BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000456
(1484 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255552654|ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3, putative [Ricinus communis]
Length = 1641
Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/1614 (44%), Positives = 918/1614 (56%), Gaps = 222/1614 (13%)
Query: 1 MRLKELALDLENQRQIQK-RDPEGKKVL---SDMENCSERTDGVSASDDKENLDEMLAAS 56
MRLKELA DLENQR+ QK D +GKK+L S +EN E + D+E LDEMLAAS
Sbjct: 117 MRLKELAKDLENQRRKQKIDDAKGKKILLEESKIENNDEDVENY----DQEILDEMLAAS 172
Query: 57 IAAEANESSSKSASKSATANLLEEDGDEDEEIILPTMGGNVDPAVFAALPPSMQHQLLVR 116
IAAE S +AS SA + ED T GNV
Sbjct: 173 IAAEDERRFSNTASASAVQDPENEDH---------TSNGNV------------------- 204
Query: 117 NNDAKGKNVLSD--DLGQADTVGISPESHDVVSKSRDHKKLDEMLAASIAAEEDGSLSNN 174
K VL D D+ + D E DVV++S + +KLDEMLAASIAAEED N
Sbjct: 205 ------KEVLIDLIDMERTDL-----ERDDVVAESYNQEKLDEMLAASIAAEEDVISINT 253
Query: 175 ASASAASLPLEEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQ 234
AS SAA++P EEE DE EEMILP + G VDP VLAALPPSMQLDLLVQMRE+L+AENRQ
Sbjct: 254 ASTSAAAIPSEEEGNDEVEEMILPEICGKVDPTVLAALPPSMQLDLLVQMRERLIAENRQ 313
Query: 235 KYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIF 294
KYQKVKKAPEKFSELQI+AYLKTVAFRREID VQKAAAG GV GVQ+SRIASEANREFIF
Sbjct: 314 KYQKVKKAPEKFSELQIEAYLKTVAFRREIDHVQKAAAGNGVGGVQSSRIASEANREFIF 373
Query: 295 SSSFTGDKQVLTSSRVEGKKDEQQQIPSEHPVSDSANNGASIDKSNFSSTDQSNSVTKLG 354
SSSFTGDKQ+LTS+ V+ ++QQQ P+ +P DS N +ST +SN+V+
Sbjct: 374 SSSFTGDKQLLTSTGVQRNGNKQQQAPTMNPTFDSMNC--------VTSTSKSNAVSGSV 425
Query: 355 PEESRKSFADDVETYLDERGRVRLSKVRAMGIRMTRDLQRNLEMMKEIEQERPNGNNITG 414
+E R+ F +DVETYLDE GR+R+S+VRAMG+RMTRDLQRNL++MKEIEQER +
Sbjct: 426 QDEPRRVFDEDVETYLDENGRIRVSRVRAMGMRMTRDLQRNLDLMKEIEQERTHAIETAP 485
Query: 415 AGSMLTLNETGTSKAVPSEKRKFIGTSLDDTNESVSSIERNKQSTLKSGISLELSFKDNS 474
+ S LT ++ G+ K+ PS K+ + +S D ++SV ERN+QS L S+++SF+ +
Sbjct: 486 SQSELTRDKIGSPKSFPS-KKLHVESSHDKHSDSVKLNERNQQSMLNDEGSIQISFEADG 544
Query: 475 ENNC-DDDDDIFAHLAAGKPVIFPN----SPRAHSSISVSDSDWEEGTTERKGSSLSDDA 529
+ C D DDD+F L AG+PV P+ + R +S S SD DWEEGT E +G+S S++
Sbjct: 545 RSKCLDSDDDVFTSLVAGQPVNIPSVDNITSRIQTSDSASDGDWEEGTIETRGNSSSNNL 604
Query: 530 NAGINPPLNLEEGGISDESEVEWEEGPSCAPKSSLSFPAESEKTVSN--IEEEANLQEAI 587
NPPL +E ISD+SEVEWE+G SS FP+ES+ S +EEEA+LQEAI
Sbjct: 605 ALETNPPL--KEKNISDDSEVEWEDGGGDHENSS--FPSESKMPASRGYMEEEADLQEAI 660
Query: 588 RRSLLDVCIEKPNYALSEHNKCENLGENACDGTWLYDRENNMDDPNFLGESVSQQHESIC 647
RRSL D+ E N LSEH K + +N D+E+N + V+QQ +
Sbjct: 661 RRSLEDLGGEIFNNTLSEHEKLKISDKNVYKDVGFLDQEDNTGGLILPEKDVTQQDQPFS 720
Query: 648 EYVDGLGKLDTVGGINNSEVIGSLGRELKLYEPRNSDEKEMLINKPFEKDNSYFEQSRQG 707
E + GK+D VG + S+V S +L E + D ++L NK +E+D G
Sbjct: 721 E-ISATGKIDKVGQYDISQVFSSQS-QLAFSEAHDPDNMDILTNKLYERD--------MG 770
Query: 708 ANDG-----ANDGRSLC-------SDAPCEDSGTTMELTEVQLVKGRCLSASAKGDEHLT 755
+NDG N S+C S AP E + +E V+ LS S K ++
Sbjct: 771 SNDGQPSRALNMEGSVCRGMSSAESAAPLETHVILKQFSETN-VEDMGLSTSTKMRSGIS 829
Query: 756 H---------------EDKKNNCEAETSVLPGDKKNEIEVEMKHDFTAEPSCRTVGTSDT 800
+ +D +N EAE SVL ++K E C++V ++
Sbjct: 830 NISKAAWSNVSFASSIDDDRNKVEAEPSVLVNEEKR-----------PETYCQSVKITNP 878
Query: 801 SIPLVKTSGNASIYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEATEKILE 860
S +++ S N +I TD+E K A E+ + KQ+ + EN+ + +E L+
Sbjct: 879 STSVMEPSINLAI-GTDVESKLAGEKNSGHLFNEKKQDMEKVVSN--ENLREDFSEVTLQ 935
Query: 861 EEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 920
EE+ IL E M LG EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM
Sbjct: 936 EEILILGQERMNLGSEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 995
Query: 921 ELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALL 980
ELANLVDGVVTDDSDVFLFGAR+VYKNIFDDRKYVETYFM+DIE++LGLTREKLIRMALL
Sbjct: 996 ELANLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDIERELGLTREKLIRMALL 1055
Query: 981 LGSDYTEGISGIG------IVNAI------------------EVVNAFPEEDGLSKFREW 1016
LGSDYTEGISGIG +VNA ++ DG S R+
Sbjct: 1056 LGSDYTEGISGIGIVNAIEVVNAFPEEDGLEKFREWIYSPDPTILGKLDVRDGRSMRRKG 1115
Query: 1017 -IESPDPTILGKFDVQTGASSRKRRSSDG---------DKDVNYAKN--------SVGGV 1058
+S + ++ F + S ++ S+D DK N +KN S +
Sbjct: 1116 ESDSANNNVVDSFGKKVSESHKEEDSADHTQEIRQIFMDKHRNVSKNWHVPSSFPSEAVI 1175
Query: 1059 SEF-----DESISQFDEDKQSAEYSQNMKKIFM------------------------DKH 1089
S + D+S F K + IF+ +KH
Sbjct: 1176 SAYMSPQVDKSTEPFTWGKPDLHVLRRQVMIFIICWEKFAWGVQKSDELLLPVLKEYNKH 1235
Query: 1090 -TQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRKNNGLE 1148
TQLRLEAFYTFNERFAKIRS+RIKKA+KGITG QS +MDD ++ SKSRKKR E
Sbjct: 1236 ETQLRLEAFYTFNERFAKIRSRRIKKALKGITGYQSSEMMDDDVKDSSKSRKKRTIGPGE 1295
Query: 1149 NGNNRSQKAPKKAEESV-SGAQNNMEKSSQSQSRERKVLEKFVLAEMENPERLTPAGGGR 1207
+ ++ A K+ E + S +++EKS+ +SR+R + VL E ENP + A G R
Sbjct: 1296 SVDSEPDAALKREREGLFSDKTDSLEKSTTKRSRKRTAGQP-VLTERENPGQHLQAEGRR 1354
Query: 1208 NANNVFRGNRRGKGQRVGRGRGRRRLCAEQSETS-SSDDI--GSDDTQEYYSEKFEGQQE 1264
+ G+ RGKG+ GRGRGR R E S SS D G DD E EK EG QE
Sbjct: 1355 KTHKGQCGDGRGKGRGRGRGRGRGRGKGSGIELSDSSYDYVSGDDDELEVRIEKSEGPQE 1414
Query: 1265 VRRSTRSRKPVDYNVDDPEIADVGKILSNKESSNEEEAKQDSVHGVTG---EASADYSRK 1321
+RRSTRSRKP +Y +D ++ DV + + + E A + + GV G +AS+ + K
Sbjct: 1415 LRRSTRSRKPANYTLDGFKV-DVDSAVDRGDKQSNESAAELDLFGVIGKSTDASSCLNGK 1473
Query: 1322 KQHRADDP---SIDKDYIERGGGFCIDDQEIGQPSVSPCDDPFLEAEITKDYMKMGGGFC 1378
+QH+ +D KDY+E G C+ D +P A ++KDY+KMGGGFC
Sbjct: 1474 EQHKVEDALPEDFSKDYLE-NGQHCLTDDNGSEPKYPGG------ASVSKDYLKMGGGFC 1526
Query: 1379 HDESETREDQVAAKDPVVTG--ESPSTCFDSSDGVHCDVGLGDSTTSSNSKEATNGLENV 1436
DESET DQ AA P + E S D G G + K N +++
Sbjct: 1527 MDESETCTDQDAAHSPSMPAFEEMADASNVSGSMEETDRGEGLLPLVCSIKRTLNDMQDG 1586
Query: 1437 GRTDTFDTEPNPVVQNAT--------STDSARNDAGRASRGSLTAMTFLRRKRR 1482
G+T+ D EP+ NAT S + +L+AM FL+RKRR
Sbjct: 1587 GKTNAHDAEPSTDCLNATDIGDHSEASLCLPETTGSKTIAPTLSAMPFLKRKRR 1640
>gi|296087697|emb|CBI34953.3| unnamed protein product [Vitis vinifera]
Length = 1449
Score = 931 bits (2405), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 666/1469 (45%), Positives = 848/1469 (57%), Gaps = 230/1469 (15%)
Query: 105 LPPSMQHQLLVRNNDAKGKNVLSDDLGQADTVGISPESHDVVSKSRDHKKLDEMLAASIA 164
L +++Q L NN+ KGK VLS Q +T G E + VS + + +KLDEMLAAS+A
Sbjct: 122 LAKDLENQRL--NNNDKGKKVLS---YQTETAGEVSEGNSSVSGTYNQEKLDEMLAASLA 176
Query: 165 AEEDGSLSNNASASAASLPLEEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQM 224
AEEDG+ +A S ++D DEDEEM+LP M G VDPAVLAALPPSMQLDLLVQM
Sbjct: 177 AEEDGNFVGDAGISNEE----DDDDDEDEEMMLPIMNGKVDPAVLAALPPSMQLDLLVQM 232
Query: 225 REQLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRI 284
RE+LMAENRQKYQKVKKAP +FSELQIQAYLKTVAFRREIDEVQK+AAGRGV GVQTSRI
Sbjct: 233 REKLMAENRQKYQKVKKAPAEFSELQIQAYLKTVAFRREIDEVQKSAAGRGVGGVQTSRI 292
Query: 285 ASEANREFIFSSSFTGDKQVLTSSRVEGKKDEQQQIPSEHPVSDSANNGASIDKSNFSST 344
ASEANRE+IFSSSFTGDK+ LT+ VE D+Q QIP+E P DS NN AS KSN ++
Sbjct: 293 ASEANREYIFSSSFTGDKEALTNGGVEKNGDKQYQIPTECP-PDSPNNVASTSKSNTAAE 351
Query: 345 DQSNSVTKLGPEESRKSFADDVETYLDERGRVRLSKVRAMGIRMTRDLQRNLEMMKEIEQ 404
+ E F DDVETYLDERGRVR+S+VRAMGIRMTRDLQRNL++MKEIEQ
Sbjct: 352 SVAG--------EPASVFNDDVETYLDERGRVRVSRVRAMGIRMTRDLQRNLDLMKEIEQ 403
Query: 405 ERPNGNNITGAGSMLTLNETGTSKAVPSEKRKFIGTSLDDTNESVSSIERNKQSTLKSGI 464
+R N +N ++TLN+T N+QS +G
Sbjct: 404 DRTNEDN----NGIVTLNKT------------------------------NEQSIPDNGA 429
Query: 465 SLELSFKDNSENNC-DDDDDIFAHLAAGKPVIFPNSPRAHS----SISVSDSDWEEGTTE 519
S+E+SF+D+ E+NC + DD++FA L AG PVI +S A S + S SDSDWEEG E
Sbjct: 430 SIEISFEDDGEHNCLNGDDELFASLVAGNPVIISSSDAALSNRRPADSASDSDWEEGIIE 489
Query: 520 RKGSSLSDDANAGINPPLNLEEGGISDESEVEWEEGPSCAPKSSLSFPAESEKTVSN--I 577
KG S D+ I P ++ E +SD+SEVEWEEGP K+ + P++ S +
Sbjct: 490 EKGGSCIDNVGVEIKP--SVMEERVSDDSEVEWEEGPCDVSKNVSACPSKFGNPASKGRL 547
Query: 578 EEEANLQEAIRRSLLDVCIEKPNYALSEHNKCENLGENACDGTWLYDRENNMDDPNFLGE 637
EEE +LQEAIRRSL D+ EK A+ E K ++ E YD +
Sbjct: 548 EEETDLQEAIRRSLEDLGGEK---AVGESFKDSDIKE--------YDEK----------- 585
Query: 638 SVSQQHESICEYVDGLGKLDTVGGINNSEVIGSLGRELKLYEPRNSDEKEMLINKPFEKD 697
KLD+V G+N S+ I + GR+L N + E+L +
Sbjct: 586 -----------------KLDSVDGMNTSQSIDASGRQLTSLLEDNPHKMEVL-------N 621
Query: 698 NSYFEQSRQGANDGANDGRSLCSDAPCEDSGTTMELTEVQLVKGRCLSASAKGDEHLTHE 757
N E+ ++ + N GR E EV +++ E L+H
Sbjct: 622 NELCEEYQKDVGESGNVGR---------------ETNEVYMIR-----------EQLSHA 655
Query: 758 DKK--------NNCEAETS----VLPGDKKNEIEVE-MKHDFTAEPSCRTVGTSDTSIPL 804
KK N+C + S + G+ + + K+D A P+ + T+D +IP
Sbjct: 656 SKKSVDTSTLANSCSGDGSHISDAMLGNMPDATPADSSKYDSEAAPTWHSNETTDPAIPP 715
Query: 805 VKTSGNASIYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQ 864
+T T +EQK AE + + ++N G T+ +NV TE +L EEM
Sbjct: 716 GETCIKGK---TAVEQKLAEGNNHVNFFMEKERNMGNSVTEDKKNVQFGVTEDVL-EEMM 771
Query: 865 ILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELAN 924
ILD E + LGDEQ+KLERNA+ VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELAN
Sbjct: 772 ILDQECLNLGDEQRKLERNADCVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELAN 831
Query: 925 LVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSD 984
LVDGVVTDDSDVFLFGARSVYKNIFD+RKYVETYFM+DIE +LGL REK+IRMALLLGSD
Sbjct: 832 LVDGVVTDDSDVFLFGARSVYKNIFDERKYVETYFMKDIETELGLNREKVIRMALLLGSD 891
Query: 985 YTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDG 1044
YTEG+SGIGIVNAIEV+N+FPEEDGL KFREW+ESPDP ILGK +V+TG+SSRKR S
Sbjct: 892 YTEGVSGIGIVNAIEVLNSFPEEDGLHKFREWVESPDPNILGKVNVETGSSSRKRGSKHN 951
Query: 1045 --------------DKDVNYAKN-------------SVGGVSEFDESISQFDEDK----- 1072
DK N +KN S + D+S F K
Sbjct: 952 ESVDDIQSGKQIFMDKHRNVSKNWHIPSSFPSETVISAYASPQVDQSTEPFSWGKPDLFV 1011
Query: 1073 --------------QSAEYSQNMKKIFMDKHTQLRLEAFYTFNERFAKIRSKRIKKAVKG 1118
++ E + K + TQLRLEAFYTFNERFAKIRSKRIKKAVKG
Sbjct: 1012 LRKLCLEKFGWGNQKADELLLPVLKEYNKHETQLRLEAFYTFNERFAKIRSKRIKKAVKG 1071
Query: 1119 ITGSQSLLLMDDAGQEVSKSRKKRKNNGLENGNNRSQKAPKKAEESVSGAQNNMEKSSQS 1178
ITGSQ+ L+DDA QE SK K+ K + + N + + + N K++
Sbjct: 1072 ITGSQTSELLDDAVQEGSKRGKRSKESPSKLDNKQEIPINEIGSTAARNGSNATAKTTPK 1131
Query: 1179 QSRERKVLEKFVLAEMENPERLTPA--------GGGRNANNVFRGNRRGKGQRVGRGRGR 1230
QSR R++ K V ++ E+ E A G +N R RG + GR R +
Sbjct: 1132 QSRRRRI-RKPVPSDGESAEPPVQAGQKQCNDTGSSKNGRGKGRKKGRGVRRGRGRSRIQ 1190
Query: 1231 RRLCAEQSETSSSDDIGSDDTQEYYSEKFEGQQEVRRSTRSRKPVDYNVDDPEIADVGKI 1290
+E S TSSS D S + +E ++K +G EVRRS R RK V+Y DD EI D GK
Sbjct: 1191 ENPGSEISGTSSS-DCNSGNEEEVPAQKLDGSNEVRRSKRPRKAVNYANDDLEIDDEGKS 1249
Query: 1291 L--SNKESSNEE----EAKQDSVHGVTGEASADYSRKKQHRADDPS----IDKDYIERGG 1340
L N++ +NEE E +D + + G+A+AD+S K Q +A+D S + DY E G
Sbjct: 1250 LDQGNQKCTNEEAVELEPSRDQI--ICGDAAADFSGKNQQKAEDSSPGEDLCGDYPETEG 1307
Query: 1341 GFCIDDQEIGQPSVSPCDDPFLEAEITKDYMKMGGGFCHDESETREDQVA-AKDPVVTGE 1399
C+D+ EIGQ S DDP E ++DY+KMGGGFC +E E +D A DP
Sbjct: 1308 VMCMDENEIGQLD-SRDDDPTFADEFSEDYLKMGGGFCVEEDEKDKDHNARTYDPA---- 1362
Query: 1400 SPSTCFDSSDGVHCDVGLGDSTTSSNSKEATNGLENVGRTDTFDTEPNPVVQNAT----S 1455
T +++ D ++ + + + S+ + G ++ T DTE N NAT
Sbjct: 1363 KADTIYENPD-PESELAIHPAESVSSLQNTAGGFQS-EPTCQPDTELNLDCPNATIGLSM 1420
Query: 1456 TDSARNDAGRASRGSLTAMTFLRRKRRRS 1484
++ +D G + +L AM FLR+KRR S
Sbjct: 1421 PENTGDDTGTNTVKALRAMPFLRKKRRLS 1449
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 80/120 (66%), Gaps = 9/120 (7%)
Query: 1 MRLKELALDLENQRQIQKRDPEGKKVLS-DMENCSERTDG---VSASDDKENLDEMLAAS 56
MRLKELA DLENQR + D +GKKVLS E E ++G VS + ++E LDEMLAAS
Sbjct: 117 MRLKELAKDLENQR-LNNND-KGKKVLSYQTETAGEVSEGNSSVSGTYNQEKLDEMLAAS 174
Query: 57 IAAEANESSSKSASKSATANLLEEDGDEDEEIILPTMGGNVDPAVFAALPPSMQHQLLVR 116
+AAE + + +N ++D DEDEE++LP M G VDPAV AALPPSMQ LLV+
Sbjct: 175 LAAEED---GNFVGDAGISNEEDDDDDEDEEMMLPIMNGKVDPAVLAALPPSMQLDLLVQ 231
>gi|225452522|ref|XP_002275112.1| PREDICTED: DNA repair protein UVH3-like [Vitis vinifera]
Length = 1513
Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/1012 (50%), Positives = 655/1012 (64%), Gaps = 128/1012 (12%)
Query: 105 LPPSMQHQLLVRNNDAKGKNVLSDDLGQADTVGISPESHDVVSKSRDHKKLDEMLAASIA 164
L +++Q L NN+ KGK VLS Q +T G E + VS + + +KLDEMLAAS+A
Sbjct: 122 LAKDLENQRL--NNNDKGKKVLS---YQTETAGEVSEGNSSVSGTYNQEKLDEMLAASLA 176
Query: 165 AEEDGSLSNNASASAASLPLEEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQM 224
AEEDG+ +A S ++D DEDEEM+LP M G VDPAVLAALPPSMQLDLLVQM
Sbjct: 177 AEEDGNFVGDAGISNEE----DDDDDEDEEMMLPIMNGKVDPAVLAALPPSMQLDLLVQM 232
Query: 225 REQLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRI 284
RE+LMAENRQKYQKVKKAP +FSELQIQAYLKTVAFRREIDEVQK+AAGRGV GVQTSRI
Sbjct: 233 REKLMAENRQKYQKVKKAPAEFSELQIQAYLKTVAFRREIDEVQKSAAGRGVGGVQTSRI 292
Query: 285 ASEANREFIFSSSFTGDKQVLTSSRVEGKKDEQQQIPSEHPVSDSANNGASIDKSNFSST 344
ASEANRE+IFSSSFTGDK+ LT+ VE D+Q QIP+E P DS NN AS KSN ++
Sbjct: 293 ASEANREYIFSSSFTGDKEALTNGGVEKNGDKQYQIPTECP-PDSPNNVASTSKSNTAAE 351
Query: 345 DQSNSVTKLGPEESRKSFADDVETYLDERGRVRLSKVRAMGIRMTRDLQRNLEMMKEIEQ 404
+ E F DDVETYLDERGRVR+S+VRAMGIRMTRDLQRNL++MKEIEQ
Sbjct: 352 SVAG--------EPASVFNDDVETYLDERGRVRVSRVRAMGIRMTRDLQRNLDLMKEIEQ 403
Query: 405 ERPNGNNITGAGSMLTLNETGTSKAVPSEKRKFIGTSLDDTNESVSSIERNKQSTLKSGI 464
+R N +N ++TLN+T N+QS +G
Sbjct: 404 DRTNEDN----NGIVTLNKT------------------------------NEQSIPDNGA 429
Query: 465 SLELSFKDNSENNC-DDDDDIFAHLAAGKPVIFPNSPRAHS----SISVSDSDWEEGTTE 519
S+E+SF+D+ E+NC + DD++FA L AG PVI +S A S + S SDSDWEEG E
Sbjct: 430 SIEISFEDDGEHNCLNGDDELFASLVAGNPVIISSSDAALSNRRPADSASDSDWEEGIIE 489
Query: 520 RKGSSLSDDANAGINPPLNLEEGGISDESEVEWEEGPSCAPKSSLSFPAESEKTVSN--I 577
KG S D+ I P ++ E +SD+SEVEWEEGP K+ + P++ S +
Sbjct: 490 EKGGSCIDNVGVEIKP--SVMEERVSDDSEVEWEEGPCDVSKNVSACPSKFGNPASKGRL 547
Query: 578 EEEANLQEAIRRSLLDVCIEKP------NYALSEHN-KCENLGENACDGTWLYDRENNMD 630
EEE +LQEAIRRSL D+ EK + + E++ K + ++A + ++N+
Sbjct: 548 EEETDLQEAIRRSLEDLGGEKAVGESFKDSDIKEYDEKVHEVKDDA------FHKKNDKA 601
Query: 631 DPNFLGESVSQQHESICEYVDGLGKLDTVGGINNSEVIGSLGRELKLYEPRNSDEKEMLI 690
+ +F E++ +Q+ S C+ VD + KLD+V G+N S+ I + GR+L N + E+L
Sbjct: 602 EQDFPLENLPEQNGSFCKIVDVVEKLDSVDGMNTSQSIDASGRQLTSLLEDNPHKMEVL- 660
Query: 691 NKPFEKDNSYFEQSRQGANDGANDGRSLCSDAPCEDSGTTMELTEVQLVKGRCLSASAKG 750
+N E+ ++ + N GR E EV +++
Sbjct: 661 ------NNELCEEYQKDVGESGNVGR---------------ETNEVYMIR---------- 689
Query: 751 DEHLTHEDKK--------NNCEAETS----VLPGDKKNEIEVE-MKHDFTAEPSCRTVGT 797
E L+H KK N+C + S + G+ + + K+D A P+ + T
Sbjct: 690 -EQLSHASKKSVDTSTLANSCSGDGSHISDAMLGNMPDATPADSSKYDSEAAPTWHSNET 748
Query: 798 SDTSIPLVKTSGNASIYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEATEK 857
+D +IP +T T +EQK AE + + ++N G T+ +NV TE
Sbjct: 749 TDPAIPPGETCIKGK---TAVEQKLAEGNNHVNFFMEKERNMGNSVTEDKKNVQFGVTED 805
Query: 858 ILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQC 917
+L EEM ILD E + LGDEQ+KLERNA+ VSSEMFAECQELLQMFGLPYIIAPMEAEAQC
Sbjct: 806 VL-EEMMILDQECLNLGDEQRKLERNADCVSSEMFAECQELLQMFGLPYIIAPMEAEAQC 864
Query: 918 AYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRM 977
AYMELANLVDGVVTDDSDVFLFGARSVYKNIFD+RKYVETYFM+DIE +LGL REK+IRM
Sbjct: 865 AYMELANLVDGVVTDDSDVFLFGARSVYKNIFDERKYVETYFMKDIETELGLNREKVIRM 924
Query: 978 ALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSR 1037
ALLLGSDYTEG+SGIGIVNAIEV+N+FPEEDGL KFREW+ESPDP ILGK +V+TG+SSR
Sbjct: 925 ALLLGSDYTEGVSGIGIVNAIEVLNSFPEEDGLHKFREWVESPDPNILGKVNVETGSSSR 984
Query: 1038 KRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
KR S G D +++KN++ FDE++SQ +E +S + Q+ K+IFMDKH
Sbjct: 985 KRGSKVGSGDQSHSKNNMDA---FDENVSQ-NEHNESVDDIQSGKQIFMDKH 1032
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 165/422 (39%), Positives = 228/422 (54%), Gaps = 35/422 (8%)
Query: 1087 DKH-TQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRKNN 1145
+KH TQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQ+ L+DDA QE SK K+ K +
Sbjct: 1103 NKHETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQTSELLDDAVQEGSKRGKRSKES 1162
Query: 1146 GLENGNNRSQKAPKKAEESVSGAQNNMEKSSQSQSRERKVLEKFVLAEMENPERLTPA-- 1203
+ N + + + N K++ QSR R++ K V ++ E+ E A
Sbjct: 1163 PSKLDNKQEIPINEIGSTAARNGSNATAKTTPKQSRRRRI-RKPVPSDGESAEPPVQAGQ 1221
Query: 1204 ------GGGRNANNVFRGNRRGKGQRVGRGRGRRRLCAEQSETSSSDDIGSDDTQEYYSE 1257
G +N R RG + GR R + +E S TSSS D S + +E ++
Sbjct: 1222 KQCNDTGSSKNGRGKGRKKGRGVRRGRGRSRIQENPGSEISGTSSS-DCNSGNEEEVPAQ 1280
Query: 1258 KFEGQQEVRRSTRSRKPVDYNVDDPEIADVGKIL--SNKESSNEE----EAKQDSVHGVT 1311
K +G EVRRS R RK V+Y DD EI D GK L N++ +NEE E +D + +
Sbjct: 1281 KLDGSNEVRRSKRPRKAVNYANDDLEIDDEGKSLDQGNQKCTNEEAVELEPSRDQI--IC 1338
Query: 1312 GEASADYSRKKQHRADDPS----IDKDYIERGGGFCIDDQEIGQPSVSPCDDPFLEAEIT 1367
G+A+AD+S K Q +A+D S + DY E G C+D+ EIGQ S DDP E +
Sbjct: 1339 GDAAADFSGKNQQKAEDSSPGEDLCGDYPETEGVMCMDENEIGQLD-SRDDDPTFADEFS 1397
Query: 1368 KDYMKMGGGFCHDESETREDQVA-AKDPVVTGESPSTCFDSSDGVHCDVGLGDSTTSSNS 1426
+DY+KMGGGFC +E E +D A DP T +++ D ++ + + + S+
Sbjct: 1398 EDYLKMGGGFCVEEDEKDKDHNARTYDPA----KADTIYENPD-PESELAIHPAESVSSL 1452
Query: 1427 KEATNGLENVGRTDTFDTEPNPVVQNAT----STDSARNDAGRASRGSLTAMTFLRRKRR 1482
+ G ++ T DTE N NAT ++ +D G + +L AM FLR+KRR
Sbjct: 1453 QNTAGGFQS-EPTCQPDTELNLDCPNATIGLSMPENTGDDTGTNTVKALRAMPFLRKKRR 1511
Query: 1483 RS 1484
S
Sbjct: 1512 LS 1513
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 80/120 (66%), Gaps = 9/120 (7%)
Query: 1 MRLKELALDLENQRQIQKRDPEGKKVLS-DMENCSERTDG---VSASDDKENLDEMLAAS 56
MRLKELA DLENQR + D +GKKVLS E E ++G VS + ++E LDEMLAAS
Sbjct: 117 MRLKELAKDLENQR-LNNND-KGKKVLSYQTETAGEVSEGNSSVSGTYNQEKLDEMLAAS 174
Query: 57 IAAEANESSSKSASKSATANLLEEDGDEDEEIILPTMGGNVDPAVFAALPPSMQHQLLVR 116
+AAE + + +N ++D DEDEE++LP M G VDPAV AALPPSMQ LLV+
Sbjct: 175 LAAEED---GNFVGDAGISNEEDDDDDEDEEMMLPIMNGKVDPAVLAALPPSMQLDLLVQ 231
>gi|356498232|ref|XP_003517957.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein UVH3-like [Glycine
max]
Length = 1707
Score = 759 bits (1960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/1168 (45%), Positives = 686/1168 (58%), Gaps = 145/1168 (12%)
Query: 1 MRLKELALDLENQRQIQKRDPEGKK-------VLSDM-------------ENCSERTDG- 39
+RLKELA DL+NQR + D +G+K V SD+ + + DG
Sbjct: 117 LRLKELADDLKNQRMKKNSDTKGQKKSNQKDFVGSDLGGSHVKELDEMSVAKYAAKEDGN 176
Query: 40 -----VSASDDKENLDEMLAASIAAEANESSSKSASKSATANLLEEDGDEDEEIILPTMG 94
+ + ++E L EMLAASIAAE N ++ S N LEE+ D DE+IILP++
Sbjct: 177 SSQATILTTYNQEELHEMLAASIAAEKNGIHARKGMPSIVINPLEEERDADEQIILPSVN 236
Query: 95 GNVDPAVFAALPPSMQHQLLVR---------------------NNDAKGKNVLSDDLGQA 133
VD AV AALP SMQ +L + N KGK +L L +A
Sbjct: 237 AEVDMAVLAALPQSMQLDILAQLKGKKTEGLVKEVDNQNQHDVNYRGKGKGIL---LIEA 293
Query: 134 DTVGISPESHDVVSKSRDHKKLDEMLAASIAAEEDGSLSNNASAS--AASLPLEEEDGDE 191
D VG S +V S+S + +DEMLAASIA EE+ L NN S S A+++ EE D DE
Sbjct: 294 DMVGCSSRHDNVTSRSDNQHSIDEMLAASIAMEENEELVNNTSTSVGASAIEEEEVDYDE 353
Query: 192 DEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQI 251
DEEMILPAM G +DPAVLA+LPPSMQLDLLVQMRE+L+AENRQKYQKVKK P KFSELQI
Sbjct: 354 DEEMILPAMHGKIDPAVLASLPPSMQLDLLVQMRERLIAENRQKYQKVKKDPAKFSELQI 413
Query: 252 QAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVE 311
QAYLKTVAFRR+IDEVQKAAA GV GVQTSRIASEANRE+IFSSSFTGDKQ LTS+ +E
Sbjct: 414 QAYLKTVAFRRDIDEVQKAAAVGGVGGVQTSRIASEANREYIFSSSFTGDKQELTSTSLE 473
Query: 312 GKKDEQQQIPSEHPVSDSANNGASIDKSNFSSTDQSNSVTKLGPEESRKSFADDVETYLD 371
KD QQ++ HP S N SI N SN+ + L E + + ++TYLD
Sbjct: 474 KNKDTQQKVQGVHP---SQNLTDSIVAGN-----DSNTSSGLVHNEPGEPADESIQTYLD 525
Query: 372 ERGRVRLSKVRAMGIRMTRDLQRNLEMMKEIEQERPNGNNITGAGSMLTLNETGTSKAVP 431
ERGR R+S++RAMG+RMT D+QRNL+++KEIEQER N G++ G +
Sbjct: 526 ERGRFRVSRLRAMGMRMTCDIQRNLDLLKEIEQERAYVNKAANIGTVENAENNGPYE--- 582
Query: 432 SEKRKFIGTSLDDTNESVSSIERNKQSTLKSGISLELSFKDNSENN-CDDDDDIFAHLAA 490
S + +G S + + V +N+Q+ L +E+SF+ + +N +D+DDIF+ L
Sbjct: 583 SSGIQLVGKSQEMNVDLVGQNMQNEQTMLDRDTLIEISFEYDCKNKFANDEDDIFSSLVG 642
Query: 491 GKPV-IFPNSPRAHS---SISVSDSDWEEGTTERKGSSLSDDANAGINPPLNLEEGGISD 546
G PV IF A + S S SD DWEEG E K ++ + + ++ + ++
Sbjct: 643 GNPVAIFGADDTAATEQPSHSDSDCDWEEGILEGKSNAYPEHDVVELKS--SVADDHKNN 700
Query: 547 ESEVEWEEGPSCAPKSSLSFPAESEKTVSN--IEEEANLQEAIRRSLLDV------CIEK 598
E EVEWEEG S+L S K S +EEE++LQEAIRRSL + C+
Sbjct: 701 EREVEWEEGDCDGANSTLL----SGKLASQGWLEEESDLQEAIRRSLESIGDMKLKCMP- 755
Query: 599 PNYALSEHNKCENLGENACDGTWLYDRENNMDDPNFLGESV----------SQQHESICE 648
A+ EH+ N EN D + + DP L ++V S + + E
Sbjct: 756 ---AVDEHS---NTYENKLDCGLEHGDDLYYSDPVDLNDNVGFLNNKNREDSTEKNELHE 809
Query: 649 YVDGLGKLDTVGGINNSEVIGSLGRELKLYEPRNSDEKEMLINKPFEKDNSYFEQSRQGA 708
DG K D V G NN + G + K NS+ E+LI+ P D+
Sbjct: 810 IEDGDKKHDFVSG-NNEQTFHFHGSQSKSSVTFNSNNTEILIDTPCRMDS---------- 858
Query: 709 NDGANDGRSLCSDAPCEDSGTTMELTEVQLVKGRCLSASAKGDEHLTHEDKKNN--CEAE 766
S D+ + + T +L V +V + L H+D K + C+
Sbjct: 859 -------HSCFVDSISDTNVMTKDL--VPMVAEQLLDK---------HDDGKVSFYCDNT 900
Query: 767 TSVLPGD-----KKNEIEVEMKHDFTAEPSCRTVGTSDTSIPLVKTSGNASIYDTDIEQK 821
+ V P KKN I+ +EP + T+ +I LV++S S D DIE K
Sbjct: 901 SKVDPVGATEEGKKNYIQ-------ESEPLSNSTDTTKPAI-LVESSLKGSTEDLDIEPK 952
Query: 822 SAEERTPDTYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLE 881
E + + ++ + G + A A E LEEEMQIL EY+ L +EQ+KLE
Sbjct: 953 LPSEDSNRNFYEERNSSLGNDVVNTPGHFPAHAAEVSLEEEMQILGQEYINLENEQRKLE 1012
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
RNAESV+SE+F ECQELLQMFGLPYIIAPMEAEAQCAY+EL LVDGVVTDDSDV LFGA
Sbjct: 1013 RNAESVNSELFTECQELLQMFGLPYIIAPMEAEAQCAYLELEKLVDGVVTDDSDVLLFGA 1072
Query: 942 RSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
RSVYKNIFDDRKYVETYFM+DIEK+LGLTREKLIRMALLLGSDYTEG+SGIGIVNAIEVV
Sbjct: 1073 RSVYKNIFDDRKYVETYFMEDIEKELGLTREKLIRMALLLGSDYTEGVSGIGIVNAIEVV 1132
Query: 1002 NAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEF 1061
NAFPEEDGL KFR+W+ESPDPTILG+ D +G++SRK+ S +K +N + +V S
Sbjct: 1133 NAFPEEDGLLKFRQWVESPDPTILGRLDANSGSNSRKKGSKIEEK-MNSSSCNVKE-SAV 1190
Query: 1062 DESISQFDEDKQSAEYSQNMKKIFMDKH 1089
++I E + ++Y Q +K+ F +KH
Sbjct: 1191 MQNICHAQEQNELSDYIQEIKQTFFNKH 1218
Score = 141 bits (356), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 211/437 (48%), Gaps = 59/437 (13%)
Query: 1083 KIFMDKHTQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKR 1142
K + + TQLRLEAFY FNERFAKIRSKRIKKAVKGITG Q L+DD+ +E SKSRK
Sbjct: 1292 KEYNKRETQLRLEAFYNFNERFAKIRSKRIKKAVKGITGKQPSDLIDDSAEEFSKSRKTG 1351
Query: 1143 K---------NNGLEN---GNNRSQKAPKKAEESVSGAQNNMEK-----SSQSQSRERKV 1185
+ + G+E G +S+ + ++V+ Q+ +K SS + E +
Sbjct: 1352 REPEDITLETSRGIEGNLEGRRKSKIKQSRKNDTVAKEQSKKKKVNDDPSSAPGTSEIEN 1411
Query: 1186 LEKFVLAEMENPERLTPAGGGRNANNVFRGNRRGKGQRVGRGRGRRRLCAEQSETSSSDD 1245
L+ + E E + G+ G RG+ + RGR + L + ET +S
Sbjct: 1412 LQPSLQIEEEQHD-------GKALIRNRSGRGRGRIMGIKRGRDNKGLSFQSCETEASS- 1463
Query: 1246 IGSDDTQEYYSEKFEGQ--QEVRRSTRSRKPVDYNVDDPEIADVGKILSNKESSNEEEAK 1303
GS D ++ + ++VRRS RSRKPV+Y+ +PE D + + E
Sbjct: 1464 -GSSDIDDHGPRVHVDRVPKDVRRSMRSRKPVNYSFKEPEDEDSDDSFDRRNQTGPIEEN 1522
Query: 1304 QDSVHGVTGEASADYSRKKQHRA----DDPSIDKDYIERGGGFCIDDQEIGQPSVSPCDD 1359
+ G + + D+S K+ A + ++ D +E GG FC D E P D
Sbjct: 1523 LSHILGACEDGATDFSMAKECSAMNFPPEENLPTDSLESGGWFCTDAGETCHPGTGNQDS 1582
Query: 1360 PFLEAEITKDYMKMGGGFCHDESETREDQVAAKDPVVTGESPSTCFDSSDGVHCDVGLGD 1419
+ DY+KMGGGFC D+ +T Q + D V T + D D
Sbjct: 1583 -------SDDYLKMGGGFCLDDGDTGVKQDTS-DNVDTATVDYNADFPHGSDYLDETNRD 1634
Query: 1420 STTS----SNSKEATNGLENVGRTDTFDTEPNPVVQNATSTDSA----------RNDAGR 1465
++S S +++ NG++ G F+ EPN + +A+S D + RN++G
Sbjct: 1635 KSSSDILFSGAEKPENGIQGGG---PFNIEPNDLA-SASSYDHSDIAVLKQENTRNNSG- 1689
Query: 1466 ASRGSLTAMTFLRRKRR 1482
AS G+ +AM FL+R+R+
Sbjct: 1690 ASTGAFSAMPFLKRRRK 1706
>gi|297815070|ref|XP_002875418.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321256|gb|EFH51677.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1463
Score = 754 bits (1946), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/1349 (41%), Positives = 766/1349 (56%), Gaps = 208/1349 (15%)
Query: 118 NDAKGKNVL--SDDLGQADTVGISPESHDVVSKSRDHK-KLDEMLAASIAAEEDGSLSNN 174
+D KGK VL DDL D S D + +D++ KLDEMLAAS+AAEE+G+ ++
Sbjct: 185 DDPKGKGVLLDGDDL---DNKMKSNLEQDSSVQGKDYQEKLDEMLAASLAAEEEGNFTSK 241
Query: 175 ASASAASLPLEEEDGDEDEE----MILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMA 230
AS SAA++P EEED DED + ++LP M GN+DPAVLA+LPPSMQLDLLVQMRE+LMA
Sbjct: 242 ASTSAAAIPSEEEDEDEDSDEDEEILLPVMDGNIDPAVLASLPPSMQLDLLVQMREKLMA 301
Query: 231 ENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANR 290
ENRQKYQKVKKAPEKFSELQI+AYLKTVAFRREI+EVQ++A GR V GVQTSRIASEANR
Sbjct: 302 ENRQKYQKVKKAPEKFSELQIEAYLKTVAFRREINEVQRSAGGRAVGGVQTSRIASEANR 361
Query: 291 EFIFSSSFTGDKQVLTSSRVEGKKDEQQQIPSEHPVSDSANNGASIDKSNFSSTDQSNSV 350
EFIFSSSF GDK+ L S+R EG+ DE Q+ S+ + N +S+ KS+ +
Sbjct: 362 EFIFSSSFAGDKEELASAR-EGRNDENQKKTSQQSLPVPVKNASSVKKSD--------AT 412
Query: 351 TKLGPEESRKSFADDVETYLDERGRVRLSKVRAMGIRMTRDLQRNLEMMKEIEQERPNGN 410
+L +E K+ +++E Y+DERGR R+ + R MGI+MTRD+QRNL +MKE E+
Sbjct: 413 IELDRDEP-KNPDENIEVYIDERGRFRI-RNRHMGIQMTRDIQRNLHLMKEKER------ 464
Query: 411 NITGAGSMLTLNETGTS-KAVPSEKRKFIGTSLDDTNESVSSIE-RNKQSTLKSGISLEL 468
T +GSM +ET ++ + P+E +F+ S E V ++E +N S L++ S+E+
Sbjct: 465 --TASGSMANNDETFSAWENFPTED-QFLEKS--PVEEDVVNLEIQNDDSMLQNPSSIEI 519
Query: 469 SF-KDNSENNCDDDDDIFAHLAAGKPVIFP---NSPRAHSSISVSDSDWEEGTTERKGSS 524
SF D + +D+DD+F LAAG PV N P+ SS SDSDWEE E + +S
Sbjct: 520 SFDHDGGGKDLNDEDDMFLQLAAGGPVTISSTENDPKEDSSPWASDSDWEEVPVE-QNTS 578
Query: 525 LS----DDANAGINPPLNLEEGGISDESEVEWEEGPSCAPKSSLSFPAESEKTVSNIEEE 580
LS + +N I ++++EG V WEE SS+ ++ T +EEE
Sbjct: 579 LSKLEANLSNQHIPKDISIDEG-------VAWEEYSCENANSSMENDTVTKITKGYLEEE 631
Query: 581 ANLQEAIRRSLLDVCIEKPNYALSEHNKCE-NLGENACDGTWLYDRENNMDDPNFLGESV 639
A+LQEAI++SLL++ ++ L E+ NL + L RE V
Sbjct: 632 ADLQEAIKKSLLELHDKESGDVLEENQSVRVNLVVDKPSEDSLCSRET----------VV 681
Query: 640 SQQHESICEYVDGLGKLDTVGGI---NNSEVIGS------LGRELKLYEPRNSDEKEMLI 690
+ E ++D + L T G I +N+ V G+ + ++ + S+ +
Sbjct: 682 EAEEEG---FLDEITILKTSGAIREQSNTSVAGNADGQKGITKQFGTHPSSGSNNVSRAV 738
Query: 691 NKPFEKDNSYFEQSRQGANDGANDGRSLCSDAPCEDSGTTMELTEVQLVKGRCLSASAKG 750
+ K S S + A + A+ R L + A + E +E + +SA+
Sbjct: 739 SNELSKVKSVI--SPEKALNVASQSRMLSTMAKQHNE----EGSESFGGESVKVSATPIA 792
Query: 751 DEHLT-HEDKKNNCEAETSVLPGDKKNEIEVEMKHDFTAEPSCRTVGTS-DTSIPLVKTS 808
DE T +K N + E+S++ K D++ V S D S+ +V+ S
Sbjct: 793 DEERTGFLGEKGNADGESSIMM----------YKRDYSRRKIQSLVTESRDPSLDVVR-S 841
Query: 809 GNASIYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQILDH 868
++DTD + + +EE + + + +T F K+ V E +E +EEE+++LD
Sbjct: 842 QIGILHDTDSQNERSEENNSNEHTFNIDSSTD-FEEKS---VPVEFSEANIEEEIRVLDQ 897
Query: 869 EYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDG 928
E++ LGDEQ+KLERNAESVSSEMFAECQELLQ+FG+PYIIAPMEAEAQCA+ME +NLVDG
Sbjct: 898 EFVSLGDEQRKLERNAESVSSEMFAECQELLQIFGIPYIIAPMEAEAQCAFMEQSNLVDG 957
Query: 929 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEG 988
+VTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIEK+LGL+R+K+IRMA+LLGSDYTEG
Sbjct: 958 IVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIEKELGLSRDKIIRMAMLLGSDYTEG 1017
Query: 989 ISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRR------SS 1042
ISGIGIVNAIEVV AFPEEDGL KFREW+ESPDPTILG + G+ S + S+
Sbjct: 1018 ISGIGIVNAIEVVTAFPEEDGLHKFREWVESPDPTILGLKIKKRGSGSVDNKGIISGAST 1077
Query: 1043 DGDKDVN---------YAKN--------SVGGVSEF-----DESISQFDEDKQSA----- 1075
D +++ +KN S +S + D S +F K
Sbjct: 1078 DDTEEIKQIFMDQHRKVSKNWHIPSTFPSEAVISAYLNPQVDRSTEKFSWGKPDLSVLRK 1137
Query: 1076 ----EYSQNMKKI----------FMDKHTQLRLEAFYTFNERFAKIRSKRIKKAVKGITG 1121
+++ N KK + + TQLR+EAFY+FNERFAKIRSKRI KAVKGI G
Sbjct: 1138 LCWEKFNWNSKKTDDLLLPVLKEYEKRETQLRMEAFYSFNERFAKIRSKRINKAVKGIGG 1197
Query: 1122 SQSLLLMDDAGQEVSKSRKKRKNNGLENGNNR-SQKAPKKAEESVSGAQNNMEKSSQSQS 1180
S + D QE + R K++ E +N S K KA E V + +EK S S
Sbjct: 1198 GLSSEVADSTLQEGPRKRNKKRVAPHETEDNTTSDKDSPKANEKVKNKRKRLEKPSSS-- 1255
Query: 1181 RERKVLEKFVLAEMENPERLTPAGGGRNANNVFRGNRRGKGQRVGRGRGRRRLCAEQSET 1240
RG RG+ Q+ GRGR ++ L
Sbjct: 1256 ---------------------------------RG--RGRAQKRGRGRVQKDLLE----- 1275
Query: 1241 SSSDDIGSDDTQEYYSEKFEGQ-QEVRRSTRSRKPVDYNVDDPEIADVGKILSNKESSNE 1299
SD T + + E + +++STRSR PV YN + + D + SN ES +E
Sbjct: 1276 ------LSDGTSDDDDKDLEAKPSNLQKSTRSRNPVKYNAKEDDELDESR--SNGESLSE 1327
Query: 1300 EEAKQDSVHGVTGEASADYSRKKQHRADDPSIDKDYIERGGGFCIDD-QEIGQPSVSPCD 1358
+ D G G S + ++K+ D PS +DYI+ GGGFC + EIG
Sbjct: 1328 HFEEVD--EGRIGNVSEERTQKEASINDCPS--EDYIQTGGGFCAGEADEIG-------- 1375
Query: 1359 DPFLEAEITKDYMKMGGGFCHDESETRED 1387
D L+ + T DY +GGGFC DE ET E+
Sbjct: 1376 DAHLKDKATDDYRVIGGGFCVDEDETAEE 1404
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 72/115 (62%), Gaps = 12/115 (10%)
Query: 14 RQIQKRDPEGKKVLSD-------MENCSERTDGVSASDDKENLDEMLAASIAAEANESSS 66
+++ K DP+GK VL D M++ E+ V D +E LDEMLAAS+AAE + +
Sbjct: 180 KELTKDDPKGKGVLLDGDDLDNKMKSNLEQDSSVQGKDYQEKLDEMLAASLAAEEEGNFT 239
Query: 67 KSASKSATA-----NLLEEDGDEDEEIILPTMGGNVDPAVFAALPPSMQHQLLVR 116
AS SA A +ED DEDEEI+LP M GN+DPAV A+LPPSMQ LLV+
Sbjct: 240 SKASTSAAAIPSEEEDEDEDSDEDEEILLPVMDGNIDPAVLASLPPSMQLDLLVQ 294
>gi|18405624|ref|NP_566830.1| DNA repair protein UVH3 [Arabidopsis thaliana]
gi|56749787|sp|Q9ATY5.1|UVH3_ARATH RecName: Full=DNA repair protein UVH3; AltName: Full=ERCC5 homolog;
AltName: Full=RAD2 homolog; Short=AtRAD2; Short=AtUVH3;
Short=AtXPG; AltName: Full=UV hypersensitive protein 3;
AltName: Full=XPG homolog
gi|13649704|gb|AAK37472.1| UV hypersensitive protein [Arabidopsis thaliana]
gi|332643872|gb|AEE77393.1| DNA repair protein UVH3 [Arabidopsis thaliana]
Length = 1479
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/966 (45%), Positives = 600/966 (62%), Gaps = 108/966 (11%)
Query: 152 HKKLDEMLAASIAAEEDGSLSNNASASAASLPLEEEDGDEDEE---MILPAMTGNVDPAV 208
+KLDEMLAAS+AAEE+ + ++ AS SAA++P EE++ ++ + ++LP M GN+DPAV
Sbjct: 224 QEKLDEMLAASLAAEEERNFTSKASTSAAAIPSEEDEEEDSDGDEEILLPVMDGNIDPAV 283
Query: 209 LAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQ 268
LA+LPPSMQLDLL QMRE+LMAENRQKYQKVKKAPEKFSELQI+AYLKTVAFRREI+EVQ
Sbjct: 284 LASLPPSMQLDLLAQMREKLMAENRQKYQKVKKAPEKFSELQIEAYLKTVAFRREINEVQ 343
Query: 269 KAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVEGKKDEQQQIPSEHPVSD 328
++A GR V GVQTSRIASEANREFIFSSSF GDK+VL S+R EG+ DE Q+ S+ +
Sbjct: 344 RSAGGRAVGGVQTSRIASEANREFIFSSSFAGDKEVLASAR-EGRNDENQKKTSQQSLPV 402
Query: 329 SANNGASIDKSNFSSTDQSNSVTKLGPEESRKSFADDVETYLDERGRVRLSKVRAMGIRM 388
S N + + KS+ + +L +E K+ +++E Y+DERGR R+ + R MGI+M
Sbjct: 403 SVKNASPLKKSD--------ATIELDRDEP-KNPDENIEVYIDERGRFRI-RNRHMGIQM 452
Query: 389 TRDLQRNLEMMKEIEQERPNGNNITGAGSMLTLNETGTS-KAVPSEKRKFIGTSLDDTNE 447
TRD+QRNL +MKE E+ T +GSM +ET ++ + P+E +F+ S +
Sbjct: 453 TRDIQRNLHLMKEKER--------TASGSMAKNDETFSAWENFPTED-QFLEKS--PVEK 501
Query: 448 SVSSIE-RNKQSTLKSGISLELSF-KDNSENNCDDDDDIFAHLAAGKPVIFP---NSPRA 502
V +E +N S L S+E+SF D + +D+DD+F LAAG PV N P+
Sbjct: 502 DVVDLEIQNDDSMLHPPSSIEISFDHDGGGKDLNDEDDMFLQLAAGGPVTISSTENDPKE 561
Query: 503 HSSISVSDSDWEEGTTERKGSSLSDDANAG---INPPLNLEEGGISDESEVEWEEGPSCA 559
+S SDSDWEE E+ S +AN I +++ EG V WEE
Sbjct: 562 DTSPWASDSDWEEVPVEQNTSVSKLEANLSNQHIPKDISIAEG-------VAWEEYSCKN 614
Query: 560 PKSSLSFPAESEKTVSNIEEEANLQEAIRRSLLDVCIEKPNYALSEHNKCE-NLGENACD 618
+S+ ++ T +EEEA+LQEAI++SLL++ ++ L E+ NL +
Sbjct: 615 ANNSVENDTVTKITKGYLEEEADLQEAIKKSLLELHDKESGDVLEENQSVRVNLVVDKPS 674
Query: 619 GTWLYDRENNMDDPNFLGESVSQQHESICEYVDGLGKLDTVGGIN---NSEVIGS----- 670
L RE +GE+ ++ ++D + L T G I+ N+ V G+
Sbjct: 675 EDSLCSRET-------VGEAEEER------FLDEITILKTSGAISEQSNTSVAGNADGQK 721
Query: 671 -LGRELKLYEPRNSDEKEMLINKPFEKDNSYFEQSRQGANDGANDGRSLCSDAPCEDSGT 729
+ ++ + S+ ++ K S S + A + A+ R L + A +
Sbjct: 722 GITKQFGTHPSSGSNNVSHAVSNKLSKVKSVI--SPEKALNVASQNRMLSTMAKQHNE-- 777
Query: 730 TMELTEVQLVKGRCLSASAKGDEHLT-HEDKKNNCEAETSVLPGDKKNEIEVEMKHDFTA 788
E +E + +SA DE +T D+K+N + E+S++ DK++ +++ T
Sbjct: 778 --EGSESFGGESVKVSAMPIADEEITGFLDEKDNADGESSIMMDDKRDYSRRKIQSLVTE 835
Query: 789 --EPSCRTVGTSDTSIPLVKTSGNASIYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKA 846
+PS R V S I ++DTD + + EE + + + +T F K
Sbjct: 836 SRDPS-RNVVRSRIGI----------LHDTDSQNERREENNSNEHTFNIDSSTD-FEEKG 883
Query: 847 IENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPY 906
V E +E +EEE+++LD E++ LGDEQ+KLERNAESVSSEMFAECQELLQ+FG+PY
Sbjct: 884 ---VPVEFSEANIEEEIRVLDQEFVSLGDEQRKLERNAESVSSEMFAECQELLQIFGIPY 940
Query: 907 IIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKD 966
IIAPMEAEAQCA+ME +NLVDG+VTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIEK+
Sbjct: 941 IIAPMEAEAQCAFMEQSNLVDGIVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIEKE 1000
Query: 967 LGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILG 1026
LGL+R+K+IRMA+LLGSDYTEGISGIGIVNAIEVV AFPEEDGL KFREW+ESPDPTILG
Sbjct: 1001 LGLSRDKIIRMAMLLGSDYTEGISGIGIVNAIEVVTAFPEEDGLQKFREWVESPDPTILG 1060
Query: 1027 KFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFM 1086
K D +TG+ +KR S+ D K + G S D ++ +K+IFM
Sbjct: 1061 KTDAKTGSKVKKRGSASVDN-----KGIISGASTDD---------------TEEIKQIFM 1100
Query: 1087 DKHTQL 1092
D+H ++
Sbjct: 1101 DQHRKV 1106
Score = 116 bits (290), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 151/319 (47%), Gaps = 62/319 (19%)
Query: 1072 KQSAEYSQNMKKIFMDKHTQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDA 1131
K++ E + K + + TQLR+EAFY+FNERFAKIRSKRI KAVKGI G S + D
Sbjct: 1160 KKTDELLLPVLKEYEKRETQLRIEAFYSFNERFAKIRSKRINKAVKGIGGGLSSDVADHT 1219
Query: 1132 GQEVSKSRKKRKNNGLEN-GNNRSQKAPKKAEESVSGAQNNMEKSSQSQSRERKVLEKFV 1190
QE + R K+K E NN S K A E V + +EK S S
Sbjct: 1220 LQEGPRKRNKKKVAPHETEDNNTSDKDSPIANEKVKNKRKRLEKPSSS------------ 1267
Query: 1191 LAEMENPERLTPAGGGRNANNVFRGNRRGKGQRVGRGRGR-RRLCAEQSETSSSDDIGSD 1249
RG RG+ Q+ GRGRGR ++ E S+ SS DD D
Sbjct: 1268 -----------------------RG--RGRAQKRGRGRGRVQKDLLELSDGSSDDDDDDD 1302
Query: 1250 DTQEYYSEKFEGQQEVRRSTRSRKPVDYNVDDPEIADVGKILSNKESSNEEEAKQDSVHG 1309
E ++ +++STRSR PV Y+ + + D + S N EE + +
Sbjct: 1303 KVVELEAKP----ANLQKSTRSRNPVMYSAKEDDELDESRSNEGSPSENFEEVDEGRI-- 1356
Query: 1310 VTGEASADYSRKKQHRADDPSIDKDYIERGGGFCIDD-QEIGQPSVSPCDDPFLEAEITK 1368
+ S D S D PS +DYI+ GGGFC D+ EIG D LE + T
Sbjct: 1357 -GNDDSVDASIN-----DCPS--EDYIQTGGGFCADEADEIG--------DAHLEDKATD 1400
Query: 1369 DYMKMGGGFCHDESETRED 1387
DY +GGGFC DE ET E+
Sbjct: 1401 DYRVIGGGFCVDEDETAEE 1419
Score = 67.0 bits (162), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 40 VSASDDKENLDEMLAASIAAEANESSSKSASKSATA----NLLEEDGDEDEEIILPTMGG 95
V D +E LDEMLAAS+AAE + + AS SA A EED D DEEI+LP M G
Sbjct: 218 VQGKDYQEKLDEMLAASLAAEEERNFTSKASTSAAAIPSEEDEEEDSDGDEEILLPVMDG 277
Query: 96 NVDPAVFAALPPSMQHQLLVR 116
N+DPAV A+LPPSMQ LL +
Sbjct: 278 NIDPAVLASLPPSMQLDLLAQ 298
>gi|11994123|dbj|BAB01125.1| unnamed protein product [Arabidopsis thaliana]
Length = 1522
Score = 669 bits (1725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/966 (45%), Positives = 600/966 (62%), Gaps = 108/966 (11%)
Query: 152 HKKLDEMLAASIAAEEDGSLSNNASASAASLPLEEEDGDEDEE---MILPAMTGNVDPAV 208
+KLDEMLAAS+AAEE+ + ++ AS SAA++P EE++ ++ + ++LP M GN+DPAV
Sbjct: 264 QEKLDEMLAASLAAEEERNFTSKASTSAAAIPSEEDEEEDSDGDEEILLPVMDGNIDPAV 323
Query: 209 LAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQ 268
LA+LPPSMQLDLL QMRE+LMAENRQKYQKVKKAPEKFSELQI+AYLKTVAFRREI+EVQ
Sbjct: 324 LASLPPSMQLDLLAQMREKLMAENRQKYQKVKKAPEKFSELQIEAYLKTVAFRREINEVQ 383
Query: 269 KAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVEGKKDEQQQIPSEHPVSD 328
++A GR V GVQTSRIASEANREFIFSSSF GDK+VL S+R EG+ DE Q+ S+ +
Sbjct: 384 RSAGGRAVGGVQTSRIASEANREFIFSSSFAGDKEVLASAR-EGRNDENQKKTSQQSLPV 442
Query: 329 SANNGASIDKSNFSSTDQSNSVTKLGPEESRKSFADDVETYLDERGRVRLSKVRAMGIRM 388
S N + + KS+ + +L +E K+ +++E Y+DERGR R+ + R MGI+M
Sbjct: 443 SVKNASPLKKSD--------ATIELDRDEP-KNPDENIEVYIDERGRFRI-RNRHMGIQM 492
Query: 389 TRDLQRNLEMMKEIEQERPNGNNITGAGSMLTLNETGTS-KAVPSEKRKFIGTSLDDTNE 447
TRD+QRNL +MKE E+ T +GSM +ET ++ + P+E +F+ S +
Sbjct: 493 TRDIQRNLHLMKEKER--------TASGSMAKNDETFSAWENFPTED-QFLEKS--PVEK 541
Query: 448 SVSSIE-RNKQSTLKSGISLELSF-KDNSENNCDDDDDIFAHLAAGKPVIFP---NSPRA 502
V +E +N S L S+E+SF D + +D+DD+F LAAG PV N P+
Sbjct: 542 DVVDLEIQNDDSMLHPPSSIEISFDHDGGGKDLNDEDDMFLQLAAGGPVTISSTENDPKE 601
Query: 503 HSSISVSDSDWEEGTTERKGSSLSDDANAG---INPPLNLEEGGISDESEVEWEEGPSCA 559
+S SDSDWEE E+ S +AN I +++ EG V WEE
Sbjct: 602 DTSPWASDSDWEEVPVEQNTSVSKLEANLSNQHIPKDISIAEG-------VAWEEYSCKN 654
Query: 560 PKSSLSFPAESEKTVSNIEEEANLQEAIRRSLLDVCIEKPNYALSEHNKCE-NLGENACD 618
+S+ ++ T +EEEA+LQEAI++SLL++ ++ L E+ NL +
Sbjct: 655 ANNSVENDTVTKITKGYLEEEADLQEAIKKSLLELHDKESGDVLEENQSVRVNLVVDKPS 714
Query: 619 GTWLYDRENNMDDPNFLGESVSQQHESICEYVDGLGKLDTVGGIN---NSEVIGS----- 670
L RE +GE+ ++ ++D + L T G I+ N+ V G+
Sbjct: 715 EDSLCSRET-------VGEAEEER------FLDEITILKTSGAISEQSNTSVAGNADGQK 761
Query: 671 -LGRELKLYEPRNSDEKEMLINKPFEKDNSYFEQSRQGANDGANDGRSLCSDAPCEDSGT 729
+ ++ + S+ ++ K S S + A + A+ R L + A +
Sbjct: 762 GITKQFGTHPSSGSNNVSHAVSNKLSKVKSVI--SPEKALNVASQNRMLSTMAKQHNE-- 817
Query: 730 TMELTEVQLVKGRCLSASAKGDEHLT-HEDKKNNCEAETSVLPGDKKNEIEVEMKHDFTA 788
E +E + +SA DE +T D+K+N + E+S++ DK++ +++ T
Sbjct: 818 --EGSESFGGESVKVSAMPIADEEITGFLDEKDNADGESSIMMDDKRDYSRRKIQSLVTE 875
Query: 789 --EPSCRTVGTSDTSIPLVKTSGNASIYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKA 846
+PS R V S I ++DTD + + EE + + + +T F K
Sbjct: 876 SRDPS-RNVVRSRIGI----------LHDTDSQNERREENNSNEHTFNIDSSTD-FEEKG 923
Query: 847 IENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPY 906
V E +E +EEE+++LD E++ LGDEQ+KLERNAESVSSEMFAECQELLQ+FG+PY
Sbjct: 924 ---VPVEFSEANIEEEIRVLDQEFVSLGDEQRKLERNAESVSSEMFAECQELLQIFGIPY 980
Query: 907 IIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKD 966
IIAPMEAEAQCA+ME +NLVDG+VTDDSDVFLFGARSVYKNIFDDRKYVETYFM+DIEK+
Sbjct: 981 IIAPMEAEAQCAFMEQSNLVDGIVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIEKE 1040
Query: 967 LGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILG 1026
LGL+R+K+IRMA+LLGSDYTEGISGIGIVNAIEVV AFPEEDGL KFREW+ESPDPTILG
Sbjct: 1041 LGLSRDKIIRMAMLLGSDYTEGISGIGIVNAIEVVTAFPEEDGLQKFREWVESPDPTILG 1100
Query: 1027 KFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFM 1086
K D +TG+ +KR S+ D K + G S D ++ +K+IFM
Sbjct: 1101 KTDAKTGSKVKKRGSASVDN-----KGIISGASTDD---------------TEEIKQIFM 1140
Query: 1087 DKHTQL 1092
D+H ++
Sbjct: 1141 DQHRKV 1146
Score = 122 bits (306), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/319 (37%), Positives = 153/319 (47%), Gaps = 59/319 (18%)
Query: 1072 KQSAEYSQNMKKIFMDKHTQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDA 1131
K++ E + K + + TQLR+EAFY+FNERFAKIRSKRI KAVKGI G S + D
Sbjct: 1200 KKTDELLLPVLKEYEKRETQLRIEAFYSFNERFAKIRSKRINKAVKGIGGGLSSDVADHT 1259
Query: 1132 GQEVSKSRKKRKNNGLEN-GNNRSQKAPKKAEESVSGAQNNMEKSSQSQSRERKVLEKFV 1190
QE + R K+K E NN S K A E V + +EK S S
Sbjct: 1260 LQEGPRKRNKKKVAPHETEDNNTSDKDSPIANEKVKNKRKRLEKPSSS------------ 1307
Query: 1191 LAEMENPERLTPAGGGRNANNVFRGNRRGKGQRVGRGRGR-RRLCAEQSETSSSDDIGSD 1249
RG RG+ Q+ GRGRGR ++ E S+ SS DD D
Sbjct: 1308 -----------------------RG--RGRAQKRGRGRGRVQKDLLELSDGSSDDDDDDD 1342
Query: 1250 DTQEYYSEKFEGQQEVRRSTRSRKPVDYNVDDPEIADVGKILSNKESSNEEEAKQDSVHG 1309
E + K Q+VR+STRSR PV Y+ + + D + S N EE +
Sbjct: 1343 KVVELEA-KPANLQKVRKSTRSRNPVMYSAKEDDELDESRSNEGSPSENFEEVDEGR--- 1398
Query: 1310 VTGEASADYSRKKQHRADDPSIDKDYIERGGGFCIDD-QEIGQPSVSPCDDPFLEAEITK 1368
+ + S D S D PS +DYI+ GGGFC D+ EIG D LE + T
Sbjct: 1399 IGNDDSVDASIN-----DCPS--EDYIQTGGGFCADEADEIG--------DAHLEDKATD 1443
Query: 1369 DYMKMGGGFCHDESETRED 1387
DY +GGGFC DE ET E+
Sbjct: 1444 DYRVIGGGFCVDEDETAEE 1462
Score = 67.4 bits (163), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 40 VSASDDKENLDEMLAASIAAEANESSSKSASKSATA----NLLEEDGDEDEEIILPTMGG 95
V D +E LDEMLAAS+AAE + + AS SA A EED D DEEI+LP M G
Sbjct: 258 VQGKDYQEKLDEMLAASLAAEEERNFTSKASTSAAAIPSEEDEEEDSDGDEEILLPVMDG 317
Query: 96 NVDPAVFAALPPSMQHQLLVR 116
N+DPAV A+LPPSMQ LL +
Sbjct: 318 NIDPAVLASLPPSMQLDLLAQ 338
>gi|449446847|ref|XP_004141182.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
gi|449489542|ref|XP_004158342.1| PREDICTED: DNA repair protein UVH3-like [Cucumis sativus]
Length = 1541
Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/1103 (44%), Positives = 633/1103 (57%), Gaps = 156/1103 (14%)
Query: 1 MRLKELALDLENQRQIQKRDPEGKKVLSDMENCSERTDGVSASDDKENLDEMLAASIAAE 60
MRLKELA DL+NQ+Q +K++ K L + E+ DG S S E L ASI AE
Sbjct: 117 MRLKELAEDLQNQKQQRKQNLPKKSTLPSHK---EKFDGTSTS-------ERLGASIMAE 166
Query: 61 ANESSSKSASKSATANLLEEDGDEDEEIILPTMGGNVDPAVFAALPPSMQHQLLVRNNDA 120
SAS A A +ED DE + + ++ N D+
Sbjct: 167 EKGIFLSSASSFAGATHDKEDSDEQSTV-------------------NQKY-----NKDS 202
Query: 121 KGKNVLSDDLGQADTVGISPESHDVVSKSRDHKKLDEMLAASIAAEEDGSLSNNASASAA 180
KGK +LSD + VG E D+ S+S + LDEMLAASIAAEE SL+ AS SA
Sbjct: 203 KGKELLSD---ETHVVGSDSERMDLASRSAHQQNLDEMLAASIAAEEARSLNEKASTSAV 259
Query: 181 SLPLEEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVK 240
+ E+ DEDEE ILP M G VDP+VLAALPPS+QLDLLVQMRE+LMAENRQKYQ+VK
Sbjct: 260 TNLDGEDTDDEDEEFILPEMHGVVDPSVLAALPPSVQLDLLVQMRERLMAENRQKYQRVK 319
Query: 241 KAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTG 300
K P KFSELQIQAYLKTVAFRR+ID+VQKAAAGRGV GVQTSRIASEANREFIFSSSFTG
Sbjct: 320 KDPAKFSELQIQAYLKTVAFRRDIDQVQKAAAGRGVGGVQTSRIASEANREFIFSSSFTG 379
Query: 301 DKQVLTSSRVEGKKDEQQQIP-SEHPVSDSANNGASIDKSNFSSTDQSNSVTKLGPEESR 359
DKQ L S R E D+ Q P + P+S S+ + ST SNS+ + P++S
Sbjct: 380 DKQALASGRAEKNGDKDLQAPIVQQPLS-------SLKGTEIPST--SNSLARSTPDKS- 429
Query: 360 KSFADDVETYLDERGRVRLSKVRAMGIRMTRDLQRNLEMMKEIEQERPNGNNITGAGSML 419
+ + +++ET+LDERGRVR+S+VRAMG+ MTRDL+RNL++MKEIE+ T A
Sbjct: 430 EVYEENIETFLDERGRVRVSRVRAMGMHMTRDLERNLDLMKEIEKN-------TSAKKAT 482
Query: 420 TLNETGTSKAVPSEKRKFIGTSLDDTNESV-SSI----ERNKQSTLKSGISLELSFKDNS 474
+ + + F LD ++E V SI ER S L ++E+ +D
Sbjct: 483 NPDFMQNIQICDQQSFSFQSQVLDTSDEGVGGSINKLDERGTGSMLNEETAIEILLEDEG 542
Query: 475 ENNCDDDDDIFAHLAAGKPVIFPNSPRAHSSISV-SDSDWEEGTTERKGSSLSDDANAGI 533
+ D DDD+F++L A P+ + + +S+ S + +G T + DD
Sbjct: 543 GKSFDGDDDLFSNLVAENPIGMASFDISTQKLSLDSREEALDGKTYSPKTVGVDDH---- 598
Query: 534 NPPLNLEEGGISDESEVEWEEGPSCAPKSSLSFPAESEKTVS--NIEEEANLQEAIRRSL 591
+ +EG ISDESEV+WE+G C + + F A+ K+VS ++EEEA+LQEAIRRSL
Sbjct: 599 ----SFKEGTISDESEVDWEDG-VCDLVNPVPFEADLAKSVSKGSLEEEADLQEAIRRSL 653
Query: 592 LDVCIEKPNYALSEHNKCENLGENACDGTWLYDRENNMDDPNFLGESVSQQHESICEYVD 651
D K S+H + + P +G+ ++ E +
Sbjct: 654 EDKGYTKTGPLSSDHQQPQ---------------------PVIVGKKAEHYTSALKENMI 692
Query: 652 GLGKLDTVGG---INNSEVIGSLGRELKLYEPRNSDEKEMLINKPFEKDNSYFEQSRQGA 708
GLGKLD+ G +N ++ G+ G L + E +L++ + ++ +Q
Sbjct: 693 GLGKLDSDDGMSSLNFNDSSGTKGTTESLSQKMQCSEPVVLLDT---QTHTLSKQLDASY 749
Query: 709 NDGANDGRSLCSDAPCEDSGTTMELTEVQLVKGRCLSASAKGDEHLTHEDKKNNCEAETS 768
ND + L E++ T L+E EA +
Sbjct: 750 NDATFSPKEL-----NENNDTLEPLSE----------------------------EASGA 776
Query: 769 VLPGDKKNEIEVEMKHDFTAEPSCRTVGTSDTSIPLVKTSGNASIYDTDIEQKSAEERTP 828
V GD M ++ C V P +S + D ++Q +
Sbjct: 777 VQVGD--------MINNTVVNSPCHMVEMEGFYTPGNVSSPKSFACDNHLKQNLPVNKHS 828
Query: 829 DTYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVS 888
+ L D+K + I I + AE TE L + +L+ E + LGDEQK+LERNAESV+
Sbjct: 829 NDVLLDAK-DAKIPTVGKISS--AEITEDELIHRISVLEQERLNLGDEQKRLERNAESVN 885
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI
Sbjct: 886 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 945
Query: 949 FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEED 1008
FDDRKYVETYFM+DIE +LGL R+KLI+MALLLGSDYTEG+SGIGIVNA+EV+NAFPEED
Sbjct: 946 FDDRKYVETYFMKDIEHELGLNRDKLIQMALLLGSDYTEGVSGIGIVNAVEVMNAFPEED 1005
Query: 1009 GLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQF 1068
GL KF+EWIESPDP+ILG +TG ++ KR S + D NS G SE E+IS+
Sbjct: 1006 GLHKFKEWIESPDPSILGPLGAKTGLNAHKRGSKASENDTT-CSNSSGSASE--ENISK- 1061
Query: 1069 DEDKQSAEYSQNM--KKIFMDKH 1089
+ +NM K+ FM+KH
Sbjct: 1062 -------DLKENMAVKQSFMNKH 1077
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 202/426 (47%), Gaps = 64/426 (15%)
Query: 1088 KH-TQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRKNNG 1146
KH TQLRLEAFYTFNERFAKIRSKRIKKAVK ITGS+S +LMDDA ++ S + ++ +
Sbjct: 1149 KHETQLRLEAFYTFNERFAKIRSKRIKKAVKSITGSRSAVLMDDAVRDASVNNQRELS-- 1206
Query: 1147 LENGNNRSQKAPKKAEESVSGAQNNMEKSSQSQSRERKVLEKFVLAEMENPERLTPAGGG 1206
+E N S+K + + + S ++ E Q SR+R++ + +
Sbjct: 1207 VEPKENISEKCSSEIQGACSNEEDR-ENRLQKPSRKRQLDGE--------QSQFGKGKKL 1257
Query: 1207 RNANNVFRGNRRGKGQRVGRGRGR-----RRLCAEQSETSSSDDIGSDDTQEYYSEKFEG 1261
R R G + GRGRGR + + +ETSSSDD G D Q++ E +
Sbjct: 1258 RKKEKGKRSVSEGSHSKRGRGRGRLASRGKTPMTDLAETSSSDDDGEFDNQKFDLENLQE 1317
Query: 1262 QQEVRRSTRSRKPVDYNVDDPEIADVGKILSNKESSNEEEAK----QDSVHGVTGEASAD 1317
QE RRS+R RK Y +DD AD S SN++ K QD S
Sbjct: 1318 PQERRRSSRIRKSASYAIDD---ADQPSDHSADRFSNDKVEKDVVVQDQYTYPKTIISQS 1374
Query: 1318 YSRKKQHRADDPSIDKDYIERGGGFCIDDQEIGQPSVSPCDDPFLEAEITKDYMKMGGGF 1377
+ + R S+ DY+E GGGFC+ + E + + D +EA ++DY+ +GGGF
Sbjct: 1375 QNTESSSRTPKQSLQNDYLETGGGFCLVEDEKSRQEMCQNKDSAMEANNSEDYLTIGGGF 1434
Query: 1378 CHDESETREDQVAAKDPVVTGESPSTCF--------------------DSSDGVHCDVGL 1417
C D+++ D VA D E+ F D+ + GL
Sbjct: 1435 CLDDNDECVDPVAHSDQATILEAQKDDFENDLIPDQSTFSTEEHIVEKDTDARIESLHGL 1494
Query: 1418 GDSTTSSNSKEATNGLENVGRTDTFDTEPNPVVQNATSTDSARNDAGRASRGSLTAMTFL 1477
G+S SN + G ENV + EP ++ + RA G L+AM L
Sbjct: 1495 GNSNPVSNRNSSQVG-ENV------EEEP-------------KDRSVRALGGGLSAMPNL 1534
Query: 1478 RRKRRR 1483
RRKRR+
Sbjct: 1535 RRKRRK 1540
>gi|414865352|tpg|DAA43909.1| TPA: hypothetical protein ZEAMMB73_723390 [Zea mays]
Length = 1531
Score = 330 bits (845), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 157/231 (67%), Positives = 186/231 (80%), Gaps = 8/231 (3%)
Query: 859 LEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
++ E+ L E +YLG E++KLE +AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA
Sbjct: 884 VDAELSRLRQEQIYLGHERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 943
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMA 978
YME+ NLVDGVVTDDSDVFLFGAR+VYKNIFDDRKYVETYFM+DIE +LGL+RE+LIRMA
Sbjct: 944 YMEINNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDIESELGLSREQLIRMA 1003
Query: 979 LLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK 1038
LLLGSDYTEG+SGIGIVNAIEVV+AFPEEDGL KF+EWIESPDP+I GK ++ S+K
Sbjct: 1004 LLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLQKFKEWIESPDPSIFGKLHMEISGRSKK 1063
Query: 1039 RRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
R+ + D D G + Q +DKQS+ +++K+IFM KH
Sbjct: 1064 RKLDENDSD--------GKGKGLEPECIQGSDDKQSSNEDEHVKEIFMSKH 1106
Score = 293 bits (751), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 238/586 (40%), Positives = 327/586 (55%), Gaps = 86/586 (14%)
Query: 67 KSASKSATANLLEEDGDE-----------DEEIILPTMGGNVDPAVFAALPPSMQHQLLV 115
K+A K ++L + D D+ +E + GG +PA + + + + L
Sbjct: 104 KTAEKLLLSHLAKADADQTQQHDTHTYAPEEALGFTRCGGRAEPAGWHEWLKARKLEELA 163
Query: 116 RN-------NDAKGKNVLSDDLGQADT-----VGISPESHDVVSKSRDHKKLDEMLAASI 163
+DAKGK V S + G+ + +G + S V+ S + +K+D MLAAS+
Sbjct: 164 EQIRSDRAKHDAKGKQVESSNGGETEKTSQNQIGDTNNSEGNVA-SINQEKVDGMLAASL 222
Query: 164 AAEEDGSLSNNASASAASLPL-----EEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQL 218
AAEED ++ + S PL +ED D+DE MI P TG++DPAVLA+LPPSMQL
Sbjct: 223 AAEEDTDFTDEGTHHLTSAPLPEGDEIDEDEDDDEGMIFPMTTGDIDPAVLASLPPSMQL 282
Query: 219 DLLVQMREQLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAG 278
DLLVQMRE++MAENRQKYQK+KK P KFSELQIQ+YLKTVAFRREID+VQK+++G+G G
Sbjct: 283 DLLVQMRERVMAENRQKYQKIKKEPAKFSELQIQSYLKTVAFRREIDQVQKSSSGKGSGG 342
Query: 279 VQTSRIASEANREFIFSSSFTGDKQVLTSSRVEGKKDEQQQIPSEHPVSDSANNGASIDK 338
VQTS+IASEANREFIFSSSFTGDKQ+L Q+ EH V ++ + I
Sbjct: 343 VQTSKIASEANREFIFSSSFTGDKQMLA-----------QRGEKEHNVENTRSK-KEIHS 390
Query: 339 SNFSSTDQSNSVTKLGPEESR--KSFADDVETYLDERGRVRLSKVRAMGIRMTRDLQRNL 396
S F+S + ++S+ + P S+ F DVETY DERGR+R+S+VRAMGIRMTRD+QRNL
Sbjct: 391 SVFAS-NPTSSLGTMKPPNSKTLSDFGPDVETYRDERGRIRVSRVRAMGIRMTRDIQRNL 449
Query: 397 EMMKEIEQERPNGNNITGAGSMLTLNETGTSKAVPS---EKRKFIGTSLDDTNESVSSIE 453
+ +KE EQ + G T + T NE P E K + D + +S +
Sbjct: 450 DFIKENEQVKSKGQTQTNFHNGSTGNEEPPD--FPEHLFESNKLQSSCSPDVD--LSETD 505
Query: 454 R-NKQSTLKSGI-------------SLELSFKDNSENNCDDDDDIFAHLAAGKPVIFPNS 499
R N Q++ + G ++E+SF + D D+DIF L +G + PN+
Sbjct: 506 RDNHQTSSQIGTDIISESSCYGNKEAIEISFSVDQTEVKDGDEDIFLQLVSG---MAPNN 562
Query: 500 PRAHSSISV--------SDSDWEEGTTERKGSSLSDDANAGINPPLNLEEGGISDESEVE 551
+ ++ V S+ WE+G E S + D + +L E D E+E
Sbjct: 563 IFSGNNCLVKKMEESVDSECIWEDGVIEAGTSPVKIDMK---DHKSSLPENCSDD--EME 617
Query: 552 WEEGPSCAP---KSSLSFPAESEKTVSNIEEEANLQEAIRRSLLDV 594
WEEG S P SS P + K ++EE A +QEAIRRSL D
Sbjct: 618 WEEGDSFVPGVASSSEHNPCNAPK--GDLEEAALVQEAIRRSLEDF 661
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 182/421 (43%), Gaps = 89/421 (21%)
Query: 1087 DKH-TQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRKNN 1145
+KH TQLR+EAFY+FNERFAKIRSKRIKKA+KGITG +S L D++ Q+
Sbjct: 1177 NKHETQLRMEAFYSFNERFAKIRSKRIKKAIKGITG-KSFLDADESEQD----------- 1224
Query: 1146 GLENGNNRSQKAPKKAEESVSGAQNNMEKSSQSQSRERKVLEKFVLAEME-----NPERL 1200
N + K KK E S SS ++ RE++ + V+ E N L
Sbjct: 1225 -----NPSTSKTIKKKEAS---------SSSHARGREKRKNDYGVMGSQEDNIIDNTNSL 1270
Query: 1201 TPAGGGRNANNVFRGNRRGKGQRVGRGRGRRRLCA--------EQSETSSSDDIGSDDTQ 1252
NN +RG +GRGR R A E E S +D+
Sbjct: 1271 AETVENTRENNNTTKIKRGSSCGRPKGRGRSRTTAGSDATINQEDYEIEYSTSASDEDSC 1330
Query: 1253 EYYSEKF--EGQQEVRRSTRSRKPVDYNVDDPEIA--DVGKILSNKESSNEEEAKQDSVH 1308
+ +S + EG+ +RRS+R RK V Y D E DV +++ + + A D
Sbjct: 1331 KRHSNSYGSEGRA-LRRSSRKRKQVTYMEDGHEAYGNDVPMHQNDENNPGQPAAAAD--- 1386
Query: 1309 GVTGEASADYSRKKQHRADDPSIDKDYIERGGGFCIDDQEIGQPSVSPCDDPFLEAEITK 1368
V GE D H+ D ++ + G G D E Q +D +++ K
Sbjct: 1387 -VAGE---DTGFNIYHQ-DTSELNSSQMHTGAGITEDINEDSQ-RFELREDNQVDS-TPK 1439
Query: 1369 DYMKMGGGFCH----DESETREDQVAAK-DPVVTGESPSTCFDSSDGVHCDVGLGDSTTS 1423
DY+ GGGFC DE E DQ A+ +P +G P D + +S +
Sbjct: 1440 DYLFNGGGFCMEGEGDEQEPACDQSGAEVEPGPSG--PCGAMDE---------VSESASI 1488
Query: 1424 SNSKEATNGLENVGRTDTFDTEPNPVVQNATSTDSARNDAGRASRGSLTAMTFLRRKRRR 1483
S + E T R A+S+ R +ASRG L+AM L ++RR+
Sbjct: 1489 STAMECTENARMEAR-------------GASSSQQRR----KASRG-LSAMPTLIKRRRK 1530
Query: 1484 S 1484
S
Sbjct: 1531 S 1531
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 19/132 (14%)
Query: 2 RLKELALDLENQRQIQKRDPEGKKVLSDMENCSERT-----------DGVSASDDKENLD 50
+L+ELA + + R K D +GK+V S +E+T +G AS ++E +D
Sbjct: 158 KLEELAEQIRSDRA--KHDAKGKQVESSNGGETEKTSQNQIGDTNNSEGNVASINQEKVD 215
Query: 51 EMLAASIAAEANESSSKSASKSATANLL------EEDGDEDEEIILPTMGGNVDPAVFAA 104
MLAAS+AAE + + + T+ L +ED D+DE +I P G++DPAV A+
Sbjct: 216 GMLAASLAAEEDTDFTDEGTHHLTSAPLPEGDEIDEDEDDDEGMIFPMTTGDIDPAVLAS 275
Query: 105 LPPSMQHQLLVR 116
LPPSMQ LLV+
Sbjct: 276 LPPSMQLDLLVQ 287
>gi|357113521|ref|XP_003558551.1| PREDICTED: uncharacterized protein LOC100824635 [Brachypodium
distachyon]
Length = 1460
Score = 330 bits (845), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 229/514 (44%), Positives = 301/514 (58%), Gaps = 62/514 (12%)
Query: 118 NDAKGKNVLSDDLGQADTVGISPESHDVVSKSR------DHKKLDEMLAASIAAEEDGSL 171
+DAKGK + S+ + + P +D SR + +KLDE+LAAS+AAE++ L
Sbjct: 133 HDAKGKQIESNTGEETEKTYGDPNRNDDGGNSRGTIAPINQEKLDELLAASLAAEDEADL 192
Query: 172 SNNASASAASLPLEEEDG------DEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMR 225
++ ++AS+PL++ G D+DEEMI P TG++DPAVLA+LPPSMQLDLLVQMR
Sbjct: 193 TDKGGHNSASVPLQQGTGIDEDENDDDEEMIFPVTTGDIDPAVLASLPPSMQLDLLVQMR 252
Query: 226 EQLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIA 285
E++MAENRQKYQK+KK P KFSELQIQ+YLKTVAFRREI+EVQ+ AAG+ V G+QTS+IA
Sbjct: 253 ERVMAENRQKYQKIKKEPAKFSELQIQSYLKTVAFRREIEEVQRGAAGKDVGGIQTSKIA 312
Query: 286 SEANREFIFSSSFTGDKQVLTSSRVEGKKDEQQQIPSEHPVSDSANNGASIDKSNFSSTD 345
SEANREFIFSSSFTGDKQ L Q+ EH V D+ + I + F S+
Sbjct: 313 SEANREFIFSSSFTGDKQTLA-----------QRGVGEHNV-DNVKSKREISSTVFKSS- 359
Query: 346 QSNSVTKLGPEESR--KSFADDVETYLDERGRVRLSKVRAMGIRMTRDLQRNLEMMKEIE 403
S+S + P S + F DVETY DERGR+R+S+VRAMGIRMTRD+QRNL+ +KE E
Sbjct: 360 PSSSSRSINPHNSEPLRDFGPDVETYCDERGRIRVSRVRAMGIRMTRDIQRNLDFIKEHE 419
Query: 404 QERPNGNNITGAGSMLT---------LNETGTSKAVPSEKRKFIGTSLDDTNESVSSI-- 452
Q + G G GS L E ++ S F + D N SS+
Sbjct: 420 QAKSTGQTDVGNGSTSNEEPPNFPEHLFENDGLQSSVSFSEDFADITGD--NHHTSSLIG 477
Query: 453 ---ERNKQSTLKSGISLELSFKDNSENNCDDDDDIFAHLAAGKPV-IFPNSPRAHSSISV 508
++ S S ++E+SF D+ D+DD +F HL +G IF + R +
Sbjct: 478 GSDGISEGSCHGSKGTIEISFVDDQIGVSDNDDKLFLHLVSGTSSNIFAAADRFAKNTEE 537
Query: 509 SDSD----WEEGTTERKGSSLSDDANAGINPPLNLEEGGISDESEVEWEEGPSCAPKSSL 564
SD + WEEG E S D+ + PP N ++ EVEWE+G P
Sbjct: 538 SDDNSEGIWEEGVIEETLSMKVDEKDRQSTPPDNC-----YNDDEVEWEDGGCDVP---- 588
Query: 565 SFPAESEK-----TVSNIEEEANLQEAIRRSLLD 593
P+ SE T +IEEEA +QEAI+RSL D
Sbjct: 589 GVPSSSEYNQCKLTKGDIEEEALIQEAIKRSLED 622
Score = 327 bits (837), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 160/231 (69%), Positives = 189/231 (81%), Gaps = 8/231 (3%)
Query: 859 LEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
LEEE+ L E + LG+E++KLE +AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA
Sbjct: 836 LEEEISFLRQEQVNLGNERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 895
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMA 978
YME+ NLVDGVVTDDSDVFLFGAR+VYKNIFDDRKYVETYFM+DIE +LGLTR++LIRMA
Sbjct: 896 YMEINNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDIESELGLTRDQLIRMA 955
Query: 979 LLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK 1038
LLLGSDYTEGISGIGIVNAIEVV+AF EEDGL KFREWIESPDP ILGK + +T S +
Sbjct: 956 LLLGSDYTEGISGIGIVNAIEVVHAFSEEDGLQKFREWIESPDPAILGKLEKETSDGSTR 1015
Query: 1039 RRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
R+S G + + NS+ + + + K S+ ++++KKIFM+KH
Sbjct: 1016 RKS--GGNESSEKGNSL------EPECVEGSDGKHSSNETEHIKKIFMNKH 1058
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 152/347 (43%), Gaps = 45/347 (12%)
Query: 1087 DKH-TQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRKNN 1145
+KH TQLR+EAFY+FNERFAKIRSKRIKKA+KGIT G+ S++ +
Sbjct: 1129 NKHETQLRMEAFYSFNERFAKIRSKRIKKAIKGIT-----------GKTFSETDE----- 1172
Query: 1146 GLENGNNRSQKAPKKAEESVSG-AQNNMEKSSQSQSRERKVLEKFVLAEMENPERLTPAG 1204
L++ + + +APKK E S A+ +++S + ++ ++ T +
Sbjct: 1173 -LDHDSPSTSEAPKKKEAGPSSHAKPRGKRNSNAGPNSFAAADELAKEHSNASKKKTASP 1231
Query: 1205 GGRNANNVFRGNRRGKGQRVGRGRGRRRLCAEQSETSSSDDIGSDDTQEYYSEKFEGQ-Q 1263
GR+ + G V + E SE +S DT + ++ ++ +
Sbjct: 1232 SGRSRGRGRKRTNAGHETAVSQ---------EDSEVKTSTFSSDVDTHKSHAGNYKSEGT 1282
Query: 1264 EVRRSTRSRKPVDYNVDDPEIADVGKILSNKESSNEEEAKQDSVHGVTGEASADYSRKKQ 1323
+RRS R RK V Y D E D + + ++ A D A D
Sbjct: 1283 ALRRSNRKRKQVTYMEDGHEADDNDTPVYQADENDPSPAASDI-------AGRDTQSNMF 1335
Query: 1324 HRADDPSIDKDYIERGGGFCIDDQEIGQPSVSPCDDPFLEAEITKDYMKMGGGFCHDESE 1383
H+ D +++D I G +D E C+D A K+Y+ GGGFC +E E
Sbjct: 1336 HQ-DTSELNRDQIHADPGTAVDMSE----DFEFCEDQTDSA--PKEYLFTGGGFCMEEDE 1388
Query: 1384 TREDQVAAKDPVVTGESPSTCFDSSDGVHCDVGLGDSTTSSNSKEAT 1430
+D + + S F+ GV D G+ STT ++ A+
Sbjct: 1389 -EQDAPGDRPGAEIKDGTSDAFEDIGGV-SDSGIDLSTTGECAENAS 1433
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 22/135 (16%)
Query: 2 RLKELALDLENQRQIQKRDPEGKKVLSDMENCSERT-------------DGVSASDDKEN 48
RL+ELA +++ R K D +GK++ S+ +E+T G A ++E
Sbjct: 118 RLEELAAKIKSDRA--KHDAKGKQIESNTGEETEKTYGDPNRNDDGGNSRGTIAPINQEK 175
Query: 49 LDEMLAASIAAE-ANESSSKSASKSATANLLEEDG------DEDEEIILPTMGGNVDPAV 101
LDE+LAAS+AAE + + K SA+ L + G D+DEE+I P G++DPAV
Sbjct: 176 LDELLAASLAAEDEADLTDKGGHNSASVPLQQGTGIDEDENDDDEEMIFPVTTGDIDPAV 235
Query: 102 FAALPPSMQHQLLVR 116
A+LPPSMQ LLV+
Sbjct: 236 LASLPPSMQLDLLVQ 250
>gi|297600506|ref|NP_001049313.2| Os03g0205400 [Oryza sativa Japonica Group]
gi|255674294|dbj|BAF11227.2| Os03g0205400 [Oryza sativa Japonica Group]
Length = 1470
Score = 327 bits (839), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/292 (58%), Positives = 206/292 (70%), Gaps = 43/292 (14%)
Query: 813 IYDTDIEQKSAEERTPD--------TYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQ 864
+ DT +++++ +RT D T L D N GI++ A LE+E+
Sbjct: 783 VPDTAVQKENMIQRTTDLSTSEINYTKLND---NVGIYSVSASN----------LEKELS 829
Query: 865 ILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELAN 924
+L E YLG+E++KLE +AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYME+ N
Sbjct: 830 LLRQEQEYLGNERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEMTN 889
Query: 925 LVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSD 984
LVDGVVTDDSDVFLFGAR+VYKNIFDDRKYVETY M+DIE +LGLTRE+LIRMA+LLGSD
Sbjct: 890 LVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYLMKDIESELGLTREQLIRMAMLLGSD 949
Query: 985 YTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQ----TGASSRKRR 1040
YTEGISGIGIVNAIEV +AFPEEDGL KFREW+ESPDPT+LGK ++ + R
Sbjct: 950 YTEGISGIGIVNAIEVAHAFPEEDGLQKFREWVESPDPTLLGKLGMESGSSSKKKKSGRN 1009
Query: 1041 SSDGDKDV---NYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
SDG + YAK S +D QS+ +Q +K+IFM KH
Sbjct: 1010 HSDGKGNSLEPEYAKGS---------------DDSQSSNETQRIKEIFMSKH 1046
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 194/429 (45%), Positives = 247/429 (57%), Gaps = 63/429 (14%)
Query: 194 EMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQIQA 253
EMI P TG++DPAVLA+LPPSMQLDLLVQMRE++MAENRQKYQK+KK P KFSELQIQ+
Sbjct: 221 EMIFPMTTGDIDPAVLASLPPSMQLDLLVQMRERVMAENRQKYQKIKKEPAKFSELQIQS 280
Query: 254 YLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVEGK 313
YLKTVAFRREIDEVQ+ AAGRGV GVQTS+IASEANREFIFSSSFTGDKQ L
Sbjct: 281 YLKTVAFRREIDEVQRGAAGRGVGGVQTSKIASEANREFIFSSSFTGDKQTLA------- 333
Query: 314 KDEQQQIPSEHPVSDSANNGASIDKSNFSSTDQSNSVTKLGPEESRK--SFADDVETYLD 371
Q+ EH V DS + I+ + F S + ++S + + P S SF DVETY D
Sbjct: 334 ----QRGGKEHIV-DSIKSKREINPAVFKS-NPTSSSSSIKPNNSEPLGSFGPDVETYRD 387
Query: 372 ERGRVRLSKVRAMGIRMTRDLQRNLEMMKEIEQERPNGNNITGAGSMLTLNETGTSKAVP 431
ERGR+R+S+V+AMGIRMTRD+QRNL+ +KE EQ R G++ G L NE +
Sbjct: 388 ERGRIRVSRVKAMGIRMTRDIQRNLDFIKEHEQVRNRGHDSVVEG--LANNE----EPPD 441
Query: 432 SEKRKFIGTSL-------DDTNESVSSIERNKQSTLKSGIS----------LELSFKDNS 474
+ F G L +D +E+ S IS +E+SF D+
Sbjct: 442 FPEHLFEGNGLRSSLHLSEDYDETASDNHHTSSLVGSDKISEGDYHGSKETIEISFADDQ 501
Query: 475 ENNCDDDDDIFAHLAAGKPVIFPNSPRAHSSISVSDSDWEEGTTERKGSSLSDDANAGIN 534
D+DD IF HLA+G + + S ++ +EG E +
Sbjct: 502 TEVKDNDDQIFLHLASGASSNLFTTEQTDGSDCIT----KEGVLESE------------T 545
Query: 535 PPLNLEEG--------GISDESEVEWEEGPSCAPKSSLSFPAESEKTV-SNIEEEANLQE 585
PP+ ++E + E+EWEEG P S + K ++EE+A +QE
Sbjct: 546 PPMQVDEKDHQASLMDNFCTDDEIEWEEGGCDVPGGPSSNENDQSKVPKGDLEEDALVQE 605
Query: 586 AIRRSLLDV 594
AIRRSL D
Sbjct: 606 AIRRSLEDF 614
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 146/333 (43%), Gaps = 76/333 (22%)
Query: 1087 DKH-TQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDAGQE---VSKSRKKR 1142
+KH TQLR+EAFY+FNERFAKIRSKRIKKA+KGITG +S L D+ + S + KK+
Sbjct: 1117 NKHETQLRMEAFYSFNERFAKIRSKRIKKAIKGITG-KSFLETDELDHDSPSTSNTSKKK 1175
Query: 1143 KNNGLENGNNRSQKAPKKAEESVSGAQNNMEKSSQSQSRERKVLEKFVLAEMENPERLTP 1202
+ G + Q+ K +G Q+ + + V A E+ T
Sbjct: 1176 ERTSSGRGRAKGQRT-KDVGPGNTGNQD------------YDIADSLVDAGEHTTEKST- 1221
Query: 1203 AGGGRNANNVFRGNRRGKGQR--------VGRGRGRRRLCAEQSETSSSDDIGSDDTQEY 1254
+ R AN+ G RGKG+R +G G ++ S +S +D T +Y
Sbjct: 1222 SSKKRTANS--SGGSRGKGRRSMNAAHVIIGNGED-----SDVSNLASDEDSHIRHTNDY 1274
Query: 1255 YSEKFEGQQEVRRSTRSRKPVDYNVDDPEIAD----VGKILSNKESSNEEE--------- 1301
SE +RRS R RK V Y D E D + +I N+ + EE
Sbjct: 1275 ESEGLT----LRRSNRKRKQVTYAEDGQEADDNDVSIHQIDENQGQGSLEEDMCHMAGLD 1330
Query: 1302 AKQDSVHGVTGEASADYSRKKQHRADDPSIDKDYIERGGGFCIDDQEIGQPSVSPCDDPF 1361
+ + +H T E + D + DPS D E GF + E +P
Sbjct: 1331 TQSNLLHQDTSELNIDQTHT------DPS---DMNEDPSGFEL--PEDCHTDTAP----- 1374
Query: 1362 LEAEITKDYMKMGGGFCH---DESETREDQVAA 1391
KDY+ GGGFC DE +T DQ A
Sbjct: 1375 ------KDYLFTGGGFCMEEGDEQDTGVDQSGA 1401
Score = 45.4 bits (106), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 87 EIILPTMGGNVDPAVFAALPPSMQHQLLVR 116
E+I P G++DPAV A+LPPSMQ LLV+
Sbjct: 221 EMIFPMTTGDIDPAVLASLPPSMQLDLLVQ 250
>gi|242041837|ref|XP_002468313.1| hypothetical protein SORBIDRAFT_01g043560 [Sorghum bicolor]
gi|241922167|gb|EER95311.1| hypothetical protein SORBIDRAFT_01g043560 [Sorghum bicolor]
Length = 1489
Score = 327 bits (837), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 157/231 (67%), Positives = 184/231 (79%), Gaps = 8/231 (3%)
Query: 859 LEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
++ E+ L E + LG E++KLE +AESVSSEMFAECQELLQMFGLPYIIAP EAEAQCA
Sbjct: 837 VDAELSRLRQEQIDLGHERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPTEAEAQCA 896
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMA 978
YME+ NLVDGVVTDDSDVFLFGAR+VYKNIFDDRKYVETYFM+DIE +LGLTRE+LIRMA
Sbjct: 897 YMEINNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDIESELGLTREQLIRMA 956
Query: 979 LLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK 1038
LLLGSDYTEG+SGIGIVNAIEVV+AFPEEDGL KF+EWIESPDP+I GK V+ S+K
Sbjct: 957 LLLGSDYTEGVSGIGIVNAIEVVHAFPEEDGLQKFKEWIESPDPSIFGKLHVEASGRSKK 1016
Query: 1039 RRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
R+ D D G + Q +DKQS+ ++++K+IFM KH
Sbjct: 1017 RKLGGNDSD--------GKGKGLEPECIQGSDDKQSSNEAEHVKEIFMSKH 1059
Score = 284 bits (727), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 223/511 (43%), Positives = 294/511 (57%), Gaps = 55/511 (10%)
Query: 118 NDAKGKNVLSDDLGQA-----DTVGISPESHDVVSKSRDHKKLDEMLAASIAAEEDGSLS 172
+DAKGK V S G+ + +G + S + S + +K+DEMLAAS+AAEE+ +
Sbjct: 133 HDAKGKQVESSKEGETEKTSQNQIGDTNNSEGNAA-SINQEKVDEMLAASLAAEEEADFT 191
Query: 173 NNASASAASLPLEEEDGDEDEE-----MILPAMTGNVDPAVLAALPPSMQLDLLVQMREQ 227
+ S+PL E +++E MI P TG++DPAVLA+LPPSMQLDLLVQMRE+
Sbjct: 192 DEGKHHFTSVPLPEGAEIDEDEDDDEGMIFPMTTGDIDPAVLASLPPSMQLDLLVQMRER 251
Query: 228 LMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASE 287
+MAENRQKYQK+KK P KFSELQIQ+YLKTVAFRREID+VQK+AAG+G GVQTS+IASE
Sbjct: 252 VMAENRQKYQKIKKEPAKFSELQIQSYLKTVAFRREIDQVQKSAAGKGGGGVQTSKIASE 311
Query: 288 ANREFIFSSSFTGDKQVLTSSRVEGKKDEQQQIPSEHPVSDSANNGASIDKSNFSSTDQS 347
ANREFIFSSSFTGDKQ+L R EH V ++ + I+ S F+S + +
Sbjct: 312 ANREFIFSSSFTGDKQMLAQRR-----------EKEHNVENTKSK-KEINSSVFTS-NPT 358
Query: 348 NSVTKLGPEESRKS---FADDVETYLDERGRVRLSKVRAMGIRMTRDLQRNLEMMKEIEQ 404
NS+ + P S K F DVETY DERGR+R+S+VRAMGIRMTRD+QRNL+ +KE EQ
Sbjct: 359 NSLGTMKPPNSSKPSRDFGPDVETYRDERGRIRVSRVRAMGIRMTRDIQRNLDFIKENEQ 418
Query: 405 ERPNGNNITGAGSMLTLNETG-------------TSKAVPSEKRKFIGTSLDDTNESVSS 451
+ G T + T NE S P E T+ V +
Sbjct: 419 VKSKGQTQTSVHNGSTGNEEPPVFPEHLFESNKLQSSCNPDEDLSETDRENHQTSSQVEA 478
Query: 452 IERNKQSTLKSGI-SLELSFKDNSENNCDDDDDIFAHLAAGKP--VIFPNSPRAHSSISV 508
+ +S+ ++E+SF + D D+DIF L +G + N+ ++
Sbjct: 479 ADNISESSCHGNKEAIEISFSVDQTELKDGDEDIFLQLVSGSTSNMFSGNNCLVKNTEES 538
Query: 509 SDSD--WEEGTTERKGSSLSDDANAGINPPLNLEEGGISDESEVEWEEGPSCAP---KSS 563
DS+ WE+G E S + G N + SD+ E+EWEEG S AP SS
Sbjct: 539 EDSECIWEDGVIEAGTSPM----KVGKNDHKSSLPENCSDD-EMEWEEGDSFAPGVASSS 593
Query: 564 LSFPAESEKTVSNIEEEANLQEAIRRSLLDV 594
P + K ++EE A +QEAIRRSL D
Sbjct: 594 EHNPCNAPK--GDLEEAALVQEAIRRSLEDF 622
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 133/415 (32%), Positives = 187/415 (45%), Gaps = 72/415 (17%)
Query: 1087 DKH-TQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDA---GQEVSKSRKKR 1142
+KH TQLR+EAFY+FNERFAKIRSKRIKKA+KGITG +S L D+ SK+ KK+
Sbjct: 1130 NKHETQLRMEAFYSFNERFAKIRSKRIKKAIKGITG-KSFLDTDEPEPDNPSTSKTIKKK 1188
Query: 1143 KNNGLENGNNRSQKAPKKAEESVSGAQNNMEKSSQSQSRERKVLEKFVLAEMENPERLTP 1202
+ N + R ++ ++ SG +N ME S+E V + LA+ +T
Sbjct: 1189 EANSSSHARGRGKR------KNNSGIRN-ME------SQEDNVGDTNSLADTV---EIT- 1231
Query: 1203 AGGGRNANNVFRGNRRGKGQRVGR--GRGRRRLCAEQSETSSSDDI--------GSDDTQ 1252
R NN +R +G GR GRGR R A T S +D +D+
Sbjct: 1232 ----RENNNT---TKRKRGSPCGRSKGRGRSRTNAGNDATISQEDYEIEYSTSASDEDSC 1284
Query: 1253 EYYSEKF--EGQQEVRRSTRSRKPVDYNVDDPEIADVGKILSNKESSNEEEAKQDSVHGV 1310
+ +S + EG+ +RRS+R RK V Y D E D + + +N +A V
Sbjct: 1285 KRHSNSYGSEGRA-LRRSSRKRKQVTYMEDGHEAYDNDVPMHQNDENNPGQAA-----AV 1338
Query: 1311 TGEASADYSRKKQHRADDPSIDKDYIERGGGFCIDDQEIGQPSVSPCDDPFLEAEITKDY 1370
A D H+ D ++ + G G D E Q D+ A KDY
Sbjct: 1339 ADMAGEDTGFNLYHQ-DTSELNSSRMHIGAGTTEDINEDSQDFELREDNQVDSA--PKDY 1395
Query: 1371 MKMGGGFCHDESETREDQVAAKDPVVTGE-SPSTCFDSSDGVHCDVGLGDSTTSSNSKEA 1429
+ GGGFC +E E E + A E PS D+ DGV +S S++ A
Sbjct: 1396 LFSGGGFCMEEGEGNEQEPAGHQSGAEIEPEPSGPCDAMDGV------SESCKSASLSTA 1449
Query: 1430 TNGLENVGRTDTFDTEPNPVVQNATSTDSARNDAGRASRGSLTAMTFLRRKRRRS 1484
EN + A+S+ R +ASRG +AM L ++RR+S
Sbjct: 1450 GECTENASME----------ARGASSSQQRR----KASRG-FSAMPTLTKRRRKS 1489
Score = 48.9 bits (115), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 19/132 (14%)
Query: 2 RLKELALDLENQRQIQKRDPEGKKVLSDMENCSERT-----------DGVSASDDKENLD 50
+L+ELA + + R K D +GK+V S E +E+T +G +AS ++E +D
Sbjct: 118 KLEELAEQIRSDRA--KHDAKGKQVESSKEGETEKTSQNQIGDTNNSEGNAASINQEKVD 175
Query: 51 EMLAASIAAEANESSSKSASKSATANLLEEDGDEDEE------IILPTMGGNVDPAVFAA 104
EMLAAS+AAE + T+ L E + DE+ +I P G++DPAV A+
Sbjct: 176 EMLAASLAAEEEADFTDEGKHHFTSVPLPEGAEIDEDEDDDEGMIFPMTTGDIDPAVLAS 235
Query: 105 LPPSMQHQLLVR 116
LPPSMQ LLV+
Sbjct: 236 LPPSMQLDLLVQ 247
>gi|326527491|dbj|BAK08020.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1503
Score = 318 bits (814), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/235 (67%), Positives = 191/235 (81%), Gaps = 8/235 (3%)
Query: 855 TEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAE 914
+E LE+E+ L E + LG+E++KLE +AESVSSEMFAECQELLQMFGLPYIIAPMEAE
Sbjct: 839 SENNLEDEISFLRQEQVDLGNERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEAE 898
Query: 915 AQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKL 974
AQCAYME+ NLVDGVVTDDSDVFLFGAR+VYKNIFDDRKYVETY M+DIE +LGLTRE+L
Sbjct: 899 AQCAYMEINNLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYLMKDIESELGLTREQL 958
Query: 975 IRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGA 1034
IRMA+LLGSDYTEGISGIGIVNAIEVV+AFPEEDGL +FREWIESPDP ILGKFDV++
Sbjct: 959 IRMAMLLGSDYTEGISGIGIVNAIEVVHAFPEEDGLQQFREWIESPDPAILGKFDVESSG 1018
Query: 1035 SSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
SS++R+S + S + + + ++ QS+ +Q++K++FM H
Sbjct: 1019 SSKRRKSGGNE--------SCEKGNSLEPECVEGSDNNQSSNETQHIKEVFMSNH 1065
Score = 94.0 bits (232), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 165/376 (43%), Gaps = 68/376 (18%)
Query: 1087 DKH-TQLRLEAFYTFNERFAKIRSKRIKKAVKGITG---SQSLLLMDDAGQEVSKSRKKR 1142
+KH TQLR+EAFY+FNERFAKIRSKRI+KA+KGITG S++ L +D+ +KK
Sbjct: 1136 NKHETQLRMEAFYSFNERFAKIRSKRIQKAIKGITGKTFSETDELNEDSPSTSDAPKKKE 1195
Query: 1143 KNNGLENGNNRSQKAPKKAEESVSGAQNNM---EKSSQSQSRERKVLEKFVLAEMENPER 1199
RS +A + + + S NM E + ++ V + ++
Sbjct: 1196 A--------GRSSRAKPRGKRNTSAEPRNMGSQEDDKIGDPNSFAIADELVKEQRNVSKK 1247
Query: 1200 LTPAGGGRNANNVFRGNRRGKGQRVGRGRGRRRLCAEQSETSSSDDIGSDDTQEYYSEKF 1259
T + GR+ RG+G++ GR + E E S+ G +D+ + +++K+
Sbjct: 1248 KTASPSGRS---------RGRGRKKMNGRQETTIDEEDPEVQMSNLSGDEDSHKRHTDKY 1298
Query: 1260 --EGQQEVRRSTRSRKPVDYNVDDPEIADVGKILSNKESSNEEEAKQDSVHGV------- 1310
EG VRRS R RK V Y DD E D L +E + +H V
Sbjct: 1299 ISEGMT-VRRSNRKRKQVTYMEDDHEADDNNIPLHQVNDDHEADENNFPLHQVDEDDPSR 1357
Query: 1311 ------TGEASADYSRKKQHRAD--------DPSIDKDYIERGGGFCIDDQEIGQPSVSP 1356
T A + +Q ++ DP +D E GF + D +I +P
Sbjct: 1358 IGTDIDTAGRDAQSNLVRQDTSELNSDQMHVDPGTAEDLNEDPLGFELYDDQIDS---AP 1414
Query: 1357 CDDPFLEAEITKDYMKMGGGFCHDESETREDQVAAKDPVVTGESPSTCFDSS--DGVHCD 1414
K+Y+ GGGFC +E E Q A D + C D + G
Sbjct: 1415 -----------KEYLFTGGGFCAEEDE----QDTAADGETVDGTGDACEDIAGVSGGGQS 1459
Query: 1415 VGLGDSTTSSNSKEAT 1430
+GL +TT +++EA+
Sbjct: 1460 IGLSSTTTGESAEEAS 1475
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 77/136 (56%), Gaps = 24/136 (17%)
Query: 2 RLKELALDLENQRQIQKRDPEGKKVLSDMENCSERTDG-VSASDDKEN------------ 48
RL+ELA +++ R K D + K++ S +E+TDG + +DD EN
Sbjct: 118 RLEELAAQIKSDRA--KHDAKDKQIESSRGEETEKTDGDQNQNDDGENSRGAVAPINQEK 175
Query: 49 LDEMLAASIAAEANESS--SKSASKSATANLLEEDG------DEDEEIILPTMGGNVDPA 100
LDE+LAAS+AAE +E+ K A+ L E G D+DEE+I P G++DPA
Sbjct: 176 LDELLAASLAAE-DEAGLIGKGEHNPASVPLQEGTGIDEEENDDDEEMIFPMTTGDIDPA 234
Query: 101 VFAALPPSMQHQLLVR 116
V A+LPPS+Q LLV+
Sbjct: 235 VLASLPPSIQLDLLVQ 250
>gi|108706747|gb|ABF94542.1| XPG I-region family protein, expressed [Oryza sativa Japonica Group]
Length = 1477
Score = 317 bits (811), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/314 (55%), Positives = 206/314 (65%), Gaps = 65/314 (20%)
Query: 813 IYDTDIEQKSAEERTPD--------TYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQ 864
+ DT +++++ +RT D T L D N GI++ A LE+E+
Sbjct: 783 VPDTAVQKENMIQRTTDLSTSEINYTKLND---NVGIYSVSASN----------LEKELS 829
Query: 865 ILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELAN 924
+L E YLG+E++KLE +AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYME+ N
Sbjct: 830 LLRQEQEYLGNERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEMTN 889
Query: 925 LVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFM----------------------QD 962
LVDGVVTDDSDVFLFGAR+VYKNIFDDRKYVETY M QD
Sbjct: 890 LVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYLMKLKQWEVHVLAGPSTANIVIHFQD 949
Query: 963 IEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDP 1022
IE +LGLTRE+LIRMA+LLGSDYTEGISGIGIVNAIEV +AFPEEDGL KFREW+ESPDP
Sbjct: 950 IESELGLTREQLIRMAMLLGSDYTEGISGIGIVNAIEVAHAFPEEDGLQKFREWVESPDP 1009
Query: 1023 TILGKFDVQ----TGASSRKRRSSDGDKDV---NYAKNSVGGVSEFDESISQFDEDKQSA 1075
T+LGK ++ + R SDG + YAK S +D QS+
Sbjct: 1010 TLLGKLGMESGSSSKKKKSGRNHSDGKGNSLEPEYAKGS---------------DDSQSS 1054
Query: 1076 EYSQNMKKIFMDKH 1089
+Q +K+IFM KH
Sbjct: 1055 NETQRIKEIFMSKH 1068
Score = 271 bits (693), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 194/429 (45%), Positives = 247/429 (57%), Gaps = 63/429 (14%)
Query: 194 EMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQIQA 253
EMI P TG++DPAVLA+LPPSMQLDLLVQMRE++MAENRQKYQK+KK P KFSELQIQ+
Sbjct: 221 EMIFPMTTGDIDPAVLASLPPSMQLDLLVQMRERVMAENRQKYQKIKKEPAKFSELQIQS 280
Query: 254 YLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVEGK 313
YLKTVAFRREIDEVQ+ AAGRGV GVQTS+IASEANREFIFSSSFTGDKQ L
Sbjct: 281 YLKTVAFRREIDEVQRGAAGRGVGGVQTSKIASEANREFIFSSSFTGDKQTLA------- 333
Query: 314 KDEQQQIPSEHPVSDSANNGASIDKSNFSSTDQSNSVTKLGPEESRK--SFADDVETYLD 371
Q+ EH V DS + I+ + F S + ++S + + P S SF DVETY D
Sbjct: 334 ----QRGGKEHIV-DSIKSKREINPAVFKS-NPTSSSSSIKPNNSEPLGSFGPDVETYRD 387
Query: 372 ERGRVRLSKVRAMGIRMTRDLQRNLEMMKEIEQERPNGNNITGAGSMLTLNETGTSKAVP 431
ERGR+R+S+V+AMGIRMTRD+QRNL+ +KE EQ R G++ G L NE +
Sbjct: 388 ERGRIRVSRVKAMGIRMTRDIQRNLDFIKEHEQVRNRGHDSVVEG--LANNE----EPPD 441
Query: 432 SEKRKFIGTSL-------DDTNESVSSIERNKQSTLKSGIS----------LELSFKDNS 474
+ F G L +D +E+ S IS +E+SF D+
Sbjct: 442 FPEHLFEGNGLRSSLHLSEDYDETASDNHHTSSLVGSDKISEGDYHGSKETIEISFADDQ 501
Query: 475 ENNCDDDDDIFAHLAAGKPVIFPNSPRAHSSISVSDSDWEEGTTERKGSSLSDDANAGIN 534
D+DD IF HLA+G + + S ++ +EG E +
Sbjct: 502 TEVKDNDDQIFLHLASGASSNLFTTEQTDGSDCIT----KEGVLESE------------T 545
Query: 535 PPLNLEEG--------GISDESEVEWEEGPSCAPKSSLSFPAESEKTV-SNIEEEANLQE 585
PP+ ++E + E+EWEEG P S + K ++EE+A +QE
Sbjct: 546 PPMQVDEKDHQASLMDNFCTDDEIEWEEGGCDVPGGPSSNENDQSKVPKGDLEEDALVQE 605
Query: 586 AIRRSLLDV 594
AIRRSL D
Sbjct: 606 AIRRSLEDF 614
Score = 82.8 bits (203), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 143/329 (43%), Gaps = 75/329 (22%)
Query: 1090 TQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDAGQE---VSKSRKKRKNNG 1146
TQLR+EAFY+FNERFAKIRSKRIKKA+KGITG +S L D+ + S + KK++
Sbjct: 1128 TQLRMEAFYSFNERFAKIRSKRIKKAIKGITG-KSFLETDELDHDSPSTSNTSKKKERTS 1186
Query: 1147 LENGNNRSQKAPKKAEESVSGAQNNMEKSSQSQSRERKVLEKFVLAEMENPERLTPAGGG 1206
G + Q+ K +G Q+ + + V A E+ T +
Sbjct: 1187 SGRGRAKGQRT-KDVGPGNTGNQD------------YDIADSLVDAGEHTTEKST-SSKK 1232
Query: 1207 RNANNVFRGNRRGKGQR--------VGRGRGRRRLCAEQSETSSSDDIGSDDTQEYYSEK 1258
R AN+ G RGKG+R +G G ++ S +S +D T +Y SE
Sbjct: 1233 RTANS--SGGSRGKGRRSMNAAHVIIGNGED-----SDVSNLASDEDSHIRHTNDYESEG 1285
Query: 1259 FEGQQEVRRSTRSRKPVDYNVDDPEIAD----VGKILSNKESSNEEE---------AKQD 1305
+RRS R RK V Y D E D + +I N+ + EE + +
Sbjct: 1286 LT----LRRSNRKRKQVTYAEDGQEADDNDVSIHQIDENQGQGSLEEDMCHMAGLDTQSN 1341
Query: 1306 SVHGVTGEASADYSRKKQHRADDPSIDKDYIERGGGFCIDDQEIGQPSVSPCDDPFLEAE 1365
+H T E + D + DPS D E GF + E +P
Sbjct: 1342 LLHQDTSELNIDQTHT------DPS---DMNEDPSGFEL--PEDCHTDTAP--------- 1381
Query: 1366 ITKDYMKMGGGFCH---DESETREDQVAA 1391
KDY+ GGGFC DE +T DQ A
Sbjct: 1382 --KDYLFTGGGFCMEEGDEQDTGVDQSGA 1408
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 87 EIILPTMGGNVDPAVFAALPPSMQHQLLVR 116
E+I P G++DPAV A+LPPSMQ LLV+
Sbjct: 221 EMIFPMTTGDIDPAVLASLPPSMQLDLLVQ 250
>gi|222624409|gb|EEE58541.1| hypothetical protein OsJ_09837 [Oryza sativa Japonica Group]
Length = 1494
Score = 317 bits (811), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 173/314 (55%), Positives = 206/314 (65%), Gaps = 65/314 (20%)
Query: 813 IYDTDIEQKSAEERTPD--------TYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQ 864
+ DT +++++ +RT D T L D N GI++ A LE+E+
Sbjct: 790 VPDTAVQKENMIQRTTDLSTSEINYTKLND---NVGIYSVSASN----------LEKELS 836
Query: 865 ILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELAN 924
+L E YLG+E++KLE +AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYME+ N
Sbjct: 837 LLRQEQEYLGNERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEMTN 896
Query: 925 LVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFM----------------------QD 962
LVDGVVTDDSDVFLFGAR+VYKNIFDDRKYVETY M QD
Sbjct: 897 LVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYLMKLKQWEVHVLAGPSTANIVIHFQD 956
Query: 963 IEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDP 1022
IE +LGLTRE+LIRMA+LLGSDYTEGISGIGIVNAIEV +AFPEEDGL KFREW+ESPDP
Sbjct: 957 IESELGLTREQLIRMAMLLGSDYTEGISGIGIVNAIEVAHAFPEEDGLQKFREWVESPDP 1016
Query: 1023 TILGKFDVQ----TGASSRKRRSSDGDKDV---NYAKNSVGGVSEFDESISQFDEDKQSA 1075
T+LGK ++ + R SDG + YAK S +D QS+
Sbjct: 1017 TLLGKLGMESGSSSKKKKSGRNHSDGKGNSLEPEYAKGS---------------DDSQSS 1061
Query: 1076 EYSQNMKKIFMDKH 1089
+Q +K+IFM KH
Sbjct: 1062 NETQRIKEIFMSKH 1075
Score = 273 bits (697), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 196/436 (44%), Positives = 251/436 (57%), Gaps = 70/436 (16%)
Query: 194 EMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQIQA 253
EMI P TG++DPAVLA+LPPSMQLDLLVQMRE++MAENRQKYQK+KK P KFSELQIQ+
Sbjct: 221 EMIFPMTTGDIDPAVLASLPPSMQLDLLVQMRERVMAENRQKYQKIKKEPAKFSELQIQS 280
Query: 254 YLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVEGK 313
YLKTVAFRREIDEVQ+ AAGRGV GVQTS+IASEANREFIFSSSFTGDKQ L
Sbjct: 281 YLKTVAFRREIDEVQRGAAGRGVGGVQTSKIASEANREFIFSSSFTGDKQTLA------- 333
Query: 314 KDEQQQIPSEHPVSDSANNGASIDKSNFSSTDQSNSVTKLGPEESRK--SFADDVETYLD 371
Q+ EH V DS + I+ + F S + ++S + + P S SF DVETY D
Sbjct: 334 ----QRGGKEHIV-DSIKSKREINPAVFKS-NPTSSSSSIKPNNSEPLGSFGPDVETYRD 387
Query: 372 ERGRVRLSKVRAMGIRMTRDLQRNLEMMKEIEQERPNGNNITGAGSMLTLNETGTSKAVP 431
ERGR+R+S+V+AMGIRMTRD+QRNL+ +KE EQ R G++ G L NE +
Sbjct: 388 ERGRIRVSRVKAMGIRMTRDIQRNLDFIKEHEQVRNRGHDSVVEG--LANNE----EPPD 441
Query: 432 SEKRKFIGTSL-------DDTNESVSSIERNKQSTLKSGIS----------LELSFKDNS 474
+ F G L +D +E+ S IS +E+SF D+
Sbjct: 442 FPEHLFEGNGLRSSLHLSEDYDETASDNHHTSSLVGSDKISEGDYHGSKETIEISFADDQ 501
Query: 475 ENNCDDDDDIFAHLAAGKPVIFPNSPRAHSSISVSDSDWEEGTTERKGSSLSDDANAGIN 534
D+DD IF HLA+G + + S ++ +EG E +
Sbjct: 502 TEVKDNDDQIFLHLASGASSNLFTTEQTDGSDCIT----KEGVLESE------------T 545
Query: 535 PPLNLEEG--------GISDESEVEWEEGPSCAPKSSLSF---PAESEKTVS-----NIE 578
PP+ ++E + E+EWEEG P S+ P+ +E S ++E
Sbjct: 546 PPMQVDEKDHQASLMDNFCTDDEIEWEEGGCDVPGGPSSYSRGPSSNENDQSKVPKGDLE 605
Query: 579 EEANLQEAIRRSLLDV 594
E+A +QEAIRRSL D
Sbjct: 606 EDALVQEAIRRSLEDF 621
Score = 83.6 bits (205), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 146/333 (43%), Gaps = 76/333 (22%)
Query: 1087 DKH-TQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDAGQE---VSKSRKKR 1142
+KH TQLR+EAFY+FNERFAKIRSKRIKKA+KGITG +S L D+ + S + KK+
Sbjct: 1141 NKHETQLRMEAFYSFNERFAKIRSKRIKKAIKGITG-KSFLETDELDHDSPSTSNTSKKK 1199
Query: 1143 KNNGLENGNNRSQKAPKKAEESVSGAQNNMEKSSQSQSRERKVLEKFVLAEMENPERLTP 1202
+ G + Q+ K +G Q+ + + V A E+ T
Sbjct: 1200 ERTSSGRGRAKGQRT-KDVGPGNTGNQD------------YDIADSLVDAGEHTTEKST- 1245
Query: 1203 AGGGRNANNVFRGNRRGKGQR--------VGRGRGRRRLCAEQSETSSSDDIGSDDTQEY 1254
+ R AN+ G RGKG+R +G G ++ S +S +D T +Y
Sbjct: 1246 SSKKRTANS--SGGSRGKGRRSMNAAHVIIGNGED-----SDVSNLASDEDSHIRHTNDY 1298
Query: 1255 YSEKFEGQQEVRRSTRSRKPVDYNVDDPEIAD----VGKILSNKESSNEEE--------- 1301
SE +RRS R RK V Y D E D + +I N+ + EE
Sbjct: 1299 ESEGLT----LRRSNRKRKQVTYAEDGQEADDNDVSIHQIDENQGQGSLEEDMCHMAGLD 1354
Query: 1302 AKQDSVHGVTGEASADYSRKKQHRADDPSIDKDYIERGGGFCIDDQEIGQPSVSPCDDPF 1361
+ + +H T E + D + DPS D E GF + E +P
Sbjct: 1355 TQSNLLHQDTSELNIDQTHT------DPS---DMNEDPSGFEL--PEDCHTDTAP----- 1398
Query: 1362 LEAEITKDYMKMGGGFCH---DESETREDQVAA 1391
KDY+ GGGFC DE +T DQ A
Sbjct: 1399 ------KDYLFTGGGFCMEEGDEQDTGVDQSGA 1425
Score = 45.4 bits (106), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 87 EIILPTMGGNVDPAVFAALPPSMQHQLLVR 116
E+I P G++DPAV A+LPPSMQ LLV+
Sbjct: 221 EMIFPMTTGDIDPAVLASLPPSMQLDLLVQ 250
>gi|218192294|gb|EEC74721.1| hypothetical protein OsI_10446 [Oryza sativa Indica Group]
Length = 1487
Score = 315 bits (807), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/307 (56%), Positives = 212/307 (69%), Gaps = 51/307 (16%)
Query: 813 IYDTDIEQKSAEERTPD--------TYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQ 864
+ DT +++++ +RT D T L D N GI++ A LE+E+
Sbjct: 783 VPDTAVQKENMIQRTTDLSTSEINYTKLND---NVGIYSVSASN----------LEKELS 829
Query: 865 ILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELAN 924
+L E YLG+E++KLE +AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYME+ N
Sbjct: 830 LLRQEQEYLGNERRKLESHAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEMTN 889
Query: 925 LVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFM----------------------QD 962
LVDGVVTDDSDVFLFGAR+VYKNIFDDRKYVETY M QD
Sbjct: 890 LVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYLMKLKQWEVHVLAGPSTANIVIHFQD 949
Query: 963 IEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDP 1022
IE +LGLTRE+LIRMA+LLGSDYTEGISGIGIVNAIEV +AFPEEDGL KFREW+ESPDP
Sbjct: 950 IESELGLTREQLIRMAMLLGSDYTEGISGIGIVNAIEVAHAFPEEDGLQKFREWVESPDP 1009
Query: 1023 TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMK 1082
T+LGK +++G+SS+K++S D G + + ++ +D QS+ +Q +K
Sbjct: 1010 TLLGKLGMESGSSSKKKKSGRNHSD--------GKGNSLEPEYTKGSDDSQSSNETQRIK 1061
Query: 1083 KIFMDKH 1089
+IFM KH
Sbjct: 1062 EIFMSKH 1068
Score = 273 bits (698), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 197/436 (45%), Positives = 251/436 (57%), Gaps = 65/436 (14%)
Query: 194 EMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQIQA 253
EMI P TG++DPAVLA+LPPSMQLDLLVQMRE++MAENRQKYQK+KK P KFSELQIQ+
Sbjct: 221 EMIFPMTTGDIDPAVLASLPPSMQLDLLVQMRERVMAENRQKYQKIKKEPAKFSELQIQS 280
Query: 254 YLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVEGK 313
YLKTVAFRREIDEVQ+ AAGRGV GVQTS+IASEANREFIFSSSFTGDKQ L
Sbjct: 281 YLKTVAFRREIDEVQRGAAGRGVGGVQTSKIASEANREFIFSSSFTGDKQTLA------- 333
Query: 314 KDEQQQIPSEHPVSDSANNGASIDKSNFSSTDQSNSVTKLGPEESRK--SFADDVETYLD 371
Q+ EH V DS + I+ + F S + ++S + + P S SF DVETY D
Sbjct: 334 ----QRGGKEHIV-DSIKSKREINPAVFKS-NPTSSSSSIKPNNSEPLGSFGPDVETYRD 387
Query: 372 ERGRVRLSKVRAMGIRMTRDLQRNLEMMKEIEQERPNGNNITGAGSMLTLNETGTSKAVP 431
ERGR+R+S+V+AMGIRMTRD+QRNL+ +KE EQ R G++ G L NE +
Sbjct: 388 ERGRIRVSRVKAMGIRMTRDIQRNLDFIKEHEQVRNRGHDSVVEG--LANNE----EPPD 441
Query: 432 SEKRKFIGTSL-------DDTNESVSSIERNKQSTLKSGIS----------LELSFKDNS 474
+ F G L +D +E+ S IS +E+SF D+
Sbjct: 442 FPEHLFEGNGLRSSLHLSEDYDETASDNHHTSSLVGSDKISEGDYHGSKETIEISFADDQ 501
Query: 475 ENNCDDDDDIFAHLAAGKPVIFPNSPRAHSSISVSDSDWEEGTTERKGSSLSDDANAGIN 534
D+DD IF HLA+G + + S ++ +EG E G
Sbjct: 502 TEVKDNDDQIFLHLASGASSNLFTTEQTDGSDCIT----KEGVLE------------GET 545
Query: 535 PPLNLEEG--------GISDESEVEWEEGPSCAPKSSLSFPAESEKTV-SNIEEEANLQE 585
PP+ ++E + E+EWEEG P S + K ++EE+A +QE
Sbjct: 546 PPMQVDEKDHQASLMDNFCTDDEIEWEEGGCDVPGGPSSNENDQSKVPKGDLEEDALVQE 605
Query: 586 AIRRSLLDVCIEKPNY 601
AIRRSL D +KP +
Sbjct: 606 AIRRSLED--FKKPEH 619
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 146/333 (43%), Gaps = 76/333 (22%)
Query: 1087 DKH-TQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDAGQE---VSKSRKKR 1142
+KH TQLR+EAFY+FNERFAKIRSKRIKKA+KGITG +S L D+ + S + KK+
Sbjct: 1134 NKHETQLRMEAFYSFNERFAKIRSKRIKKAIKGITG-KSFLETDELDHDSPSTSNTSKKK 1192
Query: 1143 KNNGLENGNNRSQKAPKKAEESVSGAQNNMEKSSQSQSRERKVLEKFVLAEMENPERLTP 1202
+ G + Q+ K +G Q+ + + V A E+ T
Sbjct: 1193 ERTSSGRGRAKGQRT-KDVGPGNTGNQD------------YDIADSLVDAGEHTTEKST- 1238
Query: 1203 AGGGRNANNVFRGNRRGKGQR--------VGRGRGRRRLCAEQSETSSSDDIGSDDTQEY 1254
+ R AN+ G RGKG+R +G G ++ S +S +D T +Y
Sbjct: 1239 SSKKRTANS--SGGSRGKGRRSMNAAHVIIGNGED-----SDVSNLASDEDSHIRHTNDY 1291
Query: 1255 YSEKFEGQQEVRRSTRSRKPVDYNVDDPEIAD----VGKILSNKESSNEEE--------- 1301
SE +RRS R RK V Y D E D + +I N+ + EE
Sbjct: 1292 ESEGLT----LRRSNRKRKQVTYAEDGQEADDNDVSIHQIDENQGQGSLEEDMCHMAGLD 1347
Query: 1302 AKQDSVHGVTGEASADYSRKKQHRADDPSIDKDYIERGGGFCIDDQEIGQPSVSPCDDPF 1361
+ + +H T E + D + DPS D E GF + E +P
Sbjct: 1348 TQSNLLHQDTSELNIDQTHT------DPS---DMNEDPSGFEL--PEDCHTDTAP----- 1391
Query: 1362 LEAEITKDYMKMGGGFCH---DESETREDQVAA 1391
KDY+ GGGFC DE +T DQ A
Sbjct: 1392 ------KDYLFTGGGFCMEEGDEQDTGVDQSGA 1418
Score = 45.1 bits (105), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 87 EIILPTMGGNVDPAVFAALPPSMQHQLLVR 116
E+I P G++DPAV A+LPPSMQ LLV+
Sbjct: 221 EMIFPMTTGDIDPAVLASLPPSMQLDLLVQ 250
>gi|168010775|ref|XP_001758079.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690535|gb|EDQ76901.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1718
Score = 234 bits (596), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/166 (72%), Positives = 142/166 (85%), Gaps = 5/166 (3%)
Query: 877 QKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV 936
QKK ERNA+SV+SEMFAECQELLQMFGLPY+IAPMEAEAQCA+++ LVDGVVTDD DV
Sbjct: 1032 QKKNERNADSVTSEMFAECQELLQMFGLPYVIAPMEAEAQCAFLDAEKLVDGVVTDDVDV 1091
Query: 937 FLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVN 996
FLFG R+VYKNIFDDRKYVETY+M+D+E +LGL R+KLIRMALLLGSDYTEG+SGIGIVN
Sbjct: 1092 FLFGGRNVYKNIFDDRKYVETYYMKDVETELGLDRDKLIRMALLLGSDYTEGVSGIGIVN 1151
Query: 997 AIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSS 1042
AIEVVNAF E+DGL F+E +ES D ++L + G + KR+ S
Sbjct: 1152 AIEVVNAFDEDDGLKNFKEMVESVDLSLL-----ELGGNGFKRKGS 1192
Score = 196 bits (498), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 142/210 (67%), Gaps = 2/210 (0%)
Query: 195 MILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQIQAY 254
+ LP+ G +DP VLA+LP S+QL+LLVQMREQL+AENR K+QKV K P FS+LQI AY
Sbjct: 234 VYLPSTEGKLDPEVLASLPASVQLELLVQMREQLVAENRHKFQKVAKVPSSFSQLQIDAY 293
Query: 255 LKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVEGKK 314
LKTVAFRR I + QKAAA +GV GV +RIASE NREF+F++S+ GDK LT G
Sbjct: 294 LKTVAFRRGIQDAQKAAAVKGVGGVPVTRIASETNREFVFTTSYQGDKTALTGEG-GGNS 352
Query: 315 DEQQQIPSEHPVSDSANNGASIDKSNFSSTDQSNSVTKLGPEESRKSFADDVETYLDERG 374
P + V A+ +S+ +NF+S + + + S + V+TY+DE+G
Sbjct: 353 ILTSLKPPQPKVQPPASTSSSLLCTNFTSLPINGGALSTDSDVIKNSDS-TVQTYVDEKG 411
Query: 375 RVRLSKVRAMGIRMTRDLQRNLEMMKEIEQ 404
R R+S+VR MG+ MTRDLQ NL +MK++E+
Sbjct: 412 RTRVSRVRGMGVLMTRDLQWNLYLMKDVEK 441
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 1065 ISQFDEDKQSA-EYSQNMKKIFMDKHTQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQ 1123
+ +F K+ A E ++ K + + TQLR++AFY FN+RFAK+RS RI+KA++G TG
Sbjct: 1319 LERFSWPKEKADELLLSVLKEYDRQETQLRMDAFYAFNQRFAKVRSARIQKALRGTTGRL 1378
Query: 1124 SLLLMDDAGQEVSKSRKKRKNNG 1146
S L+D + + ++K+++ G
Sbjct: 1379 SKELVDVSSLDGPPAKKQKQRKG 1401
>gi|298711922|emb|CBJ48609.1| DNA repair enzyme [Ectocarpus siliculosus]
Length = 1835
Score = 213 bits (543), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 175/310 (56%), Gaps = 50/310 (16%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E K +R+AE+V+ EM E +LL++FG+PY++APMEAEAQC +E LVDG VTDDSD
Sbjct: 1289 EGNKAQRDAETVTEEMKEEVMDLLKLFGVPYVVAPMEAEAQCCVLEQLRLVDGTVTDDSD 1348
Query: 936 VFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F FG R+VYKNIF DRK+VE Y + D EKDLG+ ++++ +ALLLGSDYTEG+ G+GIV
Sbjct: 1349 AFAFGGRAVYKNIFSDRKFVEAYLLPDAEKDLGVGTDEVVALALLLGSDYTEGVRGVGIV 1408
Query: 996 NAIEVVNAFPEE-----DGLSKFREWIESPDP---------------------TILGKFD 1029
NA+EV+NAFP E GLSKF++WI+ DP ++ KF
Sbjct: 1409 NAMEVINAFPLEGKGAHHGLSKFKKWIDGFDPLLDQELEGLTKRGSQKEIDGLSLEMKFH 1468
Query: 1030 VQTGASSRKRRSSDG------------------DKDVNYAKNSVGGVSEFDESISQFDED 1071
++ + + DG ++ ++A V G+ + + +D D
Sbjct: 1469 LKHRTARNRWTVPDGFPSEEVINAYNNPQVDRSEEPFSWAAPDVDGLMALCQRVLGWDRD 1528
Query: 1072 KQSAEYSQNMKKIFMDKHTQLRLEAF---YTFNERFAKIRSKRIKKAVKGIT-GSQSLLL 1127
+ +K++ Q R++ + Y N+R A I+SKR++ AV+ + GS ++
Sbjct: 1529 QSDGLLMPMVKELDRGSFAQSRIDRYFMAYHDNKRVAAIKSKRLRTAVEDLAQGSSEVIT 1588
Query: 1128 MDDAGQEVSK 1137
+D G V K
Sbjct: 1589 VD--GSAVGK 1596
Score = 43.1 bits (100), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
Query: 197 LPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQIQAYLK 256
LP ++DP V+A+LP ++ ++ + + +R +Y V P +S+ Q+ +L+
Sbjct: 300 LPERNEDIDPEVIASLPDHVKKQVIEAAKRRQRMRSRAQYMPVAGNPAMYSQTQLSNFLR 359
Query: 257 TVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSS 297
+ +I + QK + + RIASEA R +I + +
Sbjct: 360 SNKLNAQILKAQK----QDDSDRTGKRIASEAGRRYIMTPA 396
>gi|384249049|gb|EIE22531.1| hypothetical protein COCSUDRAFT_6698, partial [Coccomyxa
subellipsoidea C-169]
Length = 262
Score = 203 bits (517), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 165/262 (62%), Gaps = 36/262 (13%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
M+ +CQELLQ+FGLPYIIAP EAEAQCA+++ LVDGVVTDD+DVFLFGA+ VY++IF+
Sbjct: 1 MYGDCQELLQLFGLPYIIAPSEAEAQCAWLDANGLVDGVVTDDNDVFLFGAKHVYRHIFE 60
Query: 951 DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL 1010
+RKYVE Y +D+E++LGL ++ LI +ALLLGSDYTEG++GIGIVNAIE V AF +EDGL
Sbjct: 61 NRKYVEEYRTEDVERELGLDQDGLIALALLLGSDYTEGVAGIGIVNAIETVKAFQKEDGL 120
Query: 1011 SKFREWIESPD------------PTILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGV 1058
KFREW+ +PD P D + RK R+ + ++ + + +
Sbjct: 121 RKFREWVMNPDEAELLAAQEADPPDPYAGDDPEIAEYKRKHRNVRKNWELPASFPDIRVI 180
Query: 1059 SEF-----DESISQFDEDKQSAE---------YSQNMKKI----------FMDKHTQLRL 1094
+ D+S +F + A+ ++ N K+ + + QL +
Sbjct: 181 EAYRKASVDDSKERFTHGRPDAQLLRAFCKEKFNWNADKVDEILEPVLKAYDARQAQLTM 240
Query: 1095 EAFYTFNERFAKIRSKRIKKAV 1116
+ F +FNERFAKI+SKR+ KAV
Sbjct: 241 DNFLSFNERFAKIKSKRLAKAV 262
>gi|255070381|ref|XP_002507272.1| dna-repair protein UVH3 [Micromonas sp. RCC299]
gi|226522547|gb|ACO68530.1| dna-repair protein UVH3 [Micromonas sp. RCC299]
Length = 1108
Score = 195 bits (495), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 156/254 (61%), Gaps = 11/254 (4%)
Query: 842 FATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQM 901
FA A+ +V +E + LE + E+ L E K R A++ + EM+ + Q+LL +
Sbjct: 751 FAVDAMSDVKSENHRQKLETMLDEARKEHALLQSEGKNAARGADTPTEEMYHQIQDLLTL 810
Query: 902 FGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQ 961
FG+PY+IAP EAEAQCA+M LVD V+T+DSD FLFGA +VY+N+F+ +KYVE Y ++
Sbjct: 811 FGVPYVIAPQEAEAQCAWMNSEGLVDAVITEDSDAFLFGASTVYRNVFNTKKYVEVYSVE 870
Query: 962 DIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPD 1021
+I++D+GL R ++ +ALLLGSDYTEGI G+GIVNA+E+ + F DGL+ FR W+E+
Sbjct: 871 NIQRDIGLKRAQMAELALLLGSDYTEGIPGVGIVNALEIASVFSGMDGLTTFRNWVEN-- 928
Query: 1022 PTILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGG--VSEFDESISQFDEDKQSAEYSQ 1079
G Q +R S K AK+ GG VS+ +++I E + + Y Q
Sbjct: 929 ----GDLPDQVNRGNRCLAGSSLPKKHVVAKDGEGGHLVSDKEKNID-LKEGEVANIYLQ 983
Query: 1080 NMKKIFMDKHTQLR 1093
++IF KH R
Sbjct: 984 --REIFKQKHQAAR 995
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 11/123 (8%)
Query: 191 EDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQ 250
E+ E +P + +DP +LA LP SMQ DL++++REQ ENR+ +K+ FSELQ
Sbjct: 197 ENVETEIPVLDA-IDPEMLAKLPASMQFDLMLKIREQRGLENRRNLKKLCANTADFSELQ 255
Query: 251 IQAYLKTVAFRREIDEVQKA----------AAGRGVAGVQTSRIASEANREFIFSSSFTG 300
+ YLK+ + +I+ +K A G +A +S++A+ N +F S T
Sbjct: 256 LSTYLKSSCLKEKIEVARKGFHARSSCWHEAGGSDLAVRASSQVANIYNDDFKASPRVTS 315
Query: 301 DKQ 303
+
Sbjct: 316 SRH 318
>gi|406864117|gb|EKD17163.1| DNA excision repair protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1423
Score = 194 bits (494), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 115/153 (75%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L ++QKK R+A+ V++ M +ECQ LL++FGLPYI APMEAEAQCA + LV
Sbjct: 977 ERELKALRNQQKKDRRDADEVTTVMISECQALLRLFGLPYITAPMEAEAQCAELVNLGLV 1036
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DGVVTDD D+FLFG VYKN+F+ KYVE Y DIEK+L L+R++LI +A LLGSDYT
Sbjct: 1037 DGVVTDDCDIFLFGGTRVYKNMFNSNKYVECYLASDIEKELSLSRDQLIAIAHLLGSDYT 1096
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREWIES 1019
EG+ G+G V AIE+++ FP +DGL +F+EW S
Sbjct: 1097 EGLPGVGPVTAIEILSEFPSKDGLEEFKEWFTS 1129
>gi|367044124|ref|XP_003652442.1| hypothetical protein THITE_2113945 [Thielavia terrestris NRRL 8126]
gi|346999704|gb|AEO66106.1| hypothetical protein THITE_2113945 [Thielavia terrestris NRRL 8126]
Length = 1226
Score = 193 bits (491), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 115/158 (72%)
Query: 861 EEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 920
E + + E L +QKK R+A+ V+ M ECQ LL++FG+PYI APMEAEAQCA +
Sbjct: 841 ENQEAYEQELRALRAQQKKDRRDADEVTQVMITECQALLRLFGIPYITAPMEAEAQCAEL 900
Query: 921 ELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALL 980
NLVDG+VTDDSD+FLFG VYKN+F+ KYVE Y D+E +L L+RE+LI +A L
Sbjct: 901 VRLNLVDGIVTDDSDIFLFGGTRVYKNVFNSNKYVECYLATDLETELSLSREQLISLAQL 960
Query: 981 LGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIE 1018
LGSDYTEG+ G+G V A+E+++ FP DGL++FR+W +
Sbjct: 961 LGSDYTEGLPGVGPVTALEILSEFPGRDGLTEFRDWWQ 998
>gi|400603046|gb|EJP70644.1| DNA excision repair protein [Beauveria bassiana ARSEF 2860]
Length = 1154
Score = 192 bits (487), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 121/165 (73%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
+E +K +E+ + + E L +QKK R+A+ V+ M +ECQ LL++FG+PYI APM
Sbjct: 828 SELNQKSMEQNRRDYEQELRQLRTQQKKDRRDADEVTQVMVSECQSLLRLFGIPYITAPM 887
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTR 971
EAEAQCA + +VDG+VTDDSD FLFG VYKN+F+ K+VE Y ++EKDL L+R
Sbjct: 888 EAEAQCAELVRLGMVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYLGNELEKDLSLSR 947
Query: 972 EKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
++LI +A LLGSDYTEG+ G+G V A+E+++ FP +DGL++FREW
Sbjct: 948 QQLIALAHLLGSDYTEGLPGVGPVTAVEIISEFPGKDGLARFREW 992
>gi|408388533|gb|EKJ68217.1| hypothetical protein FPSE_11684 [Fusarium pseudograminearum CS3096]
Length = 1224
Score = 191 bits (486), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 118/168 (70%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
+E K E+ + + E L +QKK R+A+ V+ M ECQ LL++FG+PY+ APM
Sbjct: 859 SELNNKTAEQNKEDYERELRALRTQQKKDRRDADEVTQVMITECQALLRLFGIPYVTAPM 918
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTR 971
EAEAQCA + LVDG+VTDDSD FLFG VYKN+F+ K+VE Y + DIEK+L LTR
Sbjct: 919 EAEAQCAELVNLGLVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYLVSDIEKELSLTR 978
Query: 972 EKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIES 1019
E+LI +A LLGSDYTEG+ G+G V A+E+++ FP GL+ FREW +S
Sbjct: 979 EQLISLAHLLGSDYTEGLPGVGPVTAVEILSEFPGRSGLNNFREWWKS 1026
>gi|440633177|gb|ELR03096.1| hypothetical protein GMDG_05935 [Geomyces destructans 20631-21]
Length = 1232
Score = 191 bits (484), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 110/150 (73%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L ++QKK R+A+ VS M ECQ LL++FGLPYI APMEAEAQCA + LV
Sbjct: 858 ERELKQLRNQQKKDRRDADEVSHIMVTECQALLRLFGLPYITAPMEAEAQCAELVTLGLV 917
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSDVFLFG VYKN+F+ K+VE Y D+EK+L L R+KLI A LLGSDYT
Sbjct: 918 DGIITDDSDVFLFGGTRVYKNMFNSNKFVECYLASDLEKELSLPRDKLIEFAHLLGSDYT 977
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EG+ GIG V A+E+++ FP DGL +F++W
Sbjct: 978 EGLPGIGPVTALEIISEFPSSDGLQEFKDW 1007
>gi|342878276|gb|EGU79631.1| hypothetical protein FOXB_09914 [Fusarium oxysporum Fo5176]
Length = 1260
Score = 190 bits (483), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 118/168 (70%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
+E K E+ + + E L ++QKK R+A+ V+ M ECQ LL++FG+PYI APM
Sbjct: 868 SELNNKTAEQNKEDYERELRALRNQQKKDRRDADEVTQVMITECQALLRLFGIPYITAPM 927
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTR 971
EAEAQCA + LVDG+VTDDSD FLFG VYKN+F+ K+VE Y + DIEK+L L+R
Sbjct: 928 EAEAQCAELVRLGLVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYLVGDIEKELSLSR 987
Query: 972 EKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIES 1019
E+LI +A LLGSDYTEG+ G+G V A+E+++ FP + GL FREW S
Sbjct: 988 EQLISLAHLLGSDYTEGLPGVGPVTAVEILSEFPGKSGLENFREWWRS 1035
>gi|171687395|ref|XP_001908638.1| hypothetical protein [Podospora anserina S mat+]
gi|170943659|emb|CAP69311.1| unnamed protein product [Podospora anserina S mat+]
Length = 1280
Score = 190 bits (483), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 120/177 (67%), Gaps = 10/177 (5%)
Query: 857 KILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
K E + + E L +QKK R+A+ V+ M ECQ LL++FG+PYI APMEAEAQ
Sbjct: 871 KTQRENQEAYEQELRALRTQQKKDRRDADEVTQVMVTECQALLRLFGVPYITAPMEAEAQ 930
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA + NLVDG+VTDDSD FLFG VYKN+F+ K+VE Y ++D+E +L L+RE+LI
Sbjct: 931 CAELVRLNLVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYLLRDLEDELELSREQLIA 990
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTG 1033
+A LLGSDYTEGI GIG V A+E+++ FP +GLS F+ W E DVQ+G
Sbjct: 991 LAQLLGSDYTEGIPGIGPVTAVEILSEFPGREGLSDFKTWWE----------DVQSG 1037
>gi|402083876|gb|EJT78894.1| DNA-repair protein rad13 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1287
Score = 190 bits (482), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 120/175 (68%)
Query: 842 FATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQM 901
FA+ NV + +T + + + + E L +QK+ R+A+ VS M AECQ+LL++
Sbjct: 844 FASTLNNNVPSGSTAQHEVRDPLLYEQELRQLRAQQKRDLRDADEVSQVMVAECQQLLRL 903
Query: 902 FGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQ 961
FG+PYI APMEAEAQCA + LVDG+VTDDSD FLFG VYKN+F+ K+VE Y
Sbjct: 904 FGIPYITAPMEAEAQCAELVQLGLVDGIVTDDSDTFLFGGTRVYKNMFNGNKFVECYLSS 963
Query: 962 DIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
D+E DL L R +LI +A LLGSDYTEG+ GIG V A+E+++ FP EDGL +F EW
Sbjct: 964 DLEGDLSLGRPQLIALAQLLGSDYTEGLPGIGPVTAVEILSEFPGEDGLKQFAEW 1018
>gi|340517177|gb|EGR47422.1| predicted protein [Trichoderma reesei QM6a]
Length = 1166
Score = 189 bits (480), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 113/150 (75%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L ++QKK R+A+ V+ M AECQ LL++FG+PYI APMEAEAQCA + +V
Sbjct: 843 ERELRALRNQQKKDRRDADEVTQTMIAECQALLRLFGIPYITAPMEAEAQCAELVRLGMV 902
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD FLFG VYKN+F+ K+VE Y D+EK++ L+RE+LI +A LLGSDYT
Sbjct: 903 DGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYIASDLEKEMSLSREQLISLAQLLGSDYT 962
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EG+ G+G V A+E+++ FP +DGL +FREW
Sbjct: 963 EGLPGVGPVTAVEILSEFPGKDGLVQFREW 992
>gi|358390983|gb|EHK40388.1| hypothetical protein TRIATDRAFT_41742 [Trichoderma atroviride IMI
206040]
Length = 1172
Score = 189 bits (479), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 128/195 (65%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
+E K E+ + + E L +QKK R+A+ V+ M ECQ LL++FG+PYI APM
Sbjct: 838 SELNNKSTEQNREDYERELRALRSQQKKDRRDADEVTQTMITECQALLRLFGIPYITAPM 897
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTR 971
EAEAQCA + N+VDG+VTDDSD FLFG VYKN+F+ K+VE Y D++K+L L+R
Sbjct: 898 EAEAQCAELVRLNMVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYVGADLDKELSLSR 957
Query: 972 EKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQ 1031
E+LI +A LLGSDYTEG+ G+G V A+E+++ FP +DGL +FREW ++ K
Sbjct: 958 EQLISLAQLLGSDYTEGLPGVGPVTAVEILSEFPGKDGLDQFREWWRDVQSSVRSKEADA 1017
Query: 1032 TGASSRKRRSSDGDK 1046
+ + RK R S K
Sbjct: 1018 SSSFRRKFRKSQATK 1032
>gi|429853644|gb|ELA28704.1| DNA excision repair protein rad2 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1240
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 115/158 (72%)
Query: 861 EEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 920
E + + E L +QKK R+A+ V+ M ECQ LL++FG+PYI APMEAEAQCA +
Sbjct: 877 ENKEAYERELKALRTQQKKDRRDADEVTQVMVTECQALLRLFGIPYITAPMEAEAQCAEL 936
Query: 921 ELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALL 980
LVDG+VTDDSD FLFG VYKN+F+ K+VE Y D+EK+L L+R++LI +A L
Sbjct: 937 VHLGLVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYLGSDLEKELSLSRDQLIAIAQL 996
Query: 981 LGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIE 1018
LGSDYTEG+ G+G V A+E+++ FP +DGL+KFR+W +
Sbjct: 997 LGSDYTEGLPGVGPVTAVEILSEFPGKDGLAKFRDWWQ 1034
>gi|367019746|ref|XP_003659158.1| hypothetical protein MYCTH_2295852 [Myceliophthora thermophila ATCC
42464]
gi|347006425|gb|AEO53913.1| hypothetical protein MYCTH_2295852 [Myceliophthora thermophila ATCC
42464]
Length = 1244
Score = 188 bits (478), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 113/158 (71%)
Query: 861 EEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 920
E + + E L +QKK R+A+ V+ M ECQ LL +FG+PYI APMEAEAQCA +
Sbjct: 843 ENQEAYERELRALRTQQKKDRRDADEVTQVMVTECQALLTLFGIPYITAPMEAEAQCAEL 902
Query: 921 ELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALL 980
LVDG+VTDDSD FLFG VYKN+F+ KYVE Y +D+E +L L+RE+LI +A L
Sbjct: 903 VRLGLVDGIVTDDSDTFLFGGTRVYKNMFNSNKYVECYLAKDLETELSLSREQLIALAQL 962
Query: 981 LGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIE 1018
LGSDYTEG+ G+G V A+E+++ FP DGL++FR+W +
Sbjct: 963 LGSDYTEGLPGVGPVTALEILSEFPGRDGLAEFRDWWQ 1000
>gi|310790037|gb|EFQ25570.1| DNA excision repair protein [Glomerella graminicola M1.001]
Length = 1271
Score = 188 bits (477), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/158 (53%), Positives = 114/158 (72%)
Query: 861 EEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 920
E + + E L +QKK R+A+ V+ M ECQ LL++FG+PYI APMEAEAQCA +
Sbjct: 905 ENKEAYERELKALRTQQKKDRRDADEVTQVMVTECQALLRLFGIPYITAPMEAEAQCAEL 964
Query: 921 ELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALL 980
LVDG+VTDDSD FLFG +YKN+F+ K+VE Y D+EK+L L+RE+LI +A L
Sbjct: 965 VQLGLVDGIVTDDSDCFLFGGTRIYKNMFNSNKFVECYLSSDLEKELSLSREQLIAIAQL 1024
Query: 981 LGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIE 1018
LGSDYTEG+ G+G V A+E+++ FP +DGL +F+EW +
Sbjct: 1025 LGSDYTEGLPGVGPVTAVEILSEFPGKDGLDRFKEWWQ 1062
>gi|301121670|ref|XP_002908562.1| DNA repair protein, putative [Phytophthora infestans T30-4]
gi|262103593|gb|EEY61645.1| DNA repair protein, putative [Phytophthora infestans T30-4]
Length = 483
Score = 187 bits (476), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 121/166 (72%), Gaps = 8/166 (4%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
R+AE ++ +M AE LL++FG+P++++PMEAEAQCA +E LVDGV+TDDSD+F FG
Sbjct: 186 RDAEGITDDMVAEVMSLLRLFGVPFLVSPMEAEAQCAALEQLGLVDGVITDDSDIFPFGG 245
Query: 942 RSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+ VYKNIF +K+VE + +DIE++LG +RE++I +ALLLGSDYT+G+ GIGIVNA E+
Sbjct: 246 QRVYKNIFHHQKFVEAFSARDIEQELGFSREQIIALALLLGSDYTDGVRGIGIVNATEIA 305
Query: 1002 NAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKD 1047
A+P+ +GL +F++W+ G+F+V A K S GD D
Sbjct: 306 AAYPKIEGLREFKDWV--------GEFNVAEEAQRGKEDESGGDSD 343
>gi|308810128|ref|XP_003082373.1| 5'-3' exonuclease (ISS) [Ostreococcus tauri]
gi|116060841|emb|CAL57319.1| 5'-3' exonuclease (ISS), partial [Ostreococcus tauri]
Length = 987
Score = 187 bits (476), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/315 (37%), Positives = 167/315 (53%), Gaps = 56/315 (17%)
Query: 859 LEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
+EEE Q+L+ E+ ++ + AE V+ EM+ + QELL +FG+PYIIAP EAEAQCA
Sbjct: 598 VEEERQMLELEH-------RQATKAAEQVTDEMYRDVQELLTLFGIPYIIAPQEAEAQCA 650
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMA 978
Y+ LVD V+TDDSDVFLFGA VY+N F D+KY E Y I KD+GL R + I++A
Sbjct: 651 YLNEQKLVDAVITDDSDVFLFGASLVYRNFFQDKKYCEVYSADRIRKDIGLDRNRFIQLA 710
Query: 979 LLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIESPDPTILGKFDVQTGASS 1036
LLLGSDYTEG+SGIGIVNA+E+V+AF + + F+EW++ + T++ + + S
Sbjct: 711 LLLGSDYTEGVSGIGIVNALEIVSAFRGDVIEASKAFKEWVDLEELTMVPDHLLPNPSPS 770
Query: 1037 R-------------------KRRSSDGDKDVNYAKNSVGGVSEF-----DESISQFDEDK 1072
+ K RS DV S+ V + D S F+ K
Sbjct: 771 KSKNISDDGTEQSLAEAFKEKHRSLKKSWDVPENFPSIEVVKAYQNPSVDRSEEPFEWGK 830
Query: 1073 QSA-------------------EYSQNMKKIFMDKHTQLRLEAFY----TFNERFAKIRS 1109
+ + M K + ++ Q R+++F+ R AK RS
Sbjct: 831 PDVDLLRLYCVKNFAWTRDATDQVLEPMMKAWEERDAQRRIDSFFETTAAVGGRVAKYRS 890
Query: 1110 KRIKKAVKGITGSQS 1124
KR+ AV +T +S
Sbjct: 891 KRLGDAVAKLTNRKS 905
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 13/156 (8%)
Query: 203 NVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRR 262
++DP VL+ALPPS++L+++ ++R++ MA+NR+ + + ++FS LQ++ YLK +R
Sbjct: 142 DIDPEVLSALPPSVRLEVIAKIRDRRMADNREHFAEASGKMQEFSRLQLETYLKGTKLKR 201
Query: 263 EIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVEGKKDEQQ-QIP 321
ID V + + + + R+A++ NREFI+S S ++G + E+ +P
Sbjct: 202 RIDAVMQRSDASDPS--TSKRVAAQDNREFIYSG----------PSSLDGARAERALALP 249
Query: 322 SEHPVSDSANNGASIDKSNFSSTDQSNSVTKLGPEE 357
S P + A S S + + P+E
Sbjct: 250 SPSPAALDAGAFGSNQLSGVRTGRARTQAALIAPQE 285
>gi|346321714|gb|EGX91313.1| DNA excision repair protein Rad2 [Cordyceps militaris CM01]
Length = 1162
Score = 187 bits (475), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 118/167 (70%)
Query: 853 EATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPME 912
E +K +E+ + + E L +QKK R+A+ V+ M +ECQ LL++FG+PYI APME
Sbjct: 833 ELNQKSMEQNRRDYEQELRQLRTQQKKDRRDADEVTQVMVSECQSLLRLFGIPYITAPME 892
Query: 913 AEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTRE 972
AEAQCA + +VDG+VTDDSD FLFG VYKN+F+ K+VE Y ++EKDL L+R+
Sbjct: 893 AEAQCAELVRLGMVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYIGSELEKDLSLSRQ 952
Query: 973 KLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIES 1019
+LI +A LLGSDYTEG+ G+G V A+E+++ FP DGL FR W ++
Sbjct: 953 QLISLAHLLGSDYTEGLPGVGPVTAVEILSEFPGRDGLGHFRAWWDA 999
>gi|322712027|gb|EFZ03600.1| XPG domain containing protein [Metarhizium anisopliae ARSEF 23]
Length = 1191
Score = 187 bits (474), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/287 (40%), Positives = 165/287 (57%), Gaps = 30/287 (10%)
Query: 755 THEDKKNNCEAETSVLPG-DKKNEIEVEMKHDFT-AEPSCRTVGT---SDTSIPLVK--- 806
T ED K+ AE S+ PG K+E M D AEP+ T G +D+S PL +
Sbjct: 727 TFEDVKSPPAAENSLSPGLGNKSESPEPMFEDVPPAEPTITTPGKPTENDSSSPLFEDVP 786
Query: 807 -------------TSGNASIYDTDIEQKS-AEERTPDTYLKDSKQNTGIFATKAIENVHA 852
T + D + E+ S E+ + + + FA++ + N A
Sbjct: 787 SVHPPASSTANPATEADDPFADIEYEEFSDPEDEELMAQMAEEAEEHARFASE-LNNKSA 845
Query: 853 EATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPME 912
+ + E+E++ L ++QKK R+A+ V+ M ECQ LL++FG+PYI APME
Sbjct: 846 QQNREDYEKELR-------QLRNQQKKDRRDADEVTQVMVTECQALLRLFGIPYITAPME 898
Query: 913 AEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTRE 972
AEAQCA + +VDG+VTDDSD FLFG VYKN+F+ K+VE Y +D+EK+L L+R+
Sbjct: 899 AEAQCAELVKLGIVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYIGKDLEKELSLSRD 958
Query: 973 KLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIES 1019
+LI +A LLGSDYTEG+ G+G V A+E+++ FP + GL FREW S
Sbjct: 959 QLISLAQLLGSDYTEGLPGVGPVTAVEILSEFPGKSGLENFREWWTS 1005
>gi|358387657|gb|EHK25251.1| hypothetical protein TRIVIDRAFT_208179 [Trichoderma virens Gv29-8]
Length = 1196
Score = 187 bits (474), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 112/150 (74%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L ++QKK R+A+ V+ M ECQ LL++FG+PYI APMEAEAQCA + +V
Sbjct: 875 ERELRALRNQQKKDRRDADEVTQTMITECQALLRLFGIPYITAPMEAEAQCAELVRLGMV 934
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD FLFG VYKN+F+ K+VE Y D++K++ L+RE+LI +A LLGSDYT
Sbjct: 935 DGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYVGADLDKEMSLSREQLISLAQLLGSDYT 994
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EG+ G+G V A+E+++ FP +DGL KFREW
Sbjct: 995 EGLPGVGPVTAVEILSEFPGKDGLEKFREW 1024
>gi|407928397|gb|EKG21254.1| Xeroderma pigmentosum group G protein [Macrophomina phaseolina MS6]
Length = 1302
Score = 186 bits (473), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 127/198 (64%), Gaps = 15/198 (7%)
Query: 842 FATKAIENVHAEATEKILEEEMQILDHE--YMYLGDEQKKLERNAESVSSEMFAECQELL 899
AT+A E+ +T +E+ +D+E L +QKK R+A+ V+ M AECQ+LL
Sbjct: 873 LATEAEEHARFASTLNNKSQEVNAIDYERELKALRTQQKKDRRDADEVTQTMIAECQQLL 932
Query: 900 QMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYF 959
+FGLPYI APMEAEAQCA + LVDG+VTDDSD+FLFG VYKN+F+ K+VE Y
Sbjct: 933 SLFGLPYITAPMEAEAQCAELVDLGLVDGIVTDDSDIFLFGGTRVYKNMFNQAKFVECYL 992
Query: 960 MQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIES 1019
QD+E + GLTR KLI +A LLGSDYTEGI G+G V A+E+++ F + L FR+W
Sbjct: 993 SQDLESEFGLTRRKLIAIAQLLGSDYTEGIPGVGPVTALEILSEFGD---LESFRDWWR- 1048
Query: 1020 PDPTILGKFDVQTGASSR 1037
DVQ+G R
Sbjct: 1049 ---------DVQSGTRPR 1057
>gi|348681509|gb|EGZ21325.1| hypothetical protein PHYSODRAFT_455731 [Phytophthora sojae]
Length = 502
Score = 186 bits (473), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/189 (47%), Positives = 129/189 (68%), Gaps = 14/189 (7%)
Query: 873 LGD--EQKKLE----RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+GD E KKL R+ E ++ +M AE LL++FG+P++++PMEAEAQCA +E LV
Sbjct: 185 IGDTLELKKLRSRQLRDTEGITDDMVAEVMALLRLFGVPFLVSPMEAEAQCAALEQLGLV 244
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DGV+TDDSD+F FG + VYKNIF +K+VE + +DIE++LG +RE++I +ALLLGSDYT
Sbjct: 245 DGVITDDSDIFPFGGQRVYKNIFHHQKFVEAFSARDIERELGFSREQIIALALLLGSDYT 304
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDK 1046
+G+ GIGIVNA E+ A+P +GL +F+EW+ +FDV A + DGD
Sbjct: 305 DGVRGIGIVNATEIAAAYPGIEGLREFKEWVR--------EFDVAKEAERKTGEELDGDS 356
Query: 1047 DVNYAKNSV 1055
+ N ++ V
Sbjct: 357 EGNSEEDDV 365
>gi|347833577|emb|CCD49274.1| similar to DNA excision repair protein [Botryotinia fuckeliana]
Length = 1341
Score = 186 bits (473), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 85/144 (59%), Positives = 108/144 (75%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++QKK R+A+ VS M ECQ LL++FG+PYI APMEAEAQCA + LVDG+VTD
Sbjct: 915 LRNQQKKDRRDADEVSHIMITECQALLRLFGIPYITAPMEAEAQCAELVRLGLVDGIVTD 974
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD+FLFG VYKN+F+ K VE Y D+EK+L L+RE+LI +A LLGSDYTEGI GI
Sbjct: 975 DSDIFLFGGTRVYKNLFNSNKLVECYLSSDLEKELSLSREQLISIAHLLGSDYTEGIPGI 1034
Query: 993 GIVNAIEVVNAFPEEDGLSKFREW 1016
G V A+E+++ FP GL +F+EW
Sbjct: 1035 GPVTAVEILSEFPSHAGLEEFKEW 1058
>gi|443897481|dbj|GAC74821.1| 5'-3' exonuclease [Pseudozyma antarctica T-34]
Length = 1544
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 146/262 (55%), Gaps = 29/262 (11%)
Query: 773 DKKNEIEVEMKHDFTAEPSCRTVGTSDTSIPLVKTSGNASIYDTDIEQKSAEERTPDTYL 832
D++ VE + EP +G +P S D DI + SA++ +L
Sbjct: 957 DERQTTPVEWSPTPSPEPEEVAIGADGFPLPTAAELDALSASDDDIARLSADQSEFVAFL 1016
Query: 833 KDSKQNTGIFATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMF 892
+K + +L+ + Q+ + E L E R+ E ++ +M
Sbjct: 1017 SATKGRS------------------LLDVQQQV-ESEVNALRAEFANSRRSEEDITKQMA 1057
Query: 893 AECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDR 952
E Q +L++FGLPYI APMEAEAQCA + LVDG++TDDSDVFLFG +YKN+F++
Sbjct: 1058 QEIQMMLRLFGLPYITAPMEAEAQCAELVSRRLVDGIITDDSDVFLFGGTRIYKNMFNNN 1117
Query: 953 KYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSK 1012
+ VE + + D++++LGL REKL+R+A LGSDYTEG++G+G V A+E++ FP EDGL K
Sbjct: 1118 RIVECFLLSDMQRELGLDREKLVRLAYYLGSDYTEGLAGVGPVVAMELLALFPGEDGLLK 1177
Query: 1013 FREWIESPDPTILGKFDVQTGA 1034
FREW VQTGA
Sbjct: 1178 FREWW----------MRVQTGA 1189
>gi|322694710|gb|EFY86532.1| DNA excision repair protein Rad2 [Metarhizium acridum CQMa 102]
Length = 1168
Score = 185 bits (470), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 118/168 (70%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
+E K ++ Q + E L ++QKK R+A+ V+ M ECQ LL++FG+PYI APM
Sbjct: 837 SELNNKSAQQNRQDYEKELRQLRNQQKKDRRDADEVTQVMITECQALLRLFGIPYITAPM 896
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTR 971
EAEAQCA + +VDG+VTDDSD FLFG VYKN+F+ K+VE Y +D+EK+L L+R
Sbjct: 897 EAEAQCAELVRLGIVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYISKDLEKELSLSR 956
Query: 972 EKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIES 1019
++LI +A LLGSDYTEG+ G+G V A+E+++ FP + GL FREW S
Sbjct: 957 DQLISLAQLLGSDYTEGLPGVGPVTAVEILSEFPGKSGLEDFREWWTS 1004
>gi|380474820|emb|CCF45572.1| DNA-repair protein rad13 [Colletotrichum higginsianum]
Length = 622
Score = 185 bits (470), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 114/158 (72%)
Query: 861 EEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 920
E + + E L +QKK R+A+ V+ M ECQ LL++FG+PYI APMEAEAQCA +
Sbjct: 254 ENKEAYERELKALRTQQKKDRRDADEVTQVMVTECQALLRLFGIPYITAPMEAEAQCAEL 313
Query: 921 ELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALL 980
+LVDG+VTDDSD FLFG +YKN+F+ K+VE Y D+EK+L L+RE+LI +A L
Sbjct: 314 VRMSLVDGIVTDDSDCFLFGGTRIYKNMFNSNKFVECYLGSDLEKELSLSREQLIAIAQL 373
Query: 981 LGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIE 1018
LGSDYTEG+ G+G V A+E+++ F +DGL +F+EW +
Sbjct: 374 LGSDYTEGLPGVGPVTAVEILSEFTGKDGLERFKEWWQ 411
>gi|85116383|ref|XP_965045.1| hypothetical protein NCU07498 [Neurospora crassa OR74A]
gi|28926846|gb|EAA35809.1| hypothetical protein NCU07498 [Neurospora crassa OR74A]
Length = 1269
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 121/179 (67%), Gaps = 10/179 (5%)
Query: 857 KILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
K +E + E L +Q+K R+A+ V+ M ECQ LL+ FG+PYI APMEAEAQ
Sbjct: 846 KTFQENQAAYEQELKALRTQQRKDRRDADEVTQIMITECQALLRFFGIPYITAPMEAEAQ 905
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA + LVDG+VTDDSD FLFG VYKN+F+ K+VE Y DIE+DL L+R++LI
Sbjct: 906 CAELVRLGLVDGIVTDDSDTFLFGGTRVYKNMFNGNKFVECYLSSDIERDLSLSRDQLIA 965
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE----DGLSKFREW---IES---PDPTIL 1025
+A LLGSDYTEG+SG+G V A+E+++ FP E L+ F+EW I+S PDP++L
Sbjct: 966 LAQLLGSDYTEGLSGVGPVTAVEILSEFPPEPTPISSLTTFKEWWTKIQSSPQPDPSLL 1024
>gi|340923811|gb|EGS18714.1| putative DNA repair protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1238
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 113/162 (69%), Gaps = 2/162 (1%)
Query: 857 KILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
K + E Q + E L +QK+ R+A+ V+ M +ECQ LLQ+FG+PYI APMEAEAQ
Sbjct: 846 KSVRENQQDYEQELRSLRSQQKRDRRDADEVTQVMISECQTLLQLFGIPYITAPMEAEAQ 905
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA + LVDG+VTDDSD FLFG VYKN+F+ KYVE Y +IE +L L+RE+LI
Sbjct: 906 CAELVRLGLVDGIVTDDSDTFLFGGTRVYKNVFNSNKYVECYLASEIESELSLSREQLIS 965
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEED--GLSKFREW 1016
+ALLLGSDYTEG+ G+G V A+E+++ FP D L +F EW
Sbjct: 966 LALLLGSDYTEGLPGVGPVTALEILSHFPPGDKQALIQFAEW 1007
>gi|164663201|ref|XP_001732722.1| hypothetical protein MGL_0497 [Malassezia globosa CBS 7966]
gi|159106625|gb|EDP45508.1| hypothetical protein MGL_0497 [Malassezia globosa CBS 7966]
Length = 1109
Score = 184 bits (468), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 75/134 (55%), Positives = 107/134 (79%)
Query: 885 ESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSV 944
E ++ +M AE Q LL++FGLPY+ APMEAEAQCA + + +LVDG++TDDSDVFLFG V
Sbjct: 775 EEITQQMTAEIQALLRIFGLPYLTAPMEAEAQCAQLAMQHLVDGIITDDSDVFLFGGTPV 834
Query: 945 YKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
Y+N+F++R+ VE Y+M D+ ++LGL+RE+LI++A LLGSDYTEG+ G+G V A+E+++ F
Sbjct: 835 YRNMFNNRRSVECYWMNDMHRELGLSRERLIQLAFLLGSDYTEGLPGVGPVLAMEILSLF 894
Query: 1005 PEEDGLSKFREWIE 1018
P + L FREW +
Sbjct: 895 PGDYALVHFREWWQ 908
>gi|336463192|gb|EGO51432.1| hypothetical protein NEUTE1DRAFT_70166 [Neurospora tetrasperma FGSC
2508]
gi|350297610|gb|EGZ78587.1| PIN domain-like protein [Neurospora tetrasperma FGSC 2509]
Length = 1269
Score = 184 bits (468), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/179 (50%), Positives = 120/179 (67%), Gaps = 10/179 (5%)
Query: 857 KILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
K +E + E L +Q+K R+A+ V+ M ECQ LL+ FG+PYI APMEAEAQ
Sbjct: 849 KTFQENQAAYEQELKALRTQQRKDRRDADEVTQIMITECQALLRFFGIPYITAPMEAEAQ 908
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA + LVDG+VTDDSD FLFG VYKN+F+ K+VE Y DIE+DL L+R++LI
Sbjct: 909 CAELVRLGLVDGIVTDDSDTFLFGGTRVYKNMFNGNKFVECYLSSDIERDLSLSRDQLIA 968
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE----DGLSKFREW---IES---PDPTIL 1025
+A LLGSDYTEG+SG+G V A+E+++ FP E L+ F+EW I+S PDP +L
Sbjct: 969 LAQLLGSDYTEGLSGVGPVTAVEILSEFPPEPTPISSLTTFKEWWTKIQSSPQPDPALL 1027
>gi|389642679|ref|XP_003718972.1| DNA-repair protein rad13 [Magnaporthe oryzae 70-15]
gi|351641525|gb|EHA49388.1| DNA-repair protein rad13 [Magnaporthe oryzae 70-15]
gi|440472732|gb|ELQ41574.1| DNA-repair protein rad13 [Magnaporthe oryzae Y34]
gi|440485125|gb|ELQ65111.1| DNA-repair protein rad13 [Magnaporthe oryzae P131]
Length = 1269
Score = 184 bits (467), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 116/163 (71%), Gaps = 4/163 (2%)
Query: 854 ATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEA 913
AT + +EE + E L +QKK R+A+ VS M ECQ+LL++FG+PY+ APMEA
Sbjct: 880 ATAQSVEE----YEKELKQLRAQQKKDRRDADEVSQVMVTECQQLLRLFGIPYVTAPMEA 935
Query: 914 EAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREK 973
EAQCA + LVDG+VTDDSD FLFG VYKN+F+ K+VE Y D+EK+L L++E
Sbjct: 936 EAQCAELVRLGLVDGIVTDDSDTFLFGGTRVYKNMFNGNKFVECYLASDLEKELSLSQEN 995
Query: 974 LIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
LI +A LLGSDYT+G+ G+G V A+E+++ FP DGLS+F +W
Sbjct: 996 LISLAQLLGSDYTDGLPGVGPVTAVEILSEFPGPDGLSRFADW 1038
>gi|449019441|dbj|BAM82843.1| probable excision repair protein ERCC5 [Cyanidioschyzon merolae
strain 10D]
Length = 1117
Score = 184 bits (467), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/324 (35%), Positives = 170/324 (52%), Gaps = 63/324 (19%)
Query: 853 EATEKILEEEMQILDHEYMYLG---DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIA 909
+ATE+ E M +HE M L E R+A+SV+ +MFA+ + LLQ+ G+PYI A
Sbjct: 727 DATERQRMEPM-FAEHEEMDLAKLRSEYAAAARHADSVTEQMFADTKRLLQLLGIPYIEA 785
Query: 910 PMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGL 969
MEAEAQCA+++ A +VD VVT+DSD FLFGA VY++IF+D KYVE Y M IE+++GL
Sbjct: 786 AMEAEAQCAFLDRAGIVDAVVTEDSDAFLFGASRVYRHIFEDSKYVEEYEMNRIERNMGL 845
Query: 970 TREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF------------PEED---GLSKFR 1014
+R+KLI + LLLGSDY++G+ G+GIVNA E+V AF PE + GL FR
Sbjct: 846 SRDKLICLGLLLGSDYSDGVYGVGIVNATEIVEAFCRDPDPACPDTSPEREPFRGLQDFR 905
Query: 1015 EWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKN--------------------- 1053
EW+ D LG D + + RR++ +N +N
Sbjct: 906 EWL---DAVHLGD-DPASVSDPEPRRAAFKKLHINMKRNWNLLDKTFPNRHVIEAFLRPQ 961
Query: 1054 --------------SVG----GVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLE 1095
+ G + F + +D K ++ + Q R++
Sbjct: 962 VDTSWLHRRRELFPNCGPDPVALRAFCHDLFGWDSAKLEQALGPVVQAFQRHRERQTRID 1021
Query: 1096 AFYTFNERFAKIRSKRIKKAVKGI 1119
+F+ RFA+IRS R++ AV+ +
Sbjct: 1022 SFFQ-PHRFARIRSTRLQNAVRKL 1044
Score = 50.8 bits (120), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Query: 187 EDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVK--KAPE 244
+DG E LP + N+D + ALP S+Q +++ +R ++ E + + + ++P
Sbjct: 217 DDGSNCEAFELPDLE-NIDADAVVALPASVQKEIIASIRRRMHTELVETVENLDELRSPS 275
Query: 245 KFSELQIQAYLKTVAFRREI-DEVQKAAAGRGVAGVQTSRIASEANREFIF 294
FS+LQ+ +L+T R ++ D Q+A+ G + R+AS+A RE++
Sbjct: 276 DFSQLQVDRFLRTSQLRSKLRDARQRASHGTHLG----RRLASDATREYVL 322
>gi|299749580|ref|XP_001836208.2| flap structure-specific endonuclease [Coprinopsis cinerea
okayama7#130]
gi|298408502|gb|EAU85580.2| flap structure-specific endonuclease [Coprinopsis cinerea
okayama7#130]
Length = 1200
Score = 184 bits (467), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 113/151 (74%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L +++ R+AE V+ +M ++ +L++FG+PYI APMEAEAQCA + L
Sbjct: 771 IDEEIATLNQQKRNAMRDAEDVNQQMISQIMTMLRLFGIPYITAPMEAEAQCAELTSLGL 830
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDGV+TDDSDVFLFGA V+KN+F+ K VE + + D+E++LGL R+ LI++A LLGSDY
Sbjct: 831 VDGVITDDSDVFLFGASRVFKNMFNQSKTVECFLLSDLERELGLDRDTLIQLAYLLGSDY 890
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
TEG++G+G V A+E+V FP +DGL KF+EW
Sbjct: 891 TEGLAGVGPVVAMELVREFPGKDGLWKFKEW 921
>gi|453088882|gb|EMF16922.1| PIN domain-like protein [Mycosphaerella populorum SO2202]
Length = 1387
Score = 184 bits (466), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 110/150 (73%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L ++QKK R+A+ V+ M ECQ LL++FGLPY+ APMEAEAQCA + LV
Sbjct: 1012 ERELKQLRNQQKKDRRDADEVTQTMIQECQALLRLFGLPYVTAPMEAEAQCAELVHLGLV 1071
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD FLFG +YKN+F+ K+VE Y D+EK+ GLTR+KLI +A LLGSDYT
Sbjct: 1072 DGIVTDDSDCFLFGGTRIYKNMFNQAKFVECYLTSDLEKEFGLTRQKLIAVANLLGSDYT 1131
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EG+ G+G V A+E+++ FP+ L +F+EW
Sbjct: 1132 EGVPGVGPVTALEIISEFPD---LEEFKEW 1158
>gi|302927330|ref|XP_003054474.1| hypothetical protein NECHADRAFT_65808 [Nectria haematococca mpVI
77-13-4]
gi|256735415|gb|EEU48761.1| hypothetical protein NECHADRAFT_65808 [Nectria haematococca mpVI
77-13-4]
Length = 1192
Score = 184 bits (466), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 115/165 (69%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
+E K E+ + + E L +QKK R+A+ V+ M ECQ LL++FG+PYI APM
Sbjct: 828 SELNNKSAEQNKEDYERELRALRGQQKKDRRDADEVTQVMITECQALLRLFGIPYITAPM 887
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTR 971
EAEAQCA + LVDG+VTDDSD FLFG VYKN+F+ K+VE Y D+EK+L L+R
Sbjct: 888 EAEAQCAELVQLGLVDGIVTDDSDTFLFGGTRVYKNMFNSNKFVECYLGGDLEKELSLSR 947
Query: 972 EKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
E+LI +A LLGSDYTEG+ G+G V A+E+++ FP + GL FR+W
Sbjct: 948 EQLISLAQLLGSDYTEGLPGVGPVTAVEILSEFPGKSGLEDFRDW 992
>gi|452987544|gb|EME87299.1| hypothetical protein MYCFIDRAFT_147956 [Pseudocercospora fijiensis
CIRAD86]
Length = 1298
Score = 182 bits (462), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/174 (50%), Positives = 115/174 (66%), Gaps = 3/174 (1%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L ++QKK R+A+ V+ M ECQ LL++FGLPYI APMEAEAQCA + LV
Sbjct: 914 EKELKQLRNQQKKDRRDADEVTQTMIQECQALLRLFGLPYITAPMEAEAQCAELVHLGLV 973
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD FLFG VYKN+F+ K+VE Y D+EK+ LTREKLI +A LLGSDYT
Sbjct: 974 DGIVTDDSDCFLFGGTRVYKNMFNQAKFVECYLTSDLEKEFDLTREKLISIAQLLGSDYT 1033
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRR 1040
EG+ G+G V A+E+++ FP+ L F++W ++ K Q RK R
Sbjct: 1034 EGLHGVGAVTALEIISEFPD---LEAFKQWWTGVQTAVIPKSADQEHPFRRKFR 1084
>gi|320586182|gb|EFW98861.1| DNA excision repair protein rad2 [Grosmannia clavigera kw1407]
Length = 1287
Score = 182 bits (462), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/178 (48%), Positives = 119/178 (66%), Gaps = 10/178 (5%)
Query: 861 EEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 920
E + + E L ++QKK R+A+ V+ M +ECQ LL++FG+PYI APMEAEAQC+ +
Sbjct: 876 ESQAVFEQEVKALRNQQKKDRRDADEVTMVMVSECQALLRLFGIPYITAPMEAEAQCSEL 935
Query: 921 ELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALL 980
LVDG+VTDDSD FLFG VYKN+F+ K+VE + D+EK++ L+REKLI +A L
Sbjct: 936 VSLGLVDGIVTDDSDTFLFGGTRVYKNMFNGNKFVECFLAADLEKEMSLSREKLISLAQL 995
Query: 981 LGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK 1038
LGSDYT+G+ G+G V A+E+++ FP GL +FR W + DVQ SR+
Sbjct: 996 LGSDYTDGLPGVGPVTAMEILSEFPGPQGLEEFRTWWD----------DVQMHGRSRE 1043
>gi|409077739|gb|EKM78104.1| hypothetical protein AGABI1DRAFT_61094 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1128
Score = 182 bits (461), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 114/151 (75%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L D++K R++E ++ +M ++ +L++FG+PYI APMEAEAQCA + L
Sbjct: 728 IDDEIKILNDQRKAAMRDSEDITQQMISQIMTMLRLFGIPYITAPMEAEAQCAELVSLGL 787
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDGV+TDDSDVFLFGA+ VYKN+F+ K VE + + D+E++LGL R+ L+R+A LLGSDY
Sbjct: 788 VDGVITDDSDVFLFGAQRVYKNMFNQSKTVELFLLSDLERELGLDRDTLVRLAYLLGSDY 847
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
T+G+SG+G V A+E++ FP ++GL +F +W
Sbjct: 848 TDGLSGVGPVVAMELLKEFPNKEGLHRFADW 878
>gi|303310363|ref|XP_003065194.1| XPG N-terminal domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240104854|gb|EER23049.1| XPG N-terminal domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 1143
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 108/150 (72%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M AECQ+LL++FGLPY+ APMEAEAQCA + LV
Sbjct: 792 ERELKQLRAQQKKDRRDADEVSQIMVAECQQLLKLFGLPYVTAPMEAEAQCAELVSLGLV 851
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD+FLFG +YKN+F+ K+VE Y D+EK+ L R+KLI A LLGSDYT
Sbjct: 852 DGIVTDDSDIFLFGGTRIYKNMFNQAKFVECYLASDLEKEYSLDRKKLISFAHLLGSDYT 911
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ FP GL +FR+W
Sbjct: 912 EGIPGIGPVTALEILTEFP---GLEEFRDW 938
>gi|406604494|emb|CCH44056.1| DNA repair protein [Wickerhamomyces ciferrii]
Length = 1010
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/145 (58%), Positives = 109/145 (75%), Gaps = 3/145 (2%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L D+QK+ R+++ V+ M E QELL FG+PYI APMEAEAQCA + NLVDG++TD
Sbjct: 725 LRDQQKRDLRDSDEVTVTMIKEVQELLARFGIPYITAPMEAEAQCAELLQLNLVDGIITD 784
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG VYKN+F ++ YVE Y QDIE++LGLTR+KLI +A LLGSDYTEG+ GI
Sbjct: 785 DSDVFLFGGGKVYKNMFHEKHYVEFYSSQDIERELGLTRQKLIEIAQLLGSDYTEGLKGI 844
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWI 1017
G VNA+E+++ F + L+ FR W
Sbjct: 845 GPVNAMEILSHFGD---LTNFRNWF 866
>gi|320033898|gb|EFW15844.1| DNA excision repair protein [Coccidioides posadasii str. Silveira]
Length = 1143
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 108/150 (72%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M AECQ+LL++FGLPY+ APMEAEAQCA + LV
Sbjct: 792 ERELKQLRAQQKKDRRDADEVSQIMVAECQQLLKLFGLPYVTAPMEAEAQCAELVSLGLV 851
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD+FLFG +YKN+F+ K+VE Y D+EK+ L R+KLI A LLGSDYT
Sbjct: 852 DGIVTDDSDIFLFGGTRIYKNMFNQAKFVECYLASDLEKEYSLDRKKLISFAHLLGSDYT 911
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ FP GL +FR+W
Sbjct: 912 EGIPGIGPVTALEILTEFP---GLEEFRDW 938
>gi|426199083|gb|EKV49008.1| hypothetical protein AGABI2DRAFT_217997 [Agaricus bisporus var.
bisporus H97]
Length = 1160
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 114/151 (75%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L D++K R++E ++ +M ++ +L++FG+PYI APMEAEAQCA + L
Sbjct: 760 IDDEIKILNDQRKAAMRDSEDITQQMISQIMTMLRLFGIPYITAPMEAEAQCAELVSLGL 819
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDGV+TDDSDVFLFGA+ VYKN+F+ K VE + + D+E++LGL R+ L+R+A LLGSDY
Sbjct: 820 VDGVITDDSDVFLFGAQRVYKNMFNQSKTVELFLLSDLERELGLDRDTLVRLAYLLGSDY 879
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
T+G+SG+G V A+E++ FP ++GL +F +W
Sbjct: 880 TDGLSGVGPVVAMELLKEFPNKEGLHRFADW 910
>gi|119178413|ref|XP_001240880.1| hypothetical protein CIMG_08043 [Coccidioides immitis RS]
gi|392867161|gb|EAS29637.2| DNA excision repair protein (rad2) [Coccidioides immitis RS]
Length = 1142
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 108/150 (72%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M AECQ+LL++FGLPY+ APMEAEAQCA + LV
Sbjct: 791 ERELKQLRAQQKKDRRDADEVSQIMVAECQQLLKLFGLPYVTAPMEAEAQCAELVSLGLV 850
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD+FLFG +YKN+F+ K+VE Y D+EK+ L R+KLI A LLGSDYT
Sbjct: 851 DGIVTDDSDIFLFGGTRIYKNMFNQAKFVECYLASDLEKEYSLDRKKLISFAHLLGSDYT 910
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ FP GL +FR+W
Sbjct: 911 EGIPGIGPVTALEILTEFP---GLEEFRDW 937
>gi|154280855|ref|XP_001541240.1| hypothetical protein HCAG_03337 [Ajellomyces capsulatus NAm1]
gi|150411419|gb|EDN06807.1| hypothetical protein HCAG_03337 [Ajellomyces capsulatus NAm1]
Length = 1111
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 108/150 (72%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK +R+A+ VS M +ECQELL++FGLPYI APMEAEAQCA + LV
Sbjct: 754 EQELKQLRSQQKKAQRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELLSLGLV 813
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DGVVTDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI+ A LLGSDYT
Sbjct: 814 DGVVTDDSDIFLFGGTRVYKNMFNQAKFVECYISNDLEKEYNLDRNKLIQFAHLLGSDYT 873
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI G+G V+A+E++ FP L FR+W
Sbjct: 874 EGIPGVGPVSALEILTEFP---TLEDFRDW 900
>gi|224006438|ref|XP_002292179.1| DNA repair enzyme [Thalassiosira pseudonana CCMP1335]
gi|220971821|gb|EED90154.1| DNA repair enzyme [Thalassiosira pseudonana CCMP1335]
Length = 307
Score = 181 bits (460), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/314 (35%), Positives = 178/314 (56%), Gaps = 49/314 (15%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
DE++ +ER+ +++ EM + ELL++ G+P++ +P EAEAQCA +E LVDGVVT+DS
Sbjct: 1 DEERNMERDISTITDEMKEDILELLELCGIPWVESPSEAEAQCAALEELGLVDGVVTEDS 60
Query: 935 DVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
D+F+FG R VYKN F++++YVE Y+ +D EK+L L + ++I +A+LLG DYT+G+ G+GI
Sbjct: 61 DIFVFGGRKVYKNFFNEQQYVEAYYAKDAEKELALGKHQMIALAMLLGGDYTDGVKGVGI 120
Query: 995 VNAIEVVNAFP-EED---GLSKFREWIES-PDP-----------TILGK----------- 1027
VN +E++ AFP ED L KFREW++ DP I K
Sbjct: 121 VNGMEILQAFPIGEDIHASLQKFREWLDGMGDPPSNADGTLSNEMIFHKKHKSARHRWVA 180
Query: 1028 ---FDVQTGASSRKRRSSD-GDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKK 1083
F + S+ ++ + D + ++AK ++ G+ F +D+++ S + K
Sbjct: 181 PSDFPSRAIISAYQKPTVDKSEARFSWAKPNMEGLRHFCSETLGWDQEETSRIVGPVL-K 239
Query: 1084 IFMDKHTQLRLEAFYTFNE---RFAKIRSKRIKKAVKGITGSQSLLLMDDAG-------- 1132
+ Q RLE+++ + +FA++RSKR+K + GI G +DDA
Sbjct: 240 VLESGSKQTRLESYFMKYDDGIKFAEVRSKRLKAVLDGIQG------VDDAAGEDQGPKR 293
Query: 1133 QEVSKSRKKRKNNG 1146
E SK KKRK G
Sbjct: 294 DEDSKQPKKRKRRG 307
>gi|302674926|ref|XP_003027147.1| hypothetical protein SCHCODRAFT_70854 [Schizophyllum commune H4-8]
gi|300100833|gb|EFI92244.1| hypothetical protein SCHCODRAFT_70854 [Schizophyllum commune H4-8]
Length = 1139
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 109/151 (72%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L ++ R AE V+ +M A+ +L++FG+PY+ APMEAEAQCA + NL
Sbjct: 737 IDDEITSLRQQRTAAMRAAEDVTQQMVAQIMIMLRLFGIPYMTAPMEAEAQCATLVSLNL 796
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDGV+TDDSDVFLFGA V+KN+F+ K VE + D++++LGL R LIR+A LLGSDY
Sbjct: 797 VDGVITDDSDVFLFGAARVFKNMFNQSKTVECFLAADLQRELGLDRGVLIRLAYLLGSDY 856
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
TEG+ G+G V A+E++ FP EDGL +FREW
Sbjct: 857 TEGLPGVGPVMAMELLREFPGEDGLERFREW 887
>gi|343424970|emb|CBQ68507.1| related to RAD2-structure-specific nuclease of the nucleotide
excision repairosome [Sporisorium reilianum SRZ2]
Length = 1495
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 106/135 (78%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
R+ E ++ +M E Q +L++FGLPYI APMEAEAQCA + LVDG++TDDSDVFLFG+
Sbjct: 998 RSEEDITKQMAQEIQMMLRLFGLPYITAPMEAEAQCAELVSRRLVDGIITDDSDVFLFGS 1057
Query: 942 RSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+YKN+F++ K VE + + D++++LGL REKL+R+A LGSDYT+G++G+G V A+E++
Sbjct: 1058 TRIYKNMFNNNKIVECFLLSDMQRELGLDREKLVRLAYYLGSDYTDGLAGVGPVVAMELL 1117
Query: 1002 NAFPEEDGLSKFREW 1016
FP EDGL KFREW
Sbjct: 1118 ALFPGEDGLLKFREW 1132
>gi|449543076|gb|EMD34053.1| hypothetical protein CERSUDRAFT_107818 [Ceriporiopsis subvermispora
B]
Length = 1202
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 112/153 (73%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L ++K R++E V+ +M ++ +L++FG+PYI APMEAEAQCA + L
Sbjct: 791 IDEEIRALNQQKKAAMRDSEDVTQQMVSQIMVMLRLFGIPYITAPMEAEAQCAELLTLGL 850
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG++TDDSDVFLFG + V KN+F+ K VE Y + D++++LGL R+KLIR+A LLGSDY
Sbjct: 851 VDGIITDDSDVFLFGGQRVLKNMFNQSKTVECYLLPDLDRELGLDRDKLIRLAYLLGSDY 910
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREWIE 1018
TEG+ G+G V A+E++ FP DGL KF++W +
Sbjct: 911 TEGLPGVGPVVAMELLTEFPGLDGLHKFKDWWQ 943
>gi|302415937|ref|XP_003005800.1| DNA-repair protein rad13 [Verticillium albo-atrum VaMs.102]
gi|261355216|gb|EEY17644.1| DNA-repair protein rad13 [Verticillium albo-atrum VaMs.102]
Length = 1209
Score = 181 bits (459), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 123/325 (37%), Positives = 173/325 (53%), Gaps = 32/325 (9%)
Query: 724 CEDSGTTMELTEVQLVKGRCLSASAKGDEH----LTHEDKKNNCEAETSVLPGDKKNEIE 779
++S E+TE Q V G S + DE T +++SV P + +IE
Sbjct: 675 AQESSEKAEVTETQTVPGGNSSGAPSADEANEPVPTITLGGVAISSKSSVSPEPEFEDIE 734
Query: 780 V---EMKHDFTAEPSCRT----VGTSDTSIPLVKTSGNASIYDTDIEQKSAEERTP---- 828
+ E +HD T T V +D S + + D E+ A+ P
Sbjct: 735 IPEQEDEHDVTVRELSNTPESVVPVADISTADKEPDTTGVAHQADFEEALAQTAQPADEN 794
Query: 829 --DTY--LKDS-------KQNTGIFATKAIE-NVHA----EATEKILEEEMQILDHEYMY 872
D Y DS ++ +FA+ A E + HA E K +E + + E
Sbjct: 795 AEDNYNPFGDSDVDEYSDPEDEELFASLAQEADEHARFASELNHKSEQENREAYERELKA 854
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L +QKK R+A+ V+ M ECQ LL++FG+PYI APMEAEAQCA + LVDG+VTD
Sbjct: 855 LRTQQKKDRRDADEVTQVMVGECQALLRLFGIPYITAPMEAEAQCAELVRLGLVDGIVTD 914
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD FLFG VYKN+F+ K VE Y D++K+L L+RE+L+ +ALLLGSDYT+G+ G+
Sbjct: 915 DSDTFLFGGTRVYKNMFNSNKLVECYLSSDLDKELSLSREQLVSIALLLGSDYTDGLPGV 974
Query: 993 GIVNAIEVVNAFPE-EDGLSKFREW 1016
G V A+E+++ FPE E GL+ F W
Sbjct: 975 GPVTAVEILSEFPESEGGLAAFCHW 999
>gi|348516587|ref|XP_003445820.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Oreochromis niloticus]
Length = 1119
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 164/283 (57%), Gaps = 30/283 (10%)
Query: 859 LEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
LE +Q+ E L +++++ ER A +V+ +M+ E QELL++FG+PY++APMEAEAQCA
Sbjct: 698 LESSLQV---EQSNLREQKQQQERMANTVTGQMYLESQELLRLFGVPYLVAPMEAEAQCA 754
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMA 978
++ A+ G +TDDSDV+LFG R VYKN F KYVE Y D++ LGL R K+I +A
Sbjct: 755 ALDWADHTHGTITDDSDVWLFGGRHVYKNFFSQDKYVEHYQYSDLQSQLGLDRTKMINLA 814
Query: 979 LLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREW----------IESPDPTILG 1026
LLGSDYTEG+ G+G V +E++N FP + L +F W + P T +
Sbjct: 815 YLLGSDYTEGVPGVGYVTGMEILNEFPGPGLEPLIQFSNWWSEAQEKKRLVSDPRDTKVK 874
Query: 1027 K----FDVQTG------ASSRKRRSSDGDKD-VNYAKNSVGGVSEFDESISQFD-EDKQS 1074
K +Q G A + + D + ++ + + + EF +S+F +++
Sbjct: 875 KKLRDVKLQPGFPNPVVAQAYLHPTVDQSESFFSWGRPQLDMIKEF--CLSRFGWSSRKT 932
Query: 1075 AEYSQNMKKIFMDKHTQLRLEAFYTFNERFAK-IRSKRIKKAV 1116
E Q + K + TQLR+++F+ +R + IRS+R+++AV
Sbjct: 933 EETLQPVIKQLNTQQTQLRIDSFFRMEQREKQAIRSQRLRRAV 975
>gi|393242077|gb|EJD49596.1| hypothetical protein AURDEDRAFT_182745 [Auricularia delicata
TFB-10046 SS5]
Length = 1291
Score = 181 bits (458), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 112/158 (70%)
Query: 859 LEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
L+ Q +D E L +K +R++E ++ +M ++ LL++FG+PYI APMEAEAQCA
Sbjct: 852 LDAVRQEIDQELFALNQARKAAQRDSEDITQQMISQIMVLLRLFGIPYITAPMEAEAQCA 911
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMA 978
+ LV+GV+TDDSDVFLFG+ V+KN+F+ K VE + D+ ++LGL R+KLIR+A
Sbjct: 912 TLVALGLVEGVITDDSDVFLFGSARVFKNMFNQSKTVECFIAGDLTRELGLDRDKLIRLA 971
Query: 979 LLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
LLGSDY +G+ G+G V A+E++ FP DGL KFREW
Sbjct: 972 YLLGSDYVDGLPGVGPVVAMEILEEFPGADGLHKFREW 1009
>gi|225558184|gb|EEH06469.1| DNA excision repair protein Rad2 [Ajellomyces capsulatus G186AR]
Length = 1159
Score = 181 bits (458), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 107/150 (71%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M +ECQELL++FGLPYI APMEAEAQCA + LV
Sbjct: 803 EQELKQLRSQQKKARRDADEVSHIMISECQELLRLFGLPYITAPMEAEAQCAELLSLGLV 862
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DGVVTDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI+ A LLGSDYT
Sbjct: 863 DGVVTDDSDIFLFGGTRVYKNMFNQAKFVECYISNDLEKEYNLDRNKLIQFAHLLGSDYT 922
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI G+G V+A+E++ FP L FR+W
Sbjct: 923 EGIPGVGPVSALEILTEFPT---LEDFRDW 949
>gi|393220967|gb|EJD06452.1| PIN domain-like protein, partial [Fomitiporia mediterranea MF3/22]
Length = 1250
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 110/151 (72%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L +++K R+AE V+ M A+ +L++FG+PYI APMEAEAQCA + L
Sbjct: 794 IDDEIRQLREQRKAAMRDAEDVNQAMIAQIMTMLRLFGIPYITAPMEAEAQCAALVDLGL 853
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDGV+TDDSDVFLFGA+ VYKN+F+ K VE + + D+ ++LGL R LIR+A LLGSDY
Sbjct: 854 VDGVITDDSDVFLFGAKRVYKNMFNQSKTVECFLLTDLARELGLDRGTLIRLAYLLGSDY 913
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
T G+ G+G V A+E++ FP +DGL KF++W
Sbjct: 914 TLGLPGVGPVVAMELLQEFPGDDGLHKFKDW 944
>gi|346973852|gb|EGY17304.1| DNA-repair protein rad13 [Verticillium dahliae VdLs.17]
Length = 1187
Score = 180 bits (457), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 124/182 (68%), Gaps = 6/182 (3%)
Query: 841 IFATKAIE-NVHA----EATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAEC 895
+FA+ A E + HA E K +E + + E L +QKK R+A+ V+ M EC
Sbjct: 832 LFASLAQEADEHARFASELNHKSEQENREAYERELKALRTQQKKDRRDADEVTQVMVGEC 891
Query: 896 QELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYV 955
Q LL++FG+PYI APMEAEAQCA + LVDG+VTDDSD FLFG VYKN+F+ K V
Sbjct: 892 QALLRLFGIPYITAPMEAEAQCAELVRLGLVDGIVTDDSDTFLFGGTRVYKNMFNSNKLV 951
Query: 956 ETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPE-EDGLSKFR 1014
E Y D++K+L L+RE+L+ +ALLLGSDYT+G+ G+G V A+E+++ FPE E GL+ F
Sbjct: 952 ECYLSSDLDKELSLSREQLVSIALLLGSDYTDGLPGVGPVTAVEILSEFPESEGGLAAFC 1011
Query: 1015 EW 1016
+W
Sbjct: 1012 DW 1013
>gi|388858154|emb|CCF48222.1| related to RAD2-structure-specific nuclease of the nucleotide
excision repairosome [Ustilago hordei]
Length = 1592
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 76/135 (56%), Positives = 104/135 (77%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
R+ E ++ +M E Q +L++FGLPYI APMEAEAQCA + LVDG++TDDSDVFLFG
Sbjct: 1029 RSEEDITKQMAQEIQMMLRLFGLPYITAPMEAEAQCAELVSRRLVDGIITDDSDVFLFGG 1088
Query: 942 RSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+YKN+F++ K VE + + D++++LGL REKL+R+A LGSDYTEG+ G+G V A+E++
Sbjct: 1089 TRIYKNMFNNNKIVECFLLSDMQRELGLDREKLVRLAYYLGSDYTEGLVGVGPVVAMELL 1148
Query: 1002 NAFPEEDGLSKFREW 1016
FP EDGL KFR+W
Sbjct: 1149 ALFPGEDGLLKFRDW 1163
>gi|240273423|gb|EER36944.1| DNA excision repair protein Rad2 [Ajellomyces capsulatus H143]
Length = 1159
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 107/150 (71%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M +ECQELL++FGLPYI APMEAEAQCA + LV
Sbjct: 803 EQELKQLRSQQKKARRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELLSLGLV 862
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DGVVTDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI+ A LLGSDYT
Sbjct: 863 DGVVTDDSDIFLFGGTRVYKNMFNQAKFVECYISNDLEKEYNLDRNKLIQFAHLLGSDYT 922
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI G+G V+A+E++ FP L FR+W
Sbjct: 923 EGIPGVGPVSALEILTEFP---TLEDFRDW 949
>gi|432119340|gb|ELK38422.1| DNA repair protein complementing XP-G cells [Myotis davidii]
Length = 1164
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 156/274 (56%), Gaps = 29/274 (10%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 742 EELETLESNLLTEQNSLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQ 801
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 802 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 861
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPTILG 1026
+A LLGSDYTEGI+ +G V A+E++N FP + L KF EW P+P
Sbjct: 862 LAYLLGSDYTEGIATVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNKKIRPNP---- 917
Query: 1027 KFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFM 1086
+D + RK + + G + A + V F + ++ DE + K
Sbjct: 918 -YDTKVKKKLRKLQLTPGFPNPAVADAYLKPVRYFGWNRTKTDESLFP------VLKQLS 970
Query: 1087 DKHTQLRLEAFYTFNERFAK----IRSKRIKKAV 1116
+ TQLR+++F+ ++ + I+S+R+ +AV
Sbjct: 971 AQQTQLRIDSFFRVAQQEKQDAKAIKSQRLNRAV 1004
>gi|325095909|gb|EGC49219.1| DNA excision repair protein Rad2 [Ajellomyces capsulatus H88]
Length = 1159
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 107/150 (71%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M +ECQELL++FGLPYI APMEAEAQCA + LV
Sbjct: 803 EQELKQLRSQQKKARRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELLSLGLV 862
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DGVVTDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI+ A LLGSDYT
Sbjct: 863 DGVVTDDSDIFLFGGTRVYKNMFNQAKFVECYISNDLEKEYNLDRNKLIQFAHLLGSDYT 922
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI G+G V+A+E++ FP L FR+W
Sbjct: 923 EGIPGVGPVSALEILTEFP---TLEDFRDW 949
>gi|359322522|ref|XP_003639860.1| PREDICTED: DNA repair protein complementing XP-G cells-like [Canis
lupus familiaris]
Length = 1185
Score = 180 bits (457), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 160/292 (54%), Gaps = 42/292 (14%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+++ + L +Q++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 735 EELETLENDLLAQQHSLKAQQQQQERTAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQ 794
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 795 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 854
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPTILG 1026
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 855 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNKKIRPNP---- 910
Query: 1027 KFDVQTGASSRKRRSSDGDKD------------------VNYAKNSVGGVSEFDESISQF 1068
+D + RK + + G + + K + + EF + +
Sbjct: 911 -YDTKVKKKLRKLQLTPGFPNPAVADAYLKPVVDDSRGSFLWGKPDLDKIREFCQRYFGW 969
Query: 1069 DEDKQSAEYSQNMKKIFMDKHTQLRLEAFYTFNERFAK----IRSKRIKKAV 1116
+ K +K++ + TQLR+++F+ ++ + IRS+R+ +AV
Sbjct: 970 NRTKTDESLFPVLKQLNA-QQTQLRIDSFFRLAQQERQDAKGIRSQRLNRAV 1020
>gi|403413406|emb|CCM00106.1| predicted protein [Fibroporia radiculosa]
Length = 2893
Score = 180 bits (456), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 123/185 (66%), Gaps = 5/185 (2%)
Query: 834 DSKQNTGIFATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFA 893
D + G FA + I +V E + E +D E L ++K R++E ++ +M +
Sbjct: 2446 DPQAEEGEFA-RFISHVKGRDLEAVRRE----IDEEIRDLHQQKKIAMRDSEDITQQMIS 2500
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 953
+ +L++FG+PYI APMEAEAQCA + LVDG++TDDSDVFLFG V KN+F+ K
Sbjct: 2501 QIMIMLRLFGIPYITAPMEAEAQCAELLSLGLVDGIITDDSDVFLFGGMRVLKNMFNQSK 2560
Query: 954 YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKF 1013
VE + + D+E++LGL R+KLIR+A LLGSDYT+G+ G+G V A+E++ FP +DGL KF
Sbjct: 2561 TVECFLLSDLERELGLERDKLIRLAYLLGSDYTDGLPGVGPVVAMELLKEFPGQDGLHKF 2620
Query: 1014 REWIE 1018
+ W +
Sbjct: 2621 KYWWQ 2625
>gi|328791064|ref|XP_393585.4| PREDICTED: DNA repair protein complementing XP-G cells homolog [Apis
mellifera]
Length = 1094
Score = 180 bits (456), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 117/316 (37%), Positives = 172/316 (54%), Gaps = 55/316 (17%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
KLER +S ++ E QELLQ+FG+PY++APMEAEAQCAY+E +L DG +TDDSD++L
Sbjct: 719 KLERQGIDISDQIRIEAQELLQLFGIPYLVAPMEAEAQCAYLEQIHLTDGTITDDSDIWL 778
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
FG + VYKN FD+ K V + DI+ LTR ++IR+ALL+GSDYT G++GIG V A+
Sbjct: 779 FGGQCVYKNFFDNNKKVLEFRACDIQHYFKLTRNEMIRLALLVGSDYTTGLTGIGPVTAL 838
Query: 999 EVVNAFPEE-----DGLSKFREWIESPDPTILGK---------FDVQTGASSR------- 1037
E++ AFP E GL F WIE+ T GK ++Q G S+
Sbjct: 839 EILAAFPSEGDDLLQGLVNFCSWIENGKATGPGKTSLRTKLQNLEIQKGFPSQAVVQAYL 898
Query: 1038 -------KRRSSDGDKDV----NYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFM 1086
K S G + NY K G +D+DK + MKK+
Sbjct: 899 SPMVDESKETFSWGKPNFILLGNYVKLKFG-----------WDKDKYNKIIVPVMKKL-T 946
Query: 1087 DKHTQLRLEAFYTFNERFAKIR---SKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRK 1143
+K Q +++A++ + I S+R++KAVK + + L+ ++ +S KK+K
Sbjct: 947 EKEIQNKIDAYFKLHTIPKPIEINLSQRVQKAVKKLNTDNTKLIENEV-----QSLKKQK 1001
Query: 1144 NNGLENGNNRSQKAPK 1159
++ NGN + +K K
Sbjct: 1002 SS---NGNQKKRKELK 1014
>gi|267421|sp|P14629.1|ERCC5_XENLA RecName: Full=DNA repair protein complementing XP-G cells homolog;
AltName: Full=Xeroderma pigmentosum group G-complementing
protein homolog
gi|312433|emb|CAA49597.1| XP-G related factor [Xenopus laevis]
Length = 1196
Score = 180 bits (456), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 150/259 (57%), Gaps = 23/259 (8%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
ER A +V+ +M E QELLQ+FG+PYI+APMEAEAQCA ++L + G +TDDSD++LFG
Sbjct: 791 ERIAATVTGQMCLESQELLQLFGIPYIVAPMEAEAQCAILDLTDQTSGTITDDSDIWLFG 850
Query: 941 ARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEV 1000
AR VYKN F K+VE Y DI LGL R KLI +A LLGSDYTEGI +G V+A+E+
Sbjct: 851 ARHVYKNFFSQNKHVEYYQYADIHNQLGLDRSKLINLAYLLGSDYTEGIPTVGYVSAMEI 910
Query: 1001 VNAFPEE--DGLSKFREWIES--------PDPT------ILGKFDVQTGASSRKRRSSDG 1044
+N FP + + L KF+EW P+P L D+Q + S+
Sbjct: 911 LNEFPGQGLEPLVKFKEWWSEAQKDKKMRPNPNDTKVKKKLRLLDLQQSFPNPAVASAYL 970
Query: 1045 DKDVNYAKNSVGGVSEFDESISQFDEDK------QSAEYSQNMKKIFMDKHTQLRLEAFY 1098
V+ +K++ E I +F E + ++ E + K + TQLR+++F+
Sbjct: 971 KPVVDESKSAFSWGRPDLEQIREFCESRFGWYRLKTDEVLLPVLKQLNAQQTQLRIDSFF 1030
Query: 1099 TFNER-FAKIRSKRIKKAV 1116
+ A ++S+R+++AV
Sbjct: 1031 RLEQHEAAGLKSQRLRRAV 1049
>gi|302845188|ref|XP_002954133.1| hypothetical protein VOLCADRAFT_82613 [Volvox carteri f. nagariensis]
gi|300260632|gb|EFJ44850.1| hypothetical protein VOLCADRAFT_82613 [Volvox carteri f. nagariensis]
Length = 254
Score = 179 bits (455), Expect = 9e-42, Method: Composition-based stats.
Identities = 81/124 (65%), Positives = 102/124 (82%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQD 962
G+P + P AEAQCA++E++ LVDGVVTDD+DVFLFGAR VY++IF+++KYVE Y M D
Sbjct: 99 GVPTVSEPAAAEAQCAFLEVSGLVDGVVTDDNDVFLFGARHVYRHIFENKKYVEEYQMSD 158
Query: 963 IEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDP 1022
+E++LGLTRE+L MALLLGSDYTEG GIGIVNA+EVV AFP +GL +FR W+ESPD
Sbjct: 159 VERELGLTRERLAEMALLLGSDYTEGCGGIGIVNAVEVVQAFPGLEGLQRFRSWVESPDV 218
Query: 1023 TILG 1026
I+
Sbjct: 219 GIVA 222
>gi|239609845|gb|EEQ86832.1| DNA excision repair protein Rad2 [Ajellomyces dermatitidis ER-3]
Length = 1166
Score = 179 bits (455), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 106/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M +ECQELL++FGLPYI APMEAEAQCA + LV
Sbjct: 814 EQELRQLRSQQKKDRRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELLSLGLV 873
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DGVVTDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI+ A LLGSDYT
Sbjct: 874 DGVVTDDSDIFLFGGTRVYKNMFNTVKFVECYLSNDLEKEYNLDRSKLIQFAHLLGSDYT 933
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI G+G V A+E++ FP L FR+W
Sbjct: 934 EGIPGVGPVTALEILTEFPT---LEDFRDW 960
>gi|261198979|ref|XP_002625891.1| DNA excision repair protein Rad2 [Ajellomyces dermatitidis SLH14081]
gi|239595043|gb|EEQ77624.1| DNA excision repair protein Rad2 [Ajellomyces dermatitidis SLH14081]
Length = 1128
Score = 179 bits (455), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 106/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M +ECQELL++FGLPYI APMEAEAQCA + LV
Sbjct: 776 EQELRQLRSQQKKDRRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELLSLGLV 835
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DGVVTDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI+ A LLGSDYT
Sbjct: 836 DGVVTDDSDIFLFGGTRVYKNMFNTVKFVECYLSNDLEKEYNLDRSKLIQFAHLLGSDYT 895
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI G+G V A+E++ FP L FR+W
Sbjct: 896 EGIPGVGPVTALEILTEFPT---LEDFRDW 922
>gi|148226745|ref|NP_001081629.1| DNA repair protein complementing XP-G cells homolog [Xenopus laevis]
gi|50416246|gb|AAH77363.1| XPGC protein [Xenopus laevis]
Length = 1197
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 154/268 (57%), Gaps = 25/268 (9%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ ER A +V+ +M E QELLQ+FG+PYI+APMEAEAQCA ++L + G +TD
Sbjct: 784 LQAQRQQQERIAATVTGQMCLESQELLQLFGIPYIVAPMEAEAQCAILDLTDQTSGTITD 843
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F K+VE Y DI LGL R KLI +A LLGSDYTEGI +
Sbjct: 844 DSDIWLFGARHVYKNFFSQNKHVEYYQYADIHNQLGLDRSKLINLAYLLGSDYTEGIPTV 903
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPT------------ILGKFDV 1030
G V+A+E++N FP + + L KF+EW P+P + F
Sbjct: 904 GYVSAMEILNEFPGQGLEPLVKFKEWWSEAQKDKKMRPNPNDTKVKKKLRLLELQQSFPN 963
Query: 1031 QTGASSRKRRSSDGDKD-VNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
AS+ + D K ++ + + + EF ES + K + E + K +
Sbjct: 964 PAVASAYLKPVVDESKSAFSWGRPDLEQIREFCESRFGWYRLK-TDEVLLPVLKQLNAQQ 1022
Query: 1090 TQLRLEAFYTFNERFAK-IRSKRIKKAV 1116
TQLR+++F+ + A ++S+R+++AV
Sbjct: 1023 TQLRIDSFFRLEQHEAACLKSQRLRRAV 1050
>gi|327350765|gb|EGE79622.1| DNA excision repair protein Rad2 [Ajellomyces dermatitidis ATCC
18188]
Length = 1166
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/150 (57%), Positives = 106/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M +ECQELL++FGLPYI APMEAEAQCA + LV
Sbjct: 814 EQELRQLRSQQKKDRRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELLSLGLV 873
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DGVVTDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI+ A LLGSDYT
Sbjct: 874 DGVVTDDSDIFLFGGTRVYKNMFNTVKFVECYLSNDLEKEYNLDRSKLIQFAHLLGSDYT 933
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI G+G V A+E++ FP L FR+W
Sbjct: 934 EGIPGVGPVTALEILTEFPT---LEDFRDW 960
>gi|452824082|gb|EME31087.1| DNA excision repair protein ERCC-5 [Galdieria sulphuraria]
Length = 928
Score = 179 bits (454), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 166/293 (56%), Gaps = 32/293 (10%)
Query: 859 LEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
LE Q + E L E L+ ++ ++ EM E +ELL+M G+PYI APMEAEAQCA
Sbjct: 582 LENLFQEFEKERRELRQEFTHLKSGSDIITDEMCEEIRELLRMLGIPYIQAPMEAEAQCA 641
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMA 978
Y LV+GVVT+DSD FLFGA++V++NIF+D+KYVE Y M+DIE+ LGL REKLI ++
Sbjct: 642 YFSQVGLVEGVVTEDSDAFLFGAKTVFRNIFEDKKYVEQYEMEDIERYLGLNREKLILLS 701
Query: 979 LLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW------------IESPDPTIL- 1025
LLLGSDYT+GI G+G+VNA E++ AFP + L +F W ++S DP +
Sbjct: 702 LLLGSDYTQGIHGVGVVNATEIMRAFPSFEELIEFAHWANQLSLKEERISLDSEDPNFVK 761
Query: 1026 GKFDVQTGASSRKRRSSDG--DKDV----------------NYAKNSVGGVSEFDESISQ 1067
+F ++ R D +K V + + ++ + EF +
Sbjct: 762 NEFFLKHRKMKRNWVIHDSFPNKHVVDAYRYPMVDTSSIEFHCQRPNIAQLVEFCRAKFG 821
Query: 1068 FDEDKQSAEYSQNMKKIFMDKHTQLRLEAFYTFNERFAKIRSKRIKKAVKGIT 1120
++ DK +K Q +E ++ RFAKI+SKR++ AV+GIT
Sbjct: 822 WNSDKVKKLVIPVLKAYDARNQRQTCIEQYF-HPMRFAKIKSKRLENAVRGIT 873
Score = 42.4 bits (98), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 26/191 (13%)
Query: 114 LVRNNDAKGKNV-------LSDDLGQADTVGISPESHDVVSKSRDHKKLDEMLAASIAAE 166
L RNN KN L D+L Q D++ PE + A S E
Sbjct: 156 LERNNAETEKNTEQLDSEALDDNLEQRDSITEEPE----------------IEAHSNETE 199
Query: 167 EDGSLSNNASASAASLPLEEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMRE 226
ED +N + S E E EE +P + LA LPP M ++ ++R
Sbjct: 200 EDKDKEDNLTNVEVSNLSENTVSFEKEEYEVPNFC-EMSSDSLALLPPEMFETVVSEIRS 258
Query: 227 QLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIAS 286
+ +R+++ KV+ P FS+ Q++ +L+ +RE+ ++ A G RIAS
Sbjct: 259 RERNLHREEFIKVENNPADFSQKQLEGFLRLSLTKREV--MKARATAYSHLGHGRRRIAS 316
Query: 287 EANREFIFSSS 297
+ + + + +
Sbjct: 317 DPGKNYTLTKT 327
>gi|390457518|ref|XP_002742570.2| PREDICTED: DNA repair protein complementing XP-G cells [Callithrix
jacchus]
Length = 1638
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/271 (37%), Positives = 147/271 (54%), Gaps = 28/271 (10%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 1204 LKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITD 1263
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 1264 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTV 1323
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP-------------TILGKFD 1029
G V A+E++N FP + L KF EW P+P G +
Sbjct: 1324 GCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTKVKKKLRTLQLTAGFPN 1383
Query: 1030 VQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
+ K D + K + + EF + ++ K +K++ +
Sbjct: 1384 PAVAEAYLKPVVDDSQASYLWGKPDLDKIREFCQRYFGWNRTKTDESLFPVLKQL-NAQQ 1442
Query: 1090 TQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
TQLR+++F+ E +IRS+R+K+AV
Sbjct: 1443 TQLRIDSFFRLAQQEKEDAKRIRSQRLKRAV 1473
>gi|449272261|gb|EMC82261.1| DNA repair protein complementing XP-G cell [Columba livia]
Length = 1133
Score = 179 bits (453), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 154/289 (53%), Gaps = 46/289 (15%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
L E L ++++ ER A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L +
Sbjct: 697 LSAEQNMLHAQKQQQERVAASVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAVLDLTDQ 756
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
G +TDDSDV+LFGAR VYKN F KYVE Y D + LGL R KLI +A LLGSDY
Sbjct: 757 TSGTITDDSDVWLFGARHVYKNFFSQNKYVEYYQYVDFQNQLGLDRSKLINLAYLLGSDY 816
Query: 986 TEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPTILGKFDVQTGAS 1035
TEGI +G V A+E++N FP + L KF EW P+P D +
Sbjct: 817 TEGIPNVGFVTAMEILNEFPGRGLEPLLKFAEWWNEAQKNKKLRPNP-----HDTKVKKK 871
Query: 1036 SRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDK----QSAEYSQNMKKIFMD---- 1087
R+ + + G + A+ + V DES F K Q EYS D
Sbjct: 872 LRELQLASGFPNPAVAEAYLKPV--VDESRGSFTWGKPDVEQIREYSLTFCTFCQDHFGW 929
Query: 1088 ------------------KHTQLRLEAFYTF--NERFAKIRSKRIKKAV 1116
+ TQLR+++F+ +ER A I+S+R+++AV
Sbjct: 930 TRTKVDEILSPVIKQLNLQQTQLRIDSFFRLEQHERQA-IKSQRLRRAV 977
>gi|392564416|gb|EIW57594.1| PIN domain-like protein [Trametes versicolor FP-101664 SS1]
Length = 1244
Score = 179 bits (453), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 123/185 (66%), Gaps = 5/185 (2%)
Query: 834 DSKQNTGIFATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFA 893
D G FA + I V + E + E +D E L ++K R++E ++ +M +
Sbjct: 786 DPHAEEGEFA-RFISQVKGKDIESVRRE----IDDEIRDLNRQKKTAMRDSEDITQQMIS 840
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 953
+ +L++FG+PYI APMEAEAQCA + LVDG++TDDSDVFLFG V KN+F+ K
Sbjct: 841 QIMIMLRLFGIPYITAPMEAEAQCAALLSFGLVDGIITDDSDVFLFGGGRVLKNMFNQSK 900
Query: 954 YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKF 1013
VE + + D+E++LGL R+KL+R+A LLGSDYT+G+ G+G V A+E+++ FP +DGL KF
Sbjct: 901 TVECFLLSDLERELGLDRDKLVRLAYLLGSDYTDGLPGVGPVVAMELLSEFPGQDGLHKF 960
Query: 1014 REWIE 1018
R W +
Sbjct: 961 RAWWQ 965
>gi|134057863|emb|CAK38230.1| unnamed protein product [Aspergillus niger]
Length = 916
Score = 179 bits (453), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M ECQ+LL++FGLPYI APMEAEAQCA + LV
Sbjct: 561 EQELRQLRSQQKKDRRDADEVSQVMITECQQLLRLFGLPYITAPMEAEAQCAELVSLGLV 620
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSDVFLFG VYKN+F+ K+VE Y D+EK+ L R KLIR+A LLGSDYT
Sbjct: 621 DGIITDDSDVFLFGGTRVYKNMFNQSKFVECYLTTDLEKEYSLFRTKLIRLAHLLGSDYT 680
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F L FR+W
Sbjct: 681 EGIPGIGPVTALEILTEF---GTLEDFRDW 707
>gi|410947676|ref|XP_003980569.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein complementing XP-G
cells [Felis catus]
Length = 1128
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/276 (38%), Positives = 152/276 (55%), Gaps = 38/276 (13%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 694 LKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQTSGTITD 753
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 754 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTV 813
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWIE--------SPDPTILGKFDVQTGASSRKRRSS 1042
G V A+E++N FP + L KF EW PDP +D + RK + +
Sbjct: 814 GCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKSKKIRPDP-----YDTKVXKKLRKLQLT 868
Query: 1043 DGDKD------------------VNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKI 1084
G + + K + + EF + ++ K +K++
Sbjct: 869 PGFPNPAVADAYLKPVVDDSRGSFLWGKPDLDKIREFCQRYFGWNRTKTDESLFPVLKQL 928
Query: 1085 FMDKHTQLRLEAFYTFNE---RFAK-IRSKRIKKAV 1116
+ TQLR+++F+ + R AK IRS+R+ +AV
Sbjct: 929 -NAQQTQLRIDSFFRLAQQERRDAKGIRSQRLNRAV 963
>gi|70991587|ref|XP_750642.1| DNA excision repair protein Rad2 [Aspergillus fumigatus Af293]
gi|66848275|gb|EAL88604.1| DNA excision repair protein Rad2 [Aspergillus fumigatus Af293]
Length = 1130
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 106/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ V+ M ECQ+LL +FGLPYIIAPMEAEAQCA + LV
Sbjct: 775 EQELRQLRSQQKKDRRDADEVTQVMITECQQLLSLFGLPYIIAPMEAEAQCAELVSLGLV 834
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI +A LLGSDYT
Sbjct: 835 DGIITDDSDIFLFGGTRVYKNMFNQGKFVECYLTSDMEKEYALHRRKLISLAHLLGSDYT 894
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGISGIG V A+E++ F L +FR+W
Sbjct: 895 EGISGIGPVTALEILTEF---SSLEEFRDW 921
>gi|344284659|ref|XP_003414082.1| PREDICTED: DNA repair protein complementing XP-G cells-like
[Loxodonta africana]
Length = 1636
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/287 (36%), Positives = 158/287 (55%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYM----YLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 1187 EELETLESSLLEQQNSLKAQKQQQERAAATVTGQMFLESQELLRLFGVPYIEAPMEAEAQ 1246
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 1247 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 1306
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 1307 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQDNKKIRPNPYDTK 1366
Query: 1023 --TILGKFDVQTGA-------SSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
L K + G + K D + K +G + EF + ++ K
Sbjct: 1367 VKKKLRKLQLMPGFPNPAVAEAYLKPVVDDSRGSFLWGKPDLGKIREFCQRYFGWNRTKT 1426
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTFNERFAK----IRSKRIKKAV 1116
+K++ + + TQLR+++F+ ++ + I+S+R+ +AV
Sbjct: 1427 DESLFPVLKQLNV-QQTQLRIDSFFRLAQQEKQDAKGIKSQRLSRAV 1472
>gi|451852103|gb|EMD65398.1| hypothetical protein COCSADRAFT_114116, partial [Cochliobolus sativus
ND90Pr]
Length = 1213
Score = 178 bits (452), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 135/224 (60%), Gaps = 11/224 (4%)
Query: 796 GTSDTSIPLVKTSGNASIYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKAIE-NVHAEA 854
G D + P+V SG + D I AE D Y ++ +FA+ A E HA
Sbjct: 849 GPEDLTKPIVPYSG---VADDSIPMDIAEGNDSDQY--SDPEDEELFASLAKEAEEHARF 903
Query: 855 TEKILEEEMQILDH--EYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPME 912
+++ +D E L +QKK R+A+ V+ M +ECQ+LL +FGLPYI APME
Sbjct: 904 AQELSNNTAARVDFDEELKQLRAQQKKDRRDADEVTQTMISECQQLLALFGLPYITAPME 963
Query: 913 AEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTRE 972
AEAQCA + LVDG+VTDDSD FLFG VYKN+F+ K+VE Y D+ + LTR+
Sbjct: 964 AEAQCAELVNLGLVDGIVTDDSDTFLFGGTRVYKNMFNAAKFVECYLSSDLTSEFSLTRQ 1023
Query: 973 KLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
KLI +A LLGSDYTEGI GIG V A+E+++ F + L+ FR+W
Sbjct: 1024 KLIDIAQLLGSDYTEGIPGIGPVTALEILSEFQD---LTAFRKW 1064
>gi|344244135|gb|EGW00239.1| DNA repair protein complementing XP-G cells-like [Cricetulus griseus]
Length = 1028
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 150/271 (55%), Gaps = 28/271 (10%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ ER A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 597 LEAQKQQQERIAASVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITD 656
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 657 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTV 716
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWI---ESPDPTILGKFDVQTGASSRKRRSSDGDKD 1047
G V A+E++N FP D L KF EW ++ D + RK + + G +
Sbjct: 717 GCVTAMEILNEFPGRGLDPLLKFSEWWHEAQTSKKVAANPHDTKVKKKLRKLQLTPGFPN 776
Query: 1048 ------------------VNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
+ K V + EF + +++ K +K++ + +
Sbjct: 777 PAVADAYLRPVVDDSRGSFLWGKPDVDKIREFCQRYFGWNKTKTDESLFPVLKQLNV-QQ 835
Query: 1090 TQLRLEAFYTFNER----FAKIRSKRIKKAV 1116
TQLR+++F+ ++ I+S+R+ +AV
Sbjct: 836 TQLRIDSFFKLAQQEKQDAKHIKSQRLNRAV 866
>gi|345571348|gb|EGX54162.1| hypothetical protein AOL_s00004g195 [Arthrobotrys oligospora ATCC
24927]
Length = 1248
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L D+QKK R+A+ V+ M ECQ+LLQMFG+PYI APMEAEAQCA + LV
Sbjct: 846 ERELRTLRDQQKKDRRDADEVTKIMITECQQLLQMFGIPYITAPMEAEAQCAELVNLGLV 905
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD+FLFG VYKN+F+ KYVE Y D+E + L R+K+IR+A LLGSDYT
Sbjct: 906 DGIVTDDSDIFLFGGTRVYKNMFNQAKYVECYLASDLENEYSLDRKKMIRLAHLLGSDYT 965
Query: 987 EGISGIGIVNAIEVVNAF-PEEDGLSKFREW 1016
EG+ G+G V A+EV+ F +D L F+ W
Sbjct: 966 EGLVGVGPVTALEVLANFGGGDDALHDFKAW 996
>gi|336265442|ref|XP_003347492.1| Rad2 protein [Sordaria macrospora k-hell]
gi|380087974|emb|CCC05192.1| putative Rad2 protein [Sordaria macrospora k-hell]
Length = 1279
Score = 178 bits (451), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 120/184 (65%), Gaps = 12/184 (6%)
Query: 854 ATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEA 913
A+ K L+E + E L +Q+K R+A+ V+ M ECQ LL+ FG+PYI APMEA
Sbjct: 851 ASSKSLQENQAAYEAELKALRSQQRKDRRDADEVTQIMITECQALLRFFGIPYITAPMEA 910
Query: 914 EAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREK 973
EAQCA + LVDG+VTDDSD FLFG VYKN+F+ K+VE Y + DIEK+L L RE+
Sbjct: 911 EAQCAELVRLGLVDGIVTDDSDTFLFGGTRVYKNMFNGNKFVECYLLNDIEKELSLGREQ 970
Query: 974 LIRMALLLGSDYTEGISGIGIVNAIEVVNAFPE--EDG----LSKFREWIES------PD 1021
LI +A LLGSDYTEG+ G+G V A+E+++ FP E G L F++W + PD
Sbjct: 971 LIALAQLLGSDYTEGLPGVGPVTAVEILSEFPPSSESGPMSSLKDFKQWWTTLQSTPHPD 1030
Query: 1022 PTIL 1025
++L
Sbjct: 1031 ASLL 1034
>gi|317028500|ref|XP_001390185.2| single-stranded DNA endonuclease [Aspergillus niger CBS 513.88]
Length = 1100
Score = 178 bits (451), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M ECQ+LL++FGLPYI APMEAEAQCA + LV
Sbjct: 745 EQELRQLRSQQKKDRRDADEVSQVMITECQQLLRLFGLPYITAPMEAEAQCAELVSLGLV 804
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSDVFLFG VYKN+F+ K+VE Y D+EK+ L R KLIR+A LLGSDYT
Sbjct: 805 DGIITDDSDVFLFGGTRVYKNMFNQSKFVECYLTTDLEKEYSLFRTKLIRLAHLLGSDYT 864
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F L FR+W
Sbjct: 865 EGIPGIGPVTALEILTEF---GTLEDFRDW 891
>gi|350632743|gb|EHA21110.1| hypothetical protein ASPNIDRAFT_45646 [Aspergillus niger ATCC 1015]
Length = 1130
Score = 178 bits (451), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M ECQ+LL++FGLPYI APMEAEAQCA + LV
Sbjct: 775 EQELRQLRSQQKKDRRDADEVSQVMITECQQLLRLFGLPYITAPMEAEAQCAELVSLGLV 834
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSDVFLFG VYKN+F+ K+VE Y D+EK+ L R KLIR+A LLGSDYT
Sbjct: 835 DGIITDDSDVFLFGGTRVYKNMFNQSKFVECYLTTDLEKEYSLFRTKLIRLAHLLGSDYT 894
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F L FR+W
Sbjct: 895 EGIPGIGPVTALEILTEF---GTLEDFRDW 921
>gi|358375820|dbj|GAA92396.1| DNA excision repair protein Rad2 [Aspergillus kawachii IFO 4308]
Length = 1135
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 106/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M ECQ+LL++FGLPY+ APMEAEAQCA + LV
Sbjct: 777 EQELRQLRSQQKKDRRDADEVSQVMITECQQLLRLFGLPYVTAPMEAEAQCAELVSLGLV 836
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSDVFLFG VYKN+F+ K+VE Y D+EK+ L R KLIR+A LLGSDYT
Sbjct: 837 DGIITDDSDVFLFGGTRVYKNMFNQSKFVECYLTTDLEKEYSLFRTKLIRLAHLLGSDYT 896
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F L +FR+W
Sbjct: 897 EGIPGIGPVTALEILTEF---GTLEEFRDW 923
>gi|452847295|gb|EME49227.1| hypothetical protein DOTSEDRAFT_68105 [Dothistroma septosporum NZE10]
Length = 1395
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 107/150 (71%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L ++QKK R+A+ V+ M ECQ LL++FGLPYI APMEAEAQCA + LV
Sbjct: 999 EKELKQLRNQQKKDRRDADEVTQIMIQECQALLRLFGLPYITAPMEAEAQCAELVHLGLV 1058
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD FLFG +YKN+F+ K+VE Y D+EK+ LTR+KLI +A LLGSDYT
Sbjct: 1059 DGIVTDDSDCFLFGGTRIYKNMFNQAKFVECYLTSDLEKEFDLTRDKLIAVAHLLGSDYT 1118
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
+GI GIG V A+E+++ F L KF+EW
Sbjct: 1119 DGIPGIGPVTALEIISEF---GSLEKFKEW 1145
>gi|395332541|gb|EJF64920.1| PIN domain-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 1217
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 110/151 (72%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L ++K R++E ++ +M ++ +L++FG+PYI APMEAEAQCA + L
Sbjct: 780 IDEEIRELNKQKKNAMRDSEDITQQMISQIMIMLRLFGIPYITAPMEAEAQCAALLSLGL 839
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG++TDDSDVFLFG V KN+F+ K VE + D+E++LGL R+KL+R+A LLGSDY
Sbjct: 840 VDGIITDDSDVFLFGGGRVLKNMFNQSKTVECFLTTDLERELGLDRDKLVRLAYLLGSDY 899
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
TEG+ G+G V A+E+++ FP DGL KF++W
Sbjct: 900 TEGLPGVGPVVAMELLSEFPGHDGLHKFKQW 930
>gi|281350378|gb|EFB25962.1| hypothetical protein PANDA_002828 [Ailuropoda melanoleuca]
Length = 1192
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 159/292 (54%), Gaps = 42/292 (14%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L++ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 742 EELETLENSLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQ 801
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 802 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 861
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPTILG 1026
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 862 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNKKIRPNP---- 917
Query: 1027 KFDVQTGASSRKRRSSDGDKD------------------VNYAKNSVGGVSEFDESISQF 1068
+D + RK + + G + + K + + EF + +
Sbjct: 918 -YDTKVKKKLRKLQLTPGFPNPAVADAYLKPVVDDSRGSFLWGKPDLDKIREFCQRYFGW 976
Query: 1069 DEDKQSAEYSQNMKKIFMDKHTQLRLEAFYTFNERFAK----IRSKRIKKAV 1116
+ K +K++ + TQLR+++F+ ++ + IRS+R+ +AV
Sbjct: 977 NRTKTDESLFPVLKQLNA-QQTQLRIDSFFRLAQQERQDAKGIRSQRLNRAV 1027
>gi|326913904|ref|XP_003203272.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Meleagris gallopavo]
Length = 1121
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 152/281 (54%), Gaps = 37/281 (13%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
L E L ++++ ER A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L +
Sbjct: 697 LSAEQEMLQSQKQQQERVASSVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQ 756
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
G +TDDSDV+LFGAR VYKN F KYVE Y D + LGL R KLI +A LLGSDY
Sbjct: 757 TSGTITDDSDVWLFGARHVYKNFFSQNKYVEYYQYVDFQNQLGLDRSKLINLAYLLGSDY 816
Query: 986 TEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPTILGKFDVQTGAS 1035
TEGI +G V A+E++N FP + L KF EW P+P D +
Sbjct: 817 TEGIPNVGFVTAMEILNEFPGHGLEPLLKFAEWWNEAQKNKKIRPNPR-----DTRVKKK 871
Query: 1036 SRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKK------------ 1083
R+ + S G + A+ + V DE+ F K E + K
Sbjct: 872 LRELQLSSGFPNPAVAEAYLKPV--VDETRGSFTWGKPDVEQIREFCKDHFGWTRTKTDD 929
Query: 1084 IFMD-------KHTQLRLEAFYTFNERFAK-IRSKRIKKAV 1116
I + + TQLR+++F+ + + I+S+R+++AV
Sbjct: 930 ILLPVIKQLNLQQTQLRIDSFFRLEQHEKQAIKSQRLRRAV 970
>gi|451997573|gb|EMD90038.1| hypothetical protein COCHEDRAFT_1106592 [Cochliobolus heterostrophus
C5]
Length = 1297
Score = 177 bits (450), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/224 (44%), Positives = 136/224 (60%), Gaps = 11/224 (4%)
Query: 796 GTSDTSIPLVKTSGNASIYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKAIE-NVHAEA 854
G D + P+V SG I D ++ AE D Y ++ +FA+ A E HA
Sbjct: 848 GPEDLTKPIVPYSG---IADDNVPIDIAEGNDSDQY--SDPEDEELFASLAKEAEEHARF 902
Query: 855 TEKILEEEMQILDH--EYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPME 912
+++ +D E L +QKK R+A+ V+ M +ECQ+LL +FGLPYI APME
Sbjct: 903 AQELSNNTATRVDFDEELKQLRAQQKKDRRDADEVTQTMISECQQLLTLFGLPYITAPME 962
Query: 913 AEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTRE 972
AEAQCA + LVDG+VTDDSD FLFG VYKN+F+ K+VE Y D+ + LTR+
Sbjct: 963 AEAQCAELVNLGLVDGIVTDDSDTFLFGGTRVYKNMFNAAKFVECYLSSDLTSEFSLTRQ 1022
Query: 973 KLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
KLI +A LLGSDYTEG+ GIG V A+E+++ F + L+ FR+W
Sbjct: 1023 KLIDIAQLLGSDYTEGLPGIGPVTALEILSEFQD---LTSFRKW 1063
>gi|390600384|gb|EIN09779.1| PIN domain-like protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 1103
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 109/151 (72%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L ++K R++E ++ +M A+ +L++FG+PYI APMEAEAQCA + L
Sbjct: 702 IDEEIRVLNQQRKAAMRDSEEITHQMVAQIMTMLRLFGIPYITAPMEAEAQCATLNELGL 761
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG++TDDSDVFLFG + V KN+F+ K VE + + D+ ++LGL R+ LIR+A LLGSDY
Sbjct: 762 VDGIITDDSDVFLFGGKRVLKNMFNQSKTVECFLLPDLARELGLDRDTLIRLAYLLGSDY 821
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
TEG+ G+G V A+E++ F EDGL KF++W
Sbjct: 822 TEGLPGVGPVVAMELLKEFQGEDGLHKFKDW 852
>gi|301758086|ref|XP_002914899.1| PREDICTED: DNA repair protein complementing XP-G cells-like
[Ailuropoda melanoleuca]
Length = 1644
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 159/292 (54%), Gaps = 42/292 (14%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L++ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 1194 EELETLENSLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQ 1253
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 1254 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 1313
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPTILG 1026
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 1314 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNKKIRPNP---- 1369
Query: 1027 KFDVQTGASSRKRRSSDGDKD------------------VNYAKNSVGGVSEFDESISQF 1068
+D + RK + + G + + K + + EF + +
Sbjct: 1370 -YDTKVKKKLRKLQLTPGFPNPAVADAYLKPVVDDSRGSFLWGKPDLDKIREFCQRYFGW 1428
Query: 1069 DEDKQSAEYSQNMKKIFMDKHTQLRLEAFYTFNERFAK----IRSKRIKKAV 1116
+ K +K++ + TQLR+++F+ ++ + IRS+R+ +AV
Sbjct: 1429 NRTKTDESLFPVLKQL-NAQQTQLRIDSFFRLAQQERQDAKGIRSQRLNRAV 1479
>gi|354501934|ref|XP_003513043.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Cricetulus griseus]
Length = 1176
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/271 (37%), Positives = 150/271 (55%), Gaps = 28/271 (10%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ ER A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 745 LEAQKQQQERIAASVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITD 804
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 805 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTV 864
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWI---ESPDPTILGKFDVQTGASSRKRRSSDGDKD 1047
G V A+E++N FP D L KF EW ++ D + RK + + G +
Sbjct: 865 GCVTAMEILNEFPGRGLDPLLKFSEWWHEAQTSKKVAANPHDTKVKKKLRKLQLTPGFPN 924
Query: 1048 ------------------VNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
+ K V + EF + +++ K +K++ + +
Sbjct: 925 PAVADAYLRPVVDDSRGSFLWGKPDVDKIREFCQRYFGWNKTKTDESLFPVLKQLNV-QQ 983
Query: 1090 TQLRLEAFYTFNER----FAKIRSKRIKKAV 1116
TQLR+++F+ ++ I+S+R+ +AV
Sbjct: 984 TQLRIDSFFKLAQQEKQDAKHIKSQRLNRAV 1014
>gi|67538092|ref|XP_662820.1| hypothetical protein AN5216.2 [Aspergillus nidulans FGSC A4]
gi|40743207|gb|EAA62397.1| hypothetical protein AN5216.2 [Aspergillus nidulans FGSC A4]
gi|259484675|tpe|CBF81100.1| TPA: single-stranded DNA endonuclease (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 1141
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 109/168 (64%), Gaps = 13/168 (7%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ V+ M ECQ+LL++FGLPYI APMEAEAQCA + LV
Sbjct: 784 EQELKQLRSQQKKDRRDADEVTQIMITECQQLLRLFGLPYITAPMEAEAQCAELVSLGLV 843
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSD+FLFG VYKN+F+ KYVE Y D+EK+ L R KLI A LLGSDYT
Sbjct: 844 DGIITDDSDIFLFGGTRVYKNMFNQSKYVECYLTADLEKEYALHRRKLISFAHLLGSDYT 903
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGA 1034
EGI GIG V A+E++ F L +FR+W VQTGA
Sbjct: 904 EGIPGIGPVTALEILTEF---SSLEEFRDWWTQ----------VQTGA 938
>gi|326474654|gb|EGD98663.1| DNA excision repair protein [Trichophyton tonsurans CBS 112818]
Length = 1119
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M ECQ+LL++FGLPYI APMEAEAQCA + LV
Sbjct: 766 EQELKQLRSQQKKDRRDADEVSQIMVTECQQLLRLFGLPYITAPMEAEAQCAELVTLGLV 825
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD FLFG +YKN+F+ KYVE Y D+EK+ L R+KLI + LLGSDYT
Sbjct: 826 DGIVTDDSDTFLFGGTRIYKNMFNQSKYVECYLSSDLEKEYTLDRKKLISFSHLLGSDYT 885
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F GL +FR+W
Sbjct: 886 EGIPGIGPVTALEILTEF---SGLEEFRDW 912
>gi|71019629|ref|XP_760045.1| hypothetical protein UM03898.1 [Ustilago maydis 521]
gi|46099838|gb|EAK85071.1| hypothetical protein UM03898.1 [Ustilago maydis 521]
Length = 1532
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 75/135 (55%), Positives = 104/135 (77%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
R+ E ++ +M E Q +L++FGLPYI APMEAEAQCA + LVDG++TDDSDVFLFG
Sbjct: 1025 RSEEDITKQMAQEIQMMLRLFGLPYITAPMEAEAQCAELVSRRLVDGIITDDSDVFLFGG 1084
Query: 942 RSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
VYKN+F++ K VE + + D++++LGL REKL+++A LGSDYTEG+ G+G V A+E++
Sbjct: 1085 TRVYKNMFNNNKIVECFLLSDMQRELGLDREKLVQLAYYLGSDYTEGLVGVGPVVAMELL 1144
Query: 1002 NAFPEEDGLSKFREW 1016
FP +DGL KFR+W
Sbjct: 1145 ALFPGQDGLLKFRDW 1159
>gi|121699074|ref|XP_001267903.1| DNA excision repair protein Rad2 [Aspergillus clavatus NRRL 1]
gi|119396045|gb|EAW06477.1| DNA excision repair protein Rad2 [Aspergillus clavatus NRRL 1]
Length = 1140
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ V+ M ECQ+LL++FGLPY+ APMEAEAQCA + LV
Sbjct: 795 EQELQQLRSQQKKDRRDADEVTQVMITECQQLLRLFGLPYVTAPMEAEAQCAELVSLGLV 854
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSD+FLFG VYKN+F+ KYVE Y D+EK+ L R KLI A LLGSDYT
Sbjct: 855 DGIITDDSDIFLFGGTRVYKNMFNQSKYVECYLTSDMEKEYALQRRKLISFAHLLGSDYT 914
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGISGIG V A+E++ F L +FR+W
Sbjct: 915 EGISGIGPVTALEILTEF---SSLEEFRDW 941
>gi|440901361|gb|ELR52322.1| DNA repair protein complementing XP-G cells [Bos grunniens mutus]
Length = 1202
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 152/276 (55%), Gaps = 38/276 (13%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 767 LKSQKQQQERVAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQTSGTITD 826
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 827 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTV 886
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPTILGKFDVQTGASSRKRRSS 1042
G V A+E++N FP + L KF EW P+P +D + RK + +
Sbjct: 887 GCVTAMEILNEFPGHGLEPLRKFSEWWHEAQENKKIRPNP-----YDTKVKKKLRKLQLT 941
Query: 1043 DGDKD------------------VNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKI 1084
G + + K + + EF + ++ K +K++
Sbjct: 942 PGFPNPAVADAYLKPVVDESKGSFLWGKPDLDKIREFCQRYFGWNRTKTDESLFPVLKQL 1001
Query: 1085 FMDKHTQLRLEAFYTFNERFAK----IRSKRIKKAV 1116
+ + TQLR+++F+ ++ + I+S+R+ +AV
Sbjct: 1002 NVHQ-TQLRIDSFFRLAQQEKQEAKGIKSQRLNRAV 1036
>gi|326482848|gb|EGE06858.1| DNA-repair protein rad13 [Trichophyton equinum CBS 127.97]
Length = 1119
Score = 177 bits (449), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/150 (56%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M ECQ+LL++FGLPYI APMEAEAQCA + LV
Sbjct: 766 EQELKQLRSQQKKDRRDADEVSQIMVTECQQLLRLFGLPYITAPMEAEAQCAELVTLGLV 825
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD FLFG +YKN+F+ KYVE Y D+EK+ L R+KLI + LLGSDYT
Sbjct: 826 DGIVTDDSDTFLFGGTRIYKNMFNQSKYVECYLSSDLEKEYTLDRKKLISFSHLLGSDYT 885
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F GL +FR+W
Sbjct: 886 EGIPGIGPVTALEILTEF---SGLEEFRDW 912
>gi|119468577|ref|XP_001257869.1| DNA excision repair protein Rad2 [Neosartorya fischeri NRRL 181]
gi|119406021|gb|EAW15972.1| DNA excision repair protein Rad2 [Neosartorya fischeri NRRL 181]
Length = 1132
Score = 177 bits (449), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ V+ M ECQ+LL +FGLPYI APMEAEAQCA + LV
Sbjct: 777 EQELRQLRSQQKKDRRDADEVTQVMITECQQLLSLFGLPYITAPMEAEAQCAELVSLGLV 836
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI +A LLGSDYT
Sbjct: 837 DGIITDDSDIFLFGGTRVYKNMFNQGKFVECYLTSDMEKEYALHRRKLISLAHLLGSDYT 896
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGISGIG V A+E++ F L +FR+W
Sbjct: 897 EGISGIGPVTALEILTEF---SSLQEFRDW 923
>gi|358060342|dbj|GAA93747.1| hypothetical protein E5Q_00393 [Mixia osmundae IAM 14324]
Length = 1209
Score = 177 bits (449), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 111/158 (70%)
Query: 859 LEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
L+E Q ++ E LG +QK RNA+ ++ +M E + +L++FG+PY+ APMEAEAQCA
Sbjct: 787 LDEMRQEVEAEIKVLGQQQKTDRRNADEITQQMAKEIRVMLRLFGIPYVDAPMEAEAQCA 846
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMA 978
+ +A LVDG++TDDSDVFLFG V+KN+F+ KYVE + + DIE++L L R+KL ++A
Sbjct: 847 QLWMAGLVDGIITDDSDVFLFGGGRVFKNMFNQNKYVECFLLSDIERELSLDRDKLCKLA 906
Query: 979 LLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
LGSDY EG+ +G V +E++ FP GL +FR W
Sbjct: 907 YFLGSDYVEGLPKVGPVLGMELMREFPGPAGLVEFRRW 944
>gi|432852332|ref|XP_004067195.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Oryzias latipes]
Length = 1078
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 171/302 (56%), Gaps = 31/302 (10%)
Query: 844 TKAIENVHAEATEKILEEEMQILDH----EYMYLGDEQKKLERNAESVSSEMFAECQELL 899
TKA + E++ E+++ L++ E L D++++ ER A +V+ +M+ E QELL
Sbjct: 638 TKAAPALAVNEWEQLDMEDLEALENSLQMEQSNLKDQKQQQERMANTVTGQMYLESQELL 697
Query: 900 QMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYF 959
++FG+P+++APMEAEAQCA ++ A+ G +TDDSDV+LFG R VYKN F KYVE Y
Sbjct: 698 RLFGVPFLVAPMEAEAQCAALDRADQTHGTITDDSDVWLFGGRHVYKNFFSQNKYVEHYQ 757
Query: 960 MQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWI 1017
D++ LGL R K+I +A LLGSDY EG+ G+G V +E++N FP + L +F +W
Sbjct: 758 YSDLQNQLGLDRAKMINLAYLLGSDYAEGVPGVGYVTGMEILNEFPGPGLEPLKQFSQWW 817
Query: 1018 E--------SPDP------TILGKFDVQTGASSRKRRSSDGDKDVN-------YAKNSVG 1056
+ DP L +Q+G + + + V+ + + +
Sbjct: 818 SQAQENKRLTADPQDTKVKKKLRALKLQSGFPNPAVAQAYLEPAVDPSCSSFSWGRPQLD 877
Query: 1057 GVSEFDESISQFD-EDKQSAEYSQNMKKIFMDKHTQLRLEAFYTFNERFAK-IRSKRIKK 1114
+ EF +S+F +++ E Q + K + TQLR+++F+ ++ + I S+R+++
Sbjct: 878 VIKEF--CLSRFGWSSRKTEEILQPVVKQLNSQQTQLRIDSFFRMEQQEKQVIHSQRLRR 935
Query: 1115 AV 1116
AV
Sbjct: 936 AV 937
>gi|426236893|ref|XP_004012399.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein complementing XP-G
cells [Ovis aries]
Length = 1200
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 152/276 (55%), Gaps = 38/276 (13%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 758 LKAQKQQQERVAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQTSGTITD 817
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 818 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTV 877
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPTILGKFDVQTGASSRKRRSS 1042
G V A+E++N FP + L KF EW P+P +D + RK + +
Sbjct: 878 GCVTAMEILNEFPGHGLEPLQKFSEWWHEAQENKKIRPNP-----YDTKVKKKLRKLQLT 932
Query: 1043 DGDKD------------------VNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKI 1084
G + + K + + EF + ++ K +K++
Sbjct: 933 PGFPNPAVADAYLKPVVDESKGSFLWGKPDLDKIREFCQRYFGWNRTKTDESLFPVLKQL 992
Query: 1085 FMDKHTQLRLEAFYTFNERFAK----IRSKRIKKAV 1116
+ + TQLR+++F+ ++ + I+S+R+ +AV
Sbjct: 993 NVHQ-TQLRIDSFFRLAQQEKQEAKGIKSQRLNRAV 1027
>gi|295662156|ref|XP_002791632.1| DNA-repair protein rad13 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279758|gb|EEH35324.1| DNA-repair protein rad13 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1178
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 129/214 (60%), Gaps = 11/214 (5%)
Query: 811 ASIYDTDIEQKSAEERTP-----DTYLK-DSKQNTGIFATKAIENVHAEATEKILEEEMQ 864
A IY T E ++ TP D YL + ++ T+A E+ +T +
Sbjct: 759 ADIYKTSNETDQQDDSTPYSDAGDDYLDFEDEELMHQLQTEAEEHARFASTLNFKSQAEN 818
Query: 865 ILDHE--YMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL 922
D+E L +QKK R+A+ VS M +ECQELL++FGLPYI APMEAEAQCA +
Sbjct: 819 AFDYEQELKQLRSQQKKDRRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELVS 878
Query: 923 ANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLG 982
LVDGVVTDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI+ A LLG
Sbjct: 879 LGLVDGVVTDDSDIFLFGGTRVYKNMFNQVKFVECYLNSDLEKEYDLDRRKLIQFAHLLG 938
Query: 983 SDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
SDYTEGI G+G V A+E++ F L FR+W
Sbjct: 939 SDYTEGIPGVGPVTALEILTEF---STLEDFRDW 969
>gi|78369362|ref|NP_001030353.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Bos taurus]
gi|77567831|gb|AAI07529.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Bos taurus]
gi|296481618|tpg|DAA23733.1| TPA: XPG-complementing protein [Bos taurus]
Length = 1201
Score = 177 bits (448), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 152/276 (55%), Gaps = 38/276 (13%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 766 LKAQKQQQERVAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQTSGTITD 825
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 826 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTV 885
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPTILGKFDVQTGASSRKRRSS 1042
G V A+E++N FP + L KF EW P+P +D + RK + +
Sbjct: 886 GCVTAMEILNEFPGHGLEPLRKFSEWWHEAQENKKIRPNP-----YDTKVKKKLRKLQLT 940
Query: 1043 DGDKD------------------VNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKI 1084
G + + K + + EF + ++ K +K++
Sbjct: 941 PGFPNPAVADAYLKPVVDESKGSFLWGKPDLDKIREFCQRYFGWNRTKTDESLFPVLKQL 1000
Query: 1085 FMDKHTQLRLEAFYTFNERFAK----IRSKRIKKAV 1116
+ + TQLR+++F+ ++ + I+S+R+ +AV
Sbjct: 1001 NVHQ-TQLRIDSFFRLAQQEKQEAKGIKSQRLNRAV 1035
>gi|350417449|ref|XP_003491427.1| PREDICTED: DNA repair protein complementing XP-G cells-like [Bombus
impatiens]
Length = 1107
Score = 177 bits (448), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 167/299 (55%), Gaps = 28/299 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
KLER +S ++ E QELL++FG+PYIIAPMEAEAQCAY+E +L+DG +TDDSD++L
Sbjct: 726 KLERQGIDISDQIQIEAQELLRLFGIPYIIAPMEAEAQCAYLEQIHLIDGTITDDSDIWL 785
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
FG + VYKN FD+ K V + DI+ LTR ++IR+ALL+GSDYT G++GIG V A+
Sbjct: 786 FGGQCVYKNFFDNNKKVLEFRSCDIQHYFKLTRNEMIRLALLVGSDYTTGLTGIGPVTAL 845
Query: 999 EVVNAFPEE-----DGLSKFREWIE---SPDP------TILGKFDVQTGASSRKR----- 1039
E++ AFP E GL F WIE + P T L +Q G S+
Sbjct: 846 EILAAFPSEGDDLLQGLINFSSWIENGKTAGPGKANLRTKLQNLQIQKGFPSQAVVQAYL 905
Query: 1040 --RSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAF 1097
+ + + + K ++ ++++ + +D++K +K++ +K +Q ++ A+
Sbjct: 906 SPKVDESKETFTWGKPNIILLADYVKQKFGWDKNKYDKIIEPVLKRL-QEKQSQQKINAY 964
Query: 1098 YTFNERFAKIR---SKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRKNNGLENGNNR 1153
+ I SKR++KAV+ ++ D E ++ K+K + +EN R
Sbjct: 965 FKLQTIPKSIEMNLSKRVQKAVQKLSNENK---EDSISVESTQQSIKKKRSLVENRKKR 1020
>gi|351703064|gb|EHB05983.1| DNA repair protein complementing XP-G cells [Heterocephalus glaber]
Length = 1026
Score = 177 bits (448), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 161/297 (54%), Gaps = 39/297 (13%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 569 EELETLESDLLAQQNSLHAQKQQQERVASTVTGQMFLESQELLRLFGVPYIQAPMEAEAQ 628
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 629 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKDKFVEYYQYVDFHNQLGLDRNKLIN 688
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPT--- 1023
+A LLGSDYTEGI +G V A+E++N FP D L KF EW + P+P
Sbjct: 689 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGRGLDPLLKFSEWWQEAQKNRKVRPNPNDTK 748
Query: 1024 ---ILGKFDVQTG------ASSRKRRSSD--------GDKDVNYAKNSVGGVSEFDESIS 1066
L K + G A + R D G D++ + + F +
Sbjct: 749 VKKQLRKLQLTPGFPNPAVAEAYLRPVVDDSKGAFLWGKPDLDKIREYPWCLQTFCQRYF 808
Query: 1067 QFDEDKQSAEYSQNMKKIFMDKHTQLRLEAFYTFNER----FAKIRSKRIKKAVKGI 1119
+ K S +K++ + TQLR+++F+ ++ +I+S+R+ +AV I
Sbjct: 809 GWSRTKTDESLSPVLKQL-SAQQTQLRIDSFFRIAQQEKQDAKRIKSQRLNRAVTCI 864
>gi|336370553|gb|EGN98893.1| hypothetical protein SERLA73DRAFT_108084 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1055
Score = 176 bits (447), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 110/151 (72%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L ++K R++E ++ +M ++ LL++FG+PYI APMEAEAQCA + L
Sbjct: 718 IDEEIRTLNHQKKAAMRDSEDITQQMISQIMLLLRLFGIPYITAPMEAEAQCAELVSLGL 777
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG++TDDSDVFLFG + V+KN+F+ K VE + + D+ ++LGL R LIR+A LLGSDY
Sbjct: 778 VDGIITDDSDVFLFGGQRVFKNMFNQSKTVECFLLSDLGRELGLERGTLIRLAYLLGSDY 837
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EG+SG+G V A+E++ FP EDGL KF++W
Sbjct: 838 VEGLSGVGPVVAMELLKEFPGEDGLHKFKDW 868
>gi|159124202|gb|EDP49320.1| DNA excision repair protein Rad2 [Aspergillus fumigatus A1163]
Length = 1130
Score = 176 bits (447), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ V+ M ECQ+LL +FGLPYI APMEAEAQCA + LV
Sbjct: 775 EQELRQLRSQQKKDRRDADEVTQVMITECQQLLSLFGLPYITAPMEAEAQCAELVSLGLV 834
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI +A LLGSDYT
Sbjct: 835 DGIITDDSDIFLFGGTRVYKNMFNQGKFVECYLTSDMEKEYALHRRKLISLAHLLGSDYT 894
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGISGIG V A+E++ F L +FR+W
Sbjct: 895 EGISGIGPVTALEILTEF---SSLEEFRDW 921
>gi|396470540|ref|XP_003838668.1| similar to DNA excision repair protein Rad2 [Leptosphaeria maculans
JN3]
gi|312215236|emb|CBX95189.1| similar to DNA excision repair protein Rad2 [Leptosphaeria maculans
JN3]
Length = 1312
Score = 176 bits (446), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 104/151 (68%), Gaps = 3/151 (1%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
D E L +QKK R+A+ V+ M ECQ LL +FGLPYI APMEAEAQCA + L
Sbjct: 947 FDKELKQLRAQQKKDRRDADEVTQTMITECQHLLTLFGLPYITAPMEAEAQCAELVSLGL 1006
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG+VTDDSD FLFG VYKN+F+ K+VE Y D+ + LTR+KLI +A LLGSDY
Sbjct: 1007 VDGIVTDDSDTFLFGGTRVYKNMFNAAKFVECYLASDLASEFSLTRDKLIAIAQLLGSDY 1066
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
T GI GIG V A+E+++ FP+ L +F++W
Sbjct: 1067 TPGIPGIGPVTALEILSEFPD---LEQFKQW 1094
>gi|355686469|gb|AER98068.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Mustela putorius furo]
Length = 1003
Score = 176 bits (446), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 158/292 (54%), Gaps = 42/292 (14%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 553 EELETLESSLLTQQNSLEAQKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQ 612
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 613 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 672
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPTILG 1026
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 673 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGPGLEPLLKFSEWWHEAQKNKKIRPNP---- 728
Query: 1027 KFDVQTGASSRKRRSSDGDKD------------------VNYAKNSVGGVSEFDESISQF 1068
+D + RK + + G + + K + + EF + +
Sbjct: 729 -YDTKVKKKLRKLQLTPGFPNPAVADAYLKPVVDESRGAFLWGKPDLDKIREFCQRYFGW 787
Query: 1069 DEDKQSAEYSQNMKKIFMDKHTQLRLEAFYTFNERFAK----IRSKRIKKAV 1116
+ K +K++ + TQLR+++F+ ++ + IRS+R+ +AV
Sbjct: 788 NRTKTDESLFPVLKQLNA-QQTQLRIDSFFRLAQQERQDAKGIRSQRLNRAV 838
>gi|213404960|ref|XP_002173252.1| DNA-repair protein rad13 [Schizosaccharomyces japonicus yFS275]
gi|212001299|gb|EEB06959.1| DNA-repair protein rad13 [Schizosaccharomyces japonicus yFS275]
Length = 1199
Score = 176 bits (446), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 103/136 (75%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
R+A+ V+ EM ECQELL+ FGLPYI+AP EAEAQCA + LVDGVVTDDSDVFLFG
Sbjct: 817 RDADEVNQEMVRECQELLRYFGLPYIVAPQEAEAQCAKLLELKLVDGVVTDDSDVFLFGG 876
Query: 942 RSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+Y+N+F+ K+VE Y D+E+D + R++LI++A LLGSDYTEG+S +G V+A+E++
Sbjct: 877 TRIYRNMFNQSKFVELYLSSDMERDFAIGRKQLIQLAYLLGSDYTEGLSSVGPVSAVEIL 936
Query: 1002 NAFPEEDGLSKFREWI 1017
FP ++ L +F+ W
Sbjct: 937 REFPGDNPLIEFKRWF 952
>gi|443920093|gb|ELU40082.1| flap structure-specific endonuclease [Rhizoctonia solani AG-1 IA]
Length = 1377
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 111/151 (73%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
LD E L E+ R+AE V+++M A+ Q LL++FG+P++ APMEAEAQCA++ L
Sbjct: 924 LDAEIAALRKERAAALRDAEDVTAQMSAQIQILLRLFGVPFVNAPMEAEAQCAFLAQHGL 983
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
V+GV+TDDSDVFLFGA VY+N+F+ K VE + D++++LGL RE LI +A LLGSDY
Sbjct: 984 VEGVITDDSDVFLFGAGRVYRNMFNQSKTVECFLAADLDRELGLDRETLISLAYLLGSDY 1043
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
TEG+ G+G V A+E++ FP E+GL +F +W
Sbjct: 1044 TEGLPGVGPVVAMEIMKEFPGENGLREFCKW 1074
>gi|317140876|ref|XP_001818459.2| single-stranded DNA endonuclease [Aspergillus oryzae RIB40]
Length = 1135
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 104/150 (69%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M +ECQ+LL +FGLPYI APMEAEAQCA + LV
Sbjct: 782 EQELKQLRSQQKKDRRDADEVSQIMISECQQLLTLFGLPYITAPMEAEAQCAELVALGLV 841
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI A LLGSDYT
Sbjct: 842 DGIITDDSDIFLFGGTRVYKNMFNQGKFVECYLTSDLEKEYALHRRKLISFAHLLGSDYT 901
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F L +FR+W
Sbjct: 902 EGIPGIGPVTALEILTEF---SNLEEFRDW 928
>gi|238484915|ref|XP_002373696.1| DNA excision repair protein Rad2 [Aspergillus flavus NRRL3357]
gi|220701746|gb|EED58084.1| DNA excision repair protein Rad2 [Aspergillus flavus NRRL3357]
Length = 1135
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 104/150 (69%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M +ECQ+LL +FGLPYI APMEAEAQCA + LV
Sbjct: 782 EQELKQLRSQQKKDRRDADEVSQIMISECQQLLTLFGLPYITAPMEAEAQCAELVALGLV 841
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI A LLGSDYT
Sbjct: 842 DGIITDDSDIFLFGGTRVYKNMFNQGKFVECYLTSDLEKEYALHRRKLISFAHLLGSDYT 901
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F L +FR+W
Sbjct: 902 EGIPGIGPVTALEILTEF---SNLEEFRDW 928
>gi|330917946|ref|XP_003298025.1| hypothetical protein PTT_08606 [Pyrenophora teres f. teres 0-1]
gi|311328997|gb|EFQ93872.1| hypothetical protein PTT_08606 [Pyrenophora teres f. teres 0-1]
Length = 1293
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 103/151 (68%), Gaps = 3/151 (1%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
D E L +QKK R+A+ V+ M AECQ+LL +FGLPY+ APMEAEAQCA + L
Sbjct: 916 FDEELKQLRAQQKKDRRDADEVTQTMIAECQQLLTLFGLPYVTAPMEAEAQCAELVNLGL 975
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG+VTDDSD FLFG VYKN+F+ K+VE Y QD+ + LTREK+I +A LLGSDY
Sbjct: 976 VDGIVTDDSDTFLFGGTRVYKNMFNAAKFVECYLAQDLASEFSLTREKMIAIAQLLGSDY 1035
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
T GI GIG V A+E+++ F L FR W
Sbjct: 1036 TTGIPGIGPVTALEILSEF---QTLEAFRAW 1063
>gi|77736641|ref|NP_001029995.1| XPG-complementing protein [Gallus gallus]
gi|71725078|dbj|BAE16755.1| XPG [Gallus gallus]
Length = 1118
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 152/281 (54%), Gaps = 37/281 (13%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
L E L ++++ ER A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L +
Sbjct: 697 LSAEQEMLQSQKQQQERVATSVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQ 756
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
G +TDDSDV+LFGAR VYKN F KYVE Y D + LGL R KLI +A LLGSDY
Sbjct: 757 TSGTITDDSDVWLFGARHVYKNFFSRNKYVEYYQYIDFQNQLGLDRSKLINLAYLLGSDY 816
Query: 986 TEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPTILGKFDVQTGAS 1035
TEGI +G V A+E++N FP + L KF EW P+P D +
Sbjct: 817 TEGIPNVGFVTAMEILNEFPGHGLEPLLKFAEWWNEAQKNKKIRPNPR-----DTKVKKK 871
Query: 1036 SRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKK------------ 1083
R+ + S G + A+ + V DE+ F K E + K
Sbjct: 872 LRELQLSSGFPNPAVAEAYLKPV--VDETRGSFIWGKPDVEQIREFCKDHFGWTRTKTDE 929
Query: 1084 IFMD-------KHTQLRLEAFYTFNERFAK-IRSKRIKKAV 1116
I + + TQLR+++F+ + + I+S+R+++AV
Sbjct: 930 ILLPVIKQLNLQQTQLRIDSFFRLAQHEKQVIKSQRLRRAV 970
>gi|392577233|gb|EIW70362.1| hypothetical protein TREMEDRAFT_43101 [Tremella mesenterica DSM 1558]
Length = 1306
Score = 176 bits (445), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 106/151 (70%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L K R+A+ +++ M A+ Q LL+ FG+PYI APMEAEAQCA + L
Sbjct: 881 IDDEIRVLHSAAKLAARDADEITAPMIAQIQTLLRHFGIPYITAPMEAEAQCAKLATLGL 940
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG++TDDSDVFLFG +KNIF+D KYVE + DI++++ L RE+LI +A LLGSDY
Sbjct: 941 VDGIITDDSDVFLFGGNQCFKNIFNDSKYVECFLSSDIQREISLDRERLISLAYLLGSDY 1000
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
T G+ G+G V A+E+++ FP GL +F+EW
Sbjct: 1001 TIGLPGVGPVIALELLSNFPGRRGLEEFKEW 1031
>gi|402902426|ref|XP_003914105.1| PREDICTED: DNA repair protein complementing XP-G cells [Papio anubis]
Length = 1814
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L E+++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 1366 EELETLESNLLAQQNSLKAEKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 1425
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 1426 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 1485
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIE--------SPDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 1486 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 1545
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 1546 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 1605
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 1606 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1651
>gi|189202272|ref|XP_001937472.1| DNA-repair protein rad13 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187984571|gb|EDU50059.1| DNA-repair protein rad13 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1222
Score = 175 bits (444), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 103/151 (68%), Gaps = 3/151 (1%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
D E L +QKK R+A+ V+ M AECQ+LL +FGLPYI APMEAEAQCA + L
Sbjct: 914 FDEELKQLRAQQKKDRRDADEVTQTMIAECQQLLTLFGLPYITAPMEAEAQCAELVNLGL 973
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG+VTDDSD FLFG VYKN+F+ K+VE Y QD+ + LTREK+I +A LLGSDY
Sbjct: 974 VDGIVTDDSDTFLFGGTRVYKNMFNAAKFVECYLAQDLTSEFNLTREKMIDIAQLLGSDY 1033
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
T GI GIG V A+E+++ F L FR W
Sbjct: 1034 TTGIPGIGPVTALEILSEF---QTLEAFRTW 1061
>gi|348583617|ref|XP_003477569.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein complementing XP-G
cells-like [Cavia porcellus]
Length = 1169
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 191/365 (52%), Gaps = 55/365 (15%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + + L ++++ ER A +VS +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 716 EELESLESDLLAQQNSLSAQKQQQERIASTVSGQMFLESQELLRLFGVPYIQAPMEAEAQ 775
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +T+DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 776 CAILDLTDQTSGTITEDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 835
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL------SKFREWIES--------PDP 1022
+A LLGSDYTEGI +G + A+E++N FP G+ S++REW + P+P
Sbjct: 836 LAYLLGSDYTEGIPTVGCITAMEILNEFPGH-GMNLCLIASRYREWWQEAQKNPKIRPNP 894
Query: 1023 ------TILGKFDVQTG------ASSRKRRSSDGDK-DVNYAKNSVGGVSEFDESISQFD 1069
L K + G A + R D K + + V + EF + +
Sbjct: 895 HDTKVKKKLRKLQLTPGFPNPAVADAYLRPVVDDSKGSFLWGRPDVDKIREFCQRYFGWS 954
Query: 1070 EDKQSAEYSQNMKKIFMDKHTQLRLEAFYTFNER----FAKIRSKRIKKAVKGITGS--- 1122
K +K++ + TQLR+++F+ ++ +I+S+R+ +AV +
Sbjct: 955 RTKTDESLFPVLKQLSA-QQTQLRVDSFFRMAQQERQETKRIKSQRLSRAVTCMLRKERE 1013
Query: 1123 ------QSLLLMDDAGQEVSKSRKKRKNNGLENGNNRSQKAPKKAEESVSGAQNNMEKSS 1176
+++ + + E+ K++ G NR+Q KAEE+ S + + +SS
Sbjct: 1014 AAASELEAVSVAMEKESEILDEEKEKAQKG-----NRAQ----KAEEAASLKRKRVSESS 1064
Query: 1177 QSQSR 1181
Q SR
Sbjct: 1065 QEGSR 1069
>gi|115390695|ref|XP_001212852.1| hypothetical protein ATEG_03674 [Aspergillus terreus NIH2624]
gi|114193776|gb|EAU35476.1| hypothetical protein ATEG_03674 [Aspergillus terreus NIH2624]
Length = 1131
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 104/150 (69%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M +ECQ+LL +FGLPYI APMEAEAQCA + LV
Sbjct: 802 EQELKQLRSQQKKDRRDADEVSQIMISECQQLLTLFGLPYITAPMEAEAQCAELVSLGLV 861
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI A LLGSDYT
Sbjct: 862 DGIITDDSDIFLFGGTRVYKNMFNQSKFVECYLTSDLEKEYALHRRKLISFAHLLGSDYT 921
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI G+G V A+E++ F L +FR+W
Sbjct: 922 EGIPGVGPVTALEILTEF---SSLEEFRDW 948
>gi|226289636|gb|EEH45120.1| DNA-repair protein rad13 [Paracoccidioides brasiliensis Pb18]
Length = 1178
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M +ECQELL++FGLPYI APMEAEAQCA + LV
Sbjct: 823 EQELKQLRSQQKKDRRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELVSLGLV 882
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DGVVTDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI+ A LLGSDYT
Sbjct: 883 DGVVTDDSDIFLFGGTRVYKNMFNQVKFVECYLNSDLEKEYDLDRRKLIQFAHLLGSDYT 942
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI G+G V A+E++ F L FR+W
Sbjct: 943 EGIPGVGPVTALEILTEF---STLEDFRDW 969
>gi|297274789|ref|XP_002800868.1| PREDICTED: DNA repair protein complementing XP-G cells isoform 2
[Macaca mulatta]
Length = 1040
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L E+++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 592 EELETLESNLLAQQNSLKAEKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 651
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 652 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 711
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 712 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 771
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 772 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLEKIREFCQRYFGWNRTKT 831
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 832 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 877
>gi|380025170|ref|XP_003696351.1| PREDICTED: DNA repair protein complementing XP-G cells homolog [Apis
florea]
Length = 1095
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 170/301 (56%), Gaps = 36/301 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
KLER +S ++ E QELL++FG+PY++APMEAEAQCAY+E +L DG +TDDSD++L
Sbjct: 714 KLERQGIDISDQIRIEAQELLKLFGIPYLVAPMEAEAQCAYLEQIHLTDGTITDDSDIWL 773
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
FG + VYKN FD+ K V + DI++ LTR ++IR+ALL+GSDYT G++GIG V A+
Sbjct: 774 FGGQCVYKNFFDNNKKVLEFRACDIQRYFKLTRNEMIRLALLVGSDYTTGLTGIGPVTAL 833
Query: 999 EVVNAFPEE-----DGLSKFREWIES-----PDPTI----LGKFDVQTGASSRKRRSS-- 1042
E++ AFP E GL F WIE+ P T L ++Q G S+ +
Sbjct: 834 EILAAFPSEGENLLQGLVNFCSWIENGKVAGPGKTSLRNKLQNLEIQKGFPSQAVVQAYL 893
Query: 1043 -----DGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAF 1097
+ + ++ K ++ + ++ + +D+DK + + +K++ +K Q +++A+
Sbjct: 894 APMVDESKETFSWGKPNIIILGDYAKQKFGWDKDKYNKIITPVLKRL-EEKQIQNKIDAY 952
Query: 1098 YTFNE--RFAKIR-SKRIKKAV-----------KGITGSQSLLLMDDAGQEVSKSRKKRK 1143
+ R +I S+R++KAV K I QSL + E K RK+ K
Sbjct: 953 FKLQTIPRSIEINLSQRVQKAVEKLNNDNVKDFKRIENVQSLQKKQKSSNENQKKRKELK 1012
Query: 1144 N 1144
N
Sbjct: 1013 N 1013
>gi|403272924|ref|XP_003928284.1| PREDICTED: DNA repair protein complementing XP-G cells [Saimiri
boliviensis boliviensis]
Length = 1638
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/274 (36%), Positives = 147/274 (53%), Gaps = 28/274 (10%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 1203 LKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITD 1262
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 1263 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTV 1322
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP-------------TILGKFD 1029
G V A+E++N FP + L KF EW P+P G +
Sbjct: 1323 GCVTAMEILNEFPGRGLEPLLKFSEWWHEAQKNPKIRPNPHDTKVKKKLRTLQLTPGFPN 1382
Query: 1030 VQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
+ K D + K + + EF + ++ K +K++ +
Sbjct: 1383 PAIAEAYLKPVVDDSQGSFLWGKPDLDKIREFCQRYFGWNRTKTDESLFPVLKQL-NAQQ 1441
Query: 1090 TQLRLEAFYTF----NERFAKIRSKRIKKAVKGI 1119
TQLR+++F+ E +I+S+R+ +AV I
Sbjct: 1442 TQLRIDSFFRLAQQEKEDAKRIKSQRLNRAVTCI 1475
>gi|225682262|gb|EEH20546.1| DNA-repair protein rad13 [Paracoccidioides brasiliensis Pb03]
Length = 1233
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M +ECQELL++FGLPYI APMEAEAQCA + LV
Sbjct: 878 EQELKQLRSQQKKDRRDADEVSHIMVSECQELLRLFGLPYITAPMEAEAQCAELVSLGLV 937
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DGVVTDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI+ A LLGSDYT
Sbjct: 938 DGVVTDDSDIFLFGGTRVYKNMFNQVKFVECYLNSDLEKEYDLDRRKLIQFAHLLGSDYT 997
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI G+G V A+E++ F L FR+W
Sbjct: 998 EGIPGVGPVTALEILTEF---STLEDFRDW 1024
>gi|296818415|ref|XP_002849544.1| DNA excision repair protein Rad2 [Arthroderma otae CBS 113480]
gi|238839997|gb|EEQ29659.1| DNA excision repair protein Rad2 [Arthroderma otae CBS 113480]
Length = 1066
Score = 175 bits (443), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 104/150 (69%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M ECQ+LL++FGLPYI APMEAEAQCA + LV
Sbjct: 673 EQELKQLRSQQKKDRRDADEVSHIMVTECQQLLRLFGLPYITAPMEAEAQCAELVSLGLV 732
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD FLFG +YKN+F+ KYVE Y D+EK+ L R+KLI + LLGSDYT
Sbjct: 733 DGIVTDDSDTFLFGGTRIYKNMFNQSKYVECYLSSDLEKEYTLDRKKLISFSHLLGSDYT 792
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F L +FR+W
Sbjct: 793 EGIPGIGPVTALEILTEF---SSLEEFRDW 819
>gi|258577255|ref|XP_002542809.1| hypothetical protein UREG_02325 [Uncinocarpus reesii 1704]
gi|237903075|gb|EEP77476.1| hypothetical protein UREG_02325 [Uncinocarpus reesii 1704]
Length = 1143
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 105/151 (69%), Gaps = 3/151 (1%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
D E L +QKK R+A+ VS M ECQ+LL++FGLPYI APMEAEAQCA + L
Sbjct: 791 FDRELKQLRAQQKKDRRDADEVSHIMVTECQQLLKLFGLPYITAPMEAEAQCAELVSLGL 850
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG+VTDDSD FLFG VYKN+F+ K+VE Y + D+EK+ L R+KLI A LLGSDY
Sbjct: 851 VDGIVTDDSDTFLFGGTRVYKNMFNQAKFVECYLVSDLEKEYSLDRKKLISFAHLLGSDY 910
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
TEGI GIG V A+E++ F + L F++W
Sbjct: 911 TEGIPGIGPVTALEILTEFSD---LEDFKDW 938
>gi|134106579|ref|XP_778300.1| hypothetical protein CNBA3000 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50261003|gb|EAL23653.1| hypothetical protein CNBA3000 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1323
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 104/151 (68%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L E + R+++ ++ M A+ Q LL+ FG+PYI APMEAEAQCA + L
Sbjct: 922 IDDEIRVLNSENRVAMRDSDEITQSMIAQIQTLLRHFGIPYITAPMEAEAQCAKLAQLGL 981
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG++TDDSDVFLFG +KNIF+D KY E + + D+E++L LTRE+LI +A LGSDY
Sbjct: 982 VDGIITDDSDVFLFGGVQCFKNIFNDAKYAECFLLADVERELMLTRERLISLAYFLGSDY 1041
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
T G+ GIG V +E++ FP E GL F+EW
Sbjct: 1042 TLGLPGIGPVMGLEILANFPGERGLYDFKEW 1072
>gi|392595001|gb|EIW84325.1| hypothetical protein CONPUDRAFT_100293 [Coniophora puteana RWD-64-598
SS2]
Length = 1485
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 109/151 (72%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L ++K R+++ ++++M ++ +L++FG+PYI APMEAEAQCA + L
Sbjct: 928 IDDEIRVLNQQKKAAMRDSDDITTQMISQIMLMLRLFGIPYITAPMEAEAQCAELVQLGL 987
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
V+GV+TDDSDVFLFG V+KN+F+ K VE + + D+ ++LGL R+ L+R+A LLGSDY
Sbjct: 988 VEGVITDDSDVFLFGGLRVFKNMFNQSKTVECFLLSDLARELGLERDTLVRLAYLLGSDY 1047
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EG+ G+G V A+E++ FP DGL KFR+W
Sbjct: 1048 VEGLPGVGPVVAMELLKEFPGADGLHKFRDW 1078
>gi|1209080|gb|AAA91039.1| XPG [Mus musculus]
gi|1209097|gb|AAB17885.1| XPG [Mus musculus]
Length = 1170
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 171/323 (52%), Gaps = 41/323 (12%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ +R A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L++ G +TD
Sbjct: 749 LKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLSDQTSGTITD 808
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 809 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYSQLGLDRNKLINLAYLLGSDYTEGIPTV 868
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWI----------ESPDPTILGK----------FDV 1030
G V A+E++N FP D L KF EW E+P T + K F
Sbjct: 869 GCVTAMEILNEFPGRGLDPLLKFSEWWHEAQNNKKVAENPYDTKVKKKLRKLQLTPGFPN 928
Query: 1031 QTGASSRKRRSSDGDK-DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
A + R D + + K V + EF + ++ K +K ++ H
Sbjct: 929 PAVADAYLRPVVDDSRGSFLWGKPDVDKIREFCQRYFGWNRMKTDESLYPVLKH--LNAH 986
Query: 1090 -TQLRLEAFYTFNERFAK----IRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRKN 1144
TQLR+++F+ ++ + I+S R+ +AV I + ++ E++K
Sbjct: 987 QTQLRIDSFFRLAQQEKQDAKLIKSHRLNRAVTCILRKER----EEKAPELTKV-----T 1037
Query: 1145 NGLENGNNRSQK--APKKAEESV 1165
L++ ++QK P K E SV
Sbjct: 1038 EALDDAKGKTQKRELPYKKETSV 1060
>gi|83766314|dbj|BAE56457.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1066
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 104/150 (69%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M +ECQ+LL +FGLPYI APMEAEAQCA + LV
Sbjct: 782 EQELKQLRSQQKKDRRDADEVSQIMISECQQLLTLFGLPYITAPMEAEAQCAELVALGLV 841
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI A LLGSDYT
Sbjct: 842 DGIITDDSDIFLFGGTRVYKNMFNQGKFVECYLTSDLEKEYALHRRKLISFAHLLGSDYT 901
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F L +FR+W
Sbjct: 902 EGIPGIGPVTALEILTEF---SNLEEFRDW 928
>gi|391869945|gb|EIT79134.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 1066
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 104/150 (69%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M +ECQ+LL +FGLPYI APMEAEAQCA + LV
Sbjct: 782 EQELKQLRSQQKKDRRDADEVSQIMISECQQLLTLFGLPYITAPMEAEAQCAELVALGLV 841
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG++TDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R KLI A LLGSDYT
Sbjct: 842 DGIITDDSDIFLFGGTRVYKNMFNQGKFVECYLTSDLEKEYALHRRKLISFAHLLGSDYT 901
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F L +FR+W
Sbjct: 902 EGIPGIGPVTALEILTEF---SNLEEFRDW 928
>gi|58258651|ref|XP_566738.1| single-stranded DNA specific endodeoxyribonuclease [Cryptococcus
neoformans var. neoformans JEC21]
gi|57222875|gb|AAW40919.1| single-stranded DNA specific endodeoxyribonuclease, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 1323
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 104/151 (68%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L E + R+++ ++ M A+ Q LL+ FG+PYI APMEAEAQCA + L
Sbjct: 922 IDDEIRVLNSENRVAMRDSDEITQSMIAQIQTLLRHFGIPYITAPMEAEAQCAKLAQLGL 981
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG++TDDSDVFLFG +KNIF+D KY E + + D+E++L LTRE+LI +A LGSDY
Sbjct: 982 VDGIITDDSDVFLFGGVQCFKNIFNDAKYAECFLLADVERELMLTRERLISLAYFLGSDY 1041
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
T G+ GIG V +E++ FP E GL F+EW
Sbjct: 1042 TLGLPGIGPVMGLEILANFPGERGLYDFKEW 1072
>gi|321251586|ref|XP_003192115.1| single-stranded DNA specific endodeoxyribonuclease [Cryptococcus
gattii WM276]
gi|317458583|gb|ADV20328.1| Single-stranded DNA specific endodeoxyribonuclease, putative
[Cryptococcus gattii WM276]
Length = 1263
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 105/151 (69%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L E + R+++ +++ M A+ Q LL+ FG+PYI APMEAEAQCA + L
Sbjct: 862 IDDEIRVLNSENRVAMRDSDEITASMVAQIQTLLRHFGIPYITAPMEAEAQCAKLAQLGL 921
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG++TDDSDVFLFG +KNIF+D KY E + + D+E++L LTRE+LI +A LGSDY
Sbjct: 922 VDGIITDDSDVFLFGGVQCFKNIFNDAKYAECFLLADVERELMLTRERLISLAYFLGSDY 981
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
T G+ GIG V +E++ FP E GL F+EW
Sbjct: 982 TLGLPGIGPVMGLEILANFPGERGLYDFKEW 1012
>gi|332242072|ref|XP_003270208.1| PREDICTED: DNA repair protein complementing XP-G cells isoform 1
[Nomascus leucogenys]
Length = 1189
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 154/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 734 EELETLESNLLAQQNSLKAQKQQQERTAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 793
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 794 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 853
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 854 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 913
Query: 1023 --TILGKFDVQTG-------ASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
L + G + K D + K + + EF + ++ K
Sbjct: 914 VKKKLRTLQLTPGFPNPAIAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 973
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 974 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEREDAKRIKSQRLNRAV 1019
>gi|297274787|ref|XP_001096257.2| PREDICTED: DNA repair protein complementing XP-G cells isoform 1
[Macaca mulatta]
Length = 1182
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L E+++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 734 EELETLESNLLAQQNSLKAEKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 793
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 794 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 853
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 854 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 913
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 914 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLEKIREFCQRYFGWNRTKT 973
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 974 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1019
>gi|380810474|gb|AFE77112.1| DNA repair protein complementing XP-G cells [Macaca mulatta]
gi|383416485|gb|AFH31456.1| DNA repair protein complementing XP-G cells [Macaca mulatta]
Length = 1182
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L E+++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 734 EELETLESNLLAQQNSLKAEKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 793
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 794 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 853
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 854 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 913
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 914 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLEKIREFCQRYFGWNRTKT 973
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 974 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1019
>gi|406697519|gb|EKD00778.1| single-stranded DNA specific endodeoxyribonuclease [Trichosporon
asahii var. asahii CBS 8904]
Length = 1166
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 104/151 (68%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L + K R+++ ++ M + Q LL+ FG+PYI APMEAEAQCA + L
Sbjct: 776 IDEEIRVLNTQTKAAMRDSDEITQAMVVQIQTLLRHFGIPYITAPMEAEAQCAKLAELGL 835
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG++TDDSDVFLFG +KNIF+D K+ E D+E++L LTRE+LI ++ LLGSDY
Sbjct: 836 VDGIITDDSDVFLFGGTQCFKNIFNDNKFAECILATDVERELSLTRERLISLSYLLGSDY 895
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
T G+ GIG V A+E++ FP DGL KF+EW
Sbjct: 896 TIGLPGIGPVLALELLANFPGPDGLLKFKEW 926
>gi|1389577|dbj|BAA03813.1| ERCC5 [Mus musculus]
Length = 1170
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 151/272 (55%), Gaps = 30/272 (11%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ +R A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L++ G +TD
Sbjct: 749 LKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLSDQTSGTITD 808
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 809 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYSQLGLDRNKLINLAYLLGSDYTEGIPTV 868
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWI----------ESPDPTILGK----------FDV 1030
G V A+E++N FP D L KF EW E+P T + K F
Sbjct: 869 GCVTAMEILNEFPGRGLDPLLKFSEWWHEAQNNKKVAENPYDTKVKKKLRKLQLTPGFPN 928
Query: 1031 QTGASSRKRRSSDGDK-DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
A + R D + + K V + EF + ++ K +K ++ H
Sbjct: 929 PAVADAYLRPVVDDSRGSFLWGKPDVDKIREFXQRYFGWNRMKTDESLYPVLKH--LNAH 986
Query: 1090 -TQLRLEAFYTFNERFAK----IRSKRIKKAV 1116
TQLR+++F+ ++ + I+S R+ +AV
Sbjct: 987 QTQLRIDSFFRLAQQEKQDAKLIKSHRLSRAV 1018
>gi|74215723|dbj|BAE23409.1| unnamed protein product [Mus musculus]
Length = 1166
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 170/323 (52%), Gaps = 41/323 (12%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ +R A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 749 LKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLTDQTSGTITD 808
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 809 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYSQLGLDRNKLINLAYLLGSDYTEGIPTV 868
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWI----------ESPDPTILGK----------FDV 1030
G V A+E++N FP D L KF EW E+P T + K F
Sbjct: 869 GCVTAMEILNEFPGRGLDPLLKFSEWWHEAQNNKKVAENPYDTKVKKKLRKLQLTPGFPN 928
Query: 1031 QTGASSRKRRSSDGDK-DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
A + R D + + K V + EF + ++ K +K ++ H
Sbjct: 929 PAVADAYLRPVVDDSRGSFLWGKPDVDKIREFCQRYFGWNRMKTDESLYPVLKH--LNAH 986
Query: 1090 -TQLRLEAFYTFNERFAK----IRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRKN 1144
TQLR+++F+ ++ + I+S R+ +AV I + ++ E++K
Sbjct: 987 QTQLRIDSFFRLAQQEKQDAKLIKSHRLNRAVTCILRKER----EEKAPELTKV-----T 1037
Query: 1145 NGLENGNNRSQK--APKKAEESV 1165
L++ ++QK P K E SV
Sbjct: 1038 EALDDAKGKTQKRELPYKKETSV 1060
>gi|345324376|ref|XP_001513433.2| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Ornithorhynchus anatinus]
Length = 1520
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 248/522 (47%), Gaps = 94/522 (18%)
Query: 741 GRCLSASAKGDEHL--THEDKKNNCEAETSVLPGDKKNEIEVEMKHD---FTAEPSCRTV 795
G LS ++K E+L T +D KN+ +ET +P + EI+ E F A S
Sbjct: 940 GTVLSCTSKESENLLKTVQDVKNDFSSET-WMPDAQLVEIDSEESASDGSFVAVDS---- 994
Query: 796 GTSDTSIPL-------VKTSGNASIYD----TDIEQKSAEERTPDTYLKDSKQNTGI-FA 843
TSD +P V T + + D+E+K + P+T L+D+ + +
Sbjct: 995 ETSDDELPTEGCDVSEVSTDHDEKLIALEEAADVERKGVGD--PETVLRDNAEEVELAIR 1052
Query: 844 TKAIENVHAEATEK---ILEEEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQ 896
+ +E EA ++ I EE++ L+ + + L ++++ ER A +V+ +MF E Q
Sbjct: 1053 EREVEKDAEEAADEWQDINLEELETLEKDLLVEQNTLQAQKQQQERIASTVTGQMFLESQ 1112
Query: 897 ELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVE 956
ELL++FG+P+I APMEAEAQCA ++L + G +TDDSDV+LFGAR VYKN F+ K++E
Sbjct: 1113 ELLRLFGIPFIEAPMEAEAQCAILDLTDQTSGTITDDSDVWLFGARHVYKNFFNKNKFIE 1172
Query: 957 TYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFR 1014
Y D LGL R KLI +A LLGSDYTEGI +G V A+E++N FP + L F
Sbjct: 1173 YYQYGDFYNQLGLDRNKLINLAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLHFS 1232
Query: 1015 EWIES--------PDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESIS 1066
EW P+P D + R+ + + G + A+ + V DES
Sbjct: 1233 EWWNEAQKNKKIRPNP-----HDTKVKKKLRQLQLAPGFPNPAVAEAYLRPV--VDESRG 1285
Query: 1067 QFDEDKQSAE-YSQNMKKIF-----------------MDKH-TQLRLEAFYTFNERFAK- 1106
F K AE Q ++ F ++ H TQLR+++F+ + +
Sbjct: 1286 AFLWGKPDAEKIRQFCQRYFGWNKTKTDESLLPVLKQLNIHQTQLRIDSFFRVEQHEKQD 1345
Query: 1107 ---IRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRKNNGLENGNNRSQKAPKKAEE 1163
I+SKR+ +AV + RK+R+ + E Q+A E
Sbjct: 1346 AKGIKSKRLNRAVTCML------------------RKEREGDATE-----IQEATAALEN 1382
Query: 1164 SVSGAQNNMEKSSQSQSRERKVLEKFVLAEMENPERLTPAGG 1205
+ EK+S+ + ERK + + +PE GG
Sbjct: 1383 EFELLEKTKEKTSRKATEERKTPQDLKRKRLSSPEEENRCGG 1424
>gi|338715323|ref|XP_001494708.3| PREDICTED: DNA repair protein complementing XP-G cells [Equus
caballus]
Length = 1190
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 159/292 (54%), Gaps = 42/292 (14%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 739 EELETLESNLLAQQTSLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQ 798
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 799 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 858
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPTILG 1026
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 859 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWNEAQKNKKIRPNP---- 914
Query: 1027 KFDVQTGASSRKRRSSDGDKD------------------VNYAKNSVGGVSEFDESISQF 1068
+D + RK + + G + + K + + EF + +
Sbjct: 915 -YDTKVKKKLRKLQLTPGFPNPAVADAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGW 973
Query: 1069 DEDKQSAEYSQNMKKIFMDKHTQLRLEAFYTFNERFAK----IRSKRIKKAV 1116
+ K +K++ + + TQLR+++F+ ++ + I+S+R+ +AV
Sbjct: 974 NRTKTDETLFPVLKQLNV-QQTQLRIDSFFRVAQQEKQDAKGIKSQRLNRAV 1024
>gi|170172544|ref|NP_035859.2| DNA repair protein complementing XP-G cells homolog [Mus musculus]
Length = 1170
Score = 174 bits (442), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 170/323 (52%), Gaps = 41/323 (12%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ +R A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 749 LKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLTDQTSGTITD 808
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 809 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYSQLGLDRNKLINLAYLLGSDYTEGIPTV 868
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWI----------ESPDPTILGK----------FDV 1030
G V A+E++N FP D L KF EW E+P T + K F
Sbjct: 869 GCVTAMEILNEFPGRGLDPLLKFSEWWHEAQNNKKVAENPYDTKVKKKLRKLQLTPGFPN 928
Query: 1031 QTGASSRKRRSSDGDK-DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
A + R D + + K V + EF + ++ K +K ++ H
Sbjct: 929 PAVADAYLRPVVDDSRGSFLWGKPDVDKIREFCQRYFGWNRMKTDESLYPVLKH--LNAH 986
Query: 1090 -TQLRLEAFYTFNERFAK----IRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRKN 1144
TQLR+++F+ ++ + I+S R+ +AV I + ++ E++K
Sbjct: 987 QTQLRIDSFFRLAQQEKQDAKLIKSHRLNRAVTCILRKER----EEKAPELTKV-----T 1037
Query: 1145 NGLENGNNRSQK--APKKAEESV 1165
L++ ++QK P K E SV
Sbjct: 1038 EALDDAKGKTQKRELPYKKETSV 1060
>gi|170099279|ref|XP_001880858.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644383|gb|EDR08633.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1137
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 109/151 (72%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L ++K R++E ++ +M + +L++FG+PYI APMEAEAQCA + L
Sbjct: 717 IDVEIETLHQQRKAAMRDSEDITQQMITQIMTMLRLFGIPYITAPMEAEAQCAELVTLKL 776
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG++TDDSDVFLFG + VYKN+F+ K VE + + D+ +DLGL ++ LIR+A LLGSDY
Sbjct: 777 VDGIITDDSDVFLFGGQRVYKNMFNQSKTVEGFALADLTRDLGLDQDALIRLAYLLGSDY 836
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EG+ G+G V A+E++ FP +DGL KF++W
Sbjct: 837 VEGLPGVGPVVAMELLQEFPGKDGLYKFKDW 867
>gi|327298531|ref|XP_003233959.1| DNA excision repair protein [Trichophyton rubrum CBS 118892]
gi|326464137|gb|EGD89590.1| DNA excision repair protein [Trichophyton rubrum CBS 118892]
Length = 1121
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M ECQ+LL++FGLPYI APMEAEAQCA + LV
Sbjct: 768 EQELKQLRSQQKKDRRDADEVSQIMVTECQQLLRLFGLPYITAPMEAEAQCAELVTLGLV 827
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD FLFG +YKN+F+ KYVE Y D+EK+ L R+KLI + LLGSDYT
Sbjct: 828 DGIVTDDSDTFLFGGTRIYKNMFNQSKYVECYLSSDLEKEYTLDRKKLISFSHLLGSDYT 887
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F + L +FR+W
Sbjct: 888 EGIPGIGPVTALEILTEFSD---LEEFRDW 914
>gi|302665120|ref|XP_003024173.1| hypothetical protein TRV_01672 [Trichophyton verrucosum HKI 0517]
gi|291188218|gb|EFE43562.1| hypothetical protein TRV_01672 [Trichophyton verrucosum HKI 0517]
Length = 1120
Score = 174 bits (441), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M ECQ+LL++FGLPYI APMEAEAQCA + LV
Sbjct: 767 EQELKQLRSQQKKDRRDADEVSQIMVTECQQLLRLFGLPYITAPMEAEAQCAELVALGLV 826
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD FLFG +YKN+F+ KYVE Y D+EK+ L R+KLI + LLGSDYT
Sbjct: 827 DGIVTDDSDTFLFGGTRIYKNMFNQSKYVECYLSSDLEKEYTLDRKKLISFSHLLGSDYT 886
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F + L +FR+W
Sbjct: 887 EGIPGIGPVTALEILTEFSD---LEEFRDW 913
>gi|431913228|gb|ELK14910.1| DNA repair protein complementing XP-G cell [Pteropus alecto]
Length = 1074
Score = 174 bits (441), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/292 (35%), Positives = 156/292 (53%), Gaps = 42/292 (14%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 626 EELETLESNLLVQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQ 685
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F K+VE Y D LGL R KLI
Sbjct: 686 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFSKNKFVEYYQYVDFHNQLGLDRNKLIN 745
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPTILG 1026
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 746 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNKKIRPNP---- 801
Query: 1027 KFDVQTGASSRKRRSSDGDKD------------------VNYAKNSVGGVSEFDESISQF 1068
+D + RK S G + + K + +S F + +
Sbjct: 802 -YDTKVKKKLRKLHLSPGFPNPAIADAYLKPVVDDSKGSFLWGKPDLDKISIFCQRYFGW 860
Query: 1069 DEDKQSAEYSQNMKKIFMDKHTQLRLEAFYTFNERFAK----IRSKRIKKAV 1116
+ K +K++ + TQLR+++F+ ++ + I+S+R+ +AV
Sbjct: 861 NRTKTDESLFPVLKQL-NTQQTQLRIDSFFRLAQQEKQDAKGIKSQRLNRAV 911
>gi|315041705|ref|XP_003170229.1| DNA-repair protein rad13 [Arthroderma gypseum CBS 118893]
gi|311345263|gb|EFR04466.1| DNA-repair protein rad13 [Arthroderma gypseum CBS 118893]
Length = 1126
Score = 174 bits (441), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M ECQ+LL++FGLPYI APMEAEAQCA + LV
Sbjct: 768 EQELKQLRSQQKKDRRDADEVSQIMVTECQQLLRLFGLPYITAPMEAEAQCAELVALGLV 827
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD FLFG +YKN+F+ KYVE Y D+EK+ L R+KLI + LLGSDYT
Sbjct: 828 DGIVTDDSDTFLFGGTRIYKNMFNQSKYVECYLSSDLEKEYTLDRKKLISFSHLLGSDYT 887
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F + L +FR+W
Sbjct: 888 EGIPGIGPVTALEILTEFSD---LEEFRDW 914
>gi|74211217|dbj|BAE37682.1| unnamed protein product [Mus musculus]
Length = 1043
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 151/275 (54%), Gaps = 30/275 (10%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ +R A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 749 LKAQKQQQDRIAASVTGQMFQESQELLRLFGVPYIQAPMEAEAQCAMLDLTDQTSGTITD 808
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 809 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYSQLGLDRNKLINLAYLLGSDYTEGIPTV 868
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWI----------ESPDPTILGK----------FDV 1030
G V A+E++N FP D L KF EW E+P T + K F
Sbjct: 869 GCVTAMEILNEFPGRGLDPLLKFSEWWHEAQNNKKVAENPYDTKVKKKLRKLQLTPGFPN 928
Query: 1031 QTGASSRKRRSSDGDK-DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
A + R D + + K V + EF + ++ K +K ++ H
Sbjct: 929 PAVADAYLRPVVDDSRGSFLWGKPDVDKIREFCQRYFGWNRMKTDESLYPVLKH--LNAH 986
Query: 1090 -TQLRLEAFYTFNERFAK----IRSKRIKKAVKGI 1119
TQLR+++F+ ++ + I+S R+ +AV I
Sbjct: 987 QTQLRIDSFFRLAQQEKQDAKLIKSHRLNRAVTCI 1021
>gi|408360334|sp|P35689.4|ERCC5_MOUSE RecName: Full=DNA repair protein complementing XP-G cells homolog;
AltName: Full=DNA excision repair protein ERCC-5;
AltName: Full=Xeroderma pigmentosum group G-complementing
protein homolog
Length = 1170
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 170/323 (52%), Gaps = 41/323 (12%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ +R A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 749 LKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLTDQTSGTITD 808
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 809 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYSQLGLDRNKLINLAYLLGSDYTEGIPTV 868
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWI----------ESPDPTILGK----------FDV 1030
G V A+E++N FP D L KF EW E+P T + K F
Sbjct: 869 GCVTAMEILNEFPGRGLDPLLKFSEWWHEAQNNKKVAENPYDTKVKKKLRKLQLTPGFPN 928
Query: 1031 QTGASSRKRRSSDGDK-DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
A + R D + + K V +S F + ++ K +K ++ H
Sbjct: 929 PAVADAYLRPVVDDSRGSFLWGKPDVDKISTFCQRYFGWNRMKTDESLYPVLKH--LNAH 986
Query: 1090 -TQLRLEAFYTFNERFAK----IRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRKN 1144
TQLR+++F+ ++ + I+S R+ +AV I + ++ E++K
Sbjct: 987 QTQLRIDSFFRLAQQEKQDAKLIKSHRLNRAVTCILRKER----EEKAPELTKV-----T 1037
Query: 1145 NGLENGNNRSQK--APKKAEESV 1165
L++ ++QK P K E SV
Sbjct: 1038 EALDDAKGKTQKRELPYKKETSV 1060
>gi|397524400|ref|XP_003832181.1| PREDICTED: DNA repair protein complementing XP-G cells [Pan paniscus]
Length = 1754
Score = 174 bits (440), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 1302 EELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 1361
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VY+N F+ K+VE Y D LGL R KLI
Sbjct: 1362 CAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 1421
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIE--------SPDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 1422 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 1481
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 1482 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 1541
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 1542 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1587
>gi|403347306|gb|EJY73073.1| hypothetical protein OXYTRI_05797 [Oxytricha trifallax]
Length = 1055
Score = 174 bits (440), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 111/150 (74%)
Query: 869 EYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDG 928
E +YL E +K ++ S E E + LL++ G+P++ AP EAE+QCA++E+ LVDG
Sbjct: 732 ENIYLISELEKTAKHFTYFSQENTQELKTLLRLCGIPFVQAPFEAESQCAFLEINGLVDG 791
Query: 929 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEG 988
VVT+DSDV LFGAR VY+NIFD K+ E Y M+ IE+++GL R+ LI+MAL +GSDYT G
Sbjct: 792 VVTEDSDVLLFGARKVYRNIFDRNKFAEKYDMKIIEREMGLDRDDLIKMALFMGSDYTMG 851
Query: 989 ISGIGIVNAIEVVNAFPEEDGLSKFREWIE 1018
+ GI VNAIE++N+F ++GL KF++W++
Sbjct: 852 VRGIAAVNAIEIINSFQGDEGLEKFKQWVD 881
>gi|229577369|ref|NP_001153363.1| mutagen-sensitive 201 [Nasonia vitripennis]
Length = 1167
Score = 174 bits (440), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 113/177 (63%), Gaps = 5/177 (2%)
Query: 856 EKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEA 915
EK LE L+ E + KLER A ++ +M E QELL++FG+PYI+APMEAEA
Sbjct: 739 EKELESMKNQLESEQQKITSSLGKLERQAIDITDQMRLEAQELLRLFGVPYIVAPMEAEA 798
Query: 916 QCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLI 975
QCAY+E L DG +TDDSD++LFG VYKN FD+ K V + QDIE L+R ++I
Sbjct: 799 QCAYLEQIKLTDGTITDDSDIWLFGGHCVYKNFFDNNKRVLQFLSQDIEHHFKLSRREMI 858
Query: 976 RMALLLGSDYTEGISGIGIVNAIEVVNAFPEED-----GLSKFREWIESPDPTILGK 1027
++ALL+GSDYT G++G+G V A+E++ AFP E GL F W + T GK
Sbjct: 859 QLALLVGSDYTNGLAGVGPVTALEILAAFPTEGEDILRGLRNFCSWFRAGKLTAPGK 915
>gi|307206657|gb|EFN84629.1| DNA-repair protein complementing XP-G cells [Harpegnathos saltator]
Length = 1139
Score = 173 bits (439), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 77/145 (53%), Positives = 105/145 (72%), Gaps = 5/145 (3%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
KLER A ++S ++ E QELL++FG+PY++APMEAEAQCAY+E L DG +TDDSD++L
Sbjct: 752 KLERQATNISEQIRIEAQELLRLFGIPYVVAPMEAEAQCAYLEQIKLTDGTITDDSDIWL 811
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
FG R VYKN F++ K V+ + DI+ LTR +LI++ALL+GSDYT G++GIG V A+
Sbjct: 812 FGGRCVYKNFFNNSKRVQQFRACDIQHHFKLTRNQLIQLALLVGSDYTTGVAGIGPVTAL 871
Query: 999 EVVNAFPEE-----DGLSKFREWIE 1018
E++ AFP E GL F WI+
Sbjct: 872 EILAAFPAEGDNVLHGLHNFCTWIK 896
>gi|409048860|gb|EKM58338.1| hypothetical protein PHACADRAFT_193460 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1225
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 859 LEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQE----LLQMFGLPYIIAPMEAE 914
L+E + +D E L +++K R++E ++ +M ++ +L++FG+PYI APMEAE
Sbjct: 805 LDEVRKEIDDEIRALKEQRKIAMRDSEDITHQMISQVMHGAEMMLRLFGIPYITAPMEAE 864
Query: 915 AQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKL 974
AQCA + LVDG++TDDSDVFLFG V KN+F+ K VE + + D+ ++LGL REKL
Sbjct: 865 AQCAELLALGLVDGIITDDSDVFLFGGARVLKNMFNQSKTVECFLLSDLGRELGLEREKL 924
Query: 975 IRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
IR+A LLGSDYTEG+ G+G V A+E++ F DGL KFREW
Sbjct: 925 IRLAYLLGSDYTEGLPGVGPVVAMELLTEFSGSDGLHKFREW 966
>gi|297694381|ref|XP_002824460.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein complementing XP-G
cells [Pongo abelii]
Length = 1899
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 155/287 (54%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 1447 EELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 1506
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 1507 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 1566
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIE--SPDPTIL-GKFDVQ 1031
+A LLGSDYTEGI +G V A+E++N FP + L KF EW +P I +D +
Sbjct: 1567 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPYDTK 1626
Query: 1032 TGASSRKRRSSDGDKD------------------VNYAKNSVGGVSEFDESISQFDEDKQ 1073
R + + G + + K + + EF + ++ K
Sbjct: 1627 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 1686
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E I+S+R+ +AV
Sbjct: 1687 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKHIKSQRLNRAV 1732
>gi|194378226|dbj|BAG57863.1| unnamed protein product [Homo sapiens]
Length = 1018
Score = 173 bits (439), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 566 EELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 625
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VY+N F+ K+VE Y D LGL R KLI
Sbjct: 626 CAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 685
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 686 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 745
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 746 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 805
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 806 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 851
>gi|449298336|gb|EMC94351.1| hypothetical protein BAUCODRAFT_73871 [Baudoinia compniacensis UAMH
10762]
Length = 1348
Score = 173 bits (439), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 119/186 (63%), Gaps = 9/186 (4%)
Query: 854 ATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEA 913
A E I E E E L ++QKK R+A+ V+ M ECQ+LL++FGLPY+ APMEA
Sbjct: 947 AAENIAEYE-----KELKQLRNQQKKDRRDADEVTHIMVTECQQLLRLFGLPYVTAPMEA 1001
Query: 914 EAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREK 973
EAQCA + LVDG+VTDDSD FLFG +YKN+F+ K+VE Y D+EK+ LTR+K
Sbjct: 1002 EAQCAELVRLGLVDGIVTDDSDCFLFGGTRIYKNMFNQAKFVECYLSSDLEKEFDLTRQK 1061
Query: 974 LIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTG 1033
LI +A LLGSDYTEG+ +G V A+E++ F LS F++W I+ K DV
Sbjct: 1062 LIAVAHLLGSDYTEGLPSVGPVTALEILGEFV---SLSDFKDWWNGVQMNIIPK-DVDKD 1117
Query: 1034 ASSRKR 1039
+ RK+
Sbjct: 1118 NAFRKK 1123
>gi|324715041|ref|NP_001191354.1| BIVM-ERCC5 protein [Homo sapiens]
Length = 1640
Score = 173 bits (439), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 1188 EELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 1247
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VY+N F+ K+VE Y D LGL R KLI
Sbjct: 1248 CAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 1307
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 1308 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 1367
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 1368 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 1427
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 1428 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1473
>gi|212540874|ref|XP_002150592.1| DNA excision repair protein Rad2 [Talaromyces marneffei ATCC 18224]
gi|210067891|gb|EEA21983.1| DNA excision repair protein Rad2 [Talaromyces marneffei ATCC 18224]
Length = 1127
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 107/151 (70%), Gaps = 3/151 (1%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+ E L ++QKK R+A+ +S M +ECQ+LL++FGLPYI APMEAEAQCA + L
Sbjct: 801 FEQELKQLRNQQKKDRRDADEISQIMVSECQQLLRLFGLPYITAPMEAEAQCAELVSLGL 860
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG+VTDDSD FLFG +YKN+F+ K+VE + D+EK+ L R KLI+ A LLGSDY
Sbjct: 861 VDGIVTDDSDTFLFGGTRIYKNMFNQSKFVECFLSNDLEKEYALDRVKLIQFAHLLGSDY 920
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
TEGI G+G V A+E++ F + L +FR+W
Sbjct: 921 TEGIPGVGPVTALEIITEF---NNLEEFRDW 948
>gi|169596320|ref|XP_001791584.1| hypothetical protein SNOG_00917 [Phaeosphaeria nodorum SN15]
gi|160701280|gb|EAT92412.2| hypothetical protein SNOG_00917 [Phaeosphaeria nodorum SN15]
Length = 1279
Score = 173 bits (438), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 130/229 (56%), Gaps = 22/229 (9%)
Query: 796 GTSDTSIPLVKTSGNASIYDTDIEQKSAEERTP--DTYLKDSKQNTGIFATKAIENVHAE 853
G D IP+V G I + +A P D+ ++ +FA+ A E AE
Sbjct: 833 GPDDLDIPIVPYGG--------IAEDTAHLDIPGNDSDQYSDPEDAELFASLAAE---AE 881
Query: 854 ATEKILEEEMQI------LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYI 907
E+ +E D E L +QKK R+A+ V+ M ECQ LL +FGLPYI
Sbjct: 882 EHERFAKEVTNNAATKVNFDEELKSLRAQQKKDRRDADEVTQSMITECQHLLTLFGLPYI 941
Query: 908 IAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDL 967
APMEAEAQCA + LVDG+VTDDSD FLFG VYKN+F+ K+VE Y D+ +
Sbjct: 942 TAPMEAEAQCAELVHLGLVDGIVTDDSDTFLFGGTRVYKNMFNAAKFVECYLANDLVSEF 1001
Query: 968 GLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
LTR+K+I +A LLGSDYT GI GIG V A+E++ FP+ L F++W
Sbjct: 1002 SLTRDKMIAIAQLLGSDYTTGIPGIGPVTALELLAEFPD---LQDFKDW 1047
>gi|291393208|ref|XP_002713065.1| PREDICTED: XPG-complementing protein isoform 2 [Oryctolagus
cuniculus]
Length = 1203
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+++ + L ++++ ER A +V+ +MF E QELL++FG+PY+ APMEAEAQ
Sbjct: 745 EELETLENDLLAQQNSLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYVEAPMEAEAQ 804
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 805 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 864
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIE 1018
+A LLGSDYTEGI +G V A+E++N FP + L KF EW +
Sbjct: 865 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLVKFSEWWQ 908
>gi|326663749|ref|XP_003197653.1| PREDICTED: DNA repair protein complementing XP-G cells homolog [Danio
rerio]
Length = 1022
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 157/278 (56%), Gaps = 28/278 (10%)
Query: 856 EKILEEEMQILDHEYMYLGDEQKKLE-------RNAESVSSEMFAECQELLQMFGLPYII 908
E I EE+Q+LD E L DEQ+ L R++ +V+ +M E QELL++FG+P+I+
Sbjct: 619 EHIDTEELQLLDRE---LQDEQQTLREQHQQQQRSSSTVTGQMCQESQELLRLFGVPFIV 675
Query: 909 APMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLG 968
APMEAEAQCA ++ + G +TDDSD++LFG R VY+N F+ KYVE Y + D++ LG
Sbjct: 676 APMEAEAQCAALDRLDQTHGTITDDSDIWLFGGRHVYRNFFNQNKYVEHYQIVDMQNQLG 735
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIESPDPTILG 1026
L R KLI +A LLGSDYTEGI G+G V +E++N FP + L + EW
Sbjct: 736 LDRSKLINLAYLLGSDYTEGIPGVGYVTGMEILNEFPGAGLEPLVQLSEWWTEAQEN--K 793
Query: 1027 KFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFM 1086
K V + K++ + + +V ++ Q D+ A +S + +
Sbjct: 794 KLSVNPKDTKVKKKLRNLQIHPGFPNPAVA------QAYLQPSVDQSDASFSWGRPHLDL 847
Query: 1087 DKH-------TQLRLEAFYTFNER-FAKIRSKRIKKAV 1116
K TQLR+++F+ ++ +IRS+R+++AV
Sbjct: 848 IKEYPSPKPATQLRIDSFFRLEQQDRQQIRSERLRRAV 885
>gi|296412156|ref|XP_002835792.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629585|emb|CAZ79949.1| unnamed protein product [Tuber melanosporum]
Length = 914
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 111/165 (67%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
AE K ++ + + E L +Q K R+A+ V+ M ECQ+LL +FG+PYI APM
Sbjct: 516 AELNNKPQQQTREGYERELHTLRVQQAKDRRDADEVTQAMVQECQQLLTLFGIPYITAPM 575
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTR 971
EAEAQCA + LVDG+VTDDSD FLFG VYKN+F+ K+VE Y D+EK+ L R
Sbjct: 576 EAEAQCAELVRLGLVDGIVTDDSDTFLFGGTRVYKNMFNQAKFVECYLAGDLEKEYALDR 635
Query: 972 EKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
LIR+A LLGSDYTEG+ +G V A+E++ F ++GL++F+EW
Sbjct: 636 TGLIRIAHLLGSDYTEGVPTVGPVTAMELLAEFASDNGLTEFKEW 680
>gi|398403715|ref|XP_003853324.1| hypothetical protein MYCGRDRAFT_109224 [Zymoseptoria tritici IPO323]
gi|339473206|gb|EGP88300.1| hypothetical protein MYCGRDRAFT_109224 [Zymoseptoria tritici IPO323]
Length = 1324
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 105/153 (68%), Gaps = 3/153 (1%)
Query: 864 QILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELA 923
Q + E L ++QKK R+A+ V+ M ECQ LL++FGLPYI APMEAEAQCA +
Sbjct: 947 QDYERELKQLRNQQKKDRRDADEVTHIMITECQALLRLFGLPYITAPMEAEAQCAELVKL 1006
Query: 924 NLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGS 983
LVDG+VTDDSD FLFG +YKN+F+ K+VE Y D+EK+ LTR KLI +A LLGS
Sbjct: 1007 GLVDGIVTDDSDCFLFGGTRIYKNMFNQAKFVECYLTSDLEKEFDLTRGKLISVAHLLGS 1066
Query: 984 DYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
DYTEG+ G+G V A+E+++ F L F+ W
Sbjct: 1067 DYTEGLPGVGPVTALEIISEF---GSLDNFKTW 1096
>gi|291393206|ref|XP_002713064.1| PREDICTED: XPG-complementing protein isoform 1 [Oryctolagus
cuniculus]
Length = 1188
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 113/164 (68%), Gaps = 6/164 (3%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+++ + L ++++ ER A +V+ +MF E QELL++FG+PY+ APMEAEAQ
Sbjct: 730 EELETLENDLLAQQNSLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYVEAPMEAEAQ 789
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 790 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 849
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIE 1018
+A LLGSDYTEGI +G V A+E++N FP + L KF EW +
Sbjct: 850 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLVKFSEWWQ 893
>gi|51988900|ref|NP_000114.2| DNA repair protein complementing XP-G cells [Homo sapiens]
gi|21619256|gb|AAH31522.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Homo sapiens]
gi|24079971|gb|AAN46091.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Homo sapiens]
gi|61364768|gb|AAX42600.1| excision repair cross-complementing rodent repair deficiency
complementation group 5 [synthetic construct]
gi|123981830|gb|ABM82744.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 (xeroderma pigmentosum,
complementation group G (Cockayne syndrome)) [synthetic
construct]
gi|123996661|gb|ABM85932.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 (xeroderma pigmentosum,
complementation group G (Cockayne syndrome)) [synthetic
construct]
Length = 1186
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 734 EELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 793
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VY+N F+ K+VE Y D LGL R KLI
Sbjct: 794 CAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 853
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 854 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 913
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 914 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 973
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 974 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1019
>gi|298111|emb|CAA49598.1| XP-G factor [Homo sapiens]
gi|119629476|gb|EAX09071.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 (xeroderma pigmentosum,
complementation group G (Cockayne syndrome)), isoform
CRA_a [Homo sapiens]
Length = 1186
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 734 EELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 793
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VY+N F+ K+VE Y D LGL R KLI
Sbjct: 794 CAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 853
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 854 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 913
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 914 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 973
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 974 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1019
>gi|401888761|gb|EJT52712.1| hypothetical protein A1Q1_02762 [Trichosporon asahii var. asahii CBS
2479]
Length = 1245
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 76/151 (50%), Positives = 104/151 (68%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L + K R+++ ++ M + Q LL+ FG+PYI APMEAEAQCA + L
Sbjct: 855 IDEEIRVLNTQTKAAMRDSDEITQAMVVQIQTLLRHFGIPYITAPMEAEAQCAKLAELGL 914
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG++TDDSDVFLFG +KNIF+D K+ E D+E++L LTRE+LI ++ LLGSDY
Sbjct: 915 VDGIITDDSDVFLFGGTQCFKNIFNDNKFAECILATDVERELSLTRERLISLSYLLGSDY 974
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
T G+ GIG V A+E++ FP DGL +F+EW
Sbjct: 975 TIGLPGIGPVLALELLANFPGPDGLLRFKEW 1005
>gi|255943339|ref|XP_002562438.1| Pc18g06110 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587171|emb|CAP94835.1| Pc18g06110 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1083
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/150 (54%), Positives = 104/150 (69%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +Q+ R+A+ V++ M ECQ+LL +FGLPYI APMEAEAQCA + LV
Sbjct: 741 EQELKQLRSQQRNERRDADEVTTIMINECQQLLTLFGLPYITAPMEAEAQCAKLVSLGLV 800
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R+KLI A LLGSDYT
Sbjct: 801 DGIVTDDSDIFLFGGTRVYKNMFNQSKFVECYLTSDLEKEYALHRQKLISFAHLLGSDYT 860
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F L +FR+W
Sbjct: 861 EGIPGIGPVTALEILTEF---SSLEEFRDW 887
>gi|60811379|gb|AAX36171.1| excision repair cross-complementing rodent repair deficiency
complementation group 5 [synthetic construct]
Length = 1187
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 734 EELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 793
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VY+N F+ K+VE Y D LGL R KLI
Sbjct: 794 CAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 853
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 854 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 913
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 914 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 973
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 974 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1019
>gi|33187721|gb|AAP97715.1|AF462447_1 excision repair protein ERCC5 [Homo sapiens]
gi|306742|gb|AAC37533.1| excision repair protein [Homo sapiens]
Length = 1186
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 734 EELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 793
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VY+N F+ K+VE Y D LGL R KLI
Sbjct: 794 CAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 853
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 854 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 913
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 914 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 973
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 974 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1019
>gi|62088204|dbj|BAD92549.1| DNA-repair protein complementing XP-G cells variant [Homo sapiens]
Length = 1611
Score = 173 bits (438), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 1159 EELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 1218
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VY+N F+ K+VE Y D LGL R KLI
Sbjct: 1219 CAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 1278
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 1279 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 1338
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 1339 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 1398
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 1399 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1444
>gi|205371791|sp|P28715.3|ERCC5_HUMAN RecName: Full=DNA repair protein complementing XP-G cells; AltName:
Full=DNA excision repair protein ERCC-5; AltName:
Full=Xeroderma pigmentosum group G-complementing protein
gi|9587154|gb|AAF89179.1| xeroderma pigmentosum complementation group G protein splice variant
[Homo sapiens]
Length = 1186
Score = 173 bits (438), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 734 EELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 793
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VY+N F+ K+VE Y D LGL R KLI
Sbjct: 794 CAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 853
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 854 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 913
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 914 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 973
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 974 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1019
>gi|426375915|ref|XP_004054761.1| PREDICTED: DNA repair protein complementing XP-G cells [Gorilla
gorilla gorilla]
Length = 1186
Score = 173 bits (438), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 734 EELETLESNLLAQQNSLKAQKQQQERVAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 793
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VY+N F+ K+VE Y D LGL R KLI
Sbjct: 794 CAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 853
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 854 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 913
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 914 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 973
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 974 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1019
>gi|294459945|ref|NP_001170894.1| DNA repair protein complementing XP-G cells [Taeniopygia guttata]
Length = 1176
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 149/275 (54%), Gaps = 25/275 (9%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
L E L ++++ ER A SV+ +MF E QELL++FG+PYI AP EAEAQCA ++L +
Sbjct: 749 LSAEQKTLQSQKQQQERVAASVTGQMFLESQELLRLFGIPYIEAPTEAEAQCALLDLTDQ 808
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
G +TDDSDV+LFG R VYKN F KY+E Y D + +LGL R KLI +A LLGSDY
Sbjct: 809 TSGTITDDSDVWLFGGRHVYKNFFSQNKYIEYYQYVDFQNELGLDRSKLINLAYLLGSDY 868
Query: 986 TEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP------------T 1023
TEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 869 TEGIPNVGFVTAMEILNEFPGHGLEPLLKFAEWWNEAQKNKKVMPNPHDTKVKKKLRELQ 928
Query: 1024 ILGKFDVQTGASSRKRRSSDGDK-DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMK 1082
+ F A + + D + + K V + EF + + K MK
Sbjct: 929 LYSGFPNPAVAEAYLKPVVDESRGSFTWGKPDVEQIREFCKDHFGWTRTKIDGILLPVMK 988
Query: 1083 KIFMDKHTQLRLEAFYTFNERFAK-IRSKRIKKAV 1116
++ + + TQLR+++F+ + + I+S+R+ +AV
Sbjct: 989 QLNL-QQTQLRIDSFFRLEQHEKQAIKSQRLLRAV 1022
>gi|410215558|gb|JAA04998.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Pan troglodytes]
gi|410261564|gb|JAA18748.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Pan troglodytes]
gi|410301776|gb|JAA29488.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Pan troglodytes]
gi|410335601|gb|JAA36747.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Pan troglodytes]
Length = 1186
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 734 EELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 793
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VY+N F+ K+VE Y D LGL R KLI
Sbjct: 794 CAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 853
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 854 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 913
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 914 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 973
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 974 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1019
>gi|254573770|ref|XP_002493994.1| Single-stranded DNA endonuclease, cleaves single-stranded DNA during
nucleotide excision repair [Komagataella pastoris GS115]
gi|238033793|emb|CAY71815.1| Single-stranded DNA endonuclease, cleaves single-stranded DNA during
nucleotide excision repair [Komagataella pastoris GS115]
gi|328354189|emb|CCA40586.1| DNA repair protein complementing XP-G cells [Komagataella pastoris
CBS 7435]
Length = 1043
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 114/157 (72%), Gaps = 13/157 (8%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
+ ++ KK +R+++ V+ M + Q++L FG+PYI APMEAEAQCA + LVDG++TD
Sbjct: 749 MKEQHKKDQRDSDEVTQGMIDDIQDMLTRFGIPYITAPMEAEAQCAELLKLKLVDGIITD 808
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD FLFG +YKN+F++++YVE YF+++I++DLGLTR K+I +ALL+GSDYTEGI GI
Sbjct: 809 DSDCFLFGGERIYKNMFNEKQYVECYFLEEIQRDLGLTRNKMIEIALLVGSDYTEGIKGI 868
Query: 993 GIVNAIEVVNAF-PEEDG------------LSKFREW 1016
GIV A+E+++ F P+++G L FR W
Sbjct: 869 GIVTAMEILSEFDPQKEGNSTPKNMLGSGSLINFRNW 905
>gi|332841607|ref|XP_003314253.1| PREDICTED: DNA repair protein complementing XP-G cells isoform 1 [Pan
troglodytes]
Length = 1186
Score = 172 bits (437), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/287 (35%), Positives = 153/287 (53%), Gaps = 32/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 734 EELETLESNLLAQQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 793
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VY+N F+ K+VE Y D LGL R KLI
Sbjct: 794 CAILDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 853
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 854 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 913
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + + EF + ++ K
Sbjct: 914 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKIREFCQRYFGWNRTKT 973
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 974 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1019
>gi|355701088|gb|EHH29109.1| hypothetical protein EGK_09444 [Macaca mulatta]
Length = 1194
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 110/162 (67%), Gaps = 6/162 (3%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L E+++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 737 EELETLESNLLAQQNSLKAEKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 796
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 797 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 856
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREW 1016
+A LLGSDYTEGI +G V A+E++N FP + L KF EW
Sbjct: 857 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEW 898
>gi|325192518|emb|CCA26951.1| DNA repair protein putative [Albugo laibachii Nc14]
Length = 939
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 111/165 (67%), Gaps = 9/165 (5%)
Query: 877 QKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV 936
Q + R+ E EM + ELL +FG+P+++ PMEAEAQCA +E LVDG+VTDDSD+
Sbjct: 638 QNRQLRDMEGFDDEMVEQVMELLTLFGVPFLVCPMEAEAQCATLEQLGLVDGIVTDDSDI 697
Query: 937 FLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVN 996
F FG VYKNIF +K+VE + +DIE++LG TR +I +ALLLGSDYT G+ GIGIVN
Sbjct: 698 FPFGGTKVYKNIFHHQKFVEAFDTRDIERELGFTRADMISLALLLGSDYTPGVRGIGIVN 757
Query: 997 AIEVVNAF-PEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRR 1040
A E++++F GL +F+ WIE +FDV A+ RK +
Sbjct: 758 AAEIISSFGSSSAGLKEFKAWIE--------EFDVHEEANRRKEK 794
Score = 41.6 bits (96), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 203 NVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQIQAYL------- 255
NV+P + ALPP++Q ++ ++ QL +R ++ + PE +S QI+++L
Sbjct: 190 NVNPEAVYALPPNLQKNMFEKIMRQLRQTSRNEFIPLAGDPEAYSRSQIKSFLARSRLHQ 249
Query: 256 KTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFS 295
K + R++ E Q V R+A + +R +I +
Sbjct: 250 KFMQVRQQNIETQIKNDSSNPELVSAKRLAGDGDRYYILN 289
>gi|187954383|gb|AAI41071.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Mus musculus]
Length = 1170
Score = 172 bits (437), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 198/421 (47%), Gaps = 73/421 (17%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ +R A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 749 LKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLTDQTSGTITD 808
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 809 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYSQLGLDRNKLINLAYLLGSDYTEGIPTV 868
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWI----------ESPDPTILGK----------FDV 1030
G V A+E++N FP D L KF EW E+P T + K F
Sbjct: 869 GCVTAMEILNEFPGRGLDPLLKFSEWWHEAQNNKKVAENPYDTKVKKKLRKLQLTPGFPN 928
Query: 1031 QTGASSRKRRSSDGDK-DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
A + R D + + K V + EF + ++ K +K ++ H
Sbjct: 929 PAVADAYLRPVVDDSRGSFLWGKPDVDKIREFCQRYFGWNRMKTDESLYPVLKH--LNAH 986
Query: 1090 -TQLRLEAFYTFNERFAK----IRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRKN 1144
TQLR+++F+ ++ + I+S R+ +AV + RK+R+
Sbjct: 987 QTQLRIDSFFRLAQQEKQDAKLIKSHRLSRAVTCML------------------RKERE- 1027
Query: 1145 NGLENGNNRSQKAPK--KAEESVSGAQNNMEKSSQSQSRERKVLEKFVLAEMENPERLTP 1202
+KAP+ K E++ A+ +K +E V P+R P
Sbjct: 1028 ----------EKAPELTKVTEALDDAKGKTQKRELPYKKETSV-----------PKRRRP 1066
Query: 1203 AGGGRNANNVFRGNRRGKGQRVGRGRGRRRLCAEQSETSSSDDIGSDDTQEYYSEKFEGQ 1262
+G G + + + + G G + A Q + S IG D + + G+
Sbjct: 1067 SGNGGFLGDPY-CSESPQESSCEDGEGSSVMSARQRSAAESSKIGCSDVPDLVRDSPHGR 1125
Query: 1263 Q 1263
Q
Sbjct: 1126 Q 1126
>gi|242800576|ref|XP_002483617.1| DNA excision repair protein Rad2 [Talaromyces stipitatus ATCC 10500]
gi|218716962|gb|EED16383.1| DNA excision repair protein Rad2 [Talaromyces stipitatus ATCC 10500]
Length = 1128
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 106/151 (70%), Gaps = 3/151 (1%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+ E L ++Q+K R+A+ VS M +ECQ+LL++FGLPYI APMEAEAQCA + L
Sbjct: 802 FEQELKQLRNQQRKDRRDADEVSQIMVSECQQLLRLFGLPYITAPMEAEAQCAELVSLGL 861
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
VDG+VTDDSD FLFG VYKN+F+ K+VE + D+EK+ L R KLI+ A LLGSDY
Sbjct: 862 VDGIVTDDSDTFLFGGTRVYKNMFNQSKFVECFLSSDLEKEYALDRIKLIQFAHLLGSDY 921
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
TEGI G+G V A+E++ F L +FR+W
Sbjct: 922 TEGIPGVGPVTALEIITEF---TNLEEFRDW 949
>gi|355754793|gb|EHH58694.1| hypothetical protein EGM_08605, partial [Macaca fascicularis]
Length = 1000
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 103/146 (70%), Gaps = 2/146 (1%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L E+++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 753 LKAEKQQQERIAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITD 812
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 813 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTV 872
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREW 1016
G V A+E++N FP + L KF EW
Sbjct: 873 GCVTAMEILNEFPGHGLEPLLKFSEW 898
>gi|302507858|ref|XP_003015890.1| hypothetical protein ARB_06202 [Arthroderma benhamiae CBS 112371]
gi|291179458|gb|EFE35245.1| hypothetical protein ARB_06202 [Arthroderma benhamiae CBS 112371]
Length = 1120
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/150 (54%), Positives = 105/150 (70%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +QKK R+A+ VS M ECQ+LL++FGLPYI APMEAEAQCA + LV
Sbjct: 767 EQELKQLRSQQKKDRRDADEVSQIMVTECQQLLRLFGLPYITAPMEAEAQCAELVALGLV 826
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD FLFG +YKN+F+ KYVE Y D+EK+ L R+KL+ + LLGSDYT
Sbjct: 827 DGIVTDDSDTFLFGGTRIYKNMFNQSKYVECYLSSDLEKEYTLDRKKLVSFSHLLGSDYT 886
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F + L +F++W
Sbjct: 887 EGIPGIGPVTALEILTEFSD---LEEFKDW 913
>gi|294660024|ref|XP_462477.2| DEHA2G21494p [Debaryomyces hansenii CBS767]
gi|199434412|emb|CAG90987.2| DEHA2G21494p [Debaryomyces hansenii CBS767]
Length = 1034
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 115/170 (67%), Gaps = 18/170 (10%)
Query: 850 VHAEAT-EKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYII 908
+H T E++L+E++Q K +R+++ V+ M + QELL+ FG+PYI
Sbjct: 743 IHTSITNEQLLQEQLQ--------------KAKRDSDEVTETMIRDVQELLRRFGIPYIT 788
Query: 909 APMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLG 968
APMEAEAQCA + NLVDG++TDDSD FLFG VYKN+F+ ++YVE Y M DI +G
Sbjct: 789 APMEAEAQCAELLKLNLVDGIITDDSDCFLFGGDKVYKNMFNQKQYVECYIMNDINSRMG 848
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIE 1018
L++EKLI +ALLLGSDYTEGI GIG V A+E++ F L KF++W +
Sbjct: 849 LSQEKLIDLALLLGSDYTEGIKGIGPVMAMEILAEF---GSLKKFKQWFD 895
>gi|74141150|dbj|BAE35888.1| unnamed protein product [Mus musculus]
Length = 644
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 103/146 (70%), Gaps = 2/146 (1%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ +R A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 480 LKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLTDQTSGTITD 539
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 540 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYSQLGLDRNKLINLAYLLGSDYTEGIPTV 599
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREW 1016
G V A+E++N FP D L KF EW
Sbjct: 600 GCVTAMEILNEFPGRGLDPLLKFSEW 625
>gi|336383338|gb|EGO24487.1| hypothetical protein SERLADRAFT_467880 [Serpula lacrymans var.
lacrymans S7.9]
Length = 413
Score = 172 bits (436), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 103/135 (76%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
R++E ++ +M ++ LL++FG+PYI APMEAEAQCA + LVDG++TDDSDVFLFG
Sbjct: 2 RDSEDITQQMISQIMLLLRLFGIPYITAPMEAEAQCAELVSLGLVDGIITDDSDVFLFGG 61
Query: 942 RSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+ V+KN+F+ K VE + + D+ ++LGL R LIR+A LLGSDY EG+SG+G V A+E++
Sbjct: 62 QRVFKNMFNQSKTVECFLLSDLGRELGLERGTLIRLAYLLGSDYVEGLSGVGPVVAMELL 121
Query: 1002 NAFPEEDGLSKFREW 1016
FP EDGL KF++W
Sbjct: 122 KEFPGEDGLHKFKDW 136
>gi|425769594|gb|EKV08085.1| DNA excision repair protein Rad2 [Penicillium digitatum Pd1]
gi|425771041|gb|EKV09495.1| DNA excision repair protein Rad2 [Penicillium digitatum PHI26]
Length = 1130
Score = 172 bits (436), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/150 (54%), Positives = 103/150 (68%), Gaps = 3/150 (2%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+ E L +Q+ R+A+ V++ M ECQ+LL +FGLPYI APMEAEAQCA + LV
Sbjct: 788 EQELKQLRSQQRNERRDADEVTTIMINECQQLLALFGLPYITAPMEAEAQCAKLVSLGLV 847
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
DG+VTDDSD+FLFG VYKN+F+ K+VE Y D+EK+ L R+KLI A LLGSDYT
Sbjct: 848 DGIVTDDSDIFLFGGTRVYKNMFNQSKFVECYLTSDLEKEYALHRQKLISFAHLLGSDYT 907
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
EGI GIG V A+E++ F L +FR W
Sbjct: 908 EGIPGIGPVTALEILTEF---SNLEEFRNW 934
>gi|145352686|ref|XP_001420669.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580904|gb|ABO98962.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 271
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 146/272 (53%), Gaps = 47/272 (17%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
M+ + QELL +FG+PYIIAP EAEAQCAY+ LVD V+TDDSDVFLFGA VY+N F
Sbjct: 1 MYRDVQELLTLFGIPYIIAPQEAEAQCAYLNQHKLVDAVITDDSDVFLFGASHVYRNFFS 60
Query: 951 DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFP--EED 1008
++KY E Y I+++LGL R++ I++ALLLGSDYTEG+ G+GIVNA+E+V+ F D
Sbjct: 61 EKKYCEVYTADRIKRELGLDRDRFIQLALLLGSDYTEGVGGVGIVNALEIVSVFKGNVMD 120
Query: 1009 GLSKFREWIESPDPTIL---------------GKFDVQTGASSRKRRSSDGDKDV--NYA 1051
FREWI+ + T++ D T A K RS +V NY
Sbjct: 121 ASKAFREWIDMEELTMVPERLLPSPSKTSAESATDDAITAAFKEKHRSLKKSWEVPANYP 180
Query: 1052 KNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHT--------------------- 1090
V ++ S+ Q +E + + +M ++F K
Sbjct: 181 SLEVVKAYQY-PSVDQSEETFEWGKPDLDMLRLFCIKTLSWTRDAADQILLPMMKSWSKR 239
Query: 1091 --QLRLEAFY----TFNERFAKIRSKRIKKAV 1116
Q R+++F+ + R AK RSKR+ AV
Sbjct: 240 DDQRRIDSFFETSHAVSSRVAKFRSKRLGDAV 271
>gi|148664472|gb|EDK96888.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Mus musculus]
Length = 1171
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 103/146 (70%), Gaps = 2/146 (1%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ +R A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 749 LKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLTDQTSGTITD 808
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 809 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYSQLGLDRNKLINLAYLLGSDYTEGIPTV 868
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREW 1016
G V A+E++N FP D L KF EW
Sbjct: 869 GCVTAMEILNEFPGRGLDPLLKFSEW 894
>gi|357620639|gb|EHJ72769.1| hypothetical protein KGM_08405 [Danaus plexippus]
Length = 1103
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 116/172 (67%), Gaps = 18/172 (10%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+++E L E+ KL+R +++ +M E QELLQ+FG+PYI+APMEAEAQCA +E L
Sbjct: 684 IENEEQLLLQEKGKLDRIGRNITEQMTKEAQELLQIFGIPYIVAPMEAEAQCAVLEALKL 743
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
DG +TDDSD++LFG R+VYKN F+ +K+V + + IEK L+REKL+ +ALL+GSDY
Sbjct: 744 TDGTITDDSDIWLFGGRTVYKNFFNQKKHVLQFLRERIEKSFNLSREKLVLLALLVGSDY 803
Query: 986 TEGISGIGIVNAIEVVNAFP-------EED-----------GLSKFREWIES 1019
T G++G+G V A+E++ +FP ED GL F++W+++
Sbjct: 804 TVGVTGVGPVTALEILASFPFNKKKTIAEDAKFTDYQEIVAGLQDFKKWVKA 855
>gi|74141263|dbj|BAE35937.1| unnamed protein product [Mus musculus]
Length = 898
Score = 172 bits (435), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 103/146 (70%), Gaps = 2/146 (1%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ +R A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 646 LKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLTDQTSGTITD 705
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 706 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYSQLGLDRNKLINLAYLLGSDYTEGIPTV 765
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREW 1016
G V A+E++N FP D L KF EW
Sbjct: 766 GCVTAMEILNEFPGRGLDPLLKFSEW 791
>gi|449676998|ref|XP_002156033.2| PREDICTED: DNA repair protein complementing XP-G cells-like, partial
[Hydra magnipapillata]
Length = 431
Score = 171 bits (434), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 150/242 (61%), Gaps = 14/242 (5%)
Query: 856 EKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEA 915
E L+ E++ L+ E + L E +K R A ++S+E++ + Q+LLQ+FG+PY+++PMEAEA
Sbjct: 64 EDFLKLEVE-LNKEKIELELETRKQTRQAATLSAEVYNDVQDLLQLFGIPYLVSPMEAEA 122
Query: 916 QCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLI 975
QCA + L L +G +TDDSD+FLFGA +VYKNIF+ K E Y +D+E L LTREKLI
Sbjct: 123 QCAALNLLKLTNGTITDDSDIFLFGAENVYKNIFNKDKIPECYSSKDLETLLYLTREKLI 182
Query: 976 RMALLLGSDYTEGISGIGIVNAIEVVNAFPE---EDGLSKFREWIESPDPT---ILGKFD 1029
+A L GSDYTEG+ G+G + A+E++ AF + E+ L+ FR W+ SP+ T +L +
Sbjct: 183 AVAFLTGSDYTEGLPGVGGITAMEILQAFAKKTAEETLANFRAWVMSPNVTGNKVLDRLK 242
Query: 1030 -------VQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMK 1082
+ + +S + + + V+ +K + ESI QF DK + +S ++
Sbjct: 243 AKLALDGIPSNFNSNEVWEAYLNPIVDQSKEKFEWGNPDIESIKQFASDKMAWSFSNTLE 302
Query: 1083 KI 1084
+
Sbjct: 303 TL 304
>gi|383863581|ref|XP_003707258.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Megachile rotundata]
Length = 1072
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 154/265 (58%), Gaps = 25/265 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
KLER +S + E QELL++FG+PYI+APMEAEAQCAY+E +L DG +TDDSD++L
Sbjct: 689 KLERQGIDISDRIRTEAQELLRLFGIPYIVAPMEAEAQCAYLEQIHLTDGTITDDSDIWL 748
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
FG + VYKN F++ K V + + DIE LTR ++I++ALL+GSDYT G++GIG V A+
Sbjct: 749 FGGQCVYKNFFNNNKKVLQFCLGDIEHHFKLTRNEMIQLALLVGSDYTVGLTGIGPVTAL 808
Query: 999 EVVNAFPEE-----DGLSKFREWIESPDPTILGKFDVQTGASSRKR-------------- 1039
E++ AFP + GL+ F W+E+ GK ++T + K
Sbjct: 809 EILAAFPSQGDNLLQGLADFCSWVETGKVAAPGKAGLRTKLQNLKVHKGFPSQAVVQAYL 868
Query: 1040 --RSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAF 1097
+ + + + K ++ + ++ + +D++K +A + K++ +K TQ ++ +
Sbjct: 869 FPKVDESKEGFTWGKPNMMLLYDYTKKKFAWDKNKFNAVMTPVQKRLEENK-TQKLIDMY 927
Query: 1098 Y---TFNERFAKIRSKRIKKAVKGI 1119
+ T + SKR++KAV+ +
Sbjct: 928 FKLQTVPQSIEMTLSKRVQKAVQKL 952
>gi|378725893|gb|EHY52352.1| DNA excision repair protein ERCC-5 [Exophiala dermatitidis
NIH/UT8656]
Length = 1319
Score = 171 bits (433), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 109/157 (69%), Gaps = 3/157 (1%)
Query: 860 EEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 919
E+ ++ ++E L ++QKK R+A+ V+ M ECQ LL++FGLPYI APMEAEAQCA
Sbjct: 958 EQAIRDYENELKQLRNQQKKDRRDADDVTQVMVQECQALLRLFGLPYITAPMEAEAQCAE 1017
Query: 920 MELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMAL 979
+ LVDG+VTDDSD+FLFG +YKN+F+ K+VE Y D+EK+ L R +LI A
Sbjct: 1018 LVRLGLVDGIVTDDSDIFLFGGTRIYKNMFNAAKFVECYLASDLEKEFLLDRRRLISFAH 1077
Query: 980 LLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
LLGSDYTEGI GIG V A+E++ F + L +F+ W
Sbjct: 1078 LLGSDYTEGIPGIGPVTALEILTDF---ESLDEFKAW 1111
>gi|395527335|ref|XP_003765805.1| PREDICTED: uncharacterized protein LOC100931484 [Sarcophilus
harrisii]
Length = 1088
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 111/164 (67%), Gaps = 6/164 (3%)
Query: 859 LEEEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAE 914
L EE++ L++ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAE
Sbjct: 635 LVEELETLENNLLVEQNSLEAQKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAE 694
Query: 915 AQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKL 974
AQCA ++L + G +TDDSD++LFGAR VYKN F K+VE Y D LGL R KL
Sbjct: 695 AQCAILDLTDQTSGTITDDSDIWLFGARHVYKNFFSKDKFVEYYQYIDFHNQLGLDRSKL 754
Query: 975 IRMALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREW 1016
I +A LLGSDYTEGI +G V A+E++N FP + L KF EW
Sbjct: 755 INLAYLLGSDYTEGIPSVGCVTAMEILNEFPGRGLEPLLKFSEW 798
>gi|389749913|gb|EIM91084.1| PIN domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 1350
Score = 171 bits (432), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 107/151 (70%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L ++K R++E V+ M ++ +L++FG+PYI APMEAEAQCA + L
Sbjct: 881 IDEEIKGLNQQRKAAMRDSEDVTQHMISQIMIMLRLFGIPYITAPMEAEAQCATLVQLGL 940
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
V+G++TDDSDVFLFG V+KN+F+ K VE + + D+ ++LGL R KL+++A LLGSDY
Sbjct: 941 VEGIITDDSDVFLFGGLRVFKNMFNQSKTVECFLLSDLARELGLERNKLVQLAYLLGSDY 1000
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
TEG+ G+G V A+E++ F +D LS FREW
Sbjct: 1001 TEGLPGVGPVVAMELLKEFHGDDALSDFREW 1031
>gi|19112887|ref|NP_596095.1| DNA repair nuclease Rad13 [Schizosaccharomyces pombe 972h-]
gi|13432230|sp|P28706.2|RAD13_SCHPO RecName: Full=DNA repair protein rad13
gi|3130034|emb|CAA19011.1| DNA repair nuclease Rad13 [Schizosaccharomyces pombe]
Length = 1112
Score = 170 bits (431), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/237 (39%), Positives = 143/237 (60%), Gaps = 28/237 (11%)
Query: 848 ENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYI 907
E + EA EK L+E L ++++ +R+A+ V+ M ECQELL++FGLPYI
Sbjct: 724 EEWNQEAFEKRLKE-----------LKNQKRSEKRDADEVTQVMIKECQELLRLFGLPYI 772
Query: 908 IAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDL 967
+AP EAEAQC+ + LVDG+VTDDSDVFLFG VY+N+F+ K+VE Y M D++++
Sbjct: 773 VAPQEAEAQCSKLLELKLVDGIVTDDSDVFLFGGTRVYRNMFNQNKFVELYLMDDMKREF 832
Query: 968 GLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGK 1027
+ + LI++A LLGSDYT G+S +G V A+E+++ FP + GL +F++W +
Sbjct: 833 NVNQMDLIKLAHLLGSDYTMGLSRVGPVLALEILHEFPGDTGLFEFKKWFQR-------- 884
Query: 1028 FDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEF-----DESISQ--FDEDKQSAEY 1077
+ TG +S+ ++ K +N + SEF DE+ D+ KQS ++
Sbjct: 885 --LSTGHASKNDVNTPVKKRINKLVGKIILPSEFPNPLVDEAYLHPAVDDSKQSFQW 939
>gi|417406083|gb|JAA49718.1| Putative 5'-3' exonuclease [Desmodus rotundus]
Length = 1189
Score = 170 bits (431), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 148/271 (54%), Gaps = 28/271 (10%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 757 LKAKKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPMEAEAQCAILDLTDQTSGTITD 816
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEG+ +
Sbjct: 817 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIILAYLLGSDYTEGVPTV 876
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP-------------TILGKFD 1029
G V A+E++N FP + + L F EW P+P LG +
Sbjct: 877 GCVTAMEILNEFPGQGLEPLLNFSEWWHEAQKNKKIRPNPYDTKVKKKLRKLQLPLGFPN 936
Query: 1030 VQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
+ K D + K + + EF + ++ K +K++ +
Sbjct: 937 TAVADAYLKPVVDDSRGSFLWGKPDLDKIREFCQRYFGWNRTKTDESLFPVLKQM-NAQQ 995
Query: 1090 TQLRLEAFYTFNERFAK----IRSKRIKKAV 1116
TQLR+++F+ ++ + I+S+R+ +AV
Sbjct: 996 TQLRIDSFFRLAQQEKQDAKGIKSQRLNRAV 1026
>gi|384493818|gb|EIE84309.1| hypothetical protein RO3G_09019 [Rhizopus delemar RA 99-880]
Length = 816
Score = 170 bits (430), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 113/152 (74%), Gaps = 8/152 (5%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L +Q+K + N++ ++ +M + QELL++FG+PYI++PMEAEAQCA +E L++G +TD
Sbjct: 639 LNAQQRKDKGNSDDITDQMIGDIQELLKLFGIPYIVSPMEAEAQCAALERLKLIEGTITD 698
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFGA VYKN+F+ +++VE Y +DIE+++ L+R KLI++A LLGSDYTEGI G+
Sbjct: 699 DSDVFLFGASRVYKNMFNQQRFVECYRTEDIEREMMLSRNKLIQLAYLLGSDYTEGIPGV 758
Query: 993 GIVNAIEVVNAFPEEDG--------LSKFREW 1016
G V A+E+++ FP + L KF++W
Sbjct: 759 GPVAAMEILDEFPSDTQDDDDIDGPLKKFKDW 790
>gi|388583607|gb|EIM23908.1| PIN domain-like protein [Wallemia sebi CBS 633.66]
Length = 1046
Score = 170 bits (430), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 102/139 (73%)
Query: 878 KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVF 937
KK+ ++ + +M E Q+LL+ FG+PYI APMEAEAQCA + NLVD V+TDDSDVF
Sbjct: 708 KKMSGGSDDPTMQMTGEIQKLLRAFGIPYITAPMEAEAQCAKLAQMNLVDAVITDDSDVF 767
Query: 938 LFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNA 997
LFGA VYKN+F+DR++VE Y DIE+DL L+R++LI +A +LGSDYT G G+G V A
Sbjct: 768 LFGAPIVYKNMFNDRQFVECYVSSDIERDLSLSRDRLIELAHILGSDYTNGFPGVGPVMA 827
Query: 998 IEVVNAFPEEDGLSKFREW 1016
+E++ F E+ L FR+W
Sbjct: 828 MELLADFAHENTLVGFRDW 846
>gi|361129990|gb|EHL01866.1| putative DNA repair protein rad13 [Glarea lozoyensis 74030]
Length = 1157
Score = 169 bits (429), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 108/160 (67%), Gaps = 3/160 (1%)
Query: 869 EYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDG 928
E L ++QKK R+A+ V+S M ECQ LL+ FG+PYIIAP EAEAQCA + LVDG
Sbjct: 758 ELKALRNQQKKDRRDADDVTSAMNQECQILLKKFGIPYIIAPGEAEAQCAELVRQGLVDG 817
Query: 929 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEG 988
+TDD D+FLFG VYKN+F+ K VE Y +DIE++L L R+++I +A LLGSDY EG
Sbjct: 818 AITDDCDIFLFGGTRVYKNLFNSNKDVECYLQKDIEQELSLGRDQMISLAQLLGSDYAEG 877
Query: 989 ISGIGIVNAIEVVNAFPEEDGLSKFREW---IESPDPTIL 1025
+ G+G V AIE+++ F GL F+ W ++ P P L
Sbjct: 878 LHGVGSVTAIELLSEFSSPTGLQDFKHWWTSVQGPHPPPL 917
>gi|340500548|gb|EGR27416.1| hypothetical protein IMG5_195980 [Ichthyophthirius multifiliis]
Length = 989
Score = 169 bits (429), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 167/298 (56%), Gaps = 55/298 (18%)
Query: 860 EEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 919
EE+++I +++ L E N+E++ + F + ++LL +FG+P++ +P EAEAQCA+
Sbjct: 639 EEQLEIESQKFINLN------EINSETIQFK-FQQIKQLLILFGIPWVESPSEAEAQCAF 691
Query: 920 MELANLVDGVVTDDSDVFLFGARSVYKNIF-DDRKYVETYFMQDIEKDLGLTREKLIRMA 978
+E+ LVDG+VTDDSDVFLFG R VY+N+F + +YV +++IEKDLGL R++LI MA
Sbjct: 692 LEMHQLVDGIVTDDSDVFLFGGRKVYRNLFSQNSQYVRYINIENIEKDLGLDRQRLILMA 751
Query: 979 LLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW-----IESPDPTILGKFDVQTG 1033
L LGSDYT GI G+GIVN+ E+V AF D L +F+ W I DP+I T
Sbjct: 752 LFLGSDYTLGIKGVGIVNSFEIVTAFDNMDALKRFKIWASKADILLEDPSIHY-----TN 806
Query: 1034 ASSRKRRSSDGDKDVNYAKN--------SVGGVSEF-----DESISQFDEDKQSAE---- 1076
S +++ + K N+ KN S V+ + DES+ F K + +
Sbjct: 807 ISIKEKNYKEYHK--NFKKNWEIPNDFPSCKVVNAYLKPKIDESLEAFKWAKPNFDLLKL 864
Query: 1077 YSQNM----------------KKIF--MDKHTQLRLEAFYTFNERFAKIRSKRIKKAV 1116
Y ++M KK+ + Q+R+ +Y +FA I S RI+KA+
Sbjct: 865 YCKSMFGWDYALIQDTIEPLEKKVNSEIGVQVQMRITDYYKQASKFALINSNRIQKAI 922
>gi|303270955|ref|XP_003054839.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462813|gb|EEH60091.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 237
Score = 169 bits (429), Expect = 8e-39, Method: Composition-based stats.
Identities = 76/127 (59%), Positives = 102/127 (80%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
M AE Q+LL +FG+PYIIAP EAEAQCA+++ VD V+TDDSD FLFGA+++Y+N+F+
Sbjct: 1 MHAEVQQLLTLFGIPYIIAPQEAEAQCAWLDREGFVDAVITDDSDAFLFGAKTIYRNVFE 60
Query: 951 DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL 1010
+KYVE Y ++ DLGL R K+ ++ALLLGSDYTEG++G+GIVNA+EVV FP +GL
Sbjct: 61 SKKYVEFYDANRVDADLGLDRAKMAQLALLLGSDYTEGVTGVGIVNALEVVLNFPGVEGL 120
Query: 1011 SKFREWI 1017
+KF EW+
Sbjct: 121 TKFAEWV 127
>gi|448121834|ref|XP_004204307.1| Piso0_000145 [Millerozyma farinosa CBS 7064]
gi|358349846|emb|CCE73125.1| Piso0_000145 [Millerozyma farinosa CBS 7064]
Length = 1063
Score = 169 bits (429), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 136/242 (56%), Gaps = 39/242 (16%)
Query: 795 VGTSDTSIPLVKTSG--------NASIYDTDI---------EQKSAEERTPDTYLKDSKQ 837
+G SDT P V S +YD D +Q EE ++ K+
Sbjct: 706 LGVSDTKEPNVAQSSIDTRNSERRPHLYDYDFLDREEESLADQLHEEEEDHLNFVSQIKE 765
Query: 838 NTGIFATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQE 897
N GI I N KI +E L HE M K +R+++ + M ++ QE
Sbjct: 766 NEGI----PIHNT------KITDE---ALLHEQML------KAKRDSDEPTQNMISDVQE 806
Query: 898 LLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVET 957
LL+ FG+PYIIAPMEAEAQCA + LVDG++TDDSD FLFG VYKN+F+ +KYVE
Sbjct: 807 LLKRFGIPYIIAPMEAEAQCAELMRIGLVDGIITDDSDCFLFGGDKVYKNMFNQKKYVEC 866
Query: 958 YFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWI 1017
Y +DIE LGL+++ LI +ALLLGSDYT G+ GIG V A+E++ F L KF+EW
Sbjct: 867 YSQKDIESHLGLSQDNLIELALLLGSDYTRGVKGIGPVLAVEILAEF---GSLEKFKEWF 923
Query: 1018 ES 1019
++
Sbjct: 924 DA 925
>gi|5020|emb|CAA47291.1| excision repair protein [Schizosaccharomyces pombe]
Length = 1113
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 129/204 (63%), Gaps = 17/204 (8%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
+R+A+ V+ M ECQELL++FGLPYI+AP EAEAQC+ + LVDG+VTDDSDVFLFG
Sbjct: 747 KRDADEVTQVMIKECQELLRLFGLPYIVAPQEAEAQCSKLLELKLVDGIVTDDSDVFLFG 806
Query: 941 ARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEV 1000
VY+N+F+ K+VE Y M D++++ + + LI++A LLGSDYT G+S +G V A+E+
Sbjct: 807 GTRVYRNMFNQNKFVELYLMDDMKREFNVNQMDLIKLAHLLGSDYTMGLSRVGPVLALEI 866
Query: 1001 VNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSE 1060
++ FP + GL +F++W + + TG +S+ ++ K +N + SE
Sbjct: 867 LHEFPGDTGLFEFKKWFQR----------LSTGHASKNDVNTPVKKRINKLVGKIILPSE 916
Query: 1061 F-----DESISQ--FDEDKQSAEY 1077
F DE+ D+ KQS ++
Sbjct: 917 FPNPLVDEAYLHPAVDDSKQSFQW 940
>gi|307176270|gb|EFN65901.1| DNA-repair protein complementing XP-G cells [Camponotus floridanus]
Length = 1193
Score = 169 bits (428), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/150 (50%), Positives = 106/150 (70%), Gaps = 5/150 (3%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K ER A ++S ++ E QELL++FG+PYI+APMEAEAQCAY+E L +G +TDDSD++L
Sbjct: 810 KFERQATNISDQIQTEAQELLRLFGIPYIVAPMEAEAQCAYLEQIELTNGTITDDSDIWL 869
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
FG + VYKN F++ + V + DI+ L+R +LI++ALL+GSDYT G++GIG V A+
Sbjct: 870 FGGQYVYKNFFNNNRRVLQFHAYDIQHHFKLSRNQLIQLALLVGSDYTTGVAGIGPVTAL 929
Query: 999 EVVNAFPEE-----DGLSKFREWIESPDPT 1023
E++ AFP E GL KF WI+ P+
Sbjct: 930 EILAAFPAEGDNILHGLYKFCSWIKEGKPS 959
>gi|334346854|ref|XP_001376389.2| PREDICTED: hypothetical protein LOC100025456 [Monodelphis domestica]
Length = 1410
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/167 (50%), Positives = 112/167 (67%), Gaps = 6/167 (3%)
Query: 856 EKILEEEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
E I EE++ L++ + L ++++ ER A +V+ +MF E QELL++FG+PYI APM
Sbjct: 883 EDINLEELEALENNLLVEQNSLKAQKQQQERIAATVTGQMFLESQELLRLFGIPYIEAPM 942
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTR 971
EAEAQCA ++L + G +TDDSD++LFGAR VYKN F K+VE Y D LGL R
Sbjct: 943 EAEAQCAILDLTDQTSGTITDDSDIWLFGARHVYKNFFSKDKFVEYYQYVDFHNQLGLDR 1002
Query: 972 EKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREW 1016
KLI +A LLGSDYTEGI +G V A+E++N FP + L KF EW
Sbjct: 1003 SKLINLAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEW 1049
>gi|448124207|ref|XP_004204862.1| Piso0_000145 [Millerozyma farinosa CBS 7064]
gi|358249495|emb|CCE72561.1| Piso0_000145 [Millerozyma farinosa CBS 7064]
Length = 1067
Score = 169 bits (427), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 127/207 (61%), Gaps = 13/207 (6%)
Query: 813 IYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQILDHEYMY 872
+YD D + E + ++ + K EN+ + T KI +E L HE M
Sbjct: 736 LYDYDFIDREEESLVDQLHEEEEDHLNFVSQIKENENIPIQNT-KITDE---ALLHEQML 791
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
K +R+++ + M ++ QELL+ FG+PYIIAPMEAEAQCA + LVDG++TD
Sbjct: 792 ------KAKRDSDEPTQNMISDVQELLKRFGIPYIIAPMEAEAQCAELMRIGLVDGIITD 845
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD FLFG VYKN+F+ +KYVE Y +DIE LGL+++ LI +ALLLGSDYT G+ GI
Sbjct: 846 DSDCFLFGGDKVYKNMFNQKKYVECYSQKDIESHLGLSQDNLIELALLLGSDYTRGVKGI 905
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIES 1019
G V A+E++ F L KF+EW ++
Sbjct: 906 GPVLAVEILAEF---GSLEKFKEWFDT 929
>gi|403177167|ref|XP_003335732.2| hypothetical protein PGTG_17170 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172758|gb|EFP91313.2| hypothetical protein PGTG_17170 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1403
Score = 168 bits (426), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 115/174 (66%), Gaps = 14/174 (8%)
Query: 859 LEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
LE Q D E L +++ K R+A+ V+ +M + Q LL++FG+P++++PMEAEAQCA
Sbjct: 924 LEGIRQEADSEVQRLKEQKAKDRRDADDVNLQMSQDIQNLLKLFGIPFVVSPMEAEAQCA 983
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMA 978
+ LVDG++TDDSDVFLFG VYKN+F+ K+VE Y M D++++LGL ++KLI++A
Sbjct: 984 ELLKLGLVDGIITDDSDVFLFGGHRVYKNLFNQNKFVECYLMNDLDQELGLDQQKLIQLA 1043
Query: 979 LLLGSDYTEGISGIGIVNAIEVVNAF--------------PEEDGLSKFREWIE 1018
LLGSDYT G++G+G V A+E+++ F P GL F+ W E
Sbjct: 1044 FLLGSDYTVGLNGVGPVTAMEILSEFDPAFSAGVATAHHNPNLSGLLNFKNWWE 1097
>gi|47230549|emb|CAF99742.1| unnamed protein product [Tetraodon nigroviridis]
Length = 866
Score = 168 bits (425), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 107/153 (69%), Gaps = 2/153 (1%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
L E L + Q++ ER A +V+ +M+ E QELL++FG+P++IAPMEAEAQCA ++ A+
Sbjct: 648 LQAEQNSLKELQQQQERMASTVTGQMYLESQELLRLFGVPFLIAPMEAEAQCAALDRADH 707
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
G +TDDSDV+LFG R VYKN F KYVE + D++ LGL R KLI +A LLGSDY
Sbjct: 708 THGTITDDSDVWLFGGRHVYKNFFSQNKYVEYFQYSDLQNALGLDRTKLINLAYLLGSDY 767
Query: 986 TEGISGIGIVNAIEVVNAF--PEEDGLSKFREW 1016
TEG++G+G V +EV+N F P + L +F +W
Sbjct: 768 TEGVAGVGYVTGMEVLNEFTGPGLEPLVQFSKW 800
>gi|328857380|gb|EGG06497.1| hypothetical protein MELLADRAFT_36164 [Melampsora larici-populina
98AG31]
Length = 288
Score = 168 bits (425), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 125/177 (70%), Gaps = 8/177 (4%)
Query: 847 IENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPY 906
+E+++ + K+ + Q+ D E L D++ K R+A+ V+ +M + Q +L++FG+PY
Sbjct: 85 VEHLYFSSIFKLDDMRHQV-DAEVNKLKDQRVKDRRDADDVNLQMSKDIQSMLRLFGIPY 143
Query: 907 IIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKD 966
+I+PMEAEAQCA + LVDG++TDDSDVFLFG VYKN+F+ K+VE Y M D+EK+
Sbjct: 144 VISPMEAEAQCAELLKKGLVDGIITDDSDVFLFGGTRVYKNMFNQNKFVECYLMNDLEKE 203
Query: 967 LGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEE-------DGLSKFREW 1016
LGL+R++LI++A LLGSDYTEG++G+G V A+E+++ F +E D L F+ W
Sbjct: 204 LGLSRQRLIQLAYLLGSDYTEGLAGVGPVTAMEILSEFDDEHLTVAGLDSLINFKRW 260
>gi|353238841|emb|CCA70774.1| related to RAD2-structure-specific nuclease of the nucleotide
excision repairosome [Piriformospora indica DSM 11827]
Length = 1153
Score = 167 bits (423), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 198/399 (49%), Gaps = 50/399 (12%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L +K L+R++E ++ +M ++ LL++FG+PYI APMEAEAQCA + L
Sbjct: 754 IDQEIKQLNQARKVLQRDSEEITQQMVSQIMMLLRLFGIPYITAPMEAEAQCAKLLSLGL 813
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
V+GV+TDDSDVFLFGA V+KN+F+ K VE + D++++LGL +EKLIR+A LLGSDY
Sbjct: 814 VEGVITDDSDVFLFGATRVFKNMFNQSKTVECFLAADLQRELGLDQEKLIRLAYLLGSDY 873
Query: 986 TEGISGIGIVNAIEVVNAF----PEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRS 1041
+G+ G+G V A+E++N F +ED L +F+EW VQ+G +
Sbjct: 874 VDGLEGVGPVVAMEILNEFETAGKQEDSLLRFKEWWRR----------VQSGQDTENDTG 923
Query: 1042 SDGDKDVNYAKNSVGGVSEFDESISQ-------FDEDKQSAEYS-QNMKKIFMDKHTQLR 1093
++ K ++ ++ + DE +++ ++ ++ + H +L
Sbjct: 924 TEFRKRFKKKFKNLHLAGDWPNPAVRDAYLHPTVDESEEAFKWGLPDLDALRTFLHEELH 983
Query: 1094 LEAFYTFNERFAKIRSKRIKKAVKGITGSQSLL--LMDDAGQEVSKSRKKRKNNGLENGN 1151
T +E I K ++ +TG Q L D +G S + RK
Sbjct: 984 WVQAKT-DELLLPIIRKMGERGRNPVTGRQGTLTGYFDQSGGFGSGTLAPRK-------- 1034
Query: 1152 NRSQKAPKKAEESVSGAQNNMEKSSQSQSRERKVLEKFVLAEMENPERLTPAGGGRNANN 1211
R Q A K+ ++ VS + ++S S S L K LA NP + P GG R ++
Sbjct: 1035 -RQQFASKRLQQVVSDYRKKQDRSV-STSDSEVALHKQNLA---NPPK--PRGGKRMKSD 1087
Query: 1212 VFRGNRRGKGQRVGRGRGRRRLCAEQSETSSSDDIGSDD 1250
+GR + RRR + + + G DD
Sbjct: 1088 A----------TIGRPQKRRRTIRAEDHEDVATESGGDD 1116
>gi|291235424|ref|XP_002737645.1| PREDICTED: DNA-repair protein complementing XP-G cells homolog
[Saccoglossus kowalevskii]
Length = 854
Score = 167 bits (422), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 120/180 (66%), Gaps = 12/180 (6%)
Query: 842 FATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQM 901
+A K +E V A E LD+E + L E+ K ER S++ +M+ E +ELL +
Sbjct: 619 WAGKTLEEVEAMEVE---------LDNEGVALMAEKNKQERFGASITDQMYVEAKELLTL 669
Query: 902 FGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQ 961
FGLPYI + EAEAQCAY+ L + G +TDDSD++LFG + VYKN+F+ +K+VE Y +
Sbjct: 670 FGLPYITSVQEAEAQCAYLNLTDQTYGTITDDSDIWLFGGKRVYKNMFNQKKFVECYIAE 729
Query: 962 DIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDG---LSKFREWIE 1018
+IE+ L L R+K+I++A L+GSDYT GI+GIG V A+E+++ F D L+KFREW E
Sbjct: 730 NIERQLLLNRDKMIQIAYLVGSDYTTGITGIGGVTAMELLHEFEGGDKLEPLNKFREWWE 789
>gi|402224833|gb|EJU04895.1| hypothetical protein DACRYDRAFT_104789 [Dacryopinax sp. DJM-731 SS1]
Length = 1334
Score = 167 bits (422), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 106/151 (70%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
+D E L +++ +E V+ +M + Q +L++FG+PY +APMEAEAQCA + L
Sbjct: 947 IDEEINTLNQQRRAALVASEDVTLQMITQIQNMLRLFGIPYTVAPMEAEAQCAELVQLGL 1006
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
V+G++TDDSDVFLFG V+KN+F+ K VE + + D+ ++L L R+KLIR+A LLGSDY
Sbjct: 1007 VEGIITDDSDVFLFGGLRVFKNMFNQSKTVECFLLSDLGRELSLDRDKLIRLAYLLGSDY 1066
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
+G+ +G V A+E++ FP EDGL KF+EW
Sbjct: 1067 VDGLPKVGPVVAMELLREFPGEDGLHKFKEW 1097
>gi|410076602|ref|XP_003955883.1| hypothetical protein KAFR_0B04510 [Kazachstania africana CBS 2517]
gi|372462466|emb|CCF56748.1| hypothetical protein KAFR_0B04510 [Kazachstania africana CBS 2517]
Length = 988
Score = 167 bits (422), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 110/157 (70%), Gaps = 5/157 (3%)
Query: 862 EMQILDHEYMY--LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 919
E I D +M L ++Q K +R+++ V+ +M + QELL FG+P++ APMEAEAQCA
Sbjct: 696 EHNIADTAFMEDELFEQQTKDKRDSDEVTMDMITDVQELLSRFGIPFVTAPMEAEAQCAE 755
Query: 920 MELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMAL 979
+ LVDG++TDDSDVFLFG VYKN+F D+KYVE Y IEK LG+ R+K+I +AL
Sbjct: 756 LIALGLVDGIITDDSDVFLFGGTKVYKNLFQDKKYVEFYNYDTIEKSLGIDRKKMIELAL 815
Query: 980 LLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
LLGSDYT GI G+G V+++E++ F D L F+EW
Sbjct: 816 LLGSDYTTGIKGMGPVSSMEILAEF---DDLKNFKEW 849
>gi|320167228|gb|EFW44127.1| DNA-repair protein rad13 [Capsaspora owczarzaki ATCC 30864]
Length = 1235
Score = 166 bits (420), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 97/138 (70%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E + ER+ SV SEM A+ QELL++FG+PY+ APMEAEAQCA ++LA + DG +T+DSD
Sbjct: 874 ELNRYERDVASVDSEMIADTQELLRLFGMPYLTAPMEAEAQCAALDLAGITDGTITEDSD 933
Query: 936 VFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
VFLFGAR VY+N F+ KY E Y IE L L REKLI +ALLLGSDYT G+ IG V
Sbjct: 934 VFLFGARRVYRNFFNPNKYAEFYASSAIESYLALDREKLIDLALLLGSDYTSGVERIGPV 993
Query: 996 NAIEVVNAFPEEDGLSKF 1013
A+E++ FP + F
Sbjct: 994 LAMEILGDFPSLQEFATF 1011
>gi|255721529|ref|XP_002545699.1| hypothetical protein CTRG_00480 [Candida tropicalis MYA-3404]
gi|240136188|gb|EER35741.1| hypothetical protein CTRG_00480 [Candida tropicalis MYA-3404]
Length = 963
Score = 166 bits (420), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 112/163 (68%), Gaps = 11/163 (6%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++ +K +R+++ V+ M + QELL+ FG+P+I APMEAEAQCA + LVDG+VTD
Sbjct: 687 LREKLQKAKRDSDEVTEAMINDVQELLRRFGIPFITAPMEAEAQCAELFRIGLVDGIVTD 746
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD FLFG +YKN+FD ++YVE Y D+ +GLTR+KLI +ALLLGSDYTEGI GI
Sbjct: 747 DSDCFLFGGDKIYKNMFDQKQYVECYMQDDLSTKMGLTRKKLIELALLLGSDYTEGIKGI 806
Query: 993 GIVNAIEVVNAFPEEDGLSKFREW--------IESPDPTILGK 1027
G V A+E++ F + L KF++W ++ +PT L K
Sbjct: 807 GPVLAMEILAEFGD---LKKFKQWFDQHTKSQVDKSNPTTLQK 846
>gi|405975699|gb|EKC40248.1| DNA repair protein complementing XP-G cells-like protein [Crassostrea
gigas]
Length = 1005
Score = 166 bits (420), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 107/155 (69%), Gaps = 2/155 (1%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
L+ E L E+ + ER A S+S +M+ E Q+LL++FG+P++++P EAEAQCA+++ ANL
Sbjct: 612 LELETRALQQERGRQERLATSLSDQMYLEAQDLLKLFGVPFVLSPTEAEAQCAWLDSANL 671
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
+G +TDDSD++LFG R VYKN F+ + VE + I+ LGL RE I MALL GSDY
Sbjct: 672 TNGTITDDSDIWLFGGRRVYKNFFNQDRTVELFMNDSIQSQLGLNREIFINMALLCGSDY 731
Query: 986 TEGISGIGIVNAIEVVNAFPEED--GLSKFREWIE 1018
T+GI G+G V A+E+++ FP D L F+ W E
Sbjct: 732 TDGIPGVGPVTAMEILSEFPAADLSALQAFKSWWE 766
>gi|238881502|gb|EEQ45140.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 990
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 103/146 (70%), Gaps = 3/146 (2%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++ +K +R+++ V+ M + QELL+ FG+PYI APMEAEAQCA + LVDG+VTD
Sbjct: 711 LQEKFQKAKRDSDEVTEAMINDVQELLKRFGIPYITAPMEAEAQCAELYKIGLVDGIVTD 770
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD FLFG +YKN+FD ++YVE Y D+ + LT+ KLI +ALLLGSDYTEGI GI
Sbjct: 771 DSDCFLFGGDKIYKNMFDQKQYVEFYLQDDLFNKMALTQHKLIELALLLGSDYTEGIKGI 830
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIE 1018
G V A+E++ F L KF+EW +
Sbjct: 831 GPVQAMEILAEF---GNLEKFKEWFD 853
>gi|68486229|ref|XP_709963.1| hypothetical protein CaO19.1324 [Candida albicans SC5314]
gi|68486286|ref|XP_713000.1| hypothetical protein CaO19.8904 [Candida albicans SC5314]
gi|46434429|gb|EAK93839.1| hypothetical protein CaO19.8904 [Candida albicans SC5314]
gi|46434462|gb|EAK93871.1| hypothetical protein CaO19.1324 [Candida albicans SC5314]
Length = 990
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 103/146 (70%), Gaps = 3/146 (2%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++ +K +R+++ V+ M + QELL+ FG+PYI APMEAEAQCA + LVDG+VTD
Sbjct: 711 LQEKFQKAKRDSDEVTETMINDVQELLKRFGIPYITAPMEAEAQCAELYKIGLVDGIVTD 770
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD FLFG +YKN+FD ++YVE Y D+ + LT+ KLI +ALLLGSDYTEGI GI
Sbjct: 771 DSDCFLFGGDKIYKNMFDQKQYVEFYLQDDLFNKMALTQHKLIELALLLGSDYTEGIKGI 830
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIE 1018
G V A+E++ F L KF+EW +
Sbjct: 831 GPVQAMEILAEF---GNLEKFKEWFD 853
>gi|241954550|ref|XP_002419996.1| DNA-repair protein RAD2 orthologue, putative; single-stranded DNA
endonuclease, putative [Candida dubliniensis CD36]
gi|223643337|emb|CAX42212.1| DNA-repair protein RAD2 orthologue, putative [Candida dubliniensis
CD36]
Length = 992
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 106/155 (68%), Gaps = 3/155 (1%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++ +K +R+++ V+ M + QELL+ FG+PYI APMEAEAQCA + LVDG+VTD
Sbjct: 713 LQEKFQKAKRDSDEVTEAMINDVQELLKRFGIPYITAPMEAEAQCAELFKIGLVDGIVTD 772
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD FLFG +YKN+FD ++YVE Y D+ + LT+ KLI +ALLLGSDYTEGI GI
Sbjct: 773 DSDCFLFGGDKIYKNMFDQKQYVEFYLQDDLFNKMALTQHKLIELALLLGSDYTEGIKGI 832
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGK 1027
G V A+E++ F L KF+EW + T+ K
Sbjct: 833 GPVQAMEILAEF---GNLEKFKEWFDKHAKTVADK 864
>gi|403217913|emb|CCK72405.1| hypothetical protein KNAG_0K00370 [Kazachstania naganishii CBS 8797]
Length = 979
Score = 166 bits (419), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/146 (52%), Positives = 107/146 (73%), Gaps = 3/146 (2%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L D+Q K +R+A+ V+ +M + QELL FG+P+I++PMEAEAQCA + NLVDG++TD
Sbjct: 699 LFDQQVKDKRDADEVTPQMVEDIQELLSRFGIPFIVSPMEAEAQCAELLGLNLVDGIITD 758
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG VYKN+F DRKYVE Y + I + LG+ R ++I +ALLLGSDYT GI +
Sbjct: 759 DSDVFLFGGTKVYKNLFQDRKYVEYYDYETIVRSLGIDRAQMIELALLLGSDYTPGIKSM 818
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIE 1018
G V+++E++ F + LS+F+ W E
Sbjct: 819 GPVSSVEILAEFGD---LSEFKRWYE 841
>gi|448530440|ref|XP_003870064.1| Rad2 protein [Candida orthopsilosis Co 90-125]
gi|380354418|emb|CCG23933.1| Rad2 protein [Candida orthopsilosis]
Length = 995
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 106/146 (72%), Gaps = 3/146 (2%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++ +K +R+++ V+ M ++ QELL+ FG+PYI APMEAEAQCA + LVDG++TD
Sbjct: 715 LQEKLQKAKRDSDEVTENMISDVQELLKRFGIPYITAPMEAEAQCAELFRIGLVDGIITD 774
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD FLFG +YKN+F+ +++VE YF DIE +GL+RE LI +A+LLGSDYT+GI GI
Sbjct: 775 DSDCFLFGGDRIYKNMFNQKQFVECYFKDDIEDRIGLSRENLIELAILLGSDYTQGIKGI 834
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIE 1018
G V A+E++ F L +F+ W +
Sbjct: 835 GPVLAVEILAEF---GSLKRFKSWFD 857
>gi|190346361|gb|EDK38425.2| hypothetical protein PGUG_02523 [Meyerozyma guilliermondii ATCC 6260]
Length = 1035
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 105/146 (71%), Gaps = 3/146 (2%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++ K +R+++ V+ M + QELL+ FG+PYI APMEAEAQCA + LVDG++TD
Sbjct: 757 LQEQYNKAKRDSDEVTETMIRDVQELLKRFGIPYITAPMEAEAQCAELMKLGLVDGIITD 816
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD FLFG + VYKN+F+ ++YVE YF+ +I +GL ++ LI +ALLLGSDYTEGI GI
Sbjct: 817 DSDCFLFGGQKVYKNMFNQKQYVECYFIDEISHKVGLDQKNLIELALLLGSDYTEGIKGI 876
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIE 1018
G V A+E++ F L+ F+ W++
Sbjct: 877 GPVMAVEILAEF---SNLTNFKNWLD 899
>gi|242000896|ref|XP_002435091.1| DNA-repair protein xp-G, putative [Ixodes scapularis]
gi|215498421|gb|EEC07915.1| DNA-repair protein xp-G, putative [Ixodes scapularis]
Length = 868
Score = 165 bits (417), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/144 (50%), Positives = 102/144 (70%), Gaps = 3/144 (2%)
Query: 878 KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVF 937
+K +R A S+S ++ ECQELL+MFGLP++++P EAEAQCA++E L G VTDDSD +
Sbjct: 631 RKQQRQATSMSDQLVMECQELLRMFGLPFVVSPGEAEAQCAWLEEQGLTQGTVTDDSDAW 690
Query: 938 LFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNA 997
LFGAR+VY+++F + Y +QD+ LGL R+KL+ ALL GSDYT G+SG+G + A
Sbjct: 691 LFGARTVYRHLFASDRRPSVYRLQDLATQLGLNRQKLVAFALLCGSDYTAGVSGVGPITA 750
Query: 998 IEVVNAFPEEDGLS---KFREWIE 1018
+EV++ F ED L FR W+E
Sbjct: 751 MEVLSEFSGEDALQLLENFRTWLE 774
>gi|156836721|ref|XP_001642408.1| hypothetical protein Kpol_298p2 [Vanderwaltozyma polyspora DSM 70294]
gi|156112928|gb|EDO14550.1| hypothetical protein Kpol_298p2 [Vanderwaltozyma polyspora DSM 70294]
Length = 1037
Score = 164 bits (416), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 119/189 (62%), Gaps = 12/189 (6%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++Q K +R+++ V+ EM QELL FG+PYI+APMEAEAQCA + L LVDG++TD
Sbjct: 758 LFEQQMKDKRDSDEVTPEMVIAVQELLSRFGIPYIVAPMEAEAQCAELLLLKLVDGIITD 817
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG +YKN+F ++KYVE Y +Q I +L L R+ +I +ALLLGSDYT G+ G+
Sbjct: 818 DSDVFLFGGAKIYKNMFQEKKYVEFYDVQSINSNLALDRKNMIDLALLLGSDYTNGVKGL 877
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAK 1052
G V ++EV+ F L +F+EW + G FD S K R K + K
Sbjct: 878 GPVLSMEVLADF---GTLERFKEWYDE------GMFDKSKQESDSKFRKDLRKKLI---K 925
Query: 1053 NSVGGVSEF 1061
N V SEF
Sbjct: 926 NEVVLSSEF 934
>gi|344305257|gb|EGW35489.1| hypothetical protein SPAPADRAFT_69718 [Spathaspora passalidarum NRRL
Y-27907]
Length = 980
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 137/235 (58%), Gaps = 13/235 (5%)
Query: 811 ASIYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEATE-KILEEEMQILDHE 869
A++ D D E++ +E +++ KA V + E +I EE++
Sbjct: 646 AAVIDYDFEKEDEDELVQQLQIEELDHEILKNQIKATHTVPISSLETRITEEQL------ 699
Query: 870 YMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGV 929
L ++ +K +R+++ V+ M + QELL+ FG+PYI APMEAEAQCA + LVDG+
Sbjct: 700 ---LQEKLQKAKRDSDEVTETMINDVQELLRRFGIPYITAPMEAEAQCAELLKIGLVDGI 756
Query: 930 VTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGI 989
+TDDSD LFG VYKN+F+ ++YVE Y DIE +GL+R+KLI +ALLLGSDYTEGI
Sbjct: 757 ITDDSDCLLFGGDHVYKNMFNQKQYVECYIKDDIEAKVGLSRDKLIELALLLGSDYTEGI 816
Query: 990 SGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDG 1044
GIG V A+E++ F + L F++W + T+ D+ S R +G
Sbjct: 817 KGIGPVLAMEILAEF---ESLEGFKDWFDDNTKTVKSNNDLNALRKSLLTRIKNG 868
>gi|146417652|ref|XP_001484794.1| hypothetical protein PGUG_02523 [Meyerozyma guilliermondii ATCC 6260]
Length = 1035
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 105/146 (71%), Gaps = 3/146 (2%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++ K +R+++ V+ M + QELL+ FG+PYI APMEAEAQCA + LVDG++TD
Sbjct: 757 LQEQYNKAKRDSDEVTETMIRDVQELLKRFGIPYITAPMEAEAQCAELMKLGLVDGIITD 816
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD FLFG + VYKN+F+ ++YVE YF+ +I +GL ++ LI +ALLLGSDYTEGI GI
Sbjct: 817 DSDCFLFGGQKVYKNMFNQKQYVECYFIDEISHKVGLDQKNLIELALLLGSDYTEGIKGI 876
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIE 1018
G V A+E++ F L+ F+ W++
Sbjct: 877 GPVMAVEILAEF---SNLTNFKNWLD 899
>gi|303607|dbj|BAA03812.1| ERCC5 [Homo sapiens]
Length = 1185
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/287 (34%), Positives = 152/287 (52%), Gaps = 33/287 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L+ + L ++++ ER A +V+ +MF E QELL++FG+PYI APMEAEAQ
Sbjct: 734 EELETLESNLLAQQNSLKAQKQQQERFAATVTGQMFLESQELLRLFGIPYIQAPMEAEAQ 793
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VY+N F+ K+VE Y D LGL R KLI
Sbjct: 794 CAVLDLTDQTSGTITDDSDIWLFGARHVYRNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 853
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYT G + G+ A+E++N FP + L KF EW P+P
Sbjct: 854 LAYLLGSDYT-GNTNCGLCTAMEILNEFPGHGLEPLLKFSEWWHEAQKNPKIRPNPHDTK 912
Query: 1023 ---------TILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
G + + K D + K + +SEF + ++ K
Sbjct: 913 VKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGSFLWGKPDLDKISEFCQRYFGWNRTKT 972
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTF----NERFAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ E +I+S+R+ +AV
Sbjct: 973 DESLFPVLKQLDA-QQTQLRIDSFFRLAQQEKEDAKRIKSQRLNRAV 1018
>gi|320580410|gb|EFW94633.1| Single-stranded DNA endonuclease [Ogataea parapolymorpha DL-1]
Length = 1011
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 102/144 (70%), Gaps = 3/144 (2%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L + KK +R+A+ V+ M + Q++L FGLPYI APMEAEAQCA + LVDG++TD
Sbjct: 711 LQESMKKQKRDADEVTVRMILDIQDMLSRFGLPYITAPMEAEAQCAELLRLGLVDGIITD 770
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD FLFG VYKN+F+++ +VE Y M+D+E+DLGL R LI +ALLLGSDYTEGI G+
Sbjct: 771 DSDCFLFGGDRVYKNMFNEKNFVECYQMEDLERDLGLDRRMLIDLALLLGSDYTEGIKGV 830
Query: 993 GIVNAIEVVNAFPEEDGLSKFREW 1016
G V A+E++ F L F+ W
Sbjct: 831 GKVAAMEILAEF---GTLESFKHW 851
>gi|443703547|gb|ELU01026.1| hypothetical protein CAPTEDRAFT_17841 [Capitella teleta]
Length = 464
Score = 164 bits (414), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 172/319 (53%), Gaps = 50/319 (15%)
Query: 864 QILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELA 923
++L+ E L + + + +R A S++ +M E QEL+++FGLPY+++PMEAEAQCA+++L
Sbjct: 96 KVLEVENTELHNTRNQQDRMATSLTEQMNIEAQELVRLFGLPYVVSPMEAEAQCAFLDLT 155
Query: 924 NLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGS 983
+ +G VTDDSD++LFG R+VYKN+F+ +++VE + +D EK L LTREKL+ MAL+ GS
Sbjct: 156 SQTNGTVTDDSDIWLFGGRNVYKNLFNSKRHVEWFRFEDFEKQLFLTREKLVNMALVCGS 215
Query: 984 DYTEGISGIGIVNAIEVVNAFPEED--GLSKFREWIESPDPTI----------LGKFDVQ 1031
DYT GI G V A+E++ FP L F++W + + L K +
Sbjct: 216 DYTPGIHNAGPVAAMEIMGEFPAPGLRSLQLFKQWWDEAQTKVKVQETKVKIKLRKLVIN 275
Query: 1032 TGASSR--------------KRRSSDGDKDVN----YAKNSVGGVSE-FDESISQFDEDK 1072
G S + S G D++ YAKN G E DES+
Sbjct: 276 EGFPSEAVVDAYMNPTVDESREDFSWGRPDLDLLRQYAKNRFGWNKEKIDESLLPV---- 331
Query: 1073 QSAEYSQNMKKIFMDKHTQLRLEAFYT--FNERFAKIRSKRIKKAVKGITGS--QSLLLM 1128
MK+I + +QLR+ F+ E K++S+R+++ + I S + L +
Sbjct: 332 --------MKQINAKQDSQLRMTQFFPSEMTES-RKLKSQRVRRVINVIRSSPNKKLRVA 382
Query: 1129 DDAGQEVSKSRKKRKNNGL 1147
AG+ SK++K + G
Sbjct: 383 PPAGK--SKTQKSKGLGGF 399
>gi|156395868|ref|XP_001637332.1| predicted protein [Nematostella vectensis]
gi|156224443|gb|EDO45269.1| predicted protein [Nematostella vectensis]
Length = 250
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 113/156 (72%), Gaps = 2/156 (1%)
Query: 861 EEMQI-LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 919
EEMQ L+ E L E+ + R + VS+EM E QELL++FG+P++++PMEAEAQCA+
Sbjct: 94 EEMQTNLNREQRTLQSERARQARASAEVSTEMLNESQELLRLFGVPFLVSPMEAEAQCAF 153
Query: 920 MELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMAL 979
+++ DG +TDDSDVFLFG R VYKNIF+ K+ E Y +DI+K L L+R K+I++A
Sbjct: 154 LDMTGQTDGTITDDSDVFLFGGRRVYKNIFNQNKHAECYTCEDIDKGLALSRSKMIKLAF 213
Query: 980 LLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
+ GSDYTEGI G+G V+A+EV++ F +DG + +E
Sbjct: 214 VTGSDYTEGIQGLGAVSAMEVLHEF-SQDGFAALKE 248
>gi|195473066|ref|XP_002088817.1| GE18773 [Drosophila yakuba]
gi|194174918|gb|EDW88529.1| GE18773 [Drosophila yakuba]
Length = 1237
Score = 163 bits (413), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 147/273 (53%), Gaps = 38/273 (13%)
Query: 796 GTSDTSIPLVK--TSGNASIYDTDIEQKSAEERTPDTYLKDSKQNTGIFATK-------- 845
GT T P + T + +D + S EE +P + SK + +F TK
Sbjct: 749 GTPKTPQPFFRKRTPKSGRKRASDANEDSDEEVSPTK--RSSKASKSLFETKEPEKEKTV 806
Query: 846 --------AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQE 897
A E + ++ T + L+E L E L E+ + +R S+S M +CQE
Sbjct: 807 DPEELIKDAAEALKSQKTSEELQEMASNLAQERKELEIERNRQDRMGMSISQRMSIDCQE 866
Query: 898 LLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVET 957
LL++FG+PYI+APMEAEAQCA++ +L G +TDDSD++LFG R+VYKN F K+V
Sbjct: 867 LLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVLE 926
Query: 958 YFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDG-------- 1009
+ + IE+ R KLI++A L+GSDYT GI GIG V A+E++ +F +D
Sbjct: 927 FRAEQIEQTFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFSGQDANGPGVCNQ 986
Query: 1010 -----LSKFREWIESPDPTILGKFDVQTGASSR 1037
L+KFR+W ++ T ++ G+S+R
Sbjct: 987 SVLQTLTKFRDWWQAHKST-----NLPPGSSAR 1014
>gi|194760687|ref|XP_001962569.1| GF15526 [Drosophila ananassae]
gi|190616266|gb|EDV31790.1| GF15526 [Drosophila ananassae]
Length = 1237
Score = 163 bits (412), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 117/187 (62%), Gaps = 13/187 (6%)
Query: 846 AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 905
A E + ++ T + L+E L E L E+ + +R S+S M +CQELL++FG+P
Sbjct: 814 AAEALKSQKTSEELQEMATNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIP 873
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 965
YI+APMEAEAQCA++ A+L G +TDDSD++LFG R+VYKN F K+V + + IE+
Sbjct: 874 YIVAPMEAEAQCAFLNAADLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRSEQIEQ 933
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF----PEEDGLS---------K 1012
R KLI++A L+GSDYT GI GIG V A+E++ +F P G+S K
Sbjct: 934 TFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFSGHDPSAQGVSNQSVLQTLIK 993
Query: 1013 FREWIES 1019
FR+W ++
Sbjct: 994 FRDWWQA 1000
>gi|195577623|ref|XP_002078668.1| GD23543 [Drosophila simulans]
gi|194190677|gb|EDX04253.1| GD23543 [Drosophila simulans]
Length = 1235
Score = 163 bits (412), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 116/187 (62%), Gaps = 13/187 (6%)
Query: 846 AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 905
A E + ++ T + L+E L E L E+ + +R S+S M +CQELL++FG+P
Sbjct: 813 AAEALKSQKTSEELQEMATNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIP 872
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 965
YI+APMEAEAQCA++ +L G +TDDSD++LFG R+VYKN F K+V + + IE+
Sbjct: 873 YIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIEQ 932
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDG-------------LSK 1012
R KLI++A L+GSDYT GI GIG V A+E++ +F +DG L K
Sbjct: 933 TFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFSGQDGNGPGICNQSVLQTLIK 992
Query: 1013 FREWIES 1019
FR+W ++
Sbjct: 993 FRDWWQA 999
>gi|312377995|gb|EFR24684.1| hypothetical protein AND_10542 [Anopheles darlingi]
Length = 1428
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 104/157 (66%), Gaps = 14/157 (8%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K R S++ +M +C ELLQ+FG+PYI+APMEAEAQCA++ L DG +TDDSD
Sbjct: 907 EKNKQNRLGVSITDQMRNDCMELLQLFGVPYIVAPMEAEAQCAFLNQIELTDGTITDDSD 966
Query: 936 VFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
++LFG + VYKN F+ +K V + ++ IE+ + R+KLI++ALL+GSDYT GI GIG V
Sbjct: 967 IWLFGGQKVYKNFFNQQKLVLEFTIEGIEQAFQMDRKKLIQLALLVGSDYTTGIHGIGAV 1026
Query: 996 NAIEVVNAFPEE--------------DGLSKFREWIE 1018
A+E++ +FP GL KFR+W +
Sbjct: 1027 TALEILASFPPTPEQPGETSELMSMLSGLRKFRDWWQ 1063
>gi|260948192|ref|XP_002618393.1| hypothetical protein CLUG_01852 [Clavispora lusitaniae ATCC 42720]
gi|238848265|gb|EEQ37729.1| hypothetical protein CLUG_01852 [Clavispora lusitaniae ATCC 42720]
Length = 1019
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 105/146 (71%), Gaps = 3/146 (2%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++ +K +R+++ V+ M + QELL+ FG+PYI APMEAEAQCA + LVDG+VTD
Sbjct: 743 LQEKLQKAKRDSDEVTETMIRDVQELLKRFGIPYITAPMEAEAQCAELFRMGLVDGIVTD 802
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD FLFG +YKN+F+ ++YVE Y +DI+ +GL ++KLI +A+LLGSDYTEGI GI
Sbjct: 803 DSDCFLFGGSRIYKNMFNQKQYVECYIAEDIKNKIGLDQDKLIELAMLLGSDYTEGIKGI 862
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIE 1018
G V A+E++ F LS F+ W +
Sbjct: 863 GPVMAMEILAEF---GTLSNFKLWFD 885
>gi|149237300|ref|XP_001524527.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452062|gb|EDK46318.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1129
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 106/146 (72%), Gaps = 3/146 (2%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++ +K +R+++ V+ M + QELL+ FG+P+I APMEAEAQCA + LVDG+VTD
Sbjct: 849 LQEKLQKAKRDSDEVTETMIYDVQELLKRFGIPFITAPMEAEAQCAELLKIGLVDGIVTD 908
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD FLFG VYKN+F+ +++VE YF DI +GL+++ LI +ALLLGSDYTEGI G+
Sbjct: 909 DSDCFLFGGDKVYKNMFNQKQFVECYFKDDIATKIGLSQDNLIELALLLGSDYTEGIKGV 968
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIE 1018
G V A+E++ F L+KF+EW +
Sbjct: 969 GPVLAMEILAEF---GSLNKFKEWFD 991
>gi|323456781|gb|EGB12647.1| hypothetical protein AURANDRAFT_4733, partial [Aureococcus
anophagefferens]
Length = 238
Score = 162 bits (410), Expect = 1e-36, Method: Composition-based stats.
Identities = 76/138 (55%), Positives = 100/138 (72%)
Query: 867 DHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
D E L E + R+A+SV+ +M + LL++ G+PY++APMEAEAQCA +E A L
Sbjct: 101 DREAASLRREMSRSSRDADSVTEDMREDTMHLLRLLGVPYVVAPMEAEAQCAALEAAGLC 160
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
+GVVTDDSD F FGAR VYKNIFDDRKYVE Y+ D +DL L R++ +ALLLG DY
Sbjct: 161 EGVVTDDSDAFCFGARRVYKNIFDDRKYVEAYYASDCARDLRLGRDEFCALALLLGGDYD 220
Query: 987 EGISGIGIVNAIEVVNAF 1004
G++G+G+VNA+EV+ AF
Sbjct: 221 NGVAGVGVVNAMEVLQAF 238
>gi|242019297|ref|XP_002430098.1| DNA excision repair protein, putative [Pediculus humanus corporis]
gi|212515179|gb|EEB17360.1| DNA excision repair protein, putative [Pediculus humanus corporis]
Length = 1052
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 106/147 (72%), Gaps = 5/147 (3%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
EQ ER+A + + +M+++ Q LL++FG+PYI+APMEAEAQCA +++ L +G +TDDSD
Sbjct: 652 EQGNQERHALNPTDQMYSDAQALLKLFGVPYIVAPMEAEAQCAALDILGLTEGTITDDSD 711
Query: 936 VFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
++LFG VYKN F+ +K+V Y +I+K+ L RE LIR+A+L+GSDYT G++GIG V
Sbjct: 712 IWLFGGTVVYKNFFNQKKHVLEYTSLNIQKNFKLNREDLIRLAMLVGSDYTLGLTGIGPV 771
Query: 996 NAIEVVNAFPEE-----DGLSKFREWI 1017
A+E++ FP +GL FR+W+
Sbjct: 772 TAMEILACFPSPTNEILEGLENFRDWL 798
>gi|395833265|ref|XP_003789660.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair protein complementing XP-G
cells [Otolemur garnettii]
Length = 1650
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 151/288 (52%), Gaps = 33/288 (11%)
Query: 861 EEMQILDHEYMY----LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
EE++ L++ + L +Q++ ER A +V ELL++FG+PY+ APMEAEAQ
Sbjct: 1199 EELETLENNLLAEQNSLKAQQQQQERVAATVXXXXXXXPXELLRLFGIPYVQAPMEAEAQ 1258
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
CA ++L + G +TDDSD++LFGAR VYKN F+ K+VE Y D LGL R KLI
Sbjct: 1259 CAILDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLIN 1318
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREWIES--------PDP---- 1022
+A LLGSDYTEGI +G V A+E++N FP + L KF EW P+P
Sbjct: 1319 LAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLEPLLKFSEWWNEAQKNMKIRPNPHDTK 1378
Query: 1023 --TILGKFDVQTGA-------SSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
L K + G + K D + K + + EF + ++ K
Sbjct: 1379 VKKKLRKLQLTPGFPNPAVADAYLKPVVDDSKGSFLWGKPDLDRIREFCQRYFGWNRTKT 1438
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFYTFNER-----FAKIRSKRIKKAV 1116
+K++ + TQLR+++F+ ++ +I+S+R+ +AV
Sbjct: 1439 DECLFPVLKQL-SAQQTQLRIDSFFRVAQQEKQDVNKRIKSQRLNRAV 1485
>gi|405117687|gb|AFR92462.1| single-stranded DNA specific endodeoxyribonuclease [Cryptococcus
neoformans var. grubii H99]
Length = 1222
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 89/119 (74%)
Query: 898 LLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVET 957
LL+ FG+PYI APMEAEAQCA + LVDG++TDDSDVFLFG +KNIF+D KYVE
Sbjct: 837 LLRHFGIPYITAPMEAEAQCAKLAQLGLVDGIITDDSDVFLFGGGQCFKNIFNDAKYVEC 896
Query: 958 YFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
+ + D+E++L LTRE+LI +A LGSDYT G+ G+G V +E++ FP E GL F+EW
Sbjct: 897 FLLADVERELMLTRERLISLAYFLGSDYTLGLPGVGPVMGLEILANFPGERGLYDFKEW 955
>gi|9930001|dbj|BAB12157.1| hypothetical protein [Macaca fascicularis]
Length = 415
Score = 162 bits (409), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/253 (37%), Positives = 135/253 (53%), Gaps = 28/253 (11%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
MF E QELL++FG+PYI APMEAEAQCA ++L + G +TDDSD++LFGAR VYKN F+
Sbjct: 1 MFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGARHVYKNFFN 60
Query: 951 DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEE--D 1008
K+VE Y D LGL R KLI +A LLGSDYTEGI +G V A+E++N FP +
Sbjct: 61 KNKFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTVGCVTAMEILNEFPGHGLE 120
Query: 1009 GLSKFREWIE--------SPDP------TILGKFDVQTGA-------SSRKRRSSDGDKD 1047
L KF EW P+P L + G + K D
Sbjct: 121 PLLKFSEWWHEAQKNPKIRPNPHDTKVKKKLRTLQLTPGFPNPAVAEAYLKPVVDDSKGS 180
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAFYTF----NER 1103
+ K + + EF + ++ K +K++ + TQLR+++F+ E
Sbjct: 181 FLWGKPDLEKIREFCQRYFGWNRTKTDESLFPVLKQL-DAQQTQLRIDSFFRLAQQEKED 239
Query: 1104 FAKIRSKRIKKAV 1116
+I+S+R+ +AV
Sbjct: 240 AKRIKSQRLNRAV 252
>gi|397601505|gb|EJK57927.1| hypothetical protein THAOC_21987, partial [Thalassiosira oceanica]
Length = 268
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 148/264 (56%), Gaps = 49/264 (18%)
Query: 901 MFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFM 960
+ G+P++ +P EAEAQCA +E LVDGVVT+DSD+F+FG + VYKN FD++K+VE Y+
Sbjct: 1 LCGIPWVESPSEAEAQCAALERLGLVDGVVTEDSDIFVFGGQKVYKNFFDEQKFVEAYYA 60
Query: 961 QDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPE--------EDGLSK 1012
+DIE++LGL +++L+ +A+LLG DYT+G+ G+GIVN +EV+ AFP GLS+
Sbjct: 61 RDIERELGLDKDRLVALAMLLGGDYTDGVRGVGIVNGMEVLRAFPPAADGVEGVHGGLSR 120
Query: 1013 FREWIES-----------PDPTILGKFDVQTGASSRKRRSSDGD---------------- 1045
FR+W++ P+ GK S+R R ++ D
Sbjct: 121 FRDWMDGINDVLPDDATPPEVAFHGKH-----RSARTRWAAPADFPSRGIITAYLKPAVD 175
Query: 1046 ---KDVNYAKNSVGGVSEF-DESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAF---Y 1098
+A+ + + F +S+ E +++A + K+ TQ RLE++ Y
Sbjct: 176 TSGTRFTWARPDLDALQRFCADSLGW--EREETARVVGPVLKVLESTSTQTRLESYFMRY 233
Query: 1099 TFNERFAKIRSKRIKKAVKGITGS 1122
N F K++SKR++ +K I G+
Sbjct: 234 EDNVTFGKVKSKRLQDVLKDIKGN 257
>gi|50302949|ref|XP_451412.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640543|emb|CAH03000.1| KLLA0A09427p [Kluyveromyces lactis]
Length = 1011
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 106/159 (66%), Gaps = 9/159 (5%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++QKK +R+A+ V+ EM E Q LL FG+PYI APMEAEAQCA + LVDGV+TD
Sbjct: 732 LFEQQKKDKRDADEVTIEMIHEIQSLLSRFGIPYITAPMEAEAQCATLLQLKLVDGVITD 791
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG VYKN+F ++ YVE Y + ++ LGL R+KLI++A LLGSDYT G+ GI
Sbjct: 792 DSDVFLFGGTHVYKNMFQEKNYVEYYSLDLFDQKLGLDRDKLIQLAQLLGSDYTPGLRGI 851
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQ 1031
G V +E++ F L +F +W G+FD Q
Sbjct: 852 GPVMGVEILAEF---GSLKEFAKWYNE------GQFDKQ 881
>gi|354547816|emb|CCE44551.1| hypothetical protein CPAR2_403540 [Candida parapsilosis]
Length = 994
Score = 161 bits (408), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 102/146 (69%), Gaps = 3/146 (2%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++ K +R+++ V+ M + QELL+ FG+PYI APMEAEAQCA + LVDG++TD
Sbjct: 714 LQEKLHKAKRDSDEVTENMIGDVQELLKRFGIPYITAPMEAEAQCAELYKIGLVDGIITD 773
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD FLFG +YKN+F +++VE Y DIE +GL+RE LI +A+LLGSDYTEGI GI
Sbjct: 774 DSDCFLFGGDRIYKNMFSQKQFVECYLKNDIEDKIGLSRENLIELAILLGSDYTEGIKGI 833
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIE 1018
G V A+E++ F L F++W +
Sbjct: 834 GPVLAVEILAEF---GSLQGFKKWFD 856
>gi|195339243|ref|XP_002036229.1| GM16947 [Drosophila sechellia]
gi|194130109|gb|EDW52152.1| GM16947 [Drosophila sechellia]
Length = 1108
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 115/187 (61%), Gaps = 13/187 (6%)
Query: 846 AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 905
A E + ++ T + L+E L E L E+ + +R S+S M +CQELL++FG+P
Sbjct: 686 AAEALKSQKTSEELQEMATNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIP 745
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 965
YI+APMEAEAQCA++ +L G +TDDSD++LFG R+VYKN F K+V + + IE+
Sbjct: 746 YIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIEQ 805
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDG-------------LSK 1012
R KLI++A L+GSDYT GI GIG V A+E++ +F +D L K
Sbjct: 806 TFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFSGQDANGPGICNQSVLQTLIK 865
Query: 1013 FREWIES 1019
FR+W ++
Sbjct: 866 FRDWWQA 872
>gi|150865308|ref|XP_001384465.2| hypothetical protein PICST_35911 [Scheffersomyces stipitis CBS 6054]
gi|149386564|gb|ABN66436.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 992
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 101/146 (69%), Gaps = 3/146 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K +R+++ V+ M + QELL+ FG+PYI APMEAEAQCA + LVDG++TDDSD FL
Sbjct: 716 KSKRDSDEVTQNMITDVQELLRRFGIPYITAPMEAEAQCAELVKIGLVDGIITDDSDCFL 775
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
FG VYKN+F+ ++YVE Y D+ +GLTR+ LI +ALLLGSDYTEGI GIG V A+
Sbjct: 776 FGGTKVYKNMFNQKQYVECYSQDDVVDKIGLTRKNLIELALLLGSDYTEGIKGIGPVLAM 835
Query: 999 EVVNAFPEEDGLSKFREWIESPDPTI 1024
E++ F L F++W + T+
Sbjct: 836 EILAEF---GSLKNFKKWFDEKTKTV 858
>gi|196004776|ref|XP_002112255.1| hypothetical protein TRIADDRAFT_23638 [Trichoplax adhaerens]
gi|190586154|gb|EDV26222.1| hypothetical protein TRIADDRAFT_23638 [Trichoplax adhaerens]
Length = 247
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 107/143 (74%), Gaps = 1/143 (0%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L E K+ ER A SVS+EM++ECQELL +FG+PYI++PMEAEAQCA ++ N DG +TD
Sbjct: 105 LIQEHKRQERMAASVSNEMYSECQELLSLFGIPYIVSPMEAEAQCAVLDFTNQTDGTITD 164
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD+FLFG R++Y+ +F + K E Y Q I++ +GL R+K+I +A LLGSDYT+GI +
Sbjct: 165 DSDIFLFGGRNIYRYVFRESKLAEFYDSQRIQRLMGLDRKKMITLAYLLGSDYTDGIKNV 224
Query: 993 GIVNAIEVVNAFPEE-DGLSKFR 1014
GIV A+E+++ F ++ GL K +
Sbjct: 225 GIVMAMELLSTFGDDLTGLQKIK 247
>gi|254581574|ref|XP_002496772.1| ZYRO0D07788p [Zygosaccharomyces rouxii]
gi|238939664|emb|CAR27839.1| ZYRO0D07788p [Zygosaccharomyces rouxii]
Length = 1030
Score = 161 bits (407), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 109/155 (70%), Gaps = 5/155 (3%)
Query: 864 QILDHEYMY--LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYME 921
+++D+ +M L ++Q K +R+++ V+++M + Q+LL FG+PYI APMEAEAQCA +
Sbjct: 741 RVVDNAFMEDELYEQQTKDKRDSDEVTADMITDVQDLLSRFGVPYITAPMEAEAQCATLM 800
Query: 922 LANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLL 981
LVDGV+TDDSDVFLFG VYKN+F +R YVE Y + I K+LGL R +I +A LL
Sbjct: 801 RDRLVDGVITDDSDVFLFGGNKVYKNMFSERNYVEYYDAESIYKNLGLDRNGMIELAQLL 860
Query: 982 GSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
GSDYT GI G+G V+ +EV+ F L +FR+W
Sbjct: 861 GSDYTNGIKGMGPVSGMEVIAEF---GSLEEFRKW 892
>gi|170036109|ref|XP_001845908.1| DNA-repair protein complementing XP-G cells [Culex quinquefasciatus]
gi|167878599|gb|EDS41982.1| DNA-repair protein complementing XP-G cells [Culex quinquefasciatus]
Length = 1217
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 106/158 (67%), Gaps = 14/158 (8%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L E+ + R S++ +M +C +LL++FG+P+I+APMEAEAQCA++ L DG +TD
Sbjct: 818 LEKEKNRQARLGMSITEQMQQDCMDLLKLFGVPFIVAPMEAEAQCAFLNQIELTDGTITD 877
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFG ++VYKN F+ +K V + ++ IE+ + R+KLI++ALL+GSDYT GISGI
Sbjct: 878 DSDIWLFGGKTVYKNFFNQQKLVMEFTIEGIERAFQMDRKKLIQLALLVGSDYTTGISGI 937
Query: 993 GIVNAIEVVNAFPEE--------------DGLSKFREW 1016
G V A+EV+ +FP GL KFR+W
Sbjct: 938 GAVTALEVLASFPPTPQKDGETTEMMSLLSGLRKFRDW 975
>gi|78706854|ref|NP_001027232.1| mutagen-sensitive 201, isoform A [Drosophila melanogaster]
gi|10728671|gb|AAG22424.1| mutagen-sensitive 201, isoform A [Drosophila melanogaster]
Length = 1257
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 115/187 (61%), Gaps = 13/187 (6%)
Query: 846 AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 905
A E + ++ T + L+E L E L E+ + +R S+S M +CQELL++FG+P
Sbjct: 835 AAEALKSQKTSEELQELATNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIP 894
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 965
YI+APMEAEAQCA++ +L G +TDDSD++LFG R+VYKN F K+V + + IE+
Sbjct: 895 YIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIEQ 954
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDG-------------LSK 1012
R KLI++A L+GSDYT GI GIG V A+E++ +F +D L K
Sbjct: 955 TFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFSGQDANGPGICNQSVLQTLIK 1014
Query: 1013 FREWIES 1019
FR+W ++
Sbjct: 1015 FRDWWQA 1021
>gi|78706850|ref|NP_001027230.1| mutagen-sensitive 201, isoform C [Drosophila melanogaster]
gi|78706852|ref|NP_001027231.1| mutagen-sensitive 201, isoform B [Drosophila melanogaster]
gi|5051952|gb|AAD38375.1|AF144092_1 nucleotide excision repair protein MUS201 [Drosophila melanogaster]
gi|7297419|gb|AAF52678.1| mutagen-sensitive 201, isoform B [Drosophila melanogaster]
gi|28380312|gb|AAO41169.1| mutagen-sensitive 201, isoform C [Drosophila melanogaster]
Length = 1236
Score = 160 bits (406), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 115/187 (61%), Gaps = 13/187 (6%)
Query: 846 AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 905
A E + ++ T + L+E L E L E+ + +R S+S M +CQELL++FG+P
Sbjct: 814 AAEALKSQKTSEELQELATNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIP 873
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 965
YI+APMEAEAQCA++ +L G +TDDSD++LFG R+VYKN F K+V + + IE+
Sbjct: 874 YIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIEQ 933
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDG-------------LSK 1012
R KLI++A L+GSDYT GI GIG V A+E++ +F +D L K
Sbjct: 934 TFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFSGQDANGPGICNQSVLQTLIK 993
Query: 1013 FREWIES 1019
FR+W ++
Sbjct: 994 FRDWWQA 1000
>gi|367016309|ref|XP_003682653.1| hypothetical protein TDEL_0G00750 [Torulaspora delbrueckii]
gi|359750316|emb|CCE93442.1| hypothetical protein TDEL_0G00750 [Torulaspora delbrueckii]
Length = 1012
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 119/177 (67%), Gaps = 11/177 (6%)
Query: 864 QILDHEYMY--LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYME 921
+I+D+ ++ L ++Q K +R+++ V+++M E Q+LL FG+P+I APMEAEAQCA +
Sbjct: 723 RIVDNAFVEDELFEQQMKDKRDSDEVTTDMIVEVQDLLSRFGIPFITAPMEAEAQCAELL 782
Query: 922 LANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLL 981
LVDG++TDDSDVFLFG VYKN+F ++ YVE Y Q I+++LGL R+ +I +A LL
Sbjct: 783 GLKLVDGIITDDSDVFLFGGSRVYKNMFHEKNYVEFYDYQSIKQNLGLDRDTMIELAQLL 842
Query: 982 GSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK 1038
GSDYT GI G+G V+++EV+ F L KFR+W G+FD + + K
Sbjct: 843 GSDYTNGIKGMGPVSSMEVLAEF---GNLIKFRDWYNE------GQFDTKKQQAENK 890
>gi|5712619|gb|AAD47568.1|AF125578_1 DNA repair endonuclease [Drosophila melanogaster]
Length = 1236
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 114/187 (60%), Gaps = 13/187 (6%)
Query: 846 AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 905
A E + ++ T L+E L E L E+ + +R S+S M +CQELL++FG+P
Sbjct: 814 AAEALKSQKTSGELQEMATNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIP 873
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 965
YI+APMEAEAQCA++ +L G +TDDSD++LFG R+VYKN F K+V + + IE+
Sbjct: 874 YIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIEQ 933
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDG-------------LSK 1012
R KLI++A L+GSDYT GI GIG V A+E++ +F +D L K
Sbjct: 934 TFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFSGQDANGPGICNQSVLQTLIK 993
Query: 1013 FREWIES 1019
FR+W ++
Sbjct: 994 FRDWWQA 1000
>gi|401625605|gb|EJS43605.1| rad2p [Saccharomyces arboricola H-6]
Length = 1034
Score = 160 bits (404), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 115/177 (64%), Gaps = 11/177 (6%)
Query: 855 TEKILEEEMQILDHEYMY--LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPME 912
T + +E I D+ +M L ++Q K +R+++ V+ EM E QELL FG+PY+ APME
Sbjct: 736 TTLVHSDERNIADNAFMEDELFEQQMKDKRDSDEVTIEMIKEVQELLSRFGIPYVTAPME 795
Query: 913 AEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTRE 972
AEAQCA + LVDG++TDDSDVFLFG VYKN+F ++ YVE Y + I K LGL R+
Sbjct: 796 AEAQCAELLQLKLVDGIITDDSDVFLFGGTKVYKNMFHEKNYVEFYDAESILKLLGLDRK 855
Query: 973 KLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFD 1029
+I +A LLGSDYT G+ G+G V++IEV+ F L F++W + G+FD
Sbjct: 856 NMIELAQLLGSDYTNGLKGMGPVSSIEVIAEF---GSLKNFKDWYNN------GQFD 903
>gi|5758316|gb|AAD50780.1|AF162793_1 XPG variant [Drosophila melanogaster]
Length = 1257
Score = 160 bits (404), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 114/187 (60%), Gaps = 13/187 (6%)
Query: 846 AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 905
A E + ++ T + L+E L E L E+ + +R S+S M +CQELL++FG+P
Sbjct: 835 AAEALKSQKTSEELQELATNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIP 894
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 965
YI+APMEAEAQCA++ +L G +TDDSD++LFG R+VYKN F K+V + + IE+
Sbjct: 895 YIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIEQ 954
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDG-------------LSK 1012
R KLI++A L+GSDYT GI GIG V A+E++ +F D L K
Sbjct: 955 TFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFSGRDANGPGICNQSVLQTLIK 1014
Query: 1013 FREWIES 1019
FR+W ++
Sbjct: 1015 FRDWWQA 1021
>gi|5758314|gb|AAD50779.1|AF162792_1 XPG [Drosophila melanogaster]
Length = 1236
Score = 160 bits (404), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 114/187 (60%), Gaps = 13/187 (6%)
Query: 846 AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 905
A E + ++ T + L+E L E L E+ + +R S+S M +CQELL++FG+P
Sbjct: 814 AAEALKSQKTSEELQELATNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIP 873
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 965
YI+APMEAEAQCA++ +L G +TDDSD++LFG R+VYKN F K+V + + IE+
Sbjct: 874 YIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIEQ 933
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDG-------------LSK 1012
R KLI++A L+GSDYT GI GIG V A+E++ +F D L K
Sbjct: 934 TFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFSGRDANGPGICNQSVLQTLIK 993
Query: 1013 FREWIES 1019
FR+W ++
Sbjct: 994 FRDWWQA 1000
>gi|194863176|ref|XP_001970313.1| GG10553 [Drosophila erecta]
gi|190662180|gb|EDV59372.1| GG10553 [Drosophila erecta]
Length = 1237
Score = 160 bits (404), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 115/187 (61%), Gaps = 13/187 (6%)
Query: 846 AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 905
A E + ++ T + L+E L E L E+ + +R S+S M +CQELL++FG+P
Sbjct: 815 AAEALKSQKTSEELQEMATNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIP 874
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 965
YI+APMEAEAQCA++ +L G +TDDSD++LFG R+VYKN F K+V + + IE+
Sbjct: 875 YIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRAEQIEQ 934
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDG-------------LSK 1012
R KLI++A L+GSDYT GI GIG V A+E++ +F +D L +
Sbjct: 935 TFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFSGQDANGSGVCNQSVLQTLVR 994
Query: 1013 FREWIES 1019
FR+W ++
Sbjct: 995 FRDWWQA 1001
>gi|365983062|ref|XP_003668364.1| hypothetical protein NDAI_0B00870 [Naumovozyma dairenensis CBS 421]
gi|343767131|emb|CCD23121.1| hypothetical protein NDAI_0B00870 [Naumovozyma dairenensis CBS 421]
Length = 1021
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 109/156 (69%), Gaps = 5/156 (3%)
Query: 865 ILDHEYMY--LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL 922
++D +M L ++Q K +R+++ V+ +M + Q+LL FG+P+I+APMEAEAQCA +
Sbjct: 732 LIDKAFMEDELYEQQMKDKRDSDEVTPDMVQDVQDLLSRFGIPFIVAPMEAEAQCAELLH 791
Query: 923 ANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLG 982
NLVDG+VTDDSDVFLFG VYKN+F ++ YVE Y I +++GL R +I MA LLG
Sbjct: 792 LNLVDGIVTDDSDVFLFGGSKVYKNMFHEKNYVEFYDSASILRNIGLDRINMIEMAQLLG 851
Query: 983 SDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIE 1018
SDYT G+ G+G V+++E++ F L KF+EW E
Sbjct: 852 SDYTNGVKGMGPVSSLEIIAEF---GNLRKFKEWYE 884
>gi|151943533|gb|EDN61844.1| radiation sensitive protein [Saccharomyces cerevisiae YJM789]
Length = 1031
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 107/157 (68%), Gaps = 9/157 (5%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++Q K +R+++ V+ +M E QELL FG+PYI APMEAEAQCA + NLVDG++TD
Sbjct: 753 LFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGIITD 812
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG +YKN+F ++ YVE Y + I K LGL R+ +I +A LLGSDYT G+ G+
Sbjct: 813 DSDVFLFGGTKIYKNMFHEKNYVEFYDAESILKLLGLDRKNMIELAQLLGSDYTNGLKGM 872
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFD 1029
G V++IEV+ F L F++W + G+FD
Sbjct: 873 GPVSSIEVIAEF---GNLKNFKDWYNN------GQFD 900
>gi|349578461|dbj|GAA23627.1| K7_Rad2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1031
Score = 159 bits (403), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 107/157 (68%), Gaps = 9/157 (5%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++Q K +R+++ V+ +M E QELL FG+PYI APMEAEAQCA + NLVDG++TD
Sbjct: 753 LFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGIITD 812
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG +YKN+F ++ YVE Y + I K LGL R+ +I +A LLGSDYT G+ G+
Sbjct: 813 DSDVFLFGGTKIYKNMFHEKNYVEFYDAESILKLLGLDRKNMIELAQLLGSDYTNGLKGM 872
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFD 1029
G V++IEV+ F L F++W + G+FD
Sbjct: 873 GPVSSIEVIAEF---GNLKNFKDWYNN------GQFD 900
>gi|256272689|gb|EEU07666.1| Rad2p [Saccharomyces cerevisiae JAY291]
Length = 1031
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 107/157 (68%), Gaps = 9/157 (5%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++Q K +R+++ V+ +M E QELL FG+PYI APMEAEAQCA + NLVDG++TD
Sbjct: 753 LFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGIITD 812
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG +YKN+F ++ YVE Y + I K LGL R+ +I +A LLGSDYT G+ G+
Sbjct: 813 DSDVFLFGGTKIYKNMFHEKNYVEFYDAESILKLLGLDRKNMIELAQLLGSDYTNGLKGM 872
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFD 1029
G V++IEV+ F L F++W + G+FD
Sbjct: 873 GPVSSIEVIAEF---GNLKNFKDWYNN------GQFD 900
>gi|323354903|gb|EGA86736.1| Rad2p [Saccharomyces cerevisiae VL3]
Length = 998
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 107/157 (68%), Gaps = 9/157 (5%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++Q K +R+++ V+ +M E QELL FG+PYI APMEAEAQCA + NLVDG++TD
Sbjct: 753 LFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGIITD 812
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG +YKN+F ++ YVE Y + I K LGL R+ +I +A LLGSDYT G+ G+
Sbjct: 813 DSDVFLFGGTKIYKNMFHEKNYVEFYDAESILKLLGLDRKNMIELAQLLGSDYTNGLKGM 872
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFD 1029
G V++IEV+ F L F++W + G+FD
Sbjct: 873 GPVSSIEVIAEF---GNLKNFKDWYNN------GQFD 900
>gi|238579680|ref|XP_002389137.1| hypothetical protein MPER_11778 [Moniliophthora perniciosa FA553]
gi|215451076|gb|EEB90067.1| hypothetical protein MPER_11778 [Moniliophthora perniciosa FA553]
Length = 391
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 92/119 (77%)
Query: 898 LLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVET 957
+L++FG+PYI APMEAEAQCA + LVDG++TDDSDVF+FG + VYKN+F+ K VE
Sbjct: 2 MLRLFGIPYITAPMEAEAQCAVLVSLGLVDGIITDDSDVFVFGGQRVYKNMFNQSKTVEC 61
Query: 958 YFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
+ + D+ ++LGL + LIR+A LLGSDY EG+ G+G V A+E++ FP EDGL KF++W
Sbjct: 62 FLLSDLSRELGLDQGTLIRLAYLLGSDYVEGLPGVGPVVAMELLKEFPGEDGLHKFKDW 120
>gi|6321697|ref|NP_011774.1| Rad2p [Saccharomyces cerevisiae S288c]
gi|131811|sp|P07276.2|RAD2_YEAST RecName: Full=DNA repair protein RAD2
gi|172329|gb|AAA66928.1| RAD2 [Saccharomyces cerevisiae]
gi|1323470|emb|CAA97287.1| RAD2 [Saccharomyces cerevisiae]
gi|285812449|tpg|DAA08349.1| TPA: Rad2p [Saccharomyces cerevisiae S288c]
gi|392299514|gb|EIW10608.1| Rad2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1031
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 107/157 (68%), Gaps = 9/157 (5%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++Q K +R+++ V+ +M E QELL FG+PYI APMEAEAQCA + NLVDG++TD
Sbjct: 753 LFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGIITD 812
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG +YKN+F ++ YVE Y + I K LGL R+ +I +A LLGSDYT G+ G+
Sbjct: 813 DSDVFLFGGTKIYKNMFHEKNYVEFYDAESILKLLGLDRKNMIELAQLLGSDYTNGLKGM 872
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFD 1029
G V++IEV+ F L F++W + G+FD
Sbjct: 873 GPVSSIEVIAEF---GNLKNFKDWYNN------GQFD 900
>gi|207344901|gb|EDZ71889.1| YGR258Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1031
Score = 159 bits (403), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 107/157 (68%), Gaps = 9/157 (5%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++Q K +R+++ V+ +M E QELL FG+PYI APMEAEAQCA + NLVDG++TD
Sbjct: 753 LFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGIITD 812
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG +YKN+F ++ YVE Y + I K LGL R+ +I +A LLGSDYT G+ G+
Sbjct: 813 DSDVFLFGGTKIYKNMFHEKNYVEFYDAESILKLLGLDRKNMIELAQLLGSDYTNGLKGM 872
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFD 1029
G V++IEV+ F L F++W + G+FD
Sbjct: 873 GPVSSIEVIAEF---GNLKNFKDWYNN------GQFD 900
>gi|365765505|gb|EHN07013.1| Rad2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1031
Score = 159 bits (403), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 107/157 (68%), Gaps = 9/157 (5%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++Q K +R+++ V+ +M E QELL FG+PYI APMEAEAQCA + NLVDG++TD
Sbjct: 753 LFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGIITD 812
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG +YKN+F ++ YVE Y + I K LGL R+ +I +A LLGSDYT G+ G+
Sbjct: 813 DSDVFLFGGTKIYKNMFHEKNYVEFYDAESILKLLGLDRKNMIELAQLLGSDYTNGLKGM 872
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFD 1029
G V++IEV+ F L F++W + G+FD
Sbjct: 873 GPVSSIEVIAEF---GNLKNFKDWYNN------GQFD 900
>gi|255711770|ref|XP_002552168.1| KLTH0B08756p [Lachancea thermotolerans]
gi|238933546|emb|CAR21730.1| KLTH0B08756p [Lachancea thermotolerans CBS 6340]
Length = 1023
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 102/144 (70%), Gaps = 3/144 (2%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L D+ + +R+++ V++ M AE Q+LL FG+P++ APMEAEAQCA + + LVDG++TD
Sbjct: 742 LHDQHLRDKRDSDEVTAAMVAEVQDLLTRFGIPFMTAPMEAEAQCAELLMLGLVDGIITD 801
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD+FLFG VYKN+F ++ YVE Y+ ++K+LGL REK I +A LLGSDYT G+ +
Sbjct: 802 DSDIFLFGGDKVYKNMFQEKNYVEYYYSDLMKKELGLDREKFIELAQLLGSDYTTGVKSV 861
Query: 993 GIVNAIEVVNAFPEEDGLSKFREW 1016
G V+A+E++ F L FR W
Sbjct: 862 GPVSAMEILAEF---GNLHNFRNW 882
>gi|259146759|emb|CAY80016.1| Rad2p [Saccharomyces cerevisiae EC1118]
Length = 1031
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 107/157 (68%), Gaps = 9/157 (5%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++Q K +R+++ V+ +M E QELL FG+PYI APMEAEAQCA + NLVDG++TD
Sbjct: 753 LFEQQMKDKRDSDEVTMDMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGIITD 812
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG +YKN+F ++ YVE Y + I K LGL R+ +I +A LLGSDYT G+ G+
Sbjct: 813 DSDVFLFGGTKIYKNMFHEKNYVEFYDAESILKLLGLDRKNMIELAQLLGSDYTNGLKGM 872
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFD 1029
G V++IEV+ F L F++W + G+FD
Sbjct: 873 GPVSSIEVIAEF---GNLKDFKDWYNN------GQFD 900
>gi|332029719|gb|EGI69598.1| DNA repair protein complementing XP-G cells-like protein [Acromyrmex
echinatior]
Length = 417
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 101/145 (69%), Gaps = 5/145 (3%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K ER A ++S ++ + Q+LL++FG+PYIIAPMEAEAQCAY+E L DG +TDDSD++L
Sbjct: 28 KFERQATNISEQIKTDAQDLLRLFGIPYIIAPMEAEAQCAYLEQIKLTDGTITDDSDIWL 87
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
FG + VYKN F+ K + + DI+ L R +LI++ALL+GSDYT G++G+G V A+
Sbjct: 88 FGGQCVYKNFFNHNKRMLRFRACDIQHHFKLNRNQLIQLALLVGSDYTTGVAGVGPVTAL 147
Query: 999 EVVNAFPEE-----DGLSKFREWIE 1018
E++ AFP + GL F WI+
Sbjct: 148 EILAAFPADGDNVLHGLHNFCSWIK 172
>gi|385304582|gb|EIF48594.1| single-stranded dna cleaves single-stranded dna during nucleotide
excision repair [Dekkera bruxellensis AWRI1499]
Length = 577
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 69/135 (51%), Positives = 101/135 (74%), Gaps = 3/135 (2%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
R+++ VS+ M + Q+LL FG+P+I APMEAEAQCA + LVDG+VTDDSD FLFG
Sbjct: 357 RDSDEVSTSMILDVQDLLSRFGIPFITAPMEAEAQCAELFGLKLVDGIVTDDSDCFLFGG 416
Query: 942 RSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+YKN+F+++ +VE Y ++DI +D+GLTR+++I +AL+LGSDYT G+ G+G V A+E++
Sbjct: 417 SIIYKNMFNEKNFVECYQLEDIARDMGLTRKQMIDLALMLGSDYTSGLKGVGKVTAVEIL 476
Query: 1002 NAFPEEDGLSKFREW 1016
+ F + L FR W
Sbjct: 477 SEFGD---LVTFRNW 488
>gi|50287803|ref|XP_446331.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525638|emb|CAG59255.1| unnamed protein product [Candida glabrata]
Length = 992
Score = 159 bits (402), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 106/154 (68%), Gaps = 9/154 (5%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
+Q K +R+A+ V+ +M + QELL FG+PYI APMEAEAQCA + LVDG++TDDSD
Sbjct: 717 QQVKDKRDADEVTMDMIKDVQELLARFGIPYITAPMEAEAQCAELVNLKLVDGIITDDSD 776
Query: 936 VFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
VFLFG + VYKN+F ++ YVE Y +DI + LGLTRE +I +A LLGSDYT GI G+G V
Sbjct: 777 VFLFGGKKVYKNMFQEKNYVEYYDSEDIYQGLGLTRETMIELAQLLGSDYTTGIKGMGPV 836
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFD 1029
+++E++ F + L F+ W G+FD
Sbjct: 837 SSMEILAEFGD---LKNFKRWYNE------GQFD 861
>gi|367004070|ref|XP_003686768.1| hypothetical protein TPHA_0H01260 [Tetrapisispora phaffii CBS 4417]
gi|357525070|emb|CCE64334.1| hypothetical protein TPHA_0H01260 [Tetrapisispora phaffii CBS 4417]
Length = 1051
Score = 159 bits (401), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/144 (52%), Positives = 98/144 (68%), Gaps = 3/144 (2%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++Q K +R+++ V+ +M QELL FG+PYI+APMEAEAQCA + LVDG++TD
Sbjct: 772 LFEQQVKSKRDSDEVTQDMIKSVQELLTRFGIPYIVAPMEAEAQCAELLKLKLVDGIITD 831
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG VYKN+F ++ YVE Y + LGL R LI +ALLLGSDYT GI GI
Sbjct: 832 DSDVFLFGGSKVYKNMFHEKNYVEFYDQDKLTVQLGLERSNLIDLALLLGSDYTSGIKGI 891
Query: 993 GIVNAIEVVNAFPEEDGLSKFREW 1016
G V+ IE++ F L FR+W
Sbjct: 892 GPVSGIEIIAEF---GSLENFRDW 912
>gi|158299596|ref|XP_319693.4| AGAP008939-PA [Anopheles gambiae str. PEST]
gi|157013593|gb|EAA14799.5| AGAP008939-PA [Anopheles gambiae str. PEST]
Length = 1256
Score = 159 bits (401), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/152 (46%), Positives = 102/152 (67%), Gaps = 14/152 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R S++ +M +C ELLQ+FG+P+I+APMEAEAQCA++ ++ DG +TDDSD++L
Sbjct: 878 KQSRIGLSITEQMRRDCMELLQIFGVPFIVAPMEAEAQCAFLNQLDMTDGTITDDSDIWL 937
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
FG + VYKN F+ +K V + ++ IE+ + R+KLI++ALL+GSDYT GI GIG V A+
Sbjct: 938 FGGKKVYKNFFNQQKLVLEFTIEGIEQMFQMDRKKLIQLALLVGSDYTTGIHGIGAVTAL 997
Query: 999 EVVNAFPEE--------------DGLSKFREW 1016
E++ +FP GL KFR+W
Sbjct: 998 EILASFPPTPEQPGETSEMMSMLSGLRKFRDW 1029
>gi|366994113|ref|XP_003676821.1| hypothetical protein NCAS_0E03950 [Naumovozyma castellii CBS 4309]
gi|342302688|emb|CCC70465.1| hypothetical protein NCAS_0E03950 [Naumovozyma castellii CBS 4309]
Length = 1000
Score = 158 bits (400), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 105/157 (66%), Gaps = 9/157 (5%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L +Q K +R+++ V+ EM + QELL FG+PYI APMEAEAQCA + LVDGVVTD
Sbjct: 722 LYKQQVKEKRDSDEVTPEMIQDVQELLSRFGVPYITAPMEAEAQCAELLQLKLVDGVVTD 781
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG +YKN+F ++ YVE Y + I ++LGL RE +I +A LLGSDYT GI G+
Sbjct: 782 DSDVFLFGGSKIYKNMFHEKNYVEFYDSESILRNLGLDRENMIELAELLGSDYTNGIKGM 841
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFD 1029
G V+++EV+ F L +FR W G+FD
Sbjct: 842 GPVSSLEVLAEF---GNLKEFRNWYNE------GQFD 869
>gi|50551183|ref|XP_503065.1| YALI0D20240p [Yarrowia lipolytica]
gi|49648933|emb|CAG81257.1| YALI0D20240p [Yarrowia lipolytica CLIB122]
Length = 1115
Score = 157 bits (398), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 118/178 (66%), Gaps = 11/178 (6%)
Query: 847 IENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPY 906
+E A+ L EE++ ++H ++ + N E+++ M ECQ+LLQ+FG+P+
Sbjct: 781 LEEEQAKEMRMALMEELEQINHT------QKSRDTTNEEAITQTMVDECQQLLQLFGIPF 834
Query: 907 IIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARS---VYKNIFDDRKYVETYFMQDI 963
I AP EAEAQCA + +LVDGV+T+DSDVFLF + V+KN F+ KYVE Y +I
Sbjct: 835 ITAPTEAEAQCATLVNLDLVDGVITEDSDVFLFSSNPRMRVFKNFFNSNKYVECYKTGEI 894
Query: 964 EKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF--PEEDGLSKFREWIES 1019
E+ L L R+ L+ +ALLLGSDYT+G+ GIG V+A+E++ F P +D L +F++W ES
Sbjct: 895 EQTLNLERKDLVDLALLLGSDYTDGLPGIGPVSAMEILAEFKAPGKDTLREFKDWWES 952
>gi|344228751|gb|EGV60637.1| hypothetical protein CANTEDRAFT_132346 [Candida tenuis ATCC 10573]
Length = 960
Score = 157 bits (398), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 100/140 (71%), Gaps = 3/140 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K +R++E V+ M + QELL+ FG+P++ APMEAEAQC + LVDG+VTDDSD FL
Sbjct: 685 KQKRDSEEVTQAMINDVQELLRRFGIPFLTAPMEAEAQCVELLKLGLVDGIVTDDSDTFL 744
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
FG VYKN+F+ +++VE Y +D+ LGL++EKLI + LLLGSDYTEG+ GIG V A+
Sbjct: 745 FGGDRVYKNMFNQKQFVECYLSEDVSGKLGLSQEKLIELGLLLGSDYTEGVKGIGPVLAM 804
Query: 999 EVVNAFPEEDGLSKFREWIE 1018
E++ F L +F+EW +
Sbjct: 805 EILAEF---GSLHQFKEWFD 821
>gi|326433004|gb|EGD78574.1| xeroderma pigmentosum group G complementing factor [Salpingoeca sp.
ATCC 50818]
Length = 1980
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/159 (46%), Positives = 104/159 (65%), Gaps = 8/159 (5%)
Query: 876 EQKKLERNAES-------VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDG 928
+ K L+R A+ V+++M + Q LL++FG PY+IAP EAE+QCA +E LV G
Sbjct: 1149 QAKTLQRAAKRAASAVGDVTTDMIVDVQHLLRLFGCPYVIAPQEAESQCAQLEQQGLVSG 1208
Query: 929 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEG 988
V+TDDSDVFLFG R VY+++ +K ++ Y D+E GL R LI +A LLGSDYT G
Sbjct: 1209 VITDDSDVFLFGGRRVYRHVCSQKKDMQLYLADDLENLAGLDRSSLIDLAYLLGSDYTPG 1268
Query: 989 ISGIGIVNAIEVVNAFPEEDG-LSKFREWIESPDPTILG 1026
++GIG V A+EV++ F D L FR+W+ +PD +G
Sbjct: 1269 VAGIGPVTAVEVISEFHNADSTLHDFRDWVLNPDAPRVG 1307
>gi|195397917|ref|XP_002057574.1| GJ18024 [Drosophila virilis]
gi|194141228|gb|EDW57647.1| GJ18024 [Drosophila virilis]
Length = 1238
Score = 157 bits (397), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 106/159 (66%)
Query: 846 AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 905
A E + A+ T + LE L E L E+ + +R S+S M +CQELL++FG+P
Sbjct: 829 AAEALKAQKTAEELETMATSLAQERRELEAERNRQDRMGMSISQRMSNDCQELLRLFGIP 888
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 965
YI+APMEAEAQCA++ + +G +TDDSD++LFG R+VYKN F K+V + + IE+
Sbjct: 889 YIVAPMEAEAQCAFLNAVGITNGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRAEQIEQ 948
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
+R+KLI++A L+GSDYT GI GIG V A+E++ +F
Sbjct: 949 TFNCSRDKLIQLACLVGSDYTTGIHGIGAVTALEILASF 987
>gi|51013165|gb|AAT92876.1| YGR258C [Saccharomyces cerevisiae]
Length = 1031
Score = 157 bits (396), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 106/157 (67%), Gaps = 9/157 (5%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++Q K +R+++ V+ +M E QELL G+PYI APMEAEAQCA + NLVDG++TD
Sbjct: 753 LFEQQMKDKRDSDEVTMDMIKEVQELLSRLGIPYITAPMEAEAQCAELLQLNLVDGIITD 812
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG +YKN+F ++ YVE Y + I K LGL R+ +I +A LLGSDYT G+ G+
Sbjct: 813 DSDVFLFGGTKIYKNMFHEKNYVEFYDAESILKLLGLDRKNMIELAQLLGSDYTNGLKGM 872
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFD 1029
G V++IEV+ F L F++W + G+FD
Sbjct: 873 GPVSSIEVIAEF---GNLKNFKDWYNN------GQFD 900
>gi|195155670|ref|XP_002018724.1| GL25951 [Drosophila persimilis]
gi|194114877|gb|EDW36920.1| GL25951 [Drosophila persimilis]
Length = 1238
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 115/195 (58%), Gaps = 15/195 (7%)
Query: 846 AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 905
A E + ++ T + L+ L E L E+ + +R S+S M +CQELL++FG+P
Sbjct: 816 AAETLKSQKTSEELQSMADNLAQERKDLEIERNRQDRMGMSISQRMSTDCQELLRLFGIP 875
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 965
YI+APMEAEAQCA++ L G +TDDSD++LFG R+VYKN F K+V + + IE+
Sbjct: 876 YIVAPMEAEAQCAFLNATELTHGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRAEQIEQ 935
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF--------PEEDG-------L 1010
R KLI++A L+GSDYT GI GIG V A+E++ +F P G L
Sbjct: 936 TFNCNRGKLIQLACLVGSDYTTGIHGIGAVTAMEILASFSTTLDASSPASSGNQSVLATL 995
Query: 1011 SKFREWIESPDPTIL 1025
+FR+W ++ T L
Sbjct: 996 VRFRDWWQAHKSTSL 1010
>gi|118386483|ref|XP_001026360.1| XPG N-terminal domain containing protein [Tetrahymena thermophila]
gi|89308127|gb|EAS06115.1| XPG N-terminal domain containing protein [Tetrahymena thermophila
SB210]
Length = 1113
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 114/171 (66%), Gaps = 12/171 (7%)
Query: 855 TEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAE 914
T++ LEEE Q ++ LG E ++E++ + F + ++LL +FG+P++ AP EAE
Sbjct: 729 TDEQLEEEYQ----RFLNLG------ELDSETIQDK-FQQVRQLLLLFGVPWVEAPSEAE 777
Query: 915 AQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF-DDRKYVETYFMQDIEKDLGLTREK 973
AQCA++E LVDG++TDDSDVFLFG +++Y+ +F + YV + IEK++G+ R+K
Sbjct: 778 AQCAFLEQIKLVDGIITDDSDVFLFGGKNIYRGLFGKEADYVRYINGESIEKEMGVNRDK 837
Query: 974 LIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTI 1024
LI MAL LGSDYT GI G+GIVNA+E+ AF D L +F+ W D +
Sbjct: 838 LIYMALFLGSDYTLGIKGVGIVNAMEICTAFENIDALKRFKVWASKADVLL 888
>gi|198476637|ref|XP_002132415.1| GA25201 [Drosophila pseudoobscura pseudoobscura]
gi|198137788|gb|EDY69817.1| GA25201 [Drosophila pseudoobscura pseudoobscura]
Length = 1236
Score = 156 bits (395), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 115/195 (58%), Gaps = 15/195 (7%)
Query: 846 AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 905
A E + ++ T + L+ L E L E+ + +R S+S M +CQELL++FG+P
Sbjct: 814 AAETLKSQKTSEELQSMADNLAQERKDLEIERNRQDRMGMSISQRMSTDCQELLRLFGIP 873
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 965
YI+APMEAEAQCA++ L G +TDDSD++LFG R+VYKN F K+V + + IE+
Sbjct: 874 YIVAPMEAEAQCAFLNATELTHGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRAEQIEQ 933
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF--------PEEDG-------L 1010
R KLI++A L+GSDYT GI GIG V A+E++ +F P G L
Sbjct: 934 TFNCNRGKLIQLACLVGSDYTTGIHGIGAVTAMEILASFSTTLDASSPASSGNQSVLATL 993
Query: 1011 SKFREWIESPDPTIL 1025
+FR+W ++ T L
Sbjct: 994 VRFRDWWQAHKSTSL 1008
>gi|195116755|ref|XP_002002917.1| GI10377 [Drosophila mojavensis]
gi|193913492|gb|EDW12359.1| GI10377 [Drosophila mojavensis]
Length = 1255
Score = 156 bits (395), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 116/195 (59%), Gaps = 21/195 (10%)
Query: 846 AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 905
A E + ++ T + L+E L E L E+ + +R S+S M ++CQ+LL++FG+P
Sbjct: 822 AAEALKSQKTAEELQEMANNLAGERRELEAERNRQDRMGLSISQRMSSDCQDLLRLFGIP 881
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 965
YI+APMEAEAQCA++ + +G +TDDSD++LFG R+VYKN F K+V + + IEK
Sbjct: 882 YIVAPMEAEAQCAFLNAVGITNGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRAEQIEK 941
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF----PEED------------- 1008
R KLI++A L+GSDYT GI GIG V A+E++ +F P +
Sbjct: 942 TFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFSTSTPNTELSPNSPSSGVSMQ 1001
Query: 1009 ----GLSKFREWIES 1019
L KFREW ++
Sbjct: 1002 SVLSTLEKFREWWQA 1016
>gi|195454489|ref|XP_002074261.1| GK18419 [Drosophila willistoni]
gi|194170346|gb|EDW85247.1| GK18419 [Drosophila willistoni]
Length = 1247
Score = 155 bits (392), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 110/181 (60%), Gaps = 25/181 (13%)
Query: 861 EEMQILDHEYMYLGDEQKKLE-------RNAESVSSEMFAECQELLQMFGLPYIIAPMEA 913
EE+Q + L E+K+LE R S+S M +CQELL++FG+PYI+APMEA
Sbjct: 836 EELQTM---ATSLAQERKQLELERNRQDRMGMSISQRMSIDCQELLRLFGIPYIVAPMEA 892
Query: 914 EAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREK 973
EAQCA++ L +G +TDDSD++LFG R+VYKN F K+V + + IE+ R K
Sbjct: 893 EAQCAFLNATELTNGTITDDSDIWLFGGRTVYKNFFAQNKHVLEFRSEQIEQTFNCNRGK 952
Query: 974 LIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEE---------------DGLSKFREWIE 1018
LI++A L+GSDYT GI GIG V A+E++ +F + L++FR+W +
Sbjct: 953 LIQLACLVGSDYTTGIHGIGAVTALEILASFSTATTVPSTQSICNQTVLETLTRFRDWWQ 1012
Query: 1019 S 1019
+
Sbjct: 1013 A 1013
>gi|444316930|ref|XP_004179122.1| hypothetical protein TBLA_0B07870 [Tetrapisispora blattae CBS 6284]
gi|387512162|emb|CCH59603.1| hypothetical protein TBLA_0B07870 [Tetrapisispora blattae CBS 6284]
Length = 1155
Score = 154 bits (389), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 121/195 (62%), Gaps = 16/195 (8%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++Q K +R+++ V+++M + QELL FG+P+I APMEAEAQCA + LVDG+VTD
Sbjct: 876 LFEQQMKDKRDSDEVTTDMILDVQELLSRFGIPFITAPMEAEAQCAELINLKLVDGIVTD 935
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG VYKN+F ++ YVE Y I ++LGL RE +I + LLGSDYT GI G+
Sbjct: 936 DSDVFLFGGTKVYKNMFHEKHYVEYYDNDVIFRNLGLDREYMIELVELLGSDYTTGIKGM 995
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV--NY 1050
G V+++EV+ F L F+EW G+FD S++ + + KD+
Sbjct: 996 GPVSSMEVLAEF---GNLKNFKEWYNE------GQFD-----KSKQEKENKFQKDLRKKL 1041
Query: 1051 AKNSVGGVSEFDESI 1065
KN V ++F S+
Sbjct: 1042 VKNGVIFENDFPNSL 1056
>gi|444731111|gb|ELW71474.1| DNA repair protein complementing XP-G cells [Tupaia chinensis]
Length = 1217
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 145/271 (53%), Gaps = 35/271 (12%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ ER A +V+ +MF E Q +PYI APMEAEAQCA ++L + G +TD
Sbjct: 797 LKAQKQQQERIAATVTGQMFLESQ-------IPYIEAPMEAEAQCAVLDLTDQTAGTITD 849
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSD++LFGAR VYKN F+ K+VE Y D LGL R KLI +A LLGSDYTEGI +
Sbjct: 850 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDYTEGIPTV 909
Query: 993 GIVNAIEVVNAFPEE--DGLSKFREWIES--------PDPT------ILGKFDVQTG--- 1033
G V A+E++N FP + L KF EW + P+P L K + G
Sbjct: 910 GCVTAMEILNEFPGHGLEPLLKFSEWWQEAQKHQKLRPNPHDTKVKRKLRKLQLAPGFPN 969
Query: 1034 ---ASSRKRRSSDGDK-DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1089
A + + D K + K + + E+ ++ K +K++ + +
Sbjct: 970 PAVADAYLKPVVDASKGSFLWGKPDLDKIREYPFRYFGWNRTKTDESLFPVLKQLNV-QQ 1028
Query: 1090 TQLRLEAFYTFNER----FAKIRSKRIKKAV 1116
TQLR+++F+ ++ +I+S+R+ +AV
Sbjct: 1029 TQLRIDSFFRLAQQEDQDAKRIKSQRLNRAV 1059
>gi|401409161|ref|XP_003884029.1| putative RAD2 endonuclease [Neospora caninum Liverpool]
gi|325118446|emb|CBZ53997.1| putative RAD2 endonuclease [Neospora caninum Liverpool]
Length = 1924
Score = 153 bits (387), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 94/141 (66%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L++ +V+ M + LL+ FG+P++ AP EAEA AY NL D V++DDSD +F
Sbjct: 1420 LQQQTGNVTERMKDQVVALLRAFGVPFVTAPGEAEATAAYFTAQNLADAVISDDSDALVF 1479
Query: 940 GARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIE 999
GAR +Y+N F+++K VE Y I LGL +++LI +A+LLG DYT G+ GIGIVNA+E
Sbjct: 1480 GAREIYRNFFENKKSVEMYEASFIAHKLGLDQQQLILLAMLLGCDYTLGVKGIGIVNAVE 1539
Query: 1000 VVNAFPEEDGLSKFREWIESP 1020
V+ A+P D L FR W E+P
Sbjct: 1540 VLRAYPSLDALRAFRAWAEAP 1560
Score = 44.3 bits (103), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 191 EDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQ 250
ED+ + + +D V LPP +Q +L Q+R+ + ++R K + K FS +Q
Sbjct: 344 EDDSFVQLPLDAEIDQEVFDLLPPKVQFQILTQLRDAWLHDSRVKALQAKNNIFVFSNIQ 403
Query: 251 IQAYLKTVAFRREIDEVQ 268
+++Y+++V +++ V+
Sbjct: 404 LESYIRSVQANQQLTTVK 421
>gi|195030390|ref|XP_001988051.1| GH10954 [Drosophila grimshawi]
gi|193904051|gb|EDW02918.1| GH10954 [Drosophila grimshawi]
Length = 1183
Score = 153 bits (387), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 107/167 (64%)
Query: 838 NTGIFATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQE 897
NT A + + ++ T + LE+ L E L E+ + +R S+S M +CQE
Sbjct: 738 NTEDLIKDAADALKSQNTSEELEKMATDLAKERRELEAERNRQDRMGMSISQRMSNDCQE 797
Query: 898 LLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVET 957
LL++FG+PYI+APMEAEAQCA++ + +G +TDDSD++LFG R+VYKN F K+V
Sbjct: 798 LLRLFGIPYIVAPMEAEAQCAFLNAVEITNGTITDDSDIWLFGGRTVYKNFFAQNKHVLE 857
Query: 958 YFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
+ + IE+ R KLI++A L+GSDYT GI GIG V A+E++ +F
Sbjct: 858 FRAEQIEQTFNCNRSKLIQLACLVGSDYTTGIHGIGAVTALEILASF 904
>gi|397639140|gb|EJK73406.1| hypothetical protein THAOC_04971, partial [Thalassiosira oceanica]
Length = 269
Score = 153 bits (386), Expect = 8e-34, Method: Composition-based stats.
Identities = 92/261 (35%), Positives = 145/261 (55%), Gaps = 47/261 (18%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQD 962
G+P++ +P EAEAQCA +E LVDGVVT+DSD+F+FG + VYKN FD++K+VE Y+ +D
Sbjct: 4 GIPWVESPSEAEAQCAALERLGLVDGVVTEDSDIFVFGGQKVYKNFFDEQKFVEAYYARD 63
Query: 963 IEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPE--------EDGLSKFR 1014
IE++LGL +++L+ +A+LLG DYT+G+ G+GIVN +EV+ AFP GLS+FR
Sbjct: 64 IERELGLDKDRLVALAMLLGGDYTDGVRGVGIVNGMEVLRAFPPAADGVEGVHGGLSRFR 123
Query: 1015 EWIES-----------PDPTILGKFDVQTGASSRKRRSSDGD------------------ 1045
+W++ P+ GK S+R R ++ D
Sbjct: 124 DWMDGIGDVLPDDATPPEVAFHGKH-----RSARTRWAAPADFPSRGIITAYLRPAVDTS 178
Query: 1046 -KDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAF---YTFN 1101
+A+ + + F + E +++A + K+ TQ RLE++ Y N
Sbjct: 179 GTRFTWARPDLDALQRFCADALGW-EREETARVVGPVLKVLESTSTQTRLESYFMRYEDN 237
Query: 1102 ERFAKIRSKRIKKAVKGITGS 1122
F K++SKR++ +K I G+
Sbjct: 238 VTFGKVKSKRLQDVLKDIKGN 258
>gi|45198651|ref|NP_985680.1| AFR133Cp [Ashbya gossypii ATCC 10895]
gi|44984661|gb|AAS53504.1| AFR133Cp [Ashbya gossypii ATCC 10895]
gi|374108910|gb|AEY97816.1| FAFR133Cp [Ashbya gossypii FDAG1]
Length = 970
Score = 153 bits (386), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 100/144 (69%), Gaps = 3/144 (2%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++ K +R+A+ V+ EM + Q+LL +FG+PY+ APMEAEAQCA + L+DG++TD
Sbjct: 691 LYEQNTKDKRDADEVTPEMIRDIQQLLSIFGIPYLTAPMEAEAQCAELLRLKLIDGIITD 750
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDVFLFG V+KN+F ++ YVE Y + I +LGL R K I +A L+GSDYT GI GI
Sbjct: 751 DSDVFLFGGSKVFKNMFQEKNYVEYYNTETISAELGLDRLKFIALAQLMGSDYTNGIKGI 810
Query: 993 GIVNAIEVVNAFPEEDGLSKFREW 1016
G V+ IE++ + + L +FR W
Sbjct: 811 GPVSGIEILANY---NTLEEFRTW 831
>gi|328715848|ref|XP_001946726.2| PREDICTED: hypothetical protein LOC100169397 [Acyrthosiphon pisum]
Length = 951
Score = 152 bits (384), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 97/132 (73%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L Q+K +R A SV+ ++ +E + LL++FG+PYI APMEAEAQCA++E +G VTD
Sbjct: 645 LASLQRKSDRMASSVTQKITSEIKGLLKLFGIPYITAPMEAEAQCAFLEKIGRTEGTVTD 704
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDV+LFGA VYK+ FD++KYV+ + DI++ L+R I++A L+GSDYT GI GI
Sbjct: 705 DSDVWLFGANVVYKDFFDNQKYVKQFKSIDIKQQFALSRNSFIQLAFLVGSDYTNGIDGI 764
Query: 993 GIVNAIEVVNAF 1004
G V+AIE+++ F
Sbjct: 765 GPVSAIEILSFF 776
>gi|198423155|ref|XP_002121987.1| PREDICTED: similar to Excision repair cross-complementing rodent
repair deficiency, complementation group 5 [Ciona
intestinalis]
Length = 948
Score = 152 bits (383), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 104/153 (67%), Gaps = 2/153 (1%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
LD E L + K R A VS ECQELL++FG+P++++P EAEAQCA++++ +L
Sbjct: 598 LDAEDAALLERIKSASRAAREVSDVATMECQELLRLFGIPFVLSPQEAEAQCAFLDMNDL 657
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
G +T+DSDV+LFG ++VYK++FD ++ Y + DI+ +LGL R I +AL GSDY
Sbjct: 658 TMGTITEDSDVWLFGGKNVYKDMFDRKRDPTCYSLLDIQAELGLLRSHFINIALCSGSDY 717
Query: 986 TEGISGIGIVNAIEVVNAFPEE--DGLSKFREW 1016
TEG+ G+G V A+E++ FP E + L KF++W
Sbjct: 718 TEGLEGVGPVRALEIMKEFPGEGMESLVKFKQW 750
>gi|221508520|gb|EEE34089.1| DNA-repair protein xp-G, putative [Toxoplasma gondii VEG]
Length = 2004
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 95/141 (67%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L++ +++ M + LL+ FG+P+I AP EAEA AY+ NL D V++DDSD +F
Sbjct: 1414 LQQQTGNITERMKDQVIALLRAFGVPFITAPGEAEATAAYLTKQNLADAVISDDSDALVF 1473
Query: 940 GARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIE 999
GAR +Y+N F+++K VE Y I LGL +++LI +A+LLG DYT G+ GIGIVNA+E
Sbjct: 1474 GAREIYRNFFENKKSVEMYEASFIAHKLGLGQQQLILLAMLLGCDYTLGVKGIGIVNAVE 1533
Query: 1000 VVNAFPEEDGLSKFREWIESP 1020
V+ A+P + L FR W E+P
Sbjct: 1534 VLRAYPSLESLRAFRAWAEAP 1554
Score = 43.5 bits (101), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 191 EDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQ 250
ED+ + + +D V LPP +Q +L Q+R+ + ++R K + K FS +Q
Sbjct: 354 EDDSFVQLPLDAEIDQEVFDLLPPMVQFQILTQLRDAWLQDSRVKALQAKNNIFVFSNVQ 413
Query: 251 IQAYLKTVAFRREIDEVQ 268
+++Y+++V + + V+
Sbjct: 414 LESYIRSVQANQHLTTVK 431
>gi|237832503|ref|XP_002365549.1| RAD2 endonuclease, putative [Toxoplasma gondii ME49]
gi|211963213|gb|EEA98408.1| RAD2 endonuclease, putative [Toxoplasma gondii ME49]
Length = 2004
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 95/141 (67%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L++ +++ M + LL+ FG+P+I AP EAEA AY+ NL D V++DDSD +F
Sbjct: 1414 LQQQTGNITERMKDQVIALLRAFGVPFITAPGEAEATAAYLTKQNLADAVISDDSDALVF 1473
Query: 940 GARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIE 999
GAR +Y+N F+++K VE Y I LGL +++LI +A+LLG DYT G+ GIGIVNA+E
Sbjct: 1474 GAREIYRNFFENKKSVEMYEASFIAHKLGLGQQQLILLAMLLGCDYTLGVKGIGIVNAVE 1533
Query: 1000 VVNAFPEEDGLSKFREWIESP 1020
V+ A+P + L FR W E+P
Sbjct: 1534 VLRAYPSLESLRAFRAWAEAP 1554
Score = 43.5 bits (101), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 191 EDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQ 250
ED+ + + +D V LPP +Q +L Q+R+ + ++R K + K FS +Q
Sbjct: 354 EDDSFVQLPLDAEIDQEVFDLLPPMVQFQILTQLRDAWLQDSRVKALQAKNNIFVFSNVQ 413
Query: 251 IQAYLKTVAFRREIDEVQ 268
+++Y+++V + + V+
Sbjct: 414 LESYIRSVQANQHLTTVK 431
>gi|221487998|gb|EEE26212.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 2004
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 95/141 (67%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L++ +++ M + LL+ FG+P+I AP EAEA AY+ NL D V++DDSD +F
Sbjct: 1414 LQQQTGNITERMKDQVIALLRAFGVPFITAPGEAEATAAYLTKQNLADAVISDDSDALVF 1473
Query: 940 GARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIE 999
GAR +Y+N F+++K VE Y I LGL +++LI +A+LLG DYT G+ GIGIVNA+E
Sbjct: 1474 GAREIYRNFFENKKSVEMYEASFIAHKLGLGQQQLILLAMLLGCDYTLGVKGIGIVNAVE 1533
Query: 1000 VVNAFPEEDGLSKFREWIESP 1020
V+ A+P + L FR W E+P
Sbjct: 1534 VLRAYPSLESLRAFRAWAEAP 1554
Score = 43.5 bits (101), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 191 EDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQ 250
ED+ + + +D V LPP +Q +L Q+R+ + ++R K + K FS +Q
Sbjct: 354 EDDSFVQLPLDAEIDQEVFDLLPPMVQFQILTQLRDAWLQDSRVKALQAKNNIFVFSNVQ 413
Query: 251 IQAYLKTVAFRREIDEVQ 268
+++Y+++V + + V+
Sbjct: 414 LESYIRSVQANQHLTTVK 431
>gi|427797693|gb|JAA64298.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 856
Score = 151 bits (381), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 106/162 (65%), Gaps = 3/162 (1%)
Query: 860 EEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 919
+EE + L L E + +R+A S++ + ECQELL + G PY+++P EAEAQCA+
Sbjct: 555 DEEKRELHMREQELEQEAARQQRHAASLNDVLVKECQELLALLGQPYVVSPGEAEAQCAW 614
Query: 920 MELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMAL 979
+E L GVVTDDSD +LFGA+ +Y+++F + + M+D+ GL R+K++ AL
Sbjct: 615 LEQHGLSQGVVTDDSDAWLFGAQCIYRHLFRPDRRPMRFLMKDLASQFGLDRQKMVAFAL 674
Query: 980 LLGSDYTEGISGIGIVNAIEVVNAFPEEDGLS---KFREWIE 1018
L GSDYT G++G+G V A+EV++ F +D +S +FR W+E
Sbjct: 675 LCGSDYTTGVNGVGPVTAMEVLSEFKGDDAVSLLEEFRTWLE 716
>gi|5689765|emb|CAB52135.1| Nucleotide excision repair protein [Drosophila melanogaster]
Length = 378
Score = 151 bits (381), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 94/142 (66%), Gaps = 13/142 (9%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
M +CQELL++FG+PYI+APMEAEAQCA++ +L G +TDDSD++LFG R+VYKN F
Sbjct: 1 MSIDCQELLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFA 60
Query: 951 DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDG- 1009
K+V + + IE+ R KLI++A L+GSDYT GI GIG V A+E++ +F +D
Sbjct: 61 QNKHVMEFRAEQIEQTFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFSGQDAN 120
Query: 1010 ------------LSKFREWIES 1019
L KFR+W ++
Sbjct: 121 GPGICNQSVLQTLIKFRDWWQA 142
>gi|145546103|ref|XP_001458735.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426556|emb|CAK91338.1| unnamed protein product [Paramecium tetraurelia]
Length = 872
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 150/298 (50%), Gaps = 46/298 (15%)
Query: 882 RNAESVSS----EMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVF 937
+N +S+ S + F + ++LL +FG+P+IIAP EAEAQCAY++ LVD V+T+DSDVF
Sbjct: 548 QNLQSLDSVTMQQKFEDIRQLLALFGIPWIIAPGEAEAQCAYLQQNGLVDCVITEDSDVF 607
Query: 938 LFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNA 997
LFGA V K F+ + + Y Q I++DLGL R++LI +AL LGSDYT GI G+GIVNA
Sbjct: 608 LFGATKVLKGFFESKTSLVYYDTQYIKEDLGLNRDQLIYLALFLGSDYTLGIKGVGIVNA 667
Query: 998 IEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAK----- 1052
+E+V F + L +F W D + ++R + K NY K
Sbjct: 668 MEIVEVFDNVEALKRFTSWASKADVLLENASSHYENIPEKERIYKEFHK--NYKKYWELP 725
Query: 1053 ------NSVGGVSE--FDESISQFDEDK-----------QSAEYSQN---------MKKI 1084
+ G + DES+ QF + Q YSQ +KI
Sbjct: 726 SDFPNIEVINGYMKPRVDESLEQFTWGQPAVEKIIEFCSQQLRYSQERVEETIKIPFQKI 785
Query: 1085 FMDKHTQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKR 1142
+ K Q ++ F+ + A I S+RI + V + D + Q V + +K++
Sbjct: 786 -IQKEDQKKITDFFRVTSKIAIINSRRINQVVLNLNKP------DQSRQNVQQKKKRK 836
>gi|156045904|ref|XP_001589507.1| hypothetical protein SS1G_09228 [Sclerotinia sclerotiorum 1980]
gi|154693624|gb|EDN93362.1| hypothetical protein SS1G_09228 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1188
Score = 150 bits (380), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 88/119 (73%)
Query: 869 EYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDG 928
E L +QKK R+A+ VS M ECQ LL++FG+PYI APMEAEAQCA + LVDG
Sbjct: 866 ELKALRSQQKKDRRDADEVSHIMITECQALLRLFGIPYITAPMEAEAQCAELVHLGLVDG 925
Query: 929 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE 987
+VTDDSD+FLFG VYKN+F+ K VE Y + D+EK+L L+R++LI +A LLGSDYTE
Sbjct: 926 IVTDDSDIFLFGGTRVYKNLFNSNKLVECYLLSDLEKELSLSRDQLISIAHLLGSDYTE 984
>gi|156093896|ref|XP_001612986.1| DNA repair endonuclease [Plasmodium vivax Sal-1]
gi|148801860|gb|EDL43259.1| DNA repair endonuclease, putative [Plasmodium vivax]
Length = 1473
Score = 150 bits (378), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 102/149 (68%)
Query: 872 YLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
+L E KKL++N ++ EM + + LL MFG+PY+ +P EAEAQC+Y+ N D +++
Sbjct: 1115 HLMKEYKKLKKNNIEINEEMNEDIKILLNMFGIPYVQSPCEAEAQCSYLNCKNYCDAIIS 1174
Query: 932 DDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
DDSDV +F ++V KN F+ +K VE Y + IE LGL +++LI ++LL G DYT G+ G
Sbjct: 1175 DDSDVLVFNGKTVIKNFFNRKKTVEVYERKLIEDKLGLYQDELINLSLLCGCDYTIGVHG 1234
Query: 992 IGIVNAIEVVNAFPEEDGLSKFREWIESP 1020
+GIVNA+E++ AFP + L K +E + +P
Sbjct: 1235 VGIVNALEIIKAFPTFEDLKKLKEIVSNP 1263
>gi|390340292|ref|XP_791943.2| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Strongylocentrotus purpuratus]
Length = 1373
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 133/224 (59%), Gaps = 11/224 (4%)
Query: 795 VGTSDTSIPLVKTSGNASIYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEA 854
V TSD S + +TS ++ T Q +++ Y+++S Q I+ H
Sbjct: 768 VNTSDLSF-MTRTSLDSEWTSTPY-QVDSDDDVQRVYMQESDQEP------EIDEWHGVY 819
Query: 855 TEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAE 914
+K+ E E + L E + L E++K ++ + S++ M+A+ +E+LQ FG+PYI +P EAE
Sbjct: 820 VDKMNEMEKK-LHTERLALEKERRKQQKKSYSITDTMYADSKEMLQCFGIPYIESPQEAE 878
Query: 915 AQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKL 974
AQCA+++L N +G +TDD D++LFG R V+++ F +K E + + DIE+ L L R+KL
Sbjct: 879 AQCAFLDLTNQAEGTITDDGDIWLFGGRRVFRHFFSKKKDPEYFRVGDIERHLLLDRKKL 938
Query: 975 IRMALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREW 1016
I +A L+GSDYT GI GIG V A+E++ F L F+ W
Sbjct: 939 INLAYLVGSDYTLGIQGIGSVGAMEILAEFKGHGLKTLKDFKSW 982
>gi|391332092|ref|XP_003740472.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Metaseiulus occidentalis]
Length = 957
Score = 149 bits (376), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 112/186 (60%), Gaps = 5/186 (2%)
Query: 835 SKQNTGIFATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAE 894
S+ N G+ + KA +TE+I E + L + L +E +++R +++ M +
Sbjct: 634 SRLNNGVDSMKARPATSTMSTEQI-EARREQLQVQNTALQNEINRIQRQTSEITASMAED 692
Query: 895 CQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKY 954
C+ELL+MFG+P + AP EAEAQCA +E A LV GVVTDDSD+FLFG VYKN+F
Sbjct: 693 CEELLKMFGIPVVRAPREAEAQCAALEQAGLVQGVVTDDSDIFLFGGNVVYKNLFSQDHQ 752
Query: 955 VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDG----L 1010
E Y + IE +L L+RE LI A+L GSDYT GI +G V A E++ F L
Sbjct: 753 CEMYAAKTIESNLKLSREDLIGFAMLTGSDYTNGIENVGPVMACEIIAEFRSGKSVLKTL 812
Query: 1011 SKFREW 1016
++F++W
Sbjct: 813 TEFKKW 818
>gi|195559286|ref|XP_002077347.1| GD20054 [Drosophila simulans]
gi|194202449|gb|EDX16025.1| GD20054 [Drosophila simulans]
Length = 259
Score = 149 bits (375), Expect = 2e-32, Method: Composition-based stats.
Identities = 69/147 (46%), Positives = 97/147 (65%), Gaps = 13/147 (8%)
Query: 886 SVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVY 945
S+S M +CQE L++FG+PYI+APMEAEAQCA++ +L G +TDDSD++LFG R+VY
Sbjct: 4 SISQRMSIDCQEQLRLFGIPYIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVY 63
Query: 946 KNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFP 1005
KN F K+V + + IE+ R KLI++A L+GSDYT GI GIG V A+E++ +F
Sbjct: 64 KNFFAQNKHVMEFRAEQIEQTFNCNRGKLIQLACLVGSDYTTGIHGIGAVTALEILASFS 123
Query: 1006 EEDG-------------LSKFREWIES 1019
+DG L KFR+W ++
Sbjct: 124 GQDGNGPGICNQSVLQTLIKFRDWWQA 150
>gi|221053197|ref|XP_002257973.1| DNA repair endonuclease [Plasmodium knowlesi strain H]
gi|193807805|emb|CAQ38510.1| DNA repair endonuclease, putative [Plasmodium knowlesi strain H]
Length = 1431
Score = 148 bits (373), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 108/162 (66%)
Query: 859 LEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
L++ M+ + E L E +KL++N ++ EM + + LL MFG+PY+ +P EAEAQC+
Sbjct: 1071 LDDYMEKANKENEELVKEYRKLKKNNIEINEEMNEDIKILLNMFGIPYVQSPCEAEAQCS 1130
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMA 978
Y+ N D +++DDSDV +F ++V KN F+ +K VE Y + IE LGL +++LI ++
Sbjct: 1131 YLNCKNYCDAIISDDSDVLVFNGKTVIKNFFNKKKTVEVYERKLIEDKLGLYQDELINLS 1190
Query: 979 LLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESP 1020
LL G DYT G+ G+GIVNA+E++ AFP + L K +E + +P
Sbjct: 1191 LLCGCDYTIGVHGVGIVNALEIIKAFPTFEDLKKLKEIVSNP 1232
>gi|363752988|ref|XP_003646710.1| hypothetical protein Ecym_5112 [Eremothecium cymbalariae DBVPG#7215]
gi|356890346|gb|AET39893.1| hypothetical protein Ecym_5112 [Eremothecium cymbalariae DBVPG#7215]
Length = 988
Score = 147 bits (371), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/146 (48%), Positives = 96/146 (65%), Gaps = 9/146 (6%)
Query: 884 AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARS 943
A+ V+ EM + QELL FG+PY+ APMEAEAQCA + LVDG++TDDSD+FLFG +
Sbjct: 720 ADEVTVEMVTQIQELLTRFGIPYVTAPMEAEAQCAELLKLKLVDGIITDDSDIFLFGGSN 779
Query: 944 VYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNA 1003
VYKN+F ++ +VE Y I +LGL R+ LI +A LLGSDYT G+ G+G V+ +E++
Sbjct: 780 VYKNMFYEKAFVEYYSSDSISLNLGLNRDMLISLAELLGSDYTTGVKGVGPVSGMEILAE 839
Query: 1004 FPEEDGLSKFREWIESPDPTILGKFD 1029
F + L FR W G+FD
Sbjct: 840 FRD---LETFRNWYND------GQFD 856
>gi|124800975|ref|XP_001349570.1| DNA repair endonuclease, putative [Plasmodium falciparum 3D7]
gi|3845138|gb|AAC71842.1| DNA repair endonuclease, putative [Plasmodium falciparum 3D7]
Length = 1516
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 100/148 (67%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L E KKL++N ++ EM + + LL FG+PYI +P EAEAQC+Y+ N D +++D
Sbjct: 1193 LIKEYKKLKKNNIEINDEMNDDIKLLLNFFGIPYIQSPCEAEAQCSYLNNKNYCDAIISD 1252
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDV +F ++V KN F+ +K VE Y + IE+ LGL +E+LI ++LL G DYT G+ GI
Sbjct: 1253 DSDVLVFSGKTVIKNFFNKKKTVEVYEKKAIEEKLGLYQEELINISLLCGCDYTIGVHGI 1312
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESP 1020
GIVNA+E++ AFP + L ++ + +P
Sbjct: 1313 GIVNALEIIKAFPNFEDLKILKDIVSNP 1340
>gi|68076243|ref|XP_680041.1| DNA repair endonuclease [Plasmodium berghei strain ANKA]
gi|56500911|emb|CAH98970.1| DNA repair endonuclease, putative [Plasmodium berghei]
Length = 1262
Score = 145 bits (367), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 98/148 (66%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L E KKL+ N +++ EM + + LL FG+PYI AP EAEAQC+Y+ N D +++D
Sbjct: 921 LMKEYKKLKNNNITINEEMNEDIKLLLDFFGIPYIQAPCEAEAQCSYLNNNNYCDAIISD 980
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDV +F +++ KN F+ +K VE Y IE+ LGL ++ LI +++L G DYT G+ G+
Sbjct: 981 DSDVIVFSGKTIIKNFFNKKKTVEVYEKNLIERKLGLYQDDLINISMLCGCDYTVGVHGV 1040
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESP 1020
GIVNA+E+V AFP D L +E + +P
Sbjct: 1041 GIVNALEIVKAFPTFDDLKILKEIVSNP 1068
>gi|260825215|ref|XP_002607562.1| hypothetical protein BRAFLDRAFT_208062 [Branchiostoma floridae]
gi|229292910|gb|EEN63572.1| hypothetical protein BRAFLDRAFT_208062 [Branchiostoma floridae]
Length = 162
Score = 145 bits (365), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 103/158 (65%), Gaps = 2/158 (1%)
Query: 859 LEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
L E Q L E L +Q + E+ A S++ +M+ E QELL++FG+PY+ +P EAEAQCA
Sbjct: 5 LAEVEQDLQTERRTLQAQQARQEKLAASITEQMYVESQELLRLFGIPYVQSPTEAEAQCA 64
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMA 978
+++ + +G +TDDSDV+LFG R VYKN F ++ +E + +D+ L + R +LI A
Sbjct: 65 FLDQSKQTEGTITDDSDVWLFGGRQVYKNFFSQQRDMEVFKYKDVVSQLAMDRSRLINFA 124
Query: 979 LLLGSDYTEGISGIGIVNAIEVVNAFPEED--GLSKFR 1014
LL GSDYTEGI G+G V A+EV+ FP E L FR
Sbjct: 125 LLTGSDYTEGIQGVGKVLAMEVLQEFPGEGIAALQAFR 162
>gi|390371157|dbj|GAB65038.1| DNA repair endonuclease [Plasmodium cynomolgi strain B]
Length = 1505
Score = 144 bits (364), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/164 (42%), Positives = 109/164 (66%)
Query: 857 KILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 916
++L+ + + E L +E KKL++N ++ E+ + + LL MFG+PY+ +P EAEAQ
Sbjct: 1134 RVLDAYLDKTNKENEQLLNEYKKLKKNNIEINEEINEDIKILLNMFGIPYVQSPCEAEAQ 1193
Query: 917 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIR 976
C+Y+ N D +++DDSDV +F ++V KN F+ +K VE Y + IE LGL +++LI
Sbjct: 1194 CSYLNCKNYCDAIISDDSDVLVFNGKTVIKNFFNRKKTVEVYERKHIEDKLGLYQDELIN 1253
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESP 1020
++LL G DYT G+ G+GIVNA+E++ AFP D L K +E + +P
Sbjct: 1254 LSLLCGCDYTIGVHGVGIVNALEIIKAFPTFDDLKKLKEIVSNP 1297
>gi|82914773|ref|XP_728841.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485391|gb|EAA20406.1| XPG I-region, putative [Plasmodium yoelii yoelii]
Length = 1274
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 99/148 (66%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L E K+L+ N +++ EM + + LL +FG+PYI +P EAEAQCAY+ N D +++D
Sbjct: 911 LMKEYKRLKNNNITINEEMNEDIKLLLDLFGIPYIQSPCEAEAQCAYLNNNNYCDAIISD 970
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDV +F +++ KN F+ +K VE Y IE+ LGL ++ LI +++L G DYT G+ G+
Sbjct: 971 DSDVIVFSGKTIIKNFFNKKKTVEVYEKNLIERKLGLYQDDLINISMLCGCDYTIGVHGV 1030
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESP 1020
GIVNA+E++ AFP + L +E + +P
Sbjct: 1031 GIVNALEIIKAFPTFEDLKFLKEIVSNP 1058
>gi|390364842|ref|XP_790336.3| PREDICTED: DNA repair protein complementing XP-G cells-like
[Strongylocentrotus purpuratus]
Length = 375
Score = 144 bits (363), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 133/224 (59%), Gaps = 11/224 (4%)
Query: 795 VGTSDTSIPLVKTSGNASIYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEA 854
V TSD S + +TS ++ T Q +++ Y+++S Q I+ H
Sbjct: 17 VNTSDLSF-MTRTSLDSEWTSTPY-QVDSDDDVQRVYMQESDQEP------EIDEWHGVY 68
Query: 855 TEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAE 914
+K+ E E + L E + L E++K ++ + S++ M+A+ +E+LQ FG+PYI +P EAE
Sbjct: 69 VDKMNEMEKK-LHTERLALEKERRKQQKKSYSITDTMYADSKEMLQCFGIPYIESPQEAE 127
Query: 915 AQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKL 974
AQCA+++L N +G +TDD D++LFG R V+++ F +K E + + DIE+ L L R+KL
Sbjct: 128 AQCAFLDLTNQTEGTITDDGDIWLFGGRRVFRHFFSKKKDPEYFRVGDIERHLLLDRKKL 187
Query: 975 IRMALLLGSDYTEGISGIGIVNAIEVVNAFPEE--DGLSKFREW 1016
I +A L+GSDYT GI GIG V A+E++ F L F+ W
Sbjct: 188 INLAYLVGSDYTLGIQGIGSVGAMEILAEFKGHGLKTLKDFKSW 231
>gi|70953099|ref|XP_745672.1| DNA repair endonuclease [Plasmodium chabaudi chabaudi]
gi|56526070|emb|CAH76802.1| DNA repair endonuclease, putative [Plasmodium chabaudi chabaudi]
Length = 1281
Score = 142 bits (359), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 97/148 (65%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L E K+L+ +++ EM + + LL FG+PYI +P EAEAQC+Y+ N D +++D
Sbjct: 939 LMKEYKRLKNTNITINEEMNEDIKLLLNFFGIPYIQSPCEAEAQCSYLNNNNYCDAIISD 998
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
DSDV +F +++ KN F+ +K VE Y IE+ LGL ++ LI +++L G DYT G+ GI
Sbjct: 999 DSDVIVFSGKTIIKNFFNKKKTVEVYEKNLIERKLGLYQDDLINISMLCGCDYTVGVHGI 1058
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESP 1020
GIVNA+EVV AFP D L +E + +P
Sbjct: 1059 GIVNALEVVKAFPTFDDLKILKEIVSNP 1086
>gi|47201249|emb|CAF87424.1| unnamed protein product [Tetraodon nigroviridis]
Length = 175
Score = 142 bits (358), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 83/109 (76%)
Query: 896 QELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYV 955
+ELL++FG+P++IAPMEAEAQCA ++ A+ G +TDDSDV+LFG R VYKN F KYV
Sbjct: 56 EELLRLFGVPFLIAPMEAEAQCAALDRADQTHGTITDDSDVWLFGGRHVYKNFFSQNKYV 115
Query: 956 ETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
E + D++ LGL R KLI +A LLGSDYTEG++G+G V +EV+N F
Sbjct: 116 EYFQYSDLQNALGLDRTKLINLAYLLGSDYTEGVAGVGYVTGMEVLNEF 164
>gi|324501186|gb|ADY40530.1| DNA repair protein RAD2 [Ascaris suum]
Length = 947
Score = 141 bits (355), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/187 (40%), Positives = 114/187 (60%), Gaps = 24/187 (12%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
LER E V + ECQELL++ G+P++++P EAEAQC +E LV G+V+DDSDV+LF
Sbjct: 488 LEREQEGV----YKECQELLRLCGIPFVVSPGEAEAQCCELERLGLVQGIVSDDSDVWLF 543
Query: 940 GARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIE 999
GA +VYKN+F+ ++ V+ + + I K LGLTR + +++ALL G DYT G+ IG+V A+E
Sbjct: 544 GASTVYKNMFNQKRRVQMFSSETIHKQLGLTRWETVQIALLSGGDYTPGLDNIGVVTALE 603
Query: 1000 VVNAF--PEEDG----------LSKFREWI----ESPDPTILGKFDVQTGASS----RKR 1039
+++ F P ED L + +W+ ES + +SS +KR
Sbjct: 604 LISEFALPSEDNCDEEAQAFAVLQRISDWLNGREESRNKEQQSTLSTDEHSSSTSKGQKR 663
Query: 1040 RSSDGDK 1046
RS +G+K
Sbjct: 664 RSKEGNK 670
>gi|399217224|emb|CCF73911.1| unnamed protein product [Babesia microti strain RI]
Length = 895
Score = 140 bits (354), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 91/137 (66%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
R + ++ E F LL++F +P I AP EAEAQCA + + V GV++DDSD +F
Sbjct: 598 FNRYPKLLNYEEFDNICTLLKLFKIPIIFAPSEAEAQCAQLNIEQSVYGVISDDSDTLVF 657
Query: 940 GARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIE 999
GA V KN F+ ++ +E Y Q+I++ LGLTREKL +ALL G DYT G+ GIGIVNA+E
Sbjct: 658 GAIRVVKNFFNKQRNLELYQSQNIKQTLGLTREKLALIALLCGCDYTSGVKGIGIVNALE 717
Query: 1000 VVNAFPEEDGLSKFREW 1016
++ A+P D L FR+W
Sbjct: 718 IIEAYPTFDDLYHFRDW 734
>gi|424513647|emb|CCO66269.1| DNA excision repair protein Rad2 [Bathycoccus prasinos]
Length = 1311
Score = 139 bits (351), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 132/215 (61%), Gaps = 21/215 (9%)
Query: 837 QNTGIFATKAIENVHAEATEKI---LEEEMQILDHEYMYLGDEQKKLER-NAESVSSEMF 892
Q+ +FA A E E +KI +EE + E L +++KK ++ E + +M+
Sbjct: 820 QDDDLFANAAKEMEDHERRKKINTMIEEN----EKERQVLEEKRKKAQKIYGEQPTPQMY 875
Query: 893 AECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDR 952
E QELL + G+PY++AP EAEA+CA++ VDGV T+DSDVFLFGA V++N F++
Sbjct: 876 REVQELLMLLGIPYVVAPEEAEAECAHLNRTGKVDGVFTNDSDVFLFGATLVFRNAFENT 935
Query: 953 KYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEED---- 1008
K ++ Y IEK LGL RE++I++A+LLGSDYT GI GIGIVNA+EV+ F + D
Sbjct: 936 KAIQMYKSSRIEKQLGLNRERMIQLAMLLGSDYTVGIDGIGIVNAMEVLAGFSDADKENG 995
Query: 1009 -----GLSKFREWIESPDPTILGKFDVQTGASSRK 1038
GL +F++W E+ ++ G GA RK
Sbjct: 996 AESLEGLKQFKKWTENQTLSLPG----AKGAKVRK 1026
Score = 70.5 bits (171), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 202 GNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFR 261
G +DP VL ALP SMQL+++ ++R++ + +NR ++Q V+K FS+LQI+ YL++ R
Sbjct: 215 GKIDPTVLGALPVSMQLEMMKRIRDENVGKNRSQFQAVEKDSMSFSQLQIEKYLESTKLR 274
Query: 262 REIDEVQK----AAAGRGVAGVQTSRIASEANREFIF 294
+E+D + ++G AG + +IA+ E+++
Sbjct: 275 KEMDRTMRQNGAKSSGNNNAGDVSKKIAAHDGLEYVY 311
>gi|405969706|gb|EKC34660.1| Flap endonuclease GEN-like protein 1 [Crassostrea gigas]
Length = 955
Score = 136 bits (343), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 112/194 (57%), Gaps = 7/194 (3%)
Query: 840 GIFATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELL 899
G+ IE + ++++ + + + +G +++ RN + EC E+L
Sbjct: 67 GVHLVFVIEGRAPDLKQQVMAKRQETRFPQRKAVGGQRQGGRRNFNAC----LKECCEML 122
Query: 900 QMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK--YVET 957
G+PY+ +P EAEA CA + + +VD +T+D D FL+GAR+VY+N + K +VE
Sbjct: 123 DYLGVPYVHSPGEAEATCAALNASGVVDACLTNDGDAFLYGARTVYRNFTMNTKDPHVEC 182
Query: 958 YFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
Y M D+E+ LGL+REKL+ MALLLG DY +G+ G+G+ AI+++NA P + L +F W
Sbjct: 183 YCMTDVEERLGLSREKLVAMALLLGCDYLPKGVPGVGVERAIKMMNALPSSNVLKRFETW 242
Query: 1017 IESPDPTILGKFDV 1030
P+ + +V
Sbjct: 243 SSMPESCCVDTVEV 256
>gi|290992099|ref|XP_002678672.1| predicted protein [Naegleria gruberi]
gi|284092285|gb|EFC45928.1| predicted protein [Naegleria gruberi]
Length = 985
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 108/190 (56%), Gaps = 31/190 (16%)
Query: 883 NAESVSSEMFAE----CQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
N++S ++ +F ++LL G+PY+++P EA+AQC ++ NLVD V+T+DSD+FL
Sbjct: 654 NSKSKTTNLFFALVDLAKDLLTYLGVPYLVSPSEADAQCGFLSKHNLVDAVITEDSDLFL 713
Query: 939 FGARSVYKNIFD-----DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIG 993
FGA VY+N+F D+ +E Y M +I K LG TR LI++ALLLGSDYT+G+ +G
Sbjct: 714 FGANCVYRNVFGSTRHIDKNIIEEYRMDNIFKVLGFTRTNLIQIALLLGSDYTDGVHNVG 773
Query: 994 IVNAIEVVNAF-PEE------------DGLSKFREWIESPDPTILGKFDVQTGASSRKRR 1040
V A +VV+AF PEE GL F+ W+E D ++K
Sbjct: 774 PVTATQVVDAFNPEEKELDEDNLEEVTQGLKDFKLWVED---------DTFNMGRTQKSW 824
Query: 1041 SSDGDKDVNY 1050
GD NY
Sbjct: 825 GKKGDFQFNY 834
>gi|281212257|gb|EFA86417.1| xeroderma pigmentosum group G family protein [Polysphondylium
pallidum PN500]
Length = 1515
Score = 136 bits (342), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 96/139 (69%), Gaps = 9/139 (6%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
++ +++ ++ EC +LL +FG+P+I +P EAEAQCA + L+DGVVT+DSD LFG
Sbjct: 993 KSIKTIDDDILRECHDLLSLFGIPFITSPTEAEAQCAELFALGLIDGVVTEDSDTLLFGK 1052
Query: 942 RS---VYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
S VY+++F + E Y M DIEK +G+ R+ LI +A+LLG DYT G+ GIGIVNA+
Sbjct: 1053 SSDMVVYRHLF---QQPEKYCMSDIEKTIGVNRDDLINLAMLLGCDYTAGVKGIGIVNAM 1109
Query: 999 EVVNAFPEEDGLSKFREWI 1017
E+++ F D L +F ++I
Sbjct: 1110 EIISEF---DTLEEFAKFI 1125
>gi|328865755|gb|EGG14141.1| hypothetical protein DFA_11908 [Dictyostelium fasciculatum]
Length = 1098
Score = 135 bits (339), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 105/161 (65%), Gaps = 19/161 (11%)
Query: 873 LGDEQKKLE-------RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
LG EQ +E R+ S+++++ EC ELL MFG+P+I +P EAE+QCA +
Sbjct: 761 LGLEQISVEQKISNQIRSVHSITNDILKECHELLSMFGIPFITSPTEAESQCAELYNLGF 820
Query: 926 VDGVVTDDSDVFLFGAR---SVYKNIF--DDRKYVETYFMQDIEKDLGLTREKLIRMALL 980
VDGVVTDDSD+ LF ++ +VY+N+F D +KY ++I++ +GL R+ LI +ALL
Sbjct: 821 VDGVVTDDSDILLFASQPDMAVYRNLFQHDPQKYQP----KEIKRLMGLERQDLISLALL 876
Query: 981 LGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPD 1021
LG DYT G+ GIGIVNA+E++ F + L F+++I D
Sbjct: 877 LGCDYTPGVHGIGIVNAMEILAEF---ENLQDFKKYISGLD 914
>gi|71029044|ref|XP_764165.1| DNA repair protein Rad2 [Theileria parva strain Muguga]
gi|68351119|gb|EAN31882.1| DNA repair protein rad2, putative [Theileria parva]
Length = 835
Score = 134 bits (336), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 88/125 (70%), Gaps = 1/125 (0%)
Query: 892 FAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDD 951
+ + +LL+ FG+PYI+AP EAE+QCAYM + V++DDSD +FGA+ + KN ++D
Sbjct: 528 YDDVHKLLEHFGVPYIVAPSEAESQCAYMNRSGKCYAVISDDSDSLVFGAKCLLKNFYND 587
Query: 952 RKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLS 1011
+ + E Y + I ++LG+ R++L +A++ G DYT G+ GIGIVNA+EV+ A+P D L
Sbjct: 588 KVF-ELYTLDRIRRELGIGRKQLALIAIICGCDYTTGVKGIGIVNALEVIKAYPTFDDLY 646
Query: 1012 KFREW 1016
FR+W
Sbjct: 647 DFRDW 651
>gi|312067080|ref|XP_003136574.1| hypothetical protein LOAG_00986 [Loa loa]
Length = 882
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 86/114 (75%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
++ +CQ+LL++ G+PY+IAP EAEAQC +E LV G+++DDSDV+ FGA VYKN+F+
Sbjct: 497 VYKDCQDLLRICGIPYVIAPGEAEAQCCELERLGLVHGIISDDSDVWSFGAAMVYKNMFN 556
Query: 951 DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
++ ++ Y M+ I LGL+R + +++ALL G DYT G+ G+G+V A+E+++ F
Sbjct: 557 QKRRLQMYSMETIHNQLGLSRWEAVQIALLSGGDYTSGLGGVGVVAALELISEF 610
>gi|393908823|gb|EFO27494.2| hypothetical protein LOAG_00986 [Loa loa]
Length = 880
Score = 133 bits (334), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 86/114 (75%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
++ +CQ+LL++ G+PY+IAP EAEAQC +E LV G+++DDSDV+ FGA VYKN+F+
Sbjct: 495 VYKDCQDLLRICGIPYVIAPGEAEAQCCELERLGLVHGIISDDSDVWSFGAAMVYKNMFN 554
Query: 951 DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
++ ++ Y M+ I LGL+R + +++ALL G DYT G+ G+G+V A+E+++ F
Sbjct: 555 QKRRLQMYSMETIHNQLGLSRWEAVQIALLSGGDYTSGLGGVGVVAALELISEF 608
>gi|67937671|gb|AAY83298.1| unknown [Babesia sp. WA1]
Length = 954
Score = 133 bits (334), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 98/151 (64%), Gaps = 4/151 (2%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
L H Y + + K++R ++S+ S + E+L +FG+PY+ AP EAEAQC ++ +
Sbjct: 621 LPHYYEF-RSQLYKMQRYSQSLES--LEKICEMLDLFGIPYMHAPSEAEAQCCFLNQSGE 677
Query: 926 VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
V V++DDSD FGAR + KN F+ R + E Y I+ +LGL++E+L +A++ G DY
Sbjct: 678 VYAVISDDSDTLPFGARRILKNFFNSRVF-EIYLSSRIKSELGLSQEQLALLAIICGCDY 736
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
T+G+ GIGIVNA+EV+ A+P + L FR W
Sbjct: 737 TDGVCGIGIVNALEVIKAYPTFNDLYAFRAW 767
>gi|403223884|dbj|BAM42014.1| uncharacterized protein TOT_040000390 [Theileria orientalis strain
Shintoku]
Length = 784
Score = 132 bits (333), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Query: 892 FAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDD 951
+ + Q LL++FG+PY+IAP EAE+QCAYM V++DDSD +FGAR + KN ++D
Sbjct: 478 YDDTQALLELFGVPYLIAPSEAESQCAYMNKKGDCYAVISDDSDALVFGARCLLKNFYND 537
Query: 952 RKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLS 1011
+ E Y + I K+LG+ R++L +A++ G DYT G+ GIG+VNA+EV+ A+P+ + L
Sbjct: 538 NVF-ELYTAERIRKELGIGRKQLALIAVICGCDYTNGVRGIGVVNALEVIKAYPKFEDLH 596
Query: 1012 KFREWIES 1019
+F+ W S
Sbjct: 597 EFKHWATS 604
>gi|328774021|gb|EGF84058.1| hypothetical protein BATDEDRAFT_2594, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 284
Score = 132 bits (332), Expect = 2e-27, Method: Composition-based stats.
Identities = 63/127 (49%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
Query: 879 KLERNAESVSSEMFAECQELLQ-MFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVF 937
+L++ A V+ + C LL +FG+PYI+A EAE+QCA+++ LV+G+VTDDSDVF
Sbjct: 88 QLQKRALIVNWQQRKSCVPLLLFIFGIPYIVATTEAESQCAFLQKQGLVEGIVTDDSDVF 147
Query: 938 LFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNA 997
+FG VYKN+F + VE Y M +++ LGL+REKLI +A LLGSDYT G+ GIG V +
Sbjct: 148 VFGGEVVYKNMFTQTRSVEIYTMDRLQEQLGLSREKLILLAYLLGSDYTPGLVGIGPVTS 207
Query: 998 IEVVNAF 1004
+E++N +
Sbjct: 208 VEILNEW 214
>gi|156084190|ref|XP_001609578.1| Rad2 endonuclease [Babesia bovis T2Bo]
gi|154796830|gb|EDO06010.1| Rad2 endonuclease, putative [Babesia bovis]
Length = 1002
Score = 131 bits (330), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
Query: 898 LLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVET 957
LL +FG+P+I+AP EAEAQCA++ L GV++DDSD FGA+ V+KN + + E
Sbjct: 692 LLDLFGVPFIVAPSEAEAQCAHLNNTGLCFGVISDDSDTLAFGAKRVFKNFYSGNVF-EV 750
Query: 958 YFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWI 1017
Y I +LGL R ++ +A+L G DYT G+ GIG+VNA+EV+ AFP D L +FR W
Sbjct: 751 YVADRILHELGLGRNEIALLAILCGCDYTPGVRGIGVVNALEVIKAFPTFDDLYEFRRWA 810
Query: 1018 ES 1019
S
Sbjct: 811 TS 812
Score = 48.9 bits (115), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 204 VDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRRE 263
++P LP ++ ++ Q++E M ++R Q++K + FS LQ+++YL+ V RE
Sbjct: 271 INPESYERLPADVRYQIMQQIKEAWMYDDRVNLQQMKSSLSAFSNLQVESYLRDVEINRE 330
Query: 264 IDEVQKAAAGRGV 276
I++++ + + R +
Sbjct: 331 IEKIKHSLSTRAL 343
>gi|402588539|gb|EJW82472.1| XPG domain-containing protein [Wuchereria bancrofti]
Length = 604
Score = 130 bits (328), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 86/114 (75%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
++ +CQ LL++ G+P++IAP EAEAQC +E LV G+++DDSDV+LFGA VYKN+F+
Sbjct: 470 VYKDCQNLLRICGIPFVIAPGEAEAQCCELEKLGLVQGIISDDSDVWLFGAAVVYKNMFN 529
Query: 951 DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
++ ++ Y M+ I LGL+R + I++ALL G DYT G+ G+G+V A+E+++ F
Sbjct: 530 QKRRLQMYSMESIRNQLGLSRWEAIQIALLSGGDYTNGLEGVGVVAALELISEF 583
>gi|84996925|ref|XP_953184.1| endonuclease (xp-g/RAD2 homologue) [Theileria annulata strain Ankara]
gi|65304180|emb|CAI76559.1| endonuclease (xp-g/RAD2 homologue), putative [Theileria annulata]
Length = 899
Score = 130 bits (327), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 87/128 (67%), Gaps = 1/128 (0%)
Query: 892 FAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDD 951
+ +LL FG+PYI+AP EAE+QCAYM + V++DDSD +FGA+ + KN ++D
Sbjct: 589 YENIHKLLDHFGVPYIVAPSEAESQCAYMNRSGKCYAVISDDSDSLVFGAKCLLKNFYND 648
Query: 952 RKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLS 1011
+ + E Y + I ++LG+ R++L +A++ G DYT G+ GIGIVNA+EV+ A+P + L
Sbjct: 649 KVF-ELYKLDRIRRELGIGRKQLALIAIICGCDYTNGVKGIGIVNALEVIKAYPTFEDLY 707
Query: 1012 KFREWIES 1019
FR+W S
Sbjct: 708 DFRDWATS 715
>gi|300120755|emb|CBK20997.2| unnamed protein product [Blastocystis hominis]
Length = 548
Score = 127 bits (320), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 77/101 (76%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
VS + + E+L +FG+PY+ AP EAEAQCA+++L LVDGV+++DSDVF FG +++Y+
Sbjct: 440 VSENIIMDIVEILHIFGIPYVFAPGEAEAQCAFLDLMELVDGVISNDSDVFAFGGKTMYR 499
Query: 947 NIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE 987
N F D ++VE Y ++DIEK+ GL R ++I +ALLLG DY E
Sbjct: 500 NFFVDNRFVEVYKIEDIEKERGLNRNRIIELALLLGCDYCE 540
>gi|358341292|dbj|GAA49005.1| DNA excision repair protein ERCC-5 [Clonorchis sinensis]
Length = 1013
Score = 127 bits (319), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 106/174 (60%), Gaps = 14/174 (8%)
Query: 848 ENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYI 907
+N H+ +K +E+E +L + + L D+ +L R A++ + E Q LLQ+FG+P+I
Sbjct: 563 DNQHSVFHDKWIEDEDAVLLDDDV-LRDQADRLTRQAQTTTQRCVEEAQNLLQLFGMPFI 621
Query: 908 IAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF-----DDRKYV------- 955
++P EAEAQC ++ + LVD V +DDSDV+ FGAR V +++F D + V
Sbjct: 622 VSPEEAEAQCVALQQSGLVDLVASDDSDVWPFGARLVCRHLFAGGAVDTKPKVTRKAPRV 681
Query: 956 -ETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEED 1008
Y + D+++ +GL ++R+ALL GSDYT G+ +G V A+E++N F E D
Sbjct: 682 PSQYTLDDVQRTVGLNTMNILRLALLCGSDYTPGVQNVGPVTAVEILNEFGEID 735
>gi|116180814|ref|XP_001220256.1| hypothetical protein CHGG_01035 [Chaetomium globosum CBS 148.51]
gi|88185332|gb|EAQ92800.1| hypothetical protein CHGG_01035 [Chaetomium globosum CBS 148.51]
Length = 1765
Score = 127 bits (319), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 88/158 (55%), Gaps = 20/158 (12%)
Query: 861 EEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 920
E Q + E L +QKK R+A+ V+ M ECQ LL +FG+PYI APMEAEAQCA +
Sbjct: 797 ENQQAYEQELRALRAQQKKDRRDADEVTQVMVTECQALLTLFGIPYITAPMEAEAQCAEL 856
Query: 921 ELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALL 980
NLVDG+VTDDSD FLFG VYKN+F +
Sbjct: 857 VHLNLVDGIVTDDSDTFLFGGTRVYKNMFAGNNSSPSPTSSAPTT--------------- 901
Query: 981 LGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIE 1018
+G+ G+G V A+E+++ FP ++GLS+FR+W +
Sbjct: 902 -----PKGLPGVGPVTALEILSEFPGKNGLSEFRDWWQ 934
>gi|340376739|ref|XP_003386889.1| PREDICTED: DNA repair protein complementing XP-G cells homolog
[Amphimedon queenslandica]
Length = 739
Score = 125 bits (315), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 77/107 (71%)
Query: 898 LLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVET 957
LL++FGLPY+ +P EAEAQC+ +E +L G +TDD+DVFLFG +VY+++F VE
Sbjct: 456 LLRLFGLPYLESPSEAEAQCSTLESLSLTQGTITDDNDVFLFGGMNVYRHMFTGSHDVEY 515
Query: 958 YFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
Y DIE LGL R LI +A LLG DYT+GI G+G+VNA+E+V F
Sbjct: 516 YRNADIETLLGLDRNNLIILAYLLGCDYTDGIEGVGVVNALELVQFF 562
>gi|339259208|ref|XP_003369790.1| putative DNA-repair protein [Trichinella spiralis]
gi|316966016|gb|EFV50652.1| putative DNA-repair protein [Trichinella spiralis]
Length = 859
Score = 124 bits (312), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 104/176 (59%), Gaps = 24/176 (13%)
Query: 869 EYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDG 928
++ L E + E A +V+S++ EC+ L++FG+P + + EAEAQCA++E + +G
Sbjct: 554 DFQKLESEHSRAEAGARTVTSQILDECEVFLRLFGVPIVKSLAEAEAQCAWLEQNQISEG 613
Query: 929 VVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDL-------------GLTREKLI 975
+TDDSD++LFG + VY+N+F +K V+ YF + K+L L REK I
Sbjct: 614 TITDDSDIWLFGGQHVYRNLFVKKKLVQ-YFDMNTIKELSSLINCIAHPVFSALNREKFI 672
Query: 976 RMALLLGSDYTEGISGIGIVNAIEVVNAF--------PEEDGLSKFREWIES-PDP 1022
+A+L+G DY++G+ +G+V A+E++ F P E L FR+W +S P P
Sbjct: 673 LLAMLVGCDYSQGVENLGVVTALEIIAEFNSAAEQSTPIE-TLVSFRQWFQSAPLP 727
>gi|209878979|ref|XP_002140930.1| DNA-repair protein UVH3 [Cryptosporidium muris RN66]
gi|209556536|gb|EEA06581.1| DNA-repair protein UVH3, putative [Cryptosporidium muris RN66]
Length = 1017
Score = 124 bits (311), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 111/189 (58%), Gaps = 12/189 (6%)
Query: 833 KDSKQNTGIFATKAIENVHAEATE----KILEEEMQILDHEYMYLGDEQKKLERNAESVS 888
KDS + ++ ++N H + ILEEE H+ + + ++ NAE ++
Sbjct: 688 KDSLSYNPKYTSEELDNFHKLLADDNIISILEEE-----HDKIMSKFQVQRRYTNAE-IT 741
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
E+ + + LLQ FG+P+I +P EAEAQ + + L DGV++DDSD LFGA+ VY+N
Sbjct: 742 KEIQFQVRMLLQAFGIPWIDSPGEAEAQASILTQLGLCDGVLSDDSDCILFGAKCVYRNF 801
Query: 949 FDDRKYVETYFMQDIEKDLGL-TREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEE 1007
F VE Y DIE LG+ +++ +ALLLG DYT G+SG+G VNA+E++ A+P
Sbjct: 802 FCGTT-VEKYVKVDIENFLGIKNHDQMCILALLLGCDYTVGVSGVGPVNALEILKAYPNL 860
Query: 1008 DGLSKFREW 1016
+ K ++W
Sbjct: 861 SDMEKLKQW 869
Score = 46.2 bits (108), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 184 LEEEDGDE---DEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVK 240
LEE D D M LP + +DP V +L +Q ++L+Q+R+ ++ +R +
Sbjct: 254 LEERDNDRIDGKRLMELP-LNAEIDPDVFKSLDTKVQYEILIQLRDSWLSASRANAVNAR 312
Query: 241 KAPEKFSELQIQAYLKTVAFRREIDEVQKAAA 272
FS +Q++ YL+ + +EI+ V++ A
Sbjct: 313 DNMSLFSNVQMECYLRYLKINQEIENVKRRMA 344
>gi|429329613|gb|AFZ81372.1| DNA-repair protein xp-G, putative [Babesia equi]
Length = 839
Score = 124 bits (310), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
Query: 896 QELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYV 955
Q++L++FG+PYI+AP EAE+QCA++ + V+TDDSD +FGA V KN ++ +
Sbjct: 535 QKMLKLFGIPYIVAPSEAESQCAHLNESGACYAVITDDSDALVFGANRVLKNFYNSNIF- 593
Query: 956 ETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
E Y + + LG+ R++L +A++ G DYT GI G+GI+NA+E++ A+P + L +FR+
Sbjct: 594 EVYTSERLFSQLGIGRQELALIAIICGCDYTTGIKGVGIINALEIIKAYPTFNDLYEFRK 653
Query: 1016 WIES 1019
W S
Sbjct: 654 WATS 657
>gi|395509172|ref|XP_003758878.1| PREDICTED: uncharacterized protein LOC100916082 [Sarcophilus
harrisii]
Length = 978
Score = 122 bits (305), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 95/155 (61%), Gaps = 6/155 (3%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
G Q + + S + EC +LL+ G+P++ A EAEA CAY++ VDG +TD
Sbjct: 94 FGAPQNRAHKFTRSSFKAVLKECLDLLECLGVPWVQASGEAEAMCAYLDAHGYVDGCLTD 153
Query: 933 DSDVFLFGARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGI 989
D D FL+GA++VY+N + K +V+ Y M I++DLGL R+ LI +A+LLG DY +G+
Sbjct: 154 DGDAFLYGAQTVYRNFTMNAKDPHVDCYTMSSIKRDLGLDRDTLIGLAVLLGCDYLPKGV 213
Query: 990 SGIGIVNAIEVVNAFPEEDGLSKFREWIE---SPD 1021
G+G A+++V + ++ L KF +W E SPD
Sbjct: 214 PGVGKELALKLVRSLKGQNLLQKFDQWKEESHSPD 248
>gi|449283697|gb|EMC90302.1| Flap endonuclease GEN like protein 1, partial [Columba livia]
Length = 542
Score = 119 bits (298), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 87/140 (62%), Gaps = 3/140 (2%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
R S+ M EC ELL+ G+P++ A EAEA CAY+ VDG +T+D DVFL+GA
Sbjct: 39 RTGRSLFKAMLKECLELLECLGVPWVQAAGEAEAMCAYLNAKGHVDGCITNDGDVFLYGA 98
Query: 942 RSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAI 998
+VY+N + K Y++ Y M I++ LG RE LI +A+LLG DY +G+ G+G A+
Sbjct: 99 HTVYRNFAMNAKDPYLDCYTMSSIKETLGCDRESLIGLAVLLGCDYLPKGVPGVGKEQAL 158
Query: 999 EVVNAFPEEDGLSKFREWIE 1018
++++ ++ L +F +W E
Sbjct: 159 KLIDTLQGQNLLQRFEQWKE 178
>gi|256070941|ref|XP_002571800.1| xp-G/rad2 DNA repair endonuclease family [Schistosoma mansoni]
gi|353228641|emb|CCD74812.1| putative xp-G/rad2 DNA repair endonuclease family [Schistosoma
mansoni]
Length = 991
Score = 118 bits (296), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 90/140 (64%), Gaps = 8/140 (5%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++ +L R A+S ++ +E Q+LL +FG P++++P EAEAQC ++ LVD V +D
Sbjct: 639 LREKADRLTRQAQSTTTRCISEAQDLLHLFGFPFVVSPEEAEAQCVALQRHGLVDLVASD 698
Query: 933 DSDVFLFGARSVYKNIF-----DDRKYV---ETYFMQDIEKDLGLTREKLIRMALLLGSD 984
DSDV+ FG + V +++F D+ K Y + ++++ LGLT E ++R+ LL GSD
Sbjct: 699 DSDVWPFGVKLVCRHLFGTGGGDNLKSTTNPSIYKLDEVKRKLGLTIENILRLTLLCGSD 758
Query: 985 YTEGISGIGIVNAIEVVNAF 1004
YT GI +G V AIE+++ F
Sbjct: 759 YTHGIDQVGPVTAIEILSEF 778
>gi|148540148|ref|NP_796305.3| flap endonuclease GEN homolog 1 [Mus musculus]
gi|166221585|sp|Q8BMI4.2|GEN_MOUSE RecName: Full=Flap endonuclease GEN homolog 1
gi|60334795|gb|AAH90653.1| Gen homolog 1, endonuclease (Drosophila) [Mus musculus]
gi|187957028|gb|AAI38159.1| Gen homolog 1, endonuclease (Drosophila) [Mus musculus]
gi|187957572|gb|AAI38158.1| Gen homolog 1, endonuclease (Drosophila) [Mus musculus]
Length = 908
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 89/143 (62%), Gaps = 3/143 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC E+L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLEMLECLGMPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y + I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTISSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIESP 1020
++++ F + L +F +WIE P
Sbjct: 223 LKLLQIFKGQSLLQRFNQWIEDP 245
>gi|148666016|gb|EDK98432.1| RIKEN cDNA 5830483C08 [Mus musculus]
Length = 908
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 89/143 (62%), Gaps = 3/143 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC E+L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLEMLECLGMPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y + I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTISSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIESP 1020
++++ F + L +F +WIE P
Sbjct: 223 LKLLQIFKGQSLLQRFNQWIEDP 245
>gi|26326927|dbj|BAC27207.1| unnamed protein product [Mus musculus]
Length = 908
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 89/143 (62%), Gaps = 3/143 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC E+L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLEMLECLGMPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y + I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTISSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIESP 1020
++++ F + L +F +WIE P
Sbjct: 223 LKLLQIFKGQSLLQRFNQWIEDP 245
>gi|26326997|dbj|BAC27242.1| unnamed protein product [Mus musculus]
Length = 908
Score = 117 bits (294), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 89/143 (62%), Gaps = 3/143 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC E+L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLEMLECLGMPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y + I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTISSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIESP 1020
++++ F + L +F +WIE P
Sbjct: 223 LKLLQIFKGQSLLQRFNQWIEDP 245
>gi|260796605|ref|XP_002593295.1| hypothetical protein BRAFLDRAFT_123641 [Branchiostoma floridae]
gi|229278519|gb|EEN49306.1| hypothetical protein BRAFLDRAFT_123641 [Branchiostoma floridae]
Length = 790
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 83/129 (64%), Gaps = 3/129 (2%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
+ EC LL G+P++ + EAEA CA + +LVDG +TDD D FL+GAR+VY+N+
Sbjct: 119 ILKECILLLDGLGIPHVQSKGEAEAFCALLNRESLVDGCLTDDGDAFLYGARTVYRNLTL 178
Query: 951 DRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIEVVNAFPEE 1007
D+K +V+ Y M DIE+ L L R KL+ +ALLLG DY +G+ G+G A+ V+ A
Sbjct: 179 DKKDPHVDCYQMSDIEEKLLLDRNKLVGLALLLGCDYCPKGVPGVGKELAVRVMTALETC 238
Query: 1008 DGLSKFREW 1016
D L +F+ W
Sbjct: 239 DVLERFKVW 247
>gi|74196654|dbj|BAE34428.1| unnamed protein product [Mus musculus]
Length = 739
Score = 117 bits (293), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 89/143 (62%), Gaps = 3/143 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC E+L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 38 QKTGRSHFKSVLRECLEMLECLGMPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYG 97
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y + I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 98 AQTVYRNFTMNTKDPHVDCYTISSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQA 157
Query: 998 IEVVNAFPEEDGLSKFREWIESP 1020
++++ F + L +F +WIE P
Sbjct: 158 LKLLQIFKGQSLLQRFNQWIEDP 180
>gi|449498163|ref|XP_002196947.2| PREDICTED: flap endonuclease GEN homolog 1 [Taeniopygia guttata]
Length = 617
Score = 117 bits (292), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 88/138 (63%), Gaps = 3/138 (2%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
R S+ M EC E+L+ G+P++ A EAEA CAY+ LVDG +T+D DVFL+GA
Sbjct: 104 RTGRSLFKAMLKECLEMLECLGVPWVQAAGEAEAMCAYLNAKGLVDGCLTNDGDVFLYGA 163
Query: 942 RSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAI 998
++VY+N + K ++++Y M I++ LG RE LI +A+LLG DY +G+ G+G A+
Sbjct: 164 QTVYRNFAMNAKDPHLDSYTMSSIKEKLGCDRESLIGLAVLLGCDYLPKGVPGVGKEQAL 223
Query: 999 EVVNAFPEEDGLSKFREW 1016
+++ E+ L +F +W
Sbjct: 224 KLIETLQGENLLQRFEQW 241
>gi|431911852|gb|ELK13996.1| Flap endonuclease GEN like protein 1 [Pteropus alecto]
Length = 903
Score = 117 bits (292), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Query: 872 YLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
Y E+ + ++ S + EC ELL G+P++ A EAEA CAY+ + VDG +T
Sbjct: 94 YGPSEKTRSQKTGRSYFKSVLRECLELLDCIGIPWVQAAGEAEAMCAYLNASGYVDGCLT 153
Query: 932 DDSDVFLFGARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EG 988
DD D FL+GA++VY+N K +V+ Y M I +LGL R+ L+ +A+LLG DY +G
Sbjct: 154 DDGDTFLYGAQTVYRNFAMTSKDPHVDCYTMSSIMSELGLNRDALVGLAILLGCDYLPKG 213
Query: 989 ISGIGIVNAIEVVNAFPEEDGLSKFREWIES 1019
+ G+G A+++++ + L +F +W E+
Sbjct: 214 VPGVGKEQALKLIHILKGQSLLQRFMQWNET 244
>gi|357139431|ref|XP_003571285.1| PREDICTED: flap endonuclease GEN-like 2-like [Brachypodium
distachyon]
Length = 706
Score = 117 bits (292), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 115/231 (49%), Gaps = 37/231 (16%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L RN S S M E + L G+P + E EAQCA + L +L +G T DSD FLF
Sbjct: 110 LRRNKGSEFSRMIKEAKNLGLALGIPCLDGVEEGEAQCALLNLTSLCEGCFTSDSDAFLF 169
Query: 940 GARSVYKNIF-DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
GAR+VY+++F + YV Y M+DIEK LG R+ LI +ALLLG DY+ G+ G G A
Sbjct: 170 GARTVYRDVFIGEGGYVICYEMEDIEKKLGFGRKSLISLALLLGCDYSNGVRGFGPEAAC 229
Query: 999 EVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVGGV 1058
+V + E+ TIL + ++RK ++ K V K VG V
Sbjct: 230 RLVKSMGED---------------TILDQILSDGVKATRKCKA----KMVGINKKKVGDV 270
Query: 1059 S----------------EFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLR 1093
S +F E+I+ F E K + S+N++++ +H LR
Sbjct: 271 STEASSSEAAMSQDSGDQFREAITAFLEPKCHSPDSENVRRVCC-QHPFLR 320
>gi|326916541|ref|XP_003204565.1| PREDICTED: flap endonuclease GEN homolog 1-like, partial [Meleagris
gallopavo]
Length = 897
Score = 116 bits (291), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 87/140 (62%), Gaps = 3/140 (2%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
R S+ + EC +LL+ G+P++ A EAEA CAY+ VDG +T+D DVFL+GA
Sbjct: 104 RTGRSLFKSILKECLQLLECLGVPWVQAAGEAEAMCAYLNAKGHVDGCITNDGDVFLYGA 163
Query: 942 RSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAI 998
++VY+N + K +++ Y M I++ LG RE LI +A+LLG DY +G+ G+G A+
Sbjct: 164 QTVYRNFAMNSKEPHLDCYTMSSIKEKLGCDRESLIGLAVLLGCDYLPKGVPGVGKEQAL 223
Query: 999 EVVNAFPEEDGLSKFREWIE 1018
+++ ++ L +F +W E
Sbjct: 224 KLIETLRGQNLLQRFEQWRE 243
>gi|291242835|ref|XP_002741315.1| PREDICTED: flap endonuclease 1-like [Saccoglossus kowalevskii]
Length = 334
Score = 116 bits (291), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 84/128 (65%), Gaps = 3/128 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC +LL + G+PYI A EAEA CA + LVDGV T+D D FL+GA+ VYKN+ +
Sbjct: 114 ECCKLLDVLGVPYIQATGEAEAMCALLNKEGLVDGVFTEDGDAFLYGAKKVYKNLTAGSN 173
Query: 952 RKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNAFPEEDGL 1010
+V+ Y M DIE+ L L R KLI MALL+G DY ++G+ +G NA +++++ + D L
Sbjct: 174 GSHVDVYDMLDIEEKLTLNRNKLIAMALLMGCDYLSDGVPSVGKTNATQLMHSLGDIDVL 233
Query: 1011 SKFREWIE 1018
+F EW +
Sbjct: 234 ERFHEWTQ 241
>gi|270006914|gb|EFA03362.1| hypothetical protein TcasGA2_TC013347 [Tribolium castaneum]
Length = 1015
Score = 115 bits (289), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 105/207 (50%), Gaps = 49/207 (23%)
Query: 820 QKSAEERTPDTYLKDSKQNTGIFATKAIE-----NVHAEATEKILEEEMQILDHEYMYLG 874
+K EER LKD + TK E + E T + L E L E L
Sbjct: 601 EKPIEERPSGQSLKDKIEKMVQAYTKPHEENEENKANTELTVEQLSEMRDNLRKEQTELL 660
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
E++ ER A +++ +MF E QELL++FG+PYIIAPMEAEAQCA++EL L D
Sbjct: 661 VEKQTKERTAGNITEQMFQEAQELLELFGVPYIIAPMEAEAQCAFLELIGLTD------- 713
Query: 935 DVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
LTRE++I +A+L+GSDYT G++G+G
Sbjct: 714 ---------------------------------ELTREQMILLAMLVGSDYTTGLTGVGP 740
Query: 995 VNAIEVVNAFPEED----GLSKFREWI 1017
V A+E++ AFP ++ GL++F+ W+
Sbjct: 741 VTALEILAAFPPKNQLISGLAEFKNWV 767
>gi|432945552|ref|XP_004083655.1| PREDICTED: flap endonuclease GEN homolog 1-like [Oryzias latipes]
Length = 783
Score = 115 bits (288), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 87/139 (62%), Gaps = 4/139 (2%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
+ EC E+L G+P+++A EAEA CAY++ LVDG +T+D D FL+GAR+VY+N
Sbjct: 115 ILKECAEMLDYLGVPWVMAAGEAEAMCAYLDSQGLVDGCITNDGDAFLYGARTVYRNFNM 174
Query: 951 DRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIEVVNAFPEE 1007
K ++ Y ++ +L L+RE L+ +A+LLG DY +GI G+G A+ ++ A +
Sbjct: 175 SSKDPQIDCYQTSRVQTELNLSRENLVGLAILLGCDYIPKGIPGVGKEQALRLIQALKGD 234
Query: 1008 DGLSKFREWIESPDPTILG 1026
L +F +W E +PT+ G
Sbjct: 235 SLLQRFIQWREE-NPTVSG 252
>gi|410955794|ref|XP_003984535.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease GEN homolog 1
[Felis catus]
Length = 913
Score = 114 bits (286), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 91/156 (58%), Gaps = 8/156 (5%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 112 QKTGRSHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLNASGYVDGCLTNDGDAFLYG 171
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL RE L+ +A+LLG DY +G+ G+G A
Sbjct: 172 AQTVYRNFSMNTKDPHVDCYTMPSIKSKLGLDREALVGLAILLGCDYLPKGVPGVGKEQA 231
Query: 998 IEVVNAFPEEDGLSKFREWIES-----PDPTILGKF 1028
++++ + L +F +W E P P ++ K
Sbjct: 232 LKLIQILKGQSLLQRFTQWNEKPSFSDPQPVVIKKL 267
>gi|449330042|gb|AGE96307.1| DNA repair protein rad2 [Encephalitozoon cuniculi]
Length = 562
Score = 114 bits (286), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 79/113 (69%), Gaps = 1/113 (0%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
S + + +L++F +PY+ APMEA+ QC +M N+VDGV+T+D+DV L+G +VY+N
Sbjct: 386 SRVLGLVKSVLEVFNIPYVDAPMEADGQCGFMCHNNVVDGVITEDNDVLLYGG-TVYRNF 444
Query: 949 FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
F + +E Y + IE++L L R+ LI ++ LLGSDYT+G+ GIG V A+E +
Sbjct: 445 FRKDREIEKYSLDRIERELQLDRKNLITLSYLLGSDYTDGVKGIGPVKALEAI 497
>gi|85014439|ref|XP_955715.1| DNA repair protein [Encephalitozoon cuniculi GB-M1]
gi|19171409|emb|CAD27134.1| similarity to DNA repair protein RAD2 (fragment) [Encephalitozoon
cuniculi GB-M1]
Length = 562
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 79/113 (69%), Gaps = 1/113 (0%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
S + + +L++F +PY+ APMEA+ QC +M N+VDGV+T+D+DV L+G +VY+N
Sbjct: 386 SRVLGLVKSVLEVFNIPYVDAPMEADGQCGFMCHNNVVDGVITEDNDVLLYGG-TVYRNF 444
Query: 949 FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
F + +E Y + IE++L L R+ LI ++ LLGSDYT+G+ GIG V A+E +
Sbjct: 445 FRKDREIEKYSLDRIERELQLDRKNLITLSYLLGSDYTDGVKGIGPVKALEAI 497
>gi|311253092|ref|XP_003125389.1| PREDICTED: flap endonuclease GEN homolog 1 [Sus scrofa]
Length = 906
Score = 114 bits (285), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
+ EC ++L+ G+P++ A EAEA CAY+ VDG +T+D D FL+GA++VY+N
Sbjct: 113 VLKECLDMLECLGIPWVQAAGEAEAMCAYLNANGCVDGCLTNDGDAFLYGAQTVYRNFTM 172
Query: 951 DRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIEVVNAFPEE 1007
+ K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A++++ +
Sbjct: 173 NTKDPHVDCYTMSSIKNILGLDRDSLVGLAILLGCDYLPKGVPGVGKEQALKLIKTLKGQ 232
Query: 1008 DGLSKFREWIE 1018
L +F +WIE
Sbjct: 233 SLLQRFNQWIE 243
>gi|390365680|ref|XP_003730870.1| PREDICTED: uncharacterized protein LOC100889325 [Strongylocentrotus
purpuratus]
Length = 1543
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 81/130 (62%), Gaps = 2/130 (1%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
S ECQELL++ G+P I + EAEA CA + A +VDG +T+D D FL+GAR VY+N+
Sbjct: 139 SGWLKECQELLELMGVPCIQSKGEAEAMCAALNSAGIVDGCMTEDGDAFLYGARIVYRNL 198
Query: 949 FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIEVVNAFPEE 1007
V+ Y M DIE L L R +L+ +A+LLG DY +G+ G+G A+ + + P
Sbjct: 199 NMATGKVDCYRMDDIETKLDLDRGRLVALAILLGCDYLPKGVPGVGKEVAMRFMKSLPSS 258
Query: 1008 -DGLSKFREW 1016
D L+ F++W
Sbjct: 259 VDPLNLFQDW 268
>gi|157819261|ref|NP_001100380.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 [Rattus norvegicus]
gi|149046241|gb|EDL99134.1| excision repair cross-complementing rodent repair deficiency,
complementation group 5 (mapped) [Rattus norvegicus]
Length = 862
Score = 114 bits (284), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L ++++ +R A SV+ +MF E QELL++FG+PYI APMEAEAQCA ++L + G +TD
Sbjct: 747 LEAQKQQQDRIAASVTGQMFLESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITD 806
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDL--GLTREKLIR 976
DSD++LFGAR VYKN F+ K+VE Y D L G T+ K+ R
Sbjct: 807 DSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYNQLESGGTKLKITR 852
>gi|363732508|ref|XP_419963.2| PREDICTED: flap endonuclease GEN homolog 1 [Gallus gallus]
Length = 639
Score = 114 bits (284), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 869 EYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDG 928
E Y + + R S + EC +LL+ G+P++ A EAEA CAY+ VDG
Sbjct: 91 EIRYGASNKHGVARTGRSSFKSILKECLQLLECLGVPWVQAAGEAEAMCAYLNAKGHVDG 150
Query: 929 VVTDDSDVFLFGARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
+T+D DVFL+GA++VY+N + K +++ Y M I++ LG RE LI +A+LLG DY
Sbjct: 151 CITNDGDVFLYGAQTVYRNFAMNSKEPHLDCYTMSSIKEKLGCDRESLIGLAVLLGCDYL 210
Query: 987 -EGISGIGIVNAIEVVNAFPEEDGLSKFREWIE 1018
+GI G+G A++++ ++ L +F +W E
Sbjct: 211 PKGIPGVGKEQALKLIETLRGQNLLQRFEQWKE 243
>gi|402466077|gb|EJW01645.1| hypothetical protein EDEG_03812 [Edhazardia aedis USNM 41457]
Length = 856
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 81/105 (77%), Gaps = 2/105 (1%)
Query: 897 ELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVE 956
++L++F LP++ AP+EA++QCAY L N+VD V+T+D+D+FLFG + +Y+N F + K ++
Sbjct: 646 DILKIFNLPFVEAPLEADSQCAYFSLKNIVDAVITEDNDIFLFGGKKIYRNYFKNGKNID 705
Query: 957 TYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
Y + +I+K ++R+++I ++L+LGSDY +GI G G+ +++++
Sbjct: 706 LYDINEIKK--IISRDEMIMISLILGSDYCDGIKGFGLKKSLDLI 748
>gi|359490377|ref|XP_002263340.2| PREDICTED: flap endonuclease GEN-like 2-like [Vitis vinifera]
gi|297741051|emb|CBI31782.3| unnamed protein product [Vitis vinifera]
Length = 565
Score = 113 bits (282), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/135 (46%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L RN S S M E + L G+P + EAEAQCA + +L DG T DSDVFLF
Sbjct: 110 LRRNMGSEFSCMIKEAKVLGLALGIPCLDGIEEAEAQCALLNSESLCDGCFTSDSDVFLF 169
Query: 940 GARSVYKNI-FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
GAR+VY++I + YV Y M DIE LG R LI +ALLLGSDY++G+ G G +A
Sbjct: 170 GARTVYRDICLGEGGYVVCYEMADIESTLGFGRNSLITLALLLGSDYSQGVHGFGPESAC 229
Query: 999 EVVNAFPEEDGLSKF 1013
++V + EE L K
Sbjct: 230 QIVKSVGEEVVLKKI 244
>gi|329664332|ref|NP_001192379.1| flap endonuclease GEN homolog 1 [Bos taurus]
gi|296482355|tpg|DAA24470.1| TPA: flap structure-specific endonuclease-like [Bos taurus]
Length = 906
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 86/141 (60%), Gaps = 3/141 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLNASGYVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLNRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIE 1018
++++ + L +F +W E
Sbjct: 223 LKLIKILKGQSLLQRFNQWSE 243
>gi|149728133|ref|XP_001503466.1| PREDICTED: flap endonuclease GEN homolog 1 [Equus caballus]
Length = 908
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 92/156 (58%), Gaps = 8/156 (5%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLNASGYVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIE-----SPDPTILGKF 1028
++++ + L +F +W E +P P ++ K
Sbjct: 223 LKLIQILKGQSLLERFNQWNEKSGYSNPQPQVIKKL 258
>gi|440909937|gb|ELR59789.1| Flap endonuclease GEN-like protein 1, partial [Bos grunniens mutus]
Length = 906
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 86/141 (60%), Gaps = 3/141 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLNASGYVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLNRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIE 1018
++++ + L +F +W E
Sbjct: 223 LKLIKILKGQSLLQRFNQWSE 243
>gi|34558672|gb|AAQ75078.1| RAD2 [Cryptosporidium parvum]
Length = 1147
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ EM + LL+ G+P+I +P EAEAQ + + N+ GV++DDSD +FGA+ +++
Sbjct: 875 ITKEMQYQICLLLKALGIPWIDSPGEAEAQASILTQLNICHGVLSDDSDCLIFGAKKIFR 934
Query: 947 NIFDDRKYVETYFMQDIEKDLGLTR-EKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFP 1005
N F VE Y + ++K LG+ + E+ +A+LLG DYT G++GIG VNA+EV+ A+P
Sbjct: 935 NFFSGNS-VEMYDLNQVKKYLGIEKQEQFYILAILLGCDYTVGVNGIGPVNAVEVLKAYP 993
Query: 1006 EEDGLSKFREW 1016
E + + F+ W
Sbjct: 994 ELEDMILFQNW 1004
Score = 40.4 bits (93), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 180 ASLPLEEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKV 239
A L E DE M LP T +DP V L +Q ++L+Q+R+ + R
Sbjct: 301 AFLRATESSNDERRLMDLPLDT-EIDPQVFEQLNSKLQYEILIQLRDAWINALRSNAVDT 359
Query: 240 KKAPEKFSELQIQAYLKTVAFRREIDEVQKAAA 272
K +FS QI+ YL+ + +EI+ ++ A
Sbjct: 360 KDNMSQFSNSQIECYLRYLRINQEIERLKVRMA 392
>gi|66356946|ref|XP_625651.1| XPG, DNA excision repair protein, flap endonuclease [Cryptosporidium
parvum Iowa II]
gi|46226699|gb|EAK87678.1| XPG, DNA excision repair protein, flap endonuclease [Cryptosporidium
parvum Iowa II]
Length = 1147
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ EM + LL+ G+P+I +P EAEAQ + + N+ GV++DDSD +FGA+ +++
Sbjct: 875 ITKEMQYQICLLLKALGIPWIDSPGEAEAQASILTQLNICHGVLSDDSDCLIFGAKKIFR 934
Query: 947 NIFDDRKYVETYFMQDIEKDLGLTR-EKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFP 1005
N F VE Y + ++K LG+ + E+ +A+LLG DYT G++GIG VNA+EV+ A+P
Sbjct: 935 NFFSGNS-VEMYDLNQVKKYLGIEKQEQFYILAILLGCDYTVGVNGIGPVNAVEVLKAYP 993
Query: 1006 EEDGLSKFREW 1016
E + + F+ W
Sbjct: 994 ELEDMILFQNW 1004
Score = 40.4 bits (93), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 180 ASLPLEEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKV 239
A L E DE M LP T +DP V L +Q ++L+Q+R+ + R
Sbjct: 301 AFLRATESSNDERRLMDLPLDT-EIDPQVFEQLNSKLQYEILIQLRDAWINALRSNAVDT 359
Query: 240 KKAPEKFSELQIQAYLKTVAFRREIDEVQKAAA 272
K +FS QI+ YL+ + +EI+ ++ A
Sbjct: 360 KDNMSQFSNSQIECYLRYLRINQEIERLKVRMA 392
>gi|67589751|ref|XP_665434.1| RAD2 [Cryptosporidium hominis TU502]
gi|54656123|gb|EAL35205.1| RAD2 [Cryptosporidium hominis]
Length = 1158
Score = 112 bits (281), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ EM + LL+ G+P+I +P EAEAQ + + N+ GV++DDSD +FGA+ +++
Sbjct: 886 ITKEMQYQICLLLKALGIPWIDSPGEAEAQASILTQLNICHGVLSDDSDCLIFGAKKIFR 945
Query: 947 NIFDDRKYVETYFMQDIEKDLGLTR-EKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFP 1005
N F VE Y + ++K LG+ + E+ +A+LLG DYT G++GIG VNA+EV+ A+P
Sbjct: 946 NFFSGNS-VEMYDLNQVKKYLGIEKQEQFYILAILLGCDYTVGVNGIGPVNAVEVLKAYP 1004
Query: 1006 EEDGLSKFREW 1016
E + + F+ W
Sbjct: 1005 ELEDMILFQNW 1015
Score = 41.6 bits (96), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Query: 180 ASLPLEEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKV 239
A L + E DE M LP T +DP V L +Q ++L+Q+R+ + R
Sbjct: 301 AFLRVTESSSDERRLMDLPLDT-EIDPQVFEQLNSKLQYEILIQLRDAWINALRSNAVDT 359
Query: 240 KKAPEKFSELQIQAYLKTVAFRREIDEVQKAAA 272
K +FS QI+ YL+ + +EI+ ++ A
Sbjct: 360 KDNMSQFSNSQIECYLRYLRINQEIERLKVRMA 392
>gi|426223166|ref|XP_004005748.1| PREDICTED: flap endonuclease GEN homolog 1 [Ovis aries]
Length = 931
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 86/141 (60%), Gaps = 3/141 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 123 QKTGRSHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLNASGYVDGCLTNDGDTFLYG 182
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 183 AQTVYRNFTMNTKDPHVDCYTMSSIKTKLGLNRDALVGLAILLGCDYLPKGVPGVGKEQA 242
Query: 998 IEVVNAFPEEDGLSKFREWIE 1018
++++ + L +F +W E
Sbjct: 243 LKLIKILKGQSLLQRFNQWNE 263
>gi|354481807|ref|XP_003503092.1| PREDICTED: flap endonuclease GEN homolog 1 [Cricetulus griseus]
Length = 876
Score = 112 bits (280), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 88/147 (59%), Gaps = 3/147 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC E+L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLEMLECLGIPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A+ VY+N + K +V+ Y I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQMVYRNFTMNTKDPHVDCYTASSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIESPDPTI 1024
++++ + L +F +WIE P +I
Sbjct: 223 LKLLRILKGQSLLQRFNQWIEEPCSSI 249
>gi|242080167|ref|XP_002444852.1| hypothetical protein SORBIDRAFT_07g000270 [Sorghum bicolor]
gi|241941202|gb|EES14347.1| hypothetical protein SORBIDRAFT_07g000270 [Sorghum bicolor]
Length = 698
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L RN S S M E + L G+P + EAEAQCA + A+L DG T DSD FLF
Sbjct: 111 LRRNKSSEFSRMIKEAKHLGLALGIPCLDGVEEAEAQCAMLNFASLCDGCFTSDSDSFLF 170
Query: 940 GARSVYKNIF-DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
GAR+VY+++F + YV Y M+DI+K LG R LI +A+LLGSDY+ G+ G G A
Sbjct: 171 GARTVYRDVFIGEGGYVICYEMEDIQKKLGFGRNSLISLAVLLGSDYSNGVHGFGPELAC 230
Query: 999 EVVNA 1003
+V +
Sbjct: 231 RLVKS 235
>gi|301758368|ref|XP_002915044.1| PREDICTED: flap endonuclease GEN homolog 1-like [Ailuropoda
melanoleuca]
Length = 907
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLNASGYVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIES----PDPTILGKF 1028
++++ + L +F +W E P P + K
Sbjct: 223 LKLIRTLKGQSLLQRFTQWNEESCSDPQPLAIKKL 257
>gi|395828598|ref|XP_003787457.1| PREDICTED: flap endonuclease GEN homolog 1 [Otolemur garnettii]
Length = 884
Score = 112 bits (280), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 90/155 (58%), Gaps = 8/155 (5%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC E+L+ G+P++ A EAEA CA++ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSLLKECLEMLECLGIPWVQAAGEAEAMCAHLNAGGHVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VYKN + K +V+ Y M ++ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYKNFTMNTKDPHVDCYTMSSVKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIES-----PDPTILGK 1027
++++ + L +F +W E+ P P + K
Sbjct: 223 LKLIQILKGQSLLQRFNQWKETSYNSNPQPLVAKK 257
>gi|281344218|gb|EFB19802.1| hypothetical protein PANDA_002978 [Ailuropoda melanoleuca]
Length = 906
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 90/155 (58%), Gaps = 7/155 (4%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLKECLDMLECLGIPWVQAAGEAEAMCAYLNASGYVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIES----PDPTILGKF 1028
++++ + L +F +W E P P + K
Sbjct: 223 LKLIRTLKGQSLLQRFTQWNEESCSDPQPLAIKKL 257
>gi|157821963|ref|NP_001100187.1| flap endonuclease GEN homolog 1 [Rattus norvegicus]
gi|149050926|gb|EDM03099.1| similar to RIKEN cDNA 5830483C08 gene (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 908
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 87/143 (60%), Gaps = 3/143 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC E+L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLEMLECLGMPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y + I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTVSSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIESP 1020
++++ + L +F +W E P
Sbjct: 223 LKLLQILKGQSLLQRFNQWTEEP 245
>gi|296224442|ref|XP_002758061.1| PREDICTED: flap endonuclease GEN homolog 1 [Callithrix jacchus]
Length = 909
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 90/156 (57%), Gaps = 8/156 (5%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLNAVGRVDGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYKMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIE-----SPDPTILGKF 1028
++++ + L +F W E SP+P + K
Sbjct: 223 LKLIQILKGQSLLQRFNRWNETSCNSSPEPLVTKKL 258
>gi|355751124|gb|EHH55379.1| hypothetical protein EGM_04579 [Macaca fascicularis]
Length = 907
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 13/216 (6%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSTIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIE-----SPDPTI---LGKFDVQTGASSRKRRSSDGDKDVN 1049
++++ + L +F W E SP P + L V + S K +G +
Sbjct: 223 LKLIQILKGQSLLQRFNRWNETSCNSSPQPLVTKKLAHCSVCSHPGSPKDHERNGCRLCK 282
Query: 1050 YAKNSVGGVSEFDESI--SQFDEDKQSAEYSQNMKK 1083
K E+ + + D+Q +E NMKK
Sbjct: 283 SDKYCEPHDYEYCCPCDWHRTEHDRQLSEVENNMKK 318
>gi|109102065|ref|XP_001092423.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 2 [Macaca mulatta]
gi|109102069|ref|XP_001092651.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 4 [Macaca mulatta]
Length = 907
Score = 112 bits (279), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 13/216 (6%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSTIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIE-----SPDPTI---LGKFDVQTGASSRKRRSSDGDKDVN 1049
++++ + L +F W E SP P + L V + S K +G +
Sbjct: 223 LKLIQILKGQSLLQRFNRWNETSCNSSPQPLVTKKLAHCSVCSHPGSPKDHERNGCRLCK 282
Query: 1050 YAKNSVGGVSEFDESI--SQFDEDKQSAEYSQNMKK 1083
K E+ + + D+Q +E NMKK
Sbjct: 283 SDKYCEPHDYEYCCPCDWHRTEHDRQLSEVENNMKK 318
>gi|356559829|ref|XP_003548199.1| PREDICTED: flap endonuclease GEN-like 2-like [Glycine max]
Length = 588
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 90/153 (58%), Gaps = 7/153 (4%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L+RN S S M E + L G+ + EAEAQCA + +L DG + DSD+FLF
Sbjct: 112 LQRNMGSEFSCMIKEAKVLGMALGISCLNGIEEAEAQCALLNFESLCDGCFSSDSDIFLF 171
Query: 940 GARSVYKNI-FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
GAR+VY++I D YV Y M DIE+ LG R+ LI ++LLLGSDY +G+ G+G +A
Sbjct: 172 GARTVYRDICLGDGGYVVCYEMTDIERKLGFGRDSLIALSLLLGSDYYQGVHGLGPESAC 231
Query: 999 EVVNAFPEEDGLSKFRE----WIESPD--PTIL 1025
++V + ++ L KF W++ P+IL
Sbjct: 232 QIVKSIGDKYILKKFASEGLGWVKKRKGIPSIL 264
>gi|383418083|gb|AFH32255.1| flap endonuclease GEN homolog 1 [Macaca mulatta]
gi|383418085|gb|AFH32256.1| flap endonuclease GEN homolog 1 [Macaca mulatta]
Length = 907
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 13/216 (6%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSTIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIE-----SPDPTI---LGKFDVQTGASSRKRRSSDGDKDVN 1049
++++ + L +F W E SP P + L V + S K +G +
Sbjct: 223 LKLIQILKGQSLLQRFNRWNETSCNSSPQPLVTKKLAHCSVCSHPGSPKDHERNGCRLCK 282
Query: 1050 YAKNSVGGVSEFDESI--SQFDEDKQSAEYSQNMKK 1083
K E+ + + D+Q +E NMKK
Sbjct: 283 SDKYCEPHDYEYCCPCDWHRTEHDRQLSEVENNMKK 318
>gi|396082166|gb|AFN83777.1| Rad2 [Encephalitozoon romaleae SJ-2008]
Length = 559
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/116 (46%), Positives = 81/116 (69%), Gaps = 3/116 (2%)
Query: 895 CQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKY 954
+++L +F + Y+ AP EA++QC +M N+VDGV+T+D+DV L+G +VY+N F +
Sbjct: 389 IKDVLDVFNISYVDAPTEADSQCGFMCYRNIVDGVITEDNDVLLYGG-TVYRNFFRRDRE 447
Query: 955 VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN--AFPEED 1008
+E Y ++ IEKDL L R+ LIR++ +LGSDYT G+ GIG V A+E V + EED
Sbjct: 448 IEKYSLEKIEKDLRLDRKNLIRLSHMLGSDYTPGVKGIGPVKALEAVRKGSIEEED 503
>gi|115474331|ref|NP_001060762.1| Os08g0101600 [Oryza sativa Japonica Group]
gi|75162699|sp|Q8W5R1.1|GENL2_ORYSJ RecName: Full=Flap endonuclease GEN-like 2; AltName: Full=OsSEND-1;
AltName: Full=Single-strand DNA endonuclease 1
gi|16923283|dbj|BAB72003.1| single-strand DNA endonuclease-1 [Oryza sativa Japonica Group]
gi|113622731|dbj|BAF22676.1| Os08g0101600 [Oryza sativa Japonica Group]
gi|222639760|gb|EEE67892.1| hypothetical protein OsJ_25722 [Oryza sativa Japonica Group]
Length = 641
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L RN S S M E + L G+P + EAEAQCA ++L +L DG T DSD FLF
Sbjct: 112 LRRNKGSEFSCMIKEAKRLGMALGIPCLDGLEEAEAQCASLDLESLCDGCFTSDSDAFLF 171
Query: 940 GARSVYKNIF-DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
GAR+VY+++F + YV Y M+DIEK LG R LI +A+LLGSDY+ G++G G A
Sbjct: 172 GARTVYRDVFIGEGGYVICYEMEDIEKTLGFGRNSLISLAVLLGSDYSNGVNGFGPETAC 231
Query: 999 EVVNA 1003
+V +
Sbjct: 232 RLVKS 236
>gi|114576279|ref|XP_001136636.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 3 [Pan
troglodytes]
gi|410034836|ref|XP_003949810.1| PREDICTED: flap endonuclease GEN homolog 1 [Pan troglodytes]
gi|410218742|gb|JAA06590.1| Gen homolog 1, endonuclease [Pan troglodytes]
gi|410255580|gb|JAA15757.1| Gen homolog 1, endonuclease [Pan troglodytes]
gi|410287868|gb|JAA22534.1| Gen homolog 1, endonuclease [Pan troglodytes]
gi|410352247|gb|JAA42727.1| Gen homolog 1, endonuclease [Pan troglodytes]
Length = 908
Score = 111 bits (278), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC +L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
AR+VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 ARTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIES 1019
++++ + L +F W E+
Sbjct: 223 LKLIQILKGQSLLQRFNRWNET 244
>gi|355565476|gb|EHH21905.1| hypothetical protein EGK_05073 [Macaca mulatta]
Length = 907
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 89/156 (57%), Gaps = 8/156 (5%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSTIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIE-----SPDPTILGKF 1028
++++ + L +F W E SP P + K
Sbjct: 223 LKLIQILKGQSLLQRFNRWNETSCNSSPQPLVTKKL 258
>gi|397513474|ref|XP_003827038.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 1 [Pan paniscus]
gi|397513476|ref|XP_003827039.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 2 [Pan paniscus]
gi|397513478|ref|XP_003827040.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 3 [Pan paniscus]
Length = 908
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC +L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
AR+VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 ARTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIES 1019
++++ + L +F W E+
Sbjct: 223 LKLIQILKGQSLLQRFNRWNET 244
>gi|402890148|ref|XP_003908353.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 1 [Papio anubis]
gi|402890150|ref|XP_003908354.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 2 [Papio anubis]
gi|402890152|ref|XP_003908355.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 3 [Papio anubis]
Length = 906
Score = 111 bits (277), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 89/156 (57%), Gaps = 8/156 (5%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSTIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIE-----SPDPTILGKF 1028
++++ + L +F W E SP P + K
Sbjct: 223 LKLIQILKGQSLLQRFNRWNETSCNSSPQPLVTKKL 258
>gi|51092043|gb|AAT94435.1| RE62451p [Drosophila melanogaster]
Length = 932
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 77/119 (64%)
Query: 846 AIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 905
A E + ++ T + L+E L E L E+ + +R S+S M +CQELL++FG+P
Sbjct: 814 AAEALKSQKTSEELQELATNLAQERKELEIERNRQDRMGMSISQRMSIDCQELLRLFGIP 873
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIE 964
YI+APMEAEAQCA++ +L G +TDDSD++LFG R+VYKN F K+V + + IE
Sbjct: 874 YIVAPMEAEAQCAFLNATDLTHGTITDDSDIWLFGGRTVYKNFFAQNKHVMEFRAEQIE 932
>gi|218200332|gb|EEC82759.1| hypothetical protein OsI_27479 [Oryza sativa Indica Group]
Length = 632
Score = 110 bits (276), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L RN S S M E + L G+P + EAEAQCA ++L +L DG T DSD FLF
Sbjct: 103 LRRNKGSEFSCMIKEAKRLGMALGIPCLDGLEEAEAQCASLDLESLCDGCFTSDSDAFLF 162
Query: 940 GARSVYKNIF-DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
GAR+VY+++F + YV Y M+DIEK LG R LI +A+LLGSDY+ G++G G A
Sbjct: 163 GARTVYRDVFIGEGGYVICYEMEDIEKTLGFGRNSLISLAVLLGSDYSNGVNGFGPETAC 222
Query: 999 EVVNA 1003
+V +
Sbjct: 223 RLVKS 227
>gi|332253767|ref|XP_003276003.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 1 [Nomascus
leucogenys]
gi|332253769|ref|XP_003276004.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 2 [Nomascus
leucogenys]
Length = 907
Score = 110 bits (276), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 89/156 (57%), Gaps = 8/156 (5%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + + EC +L+ G+P++ A EAEA CAY+ V+G +T+D D FL+G
Sbjct: 103 QKTGRSHFTSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNAGGHVNGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIE-----SPDPTILGKF 1028
++++ + L +F W E SP P + K
Sbjct: 223 LKLIQILKGQSLLQRFNRWNETSCNSSPQPLVTKKL 258
>gi|432096863|gb|ELK27441.1| Flap endonuclease GEN like protein 1 [Myotis davidii]
Length = 903
Score = 110 bits (275), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 86/141 (60%), Gaps = 3/141 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ELL+ G+P++ A EAEA C+Y++ + VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLELLECLGIPWVQAAGEAEAMCSYLDASGYVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
AR+VY+N + K +V+ Y I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 ARTVYRNFTMNTKDPHVDCYTASSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIE 1018
++++ + L +F +W E
Sbjct: 223 LKLIQILKGQSLLQRFIQWSE 243
>gi|403288138|ref|XP_003935270.1| PREDICTED: flap endonuclease GEN homolog 1 [Saimiri boliviensis
boliviensis]
Length = 909
Score = 110 bits (275), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 85/142 (59%), Gaps = 3/142 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLNAVGCVDGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIES 1019
++++ + L +F W E+
Sbjct: 223 LKLIQILKGQSLLQRFNRWNET 244
>gi|327261246|ref|XP_003215442.1| PREDICTED: flap endonuclease GEN homolog 1-like [Anolis carolinensis]
Length = 631
Score = 110 bits (274), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 81/138 (58%), Gaps = 3/138 (2%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
R S EC E+L+ G+P++ A EAEA CAY+ VD +T+D D FL+GA
Sbjct: 104 RTGRSHLKSFLKECLEMLECLGVPWVQAAGEAEAMCAYLNSNGYVDACITNDGDAFLYGA 163
Query: 942 RSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAI 998
++VY+N + K +V+ Y + IE+ LG +RE LI +A+LLG DY +G+ G+G A+
Sbjct: 164 QTVYRNFTMNTKDPHVDCYSISAIEEKLGCSRESLIGLAVLLGCDYLPKGVPGVGKEQAL 223
Query: 999 EVVNAFPEEDGLSKFREW 1016
++N + L +F W
Sbjct: 224 RLINTLKGQSLLQRFEYW 241
>gi|194018531|ref|NP_872431.3| flap endonuclease GEN homolog 1 [Homo sapiens]
gi|194018535|ref|NP_001123481.1| flap endonuclease GEN homolog 1 [Homo sapiens]
gi|290457644|sp|Q17RS7.2|GEN_HUMAN RecName: Full=Flap endonuclease GEN homolog 1
Length = 908
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC +L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIES 1019
++++ + L +F W E+
Sbjct: 223 LKLIQILKGQSLLQRFNRWNET 244
>gi|410926473|ref|XP_003976703.1| PREDICTED: flap endonuclease GEN homolog 1-like [Takifugu rubripes]
Length = 827
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
+ EC ++L + G+P++ A EAEA CA+++ LVDG +T+D D FL+GA+ VY+N
Sbjct: 114 VLKECADMLDILGVPWVTAAGEAEAMCAFLDSQGLVDGCITNDGDAFLYGAQIVYRNFHT 173
Query: 951 DRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIEVVNAFPEE 1007
+ K V+ Y ++ +L L+RE L+ +A+LLG DY +GI G+G A++++ E+
Sbjct: 174 NSKDPLVDCYKTSRVQTELHLSRENLVGLAVLLGCDYIPKGIPGVGKEQALKLLRMLKEQ 233
Query: 1008 DGLSKFREWIE 1018
L F +W E
Sbjct: 234 TLLQWFTQWEE 244
>gi|109658826|gb|AAI17205.1| Gen homolog 1, endonuclease (Drosophila) [Homo sapiens]
gi|313883890|gb|ADR83431.1| Gen homolog 1, endonuclease (Drosophila) (GEN1), transcript variant 2
[synthetic construct]
Length = 908
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC +L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIES 1019
++++ + L +F W E+
Sbjct: 223 LKLIQILKGQSLLQRFNRWNET 244
>gi|109658672|gb|AAI17207.1| Gen homolog 1, endonuclease (Drosophila) [Homo sapiens]
Length = 908
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC +L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIES 1019
++++ + L +F W E+
Sbjct: 223 LKLIQILKGQSLLQRFNRWNET 244
>gi|47077235|dbj|BAD18538.1| unnamed protein product [Homo sapiens]
Length = 908
Score = 109 bits (273), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC +L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIES 1019
++++ + L +F W E+
Sbjct: 223 LKLIQILKGQSLLQRFNRWNET 244
>gi|302764352|ref|XP_002965597.1| hypothetical protein SELMODRAFT_85061 [Selaginella moellendorffii]
gi|300166411|gb|EFJ33017.1| hypothetical protein SELMODRAFT_85061 [Selaginella moellendorffii]
Length = 552
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 81/140 (57%), Gaps = 5/140 (3%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 953
EC ELL + +P + A EAEA CA +E +VD VT DSD FL GAR V + + D K
Sbjct: 121 ECVELLGLLNVPVLRATSEAEALCAELERNGVVDACVTPDSDAFLHGARCVIQTLQADIK 180
Query: 954 --YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNAFPEEDGL 1010
VE+Y DI L L RE LI +ALL+G DY GI G+G NA+ +V F +++ L
Sbjct: 181 KPLVESYLASDIRLALQLEREHLIALALLVGCDYNLRGIPGVGYSNAMRLVQHFSKDEIL 240
Query: 1011 SKFREW--IESPDPTILGKF 1028
R+W E P P ++GK
Sbjct: 241 DNLRKWGRREYPSPEVIGKL 260
>gi|291387124|ref|XP_002710085.1| PREDICTED: Gen homolog 1, endonuclease [Oryctolagus cuniculus]
Length = 904
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 86/145 (59%), Gaps = 7/145 (4%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
+ EC +LL G+P++ A EAEA CAY+ VDG +T+D D FL+GA++VY+N
Sbjct: 113 VLRECLDLLDCLGIPWVQAAGEAEAMCAYLNAEGYVDGCLTNDGDAFLYGAQTVYRNFTM 172
Query: 951 DRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIEVVNAFPEE 1007
+ K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A++++ +
Sbjct: 173 NVKDPHVDCYSMSSIKVQLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILKGQ 232
Query: 1008 DGLSKFREWIE----SPDPTILGKF 1028
L +F +W E +P P + K
Sbjct: 233 SLLQRFDQWNEKSHSNPQPAVTKKL 257
>gi|198434339|ref|XP_002124511.1| PREDICTED: similar to Flap endonuclease GEN homolog 1 [Ciona
intestinalis]
Length = 579
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 82/130 (63%), Gaps = 5/130 (3%)
Query: 892 FAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI--F 949
F EC +LL G+P+I + EAEA CA + +VDG +T+DSD FL+GA+SVY+N+
Sbjct: 114 FNECCQLLDQLGIPWIKSEGEAEATCAALNSVGVVDGCMTNDSDTFLYGAKSVYRNLSMT 173
Query: 950 DDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIEVVNAFPE 1006
DR VE Y + DIE L L R+ LI + LLLG DY+ +G+ G+G AI +++++
Sbjct: 174 TDRNDIDVECYELCDIESKLQLNRKSLIALGLLLGCDYSPQGVPGVGKKQAIMLLSSWKN 233
Query: 1007 EDGLSKFREW 1016
D L K + W
Sbjct: 234 IDPLEKLKAW 243
>gi|73980577|ref|XP_540093.2| PREDICTED: flap endonuclease GEN homolog 1 [Canis lupus familiaris]
Length = 908
Score = 108 bits (271), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 86/145 (59%), Gaps = 7/145 (4%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
+ EC ++L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+GA++VY+N
Sbjct: 113 VLKECLDMLECLGIPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYGAQTVYRNFTM 172
Query: 951 DRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIEVVNAFPEE 1007
+ K +V+ Y I+ LGL R+ L+ +A+LLG DY +G+ G+G A++++ +
Sbjct: 173 NTKDPHVDCYTASSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQALKLIQILKGQ 232
Query: 1008 DGLSKFREWIES----PDPTILGKF 1028
L +F +W E P P + K
Sbjct: 233 SLLQRFTQWSEESCSDPQPLAIKKL 257
>gi|224136982|ref|XP_002322464.1| predicted protein [Populus trichocarpa]
gi|222869460|gb|EEF06591.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 83/134 (61%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L RN S S M E +++ G+P + + EAEAQCA + +L DG + DSDVFLF
Sbjct: 111 LRRNMGSEFSCMIKEAKDIGLALGIPCLDSIEEAEAQCALLNTESLCDGCFSSDSDVFLF 170
Query: 940 GARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIE 999
GAR+VY++I +V Y M+++E+ LG R LI +AL+LGSDY+ G+ G+G +A +
Sbjct: 171 GARTVYRDICLGEGHVVCYEMEEVERKLGFGRNSLITLALILGSDYSPGVHGLGPESACQ 230
Query: 1000 VVNAFPEEDGLSKF 1013
+V + + + L K
Sbjct: 231 IVKSIGDSNVLQKI 244
>gi|344246628|gb|EGW02732.1| Flap endonuclease GEN-like 1 [Cricetulus griseus]
Length = 317
Score = 108 bits (270), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 88/147 (59%), Gaps = 3/147 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC E+L+ G+P++ A EAEA CAY+ + VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLEMLECLGIPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNA 997
A+ VY+N + K +V+ Y I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQMVYRNFTMNTKDPHVDCYTASSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIESPDPTI 1024
++++ + L +F +WIE P +I
Sbjct: 223 LKLLRILKGQSLLQRFNQWIEEPCSSI 249
>gi|426334793|ref|XP_004028921.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 1 [Gorilla gorilla
gorilla]
gi|426334795|ref|XP_004028922.1| PREDICTED: flap endonuclease GEN homolog 1 isoform 2 [Gorilla gorilla
gorilla]
Length = 908
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 84/142 (59%), Gaps = 3/142 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC +L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNADGHVDGCLTNDGDTFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIES 1019
++++ + L +F W E+
Sbjct: 223 LKLIQILKGQSLLQRFNRWNET 244
>gi|226529749|ref|NP_001149363.1| XPG I-region family protein [Zea mays]
gi|224029981|gb|ACN34066.1| unknown [Zea mays]
gi|413941545|gb|AFW74194.1| XPG I-region family protein [Zea mays]
Length = 688
Score = 108 bits (270), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 1/126 (0%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L RN S S M E + L G+P + EAEAQCA + ++L DG T DSD FLF
Sbjct: 111 LRRNKSSEFSRMIKEAKHLGLALGIPCLDGMEEAEAQCALLNFSSLCDGCFTSDSDSFLF 170
Query: 940 GARSVYKNIF-DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
GA++VY+++F + YV Y M+DI+ LG R LI +A+LLGSDY+ G+ G G A
Sbjct: 171 GAKTVYRDVFIGEGGYVICYEMEDIQNKLGFGRNSLISLAVLLGSDYSNGVHGFGPEAAC 230
Query: 999 EVVNAF 1004
+V +
Sbjct: 231 RLVKSL 236
>gi|357498397|ref|XP_003619487.1| Flap endonuclease GEN-like protein [Medicago truncatula]
gi|355494502|gb|AES75705.1| Flap endonuclease GEN-like protein [Medicago truncatula]
Length = 571
Score = 107 bits (268), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 82/135 (60%), Gaps = 1/135 (0%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L RN S S M +E + L G+ + EAEAQCA + +L DG + DSD+FLF
Sbjct: 110 LRRNLGSEFSCMISEAKILGMALGVSCLNGIEEAEAQCALLNSESLCDGCFSSDSDIFLF 169
Query: 940 GARSVYKNI-FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
GAR+VY++I D YV Y M DIE+ LG R+ LI ++LLLGSDY G+ G+G +A
Sbjct: 170 GARTVYRDICLGDGGYVVCYEMADIERKLGFGRDSLICLSLLLGSDYYPGVHGLGPDSAC 229
Query: 999 EVVNAFPEEDGLSKF 1013
++V + ++ L KF
Sbjct: 230 QIVKSIGDKFVLKKF 244
>gi|449446177|ref|XP_004140848.1| PREDICTED: flap endonuclease GEN-like 2-like [Cucumis sativus]
Length = 563
Score = 107 bits (268), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L+RN S S M E Q L G+P + A EAEAQCA + L DG T DSD FLF
Sbjct: 110 LKRNKGSEFSLMIKEAQALGLALGIPCLDAVEEAEAQCALLNSELLCDGCFTSDSDAFLF 169
Query: 940 GARSVYKNI-FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
GAR+VY++I D +V Y M DIE LG R +I ALLLGSDY++G+ G+G +A
Sbjct: 170 GARTVYRDICLGDSGHVVCYEMDDIETRLGFGRNSMITFALLLGSDYSQGVYGMGRESAC 229
Query: 999 EVVNA 1003
++V A
Sbjct: 230 QLVKA 234
>gi|348574836|ref|XP_003473196.1| PREDICTED: flap endonuclease GEN homolog 1-like [Cavia porcellus]
Length = 906
Score = 107 bits (266), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 87/141 (61%), Gaps = 3/141 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
+++ S + EC E+L+ G+P++ A EAEA CA+++ VDG +T+D D FL+G
Sbjct: 103 QKSGRSHFKSVLRECLEMLESLGIPWVQAAGEAEAMCAHLDAGGQVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNPKDPHVDCYTASSIKNKLGLDRDALVALAVLLGCDYLPKGVPGVGREQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIE 1018
++++ + E L +F +W E
Sbjct: 223 LKLIQSLKGESLLQRFDQWNE 243
>gi|344280345|ref|XP_003411944.1| PREDICTED: flap endonuclease GEN homolog 1 [Loxodonta africana]
Length = 739
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 84/139 (60%), Gaps = 3/139 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC ++L+ G+P++ A EAEA CAY+ VDG +T+D D FL+G
Sbjct: 103 QKTGRSHFKSVLRECLDMLECLGIPWVQAAGEAEAMCAYLNANGYVDGCLTNDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + K +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+G A
Sbjct: 163 AQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGVAILLGCDYLPKGVPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREW 1016
++++ + L +F +W
Sbjct: 223 LKLIQTLRGQSLLQRFNQW 241
>gi|255539481|ref|XP_002510805.1| conserved hypothetical protein [Ricinus communis]
gi|223549920|gb|EEF51407.1| conserved hypothetical protein [Ricinus communis]
Length = 586
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 83/139 (59%), Gaps = 1/139 (0%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E L RN S S M E + L G+ + + EAEAQCA + +L DG + DSD
Sbjct: 107 EACSLPRNMGSEFSRMIKEAKILGLALGISCLDSLEEAEAQCALLNSESLCDGCFSSDSD 166
Query: 936 VFLFGARSVYKNI-FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
VFLFGAR+VY++I D +V Y M DIE+ LG R LI +ALLLGSDY++G+ G+G
Sbjct: 167 VFLFGARTVYRDICLGDGGHVVCYEMADIERKLGFGRNSLITLALLLGSDYSQGVRGLGP 226
Query: 995 VNAIEVVNAFPEEDGLSKF 1013
+A ++V + + + L +
Sbjct: 227 ESACQIVKSVGDHNVLQQI 245
>gi|340709477|ref|XP_003393334.1| PREDICTED: flap endonuclease GEN-like [Bombus terrestris]
Length = 725
Score = 107 bits (266), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 21/222 (9%)
Query: 810 NASIYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQILDHE 869
+ S + D + + P YL++ T + I V +LE + L H+
Sbjct: 30 DMSCWIVDSQTVTDHSAQPKMYLRNLYFRTAFLLMQGISPVF------VLEGKAPTLKHK 83
Query: 870 YMYLGD-------EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL 922
+ + E+K + + + + EC+E+LQ+ GL + EAEA CAY+
Sbjct: 84 TIAKRNDVRSGFREKKTASKGGRTQFNRILNECKEMLQLMGLACVQGHGEAEAMCAYLNE 143
Query: 923 ANLVDGVVTDDSDVFLFGARSVYKNIFDDRK--------YVETYFMQDIEKDLGLTREKL 974
LVDG ++ DSD FL+GA++VY+N + V+ Y ++ IE+ L L R K+
Sbjct: 144 DGLVDGCISQDSDCFLYGAKTVYRNFCTSTQGNRGSSGGAVDEYKLEKIERLLELGRNKM 203
Query: 975 IRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
I +ALL G DY +G++G+G A+++ +ED L + + W
Sbjct: 204 IALALLCGCDYNDGLNGVGKEAAMKLFKIVNDEDILERMKSW 245
>gi|449520116|ref|XP_004167080.1| PREDICTED: flap endonuclease GEN-like 2-like, partial [Cucumis
sativus]
Length = 299
Score = 106 bits (265), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 79/135 (58%), Gaps = 1/135 (0%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L+RN S S M E Q L G+P + A EAEAQCA + L DG T DSD FLF
Sbjct: 110 LKRNKGSEFSLMIKEAQALGLALGIPCLDAVEEAEAQCALLNSELLCDGCFTSDSDAFLF 169
Query: 940 GARSVYKNI-FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
GAR+VY++I D +V Y M DIE LG R +I ALLLGSDY++G+ G+G +A
Sbjct: 170 GARTVYRDICLGDSGHVVCYEMDDIETRLGFGRNSMITFALLLGSDYSQGVYGMGRESAC 229
Query: 999 EVVNAFPEEDGLSKF 1013
++V A + L K
Sbjct: 230 QLVKAVGDGAVLQKI 244
>gi|225453885|ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vitis vinifera]
gi|296089141|emb|CBI38844.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 106 bits (265), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 85/138 (61%), Gaps = 4/138 (2%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
+ERNAE S EC ELL++ G+P + A EAEA CA + VD +T DSD FLF
Sbjct: 110 VERNAEF--SRRVQECVELLELLGIPVLKAREEAEALCAQLNSEGHVDACITADSDAFLF 167
Query: 940 GARSVYKNIFDDRK-YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNA 997
GA+ V K + + K +E Y M DIE LGL R+ LI ++LL+G+DY G+ GIG+ A
Sbjct: 168 GAKCVIKCLRPNCKEPLECYHMSDIESGLGLKRKHLIAISLLVGNDYDLNGVQGIGLDTA 227
Query: 998 IEVVNAFPEEDGLSKFRE 1015
+ V F E++ L++ +E
Sbjct: 228 VRFVQGFSEDEILNRLQE 245
>gi|307212664|gb|EFN88367.1| Flap endonuclease GEN [Harpegnathos saltator]
Length = 741
Score = 106 bits (265), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 98/195 (50%), Gaps = 9/195 (4%)
Query: 831 YLKDSKQNTGIFATKAIENVHA-EATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSS 889
YL++ T I V E ++ + I H + E+K ++ S +
Sbjct: 51 YLRNLYFRTAFLLMHGISPVFVLEGKAPDIKHKTIIRRHNVRHGFCERKTSKKGGRSQFN 110
Query: 890 EMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF 949
+ EC+++L+ G+ I + EAEA CAY+ LVDG ++ DSD FL+GAR VY+N
Sbjct: 111 RILTECKQMLEYMGITCIQSHGEAEAMCAYLNEDGLVDGCISQDSDCFLYGARIVYRNFC 170
Query: 950 DDRK--------YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+ V+ Y M IEK L + R K+I +ALL G DY EG++G+G A++
Sbjct: 171 TSIQGNCGARGGSVDIYCMDKIEKILNIGRNKMIALALLCGCDYDEGVTGVGKEAALKFF 230
Query: 1002 NAFPEEDGLSKFREW 1016
+ + L + +EW
Sbjct: 231 KIVEDNNVLQRIQEW 245
>gi|195626660|gb|ACG35160.1| XPG I-region family protein [Zea mays]
Length = 688
Score = 106 bits (265), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 1/126 (0%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L RN S S M E + L G+P + EAEAQCA + ++L DG T DSD FLF
Sbjct: 111 LRRNKSSEFSRMIKEAKHLGLALGIPCLDGMEEAEAQCALLNFSSLCDGCFTSDSDSFLF 170
Query: 940 GARSVYKNIF-DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
GA++ Y+++F + YV Y M+DI+ LG R LI +A+LLGSDY+ G+ G G A
Sbjct: 171 GAKTFYRDVFIGEGGYVICYEMEDIQNKLGFGRNSLISLAVLLGSDYSNGVHGFGPEAAC 230
Query: 999 EVVNAF 1004
+V +
Sbjct: 231 RLVKSL 236
>gi|302769318|ref|XP_002968078.1| hypothetical protein SELMODRAFT_89678 [Selaginella moellendorffii]
gi|300163722|gb|EFJ30332.1| hypothetical protein SELMODRAFT_89678 [Selaginella moellendorffii]
Length = 552
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 80/140 (57%), Gaps = 5/140 (3%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 953
EC ELL + +P + A EAEA CA +E +VD VT DSD FL GA V + + D K
Sbjct: 121 ECVELLGLLNVPVLRATSEAEALCAELERNGVVDACVTPDSDAFLHGASCVIQTLQADIK 180
Query: 954 --YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNAFPEEDGL 1010
VE+Y DI L L RE LI +ALL+G DY GI G+G NA+ +V F +++ L
Sbjct: 181 KPLVESYLASDIRLALQLEREHLIALALLVGCDYNLRGIPGVGYSNAMRLVQHFSKDEIL 240
Query: 1011 SKFREW--IESPDPTILGKF 1028
R+W E P P ++GK
Sbjct: 241 DNLRKWGRREYPSPEVIGKL 260
>gi|297842934|ref|XP_002889348.1| hypothetical protein ARALYDRAFT_311256 [Arabidopsis lyrata subsp.
lyrata]
gi|297335190|gb|EFH65607.1| hypothetical protein ARALYDRAFT_311256 [Arabidopsis lyrata subsp.
lyrata]
Length = 590
Score = 106 bits (264), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
+ERN + E EC ELL++ +P + A EAEA CA + VD +T DSD FLF
Sbjct: 110 VERN--KLFCEWVKECVELLELLSIPVLKANGEAEALCAQLNSEGYVDACITPDSDAFLF 167
Query: 940 GARSVYKNI-FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNA 997
GA+ V K+I + R+ E Y M DIE LGL R+ LI ++LL+G+DY + G+ GIG+ A
Sbjct: 168 GAKCVIKDIKPNSREPFECYHMSDIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKA 227
Query: 998 IEVVNAFPEEDGLSKFREWIESPDPTILG 1026
+ +V F E++ L + ++ + PT+ G
Sbjct: 228 LRIVREFSEDEILERLQDIGKGLKPTVPG 256
>gi|8570440|gb|AAF76467.1|AC020622_1 Contains similarity to excision repair protein ERCC5 from Homo
sapiens gi|1082359 and contains XPG N-terminal PF|00752
and XPG I-region PF|00867 domains [Arabidopsis thaliana]
Length = 497
Score = 105 bits (263), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 87/149 (58%), Gaps = 4/149 (2%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
+ERN + SE EC ELL++ G+P + A EAEA CA + VD +T DSD FLF
Sbjct: 110 VERN--KLFSEWVRECVELLELLGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLF 167
Query: 940 GARSVYKNIF-DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNA 997
GA V K+I + R+ E Y M IE LGL R+ LI ++LL+G+DY + G+ GIG+ A
Sbjct: 168 GAMCVIKDIKPNSREPFECYHMSHIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKA 227
Query: 998 IEVVNAFPEEDGLSKFREWIESPDPTILG 1026
+ +V F E+ L + ++ P + G
Sbjct: 228 LRIVREFSEDQVLERLQDIGNGLQPAVPG 256
>gi|351699459|gb|EHB02378.1| Flap endonuclease GEN-like protein 1 [Heterocephalus glaber]
Length = 910
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
+R S + EC E+L+ G+P++ A EAEA CA++ DG +TDD D FL+G
Sbjct: 103 QRTGRSRFKLVLRECLEMLECLGVPWVQAAGEAEAMCAHLNGTGRADGCLTDDGDAFLYG 162
Query: 941 ARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNA 997
A++VY+N + + +V+ Y M I+ LGL R+ L+ +A+LLG DY + I G+G A
Sbjct: 163 AQTVYRNFTMNAQDPHVDCYTMSSIKNKLGLDRDALVGLAILLGCDYLPKAIPGVGKEQA 222
Query: 998 IEVVNAFPEEDGLSKFREWIE 1018
+ ++ E L +F +W E
Sbjct: 223 LTLIQILKGESLLQRFNQWNE 243
>gi|255541446|ref|XP_002511787.1| DNA binding protein, putative [Ricinus communis]
gi|223548967|gb|EEF50456.1| DNA binding protein, putative [Ricinus communis]
Length = 609
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 86/143 (60%), Gaps = 4/143 (2%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +ERN + + EC ELL++FG+P + A EAEA CA + LVD +T DS
Sbjct: 105 EEGVSVERNGAFL--KCVKECVELLELFGMPVLKANGEAEALCAQLNSQGLVDACITADS 162
Query: 935 DVFLFGARSVYKNIFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGI 992
D FLFGA+ V K+I + K E Y M DIE L L R+ LI +ALL+G+D+ G+ GI
Sbjct: 163 DAFLFGAKCVIKSIKPNSKEPFECYQMSDIESGLALKRKHLIAIALLVGNDHDLNGVQGI 222
Query: 993 GIVNAIEVVNAFPEEDGLSKFRE 1015
G+ A+ V F E++ L+ RE
Sbjct: 223 GVDTALRFVQTFHEDEILNCLRE 245
>gi|303390841|ref|XP_003073651.1| Rad2 [Encephalitozoon intestinalis ATCC 50506]
gi|303302798|gb|ADM12291.1| Rad2 [Encephalitozoon intestinalis ATCC 50506]
Length = 558
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Query: 896 QELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYV 955
+++L++F + Y+ AP EA+AQC +M N VDGV+T+D+DV L+G +VY+N F + +
Sbjct: 389 KDILEVFNISYVEAPSEADAQCGFMCRNNTVDGVITEDNDVLLYGG-TVYRNFFRRDRGI 447
Query: 956 ETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
E Y ++ I+K+L L R+ LI ++ LLGSDYT G+ GIG V A+E V
Sbjct: 448 EKYSLERIKKELNLDRKNLIELSYLLGSDYTLGVKGIGPVKALEAV 493
>gi|334182222|ref|NP_171691.2| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
gi|357529503|sp|Q9LPD2.3|GENL1_ARATH RecName: Full=Flap endonuclease GEN-like 1
gi|332189224|gb|AEE27345.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
Length = 599
Score = 105 bits (262), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 87/149 (58%), Gaps = 4/149 (2%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
+ERN + SE EC ELL++ G+P + A EAEA CA + VD +T DSD FLF
Sbjct: 110 VERN--KLFSEWVRECVELLELLGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLF 167
Query: 940 GARSVYKNIF-DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNA 997
GA V K+I + R+ E Y M IE LGL R+ LI ++LL+G+DY + G+ GIG+ A
Sbjct: 168 GAMCVIKDIKPNSREPFECYHMSHIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKA 227
Query: 998 IEVVNAFPEEDGLSKFREWIESPDPTILG 1026
+ +V F E+ L + ++ P + G
Sbjct: 228 LRIVREFSEDQVLERLQDIGNGLQPAVPG 256
>gi|401828649|ref|XP_003888038.1| DNA repair flap endonuclease [Encephalitozoon hellem ATCC 50504]
gi|392999112|gb|AFM99057.1| DNA repair flap endonuclease [Encephalitozoon hellem ATCC 50504]
Length = 564
Score = 105 bits (261), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
Query: 895 CQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKY 954
+++L +F + Y+ AP EA++QC +M +N+VDGV+T+D+DV L+G ++++N F +
Sbjct: 394 IKDVLDVFNISYVDAPTEADSQCGFMCYSNIVDGVITEDNDVLLYGG-TIFRNFFRKDRE 452
Query: 955 VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+E Y ++ IE++L L R+ LI ++ LLGSDYT G+ GIG V A++ V
Sbjct: 453 IEKYSLEKIEEELKLDRKNLIELSHLLGSDYTPGVRGIGPVKALDAV 499
>gi|350420439|ref|XP_003492509.1| PREDICTED: flap endonuclease GEN-like [Bombus impatiens]
Length = 724
Score = 104 bits (260), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 108/220 (49%), Gaps = 21/220 (9%)
Query: 812 SIYDTDIEQKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQILDHEYM 871
S + D + + P YL++ T + I V +LE + L H+ +
Sbjct: 32 SCWIVDSQTVTDHSAQPKMYLRNLYFRTAFLLMQGISPVF------VLEGKAPTLKHKTI 85
Query: 872 YLGD-------EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELAN 924
+ E+K + + + + EC+E+LQ+ GL + EAEA CAY+
Sbjct: 86 AKRNDVRSGFREKKTASKGGRTQFNRILNECKEMLQLMGLACVQGHGEAEAMCAYLNEDG 145
Query: 925 LVDGVVTDDSDVFLFGARSVYKNIFDDRK--------YVETYFMQDIEKDLGLTREKLIR 976
LVDG ++ DSD FL+GA+ VY+N + V+ Y ++ IE+ L L R K+I
Sbjct: 146 LVDGCISQDSDCFLYGAKVVYRNFCTSTQGNRGSSGGAVDEYKLEKIERLLELGRNKMIA 205
Query: 977 MALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
+ALL G DY +G++G+G A+++ ++D L + + W
Sbjct: 206 LALLCGCDYNDGLNGVGKEAAMKLFKIVNDKDILQRMKSW 245
>gi|294909525|ref|XP_002777787.1| hypothetical protein Pmar_PMAR008722 [Perkinsus marinus ATCC 50983]
gi|239885749|gb|EER09582.1| hypothetical protein Pmar_PMAR008722 [Perkinsus marinus ATCC 50983]
Length = 937
Score = 103 bits (258), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
Query: 866 LDHEYMYLGDEQKKLERNAESVSSEMFAE-CQELLQMFGLPYIIAPMEAEAQCAYMELAN 924
L E L D KL + V E Q LL FG+P++ AP EAEAQC +
Sbjct: 734 LRVEEKLLEDNVNKLAKQQTEVDFRALKEDIQLLLTAFGIPWVDAPCEAEAQCVALVRNG 793
Query: 925 LVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYF---MQDIEKDLGLTREKLIRMALLL 981
L DGV++DDSD ++GA V + ++ D YVE Y M D +D + ++ +A+LL
Sbjct: 794 LADGVISDDSDTLMYGAEVVLRRLYFDAMYVEMYSSSRMPDRLRD----HDAMVSLAMLL 849
Query: 982 GSDYTEGISGIGIVNAIEVVNA 1003
G DYT G+ GIG VNA+E++ A
Sbjct: 850 GCDYTPGVLGIGAVNALEIIQA 871
>gi|307184932|gb|EFN71197.1| Flap endonuclease GEN [Camponotus floridanus]
Length = 738
Score = 103 bits (258), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 79/133 (59%), Gaps = 7/133 (5%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
+ EC+E+L+ G+ + + EAEA CAY+ LVDG V+ DSD FL+GA+ VY+N
Sbjct: 113 VLNECKEMLKFMGIACVQSYGEAEAMCAYLNENGLVDGCVSQDSDCFLYGAKIVYRNFCT 172
Query: 951 DR-------KYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNA 1003
+ ++ Y M+ IEK L + R K+I +ALL G DY+EG++G+G A++
Sbjct: 173 SKGNNGATAGSIDVYNMEKIEKTLNIGRNKMIVLALLCGCDYSEGVNGVGKEAALKFFKT 232
Query: 1004 FPEEDGLSKFREW 1016
+E+ L + + W
Sbjct: 233 VDDENVLQRIQNW 245
>gi|405964237|gb|EKC29743.1| Flap endonuclease GEN-like protein 1 [Crassostrea gigas]
Length = 417
Score = 103 bits (258), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 80/134 (59%), Gaps = 9/134 (6%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 953
+C E+L+ GLP I AP EAEA CA+++ LVDGV+T DSD L+GAR+ FD
Sbjct: 47 KCFEVLKCLGLPCIKAPGEAEAYCAWLDENGLVDGVLTSDSDALLYGART-----FD--Y 99
Query: 954 YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFP--EEDGLS 1011
V+ Y M IE+ LG+TRE L+ MA+L+G DY EGI IGI A E+ +D +
Sbjct: 100 AVDLYEMSVIEERLGMTRETLVAMAMLVGCDYDEGIRDIGIEKAQELFRELRSNHKDPFT 159
Query: 1012 KFREWIESPDPTIL 1025
+ W E+ + L
Sbjct: 160 RIMSWRENQELKTL 173
>gi|389603118|ref|XP_001568459.2| putative DNA repair protein RAD2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505733|emb|CAM43572.2| putative DNA repair protein RAD2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1029
Score = 103 bits (257), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 78/134 (58%), Gaps = 13/134 (9%)
Query: 897 ELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVE 956
ELL G+PY+++P EA+AQCA++ LVD V T+DSDV + GA +V + F K+V
Sbjct: 743 ELLDCCGVPYVLSPAEADAQCAFLARRGLVDAVFTEDSDVLVHGATTVLRGFFSQSKHVV 802
Query: 957 TYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIE-VVNAFP----EEDG-- 1009
Y + G+T+ L+ +A LLG DY EGISGIG+V A++ +V A+ EDG
Sbjct: 803 AYEQTHLSA-CGITKTVLVALASLLGCDYAEGISGIGLVGALKALVVAWTAAENAEDGAA 861
Query: 1010 -----LSKFREWIE 1018
L R W +
Sbjct: 862 SSSAVLHVLRRWAQ 875
>gi|401429746|ref|XP_003879355.1| putative DNA repair protein RAD2 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495605|emb|CBZ30910.1| putative DNA repair protein RAD2 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 930
Score = 103 bits (256), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 897 ELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVE 956
ELL G+PY+++P EA+AQCA++ LVD V T+DSDV + GA +V + F K V
Sbjct: 644 ELLDCCGVPYVLSPAEADAQCAFLARCGLVDAVFTEDSDVLVHGATTVLRGFFAQSKNVV 703
Query: 957 TYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
Y + G+T+ L+ +A LLG DYTEG+ GIG+V A+E +
Sbjct: 704 AYEQTHLSA-CGITKTVLVALASLLGCDYTEGVCGIGLVGALEAL 747
>gi|398023565|ref|XP_003864944.1| DNA repair protein RAD2, putative [Leishmania donovani]
gi|322503180|emb|CBZ38264.1| DNA repair protein RAD2, putative [Leishmania donovani]
Length = 930
Score = 103 bits (256), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 897 ELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVE 956
ELL G+PY+++P EA+AQCA++ LVD V T+DSDV + GA +V + F K V
Sbjct: 644 ELLDCCGVPYVLSPAEADAQCAFLARCGLVDAVFTEDSDVLVHGATTVLRGFFAQSKNVV 703
Query: 957 TYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
Y + G+T+ L+ +A LLG DYTEG+ GIG+V A+E +
Sbjct: 704 AYEQTHLSA-CGITKTVLVALASLLGCDYTEGVCGIGLVGALEAL 747
>gi|146101653|ref|XP_001469167.1| putative DNA repair protein RAD2 [Leishmania infantum JPCM5]
gi|134073536|emb|CAM72269.1| putative DNA repair protein RAD2 [Leishmania infantum JPCM5]
Length = 930
Score = 103 bits (256), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Query: 897 ELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVE 956
ELL G+PY+++P EA+AQCA++ LVD V T+DSDV + GA +V + F K V
Sbjct: 644 ELLDCCGVPYVLSPAEADAQCAFLARCGLVDAVFTEDSDVLVHGATTVLRGFFAQSKNVV 703
Query: 957 TYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
Y + G+T+ L+ +A LLG DYTEG+ GIG+V A+E +
Sbjct: 704 AYEQTHLSA-CGITKTVLVALASLLGCDYTEGVCGIGLVGALEAL 747
>gi|341882846|gb|EGT38781.1| hypothetical protein CAEBREN_21263 [Caenorhabditis brenneri]
Length = 809
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 86/149 (57%), Gaps = 17/149 (11%)
Query: 866 LDHEYMYL---GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL 922
L EY++L GD+ K + E++ + QE L G+P+I AP EAEAQC +E
Sbjct: 429 LADEYIHLNYDGDDDK---------TPELYRDLQEFLTNAGIPWIEAPGEAEAQCVELER 479
Query: 923 ANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIE-----KDLGLTREKLIRM 977
LVDGVV+DDSDV+ FG + VY+++F + V+ Y + K L RE + +
Sbjct: 480 LGLVDGVVSDDSDVWAFGVKHVYRHMFSKNRKVQRYGERTTANRENCKLFCLEREDYVSI 539
Query: 978 ALLLGSDYTEGISGIGIVNAIEVVNAFPE 1006
ALL G DY+ G+ +G + A+E+V+ F E
Sbjct: 540 ALLSGGDYSSGLYKVGAIGALELVSEFVE 568
>gi|124360865|gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago truncatula]
Length = 547
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 886 SVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVY 945
S S EC EL ++ G+P + A EAEA CA + VD +T DSD FLFGA+ +
Sbjct: 49 STFSRCVQECVELAKLLGIPVLKAKGEAEALCAQLNSEGHVDACITPDSDAFLFGAKCII 108
Query: 946 KNIFDDRK-YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNA 1003
K+ + K E Y M DIE LGL R+ LI ++LL+G+D+ G+ GIGI +A+ V A
Sbjct: 109 KSFSPNSKEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDLSGVQGIGIDSALRFVQA 168
Query: 1004 FPEEDGLSKFRE 1015
F E+D L++ E
Sbjct: 169 FGEDDILNRLHE 180
>gi|268568094|ref|XP_002640157.1| C. briggsae CBR-XPG-1 protein [Caenorhabditis briggsae]
Length = 886
Score = 102 bits (255), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 77/125 (61%), Gaps = 5/125 (4%)
Query: 888 SSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKN 947
+ E++ + QE L G+P+I AP EAEAQC +E LVDGVV+DDSDV+ FG + VY++
Sbjct: 468 TPELYRDLQEFLTNAGIPWIEAPGEAEAQCVELEKLGLVDGVVSDDSDVWAFGVKHVYRH 527
Query: 948 IFDDRKYVETYFMQ-----DIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+F + V+ Y Q D K L RE I +A+L G DY G+ +G + A+E+V+
Sbjct: 528 MFAKNRRVQRYGEQTAANRDNCKLFCLQREDYISIAILAGGDYCPGLVKVGAIGALELVS 587
Query: 1003 AFPEE 1007
F E+
Sbjct: 588 EFVEK 592
>gi|332029054|gb|EGI69068.1| Flap endonuclease GEN [Acromyrmex echinatior]
Length = 736
Score = 102 bits (254), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 96/182 (52%), Gaps = 15/182 (8%)
Query: 850 VHAEATEKILEEEMQILDHEYMYLGD-------EQKKLERNAESVSSEMFAECQELLQMF 902
VH +LE + IL H+ + + E+K ++ + + + EC+ELL+
Sbjct: 59 VHGIFPVFVLEGKPPILKHKTIARRNDVRSRFQERKTAKKGGRTQFNRVLNECKELLRYM 118
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK--------Y 954
G+ + + EAEA CAY+ LVDG ++ DSD FL+GA+ VY+N
Sbjct: 119 GVACVQSYGEAEAMCAYLNEDGLVDGCISQDSDCFLYGAKVVYRNFCMSTHGNCGATGGS 178
Query: 955 VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFR 1014
V+ Y M+ IEK L + R K+I +ALL G DY EG++G+G ++ EE+ L + +
Sbjct: 179 VDVYSMEKIEKTLNIGRNKMIALALLCGCDYDEGVNGVGKEATLKFFKTVKEENVLQRIQ 238
Query: 1015 EW 1016
+W
Sbjct: 239 DW 240
>gi|422293199|gb|EKU20499.1| DNA excision repair protein ERCC-5, partial [Nannochloropsis
gaditana CCMP526]
Length = 120
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 57/71 (80%)
Query: 877 QKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV 936
+K R+AE+VS EM + LLQ+FG+PY++APMEAEAQCA +E LVDGVV+DDSD
Sbjct: 50 MRKELRDAETVSQEMREDIMHLLQLFGVPYLVAPMEAEAQCAVLETLGLVDGVVSDDSDS 109
Query: 937 FLFGARSVYKN 947
FLFGAR+VYKN
Sbjct: 110 FLFGARAVYKN 120
>gi|357507117|ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago truncatula]
gi|124360235|gb|ABN08248.1| Helix-hairpin-helix motif, class 2 [Medicago truncatula]
gi|355498862|gb|AES80065.1| Flap endonuclease GEN-like protein [Medicago truncatula]
Length = 612
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Query: 886 SVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVY 945
S S EC EL ++ G+P + A EAEA CA + VD +T DSD FLFGA+ +
Sbjct: 114 STFSRCVQECVELAKLLGIPVLKAKGEAEALCAQLNSEGHVDACITPDSDAFLFGAKCII 173
Query: 946 KNIFDDRK-YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNA 1003
K+ + K E Y M DIE LGL R+ LI ++LL+G+D+ G+ GIGI +A+ V A
Sbjct: 174 KSFSPNSKEPFECYNMSDIEAGLGLKRKHLIAISLLVGNDHDLSGVQGIGIDSALRFVQA 233
Query: 1004 FPEEDGLSKFRE 1015
F E+D L++ E
Sbjct: 234 FGEDDILNRLHE 245
>gi|389595061|ref|XP_003722753.1| putative DNA repair protein RAD2 [Leishmania major strain Friedlin]
gi|323363981|emb|CBZ12987.1| putative DNA repair protein RAD2 [Leishmania major strain Friedlin]
Length = 931
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 66/105 (62%), Gaps = 1/105 (0%)
Query: 897 ELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVE 956
ELL G+PY+++P EA+AQCA++ LVD V T+DSDV + GA V + F K V
Sbjct: 645 ELLDCCGVPYVLSPAEADAQCAFLARCGLVDAVFTEDSDVLVHGATRVLRGFFAQSKNVV 704
Query: 957 TYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
Y + G+T+ L+ +A LLG DYTEG+ GIG+V A+E +
Sbjct: 705 AYEQTHLSA-CGITKTVLVALASLLGCDYTEGVCGIGLVGALEAL 748
>gi|392885946|ref|NP_491891.2| Protein XPG-1 [Caenorhabditis elegans]
gi|351063324|emb|CCD71482.1| Protein XPG-1 [Caenorhabditis elegans]
Length = 820
Score = 102 bits (253), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 77/124 (62%), Gaps = 5/124 (4%)
Query: 888 SSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKN 947
+ E++ + QE L G+P+I +P EAEAQC +E LVDGVV+DDSDV+ FGA+ VY++
Sbjct: 465 TPELYRDLQEFLTNAGIPWIESPGEAEAQCVELERLGLVDGVVSDDSDVWAFGAQHVYRH 524
Query: 948 IFDDRKYVETYFMQ-----DIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+F + V+ Y Q D K L RE I +ALL G DY G+ +G + A+E+V+
Sbjct: 525 MFSKNRRVQRYGEQTTANRDNCKLFCLQREDYISIALLSGGDYCAGLVKVGAIGALELVS 584
Query: 1003 AFPE 1006
+ E
Sbjct: 585 EYVE 588
>gi|341885112|gb|EGT41047.1| hypothetical protein CAEBREN_21721 [Caenorhabditis brenneri]
Length = 833
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 85/149 (57%), Gaps = 17/149 (11%)
Query: 866 LDHEYMYL---GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL 922
L EY++L GD+ K + E++ + QE L G+P+I AP EAEAQC +E
Sbjct: 456 LADEYIHLNYDGDDDK---------TPELYRDLQEFLTNAGIPWIEAPGEAEAQCVELER 506
Query: 923 ANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKD-----LGLTREKLIRM 977
LVDGVV+DDSDV+ FG + VY+++F + V+ Y + L RE + +
Sbjct: 507 LGLVDGVVSDDSDVWAFGVKHVYRHMFSKNRKVQRYGERTTANRKNCNLFCLEREDYVSI 566
Query: 978 ALLLGSDYTEGISGIGIVNAIEVVNAFPE 1006
ALL G DY+ G+ +G + A+E+V+ F E
Sbjct: 567 ALLSGGDYSSGLYKVGAIGALELVSEFVE 595
>gi|334182224|ref|NP_001184887.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
gi|332189225|gb|AEE27346.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
Length = 598
Score = 101 bits (252), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 87/149 (58%), Gaps = 5/149 (3%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
+ERN + SE EC ELL++ G+P + A EAEA CA + VD +T DSD FLF
Sbjct: 110 VERN--KLFSEWVREC-ELLELLGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLF 166
Query: 940 GARSVYKNIF-DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNA 997
GA V K+I + R+ E Y M IE LGL R+ LI ++LL+G+DY + G+ GIG+ A
Sbjct: 167 GAMCVIKDIKPNSREPFECYHMSHIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKA 226
Query: 998 IEVVNAFPEEDGLSKFREWIESPDPTILG 1026
+ +V F E+ L + ++ P + G
Sbjct: 227 LRIVREFSEDQVLERLQDIGNGLQPAVPG 255
>gi|300706556|ref|XP_002995534.1| hypothetical protein NCER_101536 [Nosema ceranae BRL01]
gi|239604679|gb|EEQ81863.1| hypothetical protein NCER_101536 [Nosema ceranae BRL01]
Length = 563
Score = 101 bits (251), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 81/127 (63%), Gaps = 3/127 (2%)
Query: 896 QELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYV 955
+++L++F +PY+ +P E++AQCA + + +VDGV+T+DSD+ L G VYKN F KY+
Sbjct: 396 KDILKIFNMPYLDSPSESDAQCASLCKSGVVDGVITEDSDILLHGG-VVYKNFFRKNKYI 454
Query: 956 ETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNA--FPEEDGLSKF 1013
Y + I + +GL+ LI + +LGSDYT GI GIGI A+E + + F D + +
Sbjct: 455 TKYDPKKIYEVMGLSLNDLISLGYILGSDYTVGIKGIGIKKAVEYIKSEDFKNLDIKNYY 514
Query: 1014 REWIESP 1020
+++ P
Sbjct: 515 NIYLQCP 521
>gi|308473689|ref|XP_003099068.1| CRE-XPG-1 protein [Caenorhabditis remanei]
gi|308267722|gb|EFP11675.1| CRE-XPG-1 protein [Caenorhabditis remanei]
Length = 828
Score = 100 bits (250), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 76/124 (61%), Gaps = 5/124 (4%)
Query: 888 SSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKN 947
+ E++ + QE L G+P+I AP EAEAQC +E LVDGVV+DDSDV+ FG + VY++
Sbjct: 468 TPELYRDLQEFLTNAGIPWIEAPGEAEAQCVELERLGLVDGVVSDDSDVWAFGVKHVYRH 527
Query: 948 IFDDRKYVETYFMQDIE-----KDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+F + V+ Y + + L RE I +ALL G DY+ G+ +G + A+E+V+
Sbjct: 528 MFAKNRRVQRYGEKTAANRENCRLFCLQREDFISIALLSGGDYSSGLVKVGAIGALELVS 587
Query: 1003 AFPE 1006
F E
Sbjct: 588 EFVE 591
>gi|328792793|ref|XP_001120033.2| PREDICTED: flap endonuclease GEN-like [Apis mellifera]
Length = 713
Score = 100 bits (250), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 85/149 (57%), Gaps = 8/149 (5%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+K +++ + ++ EC+E+L+ GL + EAEA CAY+ LVDG ++ DSD
Sbjct: 97 EKKSIQKKGRTQFKKILNECKEMLEYMGLACVQGHGEAEAMCAYLNEDGLVDGCISQDSD 156
Query: 936 VFLFGARSVYKNIFDDRK--------YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE 987
FL+GA+ VY+N + V+ Y ++ IEK L L R K+I +ALL G DY +
Sbjct: 157 CFLYGAKVVYRNFCTSAQGNRGGTGGAVDEYRLEKIEKVLQLGRNKMIVLALLCGCDYDD 216
Query: 988 GISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
G++G+G A+++ +D + + + W
Sbjct: 217 GLNGVGKEAAMKLFKIVENKDIIERIKNW 245
>gi|356532054|ref|XP_003534589.1| PREDICTED: flap endonuclease GEN-like 1-like [Glycine max]
Length = 607
Score = 100 bits (249), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 86/151 (56%), Gaps = 9/151 (5%)
Query: 874 GDEQKKLERNAESVSSE---MFA----ECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
G E L E VS+E +F+ EC EL+++ G+P + A EAEA CA + V
Sbjct: 96 GIELANLPVPEEGVSAERNRLFSSHVQECAELVELLGMPVLKAKGEAEALCAQLNSEGHV 155
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRK-YVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
D +T DSD FLFGA+ + K + K E Y M DIE LGL R+ LI ++LL+G D+
Sbjct: 156 DACITADSDAFLFGAKCIIKCFCPNSKEPFECYNMSDIEAGLGLKRKHLIAISLLVGDDH 215
Query: 986 -TEGISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
G+ GIG+ A+ V AF E+D L++ E
Sbjct: 216 DINGVRGIGLDTALHFVKAFSEDDILNRLHE 246
>gi|449454486|ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
gi|449472478|ref|XP_004153607.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
gi|449516535|ref|XP_004165302.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
Length = 606
Score = 100 bits (249), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 77/124 (62%), Gaps = 2/124 (1%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 953
EC ELL++FG+P + A EAEA CA + VD +T DSD FLFGA+ V K+ + K
Sbjct: 122 ECVELLELFGVPVLEAKGEAEALCAELNQKGFVDACITADSDAFLFGAKCVIKSFNPNSK 181
Query: 954 -YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNAFPEEDGLS 1011
+E YFM DIE LG R LI ++LL+G+D+ G+ G+G+ A+ V + +++ L+
Sbjct: 182 EPLECYFMSDIEAALGFNRNHLIAISLLVGNDHDLNGVQGVGLDTAVCFVQDYTDDEILN 241
Query: 1012 KFRE 1015
K E
Sbjct: 242 KLYE 245
>gi|242045348|ref|XP_002460545.1| hypothetical protein SORBIDRAFT_02g030290 [Sorghum bicolor]
gi|241923922|gb|EER97066.1| hypothetical protein SORBIDRAFT_02g030290 [Sorghum bicolor]
Length = 590
Score = 100 bits (248), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 77/125 (61%), Gaps = 4/125 (3%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC ELL+ G+P + A EAEA CA + VD +T DSD FLFGA++V K +F +
Sbjct: 131 ECVELLEYLGMPVLRAKGEAEALCAQLNNEGHVDACITADSDAFLFGAKTVVK-VFRSNC 189
Query: 952 RKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNAFPEEDGL 1010
++ E Y + DIE LGL R++++ MALL+GSD+ G+ G G+ A+ V F E++ L
Sbjct: 190 KEPFECYHIADIESGLGLKRKQMVAMALLIGSDHDLHGVPGFGLETALRFVQLFDEDEIL 249
Query: 1011 SKFRE 1015
K E
Sbjct: 250 DKLHE 254
>gi|293334819|ref|NP_001169528.1| uncharacterized protein LOC100383402 [Zea mays]
gi|224029901|gb|ACN34026.1| unknown [Zea mays]
gi|414886336|tpg|DAA62350.1| TPA: hypothetical protein ZEAMMB73_316768 [Zea mays]
Length = 638
Score = 98.2 bits (243), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 80/138 (57%), Gaps = 3/138 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 953
EC ELL+ G+P + A EAEA CA + V +T DSD FLFGA++V K + + K
Sbjct: 131 ECVELLEYLGMPVLRAKGEAEALCAQLNNEGHVGACITADSDAFLFGAKTVVKVLRSNCK 190
Query: 954 -YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNAFPEEDGLS 1011
E Y + DIE LGL R++L+ MALL+GSD+ G+ G G+ A+ V F E++ L
Sbjct: 191 EPFECYHIADIESGLGLKRKQLVAMALLIGSDHDLHGVPGFGLETALRFVQLFDEDEILD 250
Query: 1012 KFREWIESPDPTILGKFD 1029
K E + P + G FD
Sbjct: 251 KLHEIGKGVYPFLKG-FD 267
>gi|256052789|ref|XP_002569934.1| xp-G/rad2 DNA repair endonuclease family member [Schistosoma mansoni]
Length = 828
Score = 98.2 bits (243), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 9/143 (6%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
S++ EC +LL FG+P++ +P EAEA CA++ LVD +T+D D FL+GA +VY++
Sbjct: 109 SKVSQECIQLLNSFGIPWVQSPGEAEAMCAFLNSNKLVDACITNDGDAFLYGAETVYRHF 168
Query: 949 FDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNAFP 1005
D + V + M I L LT+ L+ + +LLG DY G+S +G V A+ ++++
Sbjct: 169 SMDSRDSSVCVFHMHRILDVLNLTKCDLVLLGILLGCDYWASGVSRLGPVGALRLISSLK 228
Query: 1006 ------EEDGLSKFREWIESPDP 1022
+E L KF W+ S P
Sbjct: 229 SPSLHVDEHFLIKFLSWLTSTCP 251
>gi|414590012|tpg|DAA40583.1| TPA: hypothetical protein ZEAMMB73_816984 [Zea mays]
Length = 636
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 953
EC ELL+ G+P + A EAEA CA + VD +T DSD FL+GA++V K + + K
Sbjct: 131 ECVELLEYLGMPVLRANGEAEALCAQLNSEGHVDACITADSDAFLYGAKTVVKVLRSNCK 190
Query: 954 -YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNAFPEEDGLS 1011
E Y + DIE LGL R++++ MALL+GSD+ G+ G G+ A+ V F E++ L
Sbjct: 191 EPFECYHIADIESGLGLKRKQMVAMALLIGSDHDLHGVPGFGLETALRFVQLFDEDEILD 250
Query: 1012 KFRE 1015
K E
Sbjct: 251 KLHE 254
>gi|168064381|ref|XP_001784141.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664341|gb|EDQ51065.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 435
Score = 97.8 bits (242), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 953
EC ELL++ G+P + A EAE CA ++ LVD VT DSD FL GAR V K + D K
Sbjct: 124 ECVELLELLGMPVLHAAWEAEGLCAELDRDGLVDACVTADSDAFLHGARCVIKVLQMDSK 183
Query: 954 --YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIEVVNA 1003
+ETY +DI+ LGL RE +I +ALL+G DY +G+ GIG AI +V +
Sbjct: 184 VPIIETYDAEDIKTILGLDREHMIALALLMGCDYNKKGVVGIGCNRAIRLVRS 236
>gi|383854420|ref|XP_003702719.1| PREDICTED: flap endonuclease GEN-like [Megachile rotundata]
Length = 717
Score = 97.4 bits (241), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 76/134 (56%), Gaps = 8/134 (5%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
+ EC+ELL GL I EAEA CA++ LV G ++ DSD FL+GA+ VY+N
Sbjct: 112 ILKECKELLGYMGLACIQGQGEAEAMCAHLNEDGLVHGCISQDSDCFLYGAKVVYRNFCT 171
Query: 951 DRK--------YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+ V+ Y ++ IEK L L R K+I +ALL G DY EG++G+G A+++
Sbjct: 172 SAQGNRGGTGGAVDEYSIEKIEKALDLGRNKMIALALLCGCDYDEGLNGVGKEAAMKLFK 231
Query: 1003 AFPEEDGLSKFREW 1016
+ED + + + W
Sbjct: 232 IVKDEDIIERLKSW 245
>gi|443725425|gb|ELU13028.1| hypothetical protein CAPTEDRAFT_123501, partial [Capitella teleta]
Length = 206
Score = 97.1 bits (240), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 71/105 (67%), Gaps = 3/105 (2%)
Query: 892 FAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDD 951
F +C ELL + G+P++ + EAEA CA + +VD V+T+D D FL+GAR VY+N +
Sbjct: 78 FIQCCELLDLLGVPHVQSSGEAEAMCAQLNKEKVVDAVITNDGDAFLYGARKVYRNFTMN 137
Query: 952 RK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIG 993
K +VE+Y M +IE L L R+ L+ +ALLLG DY +G++G+G
Sbjct: 138 TKDPHVESYCMDEIEDKLSLDRKTLVALALLLGCDYAPQGVAGVG 182
>gi|340056397|emb|CCC50728.1| putative DNA repair protein RAD2 [Trypanosoma vivax Y486]
Length = 753
Score = 96.7 bits (239), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 953
E ELL G+P+II+P EA+AQCAY+ LVD V T+DSDV + GA +V + F +
Sbjct: 475 EIVELLDCCGIPFIISPNEADAQCAYLNSQRLVDAVFTEDSDVIVHGAPTVLRGFFSGNR 534
Query: 954 YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
V Y D+ G+ + L+ +A+LLG DY EG+ G+ ++ A+ VV
Sbjct: 535 QVVAYHQSDL-LTCGVDKSVLVALAILLGCDYAEGVHGLSLLEALHVV 581
>gi|297816098|ref|XP_002875932.1| hypothetical protein ARALYDRAFT_485245 [Arabidopsis lyrata subsp.
lyrata]
gi|297321770|gb|EFH52191.1| hypothetical protein ARALYDRAFT_485245 [Arabidopsis lyrata subsp.
lyrata]
Length = 600
Score = 96.7 bits (239), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L+RN S S + E + + G+ + EAEAQCA + +L D + DSD+FLF
Sbjct: 110 LKRNMGSEFSCIIKEAKVIASTLGILCLDGIEEAEAQCALLNSESLCDACFSSDSDIFLF 169
Query: 940 GARSVYKNI-FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
GA++VY+ I + YV Y M DI+K LGL R LI +ALLLGSDY++G+ G+ A
Sbjct: 170 GAKTVYREICLGEGGYVVCYEMDDIKKKLGLGRNSLIALALLLGSDYSQGVRGLRQEKAC 229
Query: 999 EVVNAFPEEDGLSK 1012
E+V + E L K
Sbjct: 230 ELVRSIGENVILEK 243
>gi|63098616|gb|AAY32559.1| single strand DNA repair-like protein [Triticum monococcum]
Length = 646
Score = 96.3 bits (238), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
RNA + + +C ELL+ G+P + A EAEA CA + VD +T DSD FLFGA
Sbjct: 122 RNA--IFTRCVKDCVELLKNLGMPVLWAKGEAEALCAQLNNEGEVDACITSDSDAFLFGA 179
Query: 942 RSVYKNIFDDRK-YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIE 999
++V K + + K E Y + DIE +GL R++++ MALL+GSD+ G+ G G+ A+
Sbjct: 180 KTVIKVMRSNCKEPFECYNIVDIESGIGLKRKQMVAMALLIGSDHDLHGVPGFGVETALR 239
Query: 1000 VVNAFPEEDGLSKFRE 1015
V F E+ L K E
Sbjct: 240 FVRLFDEDQILDKLHE 255
>gi|397584929|gb|EJK53123.1| hypothetical protein THAOC_27498, partial [Thalassiosira oceanica]
Length = 252
Score = 95.9 bits (237), Expect = 2e-16, Method: Composition-based stats.
Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 60/269 (22%)
Query: 886 SVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVY 945
+++ EM + LL++ G+P++ +P EAEAQCA +E LVDGVVT+DSD+F+FG + VY
Sbjct: 3 TITDEMKDDILRLLRLCGIPWVESPSEAEAQCAALERLGLVDGVVTEDSDIFVFGGQKVY 62
Query: 946 KNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFP 1005
K G + + R A G DYT+G+ G+GIVN +EV+ AFP
Sbjct: 63 KG-------------HRARAGPGQGQARRPRDAP--GRDYTDGVRGVGIVNGMEVLRAFP 107
Query: 1006 E--------EDGLSKFREWIES-----------PDPTILGKFDVQTGASSRKRRSSDGD- 1045
GLS+FR+W++ P+ GK S+R R ++ D
Sbjct: 108 PAADGVEGVHGGLSRFRDWMDGIGDVLPDDATPPEVAFHGKH-----RSARARWAAPADF 162
Query: 1046 -----------KDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMK------KIFMDK 1088
V+ ++ +++ +F D E + + K+
Sbjct: 163 PSRGIITAYLRPAVDTSRTRFTWARPDLDALQRFCADTLGWEREETARVVGPVLKVLEST 222
Query: 1089 HTQLRLEAF---YTFNERFAKIRSKRIKK 1114
TQ RLE++ Y N F K++ K + K
Sbjct: 223 STQTRLESYFMRYEDNVTFGKVKIKALSK 251
>gi|357159491|ref|XP_003578463.1| PREDICTED: flap endonuclease GEN-like 1-like [Brachypodium
distachyon]
Length = 639
Score = 95.9 bits (237), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 953
EC ELL G+P + A EAEA CA + VD +T DSD FLFGA++V K + + K
Sbjct: 132 ECVELLGYLGMPVLRATGEAEALCAQLNNEGHVDACITSDSDAFLFGAKTVIKVLRSNCK 191
Query: 954 -YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNAFPEEDGLS 1011
E Y + DIE +GL R++++ MALL+GSD+ G+ G G+ A+ V F E+ L
Sbjct: 192 EPFECYNIADIESGIGLKRKQMVAMALLVGSDHDLHGVPGFGVETALRFVQLFEEDHILD 251
Query: 1012 KFRE 1015
K +E
Sbjct: 252 KLKE 255
>gi|156555588|ref|XP_001605190.1| PREDICTED: flap endonuclease GEN-like [Nasonia vitripennis]
Length = 736
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 85/152 (55%), Gaps = 9/152 (5%)
Query: 874 GDEQKKLERNA-ESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
G E KK + A S + + EC+E+L+ GL + EAEA CAY+ LVDG ++
Sbjct: 94 GREIKKTNKKAGRSRFNYVLKECEEMLKYMGLTCVKGYGEAEAMCAYLNEDGLVDGCISQ 153
Query: 933 DSDVFLFGARSVYKNIFDDRK--------YVETYFMQDIEKDLGLTREKLIRMALLLGSD 984
DSD L+GA+ VY+N + ++ Y M+ I++ L R K+I +AL+ G D
Sbjct: 154 DSDCLLYGAKIVYRNFCTSTQGNRTTSSGSIDEYSMEKIQQVFNLGRNKMIALALMCGCD 213
Query: 985 YTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
Y EG+SG+G A+++ +++ L + ++W
Sbjct: 214 YDEGLSGVGKEAALKLFKIVDDDEILYRMKQW 245
>gi|110430659|gb|ABG73449.1| DNA repair protein [Oryza brachyantha]
Length = 629
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
RNA+ + EC ELL+ G+P + A E EA CA + VD +T DSD FLFGA
Sbjct: 120 RNAKF--TRYVKECVELLEYLGMPVLRAKGEGEALCAQLNNEGHVDACITSDSDAFLFGA 177
Query: 942 RSVYKNIFDD-RKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIE 999
++V K + + ++ E Y M DIE LGL R++++ MALL+GSD+ G+ G G A+
Sbjct: 178 KTVIKVLRSNCKEPFECYNMTDIESGLGLKRKQMVAMALLVGSDHDLHGVPGFGPETALR 237
Query: 1000 VVNAFPEEDGLSKFREWIESPDPTILG 1026
V F E+ L K E + P I G
Sbjct: 238 FVQLFDEDTVLDKLYEIGKGVYPFIEG 264
>gi|317374923|sp|A7UW97.2|FEN1_NEUCR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 394
Score = 95.5 bits (236), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 116/236 (49%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ+LL++ G+PYI+AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQKLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ ++ ++ + + LG+ R++ I + +LLG DY + I +G
Sbjct: 185 FNAPILLRHLTFSEQRKEPIQEIHLEKVLEGLGMERKQFIDLCILLGCDYLDPIPKVGPS 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV------- 1048
A++++ E L K EW+++ DP G++ + R+ + DV
Sbjct: 245 TALKLIR---EHGTLEKVVEWMKA-DPK--GRYQIPEDWPFEDARTLFFEPDVRPADDPL 298
Query: 1049 ---NYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ K + G+ +F F ED+ + +NMK Q R+E F+
Sbjct: 299 CDFKWDKPDIEGLIQFLVHEKGFSEDRVRSAGTKLEKNMK-----TSQQARIEGFF 349
>gi|350287839|gb|EGZ69075.1| DNA-repair protein rad2, partial [Neurospora tetrasperma FGSC 2509]
Length = 390
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 115/236 (48%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYI+AP EAEAQCA + A V ++D D
Sbjct: 121 KFSRRTVRVTREHNAECQRLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDMDTLC 180
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ ++ ++ + + LG+ R++ I + +LLG DY + I +G
Sbjct: 181 FNAPILLRHLTFSEQRKEPIQEIHLEKVLEGLGMERKQFIDLCILLGCDYLDPIPKVGPS 240
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV------- 1048
A++++ E L K EW+++ DP G++ + R+ + DV
Sbjct: 241 TALKLIR---EHGTLEKVVEWMKA-DPK--GRYQIPEDWPFEDARALFFEPDVRPADDPL 294
Query: 1049 ---NYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ K + G+ +F F ED+ + +NMK Q R+E F+
Sbjct: 295 CDFKWDKPDIEGLIQFLVHEKGFSEDRVRSAGTKLEKNMK-----TSQQARIEGFF 345
>gi|164426998|ref|XP_001728355.1| DNA-repair protein rad2 [Neurospora crassa OR74A]
gi|157071561|gb|EDO65264.1| DNA-repair protein rad2 [Neurospora crassa OR74A]
Length = 396
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 116/236 (49%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ+LL++ G+PYI+AP EAEAQCA + A V ++D D
Sbjct: 127 KFSRRTVRVTREHNAECQKLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDMDTLC 186
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ ++ ++ + + LG+ R++ I + +LLG DY + I +G
Sbjct: 187 FNAPILLRHLTFSEQRKEPIQEIHLEKVLEGLGMERKQFIDLCILLGCDYLDPIPKVGPS 246
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV------- 1048
A++++ E L K EW+++ DP G++ + R+ + DV
Sbjct: 247 TALKLIR---EHGTLEKVVEWMKA-DPK--GRYQIPEDWPFEDARTLFFEPDVRPADDPL 300
Query: 1049 ---NYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ K + G+ +F F ED+ + +NMK Q R+E F+
Sbjct: 301 CDFKWDKPDIEGLIQFLVHEKGFSEDRVRSAGTKLEKNMK-----TSQQARIEGFF 351
>gi|125564417|gb|EAZ09797.1| hypothetical protein OsI_32084 [Oryza sativa Indica Group]
Length = 630
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 78/135 (57%), Gaps = 2/135 (1%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 953
+C ELL+ G+P + A E EA CA + VD +T DSD FLFGA++V K + + K
Sbjct: 130 DCVELLEYLGMPVLRAKGEGEALCAQLNNQGHVDACITSDSDAFLFGAKTVIKVLRSNCK 189
Query: 954 -YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNAFPEEDGLS 1011
E Y M DIE LGL R++++ MALL+GSD+ G+ G G A+ V F E++ L+
Sbjct: 190 EPFECYNMADIESGLGLKRKQMVAMALLVGSDHDLHGVPGFGPETALRFVQLFDEDNVLA 249
Query: 1012 KFREWIESPDPTILG 1026
K E + P I G
Sbjct: 250 KLYEIGKGVYPFIEG 264
>gi|336467513|gb|EGO55677.1| DNA-repair protein rad2 [Neurospora tetrasperma FGSC 2508]
Length = 396
Score = 95.1 bits (235), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 115/236 (48%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYI+AP EAEAQCA + A V ++D D
Sbjct: 127 KFSRRTVRVTREHNAECQRLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDMDTLC 186
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ ++ ++ + + LG+ R++ I + +LLG DY + I +G
Sbjct: 187 FNAPILLRHLTFSEQRKEPIQEIHLEKVLEGLGMERKQFIDLCILLGCDYLDPIPKVGPS 246
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV------- 1048
A++++ E L K EW+++ DP G++ + R+ + DV
Sbjct: 247 TALKLIR---EHGTLEKVVEWMKA-DPK--GRYQIPEDWPFEDARALFFEPDVRPADDPL 300
Query: 1049 ---NYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ K + G+ +F F ED+ + +NMK Q R+E F+
Sbjct: 301 CDFKWDKPDIEGLIQFLVHEKGFSEDRVRSAGTKLEKNMK-----TSQQARIEGFF 351
>gi|75288736|sp|Q64MA3.1|GENL1_ORYSJ RecName: Full=Flap endonuclease GEN-like 1; Short=OsGEN-L;
Short=Protein OsGEN-like; AltName: Full=OsRAD
gi|52075592|dbj|BAD46702.1| putative single-strand DNA endonuclease-1 [Oryza sativa Japonica
Group]
gi|62122402|dbj|BAD93194.1| putative nuclease [Oryza sativa Japonica Group]
gi|62122736|dbj|BAD93331.1| putative nuclease [Oryza sativa Japonica Group]
gi|215693373|dbj|BAG88755.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630495|gb|EEE62627.1| hypothetical protein OsJ_17430 [Oryza sativa Japonica Group]
Length = 629
Score = 94.7 bits (234), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 953
+C ELL+ G+P + A E EA CA + VD +T DSD FLFGA++V K + + K
Sbjct: 130 DCVELLEYLGMPVLRAKGEGEALCAQLNNQGHVDACITSDSDAFLFGAKTVIKVLRSNCK 189
Query: 954 -YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNAFPEEDGLS 1011
E Y M DIE LGL R++++ MALL+GSD+ G+ G G A+ V F E++ L+
Sbjct: 190 EPFECYNMADIESGLGLKRKQMVAMALLVGSDHDLHGVPGFGPETALRFVQLFDEDNVLA 249
Query: 1012 KFRE 1015
K E
Sbjct: 250 KLYE 253
>gi|297668153|ref|XP_002812316.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease GEN homolog 1
[Pongo abelii]
Length = 912
Score = 94.7 bits (234), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 14/161 (8%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFG 940
++ S + EC +L G+P++ A E EA CAY+ + + VDG +T+D D FL
Sbjct: 103 QKTGRSHFKSVLRECLHMLXCLGIPWVQAAGEPEALCAYLIVGDHVDGCLTNDGDTFLXX 162
Query: 941 ARSVY-------KNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGI 992
Y K++ D +V+ Y M I+ LGL R+ L+ +A+LLG DY +G+ G+
Sbjct: 163 XXXXYVLFEDXTKSVLXD-PHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGV 221
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIE-----SPDPTILGKF 1028
G A++++ + L +F W E SP P + K
Sbjct: 222 GKEQALKLIQILKGQSLLQRFNRWNETSCNSSPQPLVTKKL 262
>gi|186510820|ref|NP_001118795.1| Flap endonuclease GEN-like 2 [Arabidopsis thaliana]
gi|166221584|sp|Q9M2Z3.2|GENL2_ARATH RecName: Full=Flap endonuclease GEN-like 2
gi|332644951|gb|AEE78472.1| Flap endonuclease GEN-like 2 [Arabidopsis thaliana]
Length = 600
Score = 94.4 bits (233), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 75/126 (59%), Gaps = 1/126 (0%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L+RN S S + E + + G+ + EAEAQCA + +L D + DSD+FLF
Sbjct: 110 LKRNMGSEFSCIIKEAKVIASTLGILCLDGIEEAEAQCALLNSESLCDACFSFDSDIFLF 169
Query: 940 GARSVYKNI-FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
GA++VY+ I + YV Y M DI+K LGL R LI +ALLLGSDY++G+ G+ A
Sbjct: 170 GAKTVYREICLGEGGYVVCYEMDDIKKKLGLGRNSLIALALLLGSDYSQGVRGLRQEKAC 229
Query: 999 EVVNAF 1004
E+V +
Sbjct: 230 ELVRSI 235
>gi|444731649|gb|ELW71998.1| Flap endonuclease GEN like protein 1 [Tupaia chinensis]
Length = 793
Score = 94.0 bits (232), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 2/101 (1%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
+ EC ++L+ G+P++ A EAEA CAY+ VDG +T+D D FL+GA++VY+N
Sbjct: 113 VLRECLDMLECLGIPWVQAAGEAEAMCAYLNACGYVDGCLTNDGDAFLYGAQTVYRNFTM 172
Query: 951 DRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGI 989
+ K +V+ Y M I+ LGL R+ L+ +A+LLG DY +
Sbjct: 173 NTKDPHVDCYTMSCIKDKLGLDRDALVGLAILLGCDYLPKV 213
>gi|186510818|ref|NP_190459.2| Flap endonuclease GEN-like 2 [Arabidopsis thaliana]
gi|332644950|gb|AEE78471.1| Flap endonuclease GEN-like 2 [Arabidopsis thaliana]
Length = 536
Score = 93.6 bits (231), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 75/126 (59%), Gaps = 1/126 (0%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L+RN S S + E + + G+ + EAEAQCA + +L D + DSD+FLF
Sbjct: 46 LKRNMGSEFSCIIKEAKVIASTLGILCLDGIEEAEAQCALLNSESLCDACFSFDSDIFLF 105
Query: 940 GARSVYKNI-FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
GA++VY+ I + YV Y M DI+K LGL R LI +ALLLGSDY++G+ G+ A
Sbjct: 106 GAKTVYREICLGEGGYVVCYEMDDIKKKLGLGRNSLIALALLLGSDYSQGVRGLRQEKAC 165
Query: 999 EVVNAF 1004
E+V +
Sbjct: 166 ELVRSI 171
>gi|360043194|emb|CCD78606.1| putative xp-G/rad2 DNA repair endonuclease family member [Schistosoma
mansoni]
Length = 293
Score = 93.6 bits (231), Expect = 7e-16, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
S++ EC +LL FG+P++ +P EAEA CA++ LVD +T+D D FL+GA +VY++
Sbjct: 109 SKVSQECIQLLNSFGIPWVQSPGEAEAMCAFLNSNKLVDACITNDGDAFLYGAETVYRHF 168
Query: 949 FDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNAFP 1005
D + V + M I L LT+ L+ + +LLG DY G+S +G V A+ ++++
Sbjct: 169 SMDSRDSSVCVFHMHRILDVLNLTKCDLVLLGILLGCDYWASGVSRLGPVGALRLISSLK 228
Query: 1006 ------EEDGLSKFREWIESPDPTILGKFDV 1030
+E L KF W+ S P F++
Sbjct: 229 SPSLHVDEHFLIKFLSWLTSTCPQNCEDFNL 259
>gi|313246225|emb|CBY35158.1| unnamed protein product [Oikopleura dioica]
Length = 846
Score = 93.6 bits (231), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 10/135 (7%)
Query: 888 SSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKN 947
S +++ + E+L +FG AP EAEAQCA E+ N+ G +TDD D FLFG R+V K
Sbjct: 614 SQQLYKDAAEMLTLFGCGVFFAPGEAEAQCAEFEMTNITQGTITDDGDTFLFGGRTVIKG 673
Query: 948 IFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPE- 1006
+ Y +Q+ E +RE LI +A L GSDY GI +G AI+++ F +
Sbjct: 674 LTLGNMVPVKYDIQETE----FSREFLIALAQLTGSDYCNGIKSVGSKTAIKILEEFDDR 729
Query: 1007 --ED---GLSKFREW 1016
ED L+ F +W
Sbjct: 730 RSEDPHLTLNTFSKW 744
>gi|440492480|gb|ELQ75044.1| 5'-3' exonuclease [Trachipleistophora hominis]
Length = 728
Score = 93.2 bits (230), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 84/167 (50%), Gaps = 43/167 (25%)
Query: 875 DEQKKLERNAESVSSEMFAECQ-------ELLQMFGLPYIIAPMEAEAQCAYM------- 920
D LERN + S + E Q ++L + G+PYI AP E+++Q Y+
Sbjct: 492 DRMASLERNIRTRSINLMNELQCITVLMKKMLTILGIPYIDAPYESDSQLGYLNNECELE 551
Query: 921 -------------------------ELANL-VDGVVTDDSDVFLFGARSVYKNIFDDRKY 954
++ NL VD ++T+D+DVFLFGA VYK+ F K
Sbjct: 552 RNERKSVFNPEEKCEHLDTNQVFNDKIYNLKVDAIITEDNDVFLFGANRVYKDYF---KC 608
Query: 955 VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+ Y MQ+I L L RE LI++++ LG+DYT G GIG A+E++
Sbjct: 609 PKLYTMQNIRDKLNLNREDLIKLSVFLGNDYTVGFRGIGPKKALEIL 655
>gi|321465723|gb|EFX76723.1| hypothetical protein DAPPUDRAFT_33887 [Daphnia pulex]
Length = 231
Score = 92.8 bits (229), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDD-R 952
EC ELL G+ I + EAEA CA + +V+G +T D D FL+GA++VY+N+ D
Sbjct: 68 ECTELLTALGVVTITSMGEAEAACAGLNHQGVVEGCITIDGDAFLYGAKTVYRNLSTDIH 127
Query: 953 KYV-ETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIEVVNAFP 1005
+V + Y M IE L L+R+KLI MA+L G DY +G+ G+G +A+ V++ P
Sbjct: 128 NFVCQEYSMDVIETRLNLSRDKLIAMAILFGCDYLPDGVPGVGKESALRVISTIP 182
>gi|440296320|gb|ELP89147.1| hypothetical protein EIN_485090 [Entamoeba invadens IP1]
Length = 688
Score = 92.4 bits (228), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 75/127 (59%), Gaps = 9/127 (7%)
Query: 883 NAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGAR 942
N + +S E+ E++ +P++ +P EAEAQCAY + D V ++DSDVF+FGA+
Sbjct: 456 NDQMMSLEVQNVVFEMVTALEIPHVFSPWEAEAQCAYYNKTKMCDYVASNDSDVFVFGAK 515
Query: 943 SVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+V +N D + + LT+EK I +ALLLGSD+TEG+ +G AI+++
Sbjct: 516 NVIRNFLIDGEVATIH-------TANLTQEKYIFLALLLGSDFTEGVGKVGPKRAIQIIK 568
Query: 1003 AF--PEE 1007
F PE+
Sbjct: 569 MFDTPEQ 575
>gi|193643497|ref|XP_001947849.1| PREDICTED: flap endonuclease GEN-like [Acyrthosiphon pisum]
Length = 477
Score = 92.0 bits (227), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 74/129 (57%), Gaps = 2/129 (1%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI-FDDR 952
+C+ LL + G+ + EAE CA + +V+G+VT DSD FL+GAR VY+N
Sbjct: 111 QCELLLNIMGVTCVYGHGEAEQLCAILNKNGIVNGIVTQDSDCFLYGARVVYRNFNASGN 170
Query: 953 KYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIGIVNAIEVVNAFPEEDGLS 1011
V+ Y M IEK+L + R K+I ++LL G DY E G+ GIG AI+ + + ++ L
Sbjct: 171 GSVDVYCMGSIEKNLKIGRSKMIALSLLCGCDYDEKGVLGIGKDTAIKFLQSLDDDAVLD 230
Query: 1012 KFREWIESP 1020
+ R W P
Sbjct: 231 RLRHWRNDP 239
>gi|123478601|ref|XP_001322462.1| XPG I-region family protein [Trichomonas vaginalis G3]
gi|121905309|gb|EAY10239.1| XPG I-region family protein [Trichomonas vaginalis G3]
Length = 651
Score = 91.7 bits (226), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 85/141 (60%), Gaps = 19/141 (13%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
V+++ + LL + +PYIIAP E+ A+CA +EL +VD +DD++ FLFG++ + +
Sbjct: 268 VTADHIRAVKGLLDVMDVPYIIAPEESTAECARLELEGIVDATASDDNNAFLFGSKILIR 327
Query: 947 NIF-----DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGIS----GIGIVNA 997
NIF K +E Y G+TR++L+++A+++ DY + I +G +
Sbjct: 328 NIFLRPHSITLKSLEVY---------GMTRKRLLQLAMMIDGDYNDDIKKRLFTVGPIRG 378
Query: 998 IEVVNAFPEE-DGLSKFREWI 1017
+++++ FP+E +GL +F+EW
Sbjct: 379 LKILSLFPDEKNGLFQFKEWF 399
>gi|302900157|ref|XP_003048206.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|317374915|sp|C7Z125.1|FEN1_NECH7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|256729138|gb|EEU42493.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 395
Score = 91.3 bits (225), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 116/236 (49%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYIIAP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLAQAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + + +++ F +++ ++ ++ + + LG+ R++ + + +LLG DY + I +G
Sbjct: 185 FNSPILLRHLTFSEQRKEPIQEIHLEKVLEGLGMERKQFVDLCILLGCDYLDPIPKVGPT 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK----------RRSSDGD 1045
A++++ + L K E +E DP K+ + + R++ D +
Sbjct: 245 TALKLIR---DHGSLEKIVEAMEK-DPK--KKYVLPEDWPYKDARDLFFEPDVRKADDPE 298
Query: 1046 KDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
DV + K + G+ +F + F ED+ A +N+K Q RLE F+
Sbjct: 299 CDVKWEKPDMEGLVQFLVTEKGFSEDRVRSGGARLEKNLK-----SSQQARLEGFF 349
>gi|342882941|gb|EGU83505.1| hypothetical protein FOXB_05915 [Fusarium oxysporum Fo5176]
Length = 395
Score = 90.9 bits (224), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 113/236 (47%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYIIAP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLAQAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ ++ ++ + + L + R++ + + +LLG DY + I +G
Sbjct: 185 FNAPILLRHLTFSEQRKEPIQEIHLEKVLEGLNMERKQFVDLCILLGCDYLDPIPKVGPS 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK----------RRSSDGD 1045
A++++ E L K E IE DP K+ + + R++ D
Sbjct: 245 TALKLIR---EHGSLEKVVEAIEK-DPK--KKYTIPEDWPYKDARDLFFEPDVRQADHHD 298
Query: 1046 KDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
D + K + G+ +F + F ED+ A +N+K Q RLE F+
Sbjct: 299 CDFKWEKPDMEGLVQFLVTEKGFSEDRVRSGGARLEKNLK-----SSQQARLEGFF 349
>gi|170041796|ref|XP_001848636.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167865395|gb|EDS28778.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 724
Score = 90.9 bits (224), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 78/135 (57%), Gaps = 3/135 (2%)
Query: 890 EMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF 949
+ +C+ELL GL + AP EAEA CA++ NLV G+++ DSD F +G VY+N
Sbjct: 133 HVLKQCEELLSSMGLVCVQAPGEAEALCAHLNRENLVHGIISQDSDCFAYGGVRVYRNFC 192
Query: 950 DDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIGIVNAIEVVNAFPE 1006
+ VE Y +++I + + L +EK++ M +L G DY+ G+ G+G ++ ++P
Sbjct: 193 ASQNGGSVEIYDLENIRRVMDLGQEKIVVMGILSGCDYSPAGVPGVGRELVHRLIRSYPS 252
Query: 1007 EDGLSKFREWIESPD 1021
+ L + R W ++ D
Sbjct: 253 WEILDRIRAWRKTAD 267
>gi|313217057|emb|CBY38243.1| unnamed protein product [Oikopleura dioica]
gi|313224508|emb|CBY20298.1| unnamed protein product [Oikopleura dioica]
Length = 538
Score = 90.5 bits (223), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 10/135 (7%)
Query: 888 SSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKN 947
S +++ + E+L +FG AP EAEAQCA E+ N+ G +TDD D FLFG R V K
Sbjct: 306 SQQLYKDAAEMLTLFGCGVFFAPGEAEAQCAEFEMTNITQGTITDDGDTFLFGGRIVIKG 365
Query: 948 IFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPE- 1006
+ Y +Q+ E +RE LI +A L GSDY GI +G AI+++ F +
Sbjct: 366 LTLGNMVPVKYDVQETE----FSREFLIALAQLTGSDYCNGIKSVGSKTAIKILEEFDDR 421
Query: 1007 --ED---GLSKFREW 1016
ED L+ F +W
Sbjct: 422 RSEDPHLTLNTFSKW 436
>gi|336259381|ref|XP_003344492.1| hypothetical protein SMAC_08742 [Sordaria macrospora k-hell]
gi|317376194|sp|D1ZT73.1|FEN1_SORMK RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|380087456|emb|CCC05373.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 394
Score = 90.5 bits (223), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 113/238 (47%), Gaps = 31/238 (13%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ+LL++ G+PYI+AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQKLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKD-----LGLTREKLIRMALLLGSDYTEGISGIG 993
F + +++ + E +Q+I D LG+ R++ + + +LLG DY + I +G
Sbjct: 185 FHTPILLRHLTFSEQRKEP--IQEIHTDKVLEGLGMDRKQFVDLCILLGCDYLDPIPKVG 242
Query: 994 IVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV----- 1048
A++++ E L + EW+++ DP G++ + R+ + DV
Sbjct: 243 PSTALKLIR---EHGTLEEVVEWMKA-DPK--GRYQIPEDWPFEDARALFFEPDVRPADD 296
Query: 1049 -----NYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ K + G+ +F F ED+ S + +NM+ Q R+E F+
Sbjct: 297 PLCDFKWEKPDIEGLVQFLAHEKGFSEDRVRSASIKLQKNMQ-----TSQQARIEGFF 349
>gi|187608436|ref|NP_001120251.1| Gen endonuclease homolog 1 [Xenopus (Silurana) tropicalis]
gi|169641850|gb|AAI60467.1| LOC100145302 protein [Xenopus (Silurana) tropicalis]
Length = 219
Score = 90.1 bits (222), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
+ S + EC +L+ G+P++ A EAEA CAY+ VDG +T+D DVFL+GA
Sbjct: 104 KAGRSYFKSVLKECLLMLECLGIPWVQAAGEAEAMCAYLNAHGYVDGCITNDGDVFLYGA 163
Query: 942 RSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
++ Y+N + K +V+ Y + I+ LGL RE+L+ +A+LLG DY +S
Sbjct: 164 QTFYRNFTMNVKDPHVDCYEVSKIKAQLGLDREELVGLAILLGCDYLPKVSA 215
>gi|405953608|gb|EKC21238.1| Flap endonuclease 1-A [Crassostrea gigas]
Length = 376
Score = 90.1 bits (222), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 5/133 (3%)
Query: 874 GDEQ--KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
GDE+ +K R VS + EC+ELL+ G+P+I AP EAEAQCA + A V T
Sbjct: 118 GDEENIEKFNRRLVKVSKQHNEECKELLKYMGIPFINAPGEAEAQCAALVKAGKVYATGT 177
Query: 932 DDSDVFLFGARSVYKN--IFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEG 988
+D D FG + +N + + RK ++ Y+ + ++LGLT+++ I + +LLG DY +
Sbjct: 178 EDMDALTFGTTVLLRNLTVAEARKLPIKEYYYNRVLEELGLTKDEFIDLCILLGCDYCDS 237
Query: 989 ISGIGIVNAIEVV 1001
I GIG AI+++
Sbjct: 238 IRGIGPKRAIDLI 250
>gi|407916553|gb|EKG09919.1| DNA repair protein [Macrophomina phaseolina MS6]
Length = 392
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 79/140 (56%), Gaps = 3/140 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYIIAP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDMDTLT 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + + +++ F +++ ++ + + + L + RE+ I + +LLG DY + I G+G
Sbjct: 185 FNSPVLLRHLTFSEQRKEPIQEIHLDKVLEGLEMEREQFIDLCILLGCDYLDPIKGVGPS 244
Query: 996 NAIEVVNAFPEEDGLSKFRE 1015
A+++V +G+ KF +
Sbjct: 245 TALKLVREHKNLEGVVKFMQ 264
>gi|270011949|gb|EFA08397.1| hypothetical protein TcasGA2_TC006044 [Tribolium castaneum]
Length = 591
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
Query: 895 CQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK- 953
C+E+L + GL + EAEA CA + LVDG+++ DSD F +GAR VY+N ++
Sbjct: 117 CEEMLSLLGLACVTGEGEAEALCAQLNETGLVDGIISQDSDCFAYGARVVYRNFSISQQG 176
Query: 954 -------YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPE 1006
V+ Y + + L R K+I +ALL GSDY++G+ GIG + ++ N +
Sbjct: 177 NQAAKGGSVDVYDISVANERLNFGRNKIIALALLCGSDYSDGVHGIGKDSVVKFFNLVKD 236
Query: 1007 EDGLSKFREW 1016
++ L + R W
Sbjct: 237 DEILQRLRSW 246
>gi|427786261|gb|JAA58582.1| Putative xp-g/rad2 dna repair endonuclease [Rhipicephalus pulchellus]
Length = 778
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Query: 925 LVDGVVTDDSDVFLFGARSVYKNIF--DDRKYVETYFMQDIEKDLGLTREKLIRMALLLG 982
+VDG +T D D FL+GA++VY+ + D +V +Y + DIE LGL REKL+ +A+L G
Sbjct: 1 MVDGCITQDGDAFLYGAKTVYRKLCVEDKDPHVLSYKISDIESKLGLDREKLVALAVLAG 60
Query: 983 SDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
DY G+ +G AI+++N F + L + R+W
Sbjct: 61 CDYFSGVRNVGKETAIKLLNKFGDSGSLERLRDW 94
>gi|242014497|ref|XP_002427926.1| Flap endonuclease 1-B, putative [Pediculus humanus corporis]
gi|212512410|gb|EEB15188.1| Flap endonuclease 1-B, putative [Pediculus humanus corporis]
Length = 380
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 77/130 (59%), Gaps = 3/130 (2%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E K R V+ + AEC+ELL++ G+PYI AP EAEAQCA + A V T+D
Sbjct: 121 EEVDKFSRRLVKVTKDHVAECKELLKLMGIPYIEAPCEAEAQCAALVKAGKVYATATEDM 180
Query: 935 DVFLFGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D FG+ + +++ F + RK V+ ++ + +L +T+ + I + +LLG DY + I G
Sbjct: 181 DALTFGSNIILRHLTFSEARKMPVQEIYLDKVLAELEMTQNEFIDLCILLGCDYCDSIKG 240
Query: 992 IGIVNAIEVV 1001
IG AIE++
Sbjct: 241 IGPKRAIELI 250
>gi|189239788|ref|XP_969346.2| PREDICTED: similar to XPG-like endonuclease CG10670-PA [Tribolium
castaneum]
Length = 565
Score = 89.7 bits (221), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
Query: 895 CQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK- 953
C+E+L + GL + EAEA CA + LVDG+++ DSD F +GAR VY+N ++
Sbjct: 117 CEEMLSLLGLACVTGEGEAEALCAQLNETGLVDGIISQDSDCFAYGARVVYRNFSISQQG 176
Query: 954 -------YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPE 1006
V+ Y + + L R K+I +ALL GSDY++G+ GIG + ++ N +
Sbjct: 177 NQAAKGGSVDVYDISVANERLNFGRNKIIALALLCGSDYSDGVHGIGKDSVVKFFNLVKD 236
Query: 1007 EDGLSKFREW 1016
++ L + R W
Sbjct: 237 DEILQRLRSW 246
>gi|221113045|ref|XP_002168588.1| PREDICTED: flap endonuclease GEN homolog 1-like [Hydra
magnipapillata]
Length = 299
Score = 89.4 bits (220), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK--YVETYFM 960
G+PYI A EAE CA++ + DG +T+D D FL+G + +Y++ D K V TY
Sbjct: 121 GIPYIRATGEAEQMCAFLNSKKISDGCLTNDGDFFLYGGKCIYRDFSADPKNPCVSTYTQ 180
Query: 961 QDIEKDLGLTREKLIRMALLLGSDYTEGISGIG--IVNAIEVVNAFPEEDGLSKFREWIE 1018
+ I+ +G+TR +I +ALL G DY +G+SGIG +V+ +F +E+ L +F W E
Sbjct: 181 EKIKDKIGITRHDMIGIALLCGCDYIKGVSGIGKSLVSKFISEKSF-KENLLVRFHRWFE 239
>gi|350416440|ref|XP_003490949.1| PREDICTED: flap endonuclease 1-like [Bombus impatiens]
Length = 381
Score = 89.4 bits (220), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E E ++LLQ+ G+PYI AP EAEAQCA + A V T+D D
Sbjct: 125 KFNRRLVKVTKEHAKEAKQLLQLMGIPYIDAPCEAEAQCAALVKAGKVFATATEDMDALT 184
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + + + F + RK V+ + + KDLGL ++ I + ++LG DYT I G+G
Sbjct: 185 FGCNVLLRRLTFSEARKMPVQEFHFDKVLKDLGLNHDEFIDLCIMLGCDYTSSIKGVGPK 244
Query: 996 NAIEVV 1001
AIE++
Sbjct: 245 RAIELI 250
>gi|332157650|ref|YP_004422929.1| flap endonuclease-1 [Pyrococcus sp. NA2]
gi|331033113|gb|AEC50925.1| flap endonuclease-1 [Pyrococcus sp. NA2]
Length = 342
Score = 89.0 bits (219), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 17/170 (10%)
Query: 861 EEMQILDHEYMYLGD--EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
EE ++ E + GD E +K + A V+ + + ++LLQ+ G+P + AP E EAQ A
Sbjct: 99 EEAEVKWREALARGDIEEARKYAQRATKVNEMLIEDAKQLLQLMGIPIVQAPSEGEAQAA 158
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKD 966
YM + V + D D LFGA + +N I RK YVE ++D+
Sbjct: 159 YMAMKGDVYASASQDYDSLLFGAPRLVRNLTITGKRKMPGKDVYVEVKPELIILEDVLNQ 218
Query: 967 LGLTREKLIRMALLLGSDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
L +TREKLI +A+L+G+DY GI GIG A+E+V +D L+KF++
Sbjct: 219 LKITREKLIELAILVGTDYNPGGIKGIGPKKALEIVKY--SKDPLAKFQK 266
>gi|302772224|ref|XP_002969530.1| hypothetical protein SELMODRAFT_410274 [Selaginella moellendorffii]
gi|300163006|gb|EFJ29618.1| hypothetical protein SELMODRAFT_410274 [Selaginella moellendorffii]
Length = 454
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L+RN S M + L FG+P +++ EAEAQCA + D T DSD LF
Sbjct: 10 LKRNKGSQFGRMVEDATALATAFGIPCLVSLEEAEAQCAALNAMGFADACFTADSDALLF 69
Query: 940 GARSVYKNIF--DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNA 997
GA+ VYK+I +V Y M I G R LI + +LLG DY G+ G+G A
Sbjct: 70 GAKVVYKDISLKPGESHVVAYDMTKIRNAFGYGRNSLIALGILLGCDYFPGVHGLGPEKA 129
Query: 998 IEVVNAFPEEDGL 1010
++V F E+ L
Sbjct: 130 QQIVKKFGEDKIL 142
>gi|406865692|gb|EKD18733.1| DNA-repair protein rad2 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 460
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 22/238 (9%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
++ +K R V+ E AECQ LL+ G+PYIIAP EAEAQCA + A+ V ++D
Sbjct: 186 AEDVEKFSRRTVRVTREHNAECQRLLKCMGIPYIIAPTEAEAQCAVLARADKVYAAASED 245
Query: 934 SDVFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGIS 990
D F A + +++ F +++ ++ F+ + + LG+ R + + + +LLG DY + I
Sbjct: 246 MDTLCFDAPVLLRHLTFSEQRKEPIQEIFLPKVLEGLGMDRAQFVDLCILLGCDYLDPIP 305
Query: 991 GIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRR---------- 1040
+G A++++ E + KF +E+ K+ + + R
Sbjct: 306 KVGPNAALKIIR---EYGTIEKFVAAVEAGK----AKYSIPEDWPYKDARDLFFNPDVTP 358
Query: 1041 SSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ D D + V G+ +F F ED+ + ++ K + Q RLE F+
Sbjct: 359 ADHADCDFKWEAPDVDGLIKFLVEEKGFSEDRVRSGATRLQKN--LKSSQQARLEGFF 414
>gi|390332710|ref|XP_001197560.2| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like
[Strongylocentrotus purpuratus]
Length = 384
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 92/180 (51%), Gaps = 22/180 (12%)
Query: 874 GDEQK--KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
GD++ K E+ V+ + ECQ LL++ G+PY+ AP EAEAQC + + GV T
Sbjct: 118 GDQENMNKFEKRLVKVTKQHNEECQHLLKLMGVPYVKAPGEAEAQCCELVKKGKLYGVGT 177
Query: 932 DDSDVFLFGARSVYKN--IFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEG 988
+D D FG + ++ + + RK ++ + Q + + LGL R++ I + +L+G DY
Sbjct: 178 EDMDALTFGGNVLLRHLTVSEARKMPIQEFNYQRVLEGLGLNRQQFIDLCILMGCDYCGT 237
Query: 989 ISGIGIVNAIEVVNAF----------------PEEDGLSK-FREWIESPDPTILGKFDVQ 1031
I GIG+ A E++ P ED L K RE SPD T +FDV+
Sbjct: 238 IKGIGMKRAFELMKTHGSIETILEKIDQNKYPPPEDWLYKEARELFLSPDVTPGEEFDVR 297
>gi|312375261|gb|EFR22667.1| hypothetical protein AND_14372 [Anopheles darlingi]
Length = 738
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 10/134 (7%)
Query: 890 EMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF 949
+ +C+ELL GL + AP EAEA CAY+ L+DGV++ DSD F +GA V++N
Sbjct: 122 HVLKQCEELLSAMGLVCVQAPGEAEALCAYLNRDALIDGVISQDSDCFAYGAVRVFRNFC 181
Query: 950 DDRK--YVETYFMQDIEK----DLGLTREKLIRMALLLGSDYTE-GISGIGIVNAIEVVN 1002
+ V+ Y D+E+ L L +EK++ MALL G DY G++G+G ++N
Sbjct: 182 ASQNGGSVDVY---DLERANSAGLRLGQEKIVAMALLSGCDYCPAGVAGVGREMVTRLLN 238
Query: 1003 AFPEEDGLSKFREW 1016
+ E L + R W
Sbjct: 239 CYDNETILQRIRSW 252
>gi|302810129|ref|XP_002986756.1| hypothetical protein SELMODRAFT_425660 [Selaginella moellendorffii]
gi|300145410|gb|EFJ12086.1| hypothetical protein SELMODRAFT_425660 [Selaginella moellendorffii]
Length = 336
Score = 88.6 bits (218), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 880 LERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLF 939
L+RN S M + L FG+P +++ EAEAQCA + D T DSD LF
Sbjct: 10 LKRNKGSEFGRMVEDATALATAFGIPCLVSLEEAEAQCAALNAMGFADACFTADSDALLF 69
Query: 940 GARSVYKNIF--DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNA 997
GA+ VYK+I +V Y M I G R LI + +LLG DY G+ G+G A
Sbjct: 70 GAKVVYKDISLKPGESHVVAYDMTKIRNAFGYGRNSLIALGILLGCDYFPGVHGLGPEKA 129
Query: 998 IEVVNAFPEEDGL 1010
++V F E+ L
Sbjct: 130 QQIVKKFGEDKIL 142
>gi|18977786|ref|NP_579143.1| flap endonuclease-1 [Pyrococcus furiosus DSM 3638]
gi|397651906|ref|YP_006492487.1| flap endonuclease-1 [Pyrococcus furiosus COM1]
gi|28380014|sp|O93634.1|FEN_PYRFU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|6980604|pdb|1B43|A Chain A, Fen-1 From P. Furiosus
gi|6980605|pdb|1B43|B Chain B, Fen-1 From P. Furiosus
gi|4102602|gb|AAD01514.1| endo/exonuclease [Pyrococcus furiosus DSM 3638]
gi|18893531|gb|AAL81538.1| flap structure-specific endonuclease [Pyrococcus furiosus DSM 3638]
gi|393189497|gb|AFN04195.1| flap endonuclease-1 [Pyrococcus furiosus COM1]
Length = 340
Score = 88.6 bits (218), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 88/154 (57%), Gaps = 15/154 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + A V+ + + ++LL++ G+P + AP E EAQ AYM V + D
Sbjct: 115 EEARKYAQRATRVNEMLIEDAKKLLELMGIPIVQAPSEGEAQAAYMAAKGSVYASASQDY 174
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA + +N I RK YVE ++++ K+L LTREKLI +A+L+G
Sbjct: 175 DSLLFGAPRLVRNLTITGKRKLPGKNVYVEIKPELIILEEVLKELKLTREKLIELAILVG 234
Query: 983 SDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
+DY GI GIG+ A+E+V +D L+KF++
Sbjct: 235 TDYNPGGIKGIGLKKALEIVRH--SKDPLAKFQK 266
>gi|346467817|gb|AEO33753.1| hypothetical protein [Amblyomma maculatum]
Length = 266
Score = 88.2 bits (217), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 80/131 (61%), Gaps = 5/131 (3%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK--NIFDD 951
E + L+ + GLP +AE+ CA++ VDG +T+ SD FL+GA++VY+ NI ++
Sbjct: 68 ERKTLVDILGLPCCQIDRKAESVCAFLNEKGTVDGCITEGSDAFLYGAQTVYRKFNIEEE 127
Query: 952 RKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLS 1011
++ Y + DIEK L R+KLI + +L+GSD GI G+G+V A +++ F ++D +
Sbjct: 128 DPEIDEYNISDIEKKADLNRKKLIALNMLVGSD---GIPGVGMVTAGQLLKEFGDDDPIK 184
Query: 1012 KFREWIESPDP 1022
+ R W + P
Sbjct: 185 RLRRWTPNEVP 195
>gi|429854713|gb|ELA29705.1| DNA-repair protein rad2 [Colletotrichum gloeosporioides Nara gc5]
Length = 394
Score = 88.2 bits (217), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 113/236 (47%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+P+I+AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQRLLKLMGIPFIVAPTEAEAQCAVLARAGKVYAAASEDMDTLT 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ F +++ ++ + + + LG+ RE+ + + +LLG DY + I +G
Sbjct: 185 FDTPILLRHLTFSEQRKEPIQEVHIDKVLEGLGMEREQFVDLCILLGCDYLDPIPKVGPS 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRR----------SSDGD 1045
A++++ E L K E I+ DP GK+ + + R + D
Sbjct: 245 TALKLIR---EHGTLDKLVEAIKE-DPK--GKYQIPEDWPYQDARELFFKPDVRPADDPL 298
Query: 1046 KDVNYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEAFY 1098
D + K + G+ +F + F ED+ A +N+K Q+RL+ F+
Sbjct: 299 CDFKWEKPDMDGLVQFLVTEKGFSEDRVRSAGARLEKNLK-----SSQQVRLDGFF 349
>gi|269859663|ref|XP_002649556.1| FLAP endonuclease-1 [Enterocytozoon bieneusi H348]
gi|317374899|sp|B7XHS8.1|FEN1_ENTBH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|220067107|gb|EED44575.1| FLAP endonuclease-1 [Enterocytozoon bieneusi H348]
Length = 358
Score = 87.8 bits (216), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI---FD 950
ECQ+ L++ +PY+IAP EAEA CA++ + VD V T+D D FG+ + +N
Sbjct: 139 ECQKTLRLLNIPYVIAPSEAEAYCAWLCKSKFVDAVATEDMDSLCFGSPLLLRNFNTALS 198
Query: 951 DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL 1010
+ VE Y + I + L T E+ + + +LLG DY+ I G+G+ A E + + D L
Sbjct: 199 QKLPVEEYNLHKILEGLQFTMEQFVDLCILLGCDYSATIRGVGMKRAFEYIKKYKSIDNL 258
>gi|443691424|gb|ELT93282.1| hypothetical protein CAPTEDRAFT_209048 [Capitella teleta]
Length = 270
Score = 87.8 bits (216), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/129 (36%), Positives = 75/129 (58%), Gaps = 4/129 (3%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
S E Q LL + G+P + + EAEA C + +V+GV+T+DSD FLFGA VYKN
Sbjct: 104 SSKVREMQHLLDLLGIPSVQSSGEAEALCGVLNERGVVEGVITNDSDAFLFGATKVYKNF 163
Query: 949 FDDR---KYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF- 1004
++ E Y M+ ++ LG R+ L+ +ALL G D+T G G+G A++++ +
Sbjct: 164 TANKAKESEQEVYRMKRLQGLLGADRKGLVALALLAGCDFTSGSQGVGSTGALKLLKHWG 223
Query: 1005 PEEDGLSKF 1013
P+ D + ++
Sbjct: 224 PQVDPIERY 232
>gi|260798636|ref|XP_002594306.1| hypothetical protein BRAFLDRAFT_275596 [Branchiostoma floridae]
gi|317374877|sp|C3ZBT0.1|FEN1_BRAFL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|229279539|gb|EEN50317.1| hypothetical protein BRAFLDRAFT_275596 [Branchiostoma floridae]
Length = 380
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 76/129 (58%), Gaps = 3/129 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K ++ V+ E AEC++LL + G+PY+ AP EAEAQCA + V T+D DV
Sbjct: 125 KFQKRLVKVTKEHNAECKKLLTLMGIPYVDAPCEAEAQCAELAKKGKVYAAGTEDMDVLT 184
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ F + RK ++ Y+ + +L LT+++ I + +LLG DY + I GIG
Sbjct: 185 FGTNIMLRHLTFSEARKMPIKEYYYDRLLAELDLTQDQFIDLCILLGCDYCDSIRGIGPK 244
Query: 996 NAIEVVNAF 1004
AIE++ +
Sbjct: 245 RAIELIRQY 253
>gi|195025439|ref|XP_001986060.1| GH21157 [Drosophila grimshawi]
gi|317374890|sp|B4J6M4.1|FEN1_DROGR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|193902060|gb|EDW00927.1| GH21157 [Drosophila grimshawi]
Length = 388
Score = 87.4 bits (215), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 46/249 (18%)
Query: 874 GDEQK--KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
GDE + K R V+ E E +ELL++ G+PY+ AP EAEAQCA + A V T
Sbjct: 118 GDEAQIEKFNRRLVRVTKEHSREAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 932 DDSDVFLFGARSV--YKNIFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEG 988
+D D FG+ + Y + RK V+ + + + L LT ++ I + +L+G DY E
Sbjct: 178 EDMDALTFGSCKLLRYLTYSEARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCES 237
Query: 989 ISGIGIVNAIEVVNAF-----------------PEEDGLSKFREWIESPDPTILGKFDVQ 1031
I G+G AIE++ ++ PE + RE PD
Sbjct: 238 IRGVGPKRAIELIKSYRDIETILENIDTNKYAVPENWNYKRARELFIEPD---------V 288
Query: 1032 TGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDK--H 1089
T AS+ + +D D+D G+ +F QF+E++ KK+ K
Sbjct: 289 TDASTIDLKWTDPDED---------GLVQFLCGDRQFNEER----VRNGAKKLLKSKQAQ 335
Query: 1090 TQLRLEAFY 1098
TQ+RL++F+
Sbjct: 336 TQVRLDSFF 344
>gi|367031946|ref|XP_003665256.1| hypothetical protein MYCTH_2308790 [Myceliophthora thermophila ATCC
42464]
gi|347012527|gb|AEO60011.1| hypothetical protein MYCTH_2308790 [Myceliophthora thermophila ATCC
42464]
Length = 395
Score = 87.4 bits (215), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 115/236 (48%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYI+AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTKEHNAECQRLLKLMGVPYIVAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ ++ + + + L + R++ + + +LLG DY + I +G
Sbjct: 185 FDAPILLRHLTFSEQRKEPIQEIHVSKVLEGLNMDRKQFVDLCILLGCDYLDPIPKVGPS 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDV----------QTGASSRKRRSSDGD 1045
A++++ E L K E++++ DP G++ V + S R++ D
Sbjct: 245 TALKLIR---EHGSLEKVVEFMKN-DPK--GRYTVPDDWPFEDARELFFSPDVRQADDPL 298
Query: 1046 KDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
D + K + G+ +F F ED+ A +N+K Q R+E F+
Sbjct: 299 CDFKWEKPDIEGLVQFLVHEKGFSEDRVRAGGARLEKNLK-----SSQQSRIEGFF 349
>gi|242398519|ref|YP_002993943.1| Flap structure-specific endonuclease [Thermococcus sibiricus MM 739]
gi|259645975|sp|C6A1U9.1|FEN_THESM RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|242264912|gb|ACS89594.1| Flap structure-specific endonuclease [Thermococcus sibiricus MM 739]
Length = 340
Score = 87.4 bits (215), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 87/154 (56%), Gaps = 15/154 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E KK + A ++ + + ++LL++ G+P++ AP E EAQ AYM V + D
Sbjct: 115 EEAKKYAQRASKINEILIEDAKKLLELMGIPWVQAPSEGEAQAAYMASKGDVWASASQDY 174
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFG + +N I RK Y+E ++D+ K+L LTREKLI +A+L+G
Sbjct: 175 DSLLFGTPKLVRNLTITGKRKLPGKDVYIEVKPELILLEDVLKELKLTREKLIELAILVG 234
Query: 983 SDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
+DY GI G+G A+E+V +D LSK+++
Sbjct: 235 TDYNPGGIKGLGPKKALEIVKY--SKDPLSKYQK 266
>gi|340518918|gb|EGR49158.1| Rad27p/FEN-1 endonuclease-like protein [Trichoderma reesei QM6a]
Length = 395
Score = 87.4 bits (215), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 110/236 (46%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYIIAP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ F +++ ++ + + + L + RE+ + + +LLG DY + I +G
Sbjct: 185 FNTPILLRHLTFSEQRKEPIQEIRLDKVLEGLNMEREQFVDLCILLGCDYLDPIPKVGPT 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRR----------SSDGD 1045
A++++ E L K E IE DP K+ + + R + D
Sbjct: 245 TALKLIR---EHGTLEKVVEAIEK-DPK--KKYTLPEDWPYKDARELFFHPDVRPADDPL 298
Query: 1046 KDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
D + K + G+ +F + F ED+ A +N+K Q RLE F+
Sbjct: 299 CDFKWDKPDIDGLVQFLVTEKGFSEDRVRSGGARLEKNLK-----NSQQARLEGFF 349
>gi|317376211|sp|B8MNF2.2|FEN1_TALSN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 116/243 (47%), Gaps = 31/243 (12%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
++ +K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D
Sbjct: 120 AEDMEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 179
Query: 934 SDVFLFGARSVYKNIFDDRKYVETYFMQDIEKD-----LGLTREKLIRMALLLGSDYTEG 988
D F A + +++ + E +Q+I D LG+ R++ I + +LLG DY E
Sbjct: 180 MDTLCFEAPILLRHLTFSEQRKEP--IQEIHLDKALEGLGMDRKQFIDLCILLGCDYLEP 237
Query: 989 ISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK---------- 1038
I +G A++++ E L K E IES DP K+ + ++
Sbjct: 238 IPKVGPNTALKLIR---EHGSLEKVVEAIES-DPK--KKYVIPDDWPYKEARELFFNPDV 291
Query: 1039 RRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLE 1095
R++ D D + V G+ +F + F ED+ +A ++N+K Q RLE
Sbjct: 292 RKADDPQCDFKWESPDVEGLIQFLVTEKGFSEDRVRNGAARLAKNLKSA-----QQSRLE 346
Query: 1096 AFY 1098
F+
Sbjct: 347 GFF 349
>gi|440633913|gb|ELR03832.1| flap endonuclease-1 [Geomyces destructans 20631-21]
Length = 395
Score = 87.0 bits (214), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 6/142 (4%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R VS + AECQ+LL++ G+PYIIAP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVSRQHNAECQQLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDD--RKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + + +++ F + ++ ++ + + + LG+ R++ + + +LLG DY + I IG
Sbjct: 185 FDSPILIRHLTFSEARKEPIQEIHVDKVLEGLGMDRKQFVDLCILLGCDYLDPIPKIGPN 244
Query: 996 NAIEVVNAFPEEDGLSKFREWI 1017
A++++ E L K EWI
Sbjct: 245 TALKMIR---EHGSLEKVVEWI 263
>gi|148709395|gb|EDL41341.1| flap structure specific endonuclease 1, isoform CRA_b [Mus musculus]
Length = 432
Score = 87.0 bits (214), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + +E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 150 AKRSERRAEAEKQLQQAQEAGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 209
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + + ++LG
Sbjct: 210 EAEASCAALAKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELG 269
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 270 LNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 303
>gi|429962438|gb|ELA41982.1| hypothetical protein VICG_00999 [Vittaforma corneae ATCC 50505]
Length = 613
Score = 87.0 bits (214), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 897 ELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVE 956
ELL + LP+I E +AQC Y+ L+DGVV++D+D+ L G +VYKN F K +
Sbjct: 442 ELLDILELPHIECIGETDAQCGYLFRKRLIDGVVSEDNDMVLHGV-TVYKNFFRKDKDIL 500
Query: 957 TYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
++ QD+ + LGL ++ LI+M+ LLGSDY G+ +GI
Sbjct: 501 SFSYQDVIEQLGLDQDSLIKMSYLLGSDYCIGVKRVGI 538
>gi|15679628|ref|NP_276745.1| flap endonuclease-1 [Methanothermobacter thermautotrophicus str.
Delta H]
gi|28380011|sp|O27670.1|FEN_METTH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|2622760|gb|AAB86106.1| DNA repair protein Rad2 [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 328
Score = 87.0 bits (214), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 114/232 (49%), Gaps = 26/232 (11%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
D KK + +SSE+ + LL++ G+PY+ AP E EAQ +YM V + D
Sbjct: 115 DRAKKYAVRSSRMSSEILESSKRLLELLGIPYVQAPGEGEAQASYMVKMGDAWAVASQDY 174
Query: 935 DVFLFGARSVYKNI-----FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGI 989
D LFGA V +N+ +D + +E ++ ++L ++ +L+ MALL+G+D+ EG+
Sbjct: 175 DCLLFGAPRVVRNLTLSGKLEDPEIIE---LESTLRELSISHTQLVDMALLVGTDFNEGV 231
Query: 990 SGIGIVNAIEVVNAFPEEDGLSKFREWIES---PDPTILGKFDVQTGASSRKRRSSDGDK 1046
GIG ++++ E+ + K +E+ DP +L + ++ S D
Sbjct: 232 KGIGARRGLKLIR---EKGDIFKVIRDLEADIGGDPQVLRRIFLEPEVSE--------DY 280
Query: 1047 DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAFY 1098
++ + K V GV EF + F ED+ A +KK TQ LE ++
Sbjct: 281 EIRWRKPDVEGVIEFLCTEHGFSEDRVRA----ALKKFEGASSTQKSLEDWF 328
>gi|330914981|ref|XP_003296859.1| hypothetical protein PTT_07066 [Pyrenophora teres f. teres 0-1]
gi|311330789|gb|EFQ95031.1| hypothetical protein PTT_07066 [Pyrenophora teres f. teres 0-1]
Length = 342
Score = 87.0 bits (214), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E ECQ LL++ G+PYI+AP EAEAQCA + V ++D D
Sbjct: 72 KFSRRTVRVTREHNEECQRLLKLMGIPYIVAPTEAEAQCAALARGGKVYAAASEDMDTLT 131
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F + +++ F +++ +E + + +E L + R++ I + +LLG DY + I GIG
Sbjct: 132 FDTPILLRHLTFSEQRKEPILEIHLDKVLE-GLQMERKQFIDLCILLGCDYLDPIKGIGP 190
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSR-------KRRSSDGDKD 1047
A++++ E + L E I+S L D A +R R + D + D
Sbjct: 191 STALKLIR---EHNDLEGIVEHIKSQTSKKLTIPDDWPFADARLLFLEPDVRPADDPECD 247
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ V G+ +F F+ED+ +A+ +NMK Q RLE F+
Sbjct: 248 FKWEAPDVEGLVKFLVEEKHFNEDRVRNGAAKLQKNMKTA-----QQSRLEGFF 296
>gi|327278874|ref|XP_003224185.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Anolis
carolinensis]
Length = 515
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 74/126 (58%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PY+ AP EAEA CA + AN V T+D D
Sbjct: 258 KFSKRLVKVTKQHNEECKKLLTLMGIPYVDAPGEAEASCAALVKANKVYAAATEDMDCLT 317
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ + +K ++ + + I +DL LT+E+ + + +LLG DY E I GIG
Sbjct: 318 FGSPVLMRHLTASEAKKLPIQEFHLSRILQDLSLTQEEFVDLCILLGCDYCESIRGIGPK 377
Query: 996 NAIEVV 1001
A+E++
Sbjct: 378 RAVELI 383
>gi|340966641|gb|EGS22148.1| hypothetical protein CTHT_0016650 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 395
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 112/236 (47%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYIIAP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKD-----LGLTREKLIRMALLLGSDYTEGISGIG 993
F + +++ + E +Q+I D L + R++ + + +LLG DY + I IG
Sbjct: 185 FNTPILLRHLTFAEQRKEP--IQEIHTDKVLEGLNMDRKQFVDLCILLGCDYLDPIPKIG 242
Query: 994 IVNAIEVVNAFPEEDGLSKFREWIESPDP----TILGKFDVQTG----ASSRKRRSSDGD 1045
A++++ E L K E+I++ DP TI + Q + R++ D +
Sbjct: 243 PSTALKLIR---EHGSLEKVVEFIQN-DPKKRYTIPEDWPYQDARELFFNPDVRQADDPE 298
Query: 1046 KDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
D + K V G+ +F F ED+ + +N+K Q R+E F+
Sbjct: 299 CDFKWEKPDVEGLVQFLVKEKGFSEDRVRNGAQRLEKNLK-----GAQQARIEGFF 349
>gi|242813984|ref|XP_002486279.1| Flap endonuclease Rad27, putative [Talaromyces stipitatus ATCC 10500]
gi|218714618|gb|EED14041.1| Flap endonuclease Rad27, putative [Talaromyces stipitatus ATCC 10500]
Length = 399
Score = 86.7 bits (213), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 116/243 (47%), Gaps = 31/243 (12%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
++ +K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D
Sbjct: 124 AEDMEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 183
Query: 934 SDVFLFGARSVYKNIFDDRKYVETYFMQDIEKD-----LGLTREKLIRMALLLGSDYTEG 988
D F A + +++ + E +Q+I D LG+ R++ I + +LLG DY E
Sbjct: 184 MDTLCFEAPILLRHLTFSEQRKEP--IQEIHLDKALEGLGMDRKQFIDLCILLGCDYLEP 241
Query: 989 ISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK---------- 1038
I +G A++++ E L K E IES DP K+ + ++
Sbjct: 242 IPKVGPNTALKLIR---EHGSLEKVVEAIES-DPK--KKYVIPDDWPYKEARELFFNPDV 295
Query: 1039 RRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLE 1095
R++ D D + V G+ +F + F ED+ +A ++N+K Q RLE
Sbjct: 296 RKADDPQCDFKWESPDVEGLIQFLVTEKGFSEDRVRNGAARLAKNLKSA-----QQSRLE 350
Query: 1096 AFY 1098
F+
Sbjct: 351 GFF 353
>gi|195382111|ref|XP_002049775.1| GJ21778 [Drosophila virilis]
gi|317374896|sp|B4LM90.1|FEN1_DROVI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194144572|gb|EDW60968.1| GJ21778 [Drosophila virilis]
Length = 386
Score = 86.7 bits (213), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 46/250 (18%)
Query: 874 GDEQK--KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
GDE + K R V+ E E +ELL++ G+PY+ AP EAEAQCA + A V T
Sbjct: 118 GDEAEIDKFNRRLVRVTKEHSREAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 932 DDSDVFLFGARSV--YKNIFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEG 988
+D D FG+ + Y + RK V+ + + + L LT ++ I + +L+G DY E
Sbjct: 178 EDMDALTFGSCKLLRYLTYSEARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCES 237
Query: 989 ISGIGIVNAIEVVNAF-----------------PEEDGLSKFREWIESPDPTILGKFDVQ 1031
I G+G AIE++ ++ PE + RE PD
Sbjct: 238 IKGVGPKRAIELIKSYRDIETILENIDTSKYPVPENWNYKRARELFIEPD---------V 288
Query: 1032 TGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDK--H 1089
AS+ + ++ D+D G+ +F QF+E++ KK+ K
Sbjct: 289 ADASAIDLKWTEPDED---------GLVQFLCGDRQFNEER----VRNGAKKLLKSKQAQ 335
Query: 1090 TQLRLEAFYT 1099
TQ+RL++F+T
Sbjct: 336 TQVRLDSFFT 345
>gi|326919868|ref|XP_003206199.1| PREDICTED: flap endonuclease 1-like [Meleagris gallopavo]
Length = 381
Score = 86.7 bits (213), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFSKRLVKVTQQHTDECKKLLMLMGIPYVEAPGEAEASCATLVKAGKVYAAATEDMDCLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ + +K ++ + + I +DLGLT E+ + + +LLG DY E I GIG
Sbjct: 185 FGSPVLMRHLTASETKKLPIQEFHLNRILQDLGLTWEQFVDLCILLGCDYCESIRGIGPK 244
Query: 996 NAIEVV 1001
A+E++
Sbjct: 245 RAVELI 250
>gi|126344550|ref|XP_001362314.1| PREDICTED: flap endonuclease 1-like [Monodelphis domestica]
Length = 380
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E K + V+ E EC++LL++ G+PY+ AP EAEA CA + A V T+D
Sbjct: 121 EEADKFSKRLVKVTKEHNDECKQLLRLMGIPYLEAPGEAEASCAALAKAGKVYAAATEDM 180
Query: 935 DVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D FG+ + +++ + +K ++ + + + + LGLT+E+ + + +LLGSDY E I G
Sbjct: 181 DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQGLGLTQEQFVDLCILLGSDYCESIRG 240
Query: 992 IGIVNAIEVVN 1002
IG AI+++
Sbjct: 241 IGPKRAIDLIQ 251
>gi|340717150|ref|XP_003397050.1| PREDICTED: LOW QUALITY PROTEIN: flap endonuclease 1-like [Bombus
terrestris]
Length = 381
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E E ++LLQ+ G+PYI AP EAEAQCA + A V T+D D
Sbjct: 125 KFNRRLVKVTKEHALETKQLLQLMGIPYIDAPCEAEAQCAALVKAGKVFATATEDMDALT 184
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + + + F + RK V+ + + +DLGL + I + ++LG DYT I G+G
Sbjct: 185 FGCNILLRRLTFSEARKMPVQEFHFDKVLEDLGLNHNEFIDLCIMLGCDYTSSIKGVGPK 244
Query: 996 NAIEVV 1001
AIE++
Sbjct: 245 RAIELI 250
>gi|123335114|ref|XP_001294157.1| XPG I-region family protein [Trichomonas vaginalis G3]
gi|121871805|gb|EAX81227.1| XPG I-region family protein [Trichomonas vaginalis G3]
Length = 335
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 18/233 (7%)
Query: 874 GDEQK--KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
GD++ K R + EC++LL+ G+PY+ AP EAEA+CA + A LVD + T
Sbjct: 87 GDQEAIDKFSRRTVHLDKTQVEECKQLLECLGVPYVDAPCEAEAECAALNKAGLVDAMAT 146
Query: 932 DDSDVFLFGARSVYKNIF-----DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
+D D F + +++ DD ++ M +EK GLTRE+ + +L+G DY
Sbjct: 147 EDMDSLAFATPQLIRHLSYGAKGDDLLQIDYKIM--MEKS-GLTREEFVDFCILMGCDYC 203
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSK-FREWIESPDPTILGKFDVQTGASSRKRRSSDGD 1045
+ I GIG +A E++ + + + K + E P+ FD D
Sbjct: 204 DTIKGIGKKHAYELIKKYHNIETIIKNLDKKYELPE-----DFDYVRARELFFNHEVTTD 258
Query: 1046 KDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAFY 1098
++ + K V V EF F E + A ++ +K K TQ+R++ F+
Sbjct: 259 VNLTWKKPDVEKVKEFLCGSRMFAESRVEAACAKIVKA--RGKGTQMRMDNFF 309
>gi|317374903|sp|D3TQJ5.1|FEN1_GLOMM RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|289742451|gb|ADD19973.1| 5'-3' exonuclease [Glossina morsitans morsitans]
Length = 382
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 114/236 (48%), Gaps = 32/236 (13%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E E +ELL++ G+PY+ AP EAEAQCA + A V T+D D
Sbjct: 125 KFNRRLVKVTKEHANEAKELLKLMGVPYVEAPCEAEAQCAALVKAGKVYATATEDMDALT 184
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ F + RK V+ + + GLT ++ I + +LLG DY +GI GIG
Sbjct: 185 FGSGILLRHLTFSEARKMPVKEFSYAKVLDGFGLTSQEFIDLCILLGCDYCDGIRGIGPK 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTG-----------ASSRKRRSSDG 1044
A E++N++ + + E I+ T+ ++ Q SS + + D
Sbjct: 245 RATELMNSYKD---IETILEKIDRKKYTVPEDWNYQIARELFVNPEVADPSSLELKWFDP 301
Query: 1045 DKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDK--HTQLRLEAFY 1098
D+D G+ F QF+ED+ + KKI K TQ RL++F+
Sbjct: 302 DED---------GLVRFFCGDRQFNEDRVRS----GAKKILKCKSSQTQGRLDSFF 344
>gi|15778123|dbj|BAB68507.1| FEN-1 nuclease [Gallus gallus]
Length = 381
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFSKRLVKVTQQHTDECKKLLMLMGIPYVEAPGEAEASCATLVKAGKVYAAATEDMDCLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ + +K ++ + + + +DLGLT E+ + + +LLG DY E I GIG
Sbjct: 185 FGSPVLMRHLTASEAKKLPIQEFHLNRVLQDLGLTWEQFVDLCILLGCDYCESIRGIGPK 244
Query: 996 NAIEVVN 1002
A+E++
Sbjct: 245 RAVELIK 251
>gi|358369087|dbj|GAA85702.1| DNA-repair protein Rad2 [Aspergillus kawachii IFO 4308]
Length = 395
Score = 86.3 bits (212), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 115/236 (48%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ F +++ ++ + + LG+ R++ I + +LLG DY E I +G
Sbjct: 185 FETPILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPIPKVGPN 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDV----------QTGASSRKRRSSDGD 1045
A++++ + L K E++E+ DP KF V + + R ++D +
Sbjct: 245 TALKLIR---DHGSLEKVLEFMEN-DPK--KKFVVPEDWPYEDARELFLNPDVRDANDPE 298
Query: 1046 KDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
D + V G+ EF F+ED+ +A +N+K Q RLE F+
Sbjct: 299 CDFKWEAPDVPGLVEFLVKDKGFNEDRVKNGAARLQKNLKSA-----QQSRLEGFF 349
>gi|118405170|ref|NP_001072959.1| flap endonuclease 1 [Gallus gallus]
gi|82082625|sp|Q5ZLN4.1|FEN1_CHICK RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|53129083|emb|CAG31359.1| hypothetical protein RCJMB04_5g12 [Gallus gallus]
Length = 381
Score = 85.9 bits (211), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFSKRLVKVTQQHTDECKKLLMLMGIPYVEAPGEAEASCATLVKAGKVYAAATEDMDCLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ + +K ++ + + + +DLGLT E+ + + +LLG DY E I GIG
Sbjct: 185 FGSPVLMRHLTASEAKKLPIQEFHLNRVLQDLGLTWEQFVDLCILLGCDYCESIRGIGPK 244
Query: 996 NAIEVVN 1002
A+E++
Sbjct: 245 RAVELIK 251
>gi|400598682|gb|EJP66391.1| DNA-repair protein rad2 [Beauveria bassiana ARSEF 2860]
Length = 394
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYIIAP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLAKAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + + +++ F +++ ++ + + + L + R++ + + +LLG DY + I +G
Sbjct: 185 FDSPILLRHLTFSEQRKEPIQEIHLDKVLEGLNMKRKQFVDLCILLGCDYLDPIPKVGPT 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRR----------SSDGD 1045
A++++ E L K E +ES K+ + + R + D
Sbjct: 245 TALKLIR---EHGSLEKVVEAMESDSKK---KYTIPEDWPYKDARDLFFEPDVRPADDPL 298
Query: 1046 KDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
DV + K + G+ +F + F ED+ A +N+K Q RLE F+
Sbjct: 299 CDVKWDKPDMDGLVQFLVAEKGFSEDRVRSGGARLEKNLK-----SSQQARLEGFF 349
>gi|167378108|ref|XP_001734673.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903695|gb|EDR29139.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 755
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 14/115 (12%)
Query: 896 QELLQMF---GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDR 952
Q+L++MF +PYIIAP EAEAQC +E L D + T+DSD+F++GA++V KN+F
Sbjct: 563 QKLIKMFKEINIPYIIAPGEAEAQCYQLEHDGLCDYIATNDSDIFVYGAKNVIKNLFTSS 622
Query: 953 K---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
Y + F D L + +L +LL+ SDY+ GI IG ++A +++N+F
Sbjct: 623 HPLLYSSSTF------DYSLDQIRL--YSLLVPSDYSNGIPNIGPISAKKIINSF 669
>gi|347968324|ref|XP_312255.5| AGAP002669-PA [Anopheles gambiae str. PEST]
gi|333468059|gb|EAA08023.5| AGAP002669-PA [Anopheles gambiae str. PEST]
Length = 733
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 74/136 (54%), Gaps = 4/136 (2%)
Query: 890 EMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF 949
+ +C+ELL GL + AP EAEA CAY+ NL+ GV++ DSD F +GA V++N
Sbjct: 118 HVLKQCEELLSAMGLVCVQAPGEAEALCAYLNRDNLIYGVISQDSDCFAYGAVRVFRNFC 177
Query: 950 DDRK--YVETYFMQDIEKD-LGLTREKLIRMALLLGSDYTE-GISGIGIVNAIEVVNAFP 1005
+ VE Y + + L L +EK++ MALL G DY G+ G+G ++ +
Sbjct: 178 ASQNGGSVEIYDLTRVNASVLQLGQEKIVAMALLSGCDYCPAGVMGVGRELVTRFISCYE 237
Query: 1006 EEDGLSKFREWIESPD 1021
+ L K R W ++ D
Sbjct: 238 NGEILPKIRSWRKTAD 253
>gi|189191944|ref|XP_001932311.1| DNA-repair protein rad2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187973917|gb|EDU41416.1| DNA-repair protein rad2 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 395
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E ECQ LL++ G+PYI+AP EAEAQCA + V ++D D
Sbjct: 125 KFSRRTVRVTREHNEECQRLLKLMGIPYIVAPTEAEAQCAALARGGKVYAAASEDMDTLT 184
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F + +++ F +++ +E + + +E L + R++ I + +LLG DY + I GIG
Sbjct: 185 FDTPILLRHLTFSEQRKEPILEIHLDKVLE-GLQMERKQFIDLCILLGCDYLDPIKGIGP 243
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSR-------KRRSSDGDKD 1047
A++++ E + L E I+S L D A +R R + D + D
Sbjct: 244 STALKLIR---EHNDLEGVVEHIKSQSSKKLTIPDDWPFADARLLFLEPDVRPADDPECD 300
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ V G+ +F F+ED+ +A+ +NMK Q RLE F+
Sbjct: 301 FKWEAPDVEGLVKFLVEEKHFNEDRVRNGAAKLQKNMKTA-----QQSRLEGFF 349
>gi|378733116|gb|EHY59575.1| flap endonuclease 1 [Exophiala dermatitidis NIH/UT8656]
Length = 395
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 31/243 (12%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R V+ E EC+ LL++ G+PYIIAP EAEAQCA + A V ++D
Sbjct: 120 AEEVEKFSRRTVRVTREHNEECRRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASED 179
Query: 934 SDVFLFGARSVYKNIFDDRKYVETYFMQDIEKD-----LGLTREKLIRMALLLGSDYTEG 988
D F A + +++ + E +Q+I D LG+ R + I + +LLG DY +
Sbjct: 180 MDTLCFNAPILLRHLTFSEQRKEP--IQEIHLDKTLEGLGMDRTQFIDLCILLGCDYVDP 237
Query: 989 ISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK---------- 1038
I +G A++++ E L K E+IE+ DP ++ + +
Sbjct: 238 IPKVGPNTALKLIR---EHGTLEKVVEFIEN-DPK--KRYSLPEDWPYKDARELFLHPDV 291
Query: 1039 RRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLE 1095
R + D + D + V G+ +F + F+ED+ + + +N+K Q RLE
Sbjct: 292 RSADDPECDFKWEAPDVEGLVQFLVNEKGFNEDRVRNAAQKLQKNVKTA-----QQSRLE 346
Query: 1096 AFY 1098
F+
Sbjct: 347 GFF 349
>gi|317376212|sp|B2VTT3.2|FEN1_PYRTR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E ECQ LL++ G+PYI+AP EAEAQCA + V ++D D
Sbjct: 125 KFSRRTVRVTREHNEECQRLLKLMGIPYIVAPTEAEAQCAALARGGKVYAAASEDMDTLT 184
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F + +++ F +++ +E + + +E L + R++ I + +LLG DY + I GIG
Sbjct: 185 FDTPILLRHLTFSEQRKEPILEIHLDKVLE-GLQMERKQFIDLCILLGCDYLDPIKGIGP 243
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSR-------KRRSSDGDKD 1047
A++++ E + L E I+S L D A +R R + D + D
Sbjct: 244 STALKLIR---EHNDLEGVVEHIKSQSSKKLTIPDDWPFADARLLFLEPDVRPADDPECD 300
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ V G+ +F F+ED+ +A+ +NMK Q RLE F+
Sbjct: 301 FKWEAPDVEGLVKFLVEEKHFNEDRVRNGAAKLQKNMKTA-----QQSRLEGFF 349
>gi|326429821|gb|EGD75391.1| flap endonuclease-1 [Salpingoeca sp. ATCC 50818]
Length = 380
Score = 85.9 bits (211), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 76/129 (58%), Gaps = 3/129 (2%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
+ +K R V+ E +CQELL + G+PYI+AP EAEAQCA + A V T+D D
Sbjct: 122 DMEKFTRRLVKVTPEHNRQCQELLDLMGIPYIVAPCEAEAQCAELVKAGKVFATATEDMD 181
Query: 936 VFLFGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
FG + +++ F + RK ++ + ++ + + L L++++ I + +LLG DY + I GI
Sbjct: 182 ALTFGTSVLLRHMTFSEARKMPIQQFELKKVLEGLDLSQDEFIDLCILLGCDYCDKIGGI 241
Query: 993 GIVNAIEVV 1001
G V A ++
Sbjct: 242 GRVRAYSLI 250
>gi|449283444|gb|EMC90086.1| Flap endonuclease 1 [Columba livia]
Length = 382
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC++LL + G+PY+ AP EAEA CA + A V T+D D FG+ + +++ +
Sbjct: 140 ECKKLLTLMGIPYLEAPGEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASET 199
Query: 952 RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+K ++ + + I +DLGLT E+ + + +LLG DY E I GIG A+E++
Sbjct: 200 KKLPIQEFHLNRILQDLGLTWEQFVDLCILLGCDYCESIRGIGPKRAVELI 250
>gi|367047833|ref|XP_003654296.1| hypothetical protein THITE_2117171 [Thielavia terrestris NRRL 8126]
gi|347001559|gb|AEO67960.1| hypothetical protein THITE_2117171 [Thielavia terrestris NRRL 8126]
Length = 359
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 23/234 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYI+AP EAEAQCA + A V ++D D
Sbjct: 89 KFSRRTVRVTKEHNAECQRLLRLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDMDTLC 148
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ F +++ ++ + + + L + R++ + + +LLG DY + I +G
Sbjct: 149 FDTPILLRHLTFSEQRKEPIQEIHLAKVLEGLNMDRKQFVDLCILLGCDYLDPIPKVGPS 208
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDP----TILGKFDVQTG----ASSRKRRSSDGDKD 1047
A++++ E L K E++ + DP TI + Q S R+ D D
Sbjct: 209 TALKLIR---EHGTLEKVVEFMRN-DPKGRYTIPDDWPFQDARELFFSPDVRQPDDPLCD 264
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ K + G+ +F F ED+ A +N+K Q R+E F+
Sbjct: 265 FKWDKPDIEGLVQFLVHEKGFSEDRVRAGGARLEKNLK-----SSQQARIEGFF 313
>gi|14520948|ref|NP_126423.1| flap endonuclease-1 [Pyrococcus abyssi GE5]
gi|28380024|sp|Q9V0P9.1|FEN_PYRAB RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|5458165|emb|CAB49654.1| fen1 FLAP endonuclease-1 [Pyrococcus abyssi GE5]
gi|380741502|tpe|CCE70136.1| TPA: flap endonuclease-1 [Pyrococcus abyssi GE5]
Length = 343
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 92/169 (54%), Gaps = 17/169 (10%)
Query: 861 EEMQILDHEYMYLGD--EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
EE +I E + GD E +K + A V+ + + ++LLQ+ G+P + AP E EAQ A
Sbjct: 99 EEAEIKWKEALAKGDIEEARKYAQRATKVNEMLIEDAKKLLQLMGIPIVQAPSEGEAQAA 158
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKD 966
YM V + D D LFG + +N I RK YVE ++++ K+
Sbjct: 159 YMAGKGDVYASASQDYDSLLFGTPRLVRNLTITGKRKMPGKDIYVEIKPELIVLEEVLKE 218
Query: 967 LGLTREKLIRMALLLGSDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFR 1014
L +TREKLI +A+L+G+DY GI GIG A+E+V +D L+KF+
Sbjct: 219 LKITREKLIELAILVGTDYNPGGIKGIGPKKALEIVKY--SKDPLAKFQ 265
>gi|393244253|gb|EJD51765.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 320
Score = 85.5 bits (210), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 854 ATEKILEEEMQILDHEYMYLGDEQKKLERNAESV--------SSEMFAECQELLQMFGLP 905
A + M + + + +KK ++ A +V +++M + ++L+ G+P
Sbjct: 84 AKANVTRRRMAVREEAILRAATLEKKGDKRASAVAYKASVVVTTQMVTQTIKILRAAGIP 143
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 965
Y++AP EA+AQ A+++ L+D V ++DSD+ +FG + + + DD
Sbjct: 144 YLVAPYEADAQLAFLDRVGLIDAVYSEDSDLVVFGVQKLVCKLQDDGACAIVR-----HA 198
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFP 1005
DL ++ L MALL G DYT G+ G+G+ A +V N FP
Sbjct: 199 DLSVSHSHLRLMALLAGCDYTRGLPGVGLATAHKVANQFP 238
>gi|14591211|ref|NP_143287.1| flap endonuclease-1 [Pyrococcus horikoshii OT3]
gi|28380013|sp|O50123.1|FEN_PYRHO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|3257838|dbj|BAA30521.1| 343aa long hypothetical 5' nuclease [Pyrococcus horikoshii OT3]
Length = 343
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 84/153 (54%), Gaps = 15/153 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + A V+ + + ++LLQ+ G+P I AP E EAQ AYM V + D
Sbjct: 115 EEARKYAQRATKVNEMLIEDAKKLLQLMGIPIIQAPSEGEAQAAYMASKGDVYASASQDY 174
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA + +N I RK YVE + ++ K+L +TREKLI +A+L+G
Sbjct: 175 DSLLFGAPRLIRNLTITGKRKMPGKDVYVEIKPELVVLDEVLKELKITREKLIELAILVG 234
Query: 983 SDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFR 1014
+DY G+ GIG A+E+V D L+KF+
Sbjct: 235 TDYNPGGVKGIGPKKALEIVRY--SRDPLAKFQ 265
>gi|375083121|ref|ZP_09730153.1| flap endonuclease-1 [Thermococcus litoralis DSM 5473]
gi|374742207|gb|EHR78613.1| flap endonuclease-1 [Thermococcus litoralis DSM 5473]
Length = 340
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 15/154 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E KK + A V+ + + ++LL++ G+P++ AP E EAQ AYM V + D
Sbjct: 115 EEAKKYAQRASKVNEMLIEDAKKLLELMGIPWVQAPSEGEAQAAYMASKGHVWASASQDY 174
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFG + +N I RK YVE ++++ K+L +TREKL+ +A+L+G
Sbjct: 175 DSLLFGTPRLVRNLTITGKRKLPGKDIYVEVKPELIVLEEVLKELKITREKLVELAILVG 234
Query: 983 SDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
+DY GI GIG A+E+V +D L+K+++
Sbjct: 235 TDYNPGGIKGIGPKKALEIVKY--SKDPLAKYQK 266
>gi|24987745|pdb|1MC8|A Chain A, Crystal Structure Of Flap Endonuclease-1 R42e Mutant From
Pyrococcus Horikoshii
gi|24987746|pdb|1MC8|B Chain B, Crystal Structure Of Flap Endonuclease-1 R42e Mutant From
Pyrococcus Horikoshii
Length = 343
Score = 85.5 bits (210), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/153 (37%), Positives = 84/153 (54%), Gaps = 15/153 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + A V+ + + ++LLQ+ G+P I AP E EAQ AYM V + D
Sbjct: 115 EEARKYAQRATKVNEMLIEDAKKLLQLMGIPIIQAPSEGEAQAAYMASKGDVYASASQDY 174
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA + +N I RK YVE + ++ K+L +TREKLI +A+L+G
Sbjct: 175 DSLLFGAPRLIRNLTITGKRKMPGKDVYVEIKPELVVLDEVLKELKITREKLIELAILVG 234
Query: 983 SDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFR 1014
+DY G+ GIG A+E+V D L+KF+
Sbjct: 235 TDYNPGGVKGIGPKKALEIVRY--SRDPLAKFQ 265
>gi|729476|sp|P39749.1|FEN1_MOUSE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|499649|gb|AAC37664.1| endonuclease-1 [Mus musculus]
Length = 378
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + +E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 96 AKRSERRAEAEKQLQQAQEAGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 155
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + + ++LG
Sbjct: 156 EAEASCAALAKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELG 215
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 216 LNQEQFVDLCILLGSDYCESIRGIGAKRAVDLIQ 249
>gi|390961742|ref|YP_006425576.1| flap endonuclease-1 [Thermococcus sp. CL1]
gi|390520050|gb|AFL95782.1| flap endonuclease-1 [Thermococcus sp. CL1]
Length = 341
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 88/163 (53%), Gaps = 17/163 (10%)
Query: 868 HEYMYLGD--EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
HE + GD E KK A V+ + + ++LL++ G+P I AP E EAQ AYM
Sbjct: 106 HEALERGDLEEAKKYAMRATRVNEGLINDAKKLLELMGIPVIQAPSEGEAQAAYMAAKKK 165
Query: 926 VDGVVTDDSDVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREK 973
V + D D LFGA + +N I RK YVE ++++ K+LG+ REK
Sbjct: 166 VYASASQDYDSLLFGAPRLVRNLTITGRRKLPGKNAYVEVKPELVVLEEVLKELGVDREK 225
Query: 974 LIRMALLLGSDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
LI MA+L+G+DY GI GIG A+ +V +D L K+++
Sbjct: 226 LIEMAILVGTDYNPGGIKGIGPKKALTIVKR--TKDPLRKYQK 266
>gi|358385848|gb|EHK23444.1| hypothetical protein TRIVIDRAFT_37094 [Trichoderma virens Gv29-8]
Length = 395
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYIIAP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ F +++ ++ + + + L + R++ + + +LLG DY + + +G
Sbjct: 185 FNTPILLRHLTFSEQRKEPIQEIRLDKVLEGLNMERDQFVDLCILLGCDYLDPVPKVGPT 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK----------RRSSDGD 1045
A++++ E L K E IE DP K+ + + R++ D
Sbjct: 245 TALKLIR---EHGSLEKVVEAIEK-DPK--KKYTLPEDWPYKDARELFFNPDVRQADDPL 298
Query: 1046 KDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
D + K + G+ +F + F ED+ A +N+K Q RLE F+
Sbjct: 299 CDFKWDKPDMEGLVQFLVTEKGFSEDRVRSGGARLEKNLK-----SSQQARLEGFF 349
>gi|13506617|gb|AAK01853.1| flap endonuclease-1 [Mus musculus]
Length = 378
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + +E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 96 AKRSERRAEAEKQLQQAQEAGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 155
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + + ++LG
Sbjct: 156 EAEASCAALAKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELG 215
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 216 LNQEQFVDLCILLGSDYCESIRGIGAKRAVDLIQ 249
>gi|157134745|ref|XP_001656421.1| hypothetical protein AaeL_AAEL000425 [Aedes aegypti]
gi|108884298|gb|EAT48523.1| AAEL000425-PA [Aedes aegypti]
Length = 744
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 4/152 (2%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
G E K + + +C+ELL GL + AP EAEA CAY+ +V GV++ D
Sbjct: 115 GTESKAPSEQKRNRFHHVLKQCEELLSSMGLVCVQAPGEAEALCAYLNHDGMVYGVISQD 174
Query: 934 SDVFLFGARSVYKNIFDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE-GI 989
SD F +GA V++N + V+ Y M I + L +EK++ M +L G DY+ G+
Sbjct: 175 SDCFAYGAVRVFRNFCASQSGGGSVDVYDMDKIRMVMDLGQEKIVAMGILSGCDYSPAGV 234
Query: 990 SGIGIVNAIEVVNAFPEEDGLSKFREWIESPD 1021
G+G ++N + D L++ R W + D
Sbjct: 235 PGVGREMINRLLNIYHSRDVLARIRSWRATAD 266
>gi|83773193|dbj|BAE63320.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 359
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 25/235 (10%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ + AEC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 89 KFSRRTVRVTRDHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 148
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F A + +++ F +++ +E + + +E L + R++ I + +LLG DY E I +G
Sbjct: 149 FEAPILLRHLTFSEQRKEPILEIHLSRALE-GLDMDRKQFIDLCILLGCDYLEPIPKVGP 207
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDP----TILGKFDVQTG----ASSRKRRSSDGDK 1046
A++++ F L K E +ES DP I + Q + R +S D
Sbjct: 208 NTALKLIREF---GSLEKVVEHMES-DPKKKYVIPEDWPYQDARELFLNPDVREASHPDC 263
Query: 1047 DVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
D + + G+ EF F+ED+ +A +N+K Q RLE F+
Sbjct: 264 DFKWEAPDIEGLVEFLVKDKGFNEDRVRNGAARLQKNLKTA-----QQSRLEGFF 313
>gi|391334775|ref|XP_003741776.1| PREDICTED: flap endonuclease 1-like [Metaseiulus occidentalis]
Length = 379
Score = 85.1 bits (209), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 20/165 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K +R VS + A+ Q LL + G+P+++AP EAEAQCA + A V T+D D
Sbjct: 125 KFQRRLVKVSKQHNADAQRLLALMGVPFLVAPCEAEAQCAELVKAQKVYAAATEDMDCLT 184
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FGA + +++ F + RK ++ + + I +L T+ + I + +LLG DY I GIG
Sbjct: 185 FGASVLLRHMTFSEARKMPIKEFNLPKILAELNFTQREFIDLCILLGCDYCGTIKGIGPK 244
Query: 996 NAIEVVNAF-----------------PEEDGLSKFREWIESPDPT 1023
AIE++ + PE+ + RE E PD T
Sbjct: 245 RAIELMRSHRCIENVLKNIDTKKYPPPEDWQFERARELFEKPDVT 289
>gi|26345786|dbj|BAC36544.1| unnamed protein product [Mus musculus]
Length = 411
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 85/154 (55%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + +E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 98 AKRSERRAEAEKQLQQAQEAGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 157
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDD---RKYVETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + ++ + + + ++LG
Sbjct: 158 EAEASCAALAKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELG 217
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 218 LNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|350631707|gb|EHA20078.1| hypothetical protein ASPNIDRAFT_48158 [Aspergillus niger ATCC 1015]
Length = 359
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 89 KFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 148
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ F +++ ++ + + LG+ R++ I + +LLG DY E I +G
Sbjct: 149 FETPILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPIPKVGPN 208
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDV----------QTGASSRKRRSSDGD 1045
A++++ + L K E++E+ DP KF V + + R ++D +
Sbjct: 209 TALKLIR---DHGSLEKVLEFMEN-DPK--KKFVVPEDWPYEDARELFLNPDVRDANDPE 262
Query: 1046 KDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
D + V G+ +F F+ED+ +A +N+K Q RLE F+
Sbjct: 263 CDFKWEAPDVPGLVDFLVKDKGFNEDRVKNGAARLQKNLKSA-----QQSRLEGFF 313
>gi|429964650|gb|ELA46648.1| hypothetical protein VCUG_01874 [Vavraia culicis 'floridensis']
Length = 720
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 74/139 (53%), Gaps = 36/139 (25%)
Query: 896 QELLQMFGLPYIIAPMEAEAQCAYM--------------------------------ELA 923
+++L + G+ YI AP E+++Q Y ++
Sbjct: 512 KKILNILGVSYIDAPYESDSQLGYFNNECASERSTRESTSKTEERYSYLGNNQVFNEKIY 571
Query: 924 NL-VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLG 982
NL VD V+T+D+DVFLFGA +YK+ F K Y MQ+I+ L L RE LI++++ +G
Sbjct: 572 NLKVDAVITEDNDVFLFGASRIYKDYFRGPK---LYTMQNIKNKLNLEREDLIKLSVFMG 628
Query: 983 SDYTEGISGIGIVNAIEVV 1001
+DYT GI GIG A+E++
Sbjct: 629 NDYTVGIRGIGPKKALEIL 647
>gi|58390636|ref|XP_317855.2| AGAP011448-PA [Anopheles gambiae str. PEST]
gi|74802123|sp|Q7Q323.2|FEN1_ANOGA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|55237026|gb|EAA13029.2| AGAP011448-PA [Anopheles gambiae str. PEST]
Length = 383
Score = 84.7 bits (208), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 26/233 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E +ELL++ G+PY+ AP EAEAQCA + A V T+D D
Sbjct: 125 KFNRRLVKVTKHHANEAKELLRLMGVPYVEAPCEAEAQCAALVRAGKVYATATEDMDALT 184
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ F + RK V+ + + + K LT+++ I + +LLG DY + I GIG
Sbjct: 185 FGSNILLRHLTFSEARKMPVQEFAYEKVLKGFELTQDEFIDLCILLGCDYCDTIRGIGPK 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRS-------SDGDK-D 1047
AIE++N + + K E ++ K+ V G + + R D D +
Sbjct: 245 KAIELIN---KHRSIEKILEHLDRQ------KYIVPEGWNYEQARKLFKEPEVQDADTIE 295
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH--TQLRLEAFY 1098
+ +++ G+ +F QF+ED+ KKI K+ TQ RL++F+
Sbjct: 296 LKWSEPDEEGLVKFLCGDRQFNEDR----IRSGAKKILKTKNTATQGRLDSFF 344
>gi|357608737|gb|EHJ66129.1| hypothetical protein KGM_15891 [Danaus plexippus]
Length = 722
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF- 949
+ EC+ LL+ G+ + EAEA CA + LVD VV+ DSD F +GA+ VY+N
Sbjct: 118 VLKECENLLRTMGVRCVKGRGEAEAACARLNAEGLVDAVVSQDSDCFAYGAKKVYRNFSV 177
Query: 950 -------DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
V+ Y + + G R K++ +ALL GSDY G+ G + ++
Sbjct: 178 SSAGGGGATHGSVDVYDAVKMFNNKGFGRNKMVALALLCGSDYGVGVCGSSKTTVVSFLH 237
Query: 1003 AFPEEDGLSKFREWIESP 1020
PE+ +S+ W+ P
Sbjct: 238 TVPEDQVISRLLSWVSDP 255
>gi|159475218|ref|XP_001695720.1| nuclease, Rad2 family [Chlamydomonas reinhardtii]
gi|317374883|sp|A8J2Z9.1|FEN1_CHLRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|158275731|gb|EDP01507.1| nuclease, Rad2 family [Chlamydomonas reinhardtii]
Length = 396
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 7/231 (3%)
Query: 874 GDEQ--KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
GD++ +K + + V+ E EC+ LL++ G+P + AP EAEAQCA M + LV G+ T
Sbjct: 119 GDQEAIEKYSKRSVRVTREHNDECKRLLRLMGVPVVEAPTEAEAQCAEMAKSGLVYGLAT 178
Query: 932 DDSDVFLFGARSVYKNIFDDRKY---VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEG 988
+D D FGA V +++ V+ + + ++L LT ++ I + +L+G DY
Sbjct: 179 EDMDALTFGAPRVIRHLMAPSSQNVPVQEFDREVALRELELTDDQFIDLCILMGCDYCGT 238
Query: 989 ISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV 1048
I GIG V A++++ +G+ K + + P P + + + S +
Sbjct: 239 IRGIGAVRALQMIKKHGSIEGMLKELDPAKYPVPEPFPHKESHEFFKNPEVTPSAEIPPL 298
Query: 1049 NYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAFYT 1099
+ G+ +F + QF+E Q + K K Q RLE+F+T
Sbjct: 299 KWTAPDEEGLVQFLVNEKQFNE--QRVRNAVGRIKANKTKANQGRLESFFT 347
>gi|145245469|ref|XP_001395002.1| DNA repair protein rad2 [Aspergillus niger CBS 513.88]
gi|317374885|sp|A5ABU3.1|FEN1_ASPNC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|134079702|emb|CAK97128.1| unnamed protein product [Aspergillus niger]
Length = 395
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 115/236 (48%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ F +++ ++ + + LG+ R++ I + +LLG DY E I +G
Sbjct: 185 FETPILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPIPKVGPN 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDV----------QTGASSRKRRSSDGD 1045
A++++ + L K E++E+ DP KF V + + R ++D +
Sbjct: 245 TALKLIR---DHGSLEKVLEFMEN-DPK--KKFVVPEDWPYEDARELFLNPDVRDANDPE 298
Query: 1046 KDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
D + V G+ +F F+ED+ +A +N+K Q RLE F+
Sbjct: 299 CDFKWEAPDVPGLVDFLVKDKGFNEDRVKNGAARLQKNLKSA-----QQSRLEGFF 349
>gi|148709394|gb|EDL41340.1| flap structure specific endonuclease 1, isoform CRA_a [Mus musculus]
Length = 396
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + +E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 114 AKRSERRAEAEKQLQQAQEAGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 173
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + + ++LG
Sbjct: 174 EAEASCAALAKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELG 233
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 234 LNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 267
>gi|312385968|gb|EFR30352.1| hypothetical protein AND_00127 [Anopheles darlingi]
Length = 385
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ + E +ELL++ G+PY+ AP EAEAQCA + A V T+D D
Sbjct: 125 KFNRRLVKVTKQHANEAKELLRLMGVPYVEAPCEAEAQCAALVKAGKVYATATEDMDALT 184
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ F + RK V+ + + + K LT ++ I M +LLG DY + I GIG
Sbjct: 185 FGSNILLRHLTFSEARKMPVQEFHYEKVLKGFELTADEFIDMCILLGCDYCDTIRGIGPK 244
Query: 996 NAIEVVN 1002
AIE++N
Sbjct: 245 KAIELIN 251
>gi|238506000|ref|XP_002384202.1| Flap endonuclease Rad27, putative [Aspergillus flavus NRRL3357]
gi|317151109|ref|XP_001824453.2| DNA repair protein rad2 [Aspergillus oryzae RIB40]
gi|317374884|sp|B8NV37.1|FEN1_ASPFN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|220690316|gb|EED46666.1| Flap endonuclease Rad27, putative [Aspergillus flavus NRRL3357]
gi|391868743|gb|EIT77953.1| 5'-3' exonuclease [Aspergillus oryzae 3.042]
Length = 395
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 25/235 (10%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ + AEC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTRDHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F A + +++ F +++ +E + + +E L + R++ I + +LLG DY E I +G
Sbjct: 185 FEAPILLRHLTFSEQRKEPILEIHLSRALE-GLDMDRKQFIDLCILLGCDYLEPIPKVGP 243
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDP----TILGKFDVQTG----ASSRKRRSSDGDK 1046
A++++ F L K E +ES DP I + Q + R +S D
Sbjct: 244 NTALKLIREF---GSLEKVVEHMES-DPKKKYVIPEDWPYQDARELFLNPDVREASHPDC 299
Query: 1047 DVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
D + + G+ EF F+ED+ +A +N+K Q RLE F+
Sbjct: 300 DFKWEAPDIEGLVEFLVKDKGFNEDRVRNGAARLQKNLKTA-----QQSRLEGFF 349
>gi|261402763|ref|YP_003246987.1| flap endonuclease-1 [Methanocaldococcus vulcanius M7]
gi|261369756|gb|ACX72505.1| flap structure-specific endonuclease [Methanocaldococcus vulcanius
M7]
Length = 326
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
DE K + A ++ ++ C+ LL + G+PY+ AP E EAQ +YM V VV+ D
Sbjct: 115 DEVAKFAKRASYLTPKIVDNCKYLLGLMGIPYVNAPSEGEAQASYMAKKGDVWAVVSQDY 174
Query: 935 DVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIG 993
D L+GA V +N+ ++ E + D+ ++L ++ + LI +A+L+G+DY G+ GIG
Sbjct: 175 DSLLYGAPRVVRNLTTTKEMPELINLDDVLEELRISLDDLIDIAILMGTDYNPGGVKGIG 234
Query: 994 IVNAIEVVNAFPEEDGLSK 1012
A E+V + +D L K
Sbjct: 235 FKRAYELVKSGVAKDVLKK 253
>gi|452840124|gb|EME42062.1| hypothetical protein DOTSEDRAFT_174868 [Dothistroma septosporum
NZE10]
Length = 393
Score = 84.7 bits (208), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 115/241 (47%), Gaps = 29/241 (12%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R V+ E AE Q LL++ G+P+IIAP EAEAQCA + A V ++D
Sbjct: 120 AEEVEKFSRRTVRVTREHNAEAQRLLKLMGVPFIIAPTEAEAQCAVLARAGKVYAAASED 179
Query: 934 SDVFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGIS 990
D F + + +++ F +++ ++ F+ + + L + +++ I + +LLG DY + +
Sbjct: 180 MDTLTFDSPVLLRHLTFSEQRKEPIQEIFLDRVLEGLEMDQKQFIDLCILLGCDYLDPVK 239
Query: 991 GIGIVNAIEVV-------NAFPEEDGLSKF---REWIESPDPTILGKFDVQTGASSRKRR 1040
GIG A+E++ N E SK+ +W + + + DV +
Sbjct: 240 GIGPKVALELIKKHKTLENVVEEIKKGSKYTLPEDWPFADARALFLEPDVH--------K 291
Query: 1041 SSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAF 1097
+ D D + V G+ +F F ED+ +A S+NMK Q RLE F
Sbjct: 292 ADHPDCDFKWESPDVEGLVKFLVEEKGFSEDRVRSGAARLSKNMK-----SSQQARLEGF 346
Query: 1098 Y 1098
+
Sbjct: 347 F 347
>gi|20071071|gb|AAH27295.1| Fen1 protein [Mus musculus]
Length = 380
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + +E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 98 AKRSERRAEAEKQLQQAQEAGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 157
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + + ++LG
Sbjct: 158 EAEASCAALAKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELG 217
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 218 LNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|409095300|ref|ZP_11215324.1| flap endonuclease-1 [Thermococcus zilligii AN1]
Length = 340
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 13/141 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E KK A V+ E+ ++ ++LL++ G+P + AP E EAQ AYM V + D
Sbjct: 115 EEAKKYAMRATRVNEELISDAKKLLELMGIPVVQAPSEGEAQAAYMAAKGKVYASASQDY 174
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA + +N I RK YVE ++++ K+LG+ REKLI +A+L+G
Sbjct: 175 DSLLFGAPKLVRNLTITGRRKLPGKEVYVEVKPELIVLEEVLKELGIDREKLIELAILVG 234
Query: 983 SDYTE-GISGIGIVNAIEVVN 1002
+DY GI GIG A+ +V
Sbjct: 235 TDYNPGGIKGIGPKKALMIVK 255
>gi|57641216|ref|YP_183694.1| flap endonuclease-1 [Thermococcus kodakarensis KOD1]
gi|73919352|sp|Q5JGN0.1|FEN_PYRKO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|57159540|dbj|BAD85470.1| flap structure-specific endonuclease [Thermococcus kodakarensis KOD1]
Length = 340
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 15/154 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E KK A V+ E+ + ++LL++ G+P + AP E EAQ AYM V + D
Sbjct: 115 EEAKKYAMRATRVNEELINDAKKLLELMGIPVVQAPSEGEAQAAYMAAKKAVYASASQDY 174
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA + +N I RK YVE ++++ K+LG+ REKLI +A+L+G
Sbjct: 175 DSLLFGAPRLVRNLTITGRRKLPGKNVYVEVKPELVVLEEVLKELGIDREKLIELAILVG 234
Query: 983 SDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
+DY GI GIG A+ +V +D L+K+++
Sbjct: 235 TDYNPGGIKGIGPKKALTIVKR--TKDPLAKYQK 266
>gi|26335423|dbj|BAC31412.1| unnamed protein product [Mus musculus]
Length = 380
Score = 84.3 bits (207), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + +E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 98 AKRSERRAEAEKQLQQAQEAGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 157
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + + ++LG
Sbjct: 158 EAEASCAALAKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELG 217
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 218 LNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|46048490|ref|NP_032025.2| flap endonuclease 1 [Mus musculus]
gi|410025484|ref|NP_001258543.1| flap endonuclease 1 [Mus musculus]
gi|410025486|ref|NP_001258544.1| flap endonuclease 1 [Mus musculus]
gi|16307328|gb|AAH10203.1| Flap structure specific endonuclease 1 [Mus musculus]
gi|26337949|dbj|BAC32660.1| unnamed protein product [Mus musculus]
gi|26347483|dbj|BAC37390.1| unnamed protein product [Mus musculus]
gi|53791234|dbj|BAD52443.1| flap endonuclease 1 [Mus musculus]
gi|74145457|dbj|BAE36169.1| unnamed protein product [Mus musculus]
gi|74150381|dbj|BAE32236.1| unnamed protein product [Mus musculus]
gi|74185061|dbj|BAE39135.1| unnamed protein product [Mus musculus]
gi|148709396|gb|EDL41342.1| flap structure specific endonuclease 1, isoform CRA_c [Mus musculus]
Length = 380
Score = 84.3 bits (207), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + +E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 98 AKRSERRAEAEKQLQQAQEAGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 157
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + + ++LG
Sbjct: 158 EAEASCAALAKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELG 217
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 218 LNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|320165003|gb|EFW41902.1| flap endonuclease 1-B [Capsaspora owczarzaki ATCC 30864]
Length = 388
Score = 84.3 bits (207), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 124/268 (46%), Gaps = 10/268 (3%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K +R V+ E EC+ LL + G+PYI AP EAEAQCA + + V T+D D
Sbjct: 125 KFQRRLVKVTKEHNEECKRLLTLMGVPYISAPCEAEAQCAALVKSGSVFAAGTEDMDALT 184
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG++ + +++ F + RK ++ + + + L LT E+ + + +LLG DY E I GIG
Sbjct: 185 FGSKVLLRHLTFSEARKMPIKEFNLDRALEGLKLTMEQFVDLCILLGCDYCESIKGIGPT 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNSV 1055
A ++ + + + K + + P P + +T + + D+ + V
Sbjct: 245 RAYALIQEYKTIEEIIKNLDTEKYPLPANWAFAEART-LFLEPEVTPGEELDLKWTAPDV 303
Query: 1056 GGVSEFDESISQFDEDKQSAEYSQNMKKI--FMDKHTQLRLEAFYTFNERFAKIRSKRIK 1113
G+ +F F ED+ N K+ TQ RL+ F+T + + R +
Sbjct: 304 EGLVKFMVQEKGFSEDR----IRNNAAKLVDLKSTATQGRLDNFFTVSGVVSSKRKSEEE 359
Query: 1114 KAVKGITGSQSLLLMDDAGQEVSKSRKK 1141
A + G S+ M G SKS+KK
Sbjct: 360 LAKEAKKGRMSVKSMVKGGSAASKSKKK 387
>gi|389852752|ref|YP_006354986.1| flap endonuclease-1 [Pyrococcus sp. ST04]
gi|388250058|gb|AFK22911.1| flap endonuclease-1 [Pyrococcus sp. ST04]
Length = 341
Score = 84.3 bits (207), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/169 (37%), Positives = 90/169 (53%), Gaps = 17/169 (10%)
Query: 861 EEMQILDHEYMYLGD--EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
EE +I E + GD E +K + A V+ + + ++LL++ G+P I AP E EAQ A
Sbjct: 99 EEAEIKWKEALAKGDIEEARKYAQRATRVNEMLIEDAKKLLELMGIPVIQAPSEGEAQAA 158
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKD 966
YM V + D D LFGA + +N I RK YVE + ++
Sbjct: 159 YMASKGKVYASASQDYDSLLFGAPRLVRNLTITGKRKLPGKNIYVEIKPELIVLDEVLSS 218
Query: 967 LGLTREKLIRMALLLGSDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFR 1014
L LTREKLI +A+L+G+DY GI GIG A+E+V +D L+KF+
Sbjct: 219 LKLTREKLIELAILVGTDYNPGGIKGIGPKKALEIVRH--SKDPLAKFQ 265
>gi|308806964|ref|XP_003080793.1| FEN-1 (ISS) [Ostreococcus tauri]
gi|116059254|emb|CAL54961.1| FEN-1 (ISS) [Ostreococcus tauri]
Length = 428
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 125/277 (45%), Gaps = 21/277 (7%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +KL + VS E E +L Q+ G+P AP EAEA CA M A LV V T+D
Sbjct: 161 EEVEKLSKRTVRVSKEQSMEVMKLAQLLGIPAFEAPCEAEATCAAMCKAGLVWAVGTEDM 220
Query: 935 DVFLFGARSVYKNIFDDRKYVETYFMQDIEKD---LGLTREKLIRMALLLGSDYTEGISG 991
D F A V +N+ + + D EK LGLT ++ I + +L G DYT+ I G
Sbjct: 221 DTLTFAAPRVARNLMAPKSAEKPVLEFDYEKTIAGLGLTADQFIDLCILCGCDYTDTIRG 280
Query: 992 IGIVNAIEVVNAFPEEDGLSKFREWIES---PDPTILGKFDVQTGASSRKRRSSDGDKDV 1048
+G A++++ E + K E I++ P P D + A +R+ + DV
Sbjct: 281 VGPKTALKLIK---EHGSIEKILEAIDTEKYPPPK-----DWEF-AGARELFKNPEVMDV 331
Query: 1049 NYAKNSVG-----GVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAFYTFNER 1103
+ S G+ EF QF ED+ ++K +Q RLE+F+ +
Sbjct: 332 SGINLSWKAPDEEGLVEFLVKEKQFQEDRVRG-VCARIRKARQGAASQNRLESFFGPPKI 390
Query: 1104 FAKIRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRK 1140
+ KR + K GS++ L G KS+K
Sbjct: 391 ISSTIGKRKVEETKSGKGSKAGLNKKSKGVSGYKSKK 427
>gi|115402747|ref|XP_001217450.1| DNA-repair protein rad2 [Aspergillus terreus NIH2624]
gi|114189296|gb|EAU30996.1| DNA-repair protein rad2 [Aspergillus terreus NIH2624]
Length = 402
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 132 KFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 191
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ ++ + + L + R K I + +LLG DY E I +G
Sbjct: 192 FEAPILLRHLTFSEQRKEPIQEIHLSRALEGLDMDRAKFIDLCILLGCDYLEPIPKVGPN 251
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDP----TILGKFDVQTG----ASSRKRRSSDGDKD 1047
A++++ + L K E+I++ DP I + Q R ++D + D
Sbjct: 252 TALKLIR---DHGSLEKVVEYIQN-DPKKKYVIPEDWPYQDARELFLHPDVRDANDPECD 307
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ + G+ EF F+ED+ +A +N+K Q RLE F+
Sbjct: 308 FKWEAPDIEGLVEFLVKDKGFNEDRVRNGAARLQKNLKTA-----QQSRLEGFF 356
>gi|213404598|ref|XP_002173071.1| exonuclease I Exo1 [Schizosaccharomyces japonicus yFS275]
gi|212001118|gb|EEB06778.1| exonuclease I Exo1 [Schizosaccharomyces japonicus yFS275]
Length = 566
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 6/128 (4%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
V+ EM L+ +P+++AP EA+ Q Y+E +DG++T+DSD+ +FGAR+V
Sbjct: 125 VTPEMANRFAMTLRQNNIPFVVAPYEADPQLVYLEKTGFIDGIITEDSDMLIFGARTVLF 184
Query: 947 NIFDDRKYVETYFMQDIEKDL-----GLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+ D+ + +DI + G L +A+ G DYT+GI GIG+ AI +
Sbjct: 185 KL-DNFGNCDVVRREDIPRLPNMSLQGFNDHMLRYLAIFSGCDYTDGIGGIGLKKAIRFI 243
Query: 1002 NAFPEEDG 1009
FP+ D
Sbjct: 244 QRFPKPDA 251
>gi|156398094|ref|XP_001638024.1| predicted protein [Nematostella vectensis]
gi|317374916|sp|A7RRJ0.1|FEN1_NEMVE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|156225141|gb|EDO45961.1| predicted protein [Nematostella vectensis]
Length = 377
Score = 84.0 bits (206), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E EC++LL++ G+PY+ AP EAEAQCA + + V T+D D
Sbjct: 125 KFSRRLVRVTKEHNEECKQLLKLMGIPYVEAPCEAEAQCAALVKSGKVYATGTEDMDALT 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ F + K ++ + +Q++ + GL++++ I + +LLG DY + I GIG
Sbjct: 185 FGTTVMLRHLTFSEAKKMPIKEFHLQNVLSEAGLSQDEFIDLCILLGCDYCDSIKGIGPK 244
Query: 996 NAIEVV 1001
+++++
Sbjct: 245 RSVDLI 250
>gi|150866513|ref|XP_001386143.2| 5'-3' exonuclease [Scheffersomyces stipitis CBS 6054]
gi|149387769|gb|ABN68114.2| 5'-3' exonuclease [Scheffersomyces stipitis CBS 6054]
Length = 676
Score = 84.0 bits (206), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Query: 884 AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARS 943
A SV+S+M L G+ YI+AP EA+ Q Y+E LVDG++++DSD+ +FG
Sbjct: 122 AASVTSQMAKSVMVELDARGIKYIVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGCNR 181
Query: 944 VYKNIFDDRKYVET-----YFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
+ + DD VE + ++ I ++E+L +A+L G DYT GI GIGI A
Sbjct: 182 LITKLKDDGTLVEICRQDFHKVKSIPYLSKFSQEQLRLIAMLSGCDYTNGIQGIGIKTAF 241
Query: 999 EVV 1001
+V
Sbjct: 242 NLV 244
>gi|302843818|ref|XP_002953450.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
gi|300261209|gb|EFJ45423.1| nuclease, Rad2 family [Volvox carteri f. nagariensis]
Length = 397
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 73/128 (57%), Gaps = 7/128 (5%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + + V+ E +C+ LL++ G+P + AP EAEAQCA M A LV G+ T+D D
Sbjct: 126 KYSKRSVRVTKEHNEDCKRLLRLMGVPVVEAPSEAEAQCAEMAKAGLVYGLATEDMDALT 185
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEK-----DLGLTREKLIRMALLLGSDYTEGISGIG 993
FGA V +++ +Q+I++ +LGL ++ I M +L+G DY I GIG
Sbjct: 186 FGAPRVIRHLMAPSS--SNVPVQEIDRAVALQELGLDDDQFIDMCILMGCDYCGTIRGIG 243
Query: 994 IVNAIEVV 1001
V A++++
Sbjct: 244 AVRALQLI 251
>gi|315230863|ref|YP_004071299.1| flap structure-specific endonuclease [Thermococcus barophilus MP]
gi|315183891|gb|ADT84076.1| flap structure-specific endonuclease [Thermococcus barophilus MP]
Length = 342
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 87/154 (56%), Gaps = 15/154 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E KK + A V+ ++ + ++LL++ G+P++ AP E EAQ AYM V + D
Sbjct: 115 EEAKKYAQRASRVNEQLIEDAKKLLELMGIPWVQAPSEGEAQAAYMASKGKVWASASQDY 174
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA + +N I RK YVE ++++ K+L + REKLI +A+L+G
Sbjct: 175 DSLLFGAPRLVRNLTITGRRKLPGKDVYVEVKPELIVLEEVLKELKIDREKLIELAILVG 234
Query: 983 SDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
+DY GI G+G A+E+V +D L K+++
Sbjct: 235 TDYNPGGIKGVGPKKALEIVRY--SKDPLKKYQK 266
>gi|194756700|ref|XP_001960614.1| GF13444 [Drosophila ananassae]
gi|317374888|sp|B3MDA3.1|FEN1_DROAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190621912|gb|EDV37436.1| GF13444 [Drosophila ananassae]
Length = 388
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 3/132 (2%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +K R V+ E E +ELL++ G+PY+ AP EAEAQCA + A V T+D D
Sbjct: 122 EIEKFNRRLVRVTKEHAREAKELLKLMGVPYVEAPCEAEAQCAALVKAGKVYATATEDMD 181
Query: 936 VFLFGARSV--YKNIFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
FG+ + Y + RK V+ + + + LG+ + I + +LLG DY E I GI
Sbjct: 182 ALTFGSTKLLRYLTYSEARKMPVKEFSYEKLLDGLGVNNREFIDLCILLGCDYCESIKGI 241
Query: 993 GIVNAIEVVNAF 1004
G AIE++N +
Sbjct: 242 GPKRAIELINNY 253
>gi|121704724|ref|XP_001270625.1| Flap endonuclease, putative [Aspergillus clavatus NRRL 1]
gi|119398771|gb|EAW09199.1| Flap endonuclease, putative [Aspergillus clavatus NRRL 1]
Length = 401
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 7/152 (4%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R V+ E AEC++LL++ G+PYI AP EAEAQCA + A V ++D
Sbjct: 126 AEEIEKFSRRTVRVTREHNAECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 185
Query: 934 SDVFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGIS 990
D F A + +++ F +++ ++ + + + L + R + I M +LLG DY E I
Sbjct: 186 MDTLCFEAPILLRHLTFSEQRKEPIQEIHLNRVLEGLDMDRSQFIDMCILLGCDYLEPIP 245
Query: 991 GIGIVNAIEVVNAFPEEDGLSKFREWIESPDP 1022
+G A++++ E L K E IES DP
Sbjct: 246 KVGPNTALKLIR---EHGSLEKVVEAIES-DP 273
>gi|296108985|ref|YP_003615934.1| flap structure-specific endonuclease [methanocaldococcus infernus ME]
gi|295433799|gb|ADG12970.1| flap structure-specific endonuclease [Methanocaldococcus infernus ME]
Length = 323
Score = 83.6 bits (205), Expect = 8e-13, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ + + V+ +M C+ LL + G+PY+ AP E EAQ +YM V VV+ D D
Sbjct: 113 ERARYFKRLSYVNKDMIENCKYLLSLMGIPYVQAPSEGEAQASYMAKKGDVWAVVSQDYD 172
Query: 936 VFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGI 994
L+GA V +N+ + +E + ++ ++L ++ + LI +A+++G+DY +GI GIG
Sbjct: 173 SLLYGAPRVVRNLTTTKDELELIELNEVLENLRISLDDLIDIAIMMGTDYNPKGIEGIGF 232
Query: 995 VNAIEVVNAFPEEDGLSK 1012
A E+V A +D L K
Sbjct: 233 KRAYEMVRARVAKDILKK 250
>gi|19112842|ref|NP_596050.1| exonuclease I Exo1 [Schizosaccharomyces pombe 972h-]
gi|1706728|sp|P53695.1|EXO1_SCHPO RecName: Full=Exodeoxyribonuclease 1; AltName:
Full=Exodeoxyribonuclease I; Short=EXO I;
Short=Exonuclease I
gi|703466|gb|AAC41648.1| exonuclease [Schizosaccharomyces pombe]
gi|4007793|emb|CAA22433.1| exonuclease I Exo1 [Schizosaccharomyces pombe]
Length = 571
Score = 83.6 bits (205), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 9/126 (7%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSV-- 944
V+ EM + L+ G+ I+AP EA+AQ Y+E N++DG++T+DSD+ +FGA++V
Sbjct: 125 VTPEMAWKLIIALREHGIESIVAPYEADAQLVYLEKENIIDGIITEDSDMLVFGAQTVLF 184
Query: 945 ----YKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEV 1000
+ N R+ + QD+ +L L EKL MA+ G DYT+G++G+G+ A+
Sbjct: 185 KMDGFGNCITIRRN-DIANAQDL--NLRLPIEKLRHMAIFSGCDYTDGVAGMGLKTALRY 241
Query: 1001 VNAFPE 1006
+ +PE
Sbjct: 242 LQKYPE 247
>gi|452004834|gb|EMD97290.1| hypothetical protein COCHEDRAFT_1220743 [Cochliobolus heterostrophus
C5]
Length = 395
Score = 83.6 bits (205), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYIIAP EAEAQCA + V ++D D
Sbjct: 125 KFSRRTVRVTKEHNAECQRLLKLMGIPYIIAPTEAEAQCAALAKGGKVYAAASEDMDTLT 184
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F + + +++ F +++ +E + + +E L + +++ I + +LLG DY + I GIG
Sbjct: 185 FASPILLRHLTFSEQRKEPILEIHLDKVLE-GLAMDQKQFIDLCILLGCDYLDPIKGIGP 243
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKR------RSSDGDK-D 1047
A++++ E L E I+S L D A +R +D + D
Sbjct: 244 STALKLIR---EHKDLEGVVEHIKSQSSKKLTIPDDWPFADARLLFLEPDVLPADAPECD 300
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFYTFNERF 1104
+ V G+ +F F+ED+ +A+ +NMK Q RLE F+ E+
Sbjct: 301 FKWEAPDVEGLVKFLVEEKHFNEDRVRNGAAKLQKNMKTA-----QQSRLEGFFKPIEKT 355
Query: 1105 AKIRSKRIKKA 1115
A+ ++ +KA
Sbjct: 356 AEEKATLKRKA 366
>gi|354503001|ref|XP_003513570.1| PREDICTED: flap endonuclease 1-like [Cricetulus griseus]
Length = 380
Score = 83.6 bits (205), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 87/154 (56%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + +E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 98 AKRSERRAEAEKQLQQAQEAGVEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 157
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + + ++LG
Sbjct: 158 EAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELG 217
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 218 LNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|317374926|sp|Q0CBS0.2|FEN1_ASPTN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 83.6 bits (205), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ ++ + + L + R K I + +LLG DY E I +G
Sbjct: 185 FEAPILLRHLTFSEQRKEPIQEIHLSRALEGLDMDRAKFIDLCILLGCDYLEPIPKVGPN 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDP----TILGKFDVQTG----ASSRKRRSSDGDKD 1047
A++++ + L K E+I++ DP I + Q R ++D + D
Sbjct: 245 TALKLIR---DHGSLEKVVEYIQN-DPKKKYVIPEDWPYQDARELFLHPDVRDANDPECD 300
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ + G+ EF F+ED+ +A +N+K Q RLE F+
Sbjct: 301 FKWEAPDIEGLVEFLVKDKGFNEDRVRNGAARLQKNLKTA-----QQSRLEGFF 349
>gi|157169412|ref|XP_001651504.1| flap endonuclease-1 [Aedes aegypti]
gi|122094730|sp|Q178M1.1|FEN1_AEDAE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|108878396|gb|EAT42621.1| AAEL005870-PA [Aedes aegypti]
Length = 380
Score = 83.6 bits (205), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 113/227 (49%), Gaps = 14/227 (6%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ + E +ELL++ G+PY+ AP EAEAQCA + V T+D D
Sbjct: 125 KFNRRLVKVTKQHSNEAKELLKLMGVPYVDAPCEAEAQCAALVKGGKVYATATEDMDALT 184
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ F + RK V+ + I + L LTR++ I + +LLG DY + I GIG
Sbjct: 185 FGSNILLRHLTFSEARKMPVQEFNYDKILQGLELTRDEFIDLCILLGCDYCDSIRGIGPK 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV--NYAKN 1053
A+E++N + + K E +++ + ++ Q K ++V + +
Sbjct: 245 KAVELIN---KHRTIEKILENLDTKKYVVPENWNYQQARVLFKEPEVANPEEVELKWGEP 301
Query: 1054 SVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH--TQLRLEAFY 1098
G+ ++ QF+ED+ A KKI K TQ RL++F+
Sbjct: 302 DEEGLVKYLCGDRQFNEDRIRA----GAKKILKTKSTATQGRLDSFF 344
>gi|148230426|ref|NP_001080960.1| flap endonuclease 1-A [Xenopus laevis]
gi|82071385|sp|P70040.1|FEN1A_XENLA RecName: Full=Flap endonuclease 1-A; Short=FEN-1-A; AltName:
Full=Flap structure-specific endonuclease 1-A;
Short=xFEN-1a
gi|1490870|gb|AAB06176.1| 5' nuclease xFEN1a [Xenopus laevis]
gi|4106358|gb|AAD02814.1| flap endonuclease 1 [Xenopus laevis]
gi|213623454|gb|AAI69765.1| 5' nuclease xFEN1a [Xenopus laevis]
gi|213625072|gb|AAI69761.1| 5' nuclease xFEN1a [Xenopus laevis]
Length = 382
Score = 83.2 bits (204), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFTKRLVKVTKQHNEECKKLLTLMGIPYVDAPCEAEATCAALVKAGKVYAAATEDMDALT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K ++ + + + +D+G+T E+ + + +LLGSDY E I GIG
Sbjct: 185 FGTPVLLRHLTASEAKKLPIQEFHLNRVIQDIGITHEQFVDLCILLGSDYCETIRGIGPK 244
Query: 996 NAIEVV 1001
AI+++
Sbjct: 245 RAIDLI 250
>gi|2674207|gb|AAB88707.1| flap endonuclease 1 [Xenopus laevis]
gi|115528353|gb|AAI24978.1| Fen1-A protein [Xenopus laevis]
Length = 382
Score = 83.2 bits (204), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFTKRLVKVTKQHNEECKKLLTLMGIPYVDAPCEAEATCAALVKAGKVYAAATEDMDALT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K ++ + + + +D+G+T E+ + + +LLGSDY E I GIG
Sbjct: 185 FGTPVLLRHLTASEAKKLPIQEFHLNRVIQDIGITHEQFVDLCILLGSDYCETIRGIGPK 244
Query: 996 NAIEVV 1001
AI+++
Sbjct: 245 RAIDLI 250
>gi|195431204|ref|XP_002063637.1| GK21315 [Drosophila willistoni]
gi|317374897|sp|B4MR84.1|FEN1_DROWI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194159722|gb|EDW74623.1| GK21315 [Drosophila willistoni]
Length = 388
Score = 83.2 bits (204), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 76/136 (55%), Gaps = 5/136 (3%)
Query: 874 GDEQK--KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
GDE + K R V+ E E +ELL++ G+PY+ AP EAEAQCA + A V T
Sbjct: 118 GDEAEIEKFNRRLVRVTKEHAREAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 932 DDSDVFLFGARSV--YKNIFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEG 988
+D D FG+ + Y + RK V+ + + + + L L + + I + +LLG DY E
Sbjct: 178 EDMDALTFGSSKLLRYLTYSEARKMPVKEFTYEKLLQGLELNQREFIDLCILLGCDYCES 237
Query: 989 ISGIGIVNAIEVVNAF 1004
I GIG AIE++N++
Sbjct: 238 IKGIGPKRAIELINSY 253
>gi|15669635|ref|NP_248448.1| flap endonuclease-1 [Methanocaldococcus jannaschii DSM 2661]
gi|17432937|sp|Q58839.1|FEN_METJA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|157829719|pdb|1A76|A Chain A, Flap Endonuclease-1 From Methanococcus Jannaschii
gi|157829720|pdb|1A77|A Chain A, Flap Endonuclease-1 From Methanococcus Jannaschii
gi|1592090|gb|AAB99454.1| DNA repair protein RAD2 (rad2) [Methanocaldococcus jannaschii DSM
2661]
Length = 326
Score = 83.2 bits (204), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 7/176 (3%)
Query: 844 TKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFG 903
T+ + E E ++E ++ D E E K + ++ +M C+ LL + G
Sbjct: 90 TRKVRREMKEKAELKMKEAIKKEDFE------EAAKYAKRVSYLTPKMVENCKYLLSLMG 143
Query: 904 LPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDI 963
+PY+ AP E EAQ +YM V VV+ D D L+GA V +N+ ++ E + ++
Sbjct: 144 IPYVEAPSEGEAQASYMAKKGDVWAVVSQDYDALLYGAPRVVRNLTTTKEMPELIELNEV 203
Query: 964 EKDLGLTREKLIRMALLLGSDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFREWIE 1018
+DL ++ + LI +A+ +G+DY G+ GIG A E+V + +D L K E+ +
Sbjct: 204 LEDLRISLDDLIDIAIFMGTDYNPGGVKGIGFKRAYELVRSGVAKDVLKKEVEYYD 259
>gi|432089490|gb|ELK23431.1| Flap endonuclease 1 [Myotis davidii]
Length = 380
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + +E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 98 AKRSERRAEAEKQLHQAQAAGAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 157
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + I ++LG
Sbjct: 158 EAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELG 217
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 218 LNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|317374931|sp|A1CJ75.2|FEN1_ASPCL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 83/152 (54%), Gaps = 7/152 (4%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R V+ E AEC++LL++ G+PYI AP EAEAQCA + A V ++D
Sbjct: 120 AEEIEKFSRRTVRVTREHNAECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 179
Query: 934 SDVFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGIS 990
D F A + +++ F +++ ++ + + + L + R + I M +LLG DY E I
Sbjct: 180 MDTLCFEAPILLRHLTFSEQRKEPIQEIHLNRVLEGLDMDRSQFIDMCILLGCDYLEPIP 239
Query: 991 GIGIVNAIEVVNAFPEEDGLSKFREWIESPDP 1022
+G A++++ E L K E IES DP
Sbjct: 240 KVGPNTALKLIR---EHGSLEKVVEAIES-DP 267
>gi|407847469|gb|EKG03173.1| DNA repair protein RAD2, putative [Trypanosoma cruzi]
Length = 744
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQD 962
G+P++++P EA+AQCA++ LVD V ++DSDV + GA V + F +YV Y D
Sbjct: 470 GIPFVLSPHEADAQCAFLSQQRLVDAVFSEDSDVIVHGANVVLRGFFSKNRYVVVYRQSD 529
Query: 963 IEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL 1010
+ G+ ++ L+ +ALLLG DY EG+ G+ ++ A+ ++ AF ++ +
Sbjct: 530 LAM-CGVDKDVLVALALLLGCDYAEGVDGVSLLEALRIITAFWHQESV 576
>gi|341583087|ref|YP_004763579.1| flap endonuclease-1 [Thermococcus sp. 4557]
gi|340810745|gb|AEK73902.1| flap endonuclease-1 [Thermococcus sp. 4557]
Length = 341
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 842 FATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQM 901
F K IE EA E+ E+ + L+ + +E KK A V+ + + + LL++
Sbjct: 86 FKKKEIEK-RREAREEAKEKWYEALERGNL---EEAKKYAMRATRVNEGLINDAKRLLEL 141
Query: 902 FGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKN--IFDDRK------ 953
G+P I AP E EAQ AYM V + D D LFGA + +N I RK
Sbjct: 142 MGIPVIQAPSEGEAQAAYMAARKKVYASASQDYDSLLFGAPRLVRNVTITGRRKLPGKNV 201
Query: 954 YVET----YFMQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIGIVNAIEVVNAFPEED 1008
YVE ++++ K+LG+ REKLI MA+L+G+DY GI GIG A+ +V +D
Sbjct: 202 YVEVRPELIVLEEVLKELGIDREKLIEMAILVGTDYNPGGIKGIGPKKALTIVKR--TKD 259
Query: 1009 GLSKF 1013
L K+
Sbjct: 260 PLKKY 264
>gi|406604572|emb|CCH43989.1| Exonuclease 1 [Wickerhamomyces ciferrii]
Length = 649
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 874 GDEQKKLERNAESV--SSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
GD++ E ++SV + M E L+ + YI+AP EA+ Q Y+E LVDG+++
Sbjct: 110 GDKKGAFEFFSKSVDITPAMAKAVIEYLKEEKIKYIVAPYEADPQMVYLEKLGLVDGIIS 169
Query: 932 DDSDVFLFGARSVYKNIFDDRKYVETY---FMQDIEKDLGLTRE-KLIRMALLLGSDYTE 987
+DSD+ +FGA+ + + D ++V+ F E +GL + +LI +A L G DYT
Sbjct: 170 EDSDLLVFGAQHLLTKLNDTAQFVDIRRENFKNCKEVPIGLIDDSQLIMVACLSGCDYTS 229
Query: 988 GISGIGIVNAIEVV 1001
G+ G+GIV A ++V
Sbjct: 230 GVPGVGIVTAFKLV 243
>gi|308504826|ref|XP_003114596.1| CRE-CRN-1 protein [Caenorhabditis remanei]
gi|308258778|gb|EFP02731.1| CRE-CRN-1 protein [Caenorhabditis remanei]
Length = 382
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 20/168 (11%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +K ER V+ + + ++LL + G+P + AP EAEAQCA++ A V G T+D D
Sbjct: 122 EAEKFERRLVKVTKQQNEDVKQLLGLMGIPVVEAPCEAEAQCAHLVKAGKVFGTATEDMD 181
Query: 936 VFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
FG+ + +++ + +K ++ + + I +++ LT E+ I + +LLG DY I G+
Sbjct: 182 ALTFGSCVLLRHLLAPESKKIPIKEFHLARILEEMKLTEEEFIDLCILLGCDYCGTIRGV 241
Query: 993 GIVNAIEVVNAF-----------------PEEDGLSKFREWIESPDPT 1023
G A+E++N + PE+ + RE PD T
Sbjct: 242 GPKRAVELINQYKNIETILENIDLTKYPPPEDWPYKRARELFLQPDVT 289
>gi|71425588|ref|XP_813131.1| DNA repair protein RAD2 [Trypanosoma cruzi strain CL Brener]
gi|70877987|gb|EAN91280.1| DNA repair protein RAD2, putative [Trypanosoma cruzi]
Length = 744
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQD 962
G+P++++P EA+AQCA++ LVD V ++DSDV + GA V + F +YV Y D
Sbjct: 470 GIPFVLSPHEADAQCAFLSQQRLVDAVFSEDSDVIVHGANVVLRGFFSKNRYVVVYRQSD 529
Query: 963 IEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL 1010
+ G+ ++ L+ +ALLLG DY EG+ G+ ++ A+ ++ AF ++ +
Sbjct: 530 LAM-CGVDKDVLVALALLLGCDYAEGVDGVSLLEALRIITAFWHQESV 576
>gi|358394482|gb|EHK43875.1| hypothetical protein TRIATDRAFT_300264 [Trichoderma atroviride IMI
206040]
Length = 395
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 108/233 (46%), Gaps = 21/233 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYIIAP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ F +++ ++ + + + L + R++ + + +LLG DY + + +G
Sbjct: 185 FNTPILLRHLTFSEQRKEPIQEIHLDRVLEGLNMERKQFVDLCILLGCDYLDPVPKVGPT 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK-------RRSSDGDKDV 1048
A++++ E L K E IE + +R+ R++ D D
Sbjct: 245 TALKLIR---EHGSLEKVVEAIEKDSKKKYTLPEDWPYKDARELFFNPDVRQADDPLCDF 301
Query: 1049 NYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ K + G+ F + F ED+ A +N+K Q RLE F+
Sbjct: 302 KWEKPDMEGLVTFLVTEKGFSEDRVRSAGARLEKNLK-----SSQQARLEGFF 349
>gi|322708426|gb|EFZ00004.1| DNA-repair protein rad2 [Metarhizium anisopliae ARSEF 23]
Length = 395
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 33/239 (13%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+P+IIAP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQRLLKLMGIPFIIAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ F +++ ++ + + + L + R + + + +LLG DY + + +G
Sbjct: 185 FNTPILLRHLTFSEQRKEPIQEIHLDKVLEGLNMERSQFVDLCILLGCDYLDPVPKVGPT 244
Query: 996 NAIE----------VVNAFPEEDGLSKF---REWIESPDPTILGKFDVQTGASSRKRRSS 1042
A++ VV+A E+D K+ +W + + DV R++
Sbjct: 245 TALKLIREHGTLENVVDAI-EKDSKKKYTLPEDWPYKDARDLFFEPDV--------RKAD 295
Query: 1043 DGDKDVNYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEAFY 1098
D D + K V G+ F + F ED+ +A +N+K Q RLE F+
Sbjct: 296 DPLCDFKWDKPDVEGLVTFLVTEKGFSEDRVRGAAARLEKNLK-----TSQQARLEGFF 349
>gi|301781710|ref|XP_002926265.1| PREDICTED: flap endonuclease 1-like [Ailuropoda melanoleuca]
gi|281345366|gb|EFB20950.1| hypothetical protein PANDA_015901 [Ailuropoda melanoleuca]
Length = 380
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ E+ E E Q+ + + +E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 98 AKRGERRAEAEKQLQQAQAAGVEEEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLDAPS 157
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + I ++LG
Sbjct: 158 EAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELG 217
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 218 LNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|317374922|sp|Q013G9.2|FEN1_OSTTA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 389
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 125/277 (45%), Gaps = 21/277 (7%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +KL + VS E E +L Q+ G+P AP EAEA CA M A LV V T+D
Sbjct: 122 EEVEKLSKRTVRVSKEQSMEVMKLAQLLGIPAFEAPCEAEATCAAMCKAGLVWAVGTEDM 181
Query: 935 DVFLFGARSVYKNIFDDRKYVETYFMQDIEKD---LGLTREKLIRMALLLGSDYTEGISG 991
D F A V +N+ + + D EK LGLT ++ I + +L G DYT+ I G
Sbjct: 182 DTLTFAAPRVARNLMAPKSAEKPVLEFDYEKTIAGLGLTADQFIDLCILCGCDYTDTIRG 241
Query: 992 IGIVNAIEVVNAFPEEDGLSKFREWIES---PDPTILGKFDVQTGASSRKRRSSDGDKDV 1048
+G A++++ E + K E I++ P P D + A +R+ + DV
Sbjct: 242 VGPKTALKLIK---EHGSIEKILEAIDTEKYPPPK-----DWEF-AGARELFKNPEVMDV 292
Query: 1049 NYAKNSVG-----GVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAFYTFNER 1103
+ S G+ EF QF ED+ ++K +Q RLE+F+ +
Sbjct: 293 SGINLSWKAPDEEGLVEFLVKEKQFQEDRVRG-VCARIRKARQGAASQNRLESFFGPPKI 351
Query: 1104 FAKIRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRK 1140
+ KR + K GS++ L G KS+K
Sbjct: 352 ISSTIGKRKVEETKSGKGSKAGLNKKSKGVSGYKSKK 388
>gi|444513068|gb|ELV10260.1| Flap endonuclease 1 [Tupaia chinensis]
Length = 380
Score = 83.2 bits (204), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 74/127 (58%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC+ LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFSKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ + +K ++ + + I ++LGL++E+ + + +LLGSDY E I GIG
Sbjct: 185 FGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLSQEQFVDLCILLGSDYCESIRGIGPK 244
Query: 996 NAIEVVN 1002
A++++
Sbjct: 245 RAVDLIQ 251
>gi|393219213|gb|EJD04700.1| hypothetical protein FOMMEDRAFT_153772 [Fomitiporia mediterranea
MF3/22]
Length = 1041
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 26/154 (16%)
Query: 870 YMYLGDEQKKLERNAESVSSE---MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+++ G + +L+R + +S + M + QE+++ FG + AP EAEA+ AY+ ++
Sbjct: 144 FVFDGPRRPELKRK-KKISGKDHWMVSGMQEIIEAFGFEWWCAPGEAEAELAYLNRIGVI 202
Query: 927 DGVVTDDSDVFLFGARSVYKNIF-----------------DDRKYVETYFMQDI--EKDL 967
D ++TDD D F+FGA + +N DD ++ TY DI ++
Sbjct: 203 DAIITDDVDTFVFGATMIMRNPGKMLSGNTSHPIKNTAGKDDGEHTYTYTSSDILEHAEV 262
Query: 968 GLTREKLIRMALLLGSDY-TEGISGIG--IVNAI 998
G+TR LI +ALL G DY EGI G G I +A+
Sbjct: 263 GITRGGLILIALLRGGDYDPEGIDGFGANIAHAL 296
>gi|261244970|ref|NP_001159668.1| flap endonuclease 1 [Ovis aries]
gi|317376193|sp|C8BKD0.1|FEN1_SHEEP RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|256665367|gb|ACV04829.1| flap structure-specific endonuclease 1 [Ovis aries]
Length = 380
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 75/130 (57%), Gaps = 3/130 (2%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +K + V+ + EC+ LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 122 EVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMD 181
Query: 936 VFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
FG+ + +++ + +K ++ + + I ++LGL +E+ + + +LLGSDY E I GI
Sbjct: 182 CLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGI 241
Query: 993 GIVNAIEVVN 1002
G A++++
Sbjct: 242 GPKRAVDLIQ 251
>gi|403255047|ref|XP_003920260.1| PREDICTED: flap endonuclease 1 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403255049|ref|XP_003920261.1| PREDICTED: flap endonuclease 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC+ LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ + +K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG
Sbjct: 185 FGSPVLMRHLTASESKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPK 244
Query: 996 NAIEVVN 1002
A++++
Sbjct: 245 RAVDLIQ 251
>gi|410974093|ref|XP_003993482.1| PREDICTED: flap endonuclease 1 [Felis catus]
Length = 380
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + V+ + EC+ LL + G+PY+ AP EAEA CA + A V T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 935 DVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D FG+ + +++ + +K ++ + + + ++LGL +E+ + + +LLGSDY E I G
Sbjct: 181 DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYCESIRG 240
Query: 992 IGIVNAIEVVN 1002
IG A++++
Sbjct: 241 IGPKRAVDLIQ 251
>gi|198477405|ref|XP_002136633.1| GA27689 [Drosophila pseudoobscura pseudoobscura]
gi|317374893|sp|B5DUR8.1|FEN1_DROPS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|198142925|gb|EDY71637.1| GA27689 [Drosophila pseudoobscura pseudoobscura]
Length = 386
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 26/236 (11%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +K R V+ E E +ELL + G+PY+ AP EAEAQCA + A V T+D D
Sbjct: 122 EIEKFNRRLVRVTKEHAREAKELLSLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMD 181
Query: 936 VFLFGARSV--YKNIFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
FG+ + Y + RK V+ + + + L + + I + +LLG DY E I GI
Sbjct: 182 ALTFGSTKLLRYLTYSEARKMPVKEFSYDKLLEGLEVNNREFIDLCILLGCDYCESIKGI 241
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRS-------SDGD 1045
G AIE++N + + + + +++ D + K+ V + + R +D
Sbjct: 242 GPKRAIELINNYRDIETI------LDNLDTS---KYTVPENWNYKVARELFIEPEVADAS 292
Query: 1046 K-DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH--TQLRLEAFY 1098
D+ + + G+ +F QF E++ KK+F KH TQ+RL++F+
Sbjct: 293 AIDLKWTEPDEEGLVKFLCGDRQFSEER----VRNGAKKLFKSKHAQTQVRLDSFF 344
>gi|146171182|ref|XP_001470841.1| flap endonuclease-1 [Tetrahymena thermophila]
gi|317376196|sp|A4VDN2.1|FEN1_TETTS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|146145019|gb|EDK31639.1| flap endonuclease-1 [Tetrahymena thermophila SB210]
Length = 384
Score = 82.8 bits (203), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 7/148 (4%)
Query: 874 GDEQKKL---ERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVV 930
GD Q+ L +RN ++ EM A+ +LLQ+ G+P I+AP EAEAQCA + A V V
Sbjct: 122 GDMQEALKQEQRNLH-ITKEMKADAIKLLQLVGVPVILAPCEAEAQCAALAKAKKVFATV 180
Query: 931 TDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGIS 990
T+D D F + +N+ ++ + + + ++L L+ + + + +L G DY I
Sbjct: 181 TEDMDALTFATPFLLRNLNSKKEPITEINYEKMLQELKLSHNEFVDLCILCGCDYLGRIE 240
Query: 991 GIGIVNAIEVVNAFPEEDGLSKFREWIE 1018
G+G VNA +++ E L K E +E
Sbjct: 241 GVGPVNAFKLIT---EHKSLEKVLEHME 265
>gi|13541391|ref|NP_111079.1| flap endonuclease-1 [Thermoplasma volcanium GSS1]
gi|28380020|sp|Q97B98.1|FEN_THEVO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|14324774|dbj|BAB59701.1| FLAP endonuclease-1 [Thermoplasma volcanium GSS1]
Length = 335
Score = 82.8 bits (203), Expect = 2e-12, Method: Composition-based stats.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 25/215 (11%)
Query: 803 PLVKTSGNASIYDTDIEQKSA---EERTPDTYLKDSKQNTGIFATKAIENVHAEATEKIL 859
PL+ +SGN + + I ++ E ++ D K + T I + E + L
Sbjct: 46 PLMDSSGNVTSHLYGIFYRTVNLVENGIKPIFVFDGKPSPLKNRTLEIRQLAKEKAKAEL 105
Query: 860 EEEMQILDHEYMYLGDEQ-KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
EE + G+E K+ ++ ++ + +ELL G+PY+ AP E EAQ +
Sbjct: 106 EEAIS--------RGEENLKQYYSRINYITPQIVNDTKELLTYMGIPYVDAPSEGEAQAS 157
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKN--IFDDRK----------YVETYFMQDIEKD 966
YM + DGV++ D D LFGA+ + +N I+ RK Y E + ++ K
Sbjct: 158 YMTRKD-ADGVISQDYDCLLFGAKKILRNFAIYGRRKVPRKNVYRTVYPEYVMLDEVLKK 216
Query: 967 LGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
G+ +++LI + +L+G+D+ EGI GIG A+ ++
Sbjct: 217 NGINQDQLIEIGILVGTDFNEGIKGIGAKKALALI 251
>gi|344258300|gb|EGW14404.1| Flap endonuclease 1 [Cricetulus griseus]
Length = 412
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 85/151 (56%), Gaps = 3/151 (1%)
Query: 855 TEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAE 914
+E+ E E Q+ + + +E +K + V+ + EC+ LL + G+PY+ AP EAE
Sbjct: 133 SERRAEAEKQLQQAQEAGVEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAE 192
Query: 915 AQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTR 971
A CA + A V T+D D FG+ + +++ + +K ++ + + + ++LGL +
Sbjct: 193 ASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQ 252
Query: 972 EKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
E+ + + +LLGSDY E I GIG A++++
Sbjct: 253 EQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 283
>gi|194377686|dbj|BAG63206.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC+ LL + G+PY+ AP EAEA CA + A V T+D D FG+ + +++ +
Sbjct: 104 ECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEA 163
Query: 952 RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG A++++
Sbjct: 164 KKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 215
>gi|328773336|gb|EGF83373.1| hypothetical protein BATDEDRAFT_22008 [Batrachochytrium dendrobatidis
JAM81]
Length = 388
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 26/233 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
+ R V+ E EC+ LL++ G+P + AP EAEAQCA + A V ++D D
Sbjct: 126 RFSRRTVKVTKEQNQECRRLLKLMGIPIVEAPCEAEAQCAALAKAGKVYAAGSEDMDTLT 185
Query: 939 FGARSVYKNI-FDDRKYVET--YFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FGA + +++ F + K + + Q + + L + ++ I + +LLG DY + I GIG
Sbjct: 186 FGAPVLLRHLTFSEAKKIPISEFNTQKVLEGLNFSHDEFIDLCILLGCDYCDSIRGIGPH 245
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV------- 1048
A++++ + + I+S D T K+ V ++ R + DV
Sbjct: 246 RAVQLMKEHRTIENI------IKSIDKT---KYKVPENWPFKEARQLFKEPDVLDPATVE 296
Query: 1049 -NYAKNSVGGVSEFDESISQFDED--KQSAEYSQNMKKIFMDKHTQLRLEAFY 1098
N+ K G+ +F + F ED K++AE + M TQ RL+ F+
Sbjct: 297 LNWTKPDEAGLLQFLVTEKGFSEDRVKKAAERLSKL----MGTATQGRLDGFF 345
>gi|71421804|ref|XP_811914.1| DNA repair protein RAD2 [Trypanosoma cruzi strain CL Brener]
gi|70876631|gb|EAN90063.1| DNA repair protein RAD2, putative [Trypanosoma cruzi]
Length = 744
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQD 962
G+P++++P EA+AQCA++ LVD V ++DSDV + GA V + F +YV Y D
Sbjct: 470 GIPFVLSPHEADAQCAFLSQQRLVDAVFSEDSDVIVHGADVVLRGFFSKNRYVVVYRQSD 529
Query: 963 IEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL 1010
+ G+ ++ L+ +ALLLG DY EG+ G+ ++ A+ ++ AF ++ +
Sbjct: 530 LAM-CGVDKDVLVALALLLGCDYAEGVDGVSLLEALRIITAFWHQESV 576
>gi|67524613|ref|XP_660368.1| hypothetical protein AN2764.2 [Aspergillus nidulans FGSC A4]
gi|74597180|sp|Q5B9L6.1|FEN1_EMENI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|40744016|gb|EAA63198.1| hypothetical protein AN2764.2 [Aspergillus nidulans FGSC A4]
gi|259486319|tpe|CBF84062.1| TPA: 5' to 3' exonuclease, 5' flap endonuclease (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 395
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ ++ + + LG+ R + I + +LLG DY E I +G
Sbjct: 185 FEAPILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRNQFIDLCILLGCDYLEPIPKVGPN 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDP----TILGKFDVQTG----ASSRKRRSSDGDKD 1047
A++++ + L K E IE DP I + Q + R ++D + D
Sbjct: 245 TALKLIR---DHGTLEKVVESIEK-DPKQKYVIPESWPYQDARELFLNPDVRDANDPECD 300
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ + G+ +F F+ED+ +A +N+K Q RLE F+
Sbjct: 301 FKWEAPDIEGLVDFLVKDKGFNEDRVRNGAARLQKNLKTA-----QQSRLEGFF 349
>gi|407408222|gb|EKF31745.1| DNA repair protein RAD2, putative [Trypanosoma cruzi marinkellei]
Length = 734
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQD 962
G+P++++P EA+AQCA++ LVD V ++DSDV + GA V + F +YV Y D
Sbjct: 460 GIPFVLSPHEADAQCAFLSQQRLVDAVFSEDSDVIVHGATVVLRGFFSKNRYVVVYRQSD 519
Query: 963 IEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL 1010
+ G+ ++ L+ +ALLLG DY EG+ G+ ++ A+ ++ AF ++ +
Sbjct: 520 LAM-CGVDKDVLVALALLLGCDYAEGVDGVSLLEALRIIAAFWHQESV 566
>gi|150401914|ref|YP_001325680.1| flap endonuclease-1 [Methanococcus aeolicus Nankai-3]
gi|166973699|sp|A6UX46.1|FEN_META3 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|150014617|gb|ABR57068.1| XPG I [Methanococcus aeolicus Nankai-3]
Length = 326
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 895 CQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKY 954
C++LL++ G+PYI AP E EAQCA+M VV+ D D L+GA +NI K
Sbjct: 135 CKKLLKLMGIPYIDAPSEGEAQCAHMIKNGDAYCVVSQDYDALLYGAPRTVRNITASNKP 194
Query: 955 VETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVV 1001
+E ++DI K L ++ + LI MA+L+G+DY GI GIG A+ ++
Sbjct: 195 LELMEIEDILKPLDISIDDLIDMAILIGTDYNIGGIKGIGPKKALTII 242
>gi|296218462|ref|XP_002755459.1| PREDICTED: flap endonuclease 1 [Callithrix jacchus]
Length = 380
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC+ LL + G+PY+ AP EAEA CA + A V T+D D FG+ + +++ +
Sbjct: 140 ECKRLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASES 199
Query: 952 RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG A++++
Sbjct: 200 KKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|395545349|ref|XP_003774565.1| PREDICTED: flap endonuclease 1 [Sarcophilus harrisii]
Length = 380
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 74/127 (58%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC+ LL++ G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFAKRLVKVTKQHNEECKRLLRLMGIPYLEAPSEAEASCAALVKAGKVYAAATEDMDCLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ + +K ++ + + + + LGLT+E+ + + +LLGSDY E I GIG
Sbjct: 185 FGSPVLMRHLTASEAKKLPIQEFHLSRVLQGLGLTQEQFVDLCILLGSDYCESIRGIGPK 244
Query: 996 NAIEVVN 1002
A++++
Sbjct: 245 RAMDLIQ 251
>gi|195014132|ref|XP_001983964.1| GH15274 [Drosophila grimshawi]
gi|193897446|gb|EDV96312.1| GH15274 [Drosophila grimshawi]
Length = 749
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 9/135 (6%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI-- 948
+ +C+ LL G+ + P EAEA CA++ LVDGV++ DSD F +GAR VY+N
Sbjct: 126 VLKQCENLLLSMGIQCVQGPGEAEAYCAFLNKYGLVDGVISQDSDCFAYGARRVYRNFSV 185
Query: 949 ------FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIEVV 1001
V+ Y MQ+I + ++K+I MALL G DY +GI GIG +++
Sbjct: 186 STQGAQAAAGGAVDIYDMQEICTRIDFGQQKVIVMALLCGCDYCPDGIGGIGKDGVLKLF 245
Query: 1002 NAFPEEDGLSKFREW 1016
N + E + L + R W
Sbjct: 246 NMYKESEILDRLRTW 260
>gi|81883819|sp|Q5XIP6.1|FEN1_RAT RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|53733451|gb|AAH83630.1| Fen1 protein [Rattus norvegicus]
gi|149062370|gb|EDM12793.1| flap structure-specific endonuclease 1 [Rattus norvegicus]
Length = 380
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + V+ + EC+ LL + G+PY+ AP EAEA CA + A V T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDM 180
Query: 935 DVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D FG+ + +++ + +K ++ + + + ++LGL +E+ + + +LLGSDY E + G
Sbjct: 181 DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYCESVRG 240
Query: 992 IGIVNAIEVVN 1002
IG A++++
Sbjct: 241 IGPKRAVDLIQ 251
>gi|147920854|ref|YP_685339.1| flap endonuclease-1 [Methanocella arvoryzae MRE50]
gi|121690538|sp|Q0W6I0.1|FEN_UNCMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|110620735|emb|CAJ36013.1| flap structure-specific endonuclease [Methanocella arvoryzae MRE50]
Length = 340
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 14/136 (10%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + + S++ ++ + + LL G+P+I+AP E EAQ AYM D V + D D L
Sbjct: 118 KYAQASTSINRQIVDDAKVLLGYMGIPFIVAPSEGEAQAAYMVSRGAADYVGSQDYDSLL 177
Query: 939 FGARSVY-------------KNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
FGA V KNI+ D K E +Q++ LGLTRE+LI MA+L+G+DY
Sbjct: 178 FGAPRVVRNIAITGKRKVPRKNIYMDVK-PEVIELQEVLATLGLTREELIDMAILVGTDY 236
Query: 986 TEGISGIGIVNAIEVV 1001
GI +G A+++V
Sbjct: 237 NPGIFKVGPKTALKLV 252
>gi|388454741|ref|NP_001252879.1| flap endonuclease 1 [Macaca mulatta]
gi|402893159|ref|XP_003909769.1| PREDICTED: flap endonuclease 1 isoform 1 [Papio anubis]
gi|402893161|ref|XP_003909770.1| PREDICTED: flap endonuclease 1 isoform 2 [Papio anubis]
gi|75076152|sp|Q4R5U5.1|FEN1_MACFA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|67970375|dbj|BAE01530.1| unnamed protein product [Macaca fascicularis]
gi|355566422|gb|EHH22801.1| Flap endonuclease 1 [Macaca mulatta]
gi|355752043|gb|EHH56163.1| Flap endonuclease 1 [Macaca fascicularis]
gi|380787489|gb|AFE65620.1| flap endonuclease 1 [Macaca mulatta]
gi|383413161|gb|AFH29794.1| flap endonuclease 1 [Macaca mulatta]
gi|384939550|gb|AFI33380.1| flap endonuclease 1 [Macaca mulatta]
Length = 380
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC+ LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ + +K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG
Sbjct: 185 FGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPK 244
Query: 996 NAIEVVN 1002
A++++
Sbjct: 245 RAVDLIQ 251
>gi|61680058|pdb|1UL1|X Chain X, Crystal Structure Of The Human Fen1-Pcna Complex
gi|61680059|pdb|1UL1|Y Chain Y, Crystal Structure Of The Human Fen1-Pcna Complex
gi|61680060|pdb|1UL1|Z Chain Z, Crystal Structure Of The Human Fen1-Pcna Complex
Length = 379
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC+ LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 124 KFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLT 183
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ + +K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG
Sbjct: 184 FGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPK 243
Query: 996 NAIEVVN 1002
A++++
Sbjct: 244 RAVDLIQ 250
>gi|332249905|ref|XP_003274094.1| PREDICTED: flap endonuclease 1 isoform 1 [Nomascus leucogenys]
gi|332249907|ref|XP_003274095.1| PREDICTED: flap endonuclease 1 isoform 2 [Nomascus leucogenys]
gi|441604271|ref|XP_004087863.1| PREDICTED: flap endonuclease 1 [Nomascus leucogenys]
Length = 380
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC+ LL + G+PY+ AP EAEA CA + A V T+D D FG+ + +++ +
Sbjct: 140 ECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEA 199
Query: 952 RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG A++++
Sbjct: 200 KKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|212544870|ref|XP_002152589.1| Flap endonuclease Rad27, putative [Talaromyces marneffei ATCC 18224]
gi|210065558|gb|EEA19652.1| Flap endonuclease Rad27, putative [Talaromyces marneffei ATCC 18224]
Length = 411
Score = 82.4 bits (202), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 25/240 (10%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
++ +K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D
Sbjct: 136 AEDMEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 195
Query: 934 SDVFLFGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGI 989
D F A + +++ F +++ +E + + +E LG+ + I + +LLG DY E I
Sbjct: 196 MDTLCFEAPILLRHLTFSEQRKEPILEIHLDKALE-GLGMDMAQFIDLCILLGCDYLEPI 254
Query: 990 SGIGIVNAIEVVNAFPEEDGLSKFREWIESPDP----TILGKFDVQTG----ASSRKRRS 1041
+G A++++ E L K E IE+ DP I + Q + R++
Sbjct: 255 PKVGPNTALKLIR---EHGSLEKVVEAIEN-DPKKKYVIPDDWPYQEARELFFNPDVRKA 310
Query: 1042 SDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
D D + V G+ +F + F ED+ +A ++N+K Q RLE F+
Sbjct: 311 DDPQCDFKWESPDVEGLVKFLVTDKGFSEDRVRNGAARLAKNLKTA-----QQSRLEGFF 365
>gi|45358876|ref|NP_988433.1| flap endonuclease-1 [Methanococcus maripaludis S2]
gi|45047742|emb|CAF30869.1| flap endonuclease [Methanococcus maripaludis S2]
Length = 324
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 84/156 (53%), Gaps = 7/156 (4%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + A + + ++LL++ G+PY+ AP E EAQCA + AN V++ D
Sbjct: 115 EEMQKYAKRANFLDKKTVDNSKKLLELMGIPYVNAPSEGEAQCAELVKANNAFCVISQDY 174
Query: 935 DVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIG 993
D L+GA +V KNI K +E ++ L ++R++LI A+L+G+DY G+ G G
Sbjct: 175 DSILYGAENVVKNITSSNKDIELIELEKTLSGLNISRDQLIDAAILIGTDYNPGGLKGFG 234
Query: 994 IVNAIEVV------NAFPEEDGLSKFREWIESPDPT 1023
AI+ V N E + S+ R+ + P+ T
Sbjct: 235 PKKAIDTVKKGKMENYISEIENYSEIRKIFDEPNVT 270
>gi|156937484|ref|YP_001435280.1| flap endonuclease-1 [Ignicoccus hospitalis KIN4/I]
gi|166973698|sp|A8AAC1.1|FEN_IGNH4 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|156566468|gb|ABU81873.1| flap endonuclease 1 [Ignicoccus hospitalis KIN4/I]
Length = 350
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 80/142 (56%), Gaps = 12/142 (8%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + + ++ EM E + LL+ G+P++ AP E EAQ AYM V + D
Sbjct: 119 EEARKYAQMSAKLTKEMVEEAKRLLEAMGVPWVQAPSEGEAQAAYMAAKGDVWASASQDY 178
Query: 935 DVFLFGARSVYKNI-FDDRK-------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFG+ + +N+ R+ YVE ++ + ++LG+TRE+L+ +A+L+G
Sbjct: 179 DSLLFGSPRLVRNLAVSGRRKLPNKNVYVEVKPEEITLKCVLEELGITREQLVAIAVLIG 238
Query: 983 SDYTEGISGIGIVNAIEVVNAF 1004
+DYT G+ G+G A+ V ++
Sbjct: 239 TDYTPGVKGVGPKTALRYVKSY 260
>gi|119493310|ref|XP_001263845.1| Flap endonuclease, putative [Neosartorya fischeri NRRL 181]
gi|317374917|sp|A1D8A4.1|FEN1_NEOFI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|119412005|gb|EAW21948.1| Flap endonuclease, putative [Neosartorya fischeri NRRL 181]
Length = 395
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 110/234 (47%), Gaps = 23/234 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ ++ + + LG+ R++ I + +LLG DY E I +G
Sbjct: 185 FEAPILLRHLTFSEQRKEPIQEIHLNRTLEGLGMDRKQFIDLCILLGCDYLEPIPKVGPN 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDP----TILGKFDVQTG----ASSRKRRSSDGDKD 1047
A++++ E L K E IE+ DP I + Q R + + D
Sbjct: 245 TALKLIR---EHGSLEKVVEAIEN-DPKKKYVIPEDWPYQDARELFLHPDVREADHPECD 300
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ V + EF F+ED+ +A +N+K Q RLE F+
Sbjct: 301 FKWEAPDVEALVEFLVKDKGFNEDRVRNGAARLQKNLKTA-----QQSRLEGFF 349
>gi|451853401|gb|EMD66695.1| hypothetical protein COCSADRAFT_35197 [Cochliobolus sativus ND90Pr]
Length = 395
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 122/251 (48%), Gaps = 23/251 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ+LL++ G+PYI+AP EAEAQCA + V ++D D
Sbjct: 125 KFSRRTVRVTKEHNAECQQLLKLMGIPYIVAPTEAEAQCATLAKGGKVYAAASEDMDTLT 184
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F + + +++ F +++ +E + + +E L + +++ I + +LLG DY + I GIG
Sbjct: 185 FASPILLRHLTFSEQRKEPILEIHLDKVLE-GLEMDQKQFIDLCILLGCDYLDPIKGIGP 243
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKR------RSSDGDK-D 1047
A++++ E L E I+S L D A +R +D + D
Sbjct: 244 STALKLIR---EHKDLEGVVEHIKSQSSKKLTIPDDWPFADARLLFLEPDVLPADAPECD 300
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFYTFNERF 1104
+ V G+ +F F+ED+ +A+ +NMK Q RLE F+ E+
Sbjct: 301 FKWEAPDVEGLVKFLVEEKHFNEDRVRNGAAKLQKNMKTA-----QQSRLEGFFKPIEKT 355
Query: 1105 AKIRSKRIKKA 1115
A+ ++ +KA
Sbjct: 356 AEEKATLKRKA 366
>gi|395852526|ref|XP_003798789.1| PREDICTED: flap endonuclease 1 [Otolemur garnettii]
Length = 380
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC+ LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ + +K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG
Sbjct: 185 FGSPVLMRHLTASEAKKLPIQEFHLNRILQELGLNQEQFVDLCILLGSDYCESIRGIGPK 244
Query: 996 NAIEVVN 1002
A++++
Sbjct: 245 RAVDLIQ 251
>gi|317374921|sp|B6QT52.2|FEN1_PENMQ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 116/240 (48%), Gaps = 25/240 (10%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
++ +K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D
Sbjct: 120 AEDMEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 179
Query: 934 SDVFLFGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGI 989
D F A + +++ F +++ +E + + +E LG+ + I + +LLG DY E I
Sbjct: 180 MDTLCFEAPILLRHLTFSEQRKEPILEIHLDKALE-GLGMDMAQFIDLCILLGCDYLEPI 238
Query: 990 SGIGIVNAIEVVNAFPEEDGLSKFREWIESPDP----TILGKFDVQTG----ASSRKRRS 1041
+G A++++ E L K E IE+ DP I + Q + R++
Sbjct: 239 PKVGPNTALKLIR---EHGSLEKVVEAIEN-DPKKKYVIPDDWPYQEARELFFNPDVRKA 294
Query: 1042 SDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
D D + V G+ +F + F ED+ +A ++N+K Q RLE F+
Sbjct: 295 DDPQCDFKWESPDVEGLVKFLVTDKGFSEDRVRNGAARLAKNLKTA-----QQSRLEGFF 349
>gi|4758356|ref|NP_004102.1| flap endonuclease 1 [Homo sapiens]
gi|114637922|ref|XP_001149352.1| PREDICTED: flap endonuclease 1 isoform 2 [Pan troglodytes]
gi|297688500|ref|XP_002821719.1| PREDICTED: flap endonuclease 1 isoform 1 [Pongo abelii]
gi|297688502|ref|XP_002821720.1| PREDICTED: flap endonuclease 1 isoform 2 [Pongo abelii]
gi|332836633|ref|XP_001149490.2| PREDICTED: flap endonuclease 1 isoform 4 [Pan troglodytes]
gi|397516600|ref|XP_003828512.1| PREDICTED: flap endonuclease 1 isoform 1 [Pan paniscus]
gi|397516602|ref|XP_003828513.1| PREDICTED: flap endonuclease 1 isoform 2 [Pan paniscus]
gi|410045196|ref|XP_003951955.1| PREDICTED: flap endonuclease 1 [Pan troglodytes]
gi|426368750|ref|XP_004051365.1| PREDICTED: flap endonuclease 1 isoform 1 [Gorilla gorilla gorilla]
gi|426368752|ref|XP_004051366.1| PREDICTED: flap endonuclease 1 isoform 2 [Gorilla gorilla gorilla]
gi|426368754|ref|XP_004051367.1| PREDICTED: flap endonuclease 1 isoform 3 [Gorilla gorilla gorilla]
gi|729475|sp|P39748.1|FEN1_HUMAN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=DNase
IV; AltName: Full=Flap structure-specific endonuclease 1;
AltName: Full=Maturation factor 1; Short=MF1;
Short=hFEN-1
gi|21668123|gb|AAM74238.1|AF523117_1 flap structure-specific endonuclease 1 [Homo sapiens]
gi|642090|gb|AAA91331.1| endonuclease [Homo sapiens]
gi|704377|gb|AAB32522.1| DNase IV=nuclear 42 kda 5' -> 3' exonuclease [human, HeLa cells,
Peptide, 380 aa]
gi|3169155|gb|AAC23394.1| FEN1_HUMAN [Homo sapiens]
gi|3980293|emb|CAA54166.1| flap endonuclease-1 [Homo sapiens]
gi|12653113|gb|AAH00323.1| Flap structure-specific endonuclease 1 [Homo sapiens]
gi|49168608|emb|CAG38799.1| FEN1 [Homo sapiens]
gi|54695918|gb|AAV38331.1| flap structure-specific endonuclease 1 [Homo sapiens]
gi|60813555|gb|AAX36265.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|60813577|gb|AAX36266.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61355090|gb|AAX41100.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61355958|gb|AAX41194.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61362985|gb|AAX42314.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|119594378|gb|EAW73972.1| flap structure-specific endonuclease 1 [Homo sapiens]
gi|189053461|dbj|BAG35627.1| unnamed protein product [Homo sapiens]
gi|208968397|dbj|BAG74037.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|410220904|gb|JAA07671.1| flap structure-specific endonuclease 1 [Pan troglodytes]
gi|410267972|gb|JAA21952.1| flap structure-specific endonuclease 1 [Pan troglodytes]
gi|410301536|gb|JAA29368.1| flap structure-specific endonuclease 1 [Pan troglodytes]
gi|410335329|gb|JAA36611.1| flap structure-specific endonuclease 1 [Pan troglodytes]
Length = 380
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC+ LL + G+PY+ AP EAEA CA + A V T+D D FG+ + +++ +
Sbjct: 140 ECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEA 199
Query: 952 RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG A++++
Sbjct: 200 KKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|347838761|emb|CCD53333.1| similar to flap endonuclease 1 [Botryotinia fuckeliana]
Length = 395
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYIIAP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAALARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + + +++ F +++ ++ ++ + L + R++ + + +LLG DY + I IG
Sbjct: 185 FDSPILLRHLTFSEQRKEPIQEVSLEKVLTGLNMDRKQFVDLCILLGCDYLDPIPKIGPH 244
Query: 996 NAIEVVNAFPEEDGLSKFREWI 1017
A++++ E L WI
Sbjct: 245 TALKLIR---EHGDLETLVAWI 263
>gi|16758170|ref|NP_445882.1| flap endonuclease 1 [Rattus norvegicus]
gi|8896169|gb|AAF81265.1|AF281018_1 flag structure-specific endonuclease [Rattus norvegicus]
Length = 380
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + V+ + EC+ LL + G+PY+ AP EAEA CA + A V T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDM 180
Query: 935 DVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D FG+ + +++ + +K ++ + + + ++LGL +E+ + + +LLGSDY E + G
Sbjct: 181 DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYCESVRG 240
Query: 992 IGIVNAIEVVN 1002
IG A++++
Sbjct: 241 IGPKRAVDLIQ 251
>gi|317374932|sp|B0XZ33.2|FEN1_ASPFC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ ++ + + LG+ R++ I + +LLG DY E I +G
Sbjct: 185 FEAPILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPIPKVGPN 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDP---TILGKFDVQTGASSR-----KRRSSDGDKD 1047
A++++ E L K E IE+ DP ++ ++ A R + + D
Sbjct: 245 TALKLIR---EHGSLEKVVEAIEN-DPKKKYVIPEYWPYQDARELFLHPDVREADHPECD 300
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ V + EF F+ED+ +A +N+K Q RLE F+
Sbjct: 301 FKWEAPDVEALVEFLVKDKGFNEDRVRNGAARLQKNLKTA-----QQSRLEGFF 349
>gi|385302733|gb|EIF46850.1| structure-specific endonuclease rad27 [Dekkera bruxellensis AWRI1499]
Length = 305
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 3/132 (2%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +K +R V+ E E + LL++ G+PY+ AP EAE+QCA + A V G ++D D
Sbjct: 49 ELQKFQRRTVRVTREQNEEAKHLLRLMGIPYVEAPCEAESQCAELAKAGNVYGAASEDMD 108
Query: 936 VFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +N+ + RK ++ Y ++++ K +T E+ + M +LLG DY E I G+
Sbjct: 109 TLCYQPTVLLRNVTAAESRKLKIDQYDIKEVLKGFDMTIEEFVDMCILLGCDYCETIRGV 168
Query: 993 GIVNAIEVVNAF 1004
G V A +++ +
Sbjct: 169 GPVTATKLIRKY 180
>gi|170291015|ref|YP_001737831.1| flap endonuclease-1 [Candidatus Korarchaeum cryptofilum OPF8]
gi|226700953|sp|B1L6R9.1|FEN_KORCO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|170175095|gb|ACB08148.1| XPG I domain protein [Candidatus Korarchaeum cryptofilum OPF8]
Length = 342
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 124/244 (50%), Gaps = 26/244 (10%)
Query: 803 PLVKTSGNASIYDTDIEQKSA---EERTPDTYLKDSKQNTGIFATKAIE-NVHA-EATEK 857
PL+ + G + + I ++A +E Y+ D ++ + F ++AIE V A E E
Sbjct: 47 PLMTSKGEITSVHSGIFYRTANFLKEGIIPIYVFDGEKPS--FKSRAIEERVRAREEAEL 104
Query: 858 ILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQC 917
+E ++I D E E +K + A +++ ++ +C+ +L++ G+P + AP E EAQ
Sbjct: 105 KWKEALEIGDLE------EARKYAQAALNITGDIVEDCKTILKLMGVPIVQAPSEGEAQA 158
Query: 918 AYMELANLVDGVVTDDSDVFLFGARSVYKN--IFDDRK------YV----ETYFMQDIEK 965
A+M + V + D D LFGA + +N I RK YV E ++ + K
Sbjct: 159 AHMAMKGDVWATASQDYDSLLFGAPRLIRNLTITGKRKLPGKEVYVDINPELIELESVLK 218
Query: 966 DLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTI 1024
G++RE+LI + +L+G+DY G+ GIG+ A+E+V + + L W DP
Sbjct: 219 RNGISREQLIMIGILVGTDYNLGGVKGIGVKRALELVKKYKRPEDLFSKVPWEFDVDPIS 278
Query: 1025 LGKF 1028
+ +F
Sbjct: 279 IYEF 282
>gi|57099749|ref|XP_533271.1| PREDICTED: flap endonuclease 1 isoform 1 [Canis lupus familiaris]
Length = 380
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC+ LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ + +K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG
Sbjct: 185 FGSPVLMRHLTASEAKKLPIQEFHLNRILQELGLNQEQFVDLCILLGSDYCESIRGIGPK 244
Query: 996 NAIEVVN 1002
A++++
Sbjct: 245 RAVDLIQ 251
>gi|48477300|ref|YP_023006.1| flap endonuclease-1 [Picrophilus torridus DSM 9790]
gi|73919351|sp|Q6L2I9.1|FEN_PICTO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|48429948|gb|AAT42813.1| RAD-2/FEN-1 exonuclease [Picrophilus torridus DSM 9790]
Length = 338
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 75/139 (53%), Gaps = 12/139 (8%)
Query: 878 KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVF 937
+ L ++ ++ E + LL + GLPY+ AP E EAQ +YM L V+ VV+ D D
Sbjct: 118 RSLSSRINYITDDIVNESKTLLNLMGLPYVQAPSEGEAQASYMTLKGDVNAVVSQDYDCL 177
Query: 938 LFGARSVYKN--IFDDRKYVETYFMQDIE----------KDLGLTREKLIRMALLLGSDY 985
LFGA+ + +N ++ R+ T ++ +LG++RE+LI + +L G+D+
Sbjct: 178 LFGAKRILRNFTVYGRRRIAGTSRTINVNPEIIDLNENLSNLGISREQLIYIGILTGTDF 237
Query: 986 TEGISGIGIVNAIEVVNAF 1004
G+ GIG A+ ++ +
Sbjct: 238 NPGVKGIGAKTALSLIKKY 256
>gi|61365237|gb|AAX42675.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61365242|gb|AAX42676.1| flap structure-specific endonuclease 1 [synthetic construct]
gi|61369466|gb|AAX43341.1| flap structure-specific endonuclease 1 [synthetic construct]
Length = 381
Score = 82.0 bits (201), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC+ LL + G+PY+ AP EAEA CA + A V T+D D FG+ + +++ +
Sbjct: 140 ECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEA 199
Query: 952 RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG A++++
Sbjct: 200 KKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|91085979|ref|XP_971921.1| PREDICTED: similar to flap endonuclease-1 [Tribolium castaneum]
gi|270009935|gb|EFA06383.1| hypothetical protein TcasGA2_TC009261 [Tribolium castaneum]
Length = 381
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 873 LGD--EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVV 930
LGD E K R V+ E ++LL + G+PYI AP EAEAQCA M LV
Sbjct: 117 LGDATEVDKFNRRLVKVTRHHADEAKQLLTLMGVPYIEAPCEAEAQCAAMVKGGLVYATA 176
Query: 931 TDDSDVFLFGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTE 987
T+D D FG+ + +++ F + RK V+ + + + L L ++ + + +LLG DYTE
Sbjct: 177 TEDMDALTFGSNVLLRHLTFSEARKMPVQEIHLSKVLEGLELDQKAFVDLCILLGCDYTE 236
Query: 988 GISGIGIVNAIEVVN 1002
I GIG AIE++
Sbjct: 237 SIRGIGPKRAIELIK 251
>gi|291239422|ref|XP_002739622.1| PREDICTED: flap structure-specific endonuclease 1-like [Saccoglossus
kowalevskii]
Length = 379
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K +R V+ E EC++LL G+PY+ AP EAEAQCA + A V T+D D
Sbjct: 125 KYQRRLVKVTKEHNEECKKLLTFMGIPYLDAPGEAEAQCAELVKAGKVYATATEDMDSLT 184
Query: 939 FGARSVYKNI-FDDRKYV--ETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ +V +++ F + + + + Y + +I +L L++++ I + +LLG DY + I GIG
Sbjct: 185 FGSSTVVRHMTFSEARKMPCQEYNLNNILAELELSQDEFIDLCILLGCDYCDSIRGIGPK 244
Query: 996 NAIEVV 1001
AI+++
Sbjct: 245 RAIDLI 250
>gi|431910392|gb|ELK13465.1| Flap endonuclease 1 [Pteropus alecto]
Length = 381
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC+ LL + G+PY+ AP EAEA CA + A V T+D D FG+ + +++ +
Sbjct: 140 ECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEA 199
Query: 952 RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG A++++
Sbjct: 200 KKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|311247499|ref|XP_003122675.1| PREDICTED: flap endonuclease 1-like isoform 1 [Sus scrofa]
Length = 380
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + V+ + EC+ LL + G+PY+ AP EAEA CA + A V T+D
Sbjct: 121 EEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 935 DVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D FG+ + +++ + +K ++ + + + ++LGL +E+ + + +LLGSDY E I G
Sbjct: 181 DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYCESIRG 240
Query: 992 IGIVNAIEVVN 1002
IG A++++
Sbjct: 241 IGPKRAVDLIQ 251
>gi|311247497|ref|XP_003122676.1| PREDICTED: flap endonuclease 1-like isoform 2 [Sus scrofa]
Length = 393
Score = 82.0 bits (201), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 76/131 (58%), Gaps = 3/131 (2%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + V+ + EC+ LL + G+PY+ AP EAEA CA + A V T+D
Sbjct: 134 EEVEKFTKRLVKVTKQHNDECKHLLSLMGVPYLDAPSEAEASCAALVKAGKVYAAATEDM 193
Query: 935 DVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D FG+ + +++ + +K ++ + + + ++LGL +E+ + + +LLGSDY E I G
Sbjct: 194 DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYCESIRG 253
Query: 992 IGIVNAIEVVN 1002
IG A++++
Sbjct: 254 IGPKRAVDLIQ 264
>gi|440901464|gb|ELR52399.1| Flap endonuclease 1 [Bos grunniens mutus]
Length = 380
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 98 AKRSERRAEAEKQLQEAQAAGAEAEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 157
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + I ++LG
Sbjct: 158 EAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELG 217
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 218 LNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|195123149|ref|XP_002006071.1| GI18754 [Drosophila mojavensis]
gi|317374891|sp|B4KNM1.1|FEN1_DROMO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|193911139|gb|EDW10006.1| GI18754 [Drosophila mojavensis]
Length = 388
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 112/249 (44%), Gaps = 46/249 (18%)
Query: 874 GDEQK--KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
GDE + K R V+ E E +ELL++ G+PY+ AP EAEAQCA + A V T
Sbjct: 118 GDEAEIEKFNRRLVRVTKEHSNEAKELLKLMGVPYVDAPCEAEAQCAALVKAGKVYATAT 177
Query: 932 DDSDVFLFGARSV--YKNIFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEG 988
+D D FG+ + Y + RK V+ + + + L LT ++ I + +L+G DY +
Sbjct: 178 EDMDALTFGSCKLLRYLTYSEARKMPVKEFSYDKVLQGLELTSKEFIDLCILMGCDYCDS 237
Query: 989 ISGIGIVNAIEVVNAF-----------------PEEDGLSKFREWIESPDPTILGKFDVQ 1031
I GIG AIE++ + PE + RE P+ T D++
Sbjct: 238 IKGIGPKRAIELIKTYRDIETILENIDTSKYIVPENWNYQRARELFVEPEVTDASTIDLK 297
Query: 1032 TGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDK--H 1089
A D+D G+ +F QF+E++ +K+ K
Sbjct: 298 WTAP---------DED---------GLVQFLCGDRQFNEER----VRNGARKLLKSKQSQ 335
Query: 1090 TQLRLEAFY 1098
TQ+RL++F+
Sbjct: 336 TQVRLDSFF 344
>gi|449685242|ref|XP_002159259.2| PREDICTED: flap endonuclease 1-like, partial [Hydra magnipapillata]
Length = 230
Score = 81.6 bits (200), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/166 (32%), Positives = 91/166 (54%), Gaps = 7/166 (4%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQK--KLERNAESVSSEMFAECQELLQMFGLPYIIA 909
A+ TE+ EE Q L + GD++ K R V+ + EC+ELL + G+PYI A
Sbjct: 2 AKRTER--REEAQKLLDQATEQGDQENIDKFSRRLVKVTPQHNKECKELLDLMGVPYIDA 59
Query: 910 PMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKD 966
P EAEAQCA + V + ++D D FGA + +++ + RK ++ + + ++
Sbjct: 60 PCEAEAQCAELVKGGKVYAMGSEDMDSLTFGANILLRHLTFSEARKMPIQEFHYSKVLEE 119
Query: 967 LGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSK 1012
L LT+E+ + + +LLG DY I G+G V A++++ +G+ K
Sbjct: 120 LELTKEQFVDLCILLGCDYCASIKGVGPVTAMKLIKEHRNIEGIIK 165
>gi|74219985|dbj|BAE40572.1| unnamed protein product [Mus musculus]
Length = 380
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + +E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 98 AKRSERRAEAEKQLQQAQEAGMEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 157
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+ D FG+ + +++ + +K ++ + + + ++LG
Sbjct: 158 EAEASCAALAKAGKVYAAATEGMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELG 217
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 218 LNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|75057714|sp|Q58DH8.1|FEN1_BOVIN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|61553325|gb|AAX46387.1| flap structure-specific endonuclease 1 [Bos taurus]
gi|61553832|gb|AAX46466.1| flap structure-specific endonuclease 1 [Bos taurus]
gi|61554710|gb|AAX46602.1| flap structure-specific endonuclease 1 [Bos taurus]
gi|296471658|tpg|DAA13773.1| TPA: flap endonuclease 1 [Bos taurus]
Length = 380
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 98 AKRSERRAEAEKQLQEAQAAGAEAEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 157
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + I ++LG
Sbjct: 158 EAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELG 217
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 218 LNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|396499081|ref|XP_003845386.1| similar to flap endonuclease 1 [Leptosphaeria maculans JN3]
gi|312221967|emb|CBY01907.1| similar to flap endonuclease 1 [Leptosphaeria maculans JN3]
Length = 423
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 113/234 (48%), Gaps = 23/234 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E EC+ LL++ G+P+I+AP EAEAQCA + V ++D D
Sbjct: 153 KFSRRTVRVTREHNEECRRLLKLMGIPFIVAPTEAEAQCAVLARGGKVYAAASEDMDTLT 212
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F + + +++ F +++ +E + + +E L + R + I + +LLG DY + I GIG
Sbjct: 213 FNSPILLRHLTFSEQRKEPILEIHLDKVLE-GLAMDRTQFIDLCILLGCDYLDPIKGIGP 271
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSR-------KRRSSDGDKD 1047
A++++ + +G+ K I+S L + A +R R + D + D
Sbjct: 272 STALKLIREHKDLEGVVKH---IQSQPKGKLTIPEDWPFADARLLFLEPDVRPADDPECD 328
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ V G+ +F F ED+ +A+ ++NMK Q RLE F+
Sbjct: 329 FKWEAPDVEGLVKFLVEEKHFSEDRVRNGAAKLNKNMKTA-----QQSRLEGFF 377
>gi|374628642|ref|ZP_09701027.1| flap endonuclease 1 [Methanoplanus limicola DSM 2279]
gi|373906755|gb|EHQ34859.1| flap endonuclease 1 [Methanoplanus limicola DSM 2279]
Length = 333
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 12/145 (8%)
Query: 869 EYMYLGDEQKKLE--RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
E + GD Q R++ V E+ + LL + G+PY+ AP E EAQ A+M +V
Sbjct: 108 EALKAGDNQAAFSYARSSTRVDREIIDSSKRLLSLMGIPYLDAPSEGEAQAAFMVSEGIV 167
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKY----------VETYFMQDIEKDLGLTREKLIR 976
D V+ D D LFGA + +N+ RK ET + ++ L +TRE+L+
Sbjct: 168 DYSVSQDYDSLLFGAEKLVRNLTVSRKRKIRGRTITVNPETISLDEVLSGLEITREQLVE 227
Query: 977 MALLLGSDYTEGISGIGIVNAIEVV 1001
+ +L+G+D+ GI GIG A+++V
Sbjct: 228 IGILIGTDFNSGIRGIGPKKALKIV 252
>gi|322694691|gb|EFY86514.1| exonuclease [Metarhizium acridum CQMa 102]
Length = 751
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 4/124 (3%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
+N V+ EM + + L+ G+PY++AP EA+AQ Y+E LV+G+++DDSD+ +FGA
Sbjct: 120 QNCIDVTPEMASTLIQQLKQMGIPYVVAPYEADAQLVYLERQGLVNGIISDDSDLLVFGA 179
Query: 942 RSVYKNIFDDRKYVETY---FMQDIEKDL-GLTREKLIRMALLLGSDYTEGISGIGIVNA 997
+ + + +E F E L G T RMA++ G DY +G+ G+G+ A
Sbjct: 180 KRLLTKLDQYGNCIEINRRDFCACREVSLTGWTDADFRRMAIMSGCDYLDGLPGVGLKTA 239
Query: 998 IEVV 1001
++
Sbjct: 240 YRML 243
>gi|17647423|ref|NP_523765.1| flap endonuclease 1 [Drosophila melanogaster]
gi|122102839|sp|Q7K7A9.1|FEN1_DROME RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|3929699|emb|CAA21320.1| EG:EG0003.3 [Drosophila melanogaster]
gi|7302871|gb|AAF57944.1| flap endonuclease 1 [Drosophila melanogaster]
gi|261260009|gb|ACX54939.1| MIP14376p [Drosophila melanogaster]
Length = 385
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 14/227 (6%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E E +ELL + G+PY+ AP EAEAQCA + A V T+D D
Sbjct: 125 KFNRRLVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALT 184
Query: 939 FGARSV--YKNIFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + Y + RK V+ + + + L + + I + +LLG DY E I GIG
Sbjct: 185 FGSTKLLRYLTYSEARKMPVKEFSYDKLLEGLAINNREFIDLCILLGCDYCESIKGIGPK 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSR-KRRSSDGDK-DVNYAKN 1053
AIE++N + + + + ++S T+ ++ + + +D D D+ + +
Sbjct: 245 RAIELINTYRD---IETILDNLDSSKYTVPENWNYKVARELFIEPEVADADSIDLKWVEP 301
Query: 1054 SVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDK--HTQLRLEAFY 1098
G+ +F QF+E++ KK+ K TQ+RL++F+
Sbjct: 302 DEEGLVKFLCGDRQFNEER----VRNGAKKLMKSKQAQTQVRLDSFF 344
>gi|312137188|ref|YP_004004525.1| flap endonuclease 1 [Methanothermus fervidus DSM 2088]
gi|311224907|gb|ADP77763.1| flap endonuclease 1 [Methanothermus fervidus DSM 2088]
Length = 327
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
++ +K A +S E+ +ELL G+PYI AP E EAQ Y+ V + D
Sbjct: 115 EKARKYASRASRISKEIIESSKELLDAMGIPYIQAPNEGEAQAVYLVKNGDAWAVASQDY 174
Query: 935 DVFLFGARSVYKNI-FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIG 993
D LFGA V +N+ +E + I K LG++RE+LI +ALL+G+D+ G+ GIG
Sbjct: 175 DCLLFGAPRVIRNLAISSDINLELLELDKILKKLGISREQLIDIALLVGTDFNPGVKGIG 234
Query: 994 IVNAIEVVNAF 1004
+E++ F
Sbjct: 235 AKRGLELIKKF 245
>gi|291409580|ref|XP_002721064.1| PREDICTED: flap structure-specific endonuclease 1 [Oryctolagus
cuniculus]
Length = 380
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC+ LL + G+PY+ AP EAEA CA + A V T+D D FG+ + +++ +
Sbjct: 140 ECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEA 199
Query: 952 RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG A++++
Sbjct: 200 KKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|159128014|gb|EDP53129.1| Flap endonuclease, putative [Aspergillus fumigatus A1163]
Length = 394
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 124 KFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 183
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ ++ + + LG+ R++ I + +LLG DY E I +G
Sbjct: 184 FEAPILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPIPKVGPN 243
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDP---TILGKFDVQTGASSR-----KRRSSDGDKD 1047
A++++ E L K E IE+ DP ++ ++ A R + + D
Sbjct: 244 TALKLIR---EHGSLEKVVEAIEN-DPKKKYVIPEYWPYQDARELFLHPDVREADHPECD 299
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ V + EF F+ED+ +A +N+K Q RLE F+
Sbjct: 300 FKWEAPDVEALVEFLVKDKGFNEDRVRNGAARLQKNLKTA-----QQSRLEGFF 348
>gi|351699147|gb|EHB02066.1| Flap endonuclease 1 [Heterocephalus glaber]
Length = 380
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC+ LL + G+PY+ AP EAEA CA + A V T+D D FG+ + +++ +
Sbjct: 140 ECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEA 199
Query: 952 RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
RK ++ + + I + L LT+E+ + + +LLGSDY E I GIG A++++
Sbjct: 200 RKLPIQEFHLSRILQALNLTQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|148642785|ref|YP_001273298.1| flap endonuclease-1 [Methanobrevibacter smithii ATCC 35061]
gi|166973703|sp|A5UL52.1|FEN_METS3 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|148551802|gb|ABQ86930.1| DNA repair flap structure-specific 5'-3' endonuclease
[Methanobrevibacter smithii ATCC 35061]
Length = 327
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +K + +S + ++LL M G+PYI A E EAQ AY+ V + D D
Sbjct: 116 EARKYAMRSSKLSPYIIESSKKLLTMMGIPYIEAYGEGEAQAAYLVENGDAWAVASQDYD 175
Query: 936 VFLFGARSVYKNIFDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIG 993
LFGA+ V +N+ + +E Y ++ + +L + RE+LI M +L+G+D++EG+ G+G
Sbjct: 176 CLLFGAKRVVRNLAINSNLGDLEYYNLKRVLDELDINREQLIDMGILIGTDFSEGLKGVG 235
Query: 994 IVNAIEVVNAFPEEDGLSKFRE 1015
A+++ E+ L+K +E
Sbjct: 236 AKTALKLAKKGELENKLAKLQE 257
>gi|145514642|ref|XP_001443226.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124447858|sp|A0CYG2.1|FEN12_PARTE RecName: Full=Flap endonuclease 1-2; Short=FEN-1-2; AltName:
Full=Flap structure-specific endonuclease 1-2
gi|124410604|emb|CAK75829.1| unnamed protein product [Paramecium tetraurelia]
Length = 390
Score = 81.6 bits (200), Expect = 3e-12, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 2/159 (1%)
Query: 854 ATEKILEEEMQILDHEYMYLGDEQKKLERNAES--VSSEMFAECQELLQMFGLPYIIAPM 911
A K L+EE ++ + GD Q+ L +N + +SS M + ++LQ+ G P IIAP
Sbjct: 102 ARRKKLKEEAKVKTELALEQGDMQQALLQNQRTTTISSIMKEDAIKMLQLMGCPVIIAPC 161
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTR 971
EAEAQCA + A + T+D D F + + ++ + D+ K+L LT
Sbjct: 162 EAEAQCAELCRAGKIYATATEDMDALTFRTPVLLRGFNTKKEPIYEIIYDDMIKELELTY 221
Query: 972 EKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL 1010
E+ + + +L G DYTE I GIG A +++ + +G+
Sbjct: 222 EQFVDLCILCGCDYTEKIEGIGPGTAYKLIKEYKSIEGI 260
>gi|164657682|ref|XP_001729967.1| hypothetical protein MGL_2953 [Malassezia globosa CBS 7966]
gi|159103861|gb|EDP42753.1| hypothetical protein MGL_2953 [Malassezia globosa CBS 7966]
Length = 572
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 75/129 (58%), Gaps = 18/129 (13%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
V+ M E ++L+ G+PY++AP EA+AQ AY+E L+D ++T+DSD+ +FG ++V
Sbjct: 44 VTPSMAYELIKILRAQGIPYVVAPYEADAQLAYLEQEGLIDAIITEDSDLLVFGCKTV-- 101
Query: 947 NIFDDRKYVETY-FMQDIEKDL----------GLTREKLIRMALLLGSDYTEGISGIGIV 995
+F ++TY +I++D G + + RMA+L G DY I+G+G+
Sbjct: 102 -LFK----LDTYGHCVEIQRDRFVHAKQLAFDGWSLDDFRRMAILSGCDYLPSITGMGLK 156
Query: 996 NAIEVVNAF 1004
NA + + +
Sbjct: 157 NAHKFLRKY 165
>gi|261349732|ref|ZP_05975149.1| DNA repair protein RAD2 [Methanobrevibacter smithii DSM 2374]
gi|288861687|gb|EFC93985.1| DNA repair protein RAD2 [Methanobrevibacter smithii DSM 2374]
Length = 327
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +K + +S + ++LL M G+PYI A E EAQ AY+ V + D D
Sbjct: 116 EARKYAMRSSKLSPYIIESSKKLLTMMGIPYIEAYGEGEAQAAYLVENGDAWAVASQDYD 175
Query: 936 VFLFGARSVYKNIFDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIG 993
LFGA+ V +N+ + +E Y ++ + +L + RE+LI M +L+G+D++EG+ G+G
Sbjct: 176 CLLFGAKRVVRNLAINSNLGDLEYYNLKRVLDELDINREQLIDMGILIGTDFSEGLKGVG 235
Query: 994 IVNAIEVVNAFPEEDGLSKFRE 1015
A+++ E+ L+K +E
Sbjct: 236 AKTALKLAKKGELENKLAKLQE 257
>gi|452843959|gb|EME45893.1| hypothetical protein DOTSEDRAFT_22018 [Dothistroma septosporum NZE10]
Length = 925
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 12/146 (8%)
Query: 870 YMYLGDEQKKLERNAE------SVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELA 923
+++ G + +RN + V+S ++LL+ FG P+ IAP EAEA+CA ++
Sbjct: 76 FVFDGSNKPTFKRNKKVGGPGVRVASVPEFLAKQLLKQFGFPWHIAPGEAEAECALLQRE 135
Query: 924 NLVDGVVTDDSDVFLFGARSVYKNIFDD-----RKYVETYFMQDIEKDLGLTREKLIRMA 978
+VD V+++D D +FG+ KN + +V Y Q+ ++ G+ RE +I +A
Sbjct: 136 GIVDAVLSEDVDTLMFGSGVTLKNWSSEGTSKVPTHVNVYRAQETKEKSGMDREGMILVA 195
Query: 979 LLLGSDY-TEGISGIGIVNAIEVVNA 1003
L+ G DY TEGI G G A + A
Sbjct: 196 LMSGGDYITEGIPGCGPKLACDAARA 221
>gi|379991146|ref|NP_001244014.1| flap endonuclease 1 [Equus caballus]
Length = 380
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC+ LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ + +K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG
Sbjct: 185 FGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPK 244
Query: 996 NAIEVVN 1002
A++++
Sbjct: 245 RAVDLIQ 251
>gi|62859561|ref|NP_001017005.1| flap endonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 382
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFNKRLVKVTKQHNEECKKLLTLMGVPYVDAPCEAEATCAALVKAGKVYAAATEDMDALT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K ++ + + + +D+G++ E+ + + +LLGSDY E I GIG
Sbjct: 185 FGTPVLLRHLTASEAKKLPIQEFHLNRVMQDMGVSHEQFVDLCILLGSDYCETIRGIGPK 244
Query: 996 NAIEVV 1001
AI+++
Sbjct: 245 RAIDLI 250
>gi|156553807|ref|XP_001603401.1| PREDICTED: flap endonuclease 1-like [Nasonia vitripennis]
Length = 381
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 9/129 (6%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ + E ++LL + G+P+I AP EAEAQCA M + V T+D D
Sbjct: 125 KFNRRLVKVTKQHGEEAKQLLTLMGIPFIDAPCEAEAQCAAMVKSGKVYATATEDMDALT 184
Query: 939 FGARSVYKNI-FDDRKYVETYFMQDIEKD-----LGLTREKLIRMALLLGSDYTEGISGI 992
FG + + + F + + + +Q+I+ D LGLTR++ I + ++LG DYT I G+
Sbjct: 185 FGCNVLLRRLTFSEARKMP---IQEIQYDKVLNGLGLTRDEFIDLCIMLGCDYTTSIKGV 241
Query: 993 GIVNAIEVV 1001
G AIE++
Sbjct: 242 GPKRAIELI 250
>gi|195584050|ref|XP_002081828.1| GD25512 [Drosophila simulans]
gi|317374895|sp|B4QIG6.1|FEN1_DROSI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194193837|gb|EDX07413.1| GD25512 [Drosophila simulans]
Length = 385
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E E +ELL + G+PY+ AP EAEAQCA + A V T+D D
Sbjct: 125 KFNRRLVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALT 184
Query: 939 FGARSV--YKNIFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + Y + RK V+ + + + L + + I + +LLG DY E I GIG
Sbjct: 185 FGSTKLLRYLTYSEARKMPVKEFSYDKLLEGLAINNREFIDLCILLGCDYCESIKGIGPK 244
Query: 996 NAIEVVNAF 1004
AIE++N +
Sbjct: 245 RAIELINTY 253
>gi|195335051|ref|XP_002034189.1| GM20026 [Drosophila sechellia]
gi|317374894|sp|B4HTA1.1|FEN1_DROSE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194126159|gb|EDW48202.1| GM20026 [Drosophila sechellia]
Length = 385
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E E +ELL + G+PY+ AP EAEAQCA + A V T+D D
Sbjct: 125 KFNRRLVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALT 184
Query: 939 FGARSV--YKNIFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + Y + RK V+ + + + L + + I + +LLG DY E I GIG
Sbjct: 185 FGSTKLLRYLTYSEARKMPVKEFSYDKLLEGLAINNREFIDLCILLGCDYCESIKGIGPK 244
Query: 996 NAIEVVNAF 1004
AIE++N +
Sbjct: 245 RAIELINTY 253
>gi|193659550|ref|XP_001944971.1| PREDICTED: flap endonuclease 1 [Acyrthosiphon pisum]
Length = 380
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 75/129 (58%), Gaps = 3/129 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+S EC+ELL++ G+P++ AP EAEAQCA M A V T+D D
Sbjct: 125 KFSKRLVKVTSTHTTECKELLKLMGVPFVEAPCEAEAQCAAMVKAGKVYATATEDMDALT 184
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ F + RK ++ + + + + + ++R++ I + +LLG DY I G+G
Sbjct: 185 FGSPVLLRHMTFSEARKMPIQEFQLDSVLETMEMSRDEFIDLCILLGCDYCNSIKGVGPK 244
Query: 996 NAIEVVNAF 1004
AIE++ +
Sbjct: 245 RAIELMRQY 253
>gi|317376168|sp|B1H158.1|FEN1_XENTR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|169642201|gb|AAI60482.1| flap structure specific endonuclease 1 [Xenopus (Silurana)
tropicalis]
Length = 382
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFNKRLVKVTKQHNEECKKLLTLMGVPYVDAPCEAEATCAALVKAGKVYAAATEDMDALT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K ++ + + + +D+G++ E+ + + +LLGSDY E I GIG
Sbjct: 185 FGTPVLLRHLTASEAKKLPIQEFHLNRVMQDMGVSHEQFVDLCILLGSDYCETIRGIGPK 244
Query: 996 NAIEVV 1001
AI+++
Sbjct: 245 RAIDLI 250
>gi|78042574|ref|NP_001030285.1| flap endonuclease 1 [Bos taurus]
gi|61553249|gb|AAX46374.1| flap structure-specific endonuclease 1 [Bos taurus]
Length = 380
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 98 AKRSERRAEAEKQLQEAQAAGAEAEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 157
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + I ++LG
Sbjct: 158 EAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELG 217
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 218 LNQEQFVDLCILLGSDYCESIRGIGPKRAMDLIQ 251
>gi|145349446|ref|XP_001419144.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|317374919|sp|A4S1G4.1|FEN1_OSTLU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|144579375|gb|ABO97437.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 389
Score = 81.3 bits (199), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 111/233 (47%), Gaps = 17/233 (7%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +KL + VS + E +L + G+P AP EAEA CA M A LV V T+D
Sbjct: 122 EEVEKLSKRTVRVSKQHSQEVMKLASLLGVPVFEAPCEAEASCAAMCKAGLVWAVATEDM 181
Query: 935 DVFLFGARSVYKNIFDDR---KYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D F A + +N+ + K V + + LGLT E+ I M +L G DY + I G
Sbjct: 182 DTLTFAAPRLARNLMAPKSQDKPVLEFDYDKVLAGLGLTPEQFIDMCILCGCDYCDTIRG 241
Query: 992 IGIVNAIEVVNAFPEEDGLSKFREWIES---PDPTILGKFDVQTGASSRKRRSSDGDKD- 1047
IG A++++ E + K E I++ P P +D GA + D
Sbjct: 242 IGPKTALKLIK---EHGSIEKILEEIDTEKYPPPQ---DWDF-AGARELFKNPEVMDTTG 294
Query: 1048 --VNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAFY 1098
+++ + G+ +F QF+E++ A ++ +KK K +Q RLE+F+
Sbjct: 295 IALSWKAPNEEGLIDFLVKEKQFNEERVRAVCAK-VKKARQGKASQNRLESFF 346
>gi|75775305|gb|AAI05256.1| Flap structure-specific endonuclease 1 [Bos taurus]
Length = 380
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 98 AKRSERRAEAEKQLQEAQAAGAEAEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 157
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + I ++LG
Sbjct: 158 EAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELG 217
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
L +E+ + + +LLGSDY E I GIG A++++
Sbjct: 218 LNQEQFVDLCILLGSDYCESIRGIGPKRAMDLIQ 251
>gi|317374927|sp|Q4WWJ1.2|FEN1_ASPFU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 7/147 (4%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ ++ + + LG+ R++ I + +LLG DY E I +G
Sbjct: 185 FEAPILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPIPKVGPN 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDP 1022
A++++ E L K E IE+ DP
Sbjct: 245 TALKLIR---EHGSLEKVVEAIEN-DP 267
>gi|148234716|ref|NP_001080984.1| flap endonuclease 1-B [Xenopus laevis]
gi|82071413|sp|P70054.1|FEN1B_XENLA RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B;
Short=xFEN-1b
gi|1549393|gb|AAB08478.1| XFEN1b [Xenopus laevis]
gi|213623174|gb|AAI69390.1| Flap endonuclease 1 [Xenopus laevis]
gi|213626408|gb|AAI69394.1| Flap endonuclease 1 [Xenopus laevis]
Length = 382
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFNKRLVKVTKQHNEECKKLLSLMGIPYVDAPCEAEATCAALVKAGKVYAAATEDMDALT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K ++ + + + +D+G+ E+ + + +LLGSDY E I GIG
Sbjct: 185 FGTPVLLRHLTASEAKKLPIQEFHLNRVFQDIGINHEQFVDLCILLGSDYCETIRGIGPK 244
Query: 996 NAIEVV 1001
AI+++
Sbjct: 245 RAIDLI 250
>gi|116203453|ref|XP_001227537.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88175738|gb|EAQ83206.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 378
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 113/234 (48%), Gaps = 23/234 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E ECQ LL++ G+PYI+AP EAEAQCA + A V ++D D
Sbjct: 108 KFSRRTVRVTREHNEECQRLLKLMGIPYILAPTEAEAQCAVLARAGKVYAAASEDMDTLC 167
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ F +++ ++ ++ + + L + R++ + + +LLG DY + I +G
Sbjct: 168 FNTPILLRHLTFSEQRKEPIQEIHVEKVLEGLNMERKQFVDLCILLGCDYLDPIPKVGPS 227
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDP----TILGKFDVQTG----ASSRKRRSSDGDKD 1047
A++++ E L K E++++ DP T+ + + S R++ D D
Sbjct: 228 TALKLIR---EHGSLEKVVEFMKN-DPKSRYTVPDDWPFEDARDLFFSPDVRQADDPLCD 283
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ K + G+ +F F ED+ A +N+K Q R+E F+
Sbjct: 284 FKWDKPDMEGLVKFLVQEKGFSEDRVRSGGARLEKNLK-----SSQQSRIEGFF 332
>gi|149237665|ref|XP_001524709.1| hypothetical protein LELG_03741 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451306|gb|EDK45562.1| hypothetical protein LELG_03741 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 800
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 7/146 (4%)
Query: 866 LDHEYMYLG--DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELA 923
L +Y LG D K A V+S+M L + + Y++AP EA+ Q Y+E
Sbjct: 102 LAQQYAKLGRSDLAGKQYMKAACVTSQMAKLIMCELDLLKIKYVVAPYEADPQMVYLEKI 161
Query: 924 NLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVET--YFMQDIE--KDLGLTREKLIRMAL 979
LVDG++++DSD+ +FG R + + DD VE + +++ LG E +R+A
Sbjct: 162 GLVDGILSEDSDLLIFGCRKLITKLKDDSTCVEIDRHNFKNVANMSYLGNFSESQLRLAA 221
Query: 980 LL-GSDYTEGISGIGIVNAIEVVNAF 1004
+L G DYT+G+ GIG+ +++++V +
Sbjct: 222 MLSGCDYTKGVQGIGLKSSVQLVRKY 247
>gi|393240015|gb|EJD47543.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 598
Score = 80.9 bits (198), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 21/146 (14%)
Query: 870 YMYLGDEQKKLERN--AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 927
+++ G ++ ++R + SS++ + QEL+ FG + +AP EAEA+ AY+ ++D
Sbjct: 84 FVFDGKDRPSVKRGKVVHAKSSKLQKKMQELVDAFGFQWHLAPGEAEAELAYLNTVGVID 143
Query: 928 GVVTDDSDVFLFGARSVYKN------------IF-----DDRKYVETYFMQDI--EKDLG 968
+ TDD D F+FGA ++ +N I DD K+V D+ D+
Sbjct: 144 AIWTDDVDAFIFGATTLIRNPSNTLSSNAAKPILNAAGRDDGKHVAVLTAHDLASHGDVQ 203
Query: 969 LTREKLIRMALLLGSDYTEGISGIGI 994
L+R LI +ALL G DY +G+ IG+
Sbjct: 204 LSRGGLILIALLRGGDYNKGVPQIGM 229
>gi|289192094|ref|YP_003458035.1| flap structure-specific endonuclease [Methanocaldococcus sp.
FS406-22]
gi|288938544|gb|ADC69299.1| flap structure-specific endonuclease [Methanocaldococcus sp.
FS406-22]
Length = 326
Score = 80.9 bits (198), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 1/139 (0%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E K + ++ +M C+ LL + G+PY+ AP E EAQ +YM V VV+ D
Sbjct: 115 EEAAKYAKRVSYLTPKMVENCKYLLSLMGIPYVEAPSEGEAQASYMAKKGDVWAVVSQDY 174
Query: 935 DVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIG 993
D L+G+ V +N+ ++ E + ++ +DL ++ + LI +A+ +G+DY G+ GIG
Sbjct: 175 DALLYGSPRVVRNLTTTKEMPELIELNEVLEDLRISLDDLIDIAIFMGTDYNPGGVKGIG 234
Query: 994 IVNAIEVVNAFPEEDGLSK 1012
A E+V + +D L K
Sbjct: 235 FKRAYELVRSGVAKDVLKK 253
>gi|260941263|ref|XP_002614798.1| hypothetical protein CLUG_05576 [Clavispora lusitaniae ATCC 42720]
gi|238851984|gb|EEQ41448.1| hypothetical protein CLUG_05576 [Clavispora lusitaniae ATCC 42720]
Length = 340
Score = 80.9 bits (198), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 118/237 (49%), Gaps = 20/237 (8%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E K E+ S E E ++LL++ G+PYI+AP EAEAQCA + A V ++D
Sbjct: 86 EELMKYEKRTVRASREQNDEAKKLLELMGIPYIVAPSEAEAQCAELARAGKVFAAASEDM 145
Query: 935 DVFLFGARSVYKN--IFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D + + + ++ + + RK ++ + + K L + R + + +LLG DY E I G
Sbjct: 146 DTLCYEPKYLLRHLTVAEARKMPIDQIDYEAMLKGLDMDRSTFVDLCILLGCDYCETIKG 205
Query: 992 IGIVNAIEVVNAFPEEDGLSKFREWI-ESPDPTILGKFDVQTGASSRKRRS-------SD 1043
+G V A +++ E L +WI E+P+ T K+ V + + +
Sbjct: 206 VGPVTAFKLIK---EHGSLDNIVKWIQENPEKT---KYKVPENWPYDEAKQLFMNPEITK 259
Query: 1044 GDK-DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAFYT 1099
GD+ DV + + +V G+ EF F E++ + ++ +KK + Q RL+ F+T
Sbjct: 260 GDEVDVKWNEPNVDGLVEFMVKQKGFSEERIRSG-AEKLKKA-LKGGVQGRLDGFFT 314
>gi|110766831|ref|XP_395769.3| PREDICTED: flap endonuclease 1 [Apis mellifera]
Length = 379
Score = 80.9 bits (198), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E E ++LL++ G+PYI AP EAEAQCA M A V T+D D
Sbjct: 125 KFNRRLVKVTKEHADEAKQLLKLMGIPYIDAPCEAEAQCAAMVKAGKVFATATEDMDALT 184
Query: 939 FGARSVYKNI-FDD-RKYVETYFMQD-IEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + + + F + RK F QD + + L L+ ++ I + ++LG DYT I G+G
Sbjct: 185 FGCNILLRRLTFSEARKMPVQEFHQDKVLEGLELSHDEFIDLCIMLGCDYTNSIKGVGPK 244
Query: 996 NAIEVV 1001
AIE++
Sbjct: 245 RAIELI 250
>gi|255945091|ref|XP_002563313.1| Pc20g07900 [Penicillium chrysogenum Wisconsin 54-1255]
gi|317374920|sp|B6HEM2.1|FEN1_PENCW RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|211588048|emb|CAP86119.1| Pc20g07900 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 395
Score = 80.9 bits (198), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 31/238 (13%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC++LL++ G+P+I AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECKKLLELMGIPFINAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKD-----LGLTREKLIRMALLLGSDYTEGISGIG 993
F + + +++ + E +Q+I D L + R + I + +LLG DY E I +G
Sbjct: 185 FESPILLRHLTFSEQRKEP--IQEIHLDRALEGLDMDRAQFIDLCILLGCDYLEPIPKVG 242
Query: 994 IVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDV----------QTGASSRKRRSSD 1043
A+ ++ E L K E++++ DP KF V + + R +
Sbjct: 243 ATTALSLIK---EHKSLEKVLEFMKN-DPK--KKFVVPEDWPYEDARELFTNPDVRPADH 296
Query: 1044 GDKDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ D + +V G+ EF F+ED+ +A S+++K Q RLE F+
Sbjct: 297 PECDFKWEAPNVEGLIEFLVGDKGFNEDRVRNGAARLSKHLKTA-----QQSRLEGFF 349
>gi|317419778|emb|CBN81814.1| Flap endonuclease 1-B [Dicentrarchus labrax]
Length = 380
Score = 80.9 bits (198), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 43/260 (16%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + +C++LL + G+PYI AP EAEA CA + A V T+D D
Sbjct: 125 KFSKRLVKVTKQHNDDCKKLLTLMGVPYIEAPCEAEATCAALVKAGKVFATATEDMDGLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K ++ + + +D+GLT E+ I + +LLG DY I GIG
Sbjct: 185 FGTNVLLRHLTASEAKKLPIQEFHFSRMLQDIGLTNEQFIDLCILLGCDYCATIKGIGPK 244
Query: 996 NAIEVV---------------NAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRR 1040
AI+++ N P + +W+ + K +V S+ + +
Sbjct: 245 RAIDLIRQHGCIEEILENIDPNKHPSPE------DWLYKEARRLFLKPEV-VDCSTVELK 297
Query: 1041 SSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH--TQLRLEAFY 1098
S+ D+D + +F + QF ED+ KKI + TQ RL++F+
Sbjct: 298 WSEPDED---------ALIQFMCNEKQFSEDRM----RNGCKKIMKSRQGSTQGRLDSFF 344
Query: 1099 TFNERFAKIRSKRIKKAVKG 1118
T + SKR + +KG
Sbjct: 345 TIT---GSLSSKRKEPEIKG 361
>gi|145514173|ref|XP_001442997.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124467070|sp|A0CXT3.1|FEN11_PARTE RecName: Full=Flap endonuclease 1-1; Short=FEN-1-1; AltName:
Full=Flap structure-specific endonuclease 1-1
gi|124410358|emb|CAK75600.1| unnamed protein product [Paramecium tetraurelia]
Length = 390
Score = 80.9 bits (198), Expect = 6e-12, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 2/159 (1%)
Query: 854 ATEKILEEEMQILDHEYMYLGDEQKKL--ERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A K L+EE Q+ + GD Q+ L + ++SS M + ++L++ G P IIAP
Sbjct: 102 ARRKKLKEEAQVKTELALEQGDMQQALLQHQRTTTISSVMKEDAIKMLKLMGCPVIIAPC 161
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTR 971
EAEAQCA + A + T+D D F + + ++ + D+ K+L +T
Sbjct: 162 EAEAQCAELCRAGKIYATATEDMDALTFRTPVLLRGFNTKKEPIYEIIYDDMMKELEITY 221
Query: 972 EKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL 1010
E+ + + +L G DYTE I GIG A +++ F +G+
Sbjct: 222 EQFVDLCILCGCDYTEKIEGIGPGTAYKLIKEFKSIEGI 260
>gi|223477291|ref|YP_002581507.1| Flap structure-specific endonuclease [Thermococcus sp. AM4]
gi|214032517|gb|EEB73347.1| Flap structure-specific endonuclease [Thermococcus sp. AM4]
Length = 339
Score = 80.9 bits (198), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/163 (35%), Positives = 88/163 (53%), Gaps = 17/163 (10%)
Query: 868 HEYMYLGD--EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANL 925
HE + GD E KK A ++ + + ++LL + G+P + AP E EAQ AYM
Sbjct: 106 HEALERGDIEEAKKYAMRATKLNETLIEDAKKLLGLMGVPVVQAPSEGEAQAAYMASKKK 165
Query: 926 VDGVVTDDSDVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREK 973
V + D D LFGA + +N I RK YVE ++++ K+LG+ REK
Sbjct: 166 VYASASQDYDSLLFGAPRLVRNLTITGRRKLPGKNVYVEVKPELIILEEVLKELGIDREK 225
Query: 974 LIRMALLLGSDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
LI +A+L+G+DY GI GIG A+ +V +D L+K+++
Sbjct: 226 LIELAILVGTDYNPGGIKGIGPKKALTIVKR--SKDPLAKYQK 266
>gi|71000637|ref|XP_755000.1| Flap endonuclease Rad27 [Aspergillus fumigatus Af293]
gi|66852637|gb|EAL92962.1| Flap endonuclease Rad27, putative [Aspergillus fumigatus Af293]
Length = 394
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 81/147 (55%), Gaps = 7/147 (4%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 124 KFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 183
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ ++ + + LG+ R++ I + +LLG DY E I +G
Sbjct: 184 FEAPILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPIPKVGPN 243
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDP 1022
A++++ E L K E IE+ DP
Sbjct: 244 TALKLIR---EHGSLEKVVEAIEN-DP 266
>gi|195127377|ref|XP_002008145.1| GI11983 [Drosophila mojavensis]
gi|193919754|gb|EDW18621.1| GI11983 [Drosophila mojavensis]
Length = 751
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
+ + +C+ LL G+ + P EAEA CA++ LVDGV++ DSD F +GA VY+N
Sbjct: 125 NHVLKQCENLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFAYGAVRVYRNF 184
Query: 949 --------FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIE 999
V+ Y MQ+I + + K+I MALL G DY +GI GIG ++
Sbjct: 185 SVSTQGAQAAAGGAVDIYDMQEICNHMDFGQNKVIVMALLCGCDYCPDGIGGIGKDGVLK 244
Query: 1000 VVNAFPEEDGLSKFREW 1016
+ N + E D L + R W
Sbjct: 245 LFNKYKESDILDRLRNW 261
>gi|46138549|ref|XP_390965.1| hypothetical protein FG10789.1 [Gibberella zeae PH-1]
gi|408391605|gb|EKJ70977.1| hypothetical protein FPSE_08836 [Fusarium pseudograminearum CS3096]
Length = 395
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 110/239 (46%), Gaps = 33/239 (13%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E A+CQ LL++ G+PYIIAP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNADCQRLLKLMGIPYIIAPTEAEAQCAVLAQAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ F +++ ++ + + + L + R++ + + +LLG DY + I +G
Sbjct: 185 FNTPILLRHLTFSEQRKEPIQEIRLDKVLEGLNMERKQFVDLCILLGCDYLDPIPKVGPS 244
Query: 996 NAI----------EVVNAFPEEDGLSKF---REWIESPDPTILGKFDVQTGASSRKRRSS 1042
A+ +VV A E D K+ +W + + DV R++
Sbjct: 245 TALKMIRDHGSLEKVVEAM-ENDSKKKYVIPEDWPYKDARDLFFEPDV--------RQAD 295
Query: 1043 DGDKDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
D D + K + G+ +F + F ED+ A +N+K Q RLE F+
Sbjct: 296 HPDCDFKWEKPDMEGLVKFLVTEKGFSEDRVRSGGARLEKNLK-----SSQQARLEGFF 349
>gi|355688549|gb|AER98539.1| flap structure-specific endonuclease 1 [Mustela putorius furo]
Length = 379
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC+ LL + G+PY+ AP EAEA CA + A V T+D D FG+ + +++ +
Sbjct: 140 ECKHLLSLMGVPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEA 199
Query: 952 RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+K ++ + + I ++LGL++E+ + + +LLGSDY E I GIG A+ ++
Sbjct: 200 KKLPIQEFHLSRILQELGLSQEQFVDLCILLGSDYCESIRGIGPRRAVGLIQ 251
>gi|365763272|gb|EHN04802.1| Exo1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 702
Score = 80.5 bits (197), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETY---F 959
G+ YI+AP EA++Q Y+E N+V G++++DSD+ +FG R + + D + +E F
Sbjct: 141 GIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNF 200
Query: 960 MQDIEK-DLG-LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
++ +K LG LT E++I M L G DYT GI +G++ A+++V F
Sbjct: 201 IKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITAMKLVRRF 247
>gi|317374928|sp|C4YBJ8.2|FEN1_CLAL4 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 376
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 118/237 (49%), Gaps = 20/237 (8%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E K E+ S E E ++LL++ G+PYI+AP EAEAQCA + A V ++D
Sbjct: 122 EELMKYEKRTVRASREQNDEAKKLLELMGIPYIVAPSEAEAQCAELARAGKVFAAASEDM 181
Query: 935 DVFLFGARSVYKN--IFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D + + + ++ + + RK ++ + + K L + R + + +LLG DY E I G
Sbjct: 182 DTLCYEPKYLLRHLTVAEARKMPIDQIDYEAMLKGLDMDRSTFVDLCILLGCDYCETIKG 241
Query: 992 IGIVNAIEVVNAFPEEDGLSKFREWI-ESPDPTILGKFDVQTGASSRKRRS-------SD 1043
+G V A +++ E L +WI E+P+ T K+ V + + +
Sbjct: 242 VGPVTAFKLIK---EHGSLDNIVKWIQENPEKT---KYKVPENWPYDEAKQLFMNPEITK 295
Query: 1044 GDK-DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAFYT 1099
GD+ DV + + +V G+ EF F E++ + ++ +KK + Q RL+ F+T
Sbjct: 296 GDEVDVKWNEPNVDGLVEFMVKQKGFSEERIRSG-AEKLKKA-LKGGVQGRLDGFFT 350
>gi|255732117|ref|XP_002550982.1| hypothetical protein CTRG_05280 [Candida tropicalis MYA-3404]
gi|240131268|gb|EER30828.1| hypothetical protein CTRG_05280 [Candida tropicalis MYA-3404]
Length = 678
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 5/122 (4%)
Query: 884 AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARS 943
A V+S+M L + G+ YI+AP EA+ Q Y+E LVDG++++DSD+ +FG +
Sbjct: 122 AAYVTSQMAKSIMSELDIMGIKYIVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGCKK 181
Query: 944 VYKNIFDDRKYVETYF-----MQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
+ + DD E ++ I L+ ++L +A+L G DYT+GI GIG+ A
Sbjct: 182 LITKLKDDGSCYEINRENFGKVRQIPYLNQLSNDQLRLVAMLSGCDYTKGIPGIGLTKAF 241
Query: 999 EV 1000
++
Sbjct: 242 QL 243
>gi|453084814|gb|EMF12858.1| flap endonuclease [Mycosphaerella populorum SO2202]
Length = 393
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 110/243 (45%), Gaps = 23/243 (9%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E ++ R V+ E AE Q LL++ G+PYI+AP EAEAQCA + A V ++D
Sbjct: 120 AEEVERFSRRTVRVTKEHNAEAQRLLKLMGVPYIVAPTEAEAQCAVLARAGKVYAAASED 179
Query: 934 SDVFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGIS 990
D F A + +++ F +++ ++ + + + L + I M +LLG DY + +
Sbjct: 180 MDTLTFNAPVLLRHLTFSEQRKEPIQEIHLDRVLEGLDFDLNQFIDMCILLGCDYLDPVK 239
Query: 991 GIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV-- 1048
GIG NA ++ E L K E IE GK+ + ++ R + DV
Sbjct: 240 GIGPKNAHALIK---EHKTLEKVVEHIEKT-----GKYTLPEDWPYQEARLLFQEPDVRA 291
Query: 1049 --------NYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAFYTF 1100
+ V G+ +F F ED+ + ++ K + Q RLE F+
Sbjct: 292 ADAPECDFKWEAPDVEGLVKFLVEEKGFSEDRVRSAATRLQKN--LKSGQQSRLEGFFKV 349
Query: 1101 NER 1103
E+
Sbjct: 350 KEK 352
>gi|151945661|gb|EDN63902.1| 5'-3'-exonuclease [Saccharomyces cerevisiae YJM789]
gi|190407372|gb|EDV10639.1| exonuclease [Saccharomyces cerevisiae RM11-1a]
gi|207341254|gb|EDZ69360.1| YOR033Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273419|gb|EEU08355.1| Exo1p [Saccharomyces cerevisiae JAY291]
gi|259149515|emb|CAY86319.1| Exo1p [Saccharomyces cerevisiae EC1118]
gi|323331736|gb|EGA73150.1| Exo1p [Saccharomyces cerevisiae AWRI796]
Length = 702
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETY---F 959
G+ YI+AP EA++Q Y+E N+V G++++DSD+ +FG R + + D + +E F
Sbjct: 141 GIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNF 200
Query: 960 MQDIEK-DLG-LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
++ +K LG LT E++I M L G DYT GI +G++ A+++V F
Sbjct: 201 IKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITAMKLVRRF 247
>gi|323346487|gb|EGA80774.1| Exo1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 702
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETY---F 959
G+ YI+AP EA++Q Y+E N+V G++++DSD+ +FG R + + D + +E F
Sbjct: 141 GIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNF 200
Query: 960 MQDIEK-DLG-LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
++ +K LG LT E++I M L G DYT GI +G++ A+++V F
Sbjct: 201 IKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITAMKLVRRF 247
>gi|348540973|ref|XP_003457961.1| PREDICTED: flap endonuclease 1-like [Oreochromis niloticus]
Length = 380
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 116/248 (46%), Gaps = 19/248 (7%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PYI AP EAEA CA + A V T+D D
Sbjct: 125 KFTKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDMDGLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K ++ + I +D+GLT E+ I + +LLG DY I GIG
Sbjct: 185 FGTNILLRHLTASEAKKLPIQEFHFSRILQDIGLTNEQFIDLCILLGCDYCGTIKGIGPK 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIES---PDPTILGKFDVQTGASSRKRRSSDGDKDVNYAK 1052
AI+++ + + + E I+S P P + G + ++ + +
Sbjct: 245 RAIDLIK---QHGSIEEILENIDSNKHPAPEDW-LYKEARGLFLKPEVVDCSTVELKWNE 300
Query: 1053 NSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH--TQLRLEAFYTFNERFAKIRSK 1110
G+ +F QF ED+ KKI + TQ RL++F+T + SK
Sbjct: 301 PDEEGLIQFMCEEKQFSEDR----IRNGCKKIVKSRQGSTQGRLDSFFTVT---GSLSSK 353
Query: 1111 RIKKAVKG 1118
R + +KG
Sbjct: 354 RKEPEIKG 361
>gi|330689547|pdb|3Q8K|A Chain A, Crystal Structure Of Human Flap Endonuclease Fen1 (Wt) In
Complex With Product 5'-Flap Dna, Sm3+, And K+
gi|330689551|pdb|3Q8L|A Chain A, Crystal Structure Of Human Flap Endonuclease Fen1 (Wt) In
Complex With Substrate 5'-Flap Dna, Sm3+, And K+
Length = 341
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC+ LL + G+PY+ AP EAEA CA + A V T+D D FG+ + +++ +
Sbjct: 139 ECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEA 198
Query: 952 RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG A++++
Sbjct: 199 KKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 250
>gi|323352397|gb|EGA84932.1| Exo1p [Saccharomyces cerevisiae VL3]
Length = 702
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETY---F 959
G+ YI+AP EA++Q Y+E N+V G++++DSD+ +FG R + + D + +E F
Sbjct: 141 GIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNF 200
Query: 960 MQDIEK-DLG-LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
++ +K LG LT E++I M L G DYT GI +G++ A+++V F
Sbjct: 201 IKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITAMKLVRRF 247
>gi|6324607|ref|NP_014676.1| Exo1p [Saccharomyces cerevisiae S288c]
gi|1706421|sp|P39875.2|EXO1_YEAST RecName: Full=Exodeoxyribonuclease 1; AltName:
Full=Exodeoxyribonuclease I; Short=EXO I;
Short=Exonuclease I; AltName: Full=Protein DHS1
gi|1041655|emb|CAA60749.1| ORF OR26.23 [Saccharomyces cerevisiae]
gi|1420150|emb|CAA99223.1| DHS1 [Saccharomyces cerevisiae]
gi|1840127|gb|AAB47428.1| Exo1p [Saccharomyces cerevisiae]
gi|285814922|tpg|DAA10815.1| TPA: Exo1p [Saccharomyces cerevisiae S288c]
Length = 702
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETY---F 959
G+ YI+AP EA++Q Y+E N+V G++++DSD+ +FG R + + D + +E F
Sbjct: 141 GIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNF 200
Query: 960 MQDIEK-DLG-LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
++ +K LG LT E++I M L G DYT GI +G++ A+++V F
Sbjct: 201 IKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITAMKLVRRF 247
>gi|346976080|gb|EGY19532.1| DNA-repair protein rad2 [Verticillium dahliae VdLs.17]
Length = 394
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 47/246 (19%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ+LL++ G+P+IIAP EAEAQCA + V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQKLLKLMGVPFIIAPTEAEAQCAVLAKGGKVYAAASEDMDTLT 184
Query: 939 FGARSVYKNIF--DDRK-YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ + RK ++ + + + LG+ R + + + +LLG DY + + +G
Sbjct: 185 FETPILLRHLTYSEQRKEPIQEIHLDKVMEGLGMERNQFVDLCILLGCDYLDPVPKVGPS 244
Query: 996 NAIEVVN--------------------AFPEEDGLSKFREWIESPDPTILGKFDVQTGAS 1035
A++++ PE+ + RE +PD
Sbjct: 245 TALKLIREHKTLEGVVDYIKNDPKSKYTLPEDWPFADARELFLNPD-------------- 290
Query: 1036 SRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQL 1092
R + D D + K + G+ F + F ED+ A +NMK Q
Sbjct: 291 --VRPADHADCDFKWEKPDIEGLVTFLVTEKGFSEDRVRSAGARLEKNMK-----GSQQS 343
Query: 1093 RLEAFY 1098
RL+ F+
Sbjct: 344 RLDGFF 349
>gi|349581199|dbj|GAA26357.1| K7_Exo1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296364|gb|EIW07466.1| Exo1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 702
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETY---F 959
G+ YI+AP EA++Q Y+E N+V G++++DSD+ +FG R + + D + +E F
Sbjct: 141 GIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNF 200
Query: 960 MQDIEK-DLG-LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
++ +K LG LT E++I M L G DYT GI +G++ A+++V F
Sbjct: 201 IKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITAMKLVRRF 247
>gi|323307136|gb|EGA60419.1| Exo1p [Saccharomyces cerevisiae FostersO]
Length = 702
Score = 80.5 bits (197), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETY---F 959
G+ YI+AP EA++Q Y+E N+V G++++DSD+ +FG R + + D + +E F
Sbjct: 141 GIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNF 200
Query: 960 MQDIEK-DLG-LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
++ +K LG LT E++I M L G DYT GI +G++ A+++V F
Sbjct: 201 IKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITAMKLVRRF 247
>gi|346322835|gb|EGX92433.1| DNA-repair protein rad2 [Cordyceps militaris CM01]
Length = 394
Score = 80.5 bits (197), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 47/246 (19%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL + G+P+I+AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQRLLALMGIPFIVAPTEAEAQCAVLAKAGKVFAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + + +++ F +++ ++ + + + L + R++ + + +LLG DY + I +G
Sbjct: 185 FDSPILLRHLTFSEQRKEPIQEIHLDKVLEGLNMERKQFVDLCILLGCDYLDPIPKVGPT 244
Query: 996 NAIEVVNAF--------------------PEEDGLSKFREWIESPDPTILGKFDVQTGAS 1035
A++++ + PE+ R+ SPD
Sbjct: 245 TALKLIREYGTLEKVVEAMQNDSKKKYIIPEDWPYEDARDLFFSPD-------------- 290
Query: 1036 SRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQL 1092
R + D DV + K + G+ +F F ED+ A +N+K Q
Sbjct: 291 --VRPADDPLCDVKWDKPDMDGLVKFLVGEKGFSEDRVRSGGARLEKNLK-----SSQQA 343
Query: 1093 RLEAFY 1098
RLE F+
Sbjct: 344 RLEGFF 349
>gi|224050601|ref|XP_002192880.1| PREDICTED: flap endonuclease 1 [Taeniopygia guttata]
Length = 386
Score = 80.5 bits (197), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KYSKRLVKVTPQHTQECKKLLTLMGIPYVEAPGEAEASCAALVKAGKVYAAATEDMDCLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ + +K ++ + + I +DL LT E+ + + +LLG DY I GIG
Sbjct: 185 FGSPVLMRHLTASETKKLPIQEFHLNRILQDLQLTWEQFVDLCILLGCDYCASIRGIGPK 244
Query: 996 NAIEVV 1001
A+E++
Sbjct: 245 RAVELI 250
>gi|257077017|ref|ZP_05571378.1| flap endonuclease-1 [Ferroplasma acidarmanus fer1]
Length = 339
Score = 80.5 bits (197), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 79/139 (56%), Gaps = 12/139 (8%)
Query: 878 KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVF 937
K L +++++ +E ++LL M G+P++ AP E EAQ +YM VD V++ D D
Sbjct: 118 KTLSSRINYITADIVSESKKLLDMMGVPWVQAPSEGEAQASYMSKVGAVDSVISQDYDCL 177
Query: 938 LFGARSVYKN--IFDDR------KYV----ETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
L GAR V +N ++ R K++ E +++ +LG+T+++LI + +L+G+D+
Sbjct: 178 LLGARRVLRNFTMYGRRRISGTGKFINITPEIIDLKENLDNLGITQDQLIGIGILVGTDF 237
Query: 986 TEGISGIGIVNAIEVVNAF 1004
GI GIG + ++ +
Sbjct: 238 NPGIRGIGAKTGLSLIKKY 256
>gi|384245741|gb|EIE19234.1| PIN domain-like protein [Coccomyxa subellipsoidea C-169]
Length = 384
Score = 80.5 bits (197), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 108/233 (46%), Gaps = 25/233 (10%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC+ LL++ G+P + AP EAEAQCA M LV G+ ++D D
Sbjct: 126 KYSKRTVRVTPQHNEECRRLLRLMGVPVVEAPSEAEAQCAQMCKEGLVYGIASEDMDSLT 185
Query: 939 FGARSVYKNIFDDRKY---VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +N+ + + Y + + L LT ++ + + +L G DY I GIG V
Sbjct: 186 FATPKLIRNLMKPQTQNVPINEYDYDKVLEGLNLTSDQFVDLCILCGCDYCGTIKGIGGV 245
Query: 996 NAIEVVNAFPE-EDGLSKFREW-IESPDP-------TILGKFDVQTGASSRKRRSSDGDK 1046
A++++ ED L+ E PDP + + DV G S + + + D+
Sbjct: 246 TALKLIQKHKRLEDVLASMEGGRYEIPDPFPFEEARRLFKEPDVLKGDSMPQLKWTTADE 305
Query: 1047 DVNYAKNSVGGVSEFDESISQFDEDK-QSAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ G+ +F F+ED+ + A N K K TQ RLE+F+
Sbjct: 306 E---------GLVQFLVGDKSFNEDRVRKAVQRVNAAK---SKSTQGRLESFF 346
>gi|195155221|ref|XP_002018504.1| GL16728 [Drosophila persimilis]
gi|317374892|sp|B4GIM3.1|FEN1_DROPE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194114300|gb|EDW36343.1| GL16728 [Drosophila persimilis]
Length = 386
Score = 80.5 bits (197), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 113/236 (47%), Gaps = 26/236 (11%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +K R V+ E E +ELL + G+PY+ AP EAEAQCA + A V T+D D
Sbjct: 122 EIEKFNRRLVRVTKEHAREAKELLSLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMD 181
Query: 936 VFLFGARSV--YKNIFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
FG+ + Y + RK V+ + + + L + + I + +LLG DY E I GI
Sbjct: 182 ALTFGSTKLLRYLTYSEARKMPVKEFSYDKLLEGLEVNNREFIDLCILLGCDYCESIKGI 241
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRS-------SDGD 1045
G AIE++N + + + + +++ D + K+ V + + R +D
Sbjct: 242 GPKRAIELINNYRDIETI------LDNLDTS---KYTVPENWNYKVARELFIEPEVADAS 292
Query: 1046 K-DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH--TQLRLEAFY 1098
D+ + + G+ +F QF E++ KK+ KH TQ+RL++F+
Sbjct: 293 AIDLKWTEPDEEGLVKFLCGDRQFSEER----VRNGAKKLLKSKHAQTQVRLDSFF 344
>gi|332376861|gb|AEE63570.1| unknown [Dendroctonus ponderosae]
Length = 380
Score = 80.1 bits (196), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E K R V+ E +ELL++ G+PYI AP EAEAQCA M A + T+D D
Sbjct: 122 EVDKFNRRLVKVTRHHADEAKELLRLMGVPYIEAPCEAEAQCAAMVKAGKIYATATEDMD 181
Query: 936 VFLFGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
FG+ V +++ F + RK ++ ++ + ++L L++ + I +L+G DYT+ I GI
Sbjct: 182 ALTFGSDIVLRHLTFSEARKMPIQEIHLKIVLQELNLSQTEFIDFCILMGCDYTDSIRGI 241
Query: 993 GIVNAIEVVN 1002
G +IE++
Sbjct: 242 GPKKSIELIK 251
>gi|70606571|ref|YP_255441.1| flap endonuclease-1 [Sulfolobus acidocaldarius DSM 639]
gi|449066790|ref|YP_007433872.1| flap endonuclease-1 [Sulfolobus acidocaldarius N8]
gi|449069063|ref|YP_007436144.1| flap endonuclease-1 [Sulfolobus acidocaldarius Ron12/I]
gi|68567219|gb|AAY80148.1| XPG/RAD25 related endonuclease [Sulfolobus acidocaldarius DSM 639]
gi|449035298|gb|AGE70724.1| flap endonuclease-1 [Sulfolobus acidocaldarius N8]
gi|449037571|gb|AGE72996.1| flap endonuclease-1 [Sulfolobus acidocaldarius Ron12/I]
Length = 331
Score = 80.1 bits (196), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +K + A +S+EM E ++LL G+P + AP E EA+ AY+ +L + D D
Sbjct: 98 EIRKYAQAAVRLSNEMVEESKKLLDAMGIPVVQAPGEGEAEAAYINSIDLSWAAASQDYD 157
Query: 936 VFLFGARSVYKNIFDDRK--------YVET----YFMQDIEKDLGLTREKLIRMALLLGS 983
LFGA+ + +NI K YVE ++ + K LG+ RE+LI +A+L+G+
Sbjct: 158 SLLFGAKRLVRNITISGKRKLPNKDVYVEIKPELIELESLLKKLGINREQLIDIAILIGT 217
Query: 984 DYT-EGISGIGIVNAIEVVNAF 1004
DY +G+ GIG+ A+ ++ +
Sbjct: 218 DYNPDGVKGIGVKTALRIIKKY 239
>gi|76364187|sp|Q4JAN1.2|FEN_SULAC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 349
Score = 80.1 bits (196), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 13/142 (9%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +K + A +S+EM E ++LL G+P + AP E EA+ AY+ +L + D D
Sbjct: 116 EIRKYAQAAVRLSNEMVEESKKLLDAMGIPVVQAPGEGEAEAAYINSIDLSWAAASQDYD 175
Query: 936 VFLFGARSVYKNIFDDRK--------YVET----YFMQDIEKDLGLTREKLIRMALLLGS 983
LFGA+ + +NI K YVE ++ + K LG+ RE+LI +A+L+G+
Sbjct: 176 SLLFGAKRLVRNITISGKRKLPNKDVYVEIKPELIELESLLKKLGINREQLIDIAILIGT 235
Query: 984 DYT-EGISGIGIVNAIEVVNAF 1004
DY +G+ GIG+ A+ ++ +
Sbjct: 236 DYNPDGVKGIGVKTALRIIKKY 257
>gi|195376315|ref|XP_002046942.1| GJ12207 [Drosophila virilis]
gi|194154100|gb|EDW69284.1| GJ12207 [Drosophila virilis]
Length = 747
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
+ + +C+ LL G+ + P EAEA CAY+ LVDGV++ DSD F +GA VY+N
Sbjct: 121 NHVLKQCENLLLAMGIQCVQGPGEAEAYCAYLNKHGLVDGVISQDSDCFAYGAVRVYRNF 180
Query: 949 --------FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIE 999
V+ Y MQ I + + K+I MALL G DY +GI GIG ++
Sbjct: 181 SVSTQGAQAAAGGAVDIYDMQTICAHMDFGQNKVIVMALLCGCDYCPDGIGGIGKDGVLK 240
Query: 1000 VVNAFPEEDGLSKFREW 1016
+ N + E + L + R W
Sbjct: 241 LFNKYKESEILDRLRNW 257
>gi|50556476|ref|XP_505646.1| YALI0F20042p [Yarrowia lipolytica]
gi|74632421|sp|Q6C116.1|FEN1_YARLI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|49651516|emb|CAG78455.1| YALI0F20042p [Yarrowia lipolytica CLIB122]
Length = 389
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 127/265 (47%), Gaps = 31/265 (11%)
Query: 853 EATEKILEEEMQILDHEYMYLGDEQK-------KLERNAESVSSEMFAECQELLQMFGLP 905
EA +KI E + Q+ D E G+E K + E+ V+ E E ++LL + G+P
Sbjct: 107 EALKKIEELKQQVEDGEE---GEETKEAQEDVTRFEKRTVRVTPEQNDEAKKLLTLMGIP 163
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI-FDDRKYV---ETYFMQ 961
+ AP EAEAQCA + A V ++D D FG+ + +++ F + K + E F +
Sbjct: 164 IVEAPCEAEAQCAKLAEAGKVYAAASEDMDTLCFGSPVLLRHLTFSEAKKMPISEINFAK 223
Query: 962 DIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPD 1021
+E L +T + I + +LLG DY + I G+G A++++ E L K E IE +
Sbjct: 224 ILE-GLEMTHAQFIDLCILLGCDYADTIRGVGPQTALKLMK---EHGSLEKIVEHIEK-N 278
Query: 1022 PTILGKFDVQTGASSRKRRS--------SDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ 1073
P+ GK V ++ R+ D+ + V G+ +F F ED+
Sbjct: 279 PS--GKLKVPENWPYQEVRALLQAPDVLDSSSCDIKWNNPDVEGLVDFLVRDKGFSEDRV 336
Query: 1074 SAEYSQNMKKIFMDKHTQLRLEAFY 1098
A ++ MK++ + Q RL+ F+
Sbjct: 337 RAGAARLMKQVKV--KPQARLDGFF 359
>gi|134045325|ref|YP_001096811.1| flap endonuclease-1 [Methanococcus maripaludis C5]
gi|132662950|gb|ABO34596.1| flap endonuclease 1 [Methanococcus maripaludis C5]
Length = 324
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 85/156 (54%), Gaps = 7/156 (4%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + A + + ++LL++ G+PYI AP E EAQCA + +N V++ D
Sbjct: 115 EEMQKYAKRANFLDKKTIDNSKKLLELMGIPYINAPSEGEAQCAELVKSNDAFCVISQDY 174
Query: 935 DVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIG 993
D L+GA +V KNI K +E ++ +L ++ ++LI +A+L+G+DY G+ G G
Sbjct: 175 DSILYGAENVVKNITSSNKDIELIELEKTLSELNVSLDQLIDVAILIGTDYNPGGLKGFG 234
Query: 994 IVNAIEVV------NAFPEEDGLSKFREWIESPDPT 1023
AI+ V N E + S+ R+ + P+ T
Sbjct: 235 PKKAIDTVKKGKMENYISEIENYSEIRKIFDEPNVT 270
>gi|354544656|emb|CCE41382.1| hypothetical protein CPAR2_303710 [Candida parapsilosis]
Length = 717
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 857 KILEEEMQILDHEYMYLGDEQ--KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAE 914
++L E + L +Y G Q K A V+S+M L + + Y++AP EA+
Sbjct: 93 RVLRHEAKKLAEKYAERGHLQLAYKEYMKAAYVTSQMAKSIMCELDVLKIEYVVAPYEAD 152
Query: 915 AQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVET-----YFMQDIEKDLGL 969
Q Y+E +VDG++++DSD+ +FG + + DD VE + ++ I
Sbjct: 153 PQMVYLEKIGIVDGILSEDSDLLIFGCNKLITKLKDDSSCVEINREDFHKVRQIPYLASY 212
Query: 970 TREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
T E+L +A+L G DYT+G+ G+G+ +A ++V +
Sbjct: 213 TSEQLRLVAMLSGCDYTKGVPGVGLKSAFQMVRRY 247
>gi|322708110|gb|EFY99687.1| exonuclease, putative [Metarhizium anisopliae ARSEF 23]
Length = 751
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
V+ EM + + L+ G+PY++AP EA+AQ Y+E LV+G+++DDSD+ +FGA+ +
Sbjct: 125 VTPEMASTLIQELKQMGIPYVVAPYEADAQLVYLERQGLVNGIISDDSDLLVFGAKRLLT 184
Query: 947 NIFDDRKYVETY---FMQDIEKDL-GLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+ +E F E L G T RMA++ G DY G+ G+G+ A ++
Sbjct: 185 KLDQYGNCIEINRRDFCACREVSLTGWTDADFRRMAIMSGCDYLNGLPGVGLKTAYRML 243
>gi|389740276|gb|EIM81467.1| PIN domain-like protein [Stereum hirsutum FP-91666 SS1]
Length = 528
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 77/144 (53%), Gaps = 8/144 (5%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
+ R V+ E AECQ LL++ G+P ++AP EAEAQCA + V ++D D
Sbjct: 126 RFSRRTVRVTREHNAECQRLLRLMGIPVVVAPSEAEAQCAELARGGKVYAAGSEDMDTLT 185
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F A ++++++ F + K E + +E LG+ + I + +LLG DY E I G+G
Sbjct: 186 FSAPTLFRHLTFSEAKKAPITEVTLSKALE-GLGMKMPQFIDLCILLGCDYLEPIKGVGP 244
Query: 995 VNAIEVVNAFPEEDGLSKFREWIE 1018
A++++ E GL + E ++
Sbjct: 245 KTALKLIR---EHGGLKEVLEHLK 265
>gi|195488056|ref|XP_002092153.1| GE14031 [Drosophila yakuba]
gi|317374898|sp|B4P5U9.1|FEN1_DROYA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|194178254|gb|EDW91865.1| GE14031 [Drosophila yakuba]
Length = 387
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E E +ELL + G+PY+ AP EAEAQCA + A V T+D D
Sbjct: 125 KFNRRLVRVTKEHANEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALT 184
Query: 939 FGARSV--YKNIFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + Y + RK V+ + + + + L + + I + +LLG DY E I GIG
Sbjct: 185 FGSTKLLRYLTYSEARKMPVKEFSYEKLLEGLSINSREFIDLCILLGCDYCESIKGIGPK 244
Query: 996 NAIEVVNAF 1004
AIE++N +
Sbjct: 245 RAIELINNY 253
>gi|340367941|ref|XP_003382511.1| PREDICTED: flap endonuclease 1-like [Amphimedon queenslandica]
Length = 373
Score = 80.1 bits (196), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 95/180 (52%), Gaps = 19/180 (10%)
Query: 830 TYLKDSKQNT---GIFATKAIENVHAEATEKILEEEMQILDHEYMYLGDEQK--KLERNA 884
Y+ D K T G A +A + AEA +++L+ E Q GD Q+ K ++
Sbjct: 82 VYVFDGKPPTMKSGELAKRA--DRRAEAQKELLKAEEQ---------GDIQEVEKFQKRL 130
Query: 885 ESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSV 944
V+ E +E ++LL + G+PY+ AP EAEAQCA + A V T+D D FG+ +
Sbjct: 131 VKVTPEHVSEAKKLLSLMGIPYVEAPCEAEAQCAALTKAGKVYATATEDMDALTFGSSIL 190
Query: 945 YKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+N+ + RK V + +L + + + I + +LLG DY + I GIG VNA++++
Sbjct: 191 VRNLTASEARKLPVREINLSKALTELDMDQSQFIDLCILLGCDYCDSIKGIGPVNAMKLL 250
>gi|159905743|ref|YP_001549405.1| flap endonuclease-1 [Methanococcus maripaludis C6]
gi|159887236|gb|ABX02173.1| XPG I domain protein [Methanococcus maripaludis C6]
Length = 324
Score = 80.1 bits (196), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + A + ++ ++LL++ G+PYI AP E EAQCA + AN V++ D
Sbjct: 115 EEMQKYAKRANFLDKKIIDNSKKLLELMGIPYIDAPSEGEAQCAELVKANDAFCVISQDY 174
Query: 935 DVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIG 993
D L+GA +V KNI K +E ++ +L ++ ++LI +A+L+G+DY G+ G G
Sbjct: 175 DSILYGAENVVKNITSSNKDIELIELEKTLSELNVSLDQLIDVAILIGTDYNPGGLKGFG 234
Query: 994 IVNAI------EVVNAFPEEDGLSKFREWIESPDPT 1023
AI ++V E + S+ R+ + P+ T
Sbjct: 235 PKKAIDTVKKGQMVKYISEIENYSEIRKIFDEPNVT 270
>gi|339253602|ref|XP_003372024.1| flap endonuclease 1a [Trichinella spiralis]
gi|316967624|gb|EFV52031.1| flap endonuclease 1a [Trichinella spiralis]
Length = 381
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R VS E EC+ LL++ G+PYI AP EAEAQCA + A V T+D D
Sbjct: 135 KFSRRLTKVSKEHVDECKRLLKLMGIPYIEAPCEAEAQCAALVKAKKVFAAATEDMDTLT 194
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + + + F + K ++ + D+ L +T E+ + +LLG DY I G+G
Sbjct: 195 FGSDIMLRYLTFSEAKKMPIKEFRFDDVLHGLNMTHEEFVDFCILLGCDYCPTIKGVGPK 254
Query: 996 NAIEVVNAF 1004
A +++ +
Sbjct: 255 KAYDLIKQY 263
>gi|323303082|gb|EGA56885.1| Exo1p [Saccharomyces cerevisiae FostersB]
Length = 607
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETY---F 959
G+ YI+AP EA++Q Y+E N+V G++++DSD+ +FG R + + D + +E F
Sbjct: 141 GIRYIVAPFEADSQMVYLEQKNIVQGIISEDSDLLVFGCRRLITKLNDYGECLEICRDNF 200
Query: 960 MQDIEK-DLG-LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAF 1004
++ +K LG LT E++I M L G DYT GI +G++ A+++V F
Sbjct: 201 IKLPKKFPLGSLTNEEIITMVCLSGCDYTNGIPKVGLITAMKLVRRF 247
>gi|82617225|emb|CAI64131.1| DNA repair protein [uncultured archaeon]
gi|268322957|emb|CBH36545.1| flap structure-specific endonuclease [uncultured archaeon]
Length = 330
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 860 EEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 919
E MQ + + ++ K + + + + + A+ + LL + G+PY+ AP E EAQ AY
Sbjct: 99 EAAMQKWEEAKVLFPEDAFKYAQASARIDATIVADAKTLLTLMGIPYVQAPSEGEAQAAY 158
Query: 920 MELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK--YVETYFMQDIEKDLGLTREKLIRM 977
M + V + D D LFGA +N+ RK +E ++ +E G+ RE+LI +
Sbjct: 159 MVQNGDAELVSSQDYDSLLFGAPITIRNLSAPRKKAKLELVELKALEDTQGIIREELIDI 218
Query: 978 ALLLGSDYTEGISGIGIVNAIEVVN 1002
A+L+G+D+ EGI G+G+ A++++
Sbjct: 219 AILVGTDFNEGIKGVGVKRALKLIK 243
>gi|380479712|emb|CCF42855.1| XPG domain-containing protein [Colletotrichum higginsianum]
Length = 394
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 113/251 (45%), Gaps = 47/251 (18%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R V+ E A+CQ+LL++ G+P+I+AP EAEAQCA + A V ++D
Sbjct: 120 AEEVEKFSRRTVRVTREHNADCQKLLKLMGIPFIVAPTEAEAQCAVLARAGKVYAAASED 179
Query: 934 SDVFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGIS 990
D F + +++ F +++ ++ + + + LG+ R++ + +LLG DY + I
Sbjct: 180 MDTLTFDTPILLRHLTFSEQRKEPIQEVHIDKVLEGLGMERKQFVDFCILLGCDYLDPIP 239
Query: 991 GIGIVNAIE----------VVNAF----------PEEDGLSKFREWIESPDPTILGKFDV 1030
+G A++ +V AF PE+ RE +PD
Sbjct: 240 KVGPSTALKLIREHGDLETLVEAFKNDPKQKYVIPEDWPYQDARELFLNPD--------- 290
Query: 1031 QTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMD 1087
R + D D + K + G+ ++ + F ED+ A +N+K
Sbjct: 291 -------VRPADDPLCDFKWEKPDMEGLVQYLVTEKGFSEDRVRGAGARLEKNLK----- 338
Query: 1088 KHTQLRLEAFY 1098
Q+RL+ F+
Sbjct: 339 SSQQVRLDGFF 349
>gi|71018115|ref|XP_759288.1| hypothetical protein UM03141.1 [Ustilago maydis 521]
gi|46099138|gb|EAK84371.1| hypothetical protein UM03141.1 [Ustilago maydis 521]
Length = 828
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ EM + ++L+ +PY++AP EA+AQ AY+E ++DGVVT+DSD+ +FG ++V
Sbjct: 125 ITPEMAFQLIKVLKEDNIPYVVAPYEADAQLAYLEAEGIIDGVVTEDSDLLVFGCKTVLF 184
Query: 947 NIFDDRKYVETY---FMQDIEKDL-GLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+ VE F + + L G T + +MA+L G DY I G+G+ NA ++
Sbjct: 185 KLDQAGNAVEMLQHRFWTNRQVALSGWTAVEFRQMAILSGCDYLPSIVGMGLKNAHRLLR 244
Query: 1003 AF 1004
+
Sbjct: 245 RY 246
>gi|327306185|ref|XP_003237784.1| flap endonuclease [Trichophyton rubrum CBS 118892]
gi|326460782|gb|EGD86235.1| flap endonuclease [Trichophyton rubrum CBS 118892]
Length = 447
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 113/237 (47%), Gaps = 29/237 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC+ LL++ G+PY+ AP EAEAQCA + A V G ++D D
Sbjct: 177 KFSRRTVRVTKEHNAECKRLLELMGIPYLDAPTEAEAQCAVLARAGKVFGAASEDMDTLC 236
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F A + +++ F +++ +E + + + + LG+ + + + +LLG DY + I +G
Sbjct: 237 FAAPVLLRHLTFSEQRKEPILEIH-LDKVLEGLGMDMTQFVDLCILLGCDYLDPIPKVGP 295
Query: 995 VNAIEVVNAFPEEDGLSKFREWIES--------PD--PTILGKFDVQTGASSRKRRSSDG 1044
A++++ + L K E IES PD P + + + + R +
Sbjct: 296 NTALKMIR---DHGTLEKVVEAIESDPKKKYVIPDDWPYLQAR---ELFFNPDVRPADAP 349
Query: 1045 DKDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ D ++ V G+ F F ED+ +A ++N+K Q RLE F+
Sbjct: 350 ECDFKWSAPDVEGLVRFLVEEKGFSEDRVRNGAARLTKNLKSA-----QQSRLEGFF 401
>gi|241627391|ref|XP_002409855.1| endonuclease, putative [Ixodes scapularis]
gi|215503262|gb|EEC12756.1| endonuclease, putative [Ixodes scapularis]
Length = 384
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + +C+ LL + G+PYI AP EAEAQCA + V G T+D D
Sbjct: 123 KFSKRLVKVTRQHGEDCKRLLGLMGVPYIEAPCEAEAQCAELVKGGKVYGTATEDMDGLT 182
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + RK ++ + ++ + L L R++ I + +LLG DY E I GIG
Sbjct: 183 FGTNVLLRHMTYSEARKMPIKEFNLERVLSGLELNRDEFIDLCILLGCDYCESIRGIGPK 242
Query: 996 NAIEVV 1001
AIE++
Sbjct: 243 RAIELI 248
>gi|212224248|ref|YP_002307484.1| flap endonuclease-1 [Thermococcus onnurineus NA1]
gi|226700956|sp|B6YWX4.1|FEN_THEON RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|212009205|gb|ACJ16587.1| flap structure-specific endonuclease [Thermococcus onnurineus NA1]
Length = 341
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 15/154 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E KK A V+ + + + LL++ G+P I AP E EAQ AYM V + D
Sbjct: 115 EEAKKYAMRATRVNEGLINDAKTLLELMGIPVIQAPSEGEAQAAYMAAKKKVYASASQDY 174
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA + +N I RK YVE ++++ K+L + REKLI MA+L+G
Sbjct: 175 DSLLFGAPKLVRNLTITGRRKLPGKNVYVEVKPELIVLEEVLKELSIDREKLIEMAILVG 234
Query: 983 SDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
+DY GI GIG A+ +V +D L K+++
Sbjct: 235 TDYNPGGIKGIGPKKALTIVKR--TKDPLKKYQK 266
>gi|358340619|dbj|GAA29362.2| flap endonuclease GEN homolog 1 [Clonorchis sinensis]
Length = 612
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 7/137 (5%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
S++ EC+ LLQ G+P + +P EAEA CA + + VD +T+D D FL+GA +VY++
Sbjct: 113 SKISGECRTLLQALGVPCVQSPGEAEAMCALLNSSKRVDACITNDGDAFLYGATTVYRHF 172
Query: 949 FDDRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDY----TEGISGIGIVNAIEVVN 1002
+ + V Y I K+L L R L+ ++++LG DY T GI GI + +
Sbjct: 173 TMNSRDPSVYVYRSSRIYKELSLDRFLLVFLSIVLGCDYWPTGTVGIGQAGIQRLVSSLR 232
Query: 1003 AFPEEDGLSKFREWIES 1019
E L WI++
Sbjct: 233 CLTSEK-LRDLLNWIKT 248
>gi|348560389|ref|XP_003465996.1| PREDICTED: flap endonuclease 1-like [Cavia porcellus]
Length = 380
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 85/154 (55%), Gaps = 3/154 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ +E+ E E Q+ + + +E +K + V+ + EC+ LL + G+PY+ AP
Sbjct: 98 AKRSERRAEAEKQLQQAQAVGAEEEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPS 157
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLG 968
EAEA CA + A V T+D D FG+ + +++ + +K ++ + + + + L
Sbjct: 158 EAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQALD 217
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
LT+ + + + +LLGSDY E I GIG A++++
Sbjct: 218 LTQAQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 251
>gi|194882401|ref|XP_001975300.1| GG22240 [Drosophila erecta]
gi|317374889|sp|B3NP61.1|FEN1_DROER RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190658487|gb|EDV55700.1| GG22240 [Drosophila erecta]
Length = 387
Score = 79.7 bits (195), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 3/129 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E E +ELL + G+PY+ AP EAEAQCA + A V T+D D
Sbjct: 125 KFNRRLVRVTKEHAKEAKELLTLMGVPYVDAPCEAEAQCAALVKAGKVYATATEDMDALT 184
Query: 939 FGARSV--YKNIFDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + Y + RK V+ + + + L + + I + +LLG DY E I GIG
Sbjct: 185 FGSTKLLRYLTYSEARKMPVKEFSYDKLLEGLSINSREFIDLCILLGCDYCESIKGIGPK 244
Query: 996 NAIEVVNAF 1004
AIE++N +
Sbjct: 245 RAIELINNY 253
>gi|82187497|sp|Q6TNU4.1|FEN1A_DANRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|37362214|gb|AAQ91235.1| flap structure-specific endonuclease 1 [Danio rerio]
gi|47940409|gb|AAH71488.1| Fen1 protein [Danio rerio]
Length = 380
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 29/253 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PYI AP EAEA CA + A V T+D D
Sbjct: 125 KFSKRLVKVTKQHNEECKKLLSLMGVPYIEAPCEAEASCAALVKAGKVYATATEDMDGLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K ++ + I +D+ LT ++ I + +LLG DY I GIG
Sbjct: 185 FGTTVLLRHLTASEAKKLPIQEFHFSRILQDMELTHQQFIDLCILLGCDYCGTIKGIGPK 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRS-------SDGDK-D 1047
AI+++ E +E+ DP K ++ R DG D
Sbjct: 245 RAIDLIKQH------GSIEEILENIDPN---KHPAPEDWLYKEARGLFLEPEVVDGTSVD 295
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH--TQLRLEAFYTFNERFA 1105
+ + + G+ +F + QF ED+ KKI + TQ RL+ F+T
Sbjct: 296 LKWNEPDEDGLIQFMCAEKQFSEDR----IRNGCKKITKSRQGSTQGRLDTFFTVT---G 348
Query: 1106 KIRSKRIKKAVKG 1118
I SKR + KG
Sbjct: 349 SISSKRKEPETKG 361
>gi|344301703|gb|EGW32008.1| hypothetical protein SPAPADRAFT_50611 [Spathaspora passalidarum NRRL
Y-27907]
Length = 638
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 871 MYLGDEQKKLE----RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
MY+ + KL A SV+ M L G+ Y++AP EA+ Q Y+E +V
Sbjct: 105 MYMKQGKTKLAFKEFMKAASVTHAMAKSIMVELDNLGIKYVVAPYEADPQMVYLEKIGVV 164
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRKYVETY---F--MQDIEKDLGLTREKLIRMALLL 981
DG++++DSD+ +FG + + + DD VE F ++ I T E+L +A+L
Sbjct: 165 DGILSEDSDLLVFGCKRLITKLKDDGSCVEINRDDFGKVRSIPYLSSYTPEQLRLVAMLS 224
Query: 982 GSDYTEGISGIGIVNAIEVVNAF 1004
G DYT+G++GIGI +A +V +
Sbjct: 225 GCDYTKGVNGIGIKSAFTLVRKY 247
>gi|358054307|dbj|GAA99233.1| hypothetical protein E5Q_05927 [Mixia osmundae IAM 14324]
Length = 389
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E KL R V+ E ECQ LL++ G+P+IIAP EAEAQCA + LV G ++D
Sbjct: 122 EEIDKLSRRTVRVTKEHNEECQRLLKLMGIPFIIAPSEAEAQCAELCRGGLVYGTGSEDM 181
Query: 935 DVFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D F + + +++ F +++ ++ + ++ K + LT ++ I M +L G DY + +
Sbjct: 182 DTLTFSSPIILRHLTFSEQRKLPIDVIELSEVLKGMELTMDEFIDMCILSGCDYVDPLPK 241
Query: 992 IGIVNAIEVVN 1002
IG A++++
Sbjct: 242 IGAKTALKLIK 252
>gi|254585117|ref|XP_002498126.1| ZYRO0G02860p [Zygosaccharomyces rouxii]
gi|317376173|sp|C5DZA9.1|FEN1_ZYGRC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|238941020|emb|CAR29193.1| ZYRO0G02860p [Zygosaccharomyces rouxii]
Length = 379
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER VS E E + LL++ G+PYI+AP EAEAQCA + V ++D D
Sbjct: 120 EKLKQERRLVKVSPEHNDEAKYLLKLMGIPYIVAPCEAEAQCAQLAKDGKVYAAASEDMD 179
Query: 936 VFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ F + K + + + + L LT+E+ + + ++LG DY E I GI
Sbjct: 180 TLCYKTPYLLRHLTFSEAKKEPIHEIDTELVLQGLELTQEQFVDLGIMLGCDYCESIRGI 239
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIES 1019
G V A++++ E L K E+IES
Sbjct: 240 GPVTALKLIK---EHGSLEKIVEFIES 263
>gi|402468038|gb|EJW03248.1| hypothetical protein EDEG_00228 [Edhazardia aedis USNM 41457]
Length = 362
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 111/210 (52%), Gaps = 25/210 (11%)
Query: 874 GDEQK--KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
GD+++ K ++ V+ + +C++LL + +PY++AP EAEA AY+ + +VD V T
Sbjct: 119 GDKEQIEKFDKRKVKVTKKHVDDCKKLLDLMKVPYVVAPSEAEAYAAYLCIKGVVDAVAT 178
Query: 932 DDSDVFLFGARSVYKNI--FDDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEG 988
+D D FGA + +N+ +++K + Y +++I K+L + + I + ++LG DY +
Sbjct: 179 EDMDALTFGAPILLRNLNAAENKKLPIVEYNLKEILKELKINHNQFIDVCIMLGCDYVKP 238
Query: 989 ISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV 1048
+ G G A E++ +D IE TIL K +++ S++ SS+ D
Sbjct: 239 LRGFGPKRAYEMI--LKHKD--------IE----TILEKEKIKSLESTKNENSSEADDIW 284
Query: 1049 NYAK-----NSVGGVS-EFDESISQFDEDK 1072
N+ + N + VS E E + + D DK
Sbjct: 285 NFEEARIIFNELPHVSDEIIEKMPEIDFDK 314
>gi|387916082|gb|AFK11650.1| Flap endonuclease 1-B [Callorhinchus milii]
Length = 382
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC+ LL + G+PY+ AP EAEA CA + + V G T+D D FG + + + +
Sbjct: 140 ECKTLLTLMGIPYLEAPCEAEASCAALVKSGKVYGTATEDMDGLAFGTTILLRRMTASEA 199
Query: 952 RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+K ++ + + I ++ GL++E+ I + +LLG DY E I GIG AIE++
Sbjct: 200 KKLPIQEFHLNKILQETGLSQEEFIDLCILLGCDYCETIRGIGPKRAIELI 250
>gi|328852744|gb|EGG01887.1| hypothetical protein MELLADRAFT_110505 [Melampsora larici-populina
98AG31]
Length = 385
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 106/241 (43%), Gaps = 41/241 (17%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
KL R V+ E EC+ LL + G+P++IAP EAEAQCA + LV G ++D D
Sbjct: 126 KLTRRTVKVTREHNEECRRLLTLMGIPWVIAPSEAEAQCAELCKGGLVYGAGSEDMDTLT 185
Query: 939 FGARSVYKNI-FDDRKYV--ETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ F + + V T + + L LT E+ I +L G DY + + G+
Sbjct: 186 FGTPLLLRHLTFSEARKVPINTVNLSKVLAGLDLTMERFIDFCILCGCDYVDPLKGVAAK 245
Query: 996 NAIEVV------------------NAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSR 1037
A++++ N PE+ ++ +E PD ++ D++
Sbjct: 246 TALKLIKEHGSLEAVVDHLQQTGKNPPPEDWPWAEAKELFVKPD--VIKSEDIK------ 297
Query: 1038 KRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAF 1097
+ + V G+ EF FDE++ N K+ M + Q RL+ F
Sbjct: 298 ----------LEWNMPDVDGLVEFLVKEKGFDEER--VRKGTNKLKLAMTQKQQGRLDGF 345
Query: 1098 Y 1098
+
Sbjct: 346 F 346
>gi|367008554|ref|XP_003678778.1| hypothetical protein TDEL_0A02350 [Torulaspora delbrueckii]
gi|359746435|emb|CCE89567.1| hypothetical protein TDEL_0A02350 [Torulaspora delbrueckii]
Length = 380
Score = 79.3 bits (194), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER VS E E ++LL++ G+PY+ AP EAEAQCA + V ++D D
Sbjct: 120 EKMKQERRLVRVSKEHNDEAKQLLELMGVPYLTAPTEAEAQCAELAKKGKVYAAASEDMD 179
Query: 936 VFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ F + K + + + LGLT E+ + + ++LG DY E I G+
Sbjct: 180 TLCYRTPYLLRHLTFSEAKKEPIHEIDTETVLNGLGLTIEQFVDLGIMLGCDYCESIRGV 239
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIES 1019
G V A++++ E L K E++ES
Sbjct: 240 GPVTALKLIK---EHGSLEKIIEFVES 263
>gi|357601961|gb|EHJ63212.1| flap endonuclease-1 [Danaus plexippus]
Length = 266
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 71/126 (56%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ + AE ++LL++ G+P + AP EAEAQCA + V V T+D D
Sbjct: 13 KFNRRLVKVTQQHGAEARQLLKLMGIPVVEAPCEAEAQCAELVKGGKVYAVATEDMDALT 72
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FGA + +++ F + RK V+ + + + + L L + + I + +LLG DY I GIG
Sbjct: 73 FGANVLLRHLTFSEARKMPVQEFHLDQVLRGLELEQTEFIDLCILLGCDYCGSIKGIGPK 132
Query: 996 NAIEVV 1001
AIE++
Sbjct: 133 RAIELI 138
>gi|353240941|emb|CCA72785.1| related to EXO1-exonuclease which interacts with Msh2p
[Piriformospora indica DSM 11827]
Length = 827
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 84/158 (53%), Gaps = 18/158 (11%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQEL-----------LQMFGLPYIIAPMEAEAQCAYME 921
L ++ R S + +++A C ++ L+ + Y++AP EA+AQ AY+E
Sbjct: 100 LAKAKQLASRGRHSEARDLYARCVDISPKHAFQLIKALRAESVAYVVAPYEADAQLAYLE 159
Query: 922 LANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETY-----FMQDIEKDLGLTREKLIR 976
+ +V G++T+DSD+ +FG ++VY + D Y + F Q + +L L + R
Sbjct: 160 RSGIVQGILTEDSDLLVFGCQNVYFKL-DTSTYTVAHIARAKFSQVTDINLALWTDTEFR 218
Query: 977 -MALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKF 1013
MA++ G DY EG+ GIG+ A +++ + + + KF
Sbjct: 219 HMAMMSGCDYLEGLKGIGVRTANKLLRKYKSLERVLKF 256
>gi|328351252|emb|CCA37652.1| Exonuclease 1 [Komagataella pastoris CBS 7435]
Length = 657
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 18/155 (11%)
Query: 863 MQILDHEYMY--LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM 920
M +DH+ Y + ++ ++LER+ + +E+ + ++LL + + Y+I+P E EAQCAY+
Sbjct: 110 MGKVDHDQYYKNVMEQIRELERDKWDLPAEV-VQLRKLLDNWNISYLISPGEGEAQCAYL 168
Query: 921 ELANLVDGVVTDDSDVFLFGARSVYKN---------------IFDDRKYVETYFMQDIEK 965
+ LVD +VT+D D +FG V +N I +D YV M +
Sbjct: 169 QTQGLVDCIVTNDVDTLIFGGTLVLRNFSKNFQDKPASNTRDIPEDEFYVTPISMDKVTH 228
Query: 966 DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEV 1000
GL +L+ +A L G DY G++ IGI +I +
Sbjct: 229 ATGLDTGRLLFVASLRGGDYNHGVNDIGIKRSIHL 263
>gi|296411549|ref|XP_002835493.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629277|emb|CAZ79650.1| unnamed protein product [Tuber melanosporum]
Length = 481
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R V+ E+ EC+ LL G+PY+ AP EAEAQCA + A V +DD
Sbjct: 215 AEEVEKFSRRTVRVTKEINDECKRLLTCMGIPYVEAPCEAEAQCAALAKAGKVYAAASDD 274
Query: 934 SDVFLFGARSVYKNIF---DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGIS 990
D F + K + ++ V+ ++ ++LG TR++ I + +LLG DY + I
Sbjct: 275 MDTLCFETPILLKKLMLSEMKKEPVQEIYLDRAMQELGFTRDQFIDLCILLGCDYCDTIP 334
Query: 991 GIGIVNAIEVV 1001
+G A++++
Sbjct: 335 KVGPTTALKLI 345
>gi|410909029|ref|XP_003967993.1| PREDICTED: flap endonuclease 1-like [Takifugu rubripes]
Length = 380
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 44/243 (18%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PYI AP EAEA CA + A V T+D D
Sbjct: 125 KFSKRLVKVTKQHSDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDMDGLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K ++ + + ++ GLT E+ I + +LLG DY I GIG
Sbjct: 185 FGTNVLLRHLTASEAKKLPIQEFHFSRVLQETGLTNEQFIDLCILLGCDYCGTIKGIGPK 244
Query: 996 NAIEVV---------------NAFPE-EDGLSK-FREWIESPDPTILGKFDVQTGASSRK 1038
AI+++ N +P ED L K R +PD +++ G
Sbjct: 245 RAIDLIKQHGSIEEILENIDTNKYPSPEDWLFKEARGLFVNPDVVDCSTVELKWG----- 299
Query: 1039 RRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH--TQLRLEA 1096
+ D+D G+ +F + QF ED+ KKI + TQ RL++
Sbjct: 300 ----EPDED---------GLIQFMCNEKQFSEDR----IRNGCKKIVKSRQGSTQGRLDS 342
Query: 1097 FYT 1099
F+T
Sbjct: 343 FFT 345
>gi|295663294|ref|XP_002792200.1| DNA-repair protein rad2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279375|gb|EEH34941.1| DNA-repair protein rad2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 381
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 113/237 (47%), Gaps = 29/237 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 111 KFSRRTVRVTREHNEECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 170
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F + + +++ F +++ +E + + +E DL + R++ + + +LLG DY + I IG
Sbjct: 171 FDSPILLRHLTFSEQRKEPILEIHLDRVLE-DLDMDRKQFVDLCILLGCDYLDPIPKIGP 229
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK----------RRSSDG 1044
A++++ + L K E IES DP K+ + + R++
Sbjct: 230 NTALKLIR---DHGSLEKVVEAIES-DPK--KKYVIPEDWPYKDARELFFDPDVRKADHP 283
Query: 1045 DKDVNYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEAFY 1098
D D + V G+ +F F ED+ +A +N+K Q RLE F+
Sbjct: 284 DCDFKWEAPDVEGLVKFLVEEKAFSEDRVRNAAARLQKNLK-----TAQQSRLEGFF 335
>gi|118596594|dbj|BAF37956.1| putative flap endonuclease-1 [Sulfolobus sp. G81]
Length = 304
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 13/142 (9%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E KK + + +S+EM E +ELL+ G+P + AP E EA+ AY+ + L + D D
Sbjct: 71 ELKKYAQMSIKLSNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYD 130
Query: 936 VFLFGARSVYKNIFDDRK--------YVET----YFMQDIEKDLGLTREKLIRMALLLGS 983
LFGA+ + +N+ K YVE + + K LGLTRE+LI + +++G+
Sbjct: 131 SLLFGAKRLVRNLTLSGKRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGT 190
Query: 984 DYT-EGISGIGIVNAIEVVNAF 1004
DY +GI G G+ A ++ +
Sbjct: 191 DYNPDGIKGYGVKTAYRIIKKY 212
>gi|154292277|ref|XP_001546714.1| hypothetical protein BC1G_14593 [Botryotinia fuckeliana B05.10]
Length = 302
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 6/144 (4%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+PYIIAP EAEAQCA + A V ++D D
Sbjct: 137 KFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAALARAGKVYAAASEDMDTLC 196
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + + +++ F +++ ++ ++ + L + R++ + + +LLG DY + I IG
Sbjct: 197 FDSPILLRHLTFSEQRKEPIQEVSLEKVLTGLNMDRKQFVDLCILLGCDYLDPIPKIGPH 256
Query: 996 NAIEVVNAFPEEDGLSKFREWIES 1019
A++++ E L WI +
Sbjct: 257 TALKLIR---EHGDLETLVAWITA 277
>gi|118596628|dbj|BAF37974.1| flap endonuclease-1 [Thermoplasma sp. P61]
Length = 328
Score = 79.3 bits (194), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 13/127 (10%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ ++ + ++LL G+PYI AP E EAQ +YM N VDGV++ D D LFGAR + +
Sbjct: 126 ITPQIVDDTKKLLDYMGIPYIDAPSEGEAQASYMTKKN-VDGVISQDYDCLLFGARKILR 184
Query: 947 N--IFDDRK----------YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
N I+ RK Y E + ++ + +++LI + +L+G+D+ EGI GIG
Sbjct: 185 NFAIYGRRKVPRKNIYKTVYPEYIILDEVLSANQINQDQLIGIGILVGTDFNEGIKGIGA 244
Query: 995 VNAIEVV 1001
A+ ++
Sbjct: 245 KKALALI 251
>gi|118596596|dbj|BAF37957.1| flap endonuclease-1 [Thermoplasma sp. S01]
Length = 336
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 13/127 (10%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ ++ + ++LL G+PY+ AP E EAQ +YM N VDGV++ D D LFGAR V +
Sbjct: 126 ITPQIVNDTKKLLDYMGIPYVDAPSEGEAQASYMTRKN-VDGVISQDYDCLLFGARKVLR 184
Query: 947 N--IFDDRK----------YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
N I+ RK Y E + ++ + +++LI + +L+G+D+ EGI GIG
Sbjct: 185 NFAIYGRRKVPRKNIYKTVYPEYIILDEVLSANQINQDQLIGIGILVGTDFNEGIKGIGA 244
Query: 995 VNAIEVV 1001
A+ ++
Sbjct: 245 KKALALI 251
>gi|425778472|gb|EKV16597.1| Flap endonuclease 1 [Penicillium digitatum PHI26]
gi|425784232|gb|EKV22023.1| Flap endonuclease 1 [Penicillium digitatum Pd1]
Length = 395
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 112/238 (47%), Gaps = 31/238 (13%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC++LL + G+P+I AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECKKLLGLMGIPFINAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKD-----LGLTREKLIRMALLLGSDYTEGISGIG 993
F + + +++ + E +Q+I D L + R + I + +LLG DY E I +G
Sbjct: 185 FESPILLRHLTFSEQRKEP--IQEIHLDRALEGLDMDRPQFIDLCILLGCDYLEPIPKVG 242
Query: 994 IVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDV----------QTGASSRKRRSSD 1043
A+ ++ E L K E++++ DP KF V + ++ R +
Sbjct: 243 ATTALSLIK---EHKSLEKVLEFMKN-DPK--KKFVVPEDWPYEDARELFSNPDVRPADH 296
Query: 1044 GDKDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ D + +V G+ E+ F+ED+ +A S+++K Q RLE F+
Sbjct: 297 AECDFKWEAPNVEGLIEYLVGDKGFNEDRVRNGAARLSKHLKTA-----QQSRLEGFF 349
>gi|388583596|gb|EIM23897.1| PIN domain-like protein [Wallemia sebi CBS 633.66]
Length = 433
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
+L R V+ E EC++LL++ G+P + AP EAEAQCA + V ++D D
Sbjct: 126 RLSRRTVRVTKEHNMECRKLLRLMGIPVVEAPSEAEAQCAELVRGGKVWAAGSEDMDTLT 185
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FGA + +++ F ++K + Y++++ L + RE+ + +LLG DY E + G+G
Sbjct: 186 FGAPILLRHLTFSEQKKEPISHYYLEEALTGLEMGREQFTDLCILLGCDYLEPVKGVGPS 245
Query: 996 NAIEVVNAF 1004
A++++ +
Sbjct: 246 TALKLIREY 254
>gi|383859686|ref|XP_003705323.1| PREDICTED: flap endonuclease 1-like [Megachile rotundata]
Length = 383
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 112/236 (47%), Gaps = 32/236 (13%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E ++LL++ G+PY+ AP EAEAQCA + A V T+D D
Sbjct: 125 KFNRRLVKVTQVHADEAKQLLKLMGIPYVEAPCEAEAQCAALVKAGKVFATATEDMDALT 184
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + + + F + RK V+ + + + LGL +++ I + ++LG DYT I G+G
Sbjct: 185 FGCNVLLRRLTFSEARKMPVQEFHHDKVLEGLGLNQDEFIDLCIMLGCDYTNSIKGVGPK 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNSV 1055
A+E++ L K E +++ K+ V + ++ R + + + V
Sbjct: 245 RAMELIKT---HRSLEKILENLDT------NKYPVPEDWNYKQAR-------LLFQEPEV 288
Query: 1056 GGVSEFDESISQFDE---------DKQSAE--YSQNMKKIFMDKH--TQLRLEAFY 1098
V E + S+ DE DKQ +E KK++ +H TQ RL+ F+
Sbjct: 289 ANVEEIEFKWSEPDEDGLVNFLCGDKQFSEERVRNGAKKLYKARHTSTQGRLDTFF 344
>gi|317376169|sp|B3LQY3.1|FEN1_YEAS1 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|190409721|gb|EDV12986.1| structure-specific endonuclease RAD27 [Saccharomyces cerevisiae
RM11-1a]
Length = 382
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER VS E E Q+LL + G+PYIIAP EAEAQCA + V ++D D
Sbjct: 120 EKMKQERRLVKVSKEHNEEAQKLLGLMGIPYIIAPTEAEAQCAELAKKGKVYAAASEDMD 179
Query: 936 VFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ F + K + + + + L LT E+ + + ++LG DY E I G+
Sbjct: 180 TLCYRTPFLLRHLTFSETKKEPIHEIDTELVLRGLDLTIEQFVDLCIMLGCDYCESIRGV 239
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIES 1019
G V A++++ + K E+IES
Sbjct: 240 GPVTALKLIKT---HGSIEKIVEFIES 263
>gi|430813459|emb|CCJ29208.1| unnamed protein product [Pneumocystis jirovecii]
Length = 278
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 76/142 (53%), Gaps = 3/142 (2%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
++ K R ++ E EC++LL++ G+PY+ AP EAEAQCA + A V ++D
Sbjct: 122 EDMNKFSRRTVRMTREHNEECKKLLKLMGIPYVDAPCEAEAQCAALAKAGKVYAAASEDM 181
Query: 935 DVFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D+ F + +++ F ++K + ++ K+L + E+ + + +LLG DY E I G
Sbjct: 182 DILCFSTPILLRHLTFSEQKKEPITEVNLEKALKELNMPLEQFVDLCILLGCDYCEPIKG 241
Query: 992 IGIVNAIEVVNAFPEEDGLSKF 1013
IG A+E++ + D F
Sbjct: 242 IGPKRALELIREYKSLDAFINF 263
>gi|349579452|dbj|GAA24614.1| K7_Rad27p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 382
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER VS E E Q+LL + G+PYIIAP EAEAQCA + V ++D D
Sbjct: 120 EKMKQERRLVKVSKEHNEEAQKLLGLMGIPYIIAPTEAEAQCAELAKKGKVYAAASEDMD 179
Query: 936 VFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ F + K + + + + L LT E+ + + ++LG DY E I G+
Sbjct: 180 TLCYRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQFVDLCIMLGCDYCESIRGV 239
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIES 1019
G V A++++ + K E+IES
Sbjct: 240 GPVTALKLIKT---HGSIEKIVEFIES 263
>gi|6322736|ref|NP_012809.1| Rad27p [Saccharomyces cerevisiae S288c]
gi|140964|sp|P26793.1|FEN1_YEAST RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1; AltName: Full=RAD2
homolog nuclease 1; Short=RTH1 nuclease; AltName:
Full=Structure-specific endonuclease RAD27
gi|317376170|sp|C7GVJ8.1|FEN1_YEAS2 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|317376171|sp|A6ZZK4.1|FEN1_YEAS7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|317376172|sp|C8ZC62.1|FEN1_YEAS8 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|248392|gb|AAB21998.1| RAD2 homolog [Saccharomyces cerevisiae]
gi|486190|emb|CAA81953.1| RAD27 [Saccharomyces cerevisiae]
gi|151941690|gb|EDN60052.1| 5'-3'-exonuclease [Saccharomyces cerevisiae YJM789]
gi|256269907|gb|EEU05165.1| Rad27p [Saccharomyces cerevisiae JAY291]
gi|259147728|emb|CAY80978.1| Rad27p [Saccharomyces cerevisiae EC1118]
gi|285813148|tpg|DAA09045.1| TPA: Rad27p [Saccharomyces cerevisiae S288c]
gi|323347750|gb|EGA82014.1| Rad27p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764563|gb|EHN06085.1| Rad27p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298324|gb|EIW09422.1| Rad27p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 382
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER VS E E Q+LL + G+PYIIAP EAEAQCA + V ++D D
Sbjct: 120 EKMKQERRLVKVSKEHNEEAQKLLGLMGIPYIIAPTEAEAQCAELAKKGKVYAAASEDMD 179
Query: 936 VFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ F + K + + + + L LT E+ + + ++LG DY E I G+
Sbjct: 180 TLCYRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQFVDLCIMLGCDYCESIRGV 239
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIES 1019
G V A++++ + K E+IES
Sbjct: 240 GPVTALKLIKT---HGSIEKIVEFIES 263
>gi|448086968|ref|XP_004196223.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
gi|359377645|emb|CCE86028.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
Length = 636
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
Query: 884 AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARS 943
A +V+SEM L G+ Y++AP EA+ Q Y+E LVDG++++DSD+ +FG +
Sbjct: 122 AAAVTSEMAKSIMVELDARGVKYVVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGCNT 181
Query: 944 VYKNIFDDRKYVETYF--MQDIEKDLGL---TREKLIRMALLLGSDYTEGISGIGIVNAI 998
+ + D + +E ++K GL T+E+L +A+L G DYT+G GIG+ A
Sbjct: 182 LVTKLNDFGECIEICRKNFDKVKKVPGLASFTKEQLRIVAMLSGCDYTKGFPGIGLKTAF 241
Query: 999 EVV 1001
+V
Sbjct: 242 NLV 244
>gi|194750279|ref|XP_001957555.1| GF10471 [Drosophila ananassae]
gi|190624837|gb|EDV40361.1| GF10471 [Drosophila ananassae]
Length = 734
Score = 79.0 bits (193), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
+ + +C+ LL G+ + P EAEA CA++ LVDGV++ DSD F +GA VY+N
Sbjct: 122 NHVLKQCENLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFAYGAVRVYRNF 181
Query: 949 --------FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIE 999
V+ Y M++I + + K+I MALL G DY +GI GIG ++
Sbjct: 182 SVSTQGAQAAAGGAVDIYDMREITTRMDFGQHKIIVMALLCGCDYCPDGIGGIGRDGVLK 241
Query: 1000 VVNAFPEEDGLSKFREW 1016
+ N + E + L K R W
Sbjct: 242 LFNKYKETEILDKLRNW 258
>gi|256810959|ref|YP_003128328.1| flap endonuclease-1 [Methanocaldococcus fervens AG86]
gi|256794159|gb|ACV24828.1| flap structure-specific endonuclease [Methanocaldococcus fervens
AG86]
Length = 326
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E K + ++ ++ C+ LL + G+PY+ AP E EAQ +YM V VV+ D
Sbjct: 115 EEAAKYAKRVSYLTPKIVENCKYLLSLMGIPYVEAPSEGEAQASYMAKKGDVWAVVSQDY 174
Query: 935 DVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIG 993
D L+GA V +N+ ++ E + ++ +DL ++ + LI +A+ +G+DY G+ GIG
Sbjct: 175 DALLYGAPRVVRNLTTTKEMPELIELNEVLEDLRISLDDLIDIAIFIGTDYNPGGVKGIG 234
Query: 994 IVNAIEVVNA 1003
A E+V +
Sbjct: 235 FKRAYELVRS 244
>gi|150402483|ref|YP_001329777.1| flap endonuclease-1 [Methanococcus maripaludis C7]
gi|150033513|gb|ABR65626.1| XPG I [Methanococcus maripaludis C7]
Length = 324
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 83/156 (53%), Gaps = 7/156 (4%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + A + + ++LL++ G+PYI AP E EAQCA + +N V++ D
Sbjct: 115 EEMQKYAKRANFLDKKTIDNSKKLLELMGIPYINAPSEGEAQCAELVKSNDAFCVISQDY 174
Query: 935 DVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIG 993
D L+GA +V KNI K +E +Q +L ++ +LI +A+L+G+DY G+ G G
Sbjct: 175 DSILYGAENVVKNITSSNKDIELIELQKTLSELNVSLNQLIDVAILIGTDYNPGGLKGFG 234
Query: 994 IVNAIEVV------NAFPEEDGLSKFREWIESPDPT 1023
AI+ V E + S+ R+ + P+ T
Sbjct: 235 PKKAIDTVKKGQMEKYISEIENYSEIRKIFDEPNVT 270
>gi|310800740|gb|EFQ35633.1| XPG domain-containing protein [Glomerella graminicola M1.001]
Length = 394
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E A+CQ+LL++ G+PYI+AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNADCQKLLKLMGIPYIVAPTEAEAQCAVLARAGKVYAAASEDMDTLT 184
Query: 939 FGARSVYKNI-FDD--RKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ F + ++ ++ + + LG+ R++ + +LLG DY + I IG
Sbjct: 185 FDTPILLRHLTFSEARKEPIQEVHIDKVLAGLGMERKQFVDFCILLGCDYLDPIPKIGPS 244
Query: 996 NAIEVVN 1002
A++++
Sbjct: 245 TALKLIR 251
>gi|268564494|ref|XP_002639126.1| C. briggsae CBR-CRN-1 protein [Caenorhabditis briggsae]
gi|317374879|sp|A8XL25.1|FEN1_CAEBR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Cell
death-related nuclease 1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 382
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 75/130 (57%), Gaps = 3/130 (2%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +K ER V+ + E ++LL + G+P + AP EAEAQCA + A V G T+D D
Sbjct: 122 EAEKFERRLVKVTKQQNEEVKQLLGLMGIPVVEAPCEAEAQCANLVKAGKVYGTATEDMD 181
Query: 936 VFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
FG+ + +++ + +K ++ + + + +++ LT+++ I + +LLG DY I GI
Sbjct: 182 ALTFGSCVLLRHLLAPEAKKIPIKEFHLARVLEEMQLTKDQFIDLCILLGCDYCGTIRGI 241
Query: 993 GIVNAIEVVN 1002
G A+E++
Sbjct: 242 GPKKAVELIK 251
>gi|452981413|gb|EME81173.1| hypothetical protein MYCFIDRAFT_189405 [Pseudocercospora fijiensis
CIRAD86]
Length = 393
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 29/241 (12%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R V+ E E Q LL++ G+PYIIAP EAEAQCA + A V ++D
Sbjct: 120 AEEVEKFSRRTVRVTREHNQEAQRLLKLMGVPYIIAPTEAEAQCAVIARAGKVYAAASED 179
Query: 934 SDVFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGIS 990
D F + + + + F +++ ++ + + + L + + + I + +LLG DY + +
Sbjct: 180 MDTLTFASPVLLRKLTFSEQRKEPIQEIHLDRVLEGLDMDQNQFIDLCILLGCDYLDPVK 239
Query: 991 GIGIVNAIEVVNAFPEEDGLSKFRE----------WIESPDPTILGKFDVQTGASSRKRR 1040
GIG NA+ ++ +G+ E W + + DV R+
Sbjct: 240 GIGPKNALALIKEHKNLEGVVAMIEKTGKYTLPEDWPYQDARVLFQEPDV--------RQ 291
Query: 1041 SSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAF 1097
+ + D + V G+ +F F ED+ +A +N+K Q RLE F
Sbjct: 292 ADHPECDFKWENPDVDGLVKFLVEEKGFSEDRVRSGAARLQKNLK-----SSQQSRLEGF 346
Query: 1098 Y 1098
+
Sbjct: 347 F 347
>gi|41614884|ref|NP_963382.1| flap endonuclease-1 [Nanoarchaeum equitans Kin4-M]
gi|48427872|sp|P61942.1|FEN_NANEQ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|40068608|gb|AAR38943.1| NEQ088 [Nanoarchaeum equitans Kin4-M]
Length = 339
Score = 78.6 bits (192), Expect = 2e-11, Method: Composition-based stats.
Identities = 50/141 (35%), Positives = 74/141 (52%), Gaps = 12/141 (8%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E K ++ + S M E ++LL+ G+PY+ AP E EA+ AY+ + D + D D
Sbjct: 117 EAIKYAKSLGKLDSYMVEEAKKLLEAMGIPYVQAPSEGEAEAAYLTKKGVSDYCGSQDYD 176
Query: 936 VFLFGARSVYKNIFDDRK--------YV----ETYFMQDIEKDLGLTREKLIRMALLLGS 983
LFG+ V +NI K YV E ++ + +TRE+LI +A+LLG+
Sbjct: 177 SLLFGSPRVVRNITISEKRKLPGKNIYVEVKPEVIELEAVLNYWKITREQLIAIAMLLGT 236
Query: 984 DYTEGISGIGIVNAIEVVNAF 1004
DY E + GIG AIE+V F
Sbjct: 237 DYNEKVPGIGPKTAIEIVKRF 257
>gi|307102466|gb|EFN50740.1| hypothetical protein CHLNCDRAFT_37697 [Chlorella variabilis]
Length = 389
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ E EC+ LL++ G+P + AP EAEAQCA + LV G+ T+D D
Sbjct: 126 KYSKRTVRVTREHNEECKRLLRLMGVPVLEAPSEAEAQCAQLCKDGLVYGISTEDMDSLT 185
Query: 939 FGARSVYKNIF--DDRKYVETYFMQD-IEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ +K + F + + K+L LT ++ I + +L G DYT ISGIG V
Sbjct: 186 FGTPKLIRHLMAPSSQKPLAMEFDHELVLKELELTEDQFIDLCILCGCDYTAKISGIGAV 245
Query: 996 NAIEVVN 1002
A+ ++
Sbjct: 246 RALSLIK 252
>gi|261331631|emb|CBH14625.1| DNA repair protein RAD2, putative [Trypanosoma brucei gambiense
DAL972]
Length = 746
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 897 ELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVE 956
ELL G+PY+++P EA+AQCA++ +VD V T+DSDV + GA V + F ++V
Sbjct: 471 ELLDCCGIPYVLSPNEADAQCAFLNEQRVVDAVFTEDSDVIVHGAPVVLRGFFSKGRHVV 530
Query: 957 TYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNA 1003
Y D+ G+ + L+ +ALLLG DY EG++G+ ++ ++ V+ A
Sbjct: 531 AYRQSDLLA-CGVDKVVLVALALLLGCDYAEGVNGLSLLESLHVIAA 576
>gi|254567521|ref|XP_002490871.1| hypothetical protein [Komagataella pastoris GS115]
gi|238030667|emb|CAY68591.1| hypothetical protein PAS_FragB_0059 [Komagataella pastoris GS115]
Length = 686
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 81/152 (53%), Gaps = 18/152 (11%)
Query: 866 LDHEYMY--LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELA 923
+DH+ Y + ++ ++LER+ + +E+ + ++LL + + Y+I+P E EAQCAY++
Sbjct: 142 VDHDQYYKNVMEQIRELERDKWDLPAEV-VQLRKLLDNWNISYLISPGEGEAQCAYLQTQ 200
Query: 924 NLVDGVVTDDSDVFLFGARSVYKN---------------IFDDRKYVETYFMQDIEKDLG 968
LVD +VT+D D +FG V +N I +D YV M + G
Sbjct: 201 GLVDCIVTNDVDTLIFGGTLVLRNFSKNFQDKPASNTRDIPEDEFYVTPISMDKVTHATG 260
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEV 1000
L +L+ +A L G DY G++ IGI +I +
Sbjct: 261 LDTGRLLFVASLRGGDYNHGVNDIGIKRSIHL 292
>gi|118596592|dbj|BAF37955.1| putative flap endonuclease-1 [Sulfolobus sp. NO82]
Length = 304
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 13/142 (9%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E KK + + +S+EM E +ELL+ G+P + AP E EA+ AY+ + L + D D
Sbjct: 71 EFKKYAQMSIRLSNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYD 130
Query: 936 VFLFGARSVYKNIFDDRK--------YVET----YFMQDIEKDLGLTREKLIRMALLLGS 983
LFGA+ + +N+ K YVE + + K LGLTRE+LI + +++G+
Sbjct: 131 SLLFGAKRLVRNLTLSGKRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGT 190
Query: 984 DYT-EGISGIGIVNAIEVVNAF 1004
DY +GI G G+ A ++ +
Sbjct: 191 DYNPDGIKGYGVKTAYRIIKKY 212
>gi|194866945|ref|XP_001971974.1| GG14140 [Drosophila erecta]
gi|190653757|gb|EDV51000.1| GG14140 [Drosophila erecta]
Length = 726
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 75/137 (54%), Gaps = 9/137 (6%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
+ + +C+ LL G+ + P EAEA CA++ LVDGV++ DSD F +GA VY+N
Sbjct: 120 NHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFAYGAIRVYRNF 179
Query: 949 --------FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIE 999
V+ Y M++I + ++K+I MALL G DY +GI GIG ++
Sbjct: 180 SVSTQGAQAAAGGAVDIYDMREITSRMDFGQQKIIVMALLCGCDYCPDGIGGIGKDGVLK 239
Query: 1000 VVNAFPEEDGLSKFREW 1016
+ N + E + L++ R W
Sbjct: 240 LFNKYKEAEILARMRSW 256
>gi|71745604|ref|XP_827432.1| DNA repair protein RAD2 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831597|gb|EAN77102.1| DNA repair protein RAD2, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 746
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 897 ELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVE 956
ELL G+PY+++P EA+AQCA++ +VD V T+DSDV + GA V + F ++V
Sbjct: 471 ELLDCCGIPYVLSPNEADAQCAFLNEQRVVDAVFTEDSDVIVHGAPVVLRGFFSKGRHVV 530
Query: 957 TYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNA 1003
Y D+ G+ + L+ +ALLLG DY EG++G+ ++ ++ V+ A
Sbjct: 531 AYRQSDLLA-CGVDKVVLVALALLLGCDYAEGVNGLSLLESLHVIAA 576
>gi|342873165|gb|EGU75385.1| hypothetical protein FOXB_14090 [Fusarium oxysporum Fo5176]
Length = 743
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ EM + +LL+ +PY++AP EA+AQ Y+E L++G+++DDSD+ +FGA+ +
Sbjct: 122 ITPEMASALIQLLKKLDIPYVVAPYEADAQLVYLERQGLINGIISDDSDLLVFGAKKLLT 181
Query: 947 NIFDDRKYVETY---FMQDIEKDL-GLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+ +E F E L G + + RMA+ G DY G+ GIG+ A ++
Sbjct: 182 KLDQYGNCIEINRKDFCACREVSLTGWSDTEFRRMAIFSGCDYLRGLPGIGLKTAYRML 240
>gi|323332740|gb|EGA74145.1| Rad27p [Saccharomyces cerevisiae AWRI796]
Length = 370
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER VS E E Q+LL + G+PYIIAP EAEAQCA + V ++D D
Sbjct: 108 EKMKQERRLVKVSKEHNEEAQKLLGLMGIPYIIAPTEAEAQCAELAKKGKVYAAASEDMD 167
Query: 936 VFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ F + K + + + + L LT E+ + + ++LG DY E I G+
Sbjct: 168 TLCYRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQFVDLCIMLGCDYCESIRGV 227
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIES 1019
G V A++++ + K E+IES
Sbjct: 228 GPVTALKLIKT---HGSIEKIVEFIES 251
>gi|118596598|dbj|BAF37958.1| flap endonuclease-1 [Thermoplasma sp. S02]
Length = 336
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 13/127 (10%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ ++ + ++LL G+PY+ AP E EAQ +YM N VDGV++ D D LFGAR + +
Sbjct: 126 ITPQIVDDTKKLLDYMGIPYVDAPSEGEAQASYMTKKN-VDGVISQDYDCLLFGARKILR 184
Query: 947 N--IFDDRK----------YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
N I+ RK Y E + ++ + +++LI + +L+G+D+ EGI GIG
Sbjct: 185 NFAIYGRRKVPRKNIYKTVYPEYIILDEVLSANQINQDQLIGIGILVGTDFNEGIKGIGA 244
Query: 995 VNAIEVV 1001
A+ ++
Sbjct: 245 KKALALI 251
>gi|16082069|ref|NP_394495.1| flap endonuclease-1 [Thermoplasma acidophilum DSM 1728]
gi|28380022|sp|Q9HJD4.1|FEN_THEAC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|10640350|emb|CAC12164.1| DNA repair protein RAD2 related protein [Thermoplasma acidophilum]
Length = 336
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 73/127 (57%), Gaps = 13/127 (10%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ ++ + ++LL G+PY+ AP E EAQ +YM N VDGV++ D D LFGAR + +
Sbjct: 126 ITPQIVDDTKKLLDYMGIPYVDAPSEGEAQASYMTKKN-VDGVISQDYDCLLFGARKILR 184
Query: 947 N--IFDDRK----------YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
N I+ RK Y E + ++ + +++LI + +L+G+D+ EGI GIG
Sbjct: 185 NFAIYGRRKVPRKNIYKTVYPEYIILDEVLSANQINQDQLIGIGILVGTDFNEGIKGIGA 244
Query: 995 VNAIEVV 1001
A+ ++
Sbjct: 245 KKALALI 251
>gi|91773853|ref|YP_566545.1| flap endonuclease-1 [Methanococcoides burtonii DSM 6242]
gi|121684238|sp|Q12UT1.1|FEN_METBU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|91712868|gb|ABE52795.1| FEN1 flap endonuclease with 5'-3' exonuclease activity
[Methanococcoides burtonii DSM 6242]
Length = 338
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 76/142 (53%), Gaps = 14/142 (9%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L +E K + + V+ EM + LL++ G+PY+ AP E EAQ +YM D + +
Sbjct: 113 LEEEAYKYAQASSKVTREMIDDSVRLLELMGIPYVKAPSEGEAQASYMVQKGDADYIGSQ 172
Query: 933 DSDVFLFGARSVY-------------KNIFDDRKYVETYFMQDIEKDLGLTREKLIRMAL 979
D D FLFGA V KNI+ D K E + D +LG+TR++LI +A+
Sbjct: 173 DYDSFLFGAPQVVRNLTITGKRKLPKKNIYVDVK-PEVLSLVDSLGELGITRQQLIDIAM 231
Query: 980 LLGSDYTEGISGIGIVNAIEVV 1001
+G+DY G+ IG A+++V
Sbjct: 232 CVGTDYNTGLENIGPKRALKLV 253
>gi|333910543|ref|YP_004484276.1| Flap structure-specific endonuclease [Methanotorris igneus Kol 5]
gi|333751132|gb|AEF96211.1| Flap structure-specific endonuclease [Methanotorris igneus Kol 5]
Length = 326
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
DE +K + ++ ++ ++LL + G+PY+ AP E E Q +YM V V++ D
Sbjct: 115 DEMQKYAKRMNFLTKDIVENSKKLLDLMGVPYVNAPAEGEGQASYMAKKGDVFCVISQDY 174
Query: 935 DVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIG 993
D L+GA + +N+ ++ +E ++++ +LG++ + LI MA+L+G+DY +G+ GIG
Sbjct: 175 DALLYGAPRIVRNLTATKEELELIELENVLNELGISHDDLIDMAILIGTDYNPKGVKGIG 234
Query: 994 IVNAIEVVNA 1003
A+E+V +
Sbjct: 235 PKKALEIVKS 244
>gi|288931681|ref|YP_003435741.1| flap structure-specific endonuclease [Ferroglobus placidus DSM 10642]
gi|288893929|gb|ADC65466.1| flap structure-specific endonuclease [Ferroglobus placidus DSM 10642]
Length = 336
Score = 78.6 bits (192), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 12/143 (8%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
G++ KK + V + + LL+ G+PY+ AP E EAQ AYM D + D
Sbjct: 112 GEDAKKYAQATAKVDEYIVESSKTLLEYLGIPYVQAPSEGEAQAAYMVRKGDADYTGSQD 171
Query: 934 SDVFLFGARSVYKN--IFDDRK------YVETYF-MQDIE---KDLGLTREKLIRMALLL 981
D LFG+ + +N + RK YVE + D+E K LG+TRE+LI +A+L+
Sbjct: 172 YDSLLFGSPKLARNLTVTGKRKLPGKNVYVEIKPEIIDLEANLKKLGITREQLIDVAILV 231
Query: 982 GSDYTEGISGIGIVNAIEVVNAF 1004
G+DY EG+ GIG A++ V +
Sbjct: 232 GTDYNEGVKGIGAKKALKYVKTY 254
>gi|311977771|ref|YP_003986891.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
gi|82000308|sp|Q5UQW7.1|YL386_MIMIV RecName: Full=Putative endonuclease L386
gi|55417005|gb|AAV50655.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
gi|308204373|gb|ADO18174.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
gi|339061318|gb|AEJ34622.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
mimivirus]
Length = 473
Score = 78.6 bits (192), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM------ELANLVDGV 929
E++KL ++ ++SE E Q LL + G+PYIIAP EA+ C+++ V GV
Sbjct: 121 EKRKLRKDRFKLTSEDIKEVQILLDLMGIPYIIAPGEADVICSWLCARHDSNGKRYVKGV 180
Query: 930 VTDDSDVFLFGARSVYKNIF---DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
T+DSD+ GA ++K++ + K + ++D+ LGLT + I + +LLG DY
Sbjct: 181 CTEDSDMLPLGAPYMFKDMLGLNNLNKNIIIVKLKDVLGFLGLTMNEFIDLCVLLGCDYC 240
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKF 1013
+ I GIG NA +++ + D + +F
Sbjct: 241 DNIKGIGPKNAYKLIVEYRTLDKVLEF 267
>gi|351737540|gb|AEQ60575.1| putative endonuclease of the XPG family [Acanthamoeba castellanii
mamavirus]
gi|398257219|gb|EJN40827.1| putative endonuclease of the XPG family [Acanthamoeba polyphaga
lentillevirus]
Length = 473
Score = 78.6 bits (192), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/147 (33%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYM------ELANLVDGV 929
E++KL ++ ++SE E Q LL + G+PYIIAP EA+ C+++ V GV
Sbjct: 121 EKRKLRKDRFKLTSEDIKEVQILLDLMGIPYIIAPGEADVICSWLCARHDSNGKRYVKGV 180
Query: 930 VTDDSDVFLFGARSVYKNIF---DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
T+DSD+ GA ++K++ + K + ++D+ LGLT + I + +LLG DY
Sbjct: 181 CTEDSDMLPLGAPYMFKDMLGLNNLNKNIIIVKLKDVLGFLGLTMNEFIDLCVLLGCDYC 240
Query: 987 EGISGIGIVNAIEVVNAFPEEDGLSKF 1013
+ I GIG NA +++ + D + +F
Sbjct: 241 DNIKGIGPKNAYKLIVEYRTLDKVLEF 267
>gi|118596590|dbj|BAF37954.1| putative flap endonuclease-1 [Sulfolobus sp. M02]
Length = 304
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 13/142 (9%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E KK + + +++EM E +ELL+ G+P + AP E EA+ AY+ + L + D D
Sbjct: 71 ELKKYAQMSIKLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYD 130
Query: 936 VFLFGARSVYKNIFDDRK--------YVET----YFMQDIEKDLGLTREKLIRMALLLGS 983
LFGA+ + +N+ K YVE + + K LGLTRE+LI + +++G+
Sbjct: 131 SLLFGAKRLVRNLTLTGKRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGT 190
Query: 984 DYT-EGISGIGIVNAIEVVNAF 1004
DY +GI G G+ A ++ +
Sbjct: 191 DYNPDGIKGYGVKTAYRIIKKY 212
>gi|444323335|ref|XP_004182308.1| hypothetical protein TBLA_0I01290 [Tetrapisispora blattae CBS 6284]
gi|387515355|emb|CCH62789.1| hypothetical protein TBLA_0I01290 [Tetrapisispora blattae CBS 6284]
Length = 387
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER V+ E E ++LL + G+PYI AP EAEAQCA + A +V ++D D
Sbjct: 120 EKIKHERRLVKVTKEHNEEAKKLLGLMGIPYITAPSEAEAQCAELAKAGVVYAAASEDMD 179
Query: 936 VFLFGARSVYKNIFDDRKYVETYFMQDIE---KDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ E D+E + L LT E+ I + ++LG DY + I G+
Sbjct: 180 TLCYRVPHLLRHLTFSEAKKEPIHELDVEVVLRGLDLTIEQFIDLGIMLGCDYCDSIRGV 239
Query: 993 GIVNAIEVVNAF 1004
G V A++++ F
Sbjct: 240 GPVTALKLIKEF 251
>gi|294657671|ref|XP_459977.2| DEHA2E15444p [Debaryomyces hansenii CBS767]
gi|199432866|emb|CAG88226.2| DEHA2E15444p [Debaryomyces hansenii CBS767]
Length = 678
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 70/126 (55%), Gaps = 5/126 (3%)
Query: 884 AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARS 943
A V+ EM L M + YI+AP EA+ Q Y+E LVDG++++DSD+ +FG +
Sbjct: 122 AAGVTPEMAKSIMVELDMRKVKYIVAPYEADPQMVYLERIGLVDGILSEDSDLLIFGCNT 181
Query: 944 VYKNIFDDRKYVETY---F--MQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
+ + D + +E F ++ I T+E+L +A+L G DYT+GI GIG+ A
Sbjct: 182 LITKLNDYGECIEICRDNFCNVKKIPFLSNYTQEQLRLVAMLSGCDYTKGIPGIGLKTAF 241
Query: 999 EVVNAF 1004
+V F
Sbjct: 242 NLVKRF 247
>gi|336122204|ref|YP_004576979.1| Flap structure-specific endonuclease [Methanothermococcus okinawensis
IH1]
gi|334856725|gb|AEH07201.1| Flap structure-specific endonuclease [Methanothermococcus okinawensis
IH1]
Length = 324
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L D QK +R + ++ + LL + G+P+I AP E EAQC+YM V VV+
Sbjct: 114 LEDMQKYAKR-INYLEPKVVENSKRLLNLMGIPFINAPSEGEAQCSYMAKKGDVYAVVSQ 172
Query: 933 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISG 991
D D L+GA +NI K +E + ++ L +T + LI MA+L+G+DY G+ G
Sbjct: 173 DYDALLYGAPRTVRNITASNKPLELIELDEVLGALNITLDNLIDMAILIGTDYNIGGVKG 232
Query: 992 IGIVNAIEVV 1001
IG A+++V
Sbjct: 233 IGPKKALDIV 242
>gi|167536429|ref|XP_001749886.1| hypothetical protein [Monosiga brevicollis MX1]
gi|317374912|sp|A9VB27.1|FEN1_MONBE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|163771601|gb|EDQ85265.1| predicted protein [Monosiga brevicollis MX1]
Length = 368
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
++ +K R V+ E +C++LL + G+P+IIAP EAEAQCA + V T+D
Sbjct: 121 EQMEKFSRRLVHVTREHNEQCRQLLTLMGIPFIIAPTEAEAQCAELVKGGKVFATATEDM 180
Query: 935 DVFLFGARSVYKNI-FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIG 993
D FG + +++ F + + + + + L ++ E+ I M +LLG DY + I GIG
Sbjct: 181 DALTFGTTVLLRHMTFSEARKMPIQEFRLQKGGLEMSMEEFIDMCILLGCDYCDSIKGIG 240
Query: 994 IVNAIEVVN-----------------AFPEEDGLSKFREWIESPDPT 1023
A +++ PE+ ++ RE PD T
Sbjct: 241 RQKAYQLIKEHKNIETVLKHLDPKKYVIPEDWHFAEARELFLRPDVT 287
>gi|15920393|ref|NP_376062.1| flap endonuclease-1 [Sulfolobus tokodaii str. 7]
Length = 304
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 13/142 (9%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E KK + + +++EM E +ELL+ G+P + AP E EA+ AY+ + L + D D
Sbjct: 71 ELKKYAQMSIRLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYD 130
Query: 936 VFLFGARSVYKNIFDDRK--------YVET----YFMQDIEKDLGLTREKLIRMALLLGS 983
LFGA+ + +N+ K YVE + + K LGLTRE+LI + +++G+
Sbjct: 131 SLLFGAKRLIRNLTLSGKRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGT 190
Query: 984 DYT-EGISGIGIVNAIEVVNAF 1004
DY +GI G G+ A ++ +
Sbjct: 191 DYNPDGIKGYGVKTAYRIIKKY 212
>gi|47224621|emb|CAG03605.1| unnamed protein product [Tetraodon nigroviridis]
Length = 577
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 27/130 (20%)
Query: 891 MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD 950
+ EC ++L + G+P++ A EAEA CAY++ LVDG +T+D DVFL+GA++VY++
Sbjct: 68 VLKECADMLDILGVPWVTAAGEAEAMCAYLDSQGLVDGCITNDGDVFLYGAQTVYRSFNM 127
Query: 951 DRK--YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEED 1008
+ K V+ Y + GI G+G A++++ E+
Sbjct: 128 NTKDPLVDCY-------------------------KTSRGIQGVGKEQALKLIRMLKEQT 162
Query: 1009 GLSKFREWIE 1018
L F +W E
Sbjct: 163 LLQWFTQWKE 172
>gi|317374918|sp|C1BM18.1|FEN1_OSMMO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|225708450|gb|ACO10071.1| Flap endonuclease 1-B [Osmerus mordax]
Length = 380
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 120/256 (46%), Gaps = 31/256 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PY+ AP EAEA CA + A V T+D D
Sbjct: 125 KFSKRLVKVTRQHNDECKKLLTLMGVPYVEAPCEAEASCAALVKAGKVFATATEDMDGLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K ++ + I +D+GL+ E+ I + +LLG DY I GIG
Sbjct: 185 FGTGVLLRHLTASEAKKLPIQEFHFSRILQDIGLSHEQFIDLCILLGCDYCGTIKGIGPK 244
Query: 996 NAIEVVNA------FPEEDGLSKF---REWIESPDPTILGKFDVQTGASSRKRRSSDGDK 1046
A++++ + LSK +W+ + DV S + + S+ D+
Sbjct: 245 RAMDLIRQHGSIEEILDNIDLSKHPVPEDWLYKEARGLFLTPDV-VDCSCLELKWSEPDE 303
Query: 1047 DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH--TQLRLEAFYTFNERF 1104
+ G+ +F + QF ED+ KKI + TQ RL++F++
Sbjct: 304 E---------GLVQFMCAEKQFSEDRM----RNGCKKILKSRQGSTQGRLDSFFSVT--- 347
Query: 1105 AKIRSKRIKKAVKGIT 1120
+ SKR + +KG T
Sbjct: 348 GSLSSKRKEPEMKGST 363
>gi|317374875|sp|C3KJE6.1|FEN1_ANOFI RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|229367576|gb|ACQ58768.1| Flap endonuclease 1-A [Anoplopoma fimbria]
Length = 380
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 116/248 (46%), Gaps = 19/248 (7%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PYI AP EAEA CA + A V T+D D
Sbjct: 125 KFSKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEATCAALVKAGKVFATATEDMDGLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K ++ I +D+GLT E+ I + + LG DY I GIG
Sbjct: 185 FGTNVLLRHLTASEAKKLPIQELHYSRILQDIGLTNEQFIDLCIPLGCDYCGTIKGIGPK 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIES---PDPTILGKFDVQTGASSRKRRSSDGDKDVNYAK 1052
AI+++ + + + E I+S P P + G + D+ +++
Sbjct: 245 RAIDLIK---QHGSIEEILENIDSSKHPAPEDW-LYKEARGLFLKAEVVDCSTVDLKWSE 300
Query: 1053 NSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH--TQLRLEAFYTFNERFAKIRSK 1110
G+ +F + QF ED+ KKI + TQ RL++F++ + SK
Sbjct: 301 PDEEGLIQFMCNEKQFSEDRM----RNGCKKILKSRQGSTQGRLDSFFSIT---GSLSSK 353
Query: 1111 RIKKAVKG 1118
R + +KG
Sbjct: 354 RKEPELKG 361
>gi|240103256|ref|YP_002959565.1| flap endonuclease-1 [Thermococcus gammatolerans EJ3]
gi|259645974|sp|C5A639.1|FEN_THEGJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|239910810|gb|ACS33701.1| Flap structure-specific endonuclease (fen) [Thermococcus
gammatolerans EJ3]
Length = 339
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E KK A ++ + + ++LL + G+P + AP E EAQ AYM V + D
Sbjct: 115 EEAKKYAMRATKLNETLIEDAKKLLGLMGVPVVQAPSEGEAQAAYMAAKKRVYASASQDY 174
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA + +N I RK YVE ++++ ++LG+ REKLI +A+L+G
Sbjct: 175 DSLLFGAPRLVRNLTITGRRKLPGKNVYVEVKPELIVLEEVLRELGIDREKLIELAILVG 234
Query: 983 SDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
+DY GI GIG A+ +V +D L K+++
Sbjct: 235 TDYNPGGIKGIGPKKALTIVKR--SKDPLKKYQK 266
>gi|343471550|emb|CCD16055.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 492
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Query: 874 GDEQ--KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
GD++ +K+ + VS E E + LLQ+ G+P + AP EAEAQCA + + V T
Sbjct: 162 GDDEAMEKMSKRMVRVSREQMDEVKTLLQLMGIPVVQAPSEAEAQCAELVRKDKAWAVGT 221
Query: 932 DDSDVFLFGARSVYKNIF---DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEG 988
+D D FGAR + +++ ++ + Y ++DI + G+T E+ I + +LLG DY
Sbjct: 222 EDMDALAFGARVMLRHLTYGEAKKRPIAEYHLEDILELAGMTMEQFIDLCILLGCDYVPK 281
Query: 989 ISGIGIVNAIEVVNAF 1004
I GIG A E + +
Sbjct: 282 IPGIGPHKAWEGIKKY 297
>gi|319411532|emb|CBQ73576.1| related to EXO1-exonuclease which interacts with Msh2p [Sporisorium
reilianum SRZ2]
Length = 758
Score = 78.2 bits (191), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ EM + ++L+ +PY++AP EA+AQ AY+E +VDG++T+DSD+ +FG ++V
Sbjct: 125 ITPEMAFQLIKVLKEERIPYVVAPYEADAQLAYLEAEGIVDGIITEDSDLLVFGCKTVLF 184
Query: 947 NIFDDRKYVETY---FMQDIEKDL-GLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+ VE F + + L G T + +MA+L G DY I G+G+ NA ++
Sbjct: 185 KLDQAGNAVEMLQQRFWTNRQIALSGWTAVEFRQMAILSGCDYLPSIVGMGLKNAHRLLR 244
Query: 1003 AF 1004
+
Sbjct: 245 RY 246
>gi|401624921|gb|EJS42958.1| rad27p [Saccharomyces arboricola H-6]
Length = 382
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER VS E E Q+LL + G+PYIIAP EAEAQCA + V ++D D
Sbjct: 120 EKMKQERRLVKVSKEHNEEAQKLLGLMGIPYIIAPTEAEAQCAELAKKGKVYAAASEDMD 179
Query: 936 VFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ F + K + + + + L LT E+ + + ++LG DY E I G+
Sbjct: 180 TLCYRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQFVDLCIMLGCDYCESIRGV 239
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIES 1019
G V A++++ + K E+IES
Sbjct: 240 GPVTALKLMKT---HGSIEKIIEYIES 263
>gi|253744402|gb|EET00616.1| Flap structure-specific endonuclease [Giardia intestinalis ATCC
50581]
Length = 361
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Query: 878 KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVF 937
K+L R V+ + + ++LL + G+PY++A EAEAQC M A L +GV + D DV
Sbjct: 125 KQLSRRTVKVTQQHCKQAEKLLDILGIPYVVAAGEAEAQCVAMAKAGLCEGVASSDLDVL 184
Query: 938 LFGARSVYKNIFD--DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ S+ +N+ D++ +E + + +LG + ++ + + +L G DY + GIG
Sbjct: 185 AFGSPSLIRNLAQGGDKEIMEIN-LDTVLNELGFSYDEFLDLCILCGCDYANSLEGIGPK 243
Query: 996 NAIEVVNAF 1004
A +++ +
Sbjct: 244 TAYKLIVKY 252
>gi|118596582|dbj|BAF37950.1| putative flap endonuclease-1 [Sulfolobus sp. Tu A]
gi|118596584|dbj|BAF37951.1| putative flap endonuclease-1 [Sulfolobus sp. Tu B-1]
gi|118596586|dbj|BAF37952.1| putative flap endonuclease-1 [Sulfolobus sp. Sko-3]
gi|118596588|dbj|BAF37953.1| putative flap endonuclease-1 [Sulfolobus sp. Ta]
Length = 304
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 13/142 (9%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E KK + + +++EM E +ELL+ G+P + AP E EA+ AY+ + L + D D
Sbjct: 71 ELKKYAQMSIRLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYD 130
Query: 936 VFLFGARSVYKNIFDDRK--------YVET----YFMQDIEKDLGLTREKLIRMALLLGS 983
LFGA+ + +N+ K YVE + + K LGLTRE+LI + +++G+
Sbjct: 131 SLLFGAKRLIRNLTLTGKRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGT 190
Query: 984 DYT-EGISGIGIVNAIEVVNAF 1004
DY +GI G G+ A ++ +
Sbjct: 191 DYNPDGIKGYGVKTAYRIIKKY 212
>gi|341882587|gb|EGT38522.1| hypothetical protein CAEBREN_12338 [Caenorhabditis brenneri]
gi|341895701|gb|EGT51636.1| hypothetical protein CAEBREN_24192 [Caenorhabditis brenneri]
Length = 382
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 74/129 (57%), Gaps = 3/129 (2%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +K ER V+ + E + LL + G+P + AP EAEAQCA++ A V G T+D D
Sbjct: 122 EAEKFERRLVKVTKQQNEEVKHLLGLMGIPVVEAPCEAEAQCAHLVKAGKVFGTATEDMD 181
Query: 936 VFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
FG+ + +++ + +K ++ + + + +++ L+ ++ I + +LLG DY I G+
Sbjct: 182 ALTFGSSVLLRHLLAPESKKIPIKEFHLARVLEEMKLSEDEFIDLCILLGCDYCGTIRGV 241
Query: 993 GIVNAIEVV 1001
G A+E++
Sbjct: 242 GPKKAVELI 250
>gi|412993680|emb|CCO14191.1| predicted protein [Bathycoccus prasinos]
Length = 390
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
D +K + VS E E L+++ G+P AP EAEA CA M A LV G T+D
Sbjct: 122 DAIEKAAKRTVRVSKEQNQEVMRLVKLLGVPVFEAPCEAEATCAAMCKAGLVHGAATEDM 181
Query: 935 DVFLFGARSVYKNIF---DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D F + +N+ +K + Y + K L L ++ I + +L G DYT+ I G
Sbjct: 182 DTLTFACPRLIRNLMAPASQKKDIAEYDFDKVLKGLDLDYDQFIDLCILCGCDYTDSIRG 241
Query: 992 IGIVNAIEVVNAF 1004
IG V A++++ +
Sbjct: 242 IGPVTALQLIREY 254
>gi|374632950|ref|ZP_09705317.1| flap structure-specific endonuclease [Metallosphaera yellowstonensis
MK1]
gi|373524434|gb|EHP69311.1| flap structure-specific endonuclease [Metallosphaera yellowstonensis
MK1]
Length = 301
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 79/143 (55%), Gaps = 13/143 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + + ++ M E +ELL G+P + AP E EA+ AY+ N+ + D
Sbjct: 68 EEMRKYSQMSSRLTKGMAEESKELLSRMGVPIVNAPSEGEAEAAYLNYKNITFAAASQDY 127
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA+ + +N I RK YVE + ++ + LGLTRE+LI +A+L+G
Sbjct: 128 DSLLFGAKRLIRNLTITGKRKLPNKDVYVEIKPEMIELDELLRKLGLTREQLIDVAILIG 187
Query: 983 SDYT-EGISGIGIVNAIEVVNAF 1004
+DY +GI GIG A +++ +
Sbjct: 188 TDYNPDGIKGIGPKTAYKLIRTY 210
>gi|303312977|ref|XP_003066500.1| DNA-repair protein Rad2, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240106162|gb|EER24355.1| DNA-repair protein Rad2, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 359
Score = 78.2 bits (191), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 89 KFSRRTVRVTREHNEECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 148
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + + +++ F +++ ++ ++ + + LG+ R++ + + +LLG DY + I +G
Sbjct: 149 FDSPILLRHLTFSEQRKEPIQEIHLERVLEGLGMDRKQFVDLCILLGCDYVDPIPKVGPN 208
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNS- 1054
A++++ + L K E +E+ DP K+ + + R + DV A +
Sbjct: 209 TALKMIR---DHGSLEKVVEAMEN-DPK--KKYTIPEDWPYEQARDLFFEPDVRPADHPE 262
Query: 1055 ---------VGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
V G+ +F F ED+ +A +N+K Q RLE F+
Sbjct: 263 CDFKWESPDVEGLVKFLVEGKGFSEDRVRSGAARLQKNLKTA-----QQSRLEGFF 313
>gi|156845450|ref|XP_001645616.1| hypothetical protein Kpol_1033p65 [Vanderwaltozyma polyspora DSM
70294]
gi|317376167|sp|A7TJ59.1|FEN1_VANPO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|156116281|gb|EDO17758.1| hypothetical protein Kpol_1033p65 [Vanderwaltozyma polyspora DSM
70294]
Length = 377
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER VS E E ++LL++ G+PYI AP EAE+QCA + V ++D D
Sbjct: 120 EKMKQERRLVKVSKEHNDEAKQLLELMGIPYITAPCEAESQCAELAKCGKVYAAASEDMD 179
Query: 936 VFLFGARSVYKNIFDDRKYVETYFMQDIE---KDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ E D E K L LT E+ + + ++LG DY + I G+
Sbjct: 180 TLCYRTPYLLRHLTFSEAKKEPIHEIDTELVLKGLDLTLEQFVDLGIMLGCDYCDSIKGV 239
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIES 1019
G V A++++ E L K E+IES
Sbjct: 240 GPVTALKLIK---EYGSLEKIIEYIES 263
>gi|195587930|ref|XP_002083714.1| GD13208 [Drosophila simulans]
gi|194195723|gb|EDX09299.1| GD13208 [Drosophila simulans]
Length = 726
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
+ + +C+ LL G+ + P EAEA CA++ LVDGV++ DSD F +GA VY+N
Sbjct: 120 NHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFAYGAVRVYRNF 179
Query: 949 --------FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIE 999
V+ Y M++I + ++K+I MALL G DY +GI GIG ++
Sbjct: 180 SVSTQGAQAAAGGAVDIYDMREITSRMDFGQQKIIVMALLCGCDYCPDGIGGIGKDGVLK 239
Query: 1000 VVNAFPEEDGLSKFREW 1016
+ N + E + L + R W
Sbjct: 240 LFNKYKETEILDRMRSW 256
>gi|448082392|ref|XP_004195129.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
gi|359376551|emb|CCE87133.1| Piso0_005672 [Millerozyma farinosa CBS 7064]
Length = 636
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 884 AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARS 943
A +V+SEM L G+ Y++AP EA+ Q Y+E LVDG++++DSD+ +FG +
Sbjct: 122 AAAVTSEMAKSIMVELDARGVKYVVAPYEADPQMVYLEKIGLVDGILSEDSDLLIFGCNT 181
Query: 944 VYKNIFDDRKYVETYF--MQDIEKDLGL---TREKLIRMALLLGSDYTEGISGIGIVNAI 998
+ + D + +E ++K GL T E+L +A+L G DYT+G GIG+ A
Sbjct: 182 LVTKLNDFGECIEICRKNFDKVKKVPGLASFTEEQLRIVAMLSGCDYTKGFPGIGLKTAF 241
Query: 999 EVV 1001
+V
Sbjct: 242 NLV 244
>gi|413932541|gb|AFW67092.1| hypothetical protein ZEAMMB73_718764 [Zea mays]
Length = 411
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 76/136 (55%), Gaps = 5/136 (3%)
Query: 871 MYLGDEQ--KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDG 928
M +GDE +K + V+ +C+ LL++ G+P + AP EAEAQCA + + V
Sbjct: 116 MEIGDENAIEKFSKRTVKVTGRHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQVYA 175
Query: 929 VVTDDSDVFLFGARSVYKNIFD---DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
V ++D D FGAR +++ D + V + + + ++LGLT ++ I + +L G DY
Sbjct: 176 VASEDMDTLTFGARRFLRHLTDLGYKKSPVTEFDVSKVLEELGLTMDQFIDLCILSGCDY 235
Query: 986 TEGISGIGIVNAIEVV 1001
E I GIG A++++
Sbjct: 236 CENIRGIGGQRALKLI 251
>gi|355570852|ref|ZP_09042122.1| Flap structure-specific endonuclease [Methanolinea tarda NOBI-1]
gi|354826134|gb|EHF10350.1| Flap structure-specific endonuclease [Methanolinea tarda NOBI-1]
Length = 333
Score = 77.8 bits (190), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E + R++ + E+ A ++L+ + GLP+I AP E EAQ AYM + VV+ D
Sbjct: 116 EEAYRQARSSSRIDEEIIATSRQLITLLGLPWIQAPSEGEAQAAYMVMRGDARYVVSQDY 175
Query: 935 DVFLFGARSVYKNIFDDRK----------YVETYFMQDIEKDLGLTREKLIRMALLLGSD 984
D LFGA + +N+ K E + + L ++RE LIR+ LL+G+D
Sbjct: 176 DTLLFGAPVLVRNLTVSGKRKVRGRTLAIMPERIVLSSVLTGLEISREDLIRVGLLVGTD 235
Query: 985 YTEGISGIGIVNAIEVV 1001
+ GI G+G A+ +V
Sbjct: 236 FNPGIRGVGAKTALRMV 252
>gi|326470331|gb|EGD94340.1| flap endonuclease [Trichophyton tonsurans CBS 112818]
Length = 376
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC+ LL + G+PY+ AP EAEAQCA + A V G ++D D
Sbjct: 106 KFSRRTVRVTREHNAECKRLLGLMGIPYLDAPTEAEAQCAVLAKAGKVFGAASEDMDTLC 165
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F A + +++ F +++ +E + + +E LG+ + + + +LLG DY + I +G
Sbjct: 166 FAAPVLLRHLTFSEQRKEPILEIHLDKVLE-GLGMDMTQFVDLCILLGCDYLDPIPKVGP 224
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV------ 1048
A++++ + L K E IES DP K+ + + R + DV
Sbjct: 225 NTALKMIR---DHGTLEKVVEAIES-DPK--KKYVIPEDWPYLQARELFFNPDVRPADAP 278
Query: 1049 ----NYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
++ V G+ F F ED+ +A ++N+K Q RLE F+
Sbjct: 279 ECDFKWSAPDVEGLVRFLVEEKGFSEDRVRNGAARLTKNLK-----SAQQSRLEGFF 330
>gi|308159723|gb|EFO62244.1| Flap structure-specific endonuclease [Giardia lamblia P15]
Length = 361
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Query: 878 KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVF 937
K+L R V+ + + + LL + G+PYIIA EAEAQC M L +GV + D DV
Sbjct: 125 KQLSRRTVKVTQQHCKQAERLLDVLGIPYIIAAGEAEAQCVAMAKERLCEGVASSDLDVL 184
Query: 938 LFGARSVYKNIFD--DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +N+ DR+ +E + + K+LG + ++ + + +L G DY + GIG
Sbjct: 185 AFGSPCLIRNLAQGGDREIMEIN-LNIVLKELGFSYDEFLDLCILCGCDYANSLEGIGPK 243
Query: 996 NAIEVV 1001
A +++
Sbjct: 244 TAYKLI 249
>gi|358333862|dbj|GAA32436.2| flap endonuclease-1 [Clonorchis sinensis]
Length = 350
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 85/153 (55%), Gaps = 3/153 (1%)
Query: 852 AEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPM 911
A+ TE+ +E ++ E + +K + V+ + +C+ELL++ G+PYI AP
Sbjct: 62 AKRTERRIESSRELAKAEEEEDLEAIEKFSKRLVKVTPQHNDDCKELLRLMGVPYIKAPG 121
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI-FDD-RKY-VETYFMQDIEKDLG 968
EAEAQCA + A V V T+D D FG + +++ F + RK ++ + + + L
Sbjct: 122 EAEAQCAALAKAGKVYAVGTEDMDALAFGCPVLLRHLTFSEARKLPIQEFNLPSVLAGLE 181
Query: 969 LTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
L+ ++ + + +LLG DY + I GIG AI+++
Sbjct: 182 LSMDQFVDLCILLGCDYVDTIRGIGPKKAIDLL 214
>gi|300707184|ref|XP_002995811.1| hypothetical protein NCER_101198 [Nosema ceranae BRL01]
gi|239605030|gb|EEQ82140.1| hypothetical protein NCER_101198 [Nosema ceranae BRL01]
Length = 265
Score = 77.8 bits (190), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
VS E +C+ LL++ G+PY+ AP EAEA CAY+ VD V T+D D FGA + +
Sbjct: 132 VSEEHVNDCKRLLKLMGIPYLTAPSEAEAFCAYLCKVKCVDAVATEDMDALPFGAPVLLR 191
Query: 947 NIFD---DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIG 993
+ +V Y +Q +L + + I + +LLG DYTE GIG
Sbjct: 192 GFSSAAVKKTHVTEYNLQTCLGELDMNLPEFIDLCILLGCDYTESGKGIG 241
>gi|410074109|ref|XP_003954637.1| hypothetical protein KAFR_0A00640 [Kazachstania africana CBS 2517]
gi|372461219|emb|CCF55502.1| hypothetical protein KAFR_0A00640 [Kazachstania africana CBS 2517]
Length = 379
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER VS E E ++LL++ G+PY+ AP EAEAQCA + V ++D D
Sbjct: 120 EKIKHERRLVKVSKEHNDEAKKLLELMGIPYVNAPCEAEAQCAELAKVGKVYAAASEDMD 179
Query: 936 VFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ F + K ++ + + + + LT E+ I + ++LG DY E I G+
Sbjct: 180 TLCYRTPYLVRHLTFSEAKKEPIQEINTEIVLQSMDLTLEQFIDLGIMLGCDYCESIRGV 239
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPD 1021
G V A++++ E L K E+I+S D
Sbjct: 240 GPVTALKLIK---EHGSLEKIVEYIDSGD 265
>gi|365759754|gb|EHN01528.1| Rad27p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 380
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER VS E E Q+LL + G+PYIIAP EAEAQCA + V ++D D
Sbjct: 120 EKMKQERRLVKVSKEHNEEAQKLLGLMGVPYIIAPTEAEAQCAELAKKGKVYAAASEDMD 179
Query: 936 VFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ F + K + + + + L LT E+ + + ++LG DY E I G+
Sbjct: 180 TLCYRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQFVDLCIMLGCDYCESIRGV 239
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIES 1019
G V A++++ + K E+IES
Sbjct: 240 GPVTALKLMRT---HGSIEKIIEFIES 263
>gi|24658219|ref|NP_647943.2| XPG-like endonuclease [Drosophila melanogaster]
gi|74870583|sp|Q9VRJ0.1|GEN_DROME RecName: Full=Flap endonuclease GEN; AltName: Full=Flap
structure-specific endonuclease GEN; AltName:
Full=Xpg-like endonuclease; Short=DmGEN
gi|7295491|gb|AAF50805.1| XPG-like endonuclease [Drosophila melanogaster]
gi|21711755|gb|AAM75068.1| RE33588p [Drosophila melanogaster]
gi|220949066|gb|ACL87076.1| Gen-PA [synthetic construct]
Length = 726
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
+ + +C+ LL G+ + P EAEA CA++ LVDGV++ DSD F +GA VY+N
Sbjct: 120 NHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFAYGAVRVYRNF 179
Query: 949 --------FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIE 999
V+ Y M++I + ++K+I MALL G DY +GI GIG ++
Sbjct: 180 SVSTQGAQAAAGGAVDIYDMREITSRMDFGQQKIIVMALLCGCDYCPDGIGGIGKDGVLK 239
Query: 1000 VVNAFPEEDGLSKFREW 1016
+ N + E + L + R W
Sbjct: 240 LFNKYKETEILDRMRSW 256
>gi|219850742|ref|YP_002465174.1| flap endonuclease-1 [Methanosphaerula palustris E1-9c]
gi|254788674|sp|B8GIA0.1|FEN_METPE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|219545001|gb|ACL15451.1| XPG I domain protein [Methanosphaerula palustris E1-9c]
Length = 333
Score = 77.8 bits (190), Expect = 5e-11, Method: Composition-based stats.
Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 15/165 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E K R + V+ E+ A +ELL + G+P + AP E EAQ A M + V V+ D
Sbjct: 116 EEAYKQARASSRVTPEIIATSKELLTLMGVPCVQAPSEGEAQAASMAASGAVTYAVSQDY 175
Query: 935 DVFLFGARSVYKNIFDDRK----------YVETYFMQDIEKDLGLTREKLIRMALLLGSD 984
D LFGA + +N+ K E+ + ++ LG+TRE+LI +L+G+D
Sbjct: 176 DSLLFGAPLLVRNLTVSSKRRVQGRTIAVQPESIRLDEVLGGLGITREQLIEAGILIGTD 235
Query: 985 YTEGISGIGIVNAIEVVNAFPEEDGLSKF-REWIESPDPTILGKF 1028
+ GI G+G A+++V ++DG + E + DP+ + +F
Sbjct: 236 FNPGIRGVGPKTALKIV----KKDGFADMIAEKLPDFDPSPILQF 276
>gi|5679043|gb|AAD46833.1|AF160893_1 GM10765p [Drosophila melanogaster]
gi|28460669|dbj|BAC57447.1| xpg like endonuclease [Drosophila melanogaster]
Length = 726
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
+ + +C+ LL G+ + P EAEA CA++ LVDGV++ DSD F +GA VY+N
Sbjct: 120 NHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFAYGAVRVYRNF 179
Query: 949 --------FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIE 999
V+ Y M++I + ++K+I MALL G DY +GI GIG ++
Sbjct: 180 SVSTQGAQAAAGGAVDIYDMREITSRMDFGQQKIIVMALLCGCDYCPDGIGGIGKDGVLK 239
Query: 1000 VVNAFPEEDGLSKFREW 1016
+ N + E + L + R W
Sbjct: 240 LFNKYKETEILDRMRSW 256
>gi|408397964|gb|EKJ77101.1| hypothetical protein FPSE_02745 [Fusarium pseudograminearum CS3096]
Length = 747
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 12/123 (9%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSV-- 944
++ EM + +LL+ +PY++AP EA+AQ Y+E L++G+++DDSD+ +FGA+ +
Sbjct: 125 ITPEMASALIQLLKKLDIPYVVAPYEADAQLVYLERQGLINGIISDDSDLLVFGAKKLLT 184
Query: 945 ----YKNIFD-DRKYVETYFMQDIEKDL-GLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
Y N + +RK F E L G + + RMA+ G DY +G+ G+G+ A
Sbjct: 185 KLDQYGNCLEINRK----DFCACREVSLTGWSDTEFRRMAIFSGCDYLDGLPGVGLKTAY 240
Query: 999 EVV 1001
++
Sbjct: 241 RML 243
>gi|448531667|ref|XP_003870300.1| Exo1 exodeoxyribonuclease [Candida orthopsilosis Co 90-125]
gi|380354654|emb|CCG24170.1| Exo1 exodeoxyribonuclease [Candida orthopsilosis]
Length = 717
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 884 AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARS 943
A V+S+M L + + Y++AP EA+ Q Y+E +VDG++++DSD+ +FG
Sbjct: 122 AAYVTSQMAKSIMCELDVMNIRYVVAPYEADPQMVYLEKIGIVDGILSEDSDLLIFGCNK 181
Query: 944 VYKNIFDDRKYVETY---F--MQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
+ + DD VE F ++ I T E+L +A+L G DYT+GI G+G+ +A
Sbjct: 182 LITKLKDDSSCVEINRDDFNKVRQIPYLASYTSEQLRLVAMLSGCDYTKGIPGVGLKSAF 241
Query: 999 EVVNAF 1004
++V +
Sbjct: 242 QMVRRY 247
>gi|296804544|ref|XP_002843124.1| DNA-repair protein rad2 [Arthroderma otae CBS 113480]
gi|317374914|sp|C5FZT5.1|FEN1_NANOT RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|238845726|gb|EEQ35388.1| DNA-repair protein rad2 [Arthroderma otae CBS 113480]
Length = 394
Score = 77.8 bits (190), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 29/237 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC+ LL++ G+PYI AP EAEAQCA + V G ++D D
Sbjct: 124 KFSRRTVRVTREHNAECKRLLKLMGIPYIDAPTEAEAQCAVLAKEGKVFGAASEDMDTLC 183
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F A + +++ F +++ +E + + +E LG+ + + + +LLG DY + I +G
Sbjct: 184 FAAPVLLRHLTFSEQRKEPILEIHLDKVLE-GLGMEMTQFVDLCILLGCDYLDPIPKVGP 242
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV------ 1048
A++++ + L K E IES DP K+ + + R + DV
Sbjct: 243 NTALKMIR---DHGTLEKVVETIES-DPK--KKYVIPDDWPYLQARDLFFNPDVRPADAP 296
Query: 1049 ----NYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
+ V G+ F F ED+ +A ++N+K Q RLE F+
Sbjct: 297 ECDFKWTAPDVEGLVRFLVEEKGFSEDRVRNGAARLTKNLK-----SAQQSRLEGFF 348
>gi|320036635|gb|EFW18574.1| flap endonuclease [Coccidioides posadasii str. Silveira]
gi|392864029|gb|EAS35174.2| flap endonuclease 1 [Coccidioides immitis RS]
Length = 395
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 113/236 (47%), Gaps = 27/236 (11%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNEECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + + +++ F +++ ++ ++ + + LG+ R++ + + +LLG DY + I +G
Sbjct: 185 FDSPILLRHLTFSEQRKEPIQEIHLERVLEGLGMDRKQFVDLCILLGCDYVDPIPKVGPN 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNS- 1054
A++++ + L K E +E+ DP K+ + + R + DV A +
Sbjct: 245 TALKMIR---DHGSLEKVVEAMEN-DPK--KKYTIPEDWPYEQARDLFFEPDVRPADHPE 298
Query: 1055 ---------VGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
V G+ +F F ED+ +A +N+K Q RLE F+
Sbjct: 299 CDFKWESPDVEGLVKFLVEGKGFSEDRVRSGAARLQKNLKTA-----QQSRLEGFF 349
>gi|330689555|pdb|3Q8M|A Chain A, Crystal Structure Of Human Flap Endonuclease Fen1 (D181a) In
Complex With Substrate 5'-Flap Dna And K+
gi|330689556|pdb|3Q8M|B Chain B, Crystal Structure Of Human Flap Endonuclease Fen1 (D181a) In
Complex With Substrate 5'-Flap Dna And K+
Length = 341
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF--DD 951
EC+ LL + G+PY+ AP EAEA CA + A V T+D FG+ + +++ +
Sbjct: 139 ECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMACLTFGSPVLMRHLTASEA 198
Query: 952 RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+K ++ + + I ++LGL +E+ + + +LLGSDY E I GIG A++++
Sbjct: 199 KKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIGPKRAVDLIQ 250
>gi|358394562|gb|EHK43955.1| hypothetical protein TRIATDRAFT_319288 [Trichoderma atroviride IMI
206040]
Length = 797
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 84/155 (54%), Gaps = 7/155 (4%)
Query: 853 EATEKILEEEMQILDHEYMYLGDEQKKLE--RNAESVSSEMFAECQELLQMFGLPYIIAP 910
E+ K EE+++I + EY+ G + ++ + ++ EM + + L+ +PY++AP
Sbjct: 90 ESRAKKREEKLKIAN-EYLKAGKSSQAVQEFQKCIDITPEMASALIQELKKMDIPYVVAP 148
Query: 911 MEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETY---FMQDIEKDL 967
EA+AQ Y+E LV G+++DDSD+ +FGA+ + + +E F E L
Sbjct: 149 YEADAQLVYLERMGLVGGILSDDSDLLVFGAKRLLTKLDQYGNCIEINRRDFCACREISL 208
Query: 968 -GLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
G + + RMA++ G DY G+ G+G+ A ++
Sbjct: 209 TGWSDAEFRRMAIMSGCDYLNGLPGVGLKTAYRLL 243
>gi|82231650|sp|Q5I4H3.1|FEN1_XIPMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|57639537|gb|AAW55636.1| flap endonuclease-1 [Xiphophorus maculatus]
gi|57639539|gb|AAW55637.1| flap endonuclease-1 [Xiphophorus maculatus]
Length = 380
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + +C++LL + G+PYI AP EAEA CA + V T+D D
Sbjct: 125 KFSKRLVKVTKQHNDDCKKLLTLMGVPYIEAPCEAEASCAALVKEGKVFATATEDMDGLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K V+ + I +D+GLT E+ I + +LLG DY I GIG
Sbjct: 185 FGTNVLLRHLTASEAKKLPVQEFHFNRILQDIGLTSEQFIDLCILLGCDYCGTIKGIGPK 244
Query: 996 NAIEVV 1001
AI+++
Sbjct: 245 RAIDLI 250
>gi|380015033|ref|XP_003691516.1| PREDICTED: flap endonuclease 1-like [Apis florea]
Length = 383
Score = 77.4 bits (189), Expect = 5e-11, Method: Composition-based stats.
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
++ +K R V+ E E ++LL++ G+PYI AP EAEAQCA M A V T+D
Sbjct: 120 AEDIEKFNRRLVKVTKEHAEEAKQLLKLMGIPYIDAPCEAEAQCAAMVKAGKVFATATED 179
Query: 934 SDVFLFGARSVYKNIF--DDRKYVETYFMQD-IEKDLGLTREKLIRMALLLGSDYTEGIS 990
D FG + + + + RK F QD + + L L+ ++ I + ++LG DYT I
Sbjct: 180 MDALTFGCNILLRRLTFSEARKMPVQEFHQDKVLEGLELSHDEFIDLCIMLGCDYTNSIK 239
Query: 991 GIGIVNAIEVV 1001
G+G AIE++
Sbjct: 240 GVGPKRAIELI 250
>gi|195441676|ref|XP_002068629.1| GK20322 [Drosophila willistoni]
gi|194164714|gb|EDW79615.1| GK20322 [Drosophila willistoni]
Length = 722
Score = 77.4 bits (189), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
+ + +C+ LL G+ + P EAEA CA++ LVDGV++ DSD F +GA VY+N
Sbjct: 121 NHVLKQCENLLISMGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFAYGAVRVYRNF 180
Query: 949 --------FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIE 999
V+ Y M+DI + + K+I MALL G DY +GI GIG ++
Sbjct: 181 SVSTQGAQAAAGGAVDIYDMRDICSRIDFGQNKIIVMALLCGCDYCPDGIGGIGKDGVLK 240
Query: 1000 VVNAFPEEDGLSKFREW 1016
+ N + + + L + R W
Sbjct: 241 LFNKYKDAEILQRLRNW 257
>gi|307173481|gb|EFN64391.1| Flap endonuclease 1-B [Camponotus floridanus]
Length = 382
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E ++LLQ+ G+PYI AP EAEAQCA + A V T+D D
Sbjct: 125 KFSRRLVKVTKNHADEAKQLLQLMGIPYIDAPCEAEAQCAALVKAGKVFATATEDMDALT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + + + + RK V+ M + L L ++ I + ++LG DYT I G+G
Sbjct: 185 FGCDILLRRLTLSEARKLPVQEIHMDKVLTGLELNHDEFIDLCIMLGCDYTGSIKGVGPK 244
Query: 996 NAIEVVNAF 1004
AIE++ +
Sbjct: 245 RAIELIKNY 253
>gi|363806970|ref|NP_001242313.1| flap endonuclease 1 [Glycine max]
gi|317376195|sp|C6TEX6.1|FEN1_SOYBN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|255640175|gb|ACU20378.1| unknown [Glycine max]
Length = 382
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 85/154 (55%), Gaps = 10/154 (6%)
Query: 851 HAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAP 910
AEATE L E ++ + E + +K + V+ + +C+ LL++ G+P + AP
Sbjct: 105 RAEATED-LSEALETANKE------DIEKFSKRTVKVTKQHNDDCKRLLRLMGVPVVEAP 157
Query: 911 MEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFD---DRKYVETYFMQDIEKDL 967
EAEAQCA + A V GVV++D D FGA +++ D + V + + I ++L
Sbjct: 158 SEAEAQCAALCKAGKVYGVVSEDMDSLTFGAPKFLRHLMDPSSKKIPVMEFEVAKILEEL 217
Query: 968 GLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+T ++ I + +L G DY + I GIG + A++++
Sbjct: 218 NMTMDQFIDLCILSGCDYCDSIRGIGGLTALKLI 251
>gi|367003685|ref|XP_003686576.1| hypothetical protein TPHA_0G03010 [Tetrapisispora phaffii CBS 4417]
gi|357524877|emb|CCE64142.1| hypothetical protein TPHA_0G03010 [Tetrapisispora phaffii CBS 4417]
Length = 380
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K E+ VS E E + LL++ G+PY+ AP EAE+QCA + V ++D D
Sbjct: 123 KQEKRLVKVSKEHNDEAKHLLELMGIPYVNAPCEAESQCAELAKKGKVYAAASEDMDTLC 182
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
+ + +++ F + K + + + + L LT E+ I + ++LG DY E I G+G V
Sbjct: 183 YRTPFLLRHLTFSEAKKEPIHEINTETVLEGLELTLEQFIDLGIMLGCDYCESIRGVGPV 242
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPD 1021
A++++ E L K E++ESPD
Sbjct: 243 TALKLIK---EHGSLEKIIEFVESPD 265
>gi|28380019|sp|Q976H6.2|FEN_SULTO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|342306106|dbj|BAK54195.1| flap endonuclease-1 [Sulfolobus tokodaii str. 7]
Length = 351
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 13/142 (9%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E KK + + +++EM E +ELL+ G+P + AP E EA+ AY+ + L + D D
Sbjct: 118 ELKKYAQMSIRLTNEMAEESKELLKAMGIPVVQAPSEGEAEAAYINILGLSWATASQDYD 177
Query: 936 VFLFGARSVYKNIFDDRK--------YVET----YFMQDIEKDLGLTREKLIRMALLLGS 983
LFGA+ + +N+ K YVE + + K LGLTRE+LI + +++G+
Sbjct: 178 SLLFGAKRLIRNLTLSGKRKLPGKDVYVEIKPELIELDTLLKKLGLTREQLIDIGIIVGT 237
Query: 984 DYT-EGISGIGIVNAIEVVNAF 1004
DY +GI G G+ A ++ +
Sbjct: 238 DYNPDGIKGYGVKTAYRIIKKY 259
>gi|302677424|ref|XP_003028395.1| hypothetical protein SCHCODRAFT_83281 [Schizophyllum commune H4-8]
gi|300102083|gb|EFI93492.1| hypothetical protein SCHCODRAFT_83281 [Schizophyllum commune H4-8]
Length = 911
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 73/135 (54%), Gaps = 22/135 (16%)
Query: 878 KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVF 937
K++ +N ++ + M + +++ FG + +AP EAEA+ AY+ ++DGV++DDSD F
Sbjct: 95 KRISKNNHALINGM----KGIVEAFGYEWRMAPGEAEAELAYLNRIGIIDGVLSDDSDNF 150
Query: 938 LFGARSVYKNIF-----------------DDRKYVETYFMQDIEKDLGLTREKLIRMALL 980
LFGA +V +N DD+++ Y + DI L LTR LI + L+
Sbjct: 151 LFGALTVIRNPSNNLSANRAKPVLNSEGRDDKQHTMVYRLADITSQLELTRGGLILIGLM 210
Query: 981 LGSDYTE-GISGIGI 994
G DY + G+ GI
Sbjct: 211 AGGDYEQAGLPDCGI 225
>gi|407851500|gb|EKG05394.1| hypothetical protein TCSYLVIO_003532 [Trypanosoma cruzi]
Length = 393
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K+ + VS E E ++LLQ+ G+P + AP EAEAQCA + N V T+D D
Sbjct: 129 KMSKRTVRVSREQLEEAKKLLQLMGIPVVQAPSEAEAQCAELVKKNKAWAVATEDMDALT 188
Query: 939 FGARSVYKNIF---DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FGA + +++ ++ + + + +I GLT + I + +LLG DY ISGIG
Sbjct: 189 FGAPVMLRHLTYSEAKKRPIAEFHLDEILGITGLTMTQFIDLCILLGCDYVPKISGIGPQ 248
Query: 996 NAIE 999
A E
Sbjct: 249 KAWE 252
>gi|392594781|gb|EIW84105.1| PIN domain-like protein, partial [Coniophora puteana RWD-64-598 SS2]
Length = 242
Score = 77.4 bits (189), Expect = 6e-11, Method: Composition-based stats.
Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 10/126 (7%)
Query: 878 KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVF 937
K +ERN + F L++ FG Y+ AP EAEA+ A M +VD V+T+DSD F
Sbjct: 51 KTVERNVPHYLTNGFCS---LIKAFGFTYLWAPGEAEAELAAMNKYTVVDAVMTNDSDAF 107
Query: 938 LFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVN 996
+FG R + R+ V+ Y + I++ GL+ + L+ +AL+ G DY T G+ G GI
Sbjct: 108 VFGTRRLV------RQLVKVYTVGRIQEKTGLSNDALLLIALVRGGDYDTVGLKGAGIEL 161
Query: 997 AIEVVN 1002
A E+ +
Sbjct: 162 AYEIAS 167
>gi|324509011|gb|ADY43797.1| Flap endonuclease GEN 1 [Ascaris suum]
Length = 534
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 12/120 (10%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVY-------- 945
E + LL G+ ++ + +E EAQCA +E LV G +T D D LFG ++Y
Sbjct: 116 EIKCLLNAMGVRWMASKLEGEAQCAQLERRGLVHGCITRDFDYILFGGNNLYQVEFGPGG 175
Query: 946 KNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIGIVNAIEVVNAF 1004
K+I D+ + M I ++L ++R LI M+L++G DY + GI G+G V A+E+V+ F
Sbjct: 176 KSIHDN---ILLLSMDYIGEELCVSRSCLIAMSLMMGCDYYQKGIPGVGAVTALEIVSEF 232
>gi|324508870|gb|ADY43740.1| Flap endonuclease GEN 1 [Ascaris suum]
Length = 524
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 12/120 (10%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVY-------- 945
E + LL G+ ++ + +E EAQCA +E LV G +T D D LFG ++Y
Sbjct: 116 EIKCLLNAMGVRWMASKLEGEAQCAQLERRGLVHGCITRDFDYILFGGNNLYQVEFGPGG 175
Query: 946 KNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIGIVNAIEVVNAF 1004
K+I D+ + M I ++L ++R LI M+L++G DY + GI G+G V A+E+V+ F
Sbjct: 176 KSIHDN---ILLLSMDYIGEELCVSRSCLIAMSLMMGCDYYQKGIPGVGAVTALEIVSEF 232
>gi|195491935|ref|XP_002093778.1| GE20569 [Drosophila yakuba]
gi|194179879|gb|EDW93490.1| GE20569 [Drosophila yakuba]
Length = 727
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
+ + +C+ LL G+ + P EAEA CA++ LVDGV++ DSD F +GA VY+N
Sbjct: 120 NHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFAYGAIRVYRNF 179
Query: 949 --------FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIE 999
V+ Y M++I + ++K+I MALL G DY +GI GIG ++
Sbjct: 180 SVSTQGAQAAAGGAVDIYDMREITSRMDFGQQKIIVMALLCGCDYCPDGIGGIGKDGVLK 239
Query: 1000 VVNAFPEEDGLSKFREW 1016
+ N + E + L + R W
Sbjct: 240 LFNKYKETEILDRMRSW 256
>gi|88603762|ref|YP_503940.1| flap endonuclease-1 [Methanospirillum hungatei JF-1]
gi|121721338|sp|Q2FNC9.1|FEN_METHJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|88189224|gb|ABD42221.1| flap endonuclease 1 [Methanospirillum hungatei JF-1]
Length = 333
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 10/121 (8%)
Query: 883 NAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGAR 942
++ ++ + + + ++L+Q+ GLP + AP E EAQ AYM L D VV+ D D LFG
Sbjct: 124 SSTAIDAYILSSARQLIQLMGLPVVDAPSEGEAQGAYMVLKGDADYVVSQDYDTLLFGTP 183
Query: 943 SVYKNI-------FDDRKYV---ETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ +N+ R+ E + D+ L +TRE+LI +A+L G+D+ GI GI
Sbjct: 184 VLVRNLTISGKRRLHGRQITVQPERIVLSDVLSTLDITREQLIEIAILTGTDFNPGIRGI 243
Query: 993 G 993
G
Sbjct: 244 G 244
>gi|46125331|ref|XP_387219.1| hypothetical protein FG07043.1 [Gibberella zeae PH-1]
Length = 747
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 12/123 (9%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSV-- 944
++ EM + +LL+ +PY++AP EA+AQ Y+E L++G+++DDSD+ +FGA+ +
Sbjct: 125 ITPEMASALIQLLKKLDIPYVVAPYEADAQLVYLERQGLINGIISDDSDLLVFGAKKLLT 184
Query: 945 ----YKNIFD-DRKYVETYFMQDIEKDL-GLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
Y N + +RK F E L G + + RMA+ G DY +G+ G+G+ A
Sbjct: 185 KLDQYGNCLEINRK----DFCACREVSLTGWSDTEFRRMAIFSGCDYLDGLPGVGLKTAY 240
Query: 999 EVV 1001
++
Sbjct: 241 RML 243
>gi|84489880|ref|YP_448112.1| flap endonuclease-1 [Methanosphaera stadtmanae DSM 3091]
gi|121717163|sp|Q2NFD4.1|FEN_METST RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|84373199|gb|ABC57469.1| flap structure-specific endonuclease [Methanosphaera stadtmanae DSM
3091]
Length = 328
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ E+ ++LL + G+PY+ A E EAQ +YM N VV+ D D FGA + +
Sbjct: 127 LNKEIIKSSKKLLDLMGIPYVQARTEGEAQASYMVSQNDAWAVVSQDYDCLQFGATRMIR 186
Query: 947 NI---FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNA 1003
N+ + K +E ++ K+L LTRE+L+ +A+L+G+D+ +G+ GIG I++++
Sbjct: 187 NLKLSKSNSKNLELISLEKTLKELNLTREQLVDVAMLVGTDFNKGVYGIGAKKGIKLIHK 246
Query: 1004 F 1004
+
Sbjct: 247 Y 247
>gi|395646325|ref|ZP_10434185.1| Flap structure-specific endonuclease [Methanofollis liminatans DSM
4140]
gi|395443065|gb|EJG07822.1| Flap structure-specific endonuclease [Methanofollis liminatans DSM
4140]
Length = 333
Score = 77.4 bits (189), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 17/158 (10%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E K R + + M A + LL + G+P+++AP E EAQ A+M V + D
Sbjct: 116 EEAYKQARASTRIDDAMIASSKRLLDLMGIPWMVAPSEGEAQAAFMARQGDVGAAASQDY 175
Query: 935 DVFLFGARSVYKNI-FDDRKYV---------ETYFMQDIEKDLGLTREKLIRMALLLGSD 984
D LFGA + +N+ ++ V E + + LGL+RE+L+ + +L+G+D
Sbjct: 176 DALLFGAPRLVRNLTVSGKRKVRGRSVTVRPERIDLAAVLAGLGLSREELVEIGILIGTD 235
Query: 985 YTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDP 1022
+ GI G+G A+++V KF+E ++ P
Sbjct: 236 FNPGIRGVGAKTALKIVRG-------GKFQETVQEKAP 266
>gi|20094004|ref|NP_613851.1| flap endonuclease-1 [Methanopyrus kandleri AV19]
gi|28380017|sp|Q8TXU4.1|FEN_METKA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|19886972|gb|AAM01781.1| 5'-3' exonuclease [Methanopyrus kandleri AV19]
Length = 348
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 14/156 (8%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E++K R + + + + LL + G+P++ AP E EAQCAYM V + D
Sbjct: 112 EEREKYARQVARLDESLVEDAKRLLDLMGIPWVQAPSEGEAQCAYMARCGDVWATGSQDY 171
Query: 935 DVFLFGARSVYKN--IFDDRKYVET----------YFMQDIEKDLGL-TREKLIRMALLL 981
D LFG+ + +N I RK+ T ++D+ LGL +RE+L+ +A+LL
Sbjct: 172 DSLLFGSPRLVRNITIVGKRKHPHTGEIIEVKPEIMRLEDVLDQLGLESREQLVDLAILL 231
Query: 982 GSDYT-EGISGIGIVNAIEVVNAFPEEDGLSKFREW 1016
G+DY +G+ GIG A++++ + D L W
Sbjct: 232 GTDYNPDGVPGIGPKRALQLIRKYGSLDELKDTDIW 267
>gi|409079272|gb|EKM79634.1| hypothetical protein AGABI1DRAFT_114134 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 423
Score = 77.4 bits (189), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E KL R V+ E AEC LL++ G+P ++AP EAEAQCA + V ++D
Sbjct: 122 EEVDKLSRRTVKVTKEHNAECIRLLKLMGIPVVVAPSEAEAQCAELARGGKVYAAGSEDM 181
Query: 935 DVFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D F A +Y+++ F + K + ++ K L + + I + +LLG DY E I G
Sbjct: 182 DTLTFNAPILYRHLTFSEAKKQPISEINLEAALKGLEMNMSQFIDLCILLGCDYLEPIRG 241
Query: 992 IGIVNAIEVVNAF 1004
+G +A++++ +
Sbjct: 242 VGPKSALKLIREY 254
>gi|401841744|gb|EJT44085.1| RAD27-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 380
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER VS E E Q+LL + G+PYIIAP EAEAQCA + V ++D D
Sbjct: 120 EKMKQERRLVKVSKEHNEEAQKLLGLMGVPYIIAPTEAEAQCAELAKKGKVYAAASEDMD 179
Query: 936 VFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ F + K + + + + L LT E+ + + ++LG DY E I G+
Sbjct: 180 TLCYRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQFVDLCIMLGCDYCESIRGV 239
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIES 1019
G V A++++ + K E+IES
Sbjct: 240 GPVTALKLMRT---HGSIEKIIEFIES 263
>gi|402080846|gb|EJT75991.1| DNA-repair protein rad2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 394
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 20/237 (8%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R V+ E EC+ LL++ G+PYI+AP EAEAQCA + A V ++D
Sbjct: 120 AEEVEKFSRRTVHVTREHNEECRRLLKLMGIPYIVAPTEAEAQCAALARAGKVFAAASED 179
Query: 934 SDVFLFGARSVYKNIFDDRKYVETYFMQDIEK---DLGLTREKLIRMALLLGSDYTEGIS 990
D F + + +++ + E ++K L + R++ + + +LLG DY + I
Sbjct: 180 MDTLCFDSPVLLRHLTFSEQRKEPILEIHVDKVLEGLNMERKQFVDLCILLGCDYLDPIP 239
Query: 991 GIGIVNAIEVVNAFPEEDGLSKFREWIESPD-----PTILGKFDVQTGASSRKRRSSDG- 1044
+G A++++ E L E ++ D P D + + R +D
Sbjct: 240 KVGPTTALKLIR---EHGSLETIVEKMKKGDLKYTVPDDWPFEDARDLFFNPDVRPADHP 296
Query: 1045 DKDVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
D D + K + G+ F + F ED+ +A +N+K Q RLE F+
Sbjct: 297 DCDFKWEKPDIDGLINFLVTEKGFSEDRVRSGAARLEKNLK-----TSQQQRLEGFF 348
>gi|195337621|ref|XP_002035427.1| GM13928 [Drosophila sechellia]
gi|194128520|gb|EDW50563.1| GM13928 [Drosophila sechellia]
Length = 726
Score = 77.4 bits (189), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 74/137 (54%), Gaps = 9/137 (6%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 948
+ + +C+ LL G+ + P EAEA CA++ LVDGV++ DSD F +GA VY+N
Sbjct: 120 NHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFAYGAVRVYRNF 179
Query: 949 --------FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIE 999
V+ Y M++I + ++K+I MALL G DY +GI GIG ++
Sbjct: 180 SVSTQGAQAAAGGAVDIYDMREITSRMDFGQQKIIVMALLCGCDYCPDGIGGIGKDGVLK 239
Query: 1000 VVNAFPEEDGLSKFREW 1016
+ N + E + L + R W
Sbjct: 240 LFNKYKETEILDRMRSW 256
>gi|299742153|ref|XP_001832288.2| exodeoxyribonuclease 1 [Coprinopsis cinerea okayama7#130]
gi|298405054|gb|EAU89661.2| exodeoxyribonuclease 1 [Coprinopsis cinerea okayama7#130]
Length = 895
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 19/140 (13%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
V+ +M + + L+ G+ Y++AP EA+AQ AY+E LVDG++T+DSD+ +FG +SV+
Sbjct: 125 VTPQMAYQLIKKLRAEGVQYLVAPYEADAQLAYLERIGLVDGILTEDSDLLVFGCKSVFF 184
Query: 947 NIFDDRKYVETYFMQDIE-KDL-------------GLTREKLIRMALLLGSDYTEGISGI 992
FD Y + IE KD G T + MA+L G DY I GI
Sbjct: 185 K-FDSTNYT----VVSIERKDFASVVPPRSDIHLAGWTDVQFRSMAILSGCDYLPSIPGI 239
Query: 993 GIVNAIEVVNAFPEEDGLSK 1012
G+ A ++ + + + K
Sbjct: 240 GLKTACNLLRKYKTAEAVVK 259
>gi|346327520|gb|EGX97116.1| flap structure-specific endonuclease [Cordyceps militaris CM01]
Length = 770
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 870 YMYLGDEQKKLERNAESVSSEMFAECQ--ELLQMFGLPYIIAPMEAEAQCAYMELANLVD 927
+++ G + +RN S + A Q L+++FGLP + AP EAEA+CA ++ +VD
Sbjct: 76 FIFDGPNKPTTKRNKRSGRGDGVANSQAKRLIRLFGLPALDAPGEAEAECALLQRHGIVD 135
Query: 928 GVVTDDSDVFLFGARSVYKNIFDDRK------YVETYFMQDIEKDLGLTREKLIRMALLL 981
V+++D D +FG +N + K +V Y + + GL R+ ++ +AL+
Sbjct: 136 AVLSEDVDTIMFGCTKTLRNWSSEGKTSTAPTHVSLYDTAAVA-NHGLGRQGMVLVALMS 194
Query: 982 GSDY-TEGISGIGIVNAIEVVNA 1003
G DY +GI G G+ A E NA
Sbjct: 195 GGDYLPDGIPGCGVKVACEAANA 217
>gi|302652986|ref|XP_003018331.1| hypothetical protein TRV_07676 [Trichophyton verrucosum HKI 0517]
gi|291181960|gb|EFE37686.1| hypothetical protein TRV_07676 [Trichophyton verrucosum HKI 0517]
Length = 376
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC+ LL + G+PY+ AP EAEAQCA + A V G ++D D
Sbjct: 106 KFSRRTVRVTKEHNAECKRLLGLMGIPYLDAPTEAEAQCAVLAKAGKVFGAASEDMDTLC 165
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F A + +++ F +++ +E + + +E LG+ + + + +LLG DY + I +G
Sbjct: 166 FAAPVLLRHLTFSEQRKEPILEIHLDKVLE-GLGMDMTQFVDLCILLGCDYLDPIPKVGP 224
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV------ 1048
A++++ + L K E I+S DP K+ + + R + DV
Sbjct: 225 NTALKMIR---DHGTLEKVVEAIQS-DPK--KKYVIPDDWPYLQARELFFNPDVRPADAP 278
Query: 1049 ----NYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
++ V G+ F F ED+ +A ++N+K Q RLE F+
Sbjct: 279 ECDFKWSAPDVEGLVRFLVEEKGFSEDRVRNGAARLTKNLK-----SAQQSRLEGFF 330
>gi|124505315|ref|XP_001351399.1| flap endonuclease 1 [Plasmodium falciparum 3D7]
gi|74876406|sp|Q7K734.1|FEN1_PLAF7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|11559508|gb|AAG37989.1|AF093702_1 flap endonuclease 1 [Plasmodium falciparum]
gi|6562723|emb|CAB62862.1| flap endonuclease 1 [Plasmodium falciparum 3D7]
Length = 672
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
V+ + E ++LL + G+P I AP EAE+QCA++ NL T+D+D +FG + + +
Sbjct: 135 VTRKQNEEAKKLLTLMGIPIIEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIR 194
Query: 947 NI-------------FDDRKYVETYF-MQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
N+ R Y+ T ++ + K L LT ++ I +L G DY + I GI
Sbjct: 195 NLNANATSNQNKNKNNSKRGYILTEINLEQVLKGLNLTMDEFIDFCILCGCDYCDTIKGI 254
Query: 993 GIVNAIEVVNAF 1004
G A ++ +
Sbjct: 255 GSKTAYNLIKEY 266
>gi|426196176|gb|EKV46105.1| hypothetical protein AGABI2DRAFT_193982 [Agaricus bisporus var.
bisporus H97]
Length = 429
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E KL R V+ E AEC LL++ G+P ++AP EAEAQCA + V ++D
Sbjct: 122 EEVDKLSRRTVKVTKEHNAECIRLLKLMGIPVVVAPSEAEAQCAELARGGKVYAAGSEDM 181
Query: 935 DVFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D F A +Y+++ F + K + ++ K L + + I + +LLG DY E I G
Sbjct: 182 DTLTFNAPILYRHLTFSEAKKQPISEINLEVALKGLEMNMSQFIDLCILLGCDYLEPIRG 241
Query: 992 IGIVNAIEVVNAF 1004
+G +A++++ +
Sbjct: 242 VGPKSALKLIREY 254
>gi|390361636|ref|XP_793916.3| PREDICTED: flap endonuclease GEN homolog 1-like [Strongylocentrotus
purpuratus]
Length = 234
Score = 77.0 bits (188), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 925 LVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSD 984
+VDG +T+D D FL+GAR VY+N+ V+ Y M DIE L L R +L+ +A+LLG D
Sbjct: 123 IVDGCMTEDGDAFLYGARIVYRNLNMATGKVDCYRMDDIETKLDLDRRRLVALAILLGCD 182
Query: 985 Y-TEGISGIGIVNAIEVVNAFPEE-DGLSKFREWIESPDPTIL 1025
Y +G+ G+G A+ + + P D L+ F++W D T L
Sbjct: 183 YLPKGVPGVGKEVAMRFMKSLPSSVDPLNLFQDWRGGCDSTCL 225
>gi|68478167|ref|XP_716825.1| hypothetical protein CaO19.8541 [Candida albicans SC5314]
gi|68478288|ref|XP_716765.1| hypothetical protein CaO19.926 [Candida albicans SC5314]
gi|46438448|gb|EAK97778.1| hypothetical protein CaO19.926 [Candida albicans SC5314]
gi|46438510|gb|EAK97839.1| hypothetical protein CaO19.8541 [Candida albicans SC5314]
Length = 699
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 5/126 (3%)
Query: 884 AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARS 943
A V+S+M L + YI+AP EA+ Q Y+E +VDG++++DSD+ +FG +
Sbjct: 122 AAYVTSQMAKSVMCELDNLSIKYIVAPYEADPQMVYLEKMGIVDGILSEDSDLLIFGCKK 181
Query: 944 VYKNIFDDRKYVET---YF--MQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
+ + DD VE F +++I E+L +A+L G DYT+G+ GIG+ A
Sbjct: 182 LITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVAMLSGCDYTKGVPGIGLKTAF 241
Query: 999 EVVNAF 1004
++V +
Sbjct: 242 QLVRKY 247
>gi|403162368|ref|XP_003322600.2| flap endonuclease 1-A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172578|gb|EFP78181.2| flap endonuclease 1-A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 387
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 19/230 (8%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
KL R V+ E EC+ LL + G+P+++AP EAEAQCA + LV G ++D D
Sbjct: 126 KLSRRTVKVTREHNEECRRLLTLMGIPWVVAPSEAEAQCAELCRGGLVYGAGSEDMDTLT 185
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ F + RK + T ++ + L LT E+ I +L G DY + + G+
Sbjct: 186 FGTPILLRHLTFSEARKMPILTVNLEKVLSGLELTMEQFIEFCVLCGCDYVDPLKGVAAK 245
Query: 996 NAIEVVNAFPEEDGLSK----FREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYA 1051
A +++ E L K RE ++P P ++ + + + + +
Sbjct: 246 TAHKLMM---EHGSLEKVVEHLRESSKNPPPEDW-PWEEARALFQKPEVTPSSELKLEWK 301
Query: 1052 KNSVGGVSEFDESISQFDED---KQSAEYSQNMKKIFMDKHTQLRLEAFY 1098
K V G+ +F FDE+ K +A+ +Q M + Q RL+ F+
Sbjct: 302 KPDVEGLVDFLVKEKGFDEERVKKGAAKLTQA-----MTQKQQGRLDGFF 346
>gi|238882475|gb|EEQ46113.1| hypothetical protein CAWG_04457 [Candida albicans WO-1]
Length = 699
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 9/142 (6%)
Query: 872 YLGDEQKKLERN----AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 927
Y+ +KL A V+S+M L + YI+AP EA+ Q Y+E +VD
Sbjct: 106 YIAANNRKLAYKQFMKAAYVTSQMAKSVMCELDNLSIKYIVAPYEADPQMVYLEKMGIVD 165
Query: 928 GVVTDDSDVFLFGARSVYKNIFDDRKYVET---YF--MQDIEKDLGLTREKLIRMALLLG 982
G++++DSD+ +FG + + + DD VE F +++I E+L +A+L G
Sbjct: 166 GILSEDSDLLIFGCKKLITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVAMLSG 225
Query: 983 SDYTEGISGIGIVNAIEVVNAF 1004
DYT+G+ GIG+ A ++V +
Sbjct: 226 CDYTKGVPGIGLKTAFQLVRKY 247
>gi|426193684|gb|EKV43617.1| hypothetical protein AGABI2DRAFT_48292, partial [Agaricus bisporus
var. bisporus H97]
Length = 528
Score = 77.0 bits (188), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 19/129 (14%)
Query: 888 SSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKN 947
++++ + +++ FG + AP EAEA+ AY+ ++DG+++DD D FLFGA +V +N
Sbjct: 101 TNKLITGMKTIVEAFGFEWRTAPGEAEAELAYLNRIGVIDGILSDDVDNFLFGALTVIRN 160
Query: 948 IF-----------------DDRKYVETYFMQDIE--KDLGLTREKLIRMALLLGSDYTEG 988
DD+ + + +QDI+ +D+ L+R LI + LL G DY EG
Sbjct: 161 QSNNLSGNKSNPVVNSEGKDDKNHTRVFHLQDIQNHEDIQLSRGGLILIGLLSGGDYEEG 220
Query: 989 ISGIGIVNA 997
+ G+V A
Sbjct: 221 LRKCGMVTA 229
>gi|440797493|gb|ELR18579.1| XPG Iregion domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 434
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 9/170 (5%)
Query: 856 EKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEA 915
E+ LEE ++ D E M +KLE+ V+ + EC++LL++ G+P + AP EAEA
Sbjct: 73 EQGLEEATELGDTETM------RKLEKRTVHVTPKHNEECKKLLRLMGIPVVEAPTEAEA 126
Query: 916 QCAYMELANLVDGVVTDDSDVFLFGARSVYKNIF---DDRKYVETYFMQDIEKDLGLTRE 972
QCA + A V ++D D F + +++ +K + ++ + K G+T E
Sbjct: 127 QCAELCRAGKVFATGSEDMDSLTFATPILLRHLNYAEAQKKPIIEIDLEKVLKGFGMTME 186
Query: 973 KLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDP 1022
+ I + +L G DY + I GIG A+E++ + +G K + + P P
Sbjct: 187 QFIDLCILAGCDYCDTIRGIGPKRALEMIRKYGSIEGTLKNLDKAKYPLP 236
>gi|453086627|gb|EMF14669.1| hypothetical protein SEPMUDRAFT_63272 [Mycosphaerella populorum
SO2202]
Length = 788
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 895 CQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK- 953
+ELL+ FG P+ +AP EAEA+CA ++ +VD V+++D D +FG+ +++N + K
Sbjct: 107 AKELLRKFGFPWHVAPGEAEAECALLQREGVVDAVLSEDVDTLMFGSGVLWRNWTAEGKG 166
Query: 954 ----YVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIG 993
+ Y + +++ GL +E ++ +AL+ G DY EGI G G
Sbjct: 167 KVPTHCSVYNAKAVKEKSGLDKEGMVLVALMSGGDYIVEGIPGCG 211
>gi|358379429|gb|EHK17109.1| hypothetical protein TRIVIDRAFT_195114 [Trichoderma virens Gv29-8]
Length = 787
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 9/143 (6%)
Query: 870 YMYLGDEQKKLERNAESVSSEMFA--ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 927
+++ G + K +R+ S + FA + L+++FG AP EAEA+CA+++ +VD
Sbjct: 76 FVFDGPNKPKFKRHRRSGRGDGFAAAHAKRLIRLFGFVVHDAPGEAEAECAFLQKNGIVD 135
Query: 928 GVVTDDSDVFLFGARSVYKNIFDDRK-----YVETYFMQDIE-KDLGLTREKLIRMALLL 981
V+++D D +FG +N + K +V Y ++D+ +LGL RE ++ +AL+
Sbjct: 136 AVLSEDVDTIMFGCTRTLRNWSAEGKAGKPTHVSMYDVEDLNMANLGLDREGMVLVALMS 195
Query: 982 GSDYT-EGISGIGIVNAIEVVNA 1003
G DY EG+ G G A E A
Sbjct: 196 GGDYIPEGVPGCGPKVACEAAKA 218
>gi|340624624|ref|YP_004743077.1| flap endonuclease-1 [Methanococcus maripaludis X1]
gi|339904892|gb|AEK20334.1| flap endonuclease-1 [Methanococcus maripaludis X1]
Length = 324
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 7/156 (4%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + A + + ++LL++ G+PY+ AP E EAQCA + AN V++ D
Sbjct: 115 EEMQKYAKRANFLDRKTVDNSKKLLELMGIPYVNAPSEGEAQCAELVKANNAFCVISQDY 174
Query: 935 DVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIG 993
D L+GA V KNI K +E ++ L ++ ++LI A+L+G+DY G+ G G
Sbjct: 175 DSILYGADYVVKNITSSNKDIELIELEKTLSGLNISCDQLIDAAILIGTDYNPGGLKGFG 234
Query: 994 IVNAIEVV------NAFPEEDGLSKFREWIESPDPT 1023
AI+ V N E + S+ R+ + P+ T
Sbjct: 235 PKKAIDTVKKGKMENYISEIENYSEIRKIFDEPNVT 270
>gi|225685184|gb|EEH23468.1| DNA-repair protein rad2 [Paracoccidioides brasiliensis Pb03]
Length = 359
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 29/237 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 89 KFSRRTVRVTREHNEECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLC 148
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F + + +++ F +++ +E + + +E L + R++ + + +LLG DY + I IG
Sbjct: 149 FDSPILLRHLTFSEQRKEPILEIHLDRVLE-GLDMDRKQFVDLCILLGCDYLDPIPKIGP 207
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK----------RRSSDG 1044
A++++ + L K E IES DP K+ + + R++
Sbjct: 208 NTALKLIR---DHGSLEKVVEAIES-DPK--KKYVIPEDWPYKDARELFFDPDVRKADHP 261
Query: 1045 DKDVNYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEAFY 1098
D D + V G+ +F F ED+ +A +N+K Q RLE F+
Sbjct: 262 DCDFKWEAPDVEGLVKFLVEEKAFSEDRVRNAAARLQKNLKTA-----QQSRLEGFF 313
>gi|406860923|gb|EKD13979.1| hypothetical protein MBM_07656 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1010
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 45/190 (23%)
Query: 857 KILEEEMQILDHEYMYLGDEQKKLERNAE-----SVSSEMFAECQELLQMFGLPYIIAPM 911
++L +Q L +++ G ++ +L+RN + +S+M A ++LL++FG P AP
Sbjct: 66 RLLSLSIQPL---FVFDGPQRPQLKRNKRVGRGGASASDMAA--KQLLKLFGFPCHNAPG 120
Query: 912 EAEAQCAYMELANLVDGVVTDDSDVFLF------------GAR----SVYKNIFDDRKYV 955
EAEA+CA ++ +VD V+++D D +F GAR + ++FD +K
Sbjct: 121 EAEAECALLQRKGIVDAVLSEDVDTLMFGSGITLRDWSSEGARGSKAPTHVSLFDAKK-- 178
Query: 956 ETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIGIVNAIEVVNA----------F 1004
E GL RE +I +ALL G DY T+G+ GIGI A + A
Sbjct: 179 ------TKEGSSGLDREGMILVALLSGGDYNTDGLPGIGIKVACQAARAGFGKELCGLSR 232
Query: 1005 PEEDGLSKFR 1014
+EDGL+ +R
Sbjct: 233 SDEDGLATWR 242
>gi|159118360|ref|XP_001709399.1| Flap structure-specific endonuclease [Giardia lamblia ATCC 50803]
gi|317374902|sp|A8B672.1|FEN1_GIAIC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|157437515|gb|EDO81725.1| Flap structure-specific endonuclease [Giardia lamblia ATCC 50803]
Length = 361
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
Query: 878 KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVF 937
K+L R V+ + + + LL G+PY++A EAEAQC M + +GV + D DV
Sbjct: 125 KQLSRRTVKVTQQHCKQAERLLDTLGIPYVVAAGEAEAQCVAMAKERVCEGVASSDLDVL 184
Query: 938 LFGARSVYKNIFD--DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +N+ DR+ VE + + K+LG + ++ + + +L G DY + GIG
Sbjct: 185 AFGSPCLIRNLAQGGDREIVEIN-LNTVLKELGFSYDEFLDLCILCGCDYANSLEGIGPK 243
Query: 996 NAIEVV 1001
A +++
Sbjct: 244 TAYKLI 249
>gi|407922590|gb|EKG15687.1| DNA repair protein [Macrophomina phaseolina MS6]
Length = 691
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 126/276 (45%), Gaps = 55/276 (19%)
Query: 870 YMYLGDEQKKLERNAES---VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+++ G + +RN + V+S ++LL+ FG P+ IAP EAEA+CA ++ +V
Sbjct: 76 FVFDGPNKPPFKRNKRTGPNVASIPEFLAKQLLKQFGFPFHIAPGEAEAECALLQREGIV 135
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRK------YVETYFMQDIEKDL-GLTREKLIRMAL 979
D V+++D D +FG+R +N ++K +V Y + GL RE +I +AL
Sbjct: 136 DVVLSEDVDTLMFGSRITLRNWSPEQKSSKVPTHVNVYDAGKTKSGPSGLDREGMILVAL 195
Query: 980 LLGSDYT-EGISGIGIVNAIEV--------VNAFPEED--GLSKFREWI----------- 1017
+ G DY EGI G G A E + A ++D L +RE +
Sbjct: 196 MSGGDYLPEGIPGCGPKTACEAARAGFGHRLCAIKKKDTAALQAWREDLARELRTNESKF 255
Query: 1018 ------------ESPDPTILGKFDVQTGASS-----RKRRSSDGDKDVNYAKNSVGGVSE 1060
+ P ILG + V SS R +R+ D+D+N+A G+
Sbjct: 256 FKRKHGTLSVPEDFPRADILGYY-VSPAISSPEALERLKRNLRWDQDLNFA-----GLRT 309
Query: 1061 FDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEA 1096
F ++ + + ++ +N+ + +H ++R +A
Sbjct: 310 FTADAFEWVKVTGAKKFIRNLAPALLVRHLRMRGQA 345
>gi|159040632|ref|YP_001539884.1| flap endonuclease-1 [Caldivirga maquilingensis IC-167]
gi|189044441|sp|A8M9L3.1|FEN_CALMQ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|157919467|gb|ABW00894.1| XPG I [Caldivirga maquilingensis IC-167]
Length = 350
Score = 77.0 bits (188), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 79/149 (53%), Gaps = 14/149 (9%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +K + A ++S+M E + LL G+P++ AP E EAQ AYM +V + D D
Sbjct: 120 EARKYAQRALFITSDMVDEAKRLLDSMGVPWVQAPSEGEAQAAYMASKGIVWAAGSQDYD 179
Query: 936 VFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLT-REKLIRMALLLG 982
FLFGA + +N I RK YVE + D+ K L L R +LI +A+LLG
Sbjct: 180 SFLFGAPRLVRNLTISGRRKLPGRDEYVEVTPELIELNDVLKALRLRDRGQLIDLAILLG 239
Query: 983 SDYT-EGISGIGIVNAIEVVNAFPEEDGL 1010
+DY EGI GIG A+ ++ + D L
Sbjct: 240 TDYNPEGIPGIGPQRALRLIQEYGSLDKL 268
>gi|409075870|gb|EKM76246.1| hypothetical protein AGABI1DRAFT_9336, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 528
Score = 77.0 bits (188), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 19/129 (14%)
Query: 888 SSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKN 947
++++ + +++ FG + AP EAEA+ AY+ ++DG+++DD D FLFGA +V +N
Sbjct: 101 TNKLITGMKTIVEAFGFEWRTAPGEAEAELAYLNRIGVIDGILSDDVDNFLFGALTVIRN 160
Query: 948 IF-----------------DDRKYVETYFMQDIE--KDLGLTREKLIRMALLLGSDYTEG 988
DD+ + + +QDI+ +D+ L+R LI + LL G DY EG
Sbjct: 161 QSNNLSGNKSNPVVNSEGKDDKNHTRVFRLQDIQDHEDIQLSRGGLILIGLLSGGDYEEG 220
Query: 989 ISGIGIVNA 997
+ G+V A
Sbjct: 221 LRKCGMVTA 229
>gi|50309395|ref|XP_454705.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643840|emb|CAG99792.1| KLLA0E16743p [Kluyveromyces lactis]
Length = 671
Score = 76.6 bits (187), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Query: 886 SVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVY 945
S++ +M E LQM +PY++AP EA+AQ Y+E LV G++++DSD+ +FG +
Sbjct: 124 SITPDMAKCVIEYLQMNSIPYVVAPYEADAQMVYLEKQGLVQGIISEDSDLLVFGCTRLI 183
Query: 946 KNIFDDRKYVET---YFMQDIEKDL---GLTREKLIRMALLLGSDYTEGISGIGIVNAIE 999
+ D+ + +E F + E LT ++L + L G DYT GI +G+V A++
Sbjct: 184 TKLNDNAECIEIDRRNFERLNEGKFPLSKLTEDQLRSLVCLSGCDYTSGIPKVGLVTAMK 243
Query: 1000 VV 1001
V
Sbjct: 244 YV 245
>gi|207343574|gb|EDZ71001.1| YKL113Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 261
Score = 76.6 bits (187), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K ER VS E E Q+LL + G+PYIIAP EAEAQCA + V ++D D
Sbjct: 2 KQERRLVKVSKEHNEEAQKLLGLMGIPYIIAPTEAEAQCAELAKKGKVYAAASEDMDTLC 61
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
+ + +++ F + K + + + + L LT E+ + + ++LG DY E I G+G V
Sbjct: 62 YRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQFVDLCIMLGCDYCESIRGVGPV 121
Query: 996 NAIEVVNAFPEEDGLSKFREWIES 1019
A++++ + K E+IES
Sbjct: 122 TALKLIKT---HGSIEKIVEFIES 142
>gi|443897892|dbj|GAC75231.1| 5'-3' exonuclease [Pseudozyma antarctica T-34]
Length = 730
Score = 76.6 bits (187), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ EM + ++L+ +PY++AP EA+AQ A++E ++DG++T+DSD+ +FG ++V
Sbjct: 125 ITPEMAFQLIKVLKQQDIPYVVAPYEADAQLAFLEAEGIIDGIITEDSDLLVFGCKTVLF 184
Query: 947 NIFDDRKYVETY---FMQDIEKDL-GLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVN 1002
+ +E F + + L G T + +MA+L G DY I G+G+ NA ++
Sbjct: 185 KLDQAGNAIEMLQQRFWTNRQLALSGWTAVEFRQMAILSGCDYLPSIVGMGLKNAHRLLR 244
Query: 1003 AF 1004
+
Sbjct: 245 RY 246
>gi|302415469|ref|XP_003005566.1| DNA-repair protein rad2 [Verticillium albo-atrum VaMs.102]
gi|261354982|gb|EEY17410.1| DNA-repair protein rad2 [Verticillium albo-atrum VaMs.102]
Length = 308
Score = 76.6 bits (187), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ+LL++ G+P+IIAP EAEAQCA + V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQKLLRLMGVPFIIAPTEAEAQCAVLAKGGKVYAAASEDMDTLT 184
Query: 939 FGARSVYKNIF--DDRK-YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ + RK ++ + + + LG+ R + + + +LLG DY + + +G
Sbjct: 185 FETPILLRHLTYSEQRKEPIQEIHLDKVMEGLGMERNQFVDLCILLGCDYLDPVPKVGPS 244
Query: 996 NAIEVVNAFPEEDGLSKF 1013
A++++ +G+ +
Sbjct: 245 TALKLIREHKTLEGVVDY 262
>gi|424811751|ref|ZP_18236997.1| flap structure-specific endonuclease [Candidatus Nanosalinarum sp.
J07AB56]
gi|339757159|gb|EGQ40741.1| flap structure-specific endonuclease [Candidatus Nanosalinarum sp.
J07AB56]
Length = 340
Score = 76.6 bits (187), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 12/127 (9%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
V+ +M E +ELL G+PY+ AP E EAQ A M V GV + D D LFGA + K
Sbjct: 127 VTGDMIDESRELLDAMGVPYVDAPSEGEAQAARMAANGNVYGVGSQDWDSLLFGAERMVK 186
Query: 947 NIFDDRKY-----------VETYFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGI 994
N+ +K E ++ + +LGL+R +L+ M +L+G+D+ +GI G+G
Sbjct: 187 NLTSRKKRSNRDGSSRTISTELIRLEHVLDNLGLSRRELVWMGMLVGTDFNPDGIYGVGP 246
Query: 995 VNAIEVV 1001
A+++V
Sbjct: 247 KTALKLV 253
>gi|198417766|ref|XP_002129714.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 380
Score = 76.6 bits (187), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 127/265 (47%), Gaps = 35/265 (13%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E +C++LL++ G+P + AP EAEAQCA + + V T+D D
Sbjct: 125 KYSRRLVKVTREHMDDCKKLLRLMGIPVVEAPTEAEAQCASLVKSGKVYATATEDMDALT 184
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + + +++ F + RK ++ + + + +++ +T E+ + + +LLG DY E I G+G
Sbjct: 185 FHSSRLLRHLTFSEARKMPIQEFVYEKVLEEMEMTHEQFVDLCILLGCDYCEHIRGVGPK 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRR--------SSDGDKD 1047
A +++ + D E +++ D L K+ V G + R ++ D +
Sbjct: 245 RAYDLIKQYRSID------EILKNID---LKKYTVPDGWVYKDARQLFLAPDVAASEDVE 295
Query: 1048 VNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMD--KHTQLRLEAFYTF----- 1100
+ + G+ +F F+ED+ + +KKI + K TQ RL+ F+
Sbjct: 296 LKWNDPDEEGIVKFMVEEKGFNEDRVRS----GIKKILQNRQKSTQGRLDDFFKVLPSTP 351
Query: 1101 ----NERFAKIRSKRIKKAVKGITG 1121
+ KI+S+ KK KG +G
Sbjct: 352 KTKKRKSDTKIKSESAKKRAKGGSG 376
>gi|320590957|gb|EFX03398.1| DNA-repair protein rad2 [Grosmannia clavigera kw1407]
Length = 856
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 115/244 (47%), Gaps = 43/244 (17%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E ECQ LL++ G+P+I+AP EAEAQCA + A V ++D D
Sbjct: 587 KFSRRTVRVTREHNTECQRLLKLMGIPFIVAPTEAEAQCAELARAGKVYAAASEDMDTLC 646
Query: 939 FGARSVYKNIFDDRKYVETYFMQDIEKD---LGLT--REKLIRMALLLGSDYTEGISGIG 993
F + +++ + E +Q+I D LGL RE+ + + +LLG DY + I +G
Sbjct: 647 FNTPILLRHLTFSEQRKEP--IQEIHLDKLLLGLNMEREQFVDLCILLGCDYLDPIPKVG 704
Query: 994 IVNAIEVVNAFPEEDGLSKFREWIES--------PD--PT-----ILGKFDVQTGASSRK 1038
A++++ E L K E++++ PD P + K DV
Sbjct: 705 PNTALKLIR---EHGSLEKVVEFMKTDKKQKFVIPDDWPYEDARELFFKPDV-------- 753
Query: 1039 RRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHT----QLRL 1094
R +SD + D + K V G+ +F + F ED+ + ++ ++KH Q RL
Sbjct: 754 RSASDPECDFKWEKPDVPGLVQFLVNEKGFSEDRVRSAAAR------LEKHLKGTQQQRL 807
Query: 1095 EAFY 1098
E F+
Sbjct: 808 EGFF 811
>gi|340516246|gb|EGR46495.1| predicted protein [Trichoderma reesei QM6a]
Length = 791
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 9/143 (6%)
Query: 870 YMYLGDEQKKLERNAESVSSEMFA--ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 927
+++ G + K +RN S + FA + L+++FG AP EAEA+CA ++ +VD
Sbjct: 71 FVFDGPRKPKFKRNKRSGRGDGFAAAHAKRLIRLFGFVVHDAPGEAEAECALLQRNGIVD 130
Query: 928 GVVTDDSDVFLFGARSVYKNIFDDRK-----YVETYFMQDIE-KDLGLTREKLIRMALLL 981
V+++D D +FG +N + K +V Y ++++ +LGL RE ++ +AL+
Sbjct: 131 AVLSEDVDTIMFGCTRTLRNWSAEGKAGKPTHVSMYDVEEMNMANLGLDREGMVLVALMS 190
Query: 982 GSDYT-EGISGIGIVNAIEVVNA 1003
G DY EG+ G G A E A
Sbjct: 191 GGDYIPEGVPGCGPKVACEAAKA 213
>gi|73668744|ref|YP_304759.1| flap endonuclease-1 [Methanosarcina barkeri str. Fusaro]
gi|121723542|sp|Q46D63.1|FEN_METBF RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|72395906|gb|AAZ70179.1| flap endonuclease 1 [Methanosarcina barkeri str. Fusaro]
Length = 338
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 85/168 (50%), Gaps = 23/168 (13%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + + V E+ + + LL + G+P+I AP E EAQ A+M L D V + D D FL
Sbjct: 119 KYAQASSKVDQEIVEDSKYLLSIMGIPWIQAPCEGEAQAAHMVLKKDADYVASQDYDSFL 178
Query: 939 FGARSVYKN--IFDDRKYVETYFMQDIEKD----------LGLTREKLIRMALLLGSDYT 986
FGA +V +N + RK + D+E + LG+ RE+LI +A+ +G+D+
Sbjct: 179 FGAPTVIRNLAVTGKRKLPGKHVYVDVELELIELEETLGVLGINREQLIDIAICVGTDFN 238
Query: 987 EGISGIGIVNAIEV------VNAFPEEDG-----LSKFREWIESPDPT 1023
+G+ +G A+++ ++A E G L + RE PD T
Sbjct: 239 KGLEKVGPKTALKLIKKHGDIHAVLREKGVEIKELDRIRELFTHPDVT 286
>gi|240273940|gb|EER37459.1| DNA repair protein RAD2 [Ajellomyces capsulatus H143]
Length = 519
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 29/242 (11%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D
Sbjct: 244 AEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 303
Query: 934 SDVFLFGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGI 989
D F + + +++ F +++ +E + + +E L + R++ + + +LLG DY + I
Sbjct: 304 MDTLCFDSPILLRHLTFSEQRKEPILEIHLDRVLE-GLDMDRKQFVDLCILLGCDYLDPI 362
Query: 990 SGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVN 1049
+G A++++ + L + E I+S DP K+ + ++ R D DV
Sbjct: 363 PKVGPNTALKLIR---DHGSLEQVVEAIKS-DPK--KKYTIPEDWPYKEARELFFDPDVR 416
Query: 1050 YAKNS----------VGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEA 1096
A + V G+ +F F ED+ +A +N+K Q RLE
Sbjct: 417 NADHPDCDFKWEAPDVEGLVKFLVEEKAFSEDRVRNAAARLQKNLKTA-----QQSRLEG 471
Query: 1097 FY 1098
F+
Sbjct: 472 FF 473
>gi|37719664|gb|AAR01941.1| flap endonuclease 1 [Plasmodium falciparum]
Length = 648
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
V+ + E ++LL + G+P I AP EAE+QCA++ NL T+D+D +FG + + +
Sbjct: 135 VTRKQNEEAKKLLTLMGIPIIEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIR 194
Query: 947 NI-------------FDDRKYVETYF-MQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
N+ R Y+ T ++ + K L LT ++ I +L G DY + I GI
Sbjct: 195 NLNANATSNQNKNKNNSKRGYILTEINLEQVLKGLNLTMDEFIDFCILCGCDYCDTIKGI 254
Query: 993 GIVNAIEVVNAF 1004
G A ++ +
Sbjct: 255 GSKTAYNLIKEY 266
>gi|317376191|sp|B9EMY6.1|FEN1_SALSA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|221220444|gb|ACM08883.1| Flap endonuclease 1-B [Salmo salar]
gi|221221934|gb|ACM09628.1| Flap endonuclease 1-B [Salmo salar]
Length = 380
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 115/254 (45%), Gaps = 31/254 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PYI AP EAEA CA + A V T+D D
Sbjct: 125 KFSKRLVKVTQQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDMDGLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K ++ + + +D+ LT E+ I + +LLG DY I GIG
Sbjct: 185 FGTGVLLRHLTASEAKKLPIQEFQFTRLLQDINLTHEQFIDLCILLGCDYCGTIKGIGPK 244
Query: 996 NAIEVVNAFPE-EDGLSKF--------REWIESPDPTILGKFDVQTGASSRKRRSSDGDK 1046
AI+++ E+ L +W+ + + DV S+ + S+ D+
Sbjct: 245 RAIDLIRQHGSIEEILENIDSSKHPAPEDWLYKEARGLFLQPDV-VDCSTVDLKWSEPDE 303
Query: 1047 DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH--TQLRLEAFYTFNERF 1104
D + +F + QF ED+ KKI + TQ RL+ F+T
Sbjct: 304 D---------ALIQFMCAEKQFSEDR----IKNGCKKILKSRQGSTQGRLDTFFTIT--- 347
Query: 1105 AKIRSKRIKKAVKG 1118
+ SKR + KG
Sbjct: 348 GSLSSKRKEPETKG 361
>gi|11497880|ref|NP_069102.1| flap endonuclease-1 [Archaeoglobus fulgidus DSM 4304]
gi|28380012|sp|O29975.1|FEN_ARCFU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|42543625|pdb|1RXV|A Chain A, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|42543626|pdb|1RXV|B Chain B, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|42543629|pdb|1RXW|A Chain A, Crystal Structure Of A. Fulgidus Fen-1 Bound To Dna
gi|2650376|gb|AAB90967.1| DNA repair protein RAD2 (rad2) [Archaeoglobus fulgidus DSM 4304]
Length = 336
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 14/140 (10%)
Query: 878 KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVF 937
KK + A V + + LL G+P++ AP E EAQ AYM V+ + D D
Sbjct: 117 KKYAQAAGRVDEYIVDSAKTLLSYMGIPFVDAPSEGEAQAAYMAAKGDVEYTGSQDYDSL 176
Query: 938 LFG----ARSVY---------KNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSD 984
LFG AR++ KN++ D K E ++ K LGLTRE+LI +A+L+G+D
Sbjct: 177 LFGSPRLARNLAITGKRKLPGKNVYVDVK-PEIIILESNLKRLGLTREQLIDIAILVGTD 235
Query: 985 YTEGISGIGIVNAIEVVNAF 1004
Y EG+ G+G+ A+ + +
Sbjct: 236 YNEGVKGVGVKKALNYIKTY 255
>gi|413932542|gb|AFW67093.1| hypothetical protein ZEAMMB73_718764 [Zea mays]
Length = 294
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 76/136 (55%), Gaps = 5/136 (3%)
Query: 871 MYLGDEQ--KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDG 928
M +GDE +K + V+ +C+ LL++ G+P + AP EAEAQCA + + V
Sbjct: 116 MEIGDENAIEKFSKRTVKVTGRHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQVYA 175
Query: 929 VVTDDSDVFLFGARSVYKNIFD---DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
V ++D D FGAR +++ D + V + + + ++LGLT ++ I + +L G DY
Sbjct: 176 VASEDMDTLTFGARRFLRHLTDLGYKKSPVTEFDVSKVLEELGLTMDQFIDLCILSGCDY 235
Query: 986 TEGISGIGIVNAIEVV 1001
E I GIG A++++
Sbjct: 236 CENIRGIGGQRALKLI 251
>gi|74824687|sp|Q9GZ01.1|FEN1_PLAFA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|9885425|gb|AAG01445.1| flap endonuclease-1 [Plasmodium falciparum]
Length = 650
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 14/132 (10%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
V+ + E ++LL + G+P I AP EAE+QCA++ NL T+D+D +FG + + +
Sbjct: 135 VTRKQNEEAKKLLTLMGIPIIEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIR 194
Query: 947 NI-------------FDDRKYVETYF-MQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
N+ R Y+ T ++ + K L LT ++ I +L G DY + I GI
Sbjct: 195 NLNANATSNQNKNKNNSKRGYILTEINLEQVLKGLNLTMDEFIDFCILCGCDYCDTIKGI 254
Query: 993 GIVNAIEVVNAF 1004
G A ++ +
Sbjct: 255 GSKTAYNLIKEY 266
>gi|254166886|ref|ZP_04873740.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|289596167|ref|YP_003482863.1| flap structure-specific endonuclease [Aciduliprofundum boonei T469]
gi|197624496|gb|EDY37057.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|289533954|gb|ADD08301.1| flap structure-specific endonuclease [Aciduliprofundum boonei T469]
Length = 339
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 12/135 (8%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
+ A ++ +M E ++LL G+P++ AP E EAQ AYM + D D LFGA
Sbjct: 122 QQATFLTKDMVDEAKKLLDYMGIPWVQAPSEGEAQAAYMAKKGDTYASASQDFDSLLFGA 181
Query: 942 RSVYKN--IFDDRK------YV----ETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGI 989
++ +N I RK YV E +++ K+LG++RE+L+ + +L+G+DY EGI
Sbjct: 182 PNLVRNLAITGKRKLPRKNVYVDVKPEIILLEENLKNLGISREQLVDIGILVGTDYNEGI 241
Query: 990 SGIGIVNAIEVVNAF 1004
G+G A++++ +
Sbjct: 242 KGVGPKTALKLIKKY 256
>gi|150399374|ref|YP_001323141.1| flap endonuclease-1 [Methanococcus vannielii SB]
gi|150012077|gb|ABR54529.1| XPG I [Methanococcus vannielii SB]
Length = 324
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 877 QKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV 936
+K + A + + + LL++ G+PYI AP E EAQCA + + VV+ D D
Sbjct: 117 MQKYAKRANFLDKKTIENSKRLLELMGVPYINAPSEGEAQCAELVKSKNASFVVSQDYDS 176
Query: 937 FLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIGIV 995
L+GA SV KNI K +E + + +L + +LI +A+L+G+DY GI GIG
Sbjct: 177 ILYGAESVVKNITSSNKSLELIELSKVLTELNVNLLELIDVAILIGTDYNPGGIKGIGPK 236
Query: 996 NAIEVV 1001
A EVV
Sbjct: 237 KAFEVV 242
>gi|302504898|ref|XP_003014670.1| hypothetical protein ARB_07232 [Arthroderma benhamiae CBS 112371]
gi|291177976|gb|EFE33767.1| hypothetical protein ARB_07232 [Arthroderma benhamiae CBS 112371]
Length = 359
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 29/237 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC+ LL + G+PY+ AP EAEAQCA + A V G ++D D
Sbjct: 89 KFSRRTVRVTKEHNAECKRLLGLMGIPYLDAPTEAEAQCAVLAKAGKVFGAASEDMDTLC 148
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F A + +++ F +++ +E + + +E LG+ + + + +LLG DY + I +G
Sbjct: 149 FAAPVLLRHLTFSEQRKEPILEIHLDKVLE-GLGMDMTQFVDLCILLGCDYLDPIPKVGP 207
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDV------ 1048
A++++ + L K E I+S DP K+ + + R + DV
Sbjct: 208 NTALKMIR---DHGTLEKVVEAIQS-DPK--KKYVIPDDWPYLQARELFFNPDVRPADAP 261
Query: 1049 ----NYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
++ V G+ F F ED+ +A ++N+K Q RLE F+
Sbjct: 262 ECDFKWSAPDVEGLVRFLVEEKGFSEDRVRNGAARLTKNLK-----SAQQSRLEGFF 313
>gi|395328084|gb|EJF60479.1| hypothetical protein DICSQDRAFT_162059 [Dichomitus squalens LYAD-421
SS1]
Length = 1162
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 28/170 (16%)
Query: 877 QKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV 936
+K+ + +S S E+ + +EL+++FG+ + A EAEA+ A++ +D VVTDD D
Sbjct: 109 EKRGSKMGKSGSHELAPKFKELIKLFGMDWREAKGEAEAELAFLNQVGAIDAVVTDDIDC 168
Query: 937 FLFGARSVYKNIFDD-----------------RKYVETYFMQDIEK--DLGLTREKLIRM 977
+FGA++V KN D + + Y DI + D+ LTR+ LI
Sbjct: 169 LIFGAQTVIKNFGLDLSGNKGNPPKNADGNTSKAHAHVYTADDIRRHPDVRLTRDGLILF 228
Query: 978 ALLLGSDYTEGI--SGIGIVNAI-------EVVNAFPEEDGLSKFREWIE 1018
AL+ G DY GI G + +A+ ++V A+ F W+E
Sbjct: 229 ALMSGGDYDTGIFRCGPAMAHAMARSGFGEQLVQAYERYGESGHFTIWLE 278
>gi|315426143|dbj|BAJ47788.1| flap endonuclease 1 [Candidatus Caldiarchaeum subterraneum]
gi|343485003|dbj|BAJ50657.1| flap endonuclease 1 [Candidatus Caldiarchaeum subterraneum]
Length = 344
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 12/131 (9%)
Query: 886 SVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVY 945
S+ M +LL+ G+PY++AP E EAQ AYM V + D D LFG+ +
Sbjct: 129 SLEKYMVESAADLLKAMGVPYVMAPSEGEAQAAYMAAKGSVYAAGSQDMDSLLFGSPRLV 188
Query: 946 KN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIG 993
+N I RK YVE ++ + LGLTRE+LI + LL+G+DY+ + G+G
Sbjct: 189 RNLSIVGRRKLPGRKEYVEVVPEIIYLDKLLASLGLTREQLIDIGLLVGTDYSPQVRGVG 248
Query: 994 IVNAIEVVNAF 1004
A+++V +
Sbjct: 249 PKTALKIVKEY 259
>gi|430812753|emb|CCJ29874.1| unnamed protein product [Pneumocystis jirovecii]
Length = 225
Score = 76.3 bits (186), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R ++ E EC++LL++ G+PY+ AP EAEAQCA + A V ++D D+
Sbjct: 3 KFSRRTVRMTREHNEECKKLLKLMGIPYVDAPCEAEAQCAALAKAGKVYAAASEDMDILC 62
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + +++ F ++K + ++ K+L + E+ + + +LLG DY E I GIG
Sbjct: 63 FSTPILLRHLTFSEQKKEPITEVNLEKALKELNMPLEQFVDLCILLGCDYCEPIKGIGPK 122
Query: 996 NAIEVVNAFPEEDGLSKFRE 1015
A+E++ + D F +
Sbjct: 123 RALELIREYKSLDAFINFAD 142
>gi|49619155|gb|AAT68162.1| flap structure specific endonuclease 1 [Danio rerio]
Length = 380
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 31/254 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PYI AP EAEA CA + A V T+D
Sbjct: 125 KFSKRLVKVTKQHNEECKKLLSLMGVPYIEAPCEAEASCAALVKAGKVYATATEDMAGLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K ++ + I +D+ LT ++ I + +LLG DY I GIG
Sbjct: 185 FGTTVLLRHLTASEAKKLPIQEFHFSRILQDMELTHQQFIDLCILLGCDYCGTIKGIGPK 244
Query: 996 NAIEVVNA------FPEEDGLSKFR---EWIESPDPTILGKFDVQTGASSRKRRSSDGDK 1046
AI+++ E +K R +W+ + + +V G S
Sbjct: 245 RAIDLIKQHGSIEEILENIDPNKHRAPEDWLYKEARGLFLEPEVVDGTSV---------- 294
Query: 1047 DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH--TQLRLEAFYTFNERF 1104
D+ + + G+ +F + QF ED+ KKI + TQ RL+ F+T
Sbjct: 295 DLKWNEPDEDGLIQFMCAEKQFSEDR----IRNGCKKITKSRQGSTQGRLDTFFTVT--- 347
Query: 1105 AKIRSKRIKKAVKG 1118
I SKR + KG
Sbjct: 348 GSISSKRKEPETKG 361
>gi|393232393|gb|EJD39975.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 400
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
+ R V+ E EC+ LL++ G+P +IAP EAEAQCA + V ++D D
Sbjct: 126 RFTRRTVKVTREHNEECRRLLRLMGIPVVIAPSEAEAQCAELARGGKVYAAGSEDMDTLT 185
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FGA +Y+++ F + K + +Q L +T ++ I + LLLG DY E I G+G
Sbjct: 186 FGAPILYRHLTFSEAKKQPISEIDLQKALDGLNMTMDQFIELCLLLGCDYLEPIKGVGPK 245
Query: 996 NAIEVV 1001
+A++ +
Sbjct: 246 SALKYM 251
>gi|393247337|gb|EJD54845.1| PIN domain-like protein [Auricularia delicata TFB-10046 SS5]
Length = 585
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 19/129 (14%)
Query: 889 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKN- 947
S++ A +EL+ FG + +AP EAEA+ AY+ ++D V TDD+D LFGA +V +N
Sbjct: 105 SKLVAGMKELIDAFGFQWHLAPGEAEAELAYLNQIGVIDAVWTDDADTLLFGATTVIRNP 164
Query: 948 -----------IFD-----DRKYVETYFMQDI--EKDLGLTREKLIRMALLLGSDYTEGI 989
+ + D K+V D+ ++ LTR LI +ALL G DY +G+
Sbjct: 165 SSTLSGNVENPLLNAESRADGKHVLVVNAGDLASHDEVQLTRGGLILIALLRGGDYGKGV 224
Query: 990 SGIGIVNAI 998
S IGI A+
Sbjct: 225 SQIGIQIAL 233
>gi|318055766|ref|NP_001187811.1| flap endonuclease 1-b [Ictalurus punctatus]
gi|308324033|gb|ADO29152.1| flap endonuclease 1-b [Ictalurus punctatus]
Length = 380
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 31/254 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PYI AP EAEA CA + A T+D D
Sbjct: 125 KFSKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKAYATATEDMDGLT 184
Query: 939 FGARSVYKNIFDD---RKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + ++ + + +++ L+ ++ I + +LLG DY I GIG
Sbjct: 185 FGTSVLLRHLTASEAKKLSIQEFHFSRVLQEMSLSHQQFIDLCILLGCDYCGTIKGIGPK 244
Query: 996 NAIEVVNAFPE-EDGLSKF--------REWIESPDPTILGKFDVQTGASSRKRRSSDGDK 1046
AI+++ + E+ L +W+ + + +V ++ + + ++ D+
Sbjct: 245 RAIDLIKQYGSIEEILDNIDQSKHPAPEDWLYKEARALFLEPEV-VDCTAMELKWNEPDE 303
Query: 1047 DVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH--TQLRLEAFYTFNERF 1104
D G+ +F S QF ED+ KKI + TQ RL+ F+T
Sbjct: 304 D---------GLVQFMCSEKQFSEDR----IRNGCKKIMKSRRGSTQGRLDTFFTVT--- 347
Query: 1105 AKIRSKRIKKAVKG 1118
I SKR + VKG
Sbjct: 348 GSISSKRKEPEVKG 361
>gi|340052549|emb|CCC46830.1| putative flap endonuclease-1 (FEN-1), fragment [Trypanosoma vivax
Y486]
Length = 393
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 3/129 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K+ + ++ E E ++LLQ+ G+P + AP EAEAQCA + N V T+D D
Sbjct: 129 KMGKRTVRLTQEQMEEAKKLLQLMGIPVVQAPSEAEAQCAELVKKNKAWAVGTEDMDALT 188
Query: 939 FGARSVYKNIF---DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FGA + +++ ++ + + + DI + G+T E+ + + +LLG DY I GIG
Sbjct: 189 FGAPIMLRHLTYSEAKKRPIAEFHLDDILQTSGMTMEQFVDLCILLGCDYVPKIPGIGPH 248
Query: 996 NAIEVVNAF 1004
A E + F
Sbjct: 249 KAWEGIKKF 257
>gi|449299844|gb|EMC95857.1| hypothetical protein BAUCODRAFT_109503 [Baudoinia compniacensis UAMH
10762]
Length = 393
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 113/246 (45%), Gaps = 29/246 (11%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R V+ E AE Q LL++ G+P+IIAP EAEAQCA + A V ++D
Sbjct: 120 AEEVEKFSRRTVRVTREHNAEAQRLLKLMGVPFIIAPTEAEAQCAVLARAGKVYAAASED 179
Query: 934 SDVFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGIS 990
D F + + +++ F +++ ++ + + L + + I + +LLG DY + +
Sbjct: 180 MDTLTFNSPVLLRHLTFSEQRKEPIQEIHLDAVLSGLEMDLPQFIDLCILLGCDYVDPVK 239
Query: 991 GIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKF---------DVQTGASSRKRRS 1041
GIG A+ ++ E L K E + T GK+ D + R
Sbjct: 240 GIGPKVALALIR---EHKTLEKVVESV-----TKSGKYTFPDDWPYQDARLLFLEPDVRP 291
Query: 1042 SDGDK-DVNYAKNSVGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAF 1097
+D + D ++ V G+ +F F+ED+ +A +N+K Q RLE F
Sbjct: 292 ADAPECDFHWNGPDVDGLVKFLVEEKGFNEDRVRSGAARLQKNLK-----SSQQARLEGF 346
Query: 1098 YTFNER 1103
+ E+
Sbjct: 347 FKVKEK 352
>gi|367031744|ref|XP_003665155.1| hypothetical protein MYCTH_2308577 [Myceliophthora thermophila ATCC
42464]
gi|347012426|gb|AEO59910.1| hypothetical protein MYCTH_2308577 [Myceliophthora thermophila ATCC
42464]
Length = 760
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
+ A V+ EM E L+ +PY++AP EA+AQ Y+E L+ G+V++DSD+ +FGA
Sbjct: 120 QKAIDVTPEMARHLIEELKKADVPYVVAPYEADAQLVYLERQGLISGIVSEDSDLLVFGA 179
Query: 942 RSVYKNIFDDRKYVETY---FMQDIEKDL-GLTREKLIRMALLLGSDYTEGISGIGIVNA 997
+ + + + VE F E L G T + MA+L G DY +G+S IG+ A
Sbjct: 180 KRLLTKLDQHGQCVEINRRDFCAVREISLTGWTDREFRHMAILSGCDYLDGVSNIGLKTA 239
Query: 998 IEVV 1001
+V
Sbjct: 240 YRLV 243
>gi|365989632|ref|XP_003671646.1| hypothetical protein NDAI_0H02290 [Naumovozyma dairenensis CBS 421]
gi|343770419|emb|CCD26403.1| hypothetical protein NDAI_0H02290 [Naumovozyma dairenensis CBS 421]
Length = 384
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER VS E E ++LL++ G+PY+ AP EAEAQCA + V ++D D
Sbjct: 120 EKIKQERRLVKVSKEHNDEAKKLLELMGIPYVNAPGEAEAQCAELAKKGKVYAAASEDMD 179
Query: 936 VFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ F + K ++ + + + L LT E+ I + ++LG DY E I GI
Sbjct: 180 TLCYRTPYLLRHLTFSEAKKEPIQEINTEQVLQGLELTLEQFIDLGIMLGCDYCENIRGI 239
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIESPDPT 1023
G V A +++ E L K E+IES + T
Sbjct: 240 GPVTAFKLIK---EHGSLEKIIEFIESDENT 267
>gi|256271259|gb|EEU06336.1| Din7p [Saccharomyces cerevisiae JAY291]
Length = 430
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 17/131 (12%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ EM + ++ +PYI+AP EA+ Q Y+E L+ G++++DSD+ +FG +++
Sbjct: 125 ITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGCKTLIT 184
Query: 947 NIFDDRKYVETYFMQDIEKD----------LG-LTREKLIRMALLLGSDYTEGISGIGIV 995
+ D K +E I KD LG L+ ++ + + L G DYT GI +G+V
Sbjct: 185 KLNDQGKALE------ISKDDFSALPENFPLGELSEQQFLNLVCLAGCDYTSGIWKVGVV 238
Query: 996 NAIEVVNAFPE 1006
A+++V + E
Sbjct: 239 TAMKIVKRYSE 249
>gi|320591287|gb|EFX03726.1| exodeoxyribonuclease 1 [Grosmannia clavigera kw1407]
Length = 805
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 14/124 (11%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ EM E L+ GLPYI+AP EA+AQ Y+E LV G++++DSD+ +FGA+ +
Sbjct: 125 ITPEMACHVIEELKKLGLPYIVAPYEADAQMVYLEREGLVSGILSEDSDLLVFGAKRLLT 184
Query: 947 NIFDDRKYVETYFMQDIEKDLGLTRE---------KLIRMALLLGSDYTEGISGIGIVNA 997
+ ++ + ++ +D RE + MA+L G DY EGI +G+ A
Sbjct: 185 KM-----DMQGHCIEINRRDFCACREISLTDWTDREFRHMAILSGCDYLEGIGNLGLKTA 239
Query: 998 IEVV 1001
++
Sbjct: 240 YRMI 243
>gi|337283806|ref|YP_004623280.1| flap endonuclease-1 [Pyrococcus yayanosii CH1]
gi|334899740|gb|AEH24008.1| flap endonuclease-1 [Pyrococcus yayanosii CH1]
Length = 341
Score = 76.3 bits (186), Expect = 1e-10, Method: Composition-based stats.
Identities = 53/154 (34%), Positives = 85/154 (55%), Gaps = 15/154 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + A V+ + + ++LL++ G+P I AP E EAQ AY+ V + D
Sbjct: 115 EEARKYAQRATRVNEALVEDAKKLLELMGIPVIQAPSEGEAQAAYIAAKGAVYASASQDY 174
Query: 935 DVFLFGARSVYKN--IFDDRK------YV----ETYFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA + +N I RK YV E ++++ K L + REKLI +A+L+G
Sbjct: 175 DSLLFGAPRLVRNLTITGKRKLPGKDVYVDVKPELIVLEEVLKALKIDREKLIELAILVG 234
Query: 983 SDYTE-GISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
+DY G+ GIG A+E+V +D L+K+++
Sbjct: 235 TDYNPGGVKGIGPKKALEIVRH--SKDPLAKWQK 266
>gi|226294510|gb|EEH49930.1| DNA-repair protein rad2 [Paracoccidioides brasiliensis Pb18]
Length = 528
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 29/242 (11%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
++ +K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D
Sbjct: 253 AEDVEKFSRRTVRVTREHNEECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASED 312
Query: 934 SDVFLFGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGI 989
D F + + +++ F +++ +E + + +E L + R++ + + +LLG DY + I
Sbjct: 313 MDTLCFDSPILLRHLTFSEQRKEPILEIHLDRVLE-GLDMDRKQFVDLCILLGCDYLDPI 371
Query: 990 SGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK----------R 1039
IG A++++ + L K E IES DP K+ + + R
Sbjct: 372 PKIGPNTALKLIR---DHGSLEKVVEAIES-DPK--KKYVIPEDWPYKDARELFFDPDVR 425
Query: 1040 RSSDGDKDVNYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEA 1096
++ D D + V G+ +F F ED+ +A +N+K Q RLE
Sbjct: 426 KADHPDCDFKWEAPDVEGLVKFLVEEKAFSEDRVRNAAARLQKNLKTA-----QQSRLEG 480
Query: 1097 FY 1098
F+
Sbjct: 481 FF 482
>gi|452983877|gb|EME83635.1| hypothetical protein MYCFIDRAFT_154172 [Pseudocercospora fijiensis
CIRAD86]
Length = 788
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 895 CQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDR-- 952
++LL+ F P+ +AP EAEA+CA ++ +VD V+++D D +FG+ + +N +
Sbjct: 107 AKQLLKQFAFPWHVAPGEAEAECALLQREGIVDAVLSEDVDTLMFGSGTTLRNWTAESTN 166
Query: 953 ---KYVETYFMQDIEKDLGLTREKLIRMALLLGSDY-TEGISGIG 993
+V Y + ++ GL RE +I +AL+ G DY TEGI G G
Sbjct: 167 KTPTHVNVYRAAETKEKSGLDREGMILVALMSGGDYITEGIPGCG 211
>gi|332796311|ref|YP_004457811.1| XPG I domain-containing protein [Acidianus hospitalis W1]
gi|332694046|gb|AEE93513.1| XPG I domain protein [Acidianus hospitalis W1]
Length = 344
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 13/142 (9%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E KK + A ++++M E + LL+ G+P + AP E EA+ AY+ + D D
Sbjct: 111 ELKKYSQMATRLTNDMAEEGKRLLEAMGIPVVQAPSEGEAEAAYLCSQGYTWAAASQDYD 170
Query: 936 VFLFGARSVYKNIFDDRK--------YVET----YFMQDIEKDLGLTREKLIRMALLLGS 983
LFGA + +N+ K YVE ++D+ K G+TRE+L+ + +L+G+
Sbjct: 171 SLLFGANKLIRNLTLTGKRKLPKKDVYVEIKPELIELEDLLKKFGITREQLVDIGILIGT 230
Query: 984 DY-TEGISGIGIVNAIEVVNAF 1004
DY +GI GIG V A+ ++ +
Sbjct: 231 DYDPDGIKGIGPVTALRIIKKY 252
>gi|340518752|gb|EGR48992.1| nuclease-like protein [Trichoderma reesei QM6a]
Length = 733
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Query: 853 EATEKILEEEMQILDHEYMYLGDEQKKLE--RNAESVSSEMFAECQELLQMFGLPYIIAP 910
E+ K EE+++ L +EY+ G + + + ++ EM + + L+ +PY++AP
Sbjct: 87 ESRAKKREEKLK-LANEYLKAGKPSQAAQEFQKCIDITPEMASALIQQLKKMDIPYVVAP 145
Query: 911 MEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETY---FMQDIEKDL 967
EA+AQ Y+E V G+++DDSD+ +FGA+ + + +E F E L
Sbjct: 146 YEADAQLVYLERHGFVSGIISDDSDLLVFGAKRLLTKLDQYGNCIEINRRDFCACREISL 205
Query: 968 -GLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
G + + RMA++ G DY G+ G+G+ A ++
Sbjct: 206 TGWSDTEFRRMAIMSGCDYLHGLPGVGLKTAYRMI 240
>gi|315047298|ref|XP_003173024.1| hypothetical protein MGYG_09092 [Arthroderma gypseum CBS 118893]
gi|311343410|gb|EFR02613.1| hypothetical protein MGYG_09092 [Arthroderma gypseum CBS 118893]
Length = 459
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 70/126 (55%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC+ LL + G+PY+ AP EAEAQCA + A V G ++D D
Sbjct: 189 KFSRRTVRVTKEHNAECKRLLGLMGIPYLDAPTEAEAQCAVLAKAGKVFGAASEDMDTLC 248
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ + ++ + + LG+ + + + +LLG DY + I +G
Sbjct: 249 FAAPVLLRHLTFSEQRKEPILEIHLEKVLEGLGMDMTQFVDLCILLGCDYLDPIPKVGPN 308
Query: 996 NAIEVV 1001
A++++
Sbjct: 309 TALKLI 314
>gi|115456427|ref|NP_001051814.1| Os03g0834000 [Oryza sativa Japonica Group]
gi|62510683|sp|Q75LI2.1|FEN12_ORYSJ RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B; AltName:
Full=OsFEN-1b
gi|317374867|sp|B8AMS4.1|FEN12_ORYSI RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
gi|40714676|gb|AAR88582.1| flap endonuclease-1b [Oryza sativa Japonica Group]
gi|108711942|gb|ABF99737.1| Flap endonuclease-1b, putative, expressed [Oryza sativa Japonica
Group]
gi|113550285|dbj|BAF13728.1| Os03g0834000 [Oryza sativa Japonica Group]
gi|215692762|dbj|BAG88230.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218194043|gb|EEC76470.1| hypothetical protein OsI_14202 [Oryza sativa Indica Group]
gi|222626117|gb|EEE60249.1| hypothetical protein OsJ_13256 [Oryza sativa Japonica Group]
Length = 412
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 873 LGDEQ--KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVV 930
+GDE +K + V+ + +C+ LL + G+P + AP EAEAQCA + + V +
Sbjct: 118 VGDEDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQAPGEAEAQCAALCENHKVFAIA 177
Query: 931 TDDSDVFLFGARSVYKNIFD---DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE 987
++D D FGAR +++ D R V + + + ++LGLT ++ I + +L G DY E
Sbjct: 178 SEDMDSLTFGARRFLRHLTDLSFKRSPVTEFEVSKVLEELGLTMDQFIDLCILSGCDYCE 237
Query: 988 GISGIGIVNAIEVV 1001
I GIG A++++
Sbjct: 238 NIRGIGGQRALKLI 251
>gi|328354260|emb|CCA40657.1| exonuclease 1 [Komagataella pastoris CBS 7435]
Length = 567
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 85/157 (54%), Gaps = 16/157 (10%)
Query: 869 EYMYLGDE-----QKKLERNAES----VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 919
EY LGD+ +KL N V+ EM + + + +++AP EA+AQ Y
Sbjct: 98 EYRKLGDQAQLQGNRKLAMNYYQKCCDVTPEMAKALIDEFKARQISFVVAPYEADAQMVY 157
Query: 920 MELANLVDGVVTDDSDVFLFGARSVYKNIFDDR---KYVETYFMQDIEKDLG---LTREK 973
+E+ VDG++++DSD+ +FG+RS+ + +DR +V+ +D G L++ +
Sbjct: 158 LEMKGFVDGIISEDSDLLVFGSRSLITKL-NDRGECIHVQRNNFKDCANIPGLAHLSQHQ 216
Query: 974 LIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL 1010
+A L G DYT+GI GIG++ A ++V + D +
Sbjct: 217 FRIVASLSGCDYTKGIPGIGVIKAFQLVRKYESIDKI 253
>gi|29467052|dbj|BAC66965.1| flap endonuclease-1b [Oryza sativa Japonica Group]
gi|37496995|dbj|BAC98428.1| flap endonuclease-1b [Oryza sativa Japonica Group]
Length = 412
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 75/134 (55%), Gaps = 5/134 (3%)
Query: 873 LGDEQ--KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVV 930
+GDE +K + V+ + +C+ LL + G+P + AP EAEAQCA + + V +
Sbjct: 118 VGDEDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQAPGEAEAQCAALCENHKVFAIA 177
Query: 931 TDDSDVFLFGARSVYKNIFD---DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE 987
++D D FGAR +++ D R V + + + ++LGLT ++ I + +L G DY E
Sbjct: 178 SEDMDSLTFGARRFLRHLTDLSFKRSPVTEFEVSKVLEELGLTMDQFIDLCILSGCDYCE 237
Query: 988 GISGIGIVNAIEVV 1001
I GIG A++++
Sbjct: 238 NIRGIGGQRALKLI 251
>gi|432927428|ref|XP_004081007.1| PREDICTED: flap endonuclease 1-like [Oryzias latipes]
Length = 380
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ + EC++LL + G+PYI AP EAEA CA + V T+D D
Sbjct: 125 KFTKRLVKVTKQHNDECKKLLSLMGVPYIEAPCEAEASCAALVKEGKVFATATEDMDGLT 184
Query: 939 FGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + +++ + +K ++ + I +D+ LT+E+ I + +LLG DY I GIG
Sbjct: 185 FGTNVLLRHLTASEAKKLPIQEFHFNRILQDMDLTKEQFIDLCILLGCDYCGTIKGIGPK 244
Query: 996 NAIEVV 1001
A++++
Sbjct: 245 RAVDLI 250
>gi|298675706|ref|YP_003727456.1| flap structure-specific endonuclease [Methanohalobium evestigatum
Z-7303]
gi|298288694|gb|ADI74660.1| flap structure-specific endonuclease [Methanohalobium evestigatum
Z-7303]
Length = 338
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 12/141 (8%)
Query: 873 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 932
L +E K + + + ++ + + LL+ G+PY+ +P E EAQ A+M D V +
Sbjct: 113 LTEEAYKYAQGSARIDDQILDDAKYLLESMGIPYLQSPSEGEAQAAHMVQKGDADYVGSQ 172
Query: 933 DSDVFLFGARSVYKN--IFDDRK------YV----ETYFMQDIEKDLGLTREKLIRMALL 980
D D LFGA V +N I RK Y+ ET M++ K +G+TR KLI +AL
Sbjct: 173 DYDALLFGAPHVIRNLTITGKRKLPGKNTYIDLKPETIDMEENLKSMGITRSKLIDIALC 232
Query: 981 LGSDYTEGISGIGIVNAIEVV 1001
+G+DY +G+ IG A+++V
Sbjct: 233 VGTDYNKGLEKIGPKRALKLV 253
>gi|358385942|gb|EHK23538.1| hypothetical protein TRIVIDRAFT_37141, partial [Trichoderma virens
Gv29-8]
Length = 731
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 6/155 (3%)
Query: 853 EATEKILEEEMQILDHEYMYLGDEQKKLE--RNAESVSSEMFAECQELLQMFGLPYIIAP 910
EA+ E+ L +EY+ G + + + ++ EM + + L+ +PY++AP
Sbjct: 85 EASRAKKREDKLKLANEYLKAGKPSQAAQEFQKCIDITPEMASALIQQLKKMDIPYVVAP 144
Query: 911 MEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETY---FMQDIEKDL 967
EA+AQ Y+E VDG+++DDSD+ +FGA+ + + +E F E L
Sbjct: 145 YEADAQLVYLERHGFVDGIISDDSDLLVFGAKRLLTKLDQYGNCIEINRRDFCACREISL 204
Query: 968 -GLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
G + + RMA++ G DY G+ G+G+ A ++
Sbjct: 205 TGWSDAEFRRMAIMSGCDYLNGLPGVGLKTAYRML 239
>gi|344231339|gb|EGV63221.1| PIN domain-like protein [Candida tenuis ATCC 10573]
Length = 673
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 83/155 (53%), Gaps = 7/155 (4%)
Query: 861 EEMQILDHEYMYLGDEQKKLER--NAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
EE Q EYM G+++ + A +V+S+M L + Y++AP EA+ Q
Sbjct: 97 EEAQAKADEYMKKGNKKLAWKEFMKAAAVTSQMSKSVMVELDRMNVKYVVAPYEADPQMV 156
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVE---TYF--MQDIEKDLGLTREK 973
Y+E VDG++++DSD+ +FG R++ + D + +E + F + I T ++
Sbjct: 157 YLEKKGYVDGIISEDSDLLIFGCRTLITKLNDFGECIEISKSNFSKVTTISGLDSFTPQQ 216
Query: 974 LIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEED 1008
L +A+L G DYT+G+ G+G+ A +V + + D
Sbjct: 217 LRLVAMLSGCDYTKGVPGVGLKTAFNLVKKYNQID 251
>gi|282165429|ref|YP_003357814.1| flap structure-specific endonuclease [Methanocella paludicola SANAE]
gi|282157743|dbj|BAI62831.1| flap structure-specific endonuclease [Methanocella paludicola SANAE]
Length = 339
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 79/140 (56%), Gaps = 12/140 (8%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + + S+++++ + +ELL G+P++IAP E EAQ AYM D V + D D L
Sbjct: 118 KYAQASTSINAQIIKDSKELLGYMGMPFLIAPSEGEAQAAYMVQKGAADFVGSQDYDSLL 177
Query: 939 FGARSVYKN--IFDDRK------YV----ETYFMQDIEKDLGLTREKLIRMALLLGSDYT 986
FGA + +N I RK YV + ++++ + L +TRE+LI M +L+G+D+
Sbjct: 178 FGAPRMVRNVTITGRRKIPRRGVYVDVKPQIVELKEVLETLEVTREQLIDMGILVGTDFN 237
Query: 987 EGISGIGIVNAIEVVNAFPE 1006
GI +G A+++V P+
Sbjct: 238 PGIYKVGPKTALKLVKKHPD 257
>gi|241955293|ref|XP_002420367.1| exodeoxyribonuclease, putative [Candida dubliniensis CD36]
gi|223643709|emb|CAX41445.1| exodeoxyribonuclease, putative [Candida dubliniensis CD36]
Length = 715
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 5/126 (3%)
Query: 884 AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARS 943
A V+S+M L + YI+AP EA+ Q Y+E +VDG++++DSD+ +FG +
Sbjct: 122 AAYVTSQMAKSVMCELDNLSIKYIVAPYEADPQMVYLEKMGVVDGILSEDSDLLIFGCKK 181
Query: 944 VYKNIFDDRKYVET---YF--MQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
+ + DD VE F +++I E+L +A+L G DYT+G+ GIG+ A
Sbjct: 182 LITKLKDDGTCVEINRDKFDKVKEIPYLNQYNMEQLRLVAMLSGCDYTKGVPGIGLRTAF 241
Query: 999 EVVNAF 1004
++V +
Sbjct: 242 QLVRKY 247
>gi|345563417|gb|EGX46418.1| hypothetical protein AOL_s00109g176 [Arthrobotrys oligospora ATCC
24927]
Length = 610
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
Query: 870 YMYLGDEQKKLERNAESVSSE--MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 927
+++ G ++ + +R E + A + L+ FG P AP EAEA+CAY++ +VD
Sbjct: 79 FVFDGKDRPEFKRGKSISGGEGYLLAFSRRLITAFGFPIHNAPGEAEAECAYLQKQGIVD 138
Query: 928 GVVTDDSDVFLFGARSVYKNI-FDDRKYVE---TYFMQDIEKDLGLTREKLIRMALLLGS 983
V+++D D +FG R +++ D K +E Y + I GLT ++ ALL G
Sbjct: 139 AVLSEDVDTLMFGCRQSWRSCEKGDSKTLEIMQVYQSRVIRDKTGLTPAGMVLTALLSGG 198
Query: 984 DY-TEGISGIGIVNAIEVVNA 1003
DY T G++GIG+ A+ A
Sbjct: 199 DYNTAGVAGIGMKQAVAAAKA 219
>gi|323354056|gb|EGA85902.1| Rad27p [Saccharomyces cerevisiae VL3]
Length = 382
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 6/147 (4%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER VS E E Q+LL + G+PYIIAP EAEAQCA + V ++D D
Sbjct: 120 EKMKQERRLVKVSKEHNEEAQKLLGLMGIPYIIAPTEAEAQCAELAKKGKVYAAASEDMD 179
Query: 936 VFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ F + K + + + + L LT E+ + + ++LG DY E I +
Sbjct: 180 TLCYRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQFVDLCIMLGCDYCESIRXV 239
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIES 1019
G V A++++ + K E+IES
Sbjct: 240 GPVTALKLIKT---HGSIEKIVEFIES 263
>gi|254168936|ref|ZP_04875776.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
gi|197622200|gb|EDY34775.1| XPG I-region domain protein [Aciduliprofundum boonei T469]
Length = 339
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E + + A ++ M E ++LL G+P++ AP E EAQ AYM + D
Sbjct: 115 EEARSKAQQATFLTKNMVDEAKKLLDYMGIPWVQAPSEGEAQAAYMAKKGDTYASASQDF 174
Query: 935 DVFLFGARSVYKN--IFDDRK------YV----ETYFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA ++ +N I RK YV E +++ K+LG++RE+L+ + +L+G
Sbjct: 175 DSLLFGAPNLVRNLAITGKRKLPRKNVYVDVKPEIILLEENLKNLGISREQLVDIGILVG 234
Query: 983 SDYTEGISGIGIVNAIEVVNAF 1004
+DY EGI G+G A++++ +
Sbjct: 235 TDYNEGIKGVGPKTALKLIKKY 256
>gi|224002667|ref|XP_002291005.1| nuclease, Fen1 like, Rad27 family [Thalassiosira pseudonana CCMP1335]
gi|220972781|gb|EED91112.1| nuclease, Fen1 like, Rad27 family, partial [Thalassiosira pseudonana
CCMP1335]
Length = 754
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 895 CQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI----FD 950
C+ LL++ G+P + A E EA CA + + DGV+++D D FLFGA+++Y +
Sbjct: 120 CESLLRLLGVPVVRAEAEGEALCALLNAKGVCDGVISNDGDCFLFGAKTLYTKFTMENLE 179
Query: 951 DRK---YVETYFMQDIEKD------LGLTREKLIRMALLLGSD-YTEGISGIGIVNAIEV 1000
R+ Y T M ++ D + L+RE L+ ALL GSD + G+S +G A++
Sbjct: 180 SRQVMCYDATALMATVDSDGLNGKTITLSREDLVAFALLTGSDMFGAGLSHVGHKKAVQF 239
Query: 1001 VN 1002
++
Sbjct: 240 LH 241
>gi|332021297|gb|EGI61676.1| Flap endonuclease 1-B [Acromyrmex echinatior]
Length = 381
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E +ELLQ+ G+PY+ AP EAEAQCA + A V T+D D
Sbjct: 125 KFNRRLVKVTKTHADEAKELLQLMGIPYVDAPCEAEAQCAALVKAGKVFATATEDMDALT 184
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG + + + F + RK V+ + L L + I + ++LG DYT I G+G
Sbjct: 185 FGCNVLLRRLTFSEARKLPVQEIHFDKVLAGLELNHNEFIDLCIMLGCDYTNSIKGVGPK 244
Query: 996 NAIEVV 1001
AIE++
Sbjct: 245 RAIELI 250
>gi|349577319|dbj|GAA22488.1| K7_Din7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 430
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%), Gaps = 19/146 (13%)
Query: 874 GDEQKKLERNAESV--SSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
G+ K +E +SV + EM + ++ +PYI+AP EA+ Q Y+E L+ G+++
Sbjct: 110 GNRYKAMEYFQKSVDITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIIS 169
Query: 932 DDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKD----------LG-LTREKLIRMALL 980
+DSD+ +FG +++ + D K +E I KD LG L+ ++ + L
Sbjct: 170 EDSDLLVFGCKTLITKLNDQGKALE------ISKDDFSALPENFPLGELSEQQFRNLVCL 223
Query: 981 LGSDYTEGISGIGIVNAIEVVNAFPE 1006
G DYT GI +G+V A+++V + E
Sbjct: 224 AGCDYTSGIWKVGVVTAMKIVKRYSE 249
>gi|126179869|ref|YP_001047834.1| flap endonuclease-1 [Methanoculleus marisnigri JR1]
gi|166973702|sp|A3CWV2.1|FEN_METMJ RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|125862663|gb|ABN57852.1| flap endonuclease 1 [Methanoculleus marisnigri JR1]
Length = 333
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 10/125 (8%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
+ S A +ELL + G+P++ AP E EAQ AYM V V+ D D LFG+ + +
Sbjct: 128 IDSHTIASSRELLDLLGIPWVQAPSEGEAQAAYMARQGKVTYAVSQDYDSLLFGSPVLVR 187
Query: 947 NI-FDDRKYV---------ETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVN 996
N+ R+ E + LG+TRE+L+++ +L+G+D+ GI G+G
Sbjct: 188 NLTVSGRRKTRGRTITVNPERIVLSSFLDRLGVTREQLVKIGILVGTDFNPGIRGVGGKT 247
Query: 997 AIEVV 1001
A+++V
Sbjct: 248 ALKIV 252
>gi|225555317|gb|EEH03609.1| DNA-repair protein rad2 [Ajellomyces capsulatus G186AR]
Length = 359
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 116/242 (47%), Gaps = 29/242 (11%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D
Sbjct: 84 AEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 143
Query: 934 SDVFLFGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGI 989
D F + + +++ F +++ +E + + +E L + R++ + + +LLG DY + I
Sbjct: 144 MDTLCFDSPILLRHLTFSEQRKEPILEIHLDRVLE-GLDMDRKQFVDLCILLGCDYLDPI 202
Query: 990 SGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK----------R 1039
+G A++++ + L + E I+S DP K+ + ++ R
Sbjct: 203 PKVGPNTALKLIR---DHGSLEQVVEAIKS-DPK--KKYTIPEDWPYKEARELFFDPDVR 256
Query: 1040 RSSDGDKDVNYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEA 1096
++ D D + V G+ +F F ED+ +A +N+K Q RLE
Sbjct: 257 KADHPDCDFKWEAPDVEGLVKFLVEEKAFSEDRVRNAAARLQKNLKTA-----QQSRLEG 311
Query: 1097 FY 1098
F+
Sbjct: 312 FF 313
>gi|345569735|gb|EGX52564.1| hypothetical protein AOL_s00007g552 [Arthrobotrys oligospora ATCC
24927]
Length = 390
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R + E EC+ LL++ G+PY+ AP EAEAQCA + + V ++D
Sbjct: 120 AEEIEKFSRRTVRATREHNEECKRLLKLMGIPYLDAPCEAEAQCAILAKSGKVYAAASED 179
Query: 934 SDVFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGIS 990
D F + +++ F +++ ++ + + L +TRE+ I + +LLG DY + I
Sbjct: 180 MDTLCFETPILLRHLTFSEQRKQPIQEIHLDRVMAGLDMTREQFIDLCILLGCDYCDTIP 239
Query: 991 GIGIVNAIEVVNAFPEEDGL 1010
+G A++++ + +G+
Sbjct: 240 KVGPTTALKLIRQYKSIEGV 259
>gi|154286840|ref|XP_001544215.1| flap endonuclease [Ajellomyces capsulatus NAm1]
gi|317374874|sp|A6QV55.1|FEN1_AJECN RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|150407856|gb|EDN03397.1| flap endonuclease [Ajellomyces capsulatus NAm1]
Length = 395
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 116/242 (47%), Gaps = 29/242 (11%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D
Sbjct: 120 AEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 179
Query: 934 SDVFLFGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGI 989
D F + + +++ F +++ +E + + +E L + R++ + + +LLG DY + I
Sbjct: 180 MDTLCFDSPILLRHLTFSEQRKEPILEIHLDRVLE-GLDMDRKQFVDLCILLGCDYLDPI 238
Query: 990 SGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRK----------R 1039
+G A++++ + L + E I+S DP K+ + ++ R
Sbjct: 239 PKVGPNTALKLIR---DHGSLEQVVEAIKS-DPK--KKYTIPEDWPYKEARELFFDPDVR 292
Query: 1040 RSSDGDKDVNYAKNSVGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEA 1096
++ D D + V G+ +F F ED+ +A +N+K Q RLE
Sbjct: 293 KADHPDCDFKWEAPDVEGLVKFLVEEKAFSEDRVRNAAARLQKNLKTA-----QQSRLEG 347
Query: 1097 FY 1098
F+
Sbjct: 348 FF 349
>gi|156054070|ref|XP_001592961.1| hypothetical protein SS1G_05883 [Sclerotinia sclerotiorum 1980]
gi|154703663|gb|EDO03402.1| hypothetical protein SS1G_05883 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 749
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 12/135 (8%)
Query: 878 KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVF 937
K+ R S+ M +ELL++FG Y IAP EAEA+CA ++ +VD V+++D D
Sbjct: 90 KQTGRGGASIPDLM---TKELLKLFGFEYHIAPGEAEAECALLQREGVVDAVLSEDVDTL 146
Query: 938 LFGARSVYKNIFDDRK-------YVETYFMQDIEKDL-GLTREKLIRMALLLGSDY-TEG 988
+FG+ +++ ++K +V Y + + GL RE +I +AL+ G DY TEG
Sbjct: 147 MFGSGLTFRSWSSEKKSGAGTPTHVNVYDAKATKAGRSGLDREGMILVALMSGGDYKTEG 206
Query: 989 ISGIGIVNAIEVVNA 1003
I G G+ A E A
Sbjct: 207 IPGCGVKVACEAARA 221
>gi|407414008|gb|EKF35678.1| hypothetical protein MOQ_002324 [Trypanosoma cruzi marinkellei]
Length = 393
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K+ + VS E E ++LLQ+ G+P + AP EAEAQCA + N V T+D D
Sbjct: 129 KMSKRTVRVSREQLEEAKKLLQLMGIPVVQAPSEAEAQCAELVKKNKAWAVATEDMDALT 188
Query: 939 FGARSVYKNIF---DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FGA + +++ ++ + + + +I GLT + I + +LLG DY I GIG
Sbjct: 189 FGAPVMLRHLTYSEAKKRPIAEFHLDEILGITGLTMTQFIDLCILLGCDYVPKIPGIGPQ 248
Query: 996 NAIE 999
A E
Sbjct: 249 KAWE 252
>gi|255513611|gb|EET89877.1| XPG I domain protein [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 352
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 78/142 (54%), Gaps = 12/142 (8%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K + + ++ E+ + +ELL G+ YI AP E EAQ +YM + + D
Sbjct: 117 AEEVRKFAQASTRITKEIVSSAKELLGYMGIWYINAPSEGEAQASYMCSKGIAYAAASQD 176
Query: 934 SDVFLFGARSVYKNI-FDDRKYV--ETYF------MQDIEK---DLGLTREKLIRMALLL 981
D LFG++ V +N+ R+ + + F M D++ LG+TR+KLI + +LL
Sbjct: 177 YDTLLFGSKKVVRNLTLSGRRKLPGKNVFVNVNPEMVDLDATLGSLGITRQKLIWIGILL 236
Query: 982 GSDYTEGISGIGIVNAIEVVNA 1003
G+D+ +G+ G+G A++ V +
Sbjct: 237 GTDFNDGVKGVGPKTALKAVKS 258
>gi|242032391|ref|XP_002463590.1| hypothetical protein SORBIDRAFT_01g002580 [Sorghum bicolor]
gi|241917444|gb|EER90588.1| hypothetical protein SORBIDRAFT_01g002580 [Sorghum bicolor]
Length = 477
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 873 LGDEQ--KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVV 930
+GDE +K + V+ + +C+ LL++ G+P + AP EAEAQCA + + V V
Sbjct: 194 IGDEDAVEKFSKRTVKVTRKHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQVYAVA 253
Query: 931 TDDSDVFLFGARSVYKNIFD---DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE 987
++D D FGAR +++ D + V + + + ++LGLT ++ I + +L G DY E
Sbjct: 254 SEDMDSLTFGARRFLRHLTDLGYKKSPVTEFDVSKVLEELGLTMDQFIDLCILSGCDYCE 313
Query: 988 GISGIGIVNAIEVV 1001
I GIG A++++
Sbjct: 314 NIKGIGGQRALKLI 327
>gi|317374937|sp|C5WU23.2|FEN12_SORBI RecName: Full=Flap endonuclease 1-B; Short=FEN-1-B; AltName:
Full=Flap structure-specific endonuclease 1-B
Length = 428
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 873 LGDEQ--KKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVV 930
+GDE +K + V+ + +C+ LL++ G+P + AP EAEAQCA + + V V
Sbjct: 145 IGDEDAVEKFSKRTVKVTRKHNDDCKRLLRLMGVPVVEAPGEAEAQCAALCENHQVYAVA 204
Query: 931 TDDSDVFLFGARSVYKNIFD---DRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTE 987
++D D FGAR +++ D + V + + + ++LGLT ++ I + +L G DY E
Sbjct: 205 SEDMDSLTFGARRFLRHLTDLGYKKSPVTEFDVSKVLEELGLTMDQFIDLCILSGCDYCE 264
Query: 988 GISGIGIVNAIEVV 1001
I GIG A++++
Sbjct: 265 NIKGIGGQRALKLI 278
>gi|340501530|gb|EGR28305.1| hypothetical protein IMG5_178850 [Ichthyophthirius multifiliis]
Length = 322
Score = 75.5 bits (184), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
Query: 859 LEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCA 918
LE++ + L+++ M + K+E+ ++ EM + ++L++ G P I AP EAEAQCA
Sbjct: 88 LEKQQKFLENQNMV---QALKMEQRNIFITQEMKNDAIKMLKLLGFPVIEAPGEAEAQCA 144
Query: 919 YMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMA 978
+ V VT+D D FG + + + ++ + + K+L + + I +
Sbjct: 145 ALTKTGQVFATVTEDMDALTFGTTILLRGLNSKKEPIVEINHYQMLKELEFSENQFIDLC 204
Query: 979 LLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
+L G DY E I GIG VNA +++ F + F E
Sbjct: 205 ILCGCDYLEKIEGIGPVNAYKLIKEFKNLENTINFIE 241
>gi|400601842|gb|EJP69467.1| putative EXO1 protein [Beauveria bassiana ARSEF 2860]
Length = 769
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 14/120 (11%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ EM + + L+ G+ Y++AP EA+AQ Y+E LVDG+++DDSD+ +FGA+ +
Sbjct: 125 ITPEMASTLIQELKKMGISYVVAPYEADAQLVYLERKGLVDGILSDDSDLLVFGAKRLLT 184
Query: 947 NIFDDRKYVETYFMQDIEKDLGLTRE---------KLIRMALLLGSDYTEGISGIGIVNA 997
+ +E +D G RE + RMA++ G DY G+ G+G+ A
Sbjct: 185 KLDQYGNCIEIN-----RRDFGACREVSLTGWSDTEFRRMAIMSGCDYLAGLPGVGLKTA 239
>gi|325094624|gb|EGC47934.1| DNA repair protein RAD2 [Ajellomyces capsulatus H88]
Length = 359
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 29/242 (11%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D
Sbjct: 84 AEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 143
Query: 934 SDVFLFGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGI 989
D F + + +++ F +++ +E + + +E L + R++ + + +LLG DY + I
Sbjct: 144 MDTLCFDSPILLRHLTFSEQRKEPILEIHLDRVLE-GLDMDRKQFVDLCILLGCDYLDPI 202
Query: 990 SGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVN 1049
+G A++++ + L + E I+S DP K+ + ++ R D DV
Sbjct: 203 PKVGPNTALKLIR---DHGSLEQVVEAIKS-DPK--KKYTIPEDWPYKEARELFFDPDVR 256
Query: 1050 YAKNS----------VGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEA 1096
A + V G+ +F F ED+ +A +N+K Q RLE
Sbjct: 257 NADHPDCDFKWEAPDVEGLVKFLVEEKAFSEDRVRNAAARLQKNLKTA-----QQSRLEG 311
Query: 1097 FY 1098
F+
Sbjct: 312 FF 313
>gi|308499054|ref|XP_003111713.1| hypothetical protein CRE_03137 [Caenorhabditis remanei]
gi|308239622|gb|EFO83574.1| hypothetical protein CRE_03137 [Caenorhabditis remanei]
Length = 447
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 898 LLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVET 957
LL FG+ IIAP + EAQCA +E +V G +T D D FLFG +++Y+ F +
Sbjct: 119 LLSHFGVKVIIAPGDGEAQCARLEELGVVSGCITTDFDYFLFGGKNLYRFDFSATTMLSG 178
Query: 958 YFMQDIEK-DLG-------LTREKLIRMALLLGSDYTE-GISGIGIVNAIEVVNAF 1004
+ D+ LG + R LI A+LLG DY + G+ IGI+ +++ F
Sbjct: 179 ARLHDVTHLSLGRMNIEKKVARPHLIATAILLGCDYYQRGVQNIGIITVFDILAEF 234
>gi|408381751|ref|ZP_11179299.1| flap endonuclease-1 [Methanobacterium formicicum DSM 3637]
gi|407815682|gb|EKF86252.1| flap endonuclease-1 [Methanobacterium formicicum DSM 3637]
Length = 328
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 888 SSEMFAECQE----LLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARS 943
SS MF E E L+++ G+PYI A E EAQ +YM V + D D LFGA
Sbjct: 124 SSRMFPEIVEGSKKLIKLMGIPYIQAKGEGEAQASYMVAQGDAWCVASQDYDCMLFGAPR 183
Query: 944 VYKN--IFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+ KN I +K E + I ++L +TRE+L+ +A+++G+D+ +GI GIG ++++
Sbjct: 184 MVKNLTISGTQKTPEIIELNKILENLSITREQLVDLAIMVGTDFNQGIKGIGAKKGLKLI 243
Query: 1002 NAFPEEDGLSKFREWIESPDPT-ILGKFDVQTGASSRKRRS------SDGDKDVNYAKNS 1054
E D IL K D++ R R D D D+ + K
Sbjct: 244 K---------------EHGDIYHILEKLDIELDVDPRTLREMFLNHDVDSDYDLKWQKAD 288
Query: 1055 VGGVSEF 1061
G+ F
Sbjct: 289 EEGIVNF 295
>gi|190345282|gb|EDK37144.2| hypothetical protein PGUG_01242 [Meyerozyma guilliermondii ATCC 6260]
Length = 632
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 16/111 (14%)
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKN-------IF--------D 950
Y+ AP EAEA+CA ++ +VD VVT+D+DV++FGA V +N +F D
Sbjct: 141 YVRAPGEAEAECAMLQRCGVVDYVVTNDTDVWVFGATKVLRNFNRYKEDVFSPLKKAPQD 200
Query: 951 DRKYVET-YFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEV 1000
++ Y+ T M+ I ++ GL R +L+ +A L+G DY+ G +G+ NA+++
Sbjct: 201 NKDYLVTPVHMEKITENTGLDRNRLVLIATLMGGDYSSGTDRLGLQNAVKI 251
>gi|269986761|gb|EEZ93040.1| XPG I domain protein [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 332
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E+ R + + +ELL G+PY+ AP E EAQ A + + V + D
Sbjct: 111 AEEKAMYMRRLSRIDDYIIDSSKELLSYLGIPYVQAPAEGEAQAAQLNMQGKVFAAASQD 170
Query: 934 SDVFLFGARSVYK--NIFDDRKY----VETYFMQDI------EKDLGLTREKLIRMALLL 981
D LFGA+ V + NI + RK + T + ++ LG+TRE+LI ++L +
Sbjct: 171 YDTLLFGAKKVVRNLNITNKRKISGKGITTSVLPELINANPNLARLGITREQLITLSLFV 230
Query: 982 GSDYTEGISGIGIVNAIEVV 1001
G+DY +G+ GIG A+++V
Sbjct: 231 GTDYNKGVDGIGPKKALKIV 250
>gi|317374936|sp|C6HQJ2.2|FEN1_AJECH RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 29/242 (11%)
Query: 874 GDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDD 933
+E +K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D
Sbjct: 120 AEEVEKFSRRTVRVTREHNEECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASED 179
Query: 934 SDVFLFGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGI 989
D F + + +++ F +++ +E + + +E L + R++ + + +LLG DY + I
Sbjct: 180 MDTLCFDSPILLRHLTFSEQRKEPILEIHLDRVLE-GLDMDRKQFVDLCILLGCDYLDPI 238
Query: 990 SGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVN 1049
+G A++++ + L + E I+S DP K+ + ++ R D DV
Sbjct: 239 PKVGPNTALKLIR---DHGSLEQVVEAIKS-DPK--KKYTIPEDWPYKEARELFFDPDVR 292
Query: 1050 YAKNS----------VGGVSEFDESISQFDEDK---QSAEYSQNMKKIFMDKHTQLRLEA 1096
A + V G+ +F F ED+ +A +N+K Q RLE
Sbjct: 293 NADHPDCDFKWEAPDVEGLVKFLVEEKAFSEDRVRNAAARLQKNLKTA-----QQSRLEG 347
Query: 1097 FY 1098
F+
Sbjct: 348 FF 349
>gi|342320365|gb|EGU12306.1| Hypothetical Protein RTG_01685 [Rhodotorula glutinis ATCC 204091]
Length = 751
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 76/130 (58%), Gaps = 6/130 (4%)
Query: 881 ERNAESVSSEMFAECQELLQMFGLPYIIA----PMEAEAQCAYMELANLVDGVVTDDSDV 936
+ N+ SV + + +E++Q G+P++ P EAE C+ + A LVD V ++D+DV
Sbjct: 384 KHNSFSVPAAALHKSREIIQAMGVPWLQPGPNNPFEAEGVCSALYQAGLVDCVASEDTDV 443
Query: 937 FLFGARSV-YKNIFDDRK-YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
+FGA + Y ++ K + ++ K L LT+E+L+ +ALLLG+D+T I G+G
Sbjct: 444 VVFGAPLLRYATTTENPKNPMNVLDPVELRKQLDLTKEQLVDLALLLGTDFTVRIPGLGP 503
Query: 995 VNAIEVVNAF 1004
V AI ++ +
Sbjct: 504 VAAITLMRRY 513
>gi|154151645|ref|YP_001405263.1| flap endonuclease-1 [Methanoregula boonei 6A8]
gi|166973700|sp|A7IA59.1|FEN_METB6 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|154000197|gb|ABS56620.1| XPG I [Methanoregula boonei 6A8]
Length = 333
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 12/142 (8%)
Query: 874 GDEQKKLE--RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVT 931
GDE++ R+A V + A +ELL + G+PY+ AP E EAQ A+M V+
Sbjct: 113 GDEEEAYRQARSATRVDETIIATSKELLDLLGIPYVQAPSEGEAQAAFMVQRGDARFAVS 172
Query: 932 DDSDVFLFGARSVYKNI-FDDRKYV---------ETYFMQDIEKDLGLTREKLIRMALLL 981
D D LFGA + +N+ ++ + E + ++ L LTRE+L+ + +L+
Sbjct: 173 QDYDTLLFGAPLLMRNLTVSGKRKIRGRAVTVNPERLVLSEVLSGLSLTREQLVEVGILV 232
Query: 982 GSDYTEGISGIGIVNAIEVVNA 1003
G+D+ G +G+G A+++V +
Sbjct: 233 GTDFNPGAAGVGAKTALKIVKS 254
>gi|299751761|ref|XP_001830466.2| hypothetical protein CC1G_07381 [Coprinopsis cinerea okayama7#130]
gi|298409522|gb|EAU91346.2| hypothetical protein CC1G_07381 [Coprinopsis cinerea okayama7#130]
Length = 783
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 20/146 (13%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
++K+ R +S S + +ELL FG+ + AP EAEA+ ++ ++D +++DD D
Sbjct: 69 KEKRGSRMGKSGSHNLSRPFKELLDAFGVEWREAPGEAEAELGHLNNLGIIDAIMSDDCD 128
Query: 936 VFLFGARSVYKNIFD-----------------DRKYVETYFMQDIE--KDLGLTREKLIR 976
F+FGA+ V KN D+ + Y ++DI+ D+GL R L+
Sbjct: 129 SFIFGAKVVIKNKSKELSGNASNPAVNAAGKVDKHHTMVYRIEDIQNDPDIGLKRGGLVL 188
Query: 977 MALLLGSDYTE-GISGIGIVNAIEVV 1001
ALL G DY + G+ IG V A+ +
Sbjct: 189 FALLCGGDYDQKGVRNIGKVAALALA 214
>gi|449706507|gb|EMD46341.1| DNArepair protein, putative, partial [Entamoeba histolytica KU27]
Length = 661
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 14/114 (12%)
Query: 896 QELLQMF---GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDR 952
+ L+QMF +PYIIAP EAEAQC +E L D + T+DSD+F++GA++V N+F
Sbjct: 472 KRLIQMFKEINIPYIIAPGEAEAQCYQLEHDGLCDYIATNDSDIFVYGAKNVITNLFTSS 531
Query: 953 K---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNA 1003
Y + F D L + +L +LL+ SDY+ G +G + A ++ +
Sbjct: 532 HPILYSASTF------DYSLDQIRL--YSLLVPSDYSNGFPNVGPITAKHIITS 577
>gi|183232094|ref|XP_651701.2| DNA-repair protein [Entamoeba histolytica HM-1:IMSS]
gi|169802201|gb|EAL46315.2| DNA-repair protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 660
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 14/114 (12%)
Query: 896 QELLQMF---GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDR 952
+ L+QMF +PYIIAP EAEAQC +E L D + T+DSD+F++GA++V N+F
Sbjct: 471 KRLIQMFKEINIPYIIAPGEAEAQCYQLEHDGLCDYIATNDSDIFVYGAKNVITNLFTSS 530
Query: 953 K---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNA 1003
Y + F D L + +L +LL+ SDY+ G +G + A ++ +
Sbjct: 531 HPILYSASTF------DYSLDQIRL--YSLLVPSDYSNGFPNVGPITAKHIITS 576
>gi|169868548|ref|XP_001840845.1| hypothetical protein CC1G_03074 [Coprinopsis cinerea okayama7#130]
gi|116498003|gb|EAU80898.1| hypothetical protein CC1G_03074 [Coprinopsis cinerea okayama7#130]
Length = 918
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 20/139 (14%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
R S++ +++++ FG + AP EAEA+ AY+ +DG+++DD D FLFGA
Sbjct: 95 RKINKTPSKLIPGMKQIVEAFGFEHRTAPGEAEAELAYLNRIGAIDGILSDDVDNFLFGA 154
Query: 942 RSVYKN------------IF-----DDRKYVETYFMQDI--EKDLGLTREKLIRMALLLG 982
+V +N I DD+ + + M DI +GLTR LI + LL G
Sbjct: 155 TAVIRNPSNTLSGNRSNPILNAAGKDDKNHSWVFKMSDITTHPQVGLTRGGLILIGLLSG 214
Query: 983 SDYTE-GISGIGIVNAIEV 1000
DY + G+ GI A+ +
Sbjct: 215 GDYHQSGVERCGIKTAVAL 233
>gi|400597409|gb|EJP65142.1| DNA repair endonuclease rad2 [Beauveria bassiana ARSEF 2860]
Length = 808
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 10/143 (6%)
Query: 870 YMYLGDEQKKLERNAESVSSEMFAECQ--ELLQMFGLPYIIAPMEAEAQCAYMELANLVD 927
+++ G + +RN S + A Q L+++FGLP + AP EAEA+CA ++ +VD
Sbjct: 76 FVFDGPNKPTTKRNKRSGRGDGVANSQAKRLIRLFGLPALDAPGEAEAECALLQRHGIVD 135
Query: 928 GVVTDDSDVFLFGARSVYKNIFDDRK------YVETYFMQDIEKDLGLTREKLIRMALLL 981
V+++D D +FG +N + K +V Y + GL R+ ++ +AL+
Sbjct: 136 AVLSEDVDTIMFGCTKTLRNWSAEGKTVTVPTHVSLYDTAAVANH-GLDRQGMVLVALMS 194
Query: 982 GSDY-TEGISGIGIVNAIEVVNA 1003
G DY +G+ G G+ A E NA
Sbjct: 195 GGDYLPDGLPGCGVKVACEAANA 217
>gi|17510005|ref|NP_491168.1| Protein CRN-1 [Caenorhabditis elegans]
gi|75023012|sp|Q9N3T2.1|FEN1_CAEEL RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Cell
death-related nuclease 1; AltName: Full=Flap
structure-specific endonuclease 1
gi|31747251|gb|AAP57297.1| cell death-related nuclease 1 [Caenorhabditis elegans]
gi|373220153|emb|CCD72553.1| Protein CRN-1 [Caenorhabditis elegans]
Length = 382
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +K ER V+ + E + LL + G+P + AP EAEAQCA++ A V G VT+D D
Sbjct: 122 EAEKFERRLVKVTKQQNDEAKRLLGLMGIPVVEAPCEAEAQCAHLVKAGKVFGTVTEDMD 181
Query: 936 VFLFGARSVYKNIF---DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
FG+ + ++ + ++ + + +++ L+ E+ I + +LLG DY I G+
Sbjct: 182 ALTFGSTVLLRHFLAPVAKKIPIKEFNLSLALEEMKLSVEEFIDLCILLGCDYCGTIRGV 241
Query: 993 GIVNAIEVV 1001
G A+E++
Sbjct: 242 GPKKAVELI 250
>gi|21227008|ref|NP_632930.1| flap endonuclease-1 [Methanosarcina mazei Go1]
gi|28380015|sp|Q8PYF6.1|FEN_METMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|20905326|gb|AAM30602.1| FLAP endonuclease-1 [Methanosarcina mazei Go1]
Length = 338
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 23/168 (13%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + + V ++ + + LL + G+P+I AP E EAQ A+M L D V + D D FL
Sbjct: 119 KYAQASSKVDQDIIEDSKYLLDIMGIPWIQAPCEGEAQAAHMVLKKDADCVASQDYDSFL 178
Query: 939 FGARSVYKNIFDDRK--------YVETYF-MQDIEK---DLGLTREKLIRMALLLGSDYT 986
FGA +V +N+ K YV+ M ++E+ LG+ R++LI +A+ +G+DY
Sbjct: 179 FGAPTVVRNLAATGKRKLPGKNVYVDVELEMIELEETLDSLGINRDQLIDIAICVGTDYN 238
Query: 987 EGISGIGIVNAIEV------VNAFPEEDG-----LSKFREWIESPDPT 1023
+G+ +G A+++ ++A E G L +E PD T
Sbjct: 239 KGLEKVGPKTALKLIKKHGNIHAVIREKGMEIEALDSIKELFTHPDVT 286
>gi|452209484|ref|YP_007489598.1| Flap structure-specific endonuclease [Methanosarcina mazei Tuc01]
gi|452099386|gb|AGF96326.1| Flap structure-specific endonuclease [Methanosarcina mazei Tuc01]
Length = 338
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 23/168 (13%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + + V ++ + + LL + G+P+I AP E EAQ A+M L D V + D D FL
Sbjct: 119 KYAQASSKVDQDIIEDSKYLLDIMGIPWIQAPCEGEAQAAHMVLKKDADCVASQDYDSFL 178
Query: 939 FGARSVYKNIFDDRK--------YVETYF-MQDIEK---DLGLTREKLIRMALLLGSDYT 986
FGA +V +N+ K YV+ M ++E+ LG+ R++LI +A+ +G+DY
Sbjct: 179 FGAPTVVRNLAATGKRKLPGKNVYVDVELEMIELEETLDSLGINRDQLIDIAICVGTDYN 238
Query: 987 EGISGIGIVNAIEV------VNAFPEEDG-----LSKFREWIESPDPT 1023
+G+ +G A+++ ++A E G L +E PD T
Sbjct: 239 KGLEKVGPKTALKLIKKHGNIHAVLREKGMEIEALDSIKELFTHPDVT 286
>gi|150866877|ref|XP_001386616.2| hypothetical protein PICST_33639 [Scheffersomyces stipitis CBS
6054]
gi|149388133|gb|ABN68587.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 894
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 18/121 (14%)
Query: 895 CQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI--FDD- 951
+ +L + Y+ +P E EAQCA+++ +VD V+++DSDVF+FGA S+ KN F +
Sbjct: 135 IKRILHDLKIDYLQSPGEGEAQCAFLQKFGIVDHVLSNDSDVFVFGATSILKNYSRFQED 194
Query: 952 ---------------RKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVN 996
+ +V M ++ GLT +LI +A L G+DY+ G +G+GI N
Sbjct: 195 LAGSPGKGNAPSPTSKYWVTPISMSRVQNTTGLTLPRLILLASLRGNDYSTGGTGMGIKN 254
Query: 997 A 997
A
Sbjct: 255 A 255
>gi|317374933|sp|C5GPA7.2|FEN1_AJEDR RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|317374934|sp|C5JVG7.2|FEN1_AJEDS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 29/237 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNEECKKLLKLMGVPYINAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F + + +++ F +++ +E + + +E L + R++ + + +LLG DY + I +G
Sbjct: 185 FDSPILLRHLTFSEQRKEPILEIHLDRVLE-GLDMDRKQFVDLCILLGCDYLDPIPKVGP 243
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNS 1054
A++++ + L K E I+S DP K+ + + R D DV A +
Sbjct: 244 NTALKLIR---DHGSLEKVVEAIQS-DPK--KKYTIPEDWPYKDARELFFDPDVRKADHP 297
Query: 1055 ----------VGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
V G+ +F F ED+ +A +N+K Q RLE F+
Sbjct: 298 DCNFKWEAPDVEGLVKFLVEEKAFSEDRVRNGAARLQKNLKTA-----QQSRLEGFF 349
>gi|261193829|ref|XP_002623320.1| DNA-repair protein rad2 [Ajellomyces dermatitidis SLH14081]
gi|239588925|gb|EEQ71568.1| DNA-repair protein rad2 [Ajellomyces dermatitidis SLH14081]
gi|239613756|gb|EEQ90743.1| DNA-repair protein rad2 [Ajellomyces dermatitidis ER-3]
Length = 406
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 29/237 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 136 KFSRRTVRVTREHNEECKKLLKLMGVPYINAPTEAEAQCAVLARAGKVYAAASEDMDTLC 195
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F + + +++ F +++ +E + + +E L + R++ + + +LLG DY + I +G
Sbjct: 196 FDSPILLRHLTFSEQRKEPILEIHLDRVLE-GLDMDRKQFVDLCILLGCDYLDPIPKVGP 254
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNS 1054
A++++ + L K E I+S DP K+ + + R D DV A +
Sbjct: 255 NTALKLIR---DHGSLEKVVEAIQS-DPK--KKYTIPEDWPYKDARELFFDPDVRKADHP 308
Query: 1055 ----------VGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
V G+ +F F ED+ +A +N+K Q RLE F+
Sbjct: 309 DCNFKWEAPDVEGLVKFLVEEKAFSEDRVRNGAARLQKNLKTA-----QQSRLEGFF 360
>gi|327350064|gb|EGE78921.1| DNA-repair protein rad2 [Ajellomyces dermatitidis ATCC 18188]
Length = 402
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 112/237 (47%), Gaps = 29/237 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 132 KFSRRTVRVTREHNEECKKLLKLMGVPYINAPTEAEAQCAVLARAGKVYAAASEDMDTLC 191
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F + + +++ F +++ +E + + +E L + R++ + + +LLG DY + I +G
Sbjct: 192 FDSPILLRHLTFSEQRKEPILEIHLDRVLE-GLDMDRKQFVDLCILLGCDYLDPIPKVGP 250
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNS 1054
A++++ + L K E I+S DP K+ + + R D DV A +
Sbjct: 251 NTALKLIR---DHGSLEKVVEAIQS-DPK--KKYTIPEDWPYKDARELFFDPDVRKADHP 304
Query: 1055 ----------VGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
V G+ +F F ED+ +A +N+K Q RLE F+
Sbjct: 305 DCNFKWEAPDVEGLVKFLVEEKAFSEDRVRNGAARLQKNLKTA-----QQSRLEGFF 356
>gi|326478513|gb|EGE02523.1| flap endonuclease [Trichophyton equinum CBS 127.97]
Length = 353
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 7/147 (4%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AEC+ LL + G+PY+ AP EAEAQCA + A V G ++D D
Sbjct: 121 KFSRRTVRVTREHNAECKRLLGLMGIPYLDAPTEAEAQCAVLAKAGKVFGAASEDMDTLC 180
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F A + +++ F +++ + + + + LG+ + + + +LLG DY + I +G
Sbjct: 181 FAAPVLLRHLTFSEQRKEPILEIHLDKVLEGLGMDMTQFVDLCILLGCDYLDPIPKVGPN 240
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDP 1022
A++++ + L K E IES DP
Sbjct: 241 TALKMIR---DHGTLEKVVEAIES-DP 263
>gi|320582300|gb|EFW96517.1| 5' to 3' exonuclease, 5' flap endonuclease [Ogataea parapolymorpha
DL-1]
Length = 374
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E ++ E+ V+ E + Q LL++ G+PY+IAP EAEAQCA + V ++D
Sbjct: 122 EELQRFEKRQVKVTREQNEQAQHLLRLMGIPYVIAPCEAEAQCAELARKGKVYAAASEDM 181
Query: 935 DVFLFGARSVYKNIF---DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D + +N+ + V+ + + + G+ + + +LLG DY E I G
Sbjct: 182 DTLCYQPPFFLRNVTAAESKKLKVDEFTTSAVLEGFGMDINTFVDLCILLGCDYCETIKG 241
Query: 992 IGIVNAIEVVNAFPEEDGLSKFREWIESPDP 1022
IG V A +++ E + K E+IE+ DP
Sbjct: 242 IGPVTAFKLIK---EHGSIEKIIEFIEN-DP 268
>gi|190345050|gb|EDK36862.2| hypothetical protein PGUG_00960 [Meyerozyma guilliermondii ATCC 6260]
Length = 338
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 32/243 (13%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E + E+ + V+ E E ++LL++ G+PY+ AP EAEAQCA + +A V ++D
Sbjct: 86 EEMVRYEKRSVRVTKEQNNEAKKLLELMGIPYVDAPCEAEAQCAELAVAGKVFAAASEDM 145
Query: 935 DVFLFGARSVYKNI---------FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
D + + +++ D Y + M+ +E D ++ I + +LLG DY
Sbjct: 146 DTLCYSPPYLLRHLTFAEARKMPIDQIDYKKA--MEGLEMD----KQTFIDLCILLGCDY 199
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREWI-ESPDPTILGKFDVQTGASSRKRRSSDG 1044
E I G+G V A +++ E L +WI E+PD T KF V + R
Sbjct: 200 CETIKGVGPVTAFKLIK---EHGSLDNIVKWIEENPDST---KFKVPENWPYAEARELFL 253
Query: 1045 DKDVN--------YAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEA 1096
+ DV+ + + V + EF F ED+ + ++ +KK + Q RL+
Sbjct: 254 NPDVSPGKEINLKWQEPKVDELVEFMVKQKGFSEDRVRSG-AEKLKK-GLKGGVQGRLDG 311
Query: 1097 FYT 1099
F++
Sbjct: 312 FFS 314
>gi|358398186|gb|EHK47544.1| hypothetical protein TRIATDRAFT_263039 [Trichoderma atroviride IMI
206040]
Length = 812
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 9/143 (6%)
Query: 870 YMYLGDEQKKLERNAESVSSEMF--AECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 927
+++ G + K +RN S + F A + L+++FG AP EAEA+CA+++ +VD
Sbjct: 76 FVFDGPNKPKFKRNRRSGRGDGFSAAHAKRLIRLFGFIAHDAPGEAEAECAFLQKNGVVD 135
Query: 928 GVVTDDSDVFLFGARSVYKNIFDDRK-----YVETYFMQDIE-KDLGLTREKLIRMALLL 981
V+++D D +FG KN + K ++ Y + ++ LGL RE ++ +A++
Sbjct: 136 AVLSEDVDTIMFGCTRTMKNWSAEGKGTRPTHISMYDVDELNLASLGLDREGMVLVAIMS 195
Query: 982 GSDYT-EGISGIGIVNAIEVVNA 1003
G DY EG+ G G A E A
Sbjct: 196 GGDYIPEGVPGCGPKVACEAAKA 218
>gi|317376215|sp|A5DCF5.3|FEN1_PICGU RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 374
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 32/243 (13%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E + E+ + V+ E E ++LL++ G+PY+ AP EAEAQCA + +A V ++D
Sbjct: 122 EEMVRYEKRSVRVTKEQNNEAKKLLELMGIPYVDAPCEAEAQCAELAVAGKVFAAASEDM 181
Query: 935 DVFLFGARSVYKNI---------FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
D + + +++ D Y + M+ +E D ++ I + +LLG DY
Sbjct: 182 DTLCYSPPYLLRHLTFAEARKMPIDQIDYKKA--MEGLEMD----KQTFIDLCILLGCDY 235
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREWI-ESPDPTILGKFDVQTGASSRKRRSSDG 1044
E I G+G V A +++ E L +WI E+PD T KF V + R
Sbjct: 236 CETIKGVGPVTAFKLIK---EHGSLDNIVKWIEENPDST---KFKVPENWPYAEARELFL 289
Query: 1045 DKDVN--------YAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEA 1096
+ DV+ + + V + EF F ED+ + ++ +KK + Q RL+
Sbjct: 290 NPDVSPGKEINLKWQEPKVDELVEFMVKQKGFSEDRVRSG-AEKLKK-GLKGGVQGRLDG 347
Query: 1097 FYT 1099
F++
Sbjct: 348 FFS 350
>gi|398396234|ref|XP_003851575.1| hypothetical protein MYCGRDRAFT_100567 [Zymoseptoria tritici IPO323]
gi|339471455|gb|EGP86551.1| hypothetical protein MYCGRDRAFT_100567 [Zymoseptoria tritici IPO323]
Length = 393
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 107/238 (44%), Gaps = 23/238 (9%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AE Q LL++ G+PYIIAP EAEAQCA + V ++D D
Sbjct: 125 KFSRRTVRVTREHNAEAQRLLKLMGIPYIIAPTEAEAQCAVLARGGKVFAAASEDMDTLT 184
Query: 939 FGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + + + + F +++ V+ + + + L + + + I +LLG DY + + GIG
Sbjct: 185 FASPVLVRKLTFAEQRKEPVQEIHLDRVLEGLEMDQTQFIDFCILLGCDYLDPVKGIGPK 244
Query: 996 NAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDV----------QTGASSRKRRSSDGD 1045
+A+ ++ E L +IE GK+ + Q R++ + +
Sbjct: 245 SALALIK---EHKTLENVVVYIEKS-----GKYTLPEDWPYQDARQLFLEPDVRQADEPE 296
Query: 1046 KDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAFYTFNER 1103
+ + V G+ +F F ED+ + S+ K + Q RLE F+ E+
Sbjct: 297 CEFKWEAPDVDGLVKFLVEEKGFSEDRVRSGASRLQKN--LKSGQQSRLEGFFKVQEK 352
>gi|389637772|ref|XP_003716519.1| DNA-repair protein rad2 [Magnaporthe oryzae 70-15]
gi|317374924|sp|A4QS18.2|FEN1_MAGO7 RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|351642338|gb|EHA50200.1| DNA-repair protein rad2 [Magnaporthe oryzae 70-15]
Length = 394
Score = 74.7 bits (182), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E EC++LL++ G+PYIIAP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNEECRQLLKLMGIPYIIAPTEAEAQCAVLARAGKVFAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDD--RKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
F + + +++ F + ++ ++ + + + L + R++ + + +LLG DY + I +G
Sbjct: 185 FDSPILLRHLTFSEARKEPIQEIHVDKVLEGLDMDRKQFVDLCILLGCDYLDPIPKVGPS 244
Query: 996 NAIEVVN 1002
A++++
Sbjct: 245 TALKLIR 251
>gi|226478114|emb|CAX72750.1| Flap endonuclease 1 [Schistosoma japonicum]
Length = 389
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 73/122 (59%), Gaps = 3/122 (2%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI-FDD- 951
+C++LL++ G+P++ AP EAEAQCA + + V V T+D D FG + +++ F +
Sbjct: 140 DCKQLLRLMGVPFVNAPGEAEAQCAALAKSGKVYAVGTEDMDALAFGTPVLLRHLTFSEA 199
Query: 952 -RKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL 1010
+ ++ + + + + L LT ++ + + +LLG DY + I GIG A+++++ + D +
Sbjct: 200 RKMAIQEFNLASVLEGLSLTMDQFVDLCILLGCDYVDTIRGIGPKKALDLLHKYHSIDCV 259
Query: 1011 SK 1012
K
Sbjct: 260 LK 261
>gi|443720454|gb|ELU10206.1| hypothetical protein CAPTEDRAFT_21886 [Capitella teleta]
Length = 377
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 20/163 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K + V+ E EC++LL + G+P++ AP EAEAQCA + V T+D D
Sbjct: 125 KFSKRLVKVTKEHNEECKQLLGLMGIPFVEAPCEAEAQCASLVKGGHVYATGTEDMDALT 184
Query: 939 FGARSVYKNI-FDD-RKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
FG+ + +++ F + RK ++ + ++ + L L+ E+ I + +LLG DY + I GIG
Sbjct: 185 FGSTVLLRHLTFSEARKMPIKEFSLEKVLAGLELSYEEFIDLCILLGCDYCDSIRGIGPK 244
Query: 996 NAIEVVN-----------------AFPEEDGLSKFREWIESPD 1021
A++++ PE+ + RE + PD
Sbjct: 245 RAVDLIKQHRSIEAVLKNIDTKKYTIPEDWPFEQARELFKQPD 287
>gi|50310391|ref|XP_455215.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605424|sp|Q6CLH4.1|FEN1_KLULA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|49644351|emb|CAG97923.1| KLLA0F02992p [Kluyveromyces lactis]
Length = 381
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K ER V E Q+LL + G+PY++AP EAEAQCA + + V ++D D
Sbjct: 123 KHERRLVKVLPWHNEEAQKLLSLMGIPYVVAPAEAEAQCAELAKSGKVFAAASEDMDTLC 182
Query: 939 FGARSVYKNI-FDD-RKYVETYFMQD-IEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
+ + +++ F + RK F D I L LT+ + I + ++LG DY EGI G+G V
Sbjct: 183 YQTPVLLRHLTFSEARKLPIQEFDTDVIYNTLDLTQTQFIDLGIILGCDYCEGIKGVGPV 242
Query: 996 NAIEVVN 1002
NA++++
Sbjct: 243 NALKLIK 249
>gi|156094601|ref|XP_001613337.1| flap exonuclease [Plasmodium vivax Sal-1]
gi|317376189|sp|A5KAL1.1|FEN1_PLAVS RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|148802211|gb|EDL43610.1| flap exonuclease, putative [Plasmodium vivax]
Length = 623
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDD-- 951
E ++LL + G+P + AP EAE+QCA++ NL T+D+D +FG + + +N+ +
Sbjct: 142 EAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIRNLNANAS 201
Query: 952 ------------RKYVETYF-MQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAI 998
R Y+ T ++ + K L L+ + I +L G DY + I GIG A
Sbjct: 202 SANQNKNKNSSKRGYILTEINLEQVLKGLNLSMNEFIDFCILCGCDYCDTIKGIGSKTAY 261
Query: 999 EVVNAF 1004
++ +
Sbjct: 262 NLIKEY 267
>gi|359487708|ref|XP_002278964.2| PREDICTED: flap endonuclease 1-like [Vitis vinifera]
Length = 384
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 74/130 (56%), Gaps = 3/130 (2%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + V+ + +C++LL++ G+P I AP EAEAQCA + + V V ++D
Sbjct: 122 EEIEKFSKRTVKVTKQHNEDCKKLLRLMGVPVIEAPSEAEAQCAALCKSGKVYAVASEDM 181
Query: 935 DVFLFGARSVYKNIFD--DRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D FGA +++ D RK V + + I ++L LT ++ I + +L G DY + I G
Sbjct: 182 DSLTFGAPKFLRHLMDPSSRKIPVMEFDITKILEELNLTMDQFIDLCILSGCDYCDSIRG 241
Query: 992 IGIVNAIEVV 1001
IG A++++
Sbjct: 242 IGGQTALKLI 251
>gi|451854672|gb|EMD67964.1| hypothetical protein COCSADRAFT_187007 [Cochliobolus sativus ND90Pr]
Length = 934
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 870 YMYLGDEQKKLERN---AESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+++ G + +RN +V+S ++LL+ FG P +AP EAEA+CA ++ +V
Sbjct: 81 FVFDGPNKPPFKRNKRTGPTVASIPEFLAKQLLKQFGYPIHLAPGEAEAECALLQREGIV 140
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRK-----YVETY-FMQDIEKDLGLTREKLIRMALL 980
D V+++D D +FG+ +N ++ +V Y ++ GL RE +I +AL+
Sbjct: 141 DAVLSEDVDTLMFGSGVTLRNWSPEKSGKTPTHVNVYDAVETKNGPSGLDREGMILVALM 200
Query: 981 LGSDYT-EGISGIGIVNAIEVVNA 1003
G DY EGI G G A E A
Sbjct: 201 SGGDYVPEGIPGCGPKTACEAAKA 224
>gi|146423306|ref|XP_001487583.1| hypothetical protein PGUG_00960 [Meyerozyma guilliermondii ATCC 6260]
Length = 338
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 114/243 (46%), Gaps = 32/243 (13%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E + E+ + V+ E E ++LL++ G+PY+ AP EAEAQCA + +A V ++D
Sbjct: 86 EEMVRYEKRSVRVTKEQNNEAKKLLELMGIPYVDAPCEAEAQCAELAVAGKVFAAASEDM 145
Query: 935 DVFLFGARSVYKNI---------FDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDY 985
D + + +++ D Y + M+ +E D ++ I + +LLG DY
Sbjct: 146 DTLCYSPPYLLRHLTFAEARKMPIDQIDYKKA--MEGLEMD----KQTFIDLCILLGCDY 199
Query: 986 TEGISGIGIVNAIEVVNAFPEEDGLSKFREWI-ESPDPTILGKFDVQTGASSRKRRSSDG 1044
E I G+G V A +++ E L +WI E+PD T KF V + R
Sbjct: 200 CETIKGVGPVTAFKLIK---EHGSLDNIVKWIEENPDST---KFKVPENWPYAEARELFL 253
Query: 1045 DKDVN--------YAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEA 1096
+ DV+ + + V + EF F ED+ + ++ +KK + Q RL+
Sbjct: 254 NPDVSPGKEINLKWQEPKVDELVEFMVKQKGFSEDRVRSG-AEKLKK-GLKGGVQGRLDG 311
Query: 1097 FYT 1099
F++
Sbjct: 312 FFS 314
>gi|397588883|gb|EJK54438.1| hypothetical protein THAOC_25932, partial [Thalassiosira oceanica]
Length = 880
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Query: 903 GLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA-RSVYKNIFDDRKYVETYFMQ 961
G+P+++AP EA+AQ A + VD V+T+DSD+ ++G R +YK F + E M+
Sbjct: 346 GIPFLVAPYEADAQMARLAHTGAVDLVITEDSDMLVYGCPRVLYKADFKTGQGQEIQLMR 405
Query: 962 DIEKDLG-----LTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
D+ +++ T + + MA+L G DY +G+ GIGI A ++V
Sbjct: 406 DLGENVSPSFRNFTHDMFVFMAILSGCDYCKGVPGIGIKLAHKLV 450
>gi|146419215|ref|XP_001485571.1| hypothetical protein PGUG_01242 [Meyerozyma guilliermondii ATCC 6260]
Length = 632
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 16/111 (14%)
Query: 906 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKN-------IF--------D 950
Y+ AP EAEA+CA ++ +VD VVT+D+DV++FGA V +N +F D
Sbjct: 141 YVRAPGEAEAECAMLQRCGVVDYVVTNDTDVWVFGATKVLRNFNRYKEDVFSPLKKAPQD 200
Query: 951 DRKYVET-YFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEV 1000
++ Y+ T M+ I ++ GL R +L+ +A L+G DY+ G +G+ NA+++
Sbjct: 201 NKDYLVTPVHMEKITENTGLDRNRLVLIATLMGGDYSSGTDRLGLQNAVKI 251
>gi|255713324|ref|XP_002552944.1| KLTH0D05126p [Lachancea thermotolerans]
gi|317374904|sp|C5DGG4.1|FEN1_LACTC RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|238934324|emb|CAR22506.1| KLTH0D05126p [Lachancea thermotolerans CBS 6340]
Length = 385
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER V+ E E ++LL++ GLPY+ AP EAEAQCA + A V ++D D
Sbjct: 120 EKLKHERRLVKVTPEHNEEAKKLLRLMGLPYVEAPCEAEAQCAELAKAGKVYAAASEDMD 179
Query: 936 VFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ F + K + + + + L L+ E+ I + ++LG DY + I G+
Sbjct: 180 TLCYRTPFLLRHLTFSEAKKEPIHEINTEILLQGLELSIEQFIDLGIMLGCDYCDSIRGV 239
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIES 1019
G V A++++ E L E+IES
Sbjct: 240 GPVTALKLIK---EHKTLENIVEYIES 263
>gi|397642742|gb|EJK75426.1| hypothetical protein THAOC_02851 [Thalassiosira oceanica]
Length = 704
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 844 TKAIENVHAEATEKILEEE---MQILDHEYMYL--GDEQKKLERNAESVSSEMFA---EC 895
+ ++++HA+ ++ + +L +++ G + L + A S + C
Sbjct: 113 STVLDSLHADPAVHLVYNRTVSLLLLGFRLVFVMEGKRRSSLGQTASRGGSHFMSTSRRC 172
Query: 896 QELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYV 955
E+L++ G+ + A E E CA + +VDGVV+ D D FL+GAR +YK D
Sbjct: 173 GEVLRLLGVTVLEAEAEGEQLCALLNSRGIVDGVVSSDGDAFLYGARVIYKGFTMDNLTK 232
Query: 956 ETYFMQDIEK--------DLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEE 1007
+ D + + L+RE L+ A L GSD +G+ +G A + A PE
Sbjct: 233 GSVLKYDANELRVASSHGNFPLSREDLVAFAALSGSDVFQGVQHLGWKKASMFLGACPEG 292
Query: 1008 DGLSKFREWIES 1019
L W ES
Sbjct: 293 KSLDTLLGWSES 304
>gi|366994432|ref|XP_003676980.1| hypothetical protein NCAS_0F01410 [Naumovozyma castellii CBS 4309]
gi|342302848|emb|CCC70625.1| hypothetical protein NCAS_0F01410 [Naumovozyma castellii CBS 4309]
Length = 379
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 80/147 (54%), Gaps = 6/147 (4%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E+ K ER VS E E ++LL++ G+PY+ AP EAE+QCA + V ++D D
Sbjct: 120 EKMKQERRLVKVSKEHNDEAKKLLELMGIPYVNAPGEAESQCAELAKKGKVYAAASEDMD 179
Query: 936 VFLFGARSVYKNI-FDDRKY--VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGI 992
+ + +++ F + K ++ + + + L LT E+ I + ++LG DY + I G+
Sbjct: 180 TLCYRTPYLLRHLTFSEAKKEPIQEINTEQVLQGLDLTLEQFIDLGIMLGCDYCDNIRGV 239
Query: 993 GIVNAIEVVNAFPEEDGLSKFREWIES 1019
G V A++++ E L K E+IES
Sbjct: 240 GPVTALKLIK---EHGSLEKIVEFIES 263
>gi|449016220|dbj|BAM79622.1| probable flap structure-specific endonuclease 1 [Cyanidioschyzon
merolae strain 10D]
Length = 380
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R VS+E + LL++ G+P + AP EAEAQCA + A L ++D D
Sbjct: 126 KYARRVNKVSAETIDNVKRLLRLMGIPVVEAPSEAEAQCAVLTRAGLAYATASEDMDALT 185
Query: 939 FGARSVYKNIF---------DDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGI 989
FG + +N+F DRK E +E DLG++ ++ I + +L G DYT I
Sbjct: 186 FGTPLLIRNLFAALASGAERKDRKPSEFSLAITLE-DLGISMDQFIDICILCGCDYTCTI 244
Query: 990 SGIGIVNAIEVV 1001
IG A+ +V
Sbjct: 245 PKIGPYRALMLV 256
>gi|15897130|ref|NP_341735.1| flap endonuclease-1 [Sulfolobus solfataricus P2]
gi|284174372|ref|ZP_06388341.1| flap endonuclease-1 [Sulfolobus solfataricus 98/2]
gi|25310048|pir||F90158 DNA repair endo/exonuclease FEN-1 (RAD2) (rad2) [imported] -
Sulfolobus solfataricus
gi|13813313|gb|AAK40525.1| DNA repair endo/exonuclease FEN-1 (RAD2) (rad2) [Sulfolobus
solfataricus P2]
Length = 302
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + +S+ M E ++LL+ G+P + AP E EA+ AY+ L + D
Sbjct: 68 EELRKYSQAILRLSNIMVEESKKLLRAMGIPIVQAPSEGEAEAAYLNKLGLSWAAASQDY 127
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA+ + +N I RK YVE + + K LG+TRE+LI + +L+G
Sbjct: 128 DAILFGAKRLVRNLTITGKRKLPNKDVYVEIKPELIETEILLKKLGITREQLIDIGILIG 187
Query: 983 SDYT-EGISGIGIVNAIEVVNAF 1004
+DY +GI GIG A++++ +
Sbjct: 188 TDYNPDGIRGIGPERALKIIKKY 210
>gi|222445719|ref|ZP_03608234.1| hypothetical protein METSMIALI_01361 [Methanobrevibacter smithii DSM
2375]
gi|222435284|gb|EEE42449.1| XPG I-region [Methanobrevibacter smithii DSM 2375]
Length = 187
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 901 MFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKY--VETY 958
M G+PYI A E EAQ AY+ V + D D LFGA+ V +N+ + +E Y
Sbjct: 1 MMGIPYIEAYGEGEAQAAYLVENGDAWAVASQDYDCLLFGAKRVVRNLAINSNLGNLEYY 60
Query: 959 FMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFRE 1015
++ + +L + RE+LI M +L+G+D++EG+ G+G A+++ E+ L+K +E
Sbjct: 61 NLKRVLDELDINREQLIDMGILIGTDFSEGLKGVGAKTALKLAKKGELENKLAKLQE 117
>gi|347522663|ref|YP_004780233.1| flap structure-specific endonuclease [Pyrolobus fumarii 1A]
gi|343459545|gb|AEM37981.1| flap structure-specific endonuclease [Pyrolobus fumarii 1A]
Length = 350
Score = 74.7 bits (182), Expect = 4e-10, Method: Composition-based stats.
Identities = 56/175 (32%), Positives = 92/175 (52%), Gaps = 16/175 (9%)
Query: 847 IENVHAEATEKILEEEMQILDHEYMYLGDEQ--KKLERNAESVSSEMFAECQELLQMFGL 904
I+++ E +K+ E + + E + GD + ++ + A ++ +M E + LL G+
Sbjct: 89 IKSIEIERRKKVKSEAAKKYE-EAIKKGDLEAARRYAQMASRLTEDMVKEAKRLLDAMGV 147
Query: 905 PYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKN--IFDDRK------YVE 956
P++ AP + EAQ AYM V + D D LFGA + +N I RK YVE
Sbjct: 148 PWVQAPADGEAQAAYMARKGDVWAAASQDYDALLFGAPRLVRNLTITGRRKLPKKDVYVE 207
Query: 957 T----YFMQDIEKDLGLTREKLIRMALLLGSDYT-EGISGIGIVNAIEVVNAFPE 1006
+ + K LG+TRE+LI + +L+G+DY +G+ GIG A+ +V A P+
Sbjct: 208 IKPELIELDKLLKALGITREQLIVIGILVGTDYNPDGVRGIGPKTALRMVKAQPD 262
>gi|396498478|ref|XP_003845243.1| similar to flap structure-specific endonuclease [Leptosphaeria
maculans JN3]
gi|312221824|emb|CBY01764.1| similar to flap structure-specific endonuclease [Leptosphaeria
maculans JN3]
Length = 935
Score = 74.7 bits (182), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 10/144 (6%)
Query: 870 YMYLGDEQKKLERNAES---VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+++ G + +RN + V+S ++LL+ FG P +AP EAEA+CA ++ +V
Sbjct: 76 FVFDGPNKPPFKRNKRTGPNVASIPEFLAKQLLKQFGFPIHLAPGEAEAECALLQREGIV 135
Query: 927 DGVVTDDSDVFLFGARSVYKNIFDDRK-----YVETY-FMQDIEKDLGLTREKLIRMALL 980
D V+++D D +FG+ +N ++ +V Y ++ GL RE +I +AL+
Sbjct: 136 DAVLSEDVDTLMFGSGITLRNWSPEKSGNTPTHVNVYDAIETKNGPSGLDREGMILVALM 195
Query: 981 LGSDYT-EGISGIGIVNAIEVVNA 1003
G DY EGI G G A E A
Sbjct: 196 SGGDYVPEGIPGCGPKTACEAAKA 219
>gi|156843134|ref|XP_001644636.1| hypothetical protein Kpol_526p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156115283|gb|EDO16778.1| hypothetical protein Kpol_526p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 487
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
V+ EM + Q+ + YI+AP EA+AQ Y+E N+V G++++DSD+ +FG R +
Sbjct: 125 VTPEMAKCVMDYCQIHHIDYIVAPFEADAQMVYLEKQNIVQGIISEDSDLLIFGCRRLIT 184
Query: 947 NIFDDRKYVETYF--MQDIEKDLG---LTREKLIRMALLLGSDYTEGISGIGIVNAIEVV 1001
+ D + +E + K L+ E + M L G DYT GI IG+V AI++V
Sbjct: 185 KLNDFGECIEICKDDFNKLPKKFPLHELSEEGIKTMVCLSGCDYTNGIPRIGLVKAIKLV 244
Query: 1002 NAFPEEDGL 1010
+ + D +
Sbjct: 245 HQYRNIDKI 253
>gi|440136378|gb|AGB85040.1| hypothetical protein CHLPROCp011, partial [Auxenochlorella
protothecoides]
Length = 105
Score = 74.3 bits (181), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/58 (58%), Positives = 44/58 (75%)
Query: 967 LGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTI 1024
LGL+R + I +ALLLGSDYT G+ GIGIVNA EVV+AF +GL FR W+++PD +
Sbjct: 1 LGLSRPEFISLALLLGSDYTPGVRGIGIVNATEVVHAFQGMEGLQDFRAWVQAPDAAV 58
>gi|448526873|ref|XP_003869406.1| hypothetical protein CORT_0D04310 [Candida orthopsilosis Co 90-125]
gi|380353759|emb|CCG23271.1| hypothetical protein CORT_0D04310 [Candida orthopsilosis]
Length = 382
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 18/236 (7%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
DE K E+ V + E ++LL++ G+PY+ AP EAEAQCA + V ++D
Sbjct: 122 DEVMKYEKRLVRVGRDQNDEAKKLLELMGIPYVNAPCEAEAQCAELARGGKVFAAASEDM 181
Query: 935 DVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
D + + +++ + RK ++ + + LG+ +E+ I + +LLG DY E I G
Sbjct: 182 DTLCYEPPYLLRHLTFAEARKMPIDQITYSEAMEGLGMPKEQFIDLCILLGCDYCETIKG 241
Query: 992 IGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRS--------SD 1043
+G V A +++ D L ++ + ++PD T KF V ++ R
Sbjct: 242 VGPVTAYKLIKEHGSLDNLVEYLQ--KNPDKT---KFKVPENWPYKEARELFLHPEVIEA 296
Query: 1044 GDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHTQLRLEAFYT 1099
+ ++ + + V G+ E+ F ED+ + ++ +KK + Q RL+ F+T
Sbjct: 297 TEVELKWKEPDVDGLIEYMVKQKGFSEDRIRSG-AEKLKK-GLKGGVQGRLDGFFT 350
>gi|322700750|gb|EFY92503.1| DNA-repair protein rad2 [Metarhizium acridum CQMa 102]
Length = 426
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 112/268 (41%), Gaps = 60/268 (22%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E AECQ LL++ G+P+IIAP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNAECQRLLKLMGIPFIIAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRK----------------------------------YVETYFMQDI 963
F + +++ F +++ Y + F++ +
Sbjct: 185 FNTPILLRHLTFSEQRKEPIQEIHLDKVLEGLNMERSQVSFPTSKIEILGYYDGKFVR-L 243
Query: 964 EKDLGLTREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPT 1023
K L L + K + + +LLG DY + + IG A++++ E L K + IE DP
Sbjct: 244 TKALRLQKTKFVDLCILLGCDYLDPVPKIGPTTALKLIR---EHGTLEKVVDAIER-DPK 299
Query: 1024 ILGKFDVQTGASSRK----------RRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDK- 1072
K+ + + R++ D D + K V G+ F + F ED+
Sbjct: 300 --KKYTLPEDWPYKDARDLFFEPDVRKADDPLCDFKWDKPDVEGLVTFLVTEKGFSEDRV 357
Query: 1073 --QSAEYSQNMKKIFMDKHTQLRLEAFY 1098
+A +N+K Q RLE F+
Sbjct: 358 RGAAARLEKNLK-----TSQQARLEGFF 380
>gi|409044610|gb|EKM54091.1| hypothetical protein PHACADRAFT_185071 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1025
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 22/146 (15%)
Query: 870 YMYLGDEQKKLERNA---ESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLV 926
+++ G E+ L+R + +S + + E + +++ FG+ + +A EAEA+ AY+ ++
Sbjct: 87 FVFDGRERPTLKRGSRVGKSGTHNLTQEFKAMIECFGMEWRMARGEAEAELAYLNAQGII 146
Query: 927 DGVVTDDSDVFLFGARSVYKN----IFDDRKYVET------------YFMQD---IEKDL 967
D ++TDD D +FGAR+V +N + +R T F D ++
Sbjct: 147 DAIITDDVDTLVFGARTVIRNSSITLAGNRNNPATDALGQKSDQHTMVFTSDRIGSHPNI 206
Query: 968 GLTREKLIRMALLLGSDYTEGISGIG 993
GLTR ++ +ALL G DY G+ G+G
Sbjct: 207 GLTRGGMVLIALLSGGDYDNGVKGLG 232
>gi|258573689|ref|XP_002541026.1| DNA-repair protein rad2 [Uncinocarpus reesii 1704]
gi|237901292|gb|EEP75693.1| DNA-repair protein rad2 [Uncinocarpus reesii 1704]
Length = 413
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 29/237 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 143 KFSRRTVRVTREHNEECKKLLKLMGIPYINAPTEAEAQCAVLARAGKVYAAASEDMDTLC 202
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F + + +++ F +++ +E + + +E LG+ R+ + + +LLG DY + I +G
Sbjct: 203 FDSPILLRHLTFSEQRKEPILEIHLDRVLE-GLGMDRKTFVDLCILLGCDYLDPIPKVGP 261
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNS 1054
A++++ + L K E +++ DP K+ + + R + DV A +
Sbjct: 262 NTALKLIR---DHGSLEKVVEAMKN-DPK--QKYTIPDDWPYEQARDLFFEPDVRPADHP 315
Query: 1055 ----------VGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
V G+ +F F ED+ +A +NMK Q RLE F+
Sbjct: 316 ECDFKWEAPDVEGLVKFLVEGKGFSEDRVRSGAARLQKNMKTA-----QQSRLEGFF 367
>gi|28380021|sp|Q980U8.2|FEN_SULSO RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 349
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + +S+ M E ++LL+ G+P + AP E EA+ AY+ L + D
Sbjct: 115 EELRKYSQAILRLSNIMVEESKKLLRAMGIPIVQAPSEGEAEAAYLNKLGLSWAAASQDY 174
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA+ + +N I RK YVE + + K LG+TRE+LI + +L+G
Sbjct: 175 DAILFGAKRLVRNLTITGKRKLPNKDVYVEIKPELIETEILLKKLGITREQLIDIGILIG 234
Query: 983 SDYT-EGISGIGIVNAIEVVNAF 1004
+DY +GI GIG A++++ +
Sbjct: 235 TDYNPDGIRGIGPERALKIIKKY 257
>gi|170593271|ref|XP_001901388.1| Flap endonuclease-1 [Brugia malayi]
gi|317374878|sp|A8QCH0.1|FEN1_BRUMA RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
gi|158591455|gb|EDP30068.1| Flap endonuclease-1, putative [Brugia malayi]
Length = 378
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Query: 873 LGDEQK--KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVV 930
LGDE K E+ V+ E E + L+ + G+P + AP EAEAQCA + A V V
Sbjct: 117 LGDETSVNKFEKRLVKVTKEQSEEAKRLVTLMGIPVLDAPCEAEAQCAALAKAGKVFATV 176
Query: 931 TDDSDVFLFGARSVYKNIF--DDRKY-VETYFMQDIEKDLGLTREKLIRMALLLGSDYTE 987
++D D FG+ + + + + +K V+ + + KD G+ + + + +LLG DY
Sbjct: 177 SEDMDALTFGSPILLRQMIASEAKKLPVKEMNLNQVLKDFGMNMGQFVDLCILLGCDYVS 236
Query: 988 GISGIGIVNAIEVVNAF 1004
I GIG A E++ +
Sbjct: 237 TIRGIGPKKAFELIKKY 253
>gi|389582194|dbj|GAB64749.1| flap exonuclease [Plasmodium cynomolgi strain B]
Length = 624
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
V+ + E ++LL + G+P + AP EAE+QCA++ NL T+D+D +FG + + +
Sbjct: 135 VTKKQNEEAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIR 194
Query: 947 NIFDD--------------RKYVETYF-MQDIEKDLGLTREKLIRMALLLGSDYTEGISG 991
N+ + R Y+ T ++ + K L L+ + I +L G DY + I G
Sbjct: 195 NLNANASSANQNKNKNSSKRGYILTEINLEQVLKGLNLSMNEFIDFCILCGCDYCDTIKG 254
Query: 992 IGIVNAIEVVNAF 1004
IG A ++ +
Sbjct: 255 IGSKTAYNLIKEY 267
>gi|322707737|gb|EFY99315.1| putative DNA repair endonuclease rad2 [Metarhizium anisopliae ARSEF
23]
Length = 480
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 870 YMYLGDEQKKLERNAESVSSE--MFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 927
+++ G + +RN S + A + L+++FG P AP E EA+CA ++ +VD
Sbjct: 31 FVFDGSNKPIFKRNKRSGRGDGATTAAAKHLIRLFGFPIHDAPGEGEAECALLQRHGIVD 90
Query: 928 GVVTDDSDVFLFGARSVYKNIFDDRK------YVETYFMQDIE-KDLGLTREKLIRMALL 980
V+++D D +FG +N + K +V Y ++D+ DLGL RE ++ +AL+
Sbjct: 91 AVLSEDVDTIMFGCTKTLRNWSSEGKTSTAPTHVSLYDVEDMALGDLGLDREGMVLVALM 150
Query: 981 LGSDYT-EGISGIGIVNAIEVVNA 1003
G DY +G+ G G+ A E A
Sbjct: 151 SGGDYLPDGVPGCGVKVACEAAKA 174
>gi|170097587|ref|XP_001880013.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164645416|gb|EDR09664.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 853
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 74/140 (52%), Gaps = 21/140 (15%)
Query: 870 YMYLGDEQKKLERNAE--SVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 927
+++ G ++ ++R + S ++ ++++ FG I AP EAEA+ AY+ ++D
Sbjct: 81 FVFDGPKRPDVKRGKKINKTSHKLIPGMKQIVDAFGFECITAPGEAEAELAYLNHIGVID 140
Query: 928 GVVTDDSDVFLFGARSVYKNIF-----------------DDRKYVETYFMQDIEK--DLG 968
G+++DD D FLFGA++V +N DD+ + Y + DI + D+
Sbjct: 141 GILSDDVDNFLFGAKTVIRNPSNSLSGNKSNPSLNSAGKDDKNHTRVYRLADINQNPDVL 200
Query: 969 LTREKLIRMALLLGSDYTEG 988
LTR +I + L+ G DY +G
Sbjct: 201 LTRGGMILIGLMSGGDYQQG 220
>gi|448499403|ref|ZP_21611330.1| flap endonuclease-1 [Halorubrum coriense DSM 10284]
gi|445697358|gb|ELZ49423.1| flap endonuclease-1 [Halorubrum coriense DSM 10284]
Length = 325
Score = 74.3 bits (181), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +LE + ++ + +ELL++ +P + AP E EAQCA M A VD ++D D
Sbjct: 118 EAARLEARTQRLTDTIQETTRELLELLDVPVVEAPAEGEAQCAQMAAAGTVDHAGSEDYD 177
Query: 936 VFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
LFGA + + + + E + DLGL R+ L+ +A+L G+D+ EG+ G+G
Sbjct: 178 TLLFGAPTTLRQL-TSKGDPELMDLAATLSDLGLDRQGLVDVAMLCGTDFNEGVRGVGPK 236
Query: 996 NAIEVV 1001
A++ V
Sbjct: 237 TAVKAV 242
>gi|340966712|gb|EGS22219.1| 5'->3' double-stranded DNA exonuclease-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 743
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 14/144 (9%)
Query: 882 RNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA 941
+ A V+ EM E L+ +PY++AP EA+AQ Y+E ++ G+V++DSD+ +FGA
Sbjct: 120 QKAIDVTPEMARHLIEELKKEDVPYVVAPYEADAQLVYLERKGIISGIVSEDSDLLVFGA 179
Query: 942 RSVYKNIFDDRKYVETYFMQDIEKDLGLTRE---------KLIRMALLLGSDYTEGISGI 992
+ + + + VE KD L RE + MA+ G DY EG+S I
Sbjct: 180 KRLLTKLDQHGQCVEIN-----RKDFCLVREISLTGWTDSEFRHMAIFSGCDYLEGLSNI 234
Query: 993 GIVNAIEVVNAFPEEDGLSKFREW 1016
G+ A ++ D + K +
Sbjct: 235 GLKTAYRLIRKHKTPDRIVKMLRF 258
>gi|384433639|ref|YP_005642997.1| flap structure-specific endonuclease [Sulfolobus solfataricus 98/2]
gi|261601793|gb|ACX91396.1| flap structure-specific endonuclease [Sulfolobus solfataricus 98/2]
Length = 351
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + +S+ M E ++LL+ G+P + AP E EA+ AY+ L + D
Sbjct: 117 EELRKYSQAILRLSNIMVEESKKLLRAMGIPIVQAPSEGEAEAAYLNKLGLSWAAASQDY 176
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA+ + +N I RK YVE + + K LG+TRE+LI + +L+G
Sbjct: 177 DAILFGAKRLVRNLTITGKRKLPNKDVYVEIKPELIETEILLKKLGITREQLIDIGILIG 236
Query: 983 SDYT-EGISGIGIVNAIEVVNAF 1004
+DY +GI GIG A++++ +
Sbjct: 237 TDYNPDGIRGIGPERALKIIKKY 259
>gi|323334127|gb|EGA75511.1| Din7p [Saccharomyces cerevisiae AWRI796]
gi|323355597|gb|EGA87417.1| Din7p [Saccharomyces cerevisiae VL3]
Length = 383
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%), Gaps = 17/131 (12%)
Query: 887 VSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYK 946
++ EM + ++ +PYI+AP EA+ Q Y+E L+ G++++DSD+ +FG +++
Sbjct: 78 ITPEMAKCIIDYCKLHSIPYIVAPFEADPQMVYLEKMGLIQGIISEDSDLLVFGCKTLIT 137
Query: 947 NIFDDRKYVETYFMQDIEKD----------LG-LTREKLIRMALLLGSDYTEGISGIGIV 995
+ D K +E I KD LG L+ ++ + L G DYT GI +G+V
Sbjct: 138 KLNDQGKALE------ISKDDFSALPENFPLGELSEQQFRNLVCLAGCDYTSGIWKVGVV 191
Query: 996 NAIEVVNAFPE 1006
A+++V + E
Sbjct: 192 TAMKIVKRYSE 202
>gi|116668192|pdb|2IZO|A Chain A, Structure Of An Archaeal Pcna1-Pcna2-Fen1 Complex
Length = 346
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 13/143 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + +S+ M E ++LL+ G+P + AP E EA+ AY+ L + D
Sbjct: 112 EELRKYSQAILRLSNIMVEESKKLLRAMGIPIVQAPSEGEAEAAYLNKLGLSWAAASQDY 171
Query: 935 DVFLFGARSVYKN--IFDDRK------YVET----YFMQDIEKDLGLTREKLIRMALLLG 982
D LFGA+ + +N I RK YVE + + K LG+TRE+LI + +L+G
Sbjct: 172 DAILFGAKRLVRNLTITGKRKLPNKDVYVEIKPELIETEILLKKLGITREQLIDIGILIG 231
Query: 983 SDYT-EGISGIGIVNAIEVVNAF 1004
+DY +GI GIG A++++ +
Sbjct: 232 TDYNPDGIRGIGPERALKIIKKY 254
>gi|393905975|gb|EFO24532.2| hypothetical protein LOAG_03953 [Loa loa]
Length = 498
Score = 74.3 bits (181), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
Query: 894 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 953
E + LL G+ ++ + +E EAQCA +E LV G + D D LFG ++Y+ F
Sbjct: 118 EIKMLLNSMGVRWMESKLEGEAQCAQLEQRGLVHGCIARDFDYILFGGNNLYQVEFGFSG 177
Query: 954 YVETYF----MQDIEKDLGLTREKLIRMALLLGSDYTE-GISGIGIVNAIEVVNAF 1004
++ M +++ L L+R LI M +++G DY + GI G+G+V A+E+V+ F
Sbjct: 178 KIQNNILHLSMDYLDETLCLSRSCLIAMTIMIGCDYAQKGIPGVGLVTALEIVSEF 233
>gi|385773896|ref|YP_005646463.1| XPG I domain-containing protein [Sulfolobus islandicus HVE10/4]
gi|323478011|gb|ADX83249.1| XPG I domain protein [Sulfolobus islandicus HVE10/4]
Length = 302
Score = 73.9 bits (180), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 13/143 (9%)
Query: 875 DEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDS 934
+E +K + +S+ M E + LL+ G+P + AP E EA+ AY+ + + D
Sbjct: 68 EELRKYSQAILRLSNMMVEESKNLLRAMGIPIVQAPSEGEAEAAYLNIIGFSWAAASQDY 127
Query: 935 DVFLFGARSVYKN--IFDDRKYVETYFMQDIE----------KDLGLTREKLIRMALLLG 982
D LFGA+ + +N I RK DI+ K LG+TRE+LI +++L+G
Sbjct: 128 DSILFGAKRLVRNLTITGKRKLPNKDVYIDIKPELIETELLLKKLGITREQLIDISILIG 187
Query: 983 SDYT-EGISGIGIVNAIEVVNAF 1004
+DY +GI GIG A++++ +
Sbjct: 188 TDYNPDGIKGIGPERALKIIKKY 210
>gi|448474374|ref|ZP_21602233.1| flap endonuclease-1 [Halorubrum aidingense JCM 13560]
gi|445817681|gb|EMA67550.1| flap endonuclease-1 [Halorubrum aidingense JCM 13560]
Length = 325
Score = 73.9 bits (180), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Query: 876 EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSD 935
E +LE + ++ + +ELL++ +P + AP E EAQCA+M VD ++D D
Sbjct: 118 EAARLEARTQRLTDTIHETTRELLELLDVPIVEAPAEGEAQCAHMAATGAVDHAGSEDYD 177
Query: 936 VFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIV 995
LFGA + + + + E + DLG+ R+ L+ +A+L G+D+ EG+ G+G
Sbjct: 178 TLLFGAPTTLRQL-TSKGNPELMDLAATLDDLGVDRQGLVDIAMLCGTDFNEGVRGVGPK 236
Query: 996 NAIEVV 1001
A++ +
Sbjct: 237 TAVKAI 242
>gi|317376210|sp|C4JDR3.2|FEN1_UNCRE RecName: Full=Flap endonuclease 1; Short=FEN-1; AltName: Full=Flap
structure-specific endonuclease 1
Length = 395
Score = 73.9 bits (180), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 29/237 (12%)
Query: 879 KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFL 938
K R V+ E EC++LL++ G+PYI AP EAEAQCA + A V ++D D
Sbjct: 125 KFSRRTVRVTREHNEECKKLLKLMGIPYINAPTEAEAQCAVLARAGKVYAAASEDMDTLC 184
Query: 939 FGARSVYKNI-FDDRK---YVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGI 994
F + + +++ F +++ +E + + +E LG+ R+ + + +LLG DY + I +G
Sbjct: 185 FDSPILLRHLTFSEQRKEPILEIHLDRVLE-GLGMDRKTFVDLCILLGCDYLDPIPKVGP 243
Query: 995 VNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNS 1054
A++++ + L K E +++ DP K+ + + R + DV A +
Sbjct: 244 NTALKLIR---DHGSLEKVVEAMKN-DPK--QKYTIPDDWPYEQARDLFFEPDVRPADHP 297
Query: 1055 ----------VGGVSEFDESISQFDEDKQ---SAEYSQNMKKIFMDKHTQLRLEAFY 1098
V G+ +F F ED+ +A +NMK Q RLE F+
Sbjct: 298 ECDFKWEAPDVEGLVKFLVEGKGFSEDRVRSGAARLQKNMKTA-----QQSRLEGFF 349
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.308 0.127 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,923,458,763
Number of Sequences: 23463169
Number of extensions: 1013973396
Number of successful extensions: 3090086
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1937
Number of HSP's successfully gapped in prelim test: 3077
Number of HSP's that attempted gapping in prelim test: 3057494
Number of HSP's gapped (non-prelim): 28696
length of query: 1484
length of database: 8,064,228,071
effective HSP length: 156
effective length of query: 1328
effective length of database: 8,698,941,003
effective search space: 11552193651984
effective search space used: 11552193651984
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 84 (37.0 bits)