q ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCC---CCCCHHHHHHHHHHC
Q ss_conf 98988999998335669863799969738999977772243898156767877577704999---899999999999983
Q 000452 1285 GSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL---EEYTDEQIWEALDKC 1361 (1495)
Q Consensus 1285 GSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~---~~~sD~eI~~aL~~~ 1361 (1495)
|||||||+++|+|+|+|++|+|.|||+||+++++++||+++++|||||+||+||||+||..+ .+++|+|||+|+++|
T Consensus 1115 GsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a 1194 (1321)
T 4f4c_A 1115 GCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLA 1194 (1321)
T ss_dssp TSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 98199999999568638997899999986549999998545998789973272399997454999999999999999982
Q ss_pred CCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 99678971008865212269998890399999999987259986998758889999989999999998569927998705
Q 000452 1362 QLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAH 1441 (1495)
Q Consensus 1362 ~L~~~i~~lp~gLdt~v~e~G~nlS~GQrQll~LARALLk~~~ILiLDEaTsslD~~Te~~Iq~~Ir~~f~~~TvI~IAH 1441 (1495)
+++++|.++|+||||.|+|+|.|||||||||+|||||+||+|+||+||||||+||++||+.||++|++.+++||+|+|||
T Consensus 1195 ~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~~~~TvI~IAH 1274 (1321)
T 4f4c_A 1195 NIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCIVIAH 1274 (1321)
T ss_dssp TCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTSSSSEEEEECS
T ss_pred CCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 98499971767899982388915699999999999999717998999681115789999999999999739998999606
Q ss_pred CCHHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 9022301398999938489985492478612997689999999
Q 000452 1442 RITSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEY 1484 (1495)
Q Consensus 1442 Rl~ti~~~DrIlVLd~G~IvE~g~p~~Ll~~~~s~f~~lv~~~ 1484 (1495)
|++||++||+|+|||+|+|+|+|+|++|+++ +|.|++|+++.
T Consensus 1275 RLsTi~~aD~I~Vld~G~IvE~Gth~eLl~~-~g~y~~L~~~Q 1316 (1321)
T 4f4c_A 1275 RLNTVMNADCIAVVSNGTIIEKGTHTQLMSE-KGAYYKLTQKQ 1316 (1321)
T ss_dssp SSSTTTTCSEEEEESSSSEEEEECHHHHHHC-C----------
T ss_pred CHHHHHHCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHH
T ss_conf 8999996999999989899998888999849-80999999999
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1358.04 Aligned_cols=1177 Identities=18% Similarity=0.212 Sum_probs=867.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------C------------CCHHHHHHHHHHHHHHHHHHH
Q ss_conf 997999999999999999999999999999999850898-------8------------623689999999999999999
Q 000452 297 RSVWKDVLLTALVAIVCTLATYVGPYLIDTLVQYLSGKR-------D------------FENEGYALVSAFCVAKLVECL 357 (1495)
Q Consensus 297 ~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~-------~------------~~~~g~~l~~~l~~~~~i~~~ 357 (1495)
+..|..+++..++.++..++..+.|+++..+++...... . .......++..++...++..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (1284)
T 3g5u_A 44 WLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLI 123 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57999999999999999999999999999999998613444332222221111100244688999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999856991000589989999999999999999999-9358999999999999999
Q 000452 358 CQRFFVFRLEQLGIRLRAALIAMIYNKGLKLSSQAKQGNTSGEIINFMTVDAERVAELSW-YIHDPWLFLFEVALSFLIL 436 (1495)
Q Consensus 358 ~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~ls~~~~~~~~~G~iinl~s~D~~~i~~~~~-~~~~~~~~plqi~~~~~lL 436 (1495)
+.....+...+.+.++...++..+|+|.++++...++++++|+++|+++.|++.+.+... .+..+....+.++.++.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~ 203 (1284)
T 3g5u_A 124 VAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIG 203 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999998699899756887789999998899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99987999999999999999999999999999999999999999999999932799998351899999999999999999
Q 000452 437 YKSLGIASVAAFFGTVIFMLVNVPLSTVQEKFQNELMKSKDERMKATSEILRNMRILKLQGWELKFLSKTIDLRKSESGW 516 (1495)
Q Consensus 437 ~~~lg~~~l~gl~~~~i~~~~~~~~~~~~~~~~~~~m~~~D~R~~~~~E~L~~ik~IK~~~wE~~f~~~i~~~R~~E~~~ 516 (1495)
+..-...+++.++.++++..+..++.+...+..++.++..++......|.++||++||.|++|+.+.++..+..++-.+.
T Consensus 204 ~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~~ 283 (1284)
T 3g5u_A 204 FTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRL 283 (1284)
T ss_dssp HHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 99989999999999999999999999999999999999999999999999978799998465399999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999998899999999--9899999999999983487577789999999999999999999999999999999999999
Q 000452 517 LKRCLYTSSITSFVFWC--APTFVSVITFGTCILLKVPLESGKVLSAIATFRLLQILIYKLPAIISMTIQTKVSLQRIAS 594 (1495)
Q Consensus 517 l~~~~~~~~~~~~~~~~--~p~~v~~~tf~~~~~~~~~L~~~~vft~la~f~~l~~pl~~lp~~i~~~~~a~vS~~RI~~ 594 (1495)
..+.....+....+... ....+.++.++.+.+..+.+++|.+++++.++.....|+..+...+..+.++..+..|+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~ 363 (1284)
T 3g5u_A 284 GIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFK 363 (1284)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999299889999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCC-CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHCCCCCC
Q ss_conf 7448889964-234799999864089983389835999999411311786288099998137863999999983798798
Q 000452 595 FFCLDELQPD-LVEKQPRGSSETAIEIADGNFSWDISSHNPTLKDINLKVFHGMRVAVCGTVGSGKSSLLSCILGEVPKI 673 (1495)
Q Consensus 595 fL~~~e~~~~-~~~~~~~~~~~~~I~i~~~~fsw~~~~~~~~L~~inl~i~~G~~vaIvG~~GSGKStLl~~ilGe~~~~ 673 (1495)
+++.++..++ .....+.....+.|+++|++|+|+...+.++|+|+||++++|++++|+|++|||||||+++|+|++++.
T Consensus 364 ~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsGKSTl~~ll~g~~~~~ 443 (1284)
T 3g5u_A 364 IIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPL 443 (1284)
T ss_dssp TTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSSHHHHHHHTTTSSCCS
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 97289867766656777777777189999899769999871012545897599889998999997999999980788999
Q ss_pred CCEEEECCE-------------EEEECCCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
Q ss_conf 758998494-------------799926775667558899721998-999999999998192888863478986401479
Q 000452 674 SGTLKLCGT-------------KAYVAQSPWIQSGKIEDNILFGKE-MDRERYNAVLDACSLEKDLEILSFGDQTVVGER 739 (1495)
Q Consensus 674 ~G~i~i~g~-------------~ayv~Q~pwi~~gTIreNIlfG~~-~d~~~y~~vi~ac~L~~Dl~~lp~Gd~T~IGe~ 739 (1495)
+|+|.++|. ++||+|+||++++||+|||.||.+ .++++++++++.|++.++++.+|+|++|.+||+
T Consensus 444 ~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~ 523 (1284)
T 3g5u_A 444 DGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQFDTLVGER 523 (1284)
T ss_dssp EEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHHHSTTGGGCCCSSS
T ss_pred CEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC
T ss_conf 73899999987757999998654898688753776699997457989999999999998296999974656334501478
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCEE
Q ss_conf 88666479999999998603997867428677669888999999999887589779998057774235878999929979
Q 000452 740 GINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLNSKTVLYVTHQVEFLPAADLVLVIKDGKI 819 (1495)
Q Consensus 740 G~nLSGGQKqRIaLARAly~~adI~LLDDp~SalD~~t~~~if~~~i~~~l~~kTvIlvTH~~~~l~~aD~Iivl~~G~I 819 (1495)
|.+|||||||||+||||+|++|+|+||||||||||+++++.+ ++++....+++|+|+|||+++.+..||+|++|++|+|
T Consensus 524 g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i-~~~l~~~~~~~t~i~itH~l~~i~~~d~i~vl~~G~i 602 (1284)
T 3g5u_A 524 GAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVV-QAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVI 602 (1284)
T ss_dssp SCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHH-HHHHHHHHTTSEEEEECSCHHHHTTCSEEEECSSSCC
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH-HHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEE
T ss_conf 786599999999999999529998999798777799999999-9999997399989999407789974998999989999
Q ss_pred EEECCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 99048678971298216789987742101455668887777988998999876555332211000113323333432445
Q 000452 820 TQAGKYTDVINSGTDFMELVDAHKQALSTLDSIEGRPLSEKGSANGENDGTSATDGVVKEVENKEVQNDREDKVAEPQRQ 899 (1495)
Q Consensus 820 ~~~G~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (1495)
++.|+|+++++.++.|.+++..+..........+.....++........ .......... ..... ...........
T Consensus 603 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~--~~~~~~~~~~~ 677 (1284)
T 3g5u_A 603 VEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSS-KDSGSSLIRR--RSTRK--SICGPHDQDRK 677 (1284)
T ss_dssp CCEECHHHHHHTTSHHHHHHHHTC--------------------------------------------------------
T ss_pred EEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC--CCCCC--CCCCCCCCCCC
T ss_conf 9978899998678779999997430022111333333222223443333-3333200034--54333--44564223321
Q ss_pred HHHHHHHH--HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----CCCHHHHHHHH
Q ss_conf 56899986--1675089999999983013689999999999999998569999953256778787----76503789999
Q 000452 900 LVQEEERE--KGKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKP----RVTGSMLLIVF 973 (1495)
Q Consensus 900 ~~~~e~~~--~g~v~~~~y~~y~~~~~~~~~~~~~~~~~~l~~~~~~~~~~wl~~~~~~~~~~~~----~~~~~~~l~~y 973 (1495)
...+|+.+ .....+..++.|.+....... +.+++.++.........+++..+.+......+ ......+..+|
T Consensus 678 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 755 (1284)
T 3g5u_A 678 LSTKEALDEDVPPASFWRILKLNSTEWPYFV--VGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLF 755 (1284)
T ss_dssp ------CCCCCSCCCTTHHHHHHHHTCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHCCCCCHHHHHHHHHHCCHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
T ss_conf 1024555313662589999998451579999--99999999999999999999999999855685033677999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9998799999999999999999999999999999988038763021--34655204587342569873557999999999
Q 000452 974 VALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFD--ATPSGRIINRASTDQSAVDLSIPALIGSFAFS 1051 (1495)
Q Consensus 974 ~~l~~~~~~~~~~r~~~~~~~~~~~s~~l~~~ll~~il~ap~~ffd--~tp~GrilnR~s~D~~~id~~i~~~l~~~~~~ 1051 (1495)
+++++...++.+.+.+++...+.+...++|.+++++++++|++||| .+|+|+++||+++|+..++..++..+..++..
T Consensus 756 ~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~ 835 (1284)
T 3g5u_A 756 LILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQN 835 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999998399888757899889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHH
Q ss_conf 99999999999998799999999999999999999999999999999884105799999841113888761428999999
Q 000452 1052 IIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDT 1131 (1495)
Q Consensus 1052 ~~~~l~~i~v~~~~~~~~~~i~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~~f~~~ 1131 (1495)
++.+++.+++++.++|.+.++++..+++.+.+..++.+..+...+......+....++.|++.|+.+||+|+.|++|.++
T Consensus 836 ~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~ 915 (1284)
T 3g5u_A 836 IANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETM 915 (1284)
T ss_dssp HHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 99999999999999699999999999999999999999999999999999999999999999889999984659999999
Q ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH-HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999740159999999999999999999999---99999999-98438977899999999999999999999999999
Q 000452 1132 NMELMDGYSRPTFHVAAAMEWLGFRLDMLSNIT---FAFSLVFL-ISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLAC 1207 (1495)
Q Consensus 1132 ~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~---~~~~~~~~-i~~~~~~~~~~~~glalsy~l~l~~~~~~~i~~~~ 1207 (1495)
+.+..+...+....... |.+....+...+. .+.+..+. ..+..+.++.+.+...+.+.......+..+.....
T Consensus 916 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 992 (1284)
T 3g5u_A 916 YAQSLQIPYRNAMKKAH---VFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAP 992 (1284)
T ss_dssp HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999---999999999999999999999999999990980699999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCCCC
Q ss_conf 99998669999998741999999866558999999996218974106785899-99410001688508939999969998
Q 000452 1208 QMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPH-MPFVLRGISCTFPGEKKTGIVGRTGS 1286 (1495)
Q Consensus 1208 ~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nv~~~Y~~~-~~~vL~~is~~i~~GekigIVGrTGS 1286 (1495)
++.....+++|+.++.+.+++.+... ..+...++..|.|+|+||+++|+.. ..++|+|+||+|++||++||||+|||
T Consensus 993 ~~~~~~~a~~ri~~~l~~~~~~~~~~--~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGs 1070 (1284)
T 3g5u_A 993 DYAKATVSASHIIRIIEKTPEIDSYS--TQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGC 1070 (1284)
T ss_dssp CSTHHHHHHHHHHHHHHSCCSSSSCC--SSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSST
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCCC
T ss_conf 99999999999999983887666655--5665456777857999989977999987002030599769988999889999
Q ss_pred CHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCC---CCCCHHHHHHHHHHCCC
Q ss_conf 988999998335669863799969738999977772243898156767877577704999---89999999999998399
Q 000452 1287 GKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL---EEYTDEQIWEALDKCQL 1363 (1495)
Q Consensus 1287 GKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~---~~~sD~eI~~aL~~~~L 1363 (1495)
|||||+++|+|+++|++|+|.+||.|+++++++++|+++++|||||.+|++|||+|+.+. ...++++++++++++++
T Consensus 1071 GKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~ 1150 (1284)
T 3g5u_A 1071 GKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANI 1150 (1284)
T ss_dssp THHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCC
T ss_conf 78999999946867899779899998000789999702689877874066669999746687789999999999998395
Q ss_pred CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 67897100886521226999889039999999998725998699875888999998999999999856992799870590
Q 000452 1364 GDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRI 1443 (1495)
Q Consensus 1364 ~~~i~~lp~gLdt~v~e~G~nlS~GQrQll~LARALLk~~~ILiLDEaTsslD~~Te~~Iq~~Ir~~f~~~TvI~IAHRl 1443 (1495)
.+++.++|+||||.++|+|.+||||||||+||||||+++|+||+||||||++|.+|++.|++.|++..+++|+|+||||+
T Consensus 1151 ~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi~isH~l 1230 (1284)
T 3g5u_A 1151 HQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRL 1230 (1284)
T ss_dssp HHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEEEECSCT
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCH
T ss_conf 99997270424561178889338999999999999974999999868755579999999999999867999899995587
Q ss_pred HHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHHHC
Q ss_conf 22301398999938489985492478612997689999999612
Q 000452 1444 TSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYTQR 1487 (1495)
Q Consensus 1444 ~ti~~~DrIlVLd~G~IvE~g~p~~Ll~~~~s~f~~lv~~~~~~ 1487 (1495)
+++.+||||+||++|+|+|+|+|++|+++ ++.|++|++.....
T Consensus 1231 ~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~g~y~~l~~~q~~~ 1273 (1284)
T 3g5u_A 1231 STIQNADLIVVIQNGKVKEHGTHQQLLAQ-KGIYFSMVSVQAGA 1273 (1284)
T ss_dssp TGGGSCSEEEEEETBEEEEEECHHHHHHS-CSHHHHHHHHHC--
T ss_pred HHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHHHHC
T ss_conf 99980998999989989997789999847-77799999997613
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=785.48 Aligned_cols=516 Identities=19% Similarity=0.237 Sum_probs=460.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHH
Q ss_conf 37899999998799999999999999999999999999999988038763021346552045873425698735579999
Q 000452 967 SMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIG 1046 (1495)
Q Consensus 967 ~~~l~~y~~l~~~~~~~~~~r~~~~~~~~~~~s~~l~~~ll~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~ 1046 (1495)
..++..|++++++..++.+++.+++.+.+.+...+++.++++++++.|++|||++++|++++|+++|++.++..+...+.
T Consensus 136 ~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~ 215 (1321)
T 4f4c_A 136 MNVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIG 215 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999788989987998489999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHH
Q ss_conf 99999999999999999987999999999999999999999999999999998841057999998411138887614289
Q 000452 1047 SFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQES 1126 (1495)
Q Consensus 1047 ~~~~~~~~~l~~i~v~~~~~~~~~~i~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~ 1126 (1495)
.++..++.+++.++++++.+|.+.++.+..+++..++..++.+..+...+......+...+++.|+++|+++||+|++|+
T Consensus 216 ~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~ 295 (1321)
T 4f4c_A 216 MAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLR 295 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999998399999821429
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999997401599999999999999999999999999999-9984389778999999999999999999999999
Q 000452 1127 RFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWL 1205 (1495)
Q Consensus 1127 ~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~-~i~~~~~~~~~~~~glalsy~l~l~~~~~~~i~~ 1205 (1495)
++.+++.+..+...+..........+......++..+.++.+.++ ...+..|.+++|.+...+.|...+..++..+...
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~ 375 (1321)
T 4f4c_A 296 YELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQ 375 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999959986999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCC
Q ss_conf 9999998669999998741999999866558999999996218974106785899-994100016885089399999699
Q 000452 1206 ACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPH-MPFVLRGISCTFPGEKKTGIVGRT 1284 (1495)
Q Consensus 1206 ~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nv~~~Y~~~-~~~vL~~is~~i~~GekigIVGrT 1284 (1495)
+..+.....+.+|+.++++.+++.+.. ....+...+..|+|+|+||+|+|+.. ..++|+|+||+|++||++||||+|
T Consensus 376 ~~~~~~~~~s~~ri~~~l~~~~~~~~~--~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~s 453 (1321)
T 4f4c_A 376 LAVLGTAQGAASGIYEVLDRKPVIDSS--SKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSS 453 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCCSSCS--SSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCC--CCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECC
T ss_conf 999999999999999997178534566--655656778887679998554079999874333318862288278998058
Q ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCC
Q ss_conf 989889999983356698637999697389999777722438981567678775777049998-9999999999998399
Q 000452 1285 GSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQL 1363 (1495)
Q Consensus 1285 GSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~-~~sD~eI~~aL~~~~L 1363 (1495)
|||||||+++|+|+|+|++|+|.|||+|++++++++||+++++|||||+||+||||+||..+. +++|+++++|++.|++
T Consensus 454 GsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l 533 (1321)
T 4f4c_A 454 GCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANA 533 (1321)
T ss_dssp SSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf 98577888875456516448615799650112599985046665875332078616788641552209999999987565
Q ss_pred CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 67897100886521226999889039999999998725998699875888999998999999999856992799870590
Q 000452 1364 GDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRI 1443 (1495)
Q Consensus 1364 ~~~i~~lp~gLdt~v~e~G~nlS~GQrQll~LARALLk~~~ILiLDEaTsslD~~Te~~Iq~~Ir~~f~~~TvI~IAHRl 1443 (1495)
+++++.+|+|+||.|||+|.|||||||||+|||||++++|+||+||||||++|++||+.|+++|++..+++|+|+||||+
T Consensus 534 ~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrl 613 (1321)
T 4f4c_A 534 EKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRL 613 (1321)
T ss_dssp HHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCT
T ss_pred HHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCH
T ss_conf 46887088888607558988777778799999998725999899845544688789999999999984798899973638
Q ss_pred HHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHHH
Q ss_conf 223013989999384899854924786129976899999996
Q 000452 1444 TSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEYT 1485 (1495)
Q Consensus 1444 ~ti~~~DrIlVLd~G~IvE~g~p~~Ll~~~~s~f~~lv~~~~ 1485 (1495)
+|+.+||+|+||++|+|+|+|+|++|+++ ++.|++|++...
T Consensus 614 s~i~~aD~Iivl~~G~ive~Gth~eL~~~-~g~y~~l~~~q~ 654 (1321)
T 4f4c_A 614 STIRNADLIISCKNGQVVEVGDHRALMAQ-QGLYYDLVTAQT 654 (1321)
T ss_dssp TTTTTCSEEEEEETTEEEEEECHHHHHTT-TCHHHHHHHHHH
T ss_pred HHHHHCCEEEEEECCEEECCCCHHHHHHH-HHHHHHHHHHHH
T ss_conf 78986898999639965136899999985-327999999622
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=747.46 Aligned_cols=515 Identities=19% Similarity=0.250 Sum_probs=446.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHH
Q ss_conf 37899999998799999999999999999999999999999988038763021346552045873425698735579999
Q 000452 967 SMLLIVFVALAFGSSFCILARSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIG 1046 (1495)
Q Consensus 967 ~~~l~~y~~l~~~~~~~~~~r~~~~~~~~~~~s~~l~~~ll~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~ 1046 (1495)
..+..+|++++++..++.+++.++....+.+...++|.+++++++++|++|||++++|+++||+++|++.++..++..+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~ 187 (1284)
T 3g5u_A 108 TTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIG 187 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999869989975688778999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHH
Q ss_conf 99999999999999999987999999999999999999999999999999998841057999998411138887614289
Q 000452 1047 SFAFSIIRVLGVIGVMSLVAWQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQES 1126 (1495)
Q Consensus 1047 ~~~~~~~~~l~~i~v~~~~~~~~~~i~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~ 1126 (1495)
.++..++.+++.++++++.+|.+.+++++.+++++++..++.+..+...+......++..+++.|+++|+.|||+|++|+
T Consensus 188 ~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~ 267 (1284)
T 3g5u_A 188 MFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQK 267 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999997879999846539
Q ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999997401599999999999999999999999999999-9984389778999999999999999999999999
Q 000452 1127 RFIDTNMELMDGYSRPTFHVAAAMEWLGFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWL 1205 (1495)
Q Consensus 1127 ~f~~~~~~~~d~~~~~~~~~~~~~~wl~~rl~~l~~~~~~~~~~~-~i~~~~~~~~~~~~glalsy~l~l~~~~~~~i~~ 1205 (1495)
++.+++.+..+.+.+..........+......++..+..+.+.++ ...+..+.+++|.+..++.+.+.....+..+...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~ 347 (1284)
T 3g5u_A 268 KELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPN 347 (1284)
T ss_dssp SHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999929988999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCC
Q ss_conf 9999998669999998741999999866558999999996218974106785899-994100016885089399999699
Q 000452 1206 ACQMENKIISVERIFQYTCIPSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPH-MPFVLRGISCTFPGEKKTGIVGRT 1284 (1495)
Q Consensus 1206 ~~~le~~~~sveRi~~~~~~~~E~~~~~~~~~~~~~wp~~g~I~~~nv~~~Y~~~-~~~vL~~is~~i~~GekigIVGrT 1284 (1495)
+..++....+++|+.++.+.++|.+...+...++ .+..|.|+|+||+|+|+.+ .+++|+|+||+|++||++||||+|
T Consensus 348 ~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~--~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~s 425 (1284)
T 3g5u_A 348 IEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKP--DNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNS 425 (1284)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCC--TTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC--CCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCC
T ss_conf 9999999999999999972898677666567777--77777189999899769999871012545897599889998999
Q ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCC-CCCCHHHHHHHHHHCCC
Q ss_conf 98988999998335669863799969738999977772243898156767877577704999-89999999999998399
Q 000452 1285 GSGKSTLIQTLFRIVEPAAGQILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQL 1363 (1495)
Q Consensus 1285 GSGKSTLl~~L~rl~ep~~G~I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~-~~~sD~eI~~aL~~~~L 1363 (1495)
|||||||+++|+|+++|++|+|.+||.|+++++++++|+++++|||||.+|+||||+|+.+. .++++++++++++.+++
T Consensus 426 GsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~ 505 (1284)
T 3g5u_A 426 GCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANA 505 (1284)
T ss_dssp SSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCC
T ss_conf 99799999998078899973899999987757999998654898688753776699997457989999999999998296
Q ss_pred CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 67897100886521226999889039999999998725998699875888999998999999999856992799870590
Q 000452 1364 GDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRI 1443 (1495)
Q Consensus 1364 ~~~i~~lp~gLdt~v~e~G~nlS~GQrQll~LARALLk~~~ILiLDEaTsslD~~Te~~Iq~~Ir~~f~~~TvI~IAHRl 1443 (1495)
.+++..+|+|+||.++|+|.+||||||||+|||||++++|+||+||||||++|++|++.+++.+++..+++|+|+||||+
T Consensus 506 ~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l 585 (1284)
T 3g5u_A 506 YDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRL 585 (1284)
T ss_dssp HHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCH
T ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCH
T ss_conf 99997465633450147878659999999999999952999899979877779999999999999973999899994077
Q ss_pred HHHHCCCEEEEEECCEEEEECCHHHHHHCCCCHHHHHHHHH
Q ss_conf 22301398999938489985492478612997689999999
Q 000452 1444 TSVIDSDMVLLLSHGLIEEYDSPRKLLENKSSSFSQLVAEY 1484 (1495)
Q Consensus 1444 ~ti~~~DrIlVLd~G~IvE~g~p~~Ll~~~~s~f~~lv~~~ 1484 (1495)
+++.+||+|+||++|+|+|.|+|++|+++ ++.|++++...
T Consensus 586 ~~i~~~d~i~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~ 625 (1284)
T 3g5u_A 586 STVRNADVIAGFDGGVIVEQGNHDELMRE-KGIYFKLVMTQ 625 (1284)
T ss_dssp HHHTTCSEEEECSSSCCCCEECHHHHHHT-TSHHHHHHHHT
T ss_pred HHHHCCCEEEEEECCEEEEECCHHHHHHC-CCHHHHHHHHH
T ss_conf 89974998999989999997889999867-87799999974
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=714.31 Aligned_cols=565 Identities=24% Similarity=0.311 Sum_probs=485.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999830136899999999999999985699999532567787877650378999999987999999999999999
Q 000452 914 SVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLLIVFVALAFGSSFCILARSTLLAT 993 (1495)
Q Consensus 914 ~~y~~y~~~~~~~~~~~~~~~~~~l~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l~~y~~l~~~~~~~~~~r~~~~~~ 993 (1495)
+.++.|++..++ ...+.+++.++..++.+..++++.+..+......+......++.+++++.++..++.+.+.++...
T Consensus 26 ~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (598)
T 3qf4_B 26 RRLLGYLRPHTF--TLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLT 103 (598)
T ss_dssp HHHGGGTGGGHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999--999999999999999999999999999999736888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999988038763021346552045873425698735579999999999999999999999879999999
Q 000452 994 AGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIVF 1073 (1495)
Q Consensus 994 ~~~~~s~~l~~~ll~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~~~~~~~~~~l~~i~v~~~~~~~~~~i~ 1073 (1495)
.+.+...+++.++++++++.|++||+++++|+++||+++|++.++..+...+..++...+.+++.+++++..+|++.++.
T Consensus 104 ~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~ 183 (598)
T 3qf4_B 104 LSQDVVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVT 183 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999779999976888899999999999999999999999999999999999999999989999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 99999999999999999999999998841057999998411138887614289999999999997401599999999999
Q 000452 1074 IPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEWL 1153 (1495)
Q Consensus 1074 ip~~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1153 (1495)
+..+++++.+..++.+..++..+......+.+.+++.|+++|+.+||+|++|+++.+++.+..+...+..........+.
T Consensus 184 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (598)
T 3qf4_B 184 LSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVL 263 (598)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999973799999748709999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 999999999999999999-9984389778999999999999999999999999999999866999999874199999986
Q 000452 1154 GFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPLE 1232 (1495)
Q Consensus 1154 ~~rl~~l~~~~~~~~~~~-~i~~~~~~~~~~~~glalsy~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~~ 1232 (1495)
....+++..+..+++.++ ......|.+++|.+...+.|...+..++..+...+..++..+.+++|+.++.+.|+|.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~- 342 (598)
T 3qf4_B 264 PPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDD- 342 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-
T ss_conf 9999999999999999999999985997899999999999999999999999999999999999999999768877777-
Q ss_pred CCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
Q ss_conf 65589999999962189741067858999941000168850893999996999898899999833566986379996973
Q 000452 1233 IEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGID 1312 (1495)
Q Consensus 1233 ~~~~~~~~~wp~~g~I~~~nv~~~Y~~~~~~vL~~is~~i~~GekigIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~d 1312 (1495)
..+.+.++..|.|+++||+++|+++ .++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||.|
T Consensus 343 ---~~~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~ 418 (598)
T 3qf4_B 343 ---PDAVELREVRGEIEFKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGID 418 (598)
T ss_dssp ---SSCCCCCSCCCCEEEEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEE
T ss_pred ---CCCCCCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEE
T ss_conf ---7777777777718999989977999-860122279986998899989999969999999945857998089999998
Q ss_pred CCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 89999777722438981567678775777049998-99999999999983996789710088652122699988903999
Q 000452 1313 ISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE-EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQ 1391 (1495)
Q Consensus 1313 I~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~-~~sD~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nlS~GQrQ 1391 (1495)
+++++.+++|++++++||||.+|++|+|+|+.... ..+|++++++++.+++.++++.+|+|+||.++|+|.+|||||||
T Consensus 419 i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Q 498 (598)
T 3qf4_B 419 IRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQ 498 (598)
T ss_dssp GGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHH
T ss_pred HHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHH
T ss_conf 30188999984108990798232463999974479999999999999996978889746453236422788987999999
Q ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECCHHHHHH
Q ss_conf 99999987259986998758889999989999999998569927998705902230139899993848998549247861
Q 000452 1392 LVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKLLE 1471 (1495)
Q Consensus 1392 ll~LARALLk~~~ILiLDEaTsslD~~Te~~Iq~~Ir~~f~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~g~p~~Ll~ 1471 (1495)
|+|||||++++|+||+||||||++|++++..|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|++
T Consensus 499 rv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 578 (598)
T 3qf4_B 499 LLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQ 578 (598)
T ss_dssp HHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHHHHH
T ss_conf 99999999649999999897667999999999999999808998999942778997199899998999998778999986
Q ss_pred CCCCHHHHHHHHHHH
Q ss_conf 299768999999961
Q 000452 1472 NKSSSFSQLVAEYTQ 1486 (1495)
Q Consensus 1472 ~~~s~f~~lv~~~~~ 1486 (1495)
+ ++.|++++.+...
T Consensus 579 ~-~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 579 K-RGFYYELFTSQYG 592 (598)
T ss_dssp T-TCHHHHHHHHHHG
T ss_pred C-CCHHHHHHHHHHH
T ss_conf 7-8779999999764
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=713.15 Aligned_cols=570 Identities=19% Similarity=0.258 Sum_probs=472.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 675089999999983013689999999999999998569999953256778787765-0378999999987999999999
Q 000452 909 GKVEFSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVT-GSMLLIVFVALAFGSSFCILAR 987 (1495)
Q Consensus 909 g~v~~~~y~~y~~~~~~~~~~~~~~~~~~l~~~~~~~~~~wl~~~~~~~~~~~~~~~-~~~~l~~y~~l~~~~~~~~~~r 987 (1495)
|...++.++.|++..++ ...+.+++.++..+..++.++++.++.+..... .... ...+...++++.+...++.+.+
T Consensus 7 g~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (587)
T 3qf4_A 7 GGGGSKTLARYLKPYWI--FAVLAPLFMVVEVICDLSQPTLLARIVDEGIAR-GDFSLVLKTGILMLIVALIGAVGGIGC 83 (587)
T ss_dssp -CCCCCCGGGGTGGGHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-TCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 85349999999999999--999999999999999999999999999998736-987999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999988038763021346552045873425698735579999999999999999999999879
Q 000452 988 STLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAW 1067 (1495)
Q Consensus 988 ~~~~~~~~~~~s~~l~~~ll~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~~~~~~~~~~l~~i~v~~~~~~ 1067 (1495)
.++....+.+...+++.++++++++.|+.||+++++|+++||+++|++.++..+...+..++...+.+++.+++++.++|
T Consensus 84 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~ 163 (587)
T 3qf4_A 84 TVFASYASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINV 163 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999788979976588899999999999999999999999999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHH
Q ss_conf 99999999999999999999999999999998841057999998411138887614289999999999997401599999
Q 000452 1068 QVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVA 1147 (1495)
Q Consensus 1068 ~~~~i~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~ 1147 (1495)
.+.++.+..+++...+..++.+..+...+......+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+......
T Consensus 164 ~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 243 (587)
T 3qf4_A 164 KLSSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAF 243 (587)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999985599999862149999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999999999999999-9984389778999999999999999999999999999999866999999874199
Q 000452 1148 AAMEWLGFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIP 1226 (1495)
Q Consensus 1148 ~~~~wl~~rl~~l~~~~~~~~~~~-~i~~~~~~~~~~~~glalsy~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~ 1226 (1495)
....+......++..+..+++.++ ......|.+++|.+...+.|...+..++..+...+..+.....+.+|+.++.+.+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~ 323 (587)
T 3qf4_A 244 SLIVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEK 323 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999999999999999849938999999999999999999999999999999999999999997689
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 99998665589999999962189741067858999941000168850893999996999898899999833566986379
Q 000452 1227 SEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQI 1306 (1495)
Q Consensus 1227 ~E~~~~~~~~~~~~~wp~~g~I~~~nv~~~Y~~~~~~vL~~is~~i~~GekigIVGrTGSGKSTLl~~L~rl~ep~~G~I 1306 (1495)
++.+. ...+.+.++..|.|+++||+++|+++.+++|+|+||++++||++||||+||||||||+++|.|+++|++|+|
T Consensus 324 ~~~~~---~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i 400 (587)
T 3qf4_A 324 PAIEE---ADNALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRV 400 (587)
T ss_dssp CSCCC---CTTCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEE
T ss_pred CCCCC---CCCCCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
T ss_conf 76578---877656688888079978899848999764211179986998899989999979999999927866998679
Q ss_pred EECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCC-CCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 9969738999977772243898156767877577704999-899999999999983996789710088652122699988
Q 000452 1307 LIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENW 1385 (1495)
Q Consensus 1307 ~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~-~~~sD~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nl 1385 (1495)
.+||.|+++++.+++|++++++||||.+|++|+|+|+... ..++|++++++++.+++.+++..+|+|+|+.++|+|.+|
T Consensus 401 ~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~L 480 (587)
T 3qf4_A 401 EVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNF 480 (587)
T ss_dssp EESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSS
T ss_pred EECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCC
T ss_conf 89999834078999984138977898676755999985248899999999999996849999756531212751898992
Q ss_pred CCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECC
Q ss_conf 90399999999987259986998758889999989999999998569927998705902230139899993848998549
Q 000452 1386 SMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDS 1465 (1495)
Q Consensus 1386 S~GQrQll~LARALLk~~~ILiLDEaTsslD~~Te~~Iq~~Ir~~f~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~g~ 1465 (1495)
|||||||+|||||++++|+||+||||||++|++|++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+
T Consensus 481 SgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~ 560 (587)
T 3qf4_A 481 SGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGT 560 (587)
T ss_dssp CHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 99999999999999729999999797544799999999999998679998999822768898199899998998999788
Q ss_pred HHHHHHCCCCHHHHHHHHHH
Q ss_conf 24786129976899999996
Q 000452 1466 PRKLLENKSSSFSQLVAEYT 1485 (1495)
Q Consensus 1466 p~~Ll~~~~s~f~~lv~~~~ 1485 (1495)
|++|+++ ++.|++++.+..
T Consensus 561 ~~el~~~-~~~~~~~~~~~~ 579 (587)
T 3qf4_A 561 HKELLEH-CKPYREIYESQF 579 (587)
T ss_dssp HHHHHHH-CHHHHHHHHHHC
T ss_pred HHHHHHC-CCHHHHHHHHHH
T ss_conf 9999867-839999999984
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=692.22 Aligned_cols=563 Identities=19% Similarity=0.243 Sum_probs=464.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCH-----HHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999830136899999999999999985699999532567787877--650-----37899999998799999999
Q 000452 914 SVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPR--VTG-----SMLLIVFVALAFGSSFCILA 986 (1495)
Q Consensus 914 ~~y~~y~~~~~~~~~~~~~~~~~~l~~~~~~~~~~wl~~~~~~~~~~~~~--~~~-----~~~l~~y~~l~~~~~~~~~~ 986 (1495)
+.++.|++...+.. .+.+++.++..+..++.++.+.+..+........ ... ..+..++.++.+...++.+.
T Consensus 3 ~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (578)
T 4a82_A 3 KRYLQFVKPYKYRI--FATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFI 80 (578)
T ss_dssp HHHHHHHGGGHHHH--HHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999988999999--9999999999999999999999999999816871146778888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998803876302134655204587342569873557999999999999999999999987
Q 000452 987 RSTLLATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVA 1066 (1495)
Q Consensus 987 r~~~~~~~~~~~s~~l~~~ll~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~~~~~~~~~~l~~i~v~~~~~ 1066 (1495)
+.++....+.+...+++.++++++++.|++||+++++|++++|+++|++.++..+...+..++...+.+++.+++++..+
T Consensus 81 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 160 (578)
T 4a82_A 81 RQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLD 160 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999987899997689869999999999999999999999999999999999999999996
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHH
Q ss_conf 99999999999999999999999999999999884105799999841113888761428999999999999740159999
Q 000452 1067 WQVFIVFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHV 1146 (1495)
Q Consensus 1067 ~~~~~i~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~ 1146 (1495)
|++.++.+..+++++.+..++.+..++..+......++..+++.|+++|+.+||+|+.|+++.+++.+..+...+.....
T Consensus 161 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 240 (578)
T 4a82_A 161 VKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKH 240 (578)
T ss_dssp TTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998249999981664999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999999999999999999-998438977899999999999999999999999999999986699999987419
Q 000452 1147 AAAMEWLGFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCI 1225 (1495)
Q Consensus 1147 ~~~~~wl~~rl~~l~~~~~~~~~~~-~i~~~~~~~~~~~~glalsy~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~ 1225 (1495)
.....+.......+..+..+.+..+ ...+..|.+++|.+...+.|...+..++..+...+..++....+.+|+.++.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 320 (578)
T 4a82_A 241 TRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDE 320 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999985995899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 99999866558999999996218974106785899994100016885089399999699989889999983356698637
Q 000452 1226 PSEPPLEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQ 1305 (1495)
Q Consensus 1226 ~~E~~~~~~~~~~~~~wp~~g~I~~~nv~~~Y~~~~~~vL~~is~~i~~GekigIVGrTGSGKSTLl~~L~rl~ep~~G~ 1305 (1495)
++|.+. ...+.+.++..|.|+++||+++|+++.+++|+|+||++++||++||||+||||||||+++|.|+++|++|+
T Consensus 321 ~~~~~~---~~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~ 397 (578)
T 4a82_A 321 DYDIKN---GVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQ 397 (578)
T ss_dssp CCSSCC---CTTCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEE
T ss_pred CCCCCC---CCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE
T ss_conf 976667---87766667778807999999975899974134337998799999998999985999999984678899967
Q ss_pred EEECCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCC-CCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCC
Q ss_conf 99969738999977772243898156767877577704999-89999999999998399678971008865212269998
Q 000452 1306 ILIDGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPL-EEYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGEN 1384 (1495)
Q Consensus 1306 I~IDG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~-~~~sD~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1384 (1495)
|.+||.|+++++.+++|++++++||||.+|++|+|+|+... ...++++++++++.+++.+++..+|+|+||.++|+|.+
T Consensus 398 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~ 477 (578)
T 4a82_A 398 ILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVK 477 (578)
T ss_dssp EEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTT
T ss_pred EEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCC
T ss_conf 99999984427899996006899289834764599998527999889999999988095999975733010253068896
Q ss_pred CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEEC
Q ss_conf 89039999999998725998699875888999998999999999856992799870590223013989999384899854
Q 000452 1385 WSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1385 lS~GQrQll~LARALLk~~~ILiLDEaTsslD~~Te~~Iq~~Ir~~f~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~g 1464 (1495)
||||||||++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|
T Consensus 478 LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 557 (578)
T 4a82_A 478 LSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557 (578)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 79999999999999974999999978654579999999999999980899799983178999719989999899899988
Q ss_pred CHHHHHHCCCCHHHHHHH
Q ss_conf 924786129976899999
Q 000452 1465 SPRKLLENKSSSFSQLVA 1482 (1495)
Q Consensus 1465 ~p~~Ll~~~~s~f~~lv~ 1482 (1495)
+|++|+++ ++.|+++++
T Consensus 558 ~~~el~~~-~~~~~~~~~ 574 (578)
T 4a82_A 558 THRELIAK-QGAYEHLYS 574 (578)
T ss_dssp CHHHHHHT-TSHHHHHHT
T ss_pred CHHHHHHC-CCHHHHHHH
T ss_conf 89999858-838999998
No 8
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=689.00 Aligned_cols=562 Identities=20% Similarity=0.270 Sum_probs=481.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999830136899999999999999985699999532567787877650378-99999998799999999999999
Q 000452 914 SVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSML-LIVFVALAFGSSFCILARSTLLA 992 (1495)
Q Consensus 914 ~~y~~y~~~~~~~~~~~~~~~~~~l~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~-l~~y~~l~~~~~~~~~~r~~~~~ 992 (1495)
+.++.|++..++ ...+.+++.++..+..+..++++.+..+.... ........+ ..+++++.++..++.+.+.++..
T Consensus 14 ~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (582)
T 3b60_A 14 RRLWPTIAPFKA--GLIVAGIALILNAASDTFMLSLLKPLLDDGFG-KTDRSVLLWMPLVVIGLMILRGITSYISSYCIS 90 (582)
T ss_dssp HHHHHHHGGGHH--HHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTT-STTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999--99999999999999999999999999998843-686579999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998803876302134655204587342569873557999999999999999999999987999999
Q 000452 993 TAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFIV 1072 (1495)
Q Consensus 993 ~~~~~~s~~l~~~ll~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~~~~~~~~~~l~~i~v~~~~~~~~~~i 1072 (1495)
..+.+...+++.++++++++.|++||+++++|++++|+++|++.++..+...+..++..++.+++.++++++++|++.++
T Consensus 91 ~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li 170 (582)
T 3b60_A 91 WVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSII 170 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999980999997889865899999987999999999999999999999999999999980999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Q ss_conf 99999999999999999999999999884105799999841113888761428999999999999740159999999999
Q 000452 1073 FIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAMEW 1152 (1495)
Q Consensus 1073 ~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1152 (1495)
.+..+++++.+..++.+..++..+......+.+.+++.|+++|+.+||+|+.|+++.+++.+..+.+.+..........|
T Consensus 171 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (582)
T 3b60_A 171 LVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSI 250 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999619999983768999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999999999999999-98438977899999999999999999999999999999986699999987419999998
Q 000452 1153 LGFRLDMLSNITFAFSLVFL-ISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPPL 1231 (1495)
Q Consensus 1153 l~~rl~~l~~~~~~~~~~~~-i~~~~~~~~~~~~glalsy~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~~ 1231 (1495)
.....+++..+..+.+.++. ..+..|.+++|.+...+.|...+..++..+...+.+++....+++|+.++.+.|+|.+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 330 (582)
T 3b60_A 251 SDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDE 330 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999999999999984999899999999999999999999999999999999999999999759987667
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCE
Q ss_conf 66558999999996218974106785899994100016885089399999699989889999983356698637999697
Q 000452 1232 EIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDGI 1311 (1495)
Q Consensus 1232 ~~~~~~~~~~wp~~g~I~~~nv~~~Y~~~~~~vL~~is~~i~~GekigIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG~ 1311 (1495)
. +.+.++..+.|+++||+++|+++..++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||.
T Consensus 331 ---~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~ 405 (582)
T 3b60_A 331 ---G--KRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGH 405 (582)
T ss_dssp ---C--CBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTE
T ss_pred ---C--CCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCE
T ss_conf ---7--77777888847999889973999974415615997699989998999998999999986106898976979999
Q ss_pred ECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCHH
Q ss_conf 389999777722438981567678775777049998--999999999999839967897100886521226999889039
Q 000452 1312 DISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE--EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQ 1389 (1495)
Q Consensus 1312 dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~--~~sD~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nlS~GQ 1389 (1495)
|+++++.+++|++++++||||.+|++|+|+|+.... +.++++++++++++++.++++.+|+|+||.++|+|.+|||||
T Consensus 406 ~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq 485 (582)
T 3b60_A 406 DLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQ 485 (582)
T ss_dssp ETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHH
T ss_pred ECCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf 82306999999608088068747787899998545999989999999999849799998450411451147988789999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999872599869987588899999899999999985699279987059022301398999938489985492478
Q 000452 1390 RQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRKL 1469 (1495)
Q Consensus 1390 rQll~LARALLk~~~ILiLDEaTsslD~~Te~~Iq~~Ir~~f~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~g~p~~L 1469 (1495)
|||++||||++++|+|++||||||++|++++..+++.|++..+++|+|+|+||++++..||+|++|++|+++|.|+|++|
T Consensus 486 ~qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 565 (582)
T 3b60_A 486 RQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSEL 565 (582)
T ss_dssp HHHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997289989997865557989999999999999679979999454778985998999978889884589999
Q ss_pred HHCCCCHHHHHHHHH
Q ss_conf 612997689999999
Q 000452 1470 LENKSSSFSQLVAEY 1484 (1495)
Q Consensus 1470 l~~~~s~f~~lv~~~ 1484 (1495)
+++ ++.|+++++..
T Consensus 566 ~~~-~~~~~~~~~~q 579 (582)
T 3b60_A 566 LAQ-HGVYAQLHKMQ 579 (582)
T ss_dssp HHH-TSSHHHHHHHT
T ss_pred HHC-CCHHHHHHHHH
T ss_conf 876-98899999975
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=687.26 Aligned_cols=563 Identities=21% Similarity=0.316 Sum_probs=481.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999999998301368999999999999999856999995325677878776503789-999999879999999999999
Q 000452 913 FSVYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKPRVTGSMLL-IVFVALAFGSSFCILARSTLL 991 (1495)
Q Consensus 913 ~~~y~~y~~~~~~~~~~~~~~~~~~l~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~l-~~y~~l~~~~~~~~~~r~~~~ 991 (1495)
++.++.|++..++. ..+.+++.++..+..++.++++.+..+.... ........++ .+++++.++..++.+.+.++.
T Consensus 13 ~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (582)
T 3b5x_A 13 FKRLWTYIRLYKAG--LVVSTIALVINAAADTYMISLLKPLLDEGFG-NAESNFLRILPFMILGLMFVRGLSGFASSYCL 89 (582)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998899999--9999999999999999999999999999864-68667999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999880387630213465520458734256987355799999999999999999999998799999
Q 000452 992 ATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFI 1071 (1495)
Q Consensus 992 ~~~~~~~s~~l~~~ll~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~~~~~~~~~~l~~i~v~~~~~~~~~~ 1071 (1495)
...+.+...+++.++++++++.|++||+++++|++++|+++|++.++..+...+..++...+.+++.++++++++|++.+
T Consensus 90 ~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 169 (582)
T 3b5x_A 90 SWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSL 169 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998699999778987899999998899999999999999999999999999999998299999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 99999999999999999999999999988410579999984111388876142899999999999974015999999999
Q 000452 1072 VFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAME 1151 (1495)
Q Consensus 1072 i~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1151 (1495)
+.+..+++++.+..++.+..++..+......+.+.+++.|+++|+.+||+|+.|+++.+++.+..+...+..........
T Consensus 170 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (582)
T 3b5x_A 170 VLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQS 249 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999951999997087599999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999999-99843897789999999999999999999999999999998669999998741999999
Q 000452 1152 WLGFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPP 1230 (1495)
Q Consensus 1152 wl~~rl~~l~~~~~~~~~~~-~i~~~~~~~~~~~~glalsy~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~ 1230 (1495)
|.....+++..+..+.+.++ ...+..|.+++|.+...+.|...+..++..+...+.+++....+.+|+.++.+.++|.+
T Consensus 250 ~~~~~~~~~~~~~~~~i~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~ 329 (582)
T 3b5x_A 250 IADPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERD 329 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999998599889999999999999999999999999999999999999999975897677
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 86655899999999621897410678589999410001688508939999969998988999998335669863799969
Q 000452 1231 LEIEESRPNHSWPSHGKIDLRDLQVRYAPHMPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILIDG 1310 (1495)
Q Consensus 1231 ~~~~~~~~~~~wp~~g~I~~~nv~~~Y~~~~~~vL~~is~~i~~GekigIVGrTGSGKSTLl~~L~rl~ep~~G~I~IDG 1310 (1495)
+. +.+.++..+.|+++||+++|+++.+++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+||
T Consensus 330 ---~~--~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g 404 (582)
T 3b5x_A 330 ---NG--KYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDG 404 (582)
T ss_pred ---CC--CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC
T ss_conf ---77--7777778882899998997289986540041699879998999899999799999999657789998798999
Q ss_pred EECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCH
Q ss_conf 7389999777722438981567678775777049998--99999999999983996789710088652122699988903
Q 000452 1311 IDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE--EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMG 1388 (1495)
Q Consensus 1311 ~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~--~~sD~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~nlS~G 1388 (1495)
.|+.+++.+++|++++++||||.+|++|+|+|+.... +.++++++++++++++.++++.+|+|+||.++|+|.+||||
T Consensus 405 ~~~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgG 484 (582)
T 3b5x_A 405 HDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGG 484 (582)
T ss_pred EEHHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHH
T ss_conf 98563889999648589827990531029999856688999999999999987989999847653345106888847999
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEECCHHH
Q ss_conf 99999999987259986998758889999989999999998569927998705902230139899993848998549247
Q 000452 1389 QRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYDSPRK 1468 (1495)
Q Consensus 1389 QrQll~LARALLk~~~ILiLDEaTsslD~~Te~~Iq~~Ir~~f~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~g~p~~ 1468 (1495)
||||++||||++++|+|++||||||++|++++..+++.|++..+++|+|+|+||++++..||+|++|++|+++|.|+|++
T Consensus 485 q~qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 564 (582)
T 3b5x_A 485 QRQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHAD 564 (582)
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHH
T ss_conf 99999999999749999999785446899999999999999728998999936889998199899998998999778999
Q ss_pred HHHCCCCHHHHHHHHH
Q ss_conf 8612997689999999
Q 000452 1469 LLENKSSSFSQLVAEY 1484 (1495)
Q Consensus 1469 Ll~~~~s~f~~lv~~~ 1484 (1495)
|+++ ++.|+++++..
T Consensus 565 l~~~-~~~~~~~~~~q 579 (582)
T 3b5x_A 565 LLAQ-DGAYAQLHRIQ 579 (582)
T ss_pred HHHC-CCHHHHHHHHH
T ss_conf 9848-85899999986
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=680.65 Aligned_cols=567 Identities=21% Similarity=0.269 Sum_probs=471.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC-CC--CHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999983013689999999999999998569999953256778787-76--503789999999879999999999999
Q 000452 915 VYWKYITAAYGGVLVPFILLAQTLFQILQIASNYWIAWATPASKDIKP-RV--TGSMLLIVFVALAFGSSFCILARSTLL 991 (1495)
Q Consensus 915 ~y~~y~~~~~~~~~~~~~~~~~~l~~~~~~~~~~wl~~~~~~~~~~~~-~~--~~~~~l~~y~~l~~~~~~~~~~r~~~~ 991 (1495)
.++.|++...+. ..+.+++.++..+...+.++++.+..+......+ .. ....++.+++++.++..++.+.+.++.
T Consensus 9 ~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (595)
T 2yl4_A 9 KLLGLAYPERRR--LAAAVGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLM 86 (595)
T ss_dssp HHHHHHGGGHHH--HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999998878999--999999999999999999999999999997357402667999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999880387630213465520458734256987355799999999999999999999998799999
Q 000452 992 ATAGYKTATLLFNKMHYCIFRAPMSFFDATPSGRIINRASTDQSAVDLSIPALIGSFAFSIIRVLGVIGVMSLVAWQVFI 1071 (1495)
Q Consensus 992 ~~~~~~~s~~l~~~ll~~il~ap~~ffd~tp~GrilnR~s~D~~~id~~i~~~l~~~~~~~~~~l~~i~v~~~~~~~~~~ 1071 (1495)
...+.+...+++.++++++++.|++||+++++|++++|+++|++.++..+...+..++..++.+++.++++++++|++.+
T Consensus 87 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l 166 (595)
T 2yl4_A 87 QTSGQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLAT 166 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999998199999777984889999999999999999999999999999999999999998199999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf 99999999999999999999999999988410579999984111388876142899999999999974015999999999
Q 000452 1072 VFIPVIATCIWYQQYYISSARELSRLVGVCKAPLIQHFAETVSGSTTIRSFDQESRFIDTNMELMDGYSRPTFHVAAAME 1151 (1495)
Q Consensus 1072 i~ip~~~~~~~~~~~y~~~~r~l~rl~~~~~spi~~~~~Etl~G~~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1151 (1495)
+.+..+++...+..++.+..++..+......+.+.+++.|+++|+.+||+|+.|+++.+++.+..+.+.+..........
T Consensus 167 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (595)
T 2yl4_A 167 FVLSVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARA 246 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999811999998375699999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999999-99843897789999999999999999999999999999998669999998741999999
Q 000452 1152 WLGFRLDMLSNITFAFSLVF-LISIPKGFIDPAIAGLAVTYGLTLNNLQAMLIWLACQMENKIISVERIFQYTCIPSEPP 1230 (1495)
Q Consensus 1152 wl~~rl~~l~~~~~~~~~~~-~i~~~~~~~~~~~~glalsy~l~l~~~~~~~i~~~~~le~~~~sveRi~~~~~~~~E~~ 1230 (1495)
|......++..+..+.+.++ ...+..|.+++|.....+.|...+..++..+...+..++....+++|+.++.+.++|.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 326 (595)
T 2yl4_A 247 GFFGATGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPKLP 326 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999998699789999999999999999999999999999999999999999983897667
Q ss_pred CCCCCCCCCCCCCCCCE-EEEEEEEEEECCC-CCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 86655899999999621-8974106785899-994100016885089399999699989889999983356698637999
Q 000452 1231 LEIEESRPNHSWPSHGK-IDLRDLQVRYAPH-MPFVLRGISCTFPGEKKTGIVGRTGSGKSTLIQTLFRIVEPAAGQILI 1308 (1495)
Q Consensus 1231 ~~~~~~~~~~~wp~~g~-I~~~nv~~~Y~~~-~~~vL~~is~~i~~GekigIVGrTGSGKSTLl~~L~rl~ep~~G~I~I 1308 (1495)
.. ...+ +..+..|. |+++||+++|+.+ ..++|+|+||++++||++||||+||||||||+++|.|+++|++|+|.+
T Consensus 327 ~~--~~~~-~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~ 403 (595)
T 2yl4_A 327 FN--EGVI-LNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISL 403 (595)
T ss_dssp SS--CSBC-CCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEE
T ss_pred CC--CCCC-CCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 77--7877-77678998389998899858998881201127998499889998999997999999982585789837999
Q ss_pred CCEECCCCCHHHHHCCCEEECCCCCCCCCCHHHHCCCCC----CCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCC
Q ss_conf 697389999777722438981567678775777049998----9999999999998399678971008865212269998
Q 000452 1309 DGIDISLIGLHDLRTRLSIIPQDPVMFEGTVRSNVDPLE----EYTDEQIWEALDKCQLGDEVRKKEGKLDSKVTENGEN 1384 (1495)
Q Consensus 1309 DG~dI~~i~l~~LR~~i~iIpQdp~LF~GTIR~NLdp~~----~~sD~eI~~aL~~~~L~~~i~~lp~gLdt~v~e~G~n 1384 (1495)
||.|+++++.+++|++++++||+|.+|++|+++|+.... ..++++++++++++++.++++.+|+|+|+.++|+|.+
T Consensus 404 ~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~ 483 (595)
T 2yl4_A 404 DGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVL 483 (595)
T ss_dssp TTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCC
T ss_pred CCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99981117999997322898368832687799998405877665689999999998697999974732013501688786
Q ss_pred CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCEEEEEECCEEEEEC
Q ss_conf 89039999999998725998699875888999998999999999856992799870590223013989999384899854
Q 000452 1385 WSMGQRQLVCLGRVLLKRRKILMLDEATASVDTATDNLIQQSLRQHFSDCTVITIAHRITSVIDSDMVLLLSHGLIEEYD 1464 (1495)
Q Consensus 1385 lS~GQrQll~LARALLk~~~ILiLDEaTsslD~~Te~~Iq~~Ir~~f~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~g 1464 (1495)
||||||||++||||++++|+|++||||||++|++++..+++.|++..+++|+|+|+||++++..||+|++|++|+++|.|
T Consensus 484 LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 563 (595)
T 2yl4_A 484 LSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYG 563 (595)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 89999999999999975999999988666899899999999999996599799994687899759989999899899978
Q ss_pred CHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 9247861299768999999961
Q 000452 1465 SPRKLLENKSSSFSQLVAEYTQ 1486 (1495)
Q Consensus 1465 ~p~~Ll~~~~s~f~~lv~~~~~ 1486 (1495)
+|++|++++++.|+++++....
T Consensus 564 ~~~~l~~~~~~~~~~~~~~q~~ 585 (595)
T 2yl4_A 564 KHEELLSKPNGIYRKLMNKQSF 585 (595)
T ss_dssp CSCC------C-----------
T ss_pred CHHHHHHCCCHHHHHHHHHHHC
T ss_conf 8999974787299999997430
Done!