BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 000459
         (1484 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225450069|ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score = 2114 bits (5478), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1104/1524 (72%), Positives = 1263/1524 (82%), Gaps = 97/1524 (6%)

Query: 1    MTVDKRLPLTTSNNANVVGPTAP-NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALW 59
            M VD +LPL +SNNAN+  P  P  KTIEE YQKKSQLEHILLRPDTYIGSIEKHTQALW
Sbjct: 1    MAVDNKLPLQSSNNANM--PAKPAGKTIEETYQKKSQLEHILLRPDTYIGSIEKHTQALW 58

Query: 60   IYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNS 119
            ++E  +  M+HR++SYVPGLYKIFDEILVNAADNKQRDP MD+VKVVID E + ISV+N+
Sbjct: 59   VFE--NNEMVHRSVSYVPGLYKIFDEILVNAADNKQRDPSMDSVKVVIDVEKNCISVYNN 116

Query: 120  GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
            GDGVPVEIHQEEGVYVPE+IFGHLLTSSNYDD+VKKTTGGRNGYGAKLTNIFSTEF+IET
Sbjct: 117  GDGVPVEIHQEEGVYVPEMIFGHLLTSSNYDDDVKKTTGGRNGYGAKLTNIFSTEFVIET 176

Query: 180  ADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK 239
            ADG+R KKYKQVF+NNMGKKSEP I+KCKE +NWTKVSFKPDLAKFNMTHLEDDVVALMK
Sbjct: 177  ADGRRQKKYKQVFSNNMGKKSEPVITKCKERENWTKVSFKPDLAKFNMTHLEDDVVALMK 236

Query: 240  KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY--------PKSVTRFHERVNERWEI 291
            KRVVD+AGCLGK+VKVELNG R+PVKSF +YV++Y        P+S+ R  E+VNERWEI
Sbjct: 237  KRVVDIAGCLGKTVKVELNGQRIPVKSFNDYVNLYLQSAAKSRPESLPRIAEKVNERWEI 296

Query: 292  CVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHL 351
            CV+LSEGQFQQVSFVN IATIKGGTHVDYV NQ+AN VM++VNKKNKNAN+KAH VKNHL
Sbjct: 297  CVSLSEGQFQQVSFVNSIATIKGGTHVDYVTNQIANFVMSIVNKKNKNANIKAHTVKNHL 356

Query: 352  WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQ 411
            WVFVNALIDNPAFDSQTKETLT+RQSSFGSKCELS+EFLKKV+ KSG+VE+LLSWA++KQ
Sbjct: 357  WVFVNALIDNPAFDSQTKETLTIRQSSFGSKCELSQEFLKKVS-KSGVVESLLSWADYKQ 415

Query: 412  SKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDR 471
            +KDLKK DGTK + + GI+KLEDAN AGGRNSE+CTLILTEGDSAKALAMAG+SVVGR+ 
Sbjct: 416  NKDLKKTDGTKRQRLTGITKLEDANDAGGRNSEKCTLILTEGDSAKALAMAGISVVGRNH 475

Query: 472  FGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQV 531
            +GVFPLRGKLLNVR+A   Q+L N+EI NIK+ILGL+QG EY+++KSLRYGHLMIMTDQ 
Sbjct: 476  YGVFPLRGKLLNVRDAQKKQILENAEIQNIKQILGLQQGKEYDSIKSLRYGHLMIMTDQ- 534

Query: 532  LLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI 591
                                       DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI
Sbjct: 535  ---------------------------DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI 567

Query: 592  TPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 651
            TPIVKAT++NG+VLSFYSMP+YE+WKESLGGNAS WSIKYYKGLGTSTSKEGKEYF+++ 
Sbjct: 568  TPIVKATHRNGRVLSFYSMPEYESWKESLGGNASGWSIKYYKGLGTSTSKEGKEYFKDLG 627

Query: 652  LHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELI 711
             HKKDF+W D++DG+AIELAFSKKKIE RK WL QF+PG +LDQKEK IKYSDFVNKELI
Sbjct: 628  KHKKDFMWVDEKDGDAIELAFSKKKIEERKNWLRQFQPGTYLDQKEKLIKYSDFVNKELI 687

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAK+AQFSGYVSEHSAYHHGEQSL
Sbjct: 688  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKIAQFSGYVSEHSAYHHGEQSL 747

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
            ASTI+GMAQDFVGSNNINLL PNGQFGTR+QGGKD ASARYI+TRLSPITRFLFPKDDD 
Sbjct: 748  ASTIIGMAQDFVGSNNINLLLPNGQFGTRHQGGKDHASARYIYTRLSPITRFLFPKDDDI 807

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            LLDYLNEDGQ IEPTWY+P IP VLVNGSEGIGTGWSS IPNYNPRDI+ANVRRLLNGEM
Sbjct: 808  LLDYLNEDGQSIEPTWYVPTIPMVLVNGSEGIGTGWSSSIPNYNPRDIIANVRRLLNGEM 867

Query: 892  MEPMHPWYRGFGGTIEKT-ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFL 950
            MEPM PWYRGF GTIEKT  +K+  V YTV GIIEEVNETTLRI ELP+R+WTQDY+EFL
Sbjct: 868  MEPMDPWYRGFRGTIEKTDPTKQESVGYTVKGIIEEVNETTLRISELPVRKWTQDYKEFL 927

Query: 951  ESIIDQNDS----FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN 1006
            ESI+  ND     FI+ +++++DDTTV FEV +SEE+++  KQEGLL+KFKLTT ISTSN
Sbjct: 928  ESIMTGNDKIKDPFIKDYKEHNDDTTVHFEVIMSEENLLMAKQEGLLQKFKLTTKISTSN 987

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            MHLFDS G IKKY+TPEQILEEFFH+RLEFYEKRK+V L+NLELELLKLENKVRFILGVV
Sbjct: 988  MHLFDSNGTIKKYETPEQILEEFFHLRLEFYEKRKRVLLDNLELELLKLENKVRFILGVV 1047

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVN--GVQ 1124
             GEI+V+NRKR DL  EL QKGFTPFPK SKS+E  VAGATD+TEE+EEN + V+  GV+
Sbjct: 1048 RGEIIVSNRKRADLFHELHQKGFTPFPKKSKSVEIAVAGATDDTEEAEENTDAVSKGGVR 1107

Query: 1125 SIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL 1184
            + DY+YLLSMAIGTLTLEKVQ L ADRDKLN+ VDDL+KATP++LW+ DLDAL+ +LDE 
Sbjct: 1108 ATDYEYLLSMAIGTLTLEKVQELCADRDKLNKGVDDLKKATPKALWITDLDALERELDEQ 1167

Query: 1185 DKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNAR---------ATEAM 1235
            DK+DARAEE R ++K     +AG K V+++APKN RKN+KK+NNA          A+ AM
Sbjct: 1168 DKNDARAEETRKQLKSRVMSEAGMK-VSRQAPKNPRKNNKKANNAEPAAETMDVSASSAM 1226

Query: 1236 GEMDNVTKVVKPKGRAGLKKAPAEK-------LDDDEEDEVPDLKQRLAKLNEQLASTKL 1288
             EM++V +VVKPKGRA  +KAPA+K       L D+++DEV +LK+RLA  N       L
Sbjct: 1227 -EMESVPEVVKPKGRAAPRKAPAKKKEMPTSVLKDEDDDEVHELKERLAAYN-------L 1278

Query: 1289 EPSPDQSGVMETEKVQVP-AKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIAAP 1347
            E SPD S  ME E  QVP A+KKEPS+R AAQKK +   T  S+D+   +D E  E++A 
Sbjct: 1279 ESSPDGSAAMEAEVPQVPAARKKEPSRRAAAQKKPLASFTEISDDDEDDEDFEVEEVSAS 1338

Query: 1348 EEGKKGG----RKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKPAES---S 1400
            +  KKGG      A   +     AA   KRG A KQQP+  LGQ LLTE+ KPAE+   S
Sbjct: 1339 DVKKKGGRKPAANAKAAAAKPAAAAAKNKRGAANKQQPQL-LGQTLLTEIFKPAETLGIS 1397

Query: 1401 PEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSPST------------SEEVAEVLPPK 1448
            PEKKVRKMRASPFNKKSGS+LG  G  +E + +  ++            S EV  V+P +
Sbjct: 1398 PEKKVRKMRASPFNKKSGSVLGSTGEEDETAETEENSGSASTSNSSGGESNEV--VMPAR 1455

Query: 1449 ARPQRANRRQARYVLSDSESEKAT 1472
             RPQR NR Q RYV+SDSES++ T
Sbjct: 1456 TRPQRENRVQTRYVVSDSESDQPT 1479


>gi|224055129|ref|XP_002298421.1| predicted protein [Populus trichocarpa]
 gi|222845679|gb|EEE83226.1| predicted protein [Populus trichocarpa]
          Length = 1468

 Score = 2050 bits (5310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1083/1507 (71%), Positives = 1225/1507 (81%), Gaps = 90/1507 (5%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE YQKKSQLEHILLRPDTYIGSIEKH Q LW+YE +   ++HR ++YVPGLYKIFD
Sbjct: 5    KTIEETYQKKSQLEHILLRPDTYIGSIEKHAQTLWVYEGDK--IVHRPVTYVPGLYKIFD 62

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDPKMD++KVVID E++L+SV+N+GDGVPVEIH+EEGVYVPELIFGHLL
Sbjct: 63   EILVNAADNKQRDPKMDSLKVVIDGENNLVSVYNNGDGVPVEIHKEEGVYVPELIFGHLL 122

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD  KKTTGGRNGYGAKLTNIFSTEF+IETADGKR KKYKQVF+NNMGKKSEP I
Sbjct: 123  TSSNYDDAEKKTTGGRNGYGAKLTNIFSTEFVIETADGKRQKKYKQVFSNNMGKKSEPMI 182

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +KCKEG+NWTKV+FK DLAKF+MTHLE+DVVALMKKRVVD+AGCLGK+VKVELNG RVPV
Sbjct: 183  TKCKEGENWTKVTFKADLAKFSMTHLEEDVVALMKKRVVDIAGCLGKTVKVELNGSRVPV 242

Query: 265  KSFAEYVDMYPKSVTR---------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGG 315
            KSF +YV MY  S +          F+E+V ERWE+CV+L+EGQFQQVSFVN IATIKGG
Sbjct: 243  KSFQDYVYMYLNSASEPGSERPKRFFYEKVGERWEVCVSLTEGQFQQVSFVNSIATIKGG 302

Query: 316  THVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            THVDYV NQ+ N+VM  VNKK+KN+N+KAHNVKN+LWVFVN LIDNPAFDSQTKETLTLR
Sbjct: 303  THVDYVTNQITNYVMNAVNKKHKNSNIKAHNVKNYLWVFVNCLIDNPAFDSQTKETLTLR 362

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDA 435
            QSSFGSKCELSE+FLKKV AKS IV+ LLSWA FK+SK+LKK DGTKT  V  + KLEDA
Sbjct: 363  QSSFGSKCELSEDFLKKV-AKSDIVDNLLSWAKFKESKELKKTDGTKTAKV-NVPKLEDA 420

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAM---AGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
            N AGGR SE+CTLILTEGDSAKALA+   AGL+   R  +GVFPLRGKLLNVREA+  Q+
Sbjct: 421  NEAGGRYSEKCTLILTEGDSAKALAVTGVAGLTQTERSFYGVFPLRGKLLNVREATPKQL 480

Query: 493  LNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              N EI  IKKILGL+   +Y+NVKSLRYGHLMIMTDQ      +FL             
Sbjct: 481  KENKEIECIKKILGLQHHKQYSNVKSLRYGHLMIMTDQAKERFANFL------------- 527

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
            CF   QDHDGSHIKGLLINF+HSFWPSLLK+PSFLVEFITPIVKAT++NG VLSFYSMP+
Sbjct: 528  CF--KQDHDGSHIKGLLINFLHSFWPSLLKVPSFLVEFITPIVKATHRNGTVLSFYSMPE 585

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            YE+WK SL GNAS WSIKYYKGLGTSTSKEGK YFQ++  HKKDF+W D+QDG+AIELAF
Sbjct: 586  YESWKGSLAGNASGWSIKYYKGLGTSTSKEGKAYFQSLDKHKKDFIWMDEQDGDAIELAF 645

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            SKKKIEARK WL Q+EPG HLDQ +K IKYSDF+NKELILFSMADLQRSIPSMVDGLKPG
Sbjct: 646  SKKKIEARKNWLRQYEPGTHLDQNQKLIKYSDFINKELILFSMADLQRSIPSMVDGLKPG 705

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRKILFCSFKRNF+KEAK++QFSGYVSEHSAYHHGEQSLASTI+GMAQDFVGSNNINLL 
Sbjct: 706  QRKILFCSFKRNFVKEAKISQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLL 765

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            PNGQFGTR+ GGKD ASARYI+T+LSPITRFLFPKDDD LLDYL+EDGQ IEP WYMPII
Sbjct: 766  PNGQFGTRSVGGKDHASARYIYTQLSPITRFLFPKDDDGLLDYLDEDGQTIEPNWYMPII 825

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P VLVNG EGIGTGWS++IPNYNPRDIVAN+RRLLNGEMMEPM+PWYRGF GTIEK ASK
Sbjct: 826  PMVLVNGCEGIGTGWSTFIPNYNPRDIVANIRRLLNGEMMEPMNPWYRGFKGTIEKGASK 885

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN---------DSFIRG 963
            EAG +YTV G+I EVNETTLRI ELPIRRWT DY+ FL S+ + N         D FI+ 
Sbjct: 886  EAGCSYTVNGVINEVNETTLRITELPIRRWTDDYKAFLNSVTEGNRDENGNLPKDPFIKD 945

Query: 964  FRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPE 1023
            FR+Y DD TV FEV LSEE+MM  KQEGLLKKFKLTTTISTSNMHLFDS GVIKKYD PE
Sbjct: 946  FRKYGDDATVVFEVLLSEENMMIAKQEGLLKKFKLTTTISTSNMHLFDSAGVIKKYDNPE 1005

Query: 1024 QILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLE 1083
            QILEEFFH+RLE+YE+RKKV LENLE ELLKLENKVRFILGVV GEI+VNNRKR DL LE
Sbjct: 1006 QILEEFFHLRLEYYERRKKVLLENLEFELLKLENKVRFILGVVRGEIIVNNRKRADLFLE 1065

Query: 1084 LRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEK 1143
            L QKGFTP PK SK   AVVAGATD+ +E+E++ E V+GV++ DYDYLLSMAIGTLTLEK
Sbjct: 1066 LHQKGFTPIPKKSK---AVVAGATDDKDEAEDSLE-VSGVRASDYDYLLSMAIGTLTLEK 1121

Query: 1144 VQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGN 1203
            VQ L AD DKLN EVD+LRK TP  LWVKDL+AL+MQLD LDK DA AEE R K+KG+ N
Sbjct: 1122 VQQLCADHDKLNGEVDNLRKTTPIVLWVKDLEALEMQLDVLDKYDAEAEEARKKLKGDAN 1181

Query: 1204 GDAGPKIVAKRAPKNARKNDKKS-NNARATEAMG-------EMDNVTKVVKPKGRAGLKK 1255
            G+AG K V+K+APKN RK  KK+ N   + E MG       E +N  +VVKPKGRAG +K
Sbjct: 1182 GEAGFK-VSKQAPKNPRKYTKKAINEEVSVETMGKASSSAMETENAAEVVKPKGRAGSRK 1240

Query: 1256 APAEKLD-----DDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKK 1310
            APA+K +      DE+DE+  LK R       L + +L+ SP+QS  MET+ ++VPA   
Sbjct: 1241 APAKKQEKPSPISDEDDEIESLKDR-------LKAYRLDSSPEQSADMETDVLRVPA--- 1290

Query: 1311 EPSKRTAAQKK---VVTVETSDSEDEIIIDDDEAFEIAAPEEGKKGGR-KAAGNSKAAKP 1366
                R AA+KK    V+V +   ++  + DD +    A PE  KKGGR  AA N KAAKP
Sbjct: 1291 ---GRNAARKKPLAAVSVISDSEDEPDLDDDFDVQVKAVPETKKKGGRKAAAANDKAAKP 1347

Query: 1367 AAETKKRGPAKKQQPEASLGQRLLTEMLKPAES---SPEKKVRKMRASPFNKKSGSMLGR 1423
             A TK+RGPA KQ     LGQ+LLTEMLKPAE    SPEKKVRKMRASPFNKKSGS+LG 
Sbjct: 1348 PAATKRRGPASKQS--QGLGQQLLTEMLKPAEESGISPEKKVRKMRASPFNKKSGSLLGG 1405

Query: 1424 AGTIEEPS-GSSPSTSEEVAEVL--PPKARPQRANRRQARYVLSDSESEKATDDSEFD-- 1478
                ++    + P+++ E A+V+  P KARPQRANR+Q  YVLSDSESE    DS+F+  
Sbjct: 1406 IHKGDDTGIETMPASTSENADVIDVPAKARPQRANRKQTTYVLSDSESE----DSDFEQA 1461

Query: 1479 -EDEDED 1484
             ED D D
Sbjct: 1462 SEDSDSD 1468


>gi|297736284|emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 2048 bits (5307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1079/1522 (70%), Positives = 1233/1522 (81%), Gaps = 130/1522 (8%)

Query: 1    MTVDKRLPLTTSNNANVVGPTAP-NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALW 59
            M VD +LPL +SNNAN+  P  P  KTIEE YQKKSQLEHILLRPDTYIGSIEKHTQALW
Sbjct: 1    MAVDNKLPLQSSNNANM--PAKPAGKTIEETYQKKSQLEHILLRPDTYIGSIEKHTQALW 58

Query: 60   IYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNS 119
            ++E  +  M+HR++SYVPGLYKIFDEILVNAADNKQRDP MD+VKVVID E + ISV+N+
Sbjct: 59   VFE--NNEMVHRSVSYVPGLYKIFDEILVNAADNKQRDPSMDSVKVVIDVEKNCISVYNN 116

Query: 120  GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
            GDGVPVEIHQEEGVYVPE+IFGHLLTSSNYDD+VKKTTGGRNGYGAKLTNIFSTEF+IET
Sbjct: 117  GDGVPVEIHQEEGVYVPEMIFGHLLTSSNYDDDVKKTTGGRNGYGAKLTNIFSTEFVIET 176

Query: 180  ADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK 239
            ADG+R KKYKQVF+NNMGKKSEP I+KCKE +NWTKVSFKPDLAKFNMTHLEDDVVALMK
Sbjct: 177  ADGRRQKKYKQVFSNNMGKKSEPVITKCKERENWTKVSFKPDLAKFNMTHLEDDVVALMK 236

Query: 240  KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY--------PKSVTRFHERVNERWEI 291
            KRVVD+AGCLGK+VKVELNG R+PVKSF +YV++Y        P+S+ R  E+VNERWEI
Sbjct: 237  KRVVDIAGCLGKTVKVELNGQRIPVKSFNDYVNLYLQSAAKSRPESLPRIAEKVNERWEI 296

Query: 292  CVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHL 351
            CV+LSEGQFQQVSFVN IATIKGGTHVDYV NQ+AN VM++VNKKNKNAN+KAH VKNHL
Sbjct: 297  CVSLSEGQFQQVSFVNSIATIKGGTHVDYVTNQIANFVMSIVNKKNKNANIKAHTVKNHL 356

Query: 352  WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQ 411
            WVFVNALIDNPAFDSQTKETLT+RQSSFGSKCELS+EFLKKV+ KSG+VE+LLSWA++KQ
Sbjct: 357  WVFVNALIDNPAFDSQTKETLTIRQSSFGSKCELSQEFLKKVS-KSGVVESLLSWADYKQ 415

Query: 412  SKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDR 471
            +KDLKK DGTK + + GI+KLEDAN AGGRNSE+CTLILTEGDSAKALAMAG+SVVGR+ 
Sbjct: 416  NKDLKKTDGTKRQRLTGITKLEDANDAGGRNSEKCTLILTEGDSAKALAMAGISVVGRNH 475

Query: 472  FGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQV 531
            +GVFPLRGKLLNVR+A   Q+L N+EI NIK+ILGL+QG EY+++KSLRYGHLMIMTDQ 
Sbjct: 476  YGVFPLRGKLLNVRDAQKKQILENAEIQNIKQILGLQQGKEYDSIKSLRYGHLMIMTDQ- 534

Query: 532  LLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI 591
                                       DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI
Sbjct: 535  ---------------------------DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI 567

Query: 592  TPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 651
            TPIVKAT++NG+VLSFYSMP+YE+WKESLGGNAS WSIKYYKGLGTSTSKEGKEYF+++ 
Sbjct: 568  TPIVKATHRNGRVLSFYSMPEYESWKESLGGNASGWSIKYYKGLGTSTSKEGKEYFKDLG 627

Query: 652  LHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELI 711
             HKKDF+W D++DG+AIELAFSKKKIE RK WL QF+PG +LDQKEK IKYSDFVNKELI
Sbjct: 628  KHKKDFMWVDEKDGDAIELAFSKKKIEERKNWLRQFQPGTYLDQKEKLIKYSDFVNKELI 687

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAK+AQFSGYVSEHSAYHHGEQSL
Sbjct: 688  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKIAQFSGYVSEHSAYHHGEQSL 747

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
            ASTI+GMAQDFVGSNNINLL PNGQFGTR+QGGKD ASARYI+TRLSPITRFLFPKDDD 
Sbjct: 748  ASTIIGMAQDFVGSNNINLLLPNGQFGTRHQGGKDHASARYIYTRLSPITRFLFPKDDDI 807

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            LLDYLNEDGQ IEPTWY+P IP VLVNGSEGIGTGWSS IPNYNPRDI+ANVRRLLNGEM
Sbjct: 808  LLDYLNEDGQSIEPTWYVPTIPMVLVNGSEGIGTGWSSSIPNYNPRDIIANVRRLLNGEM 867

Query: 892  MEPMHPWYRGFGGTIEKT-ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFL 950
            MEPM PWYRGF GTIEKT  +K+  V YTV GIIEEVNETTLRI ELP+R+WTQDY+EFL
Sbjct: 868  MEPMDPWYRGFRGTIEKTDPTKQESVGYTVKGIIEEVNETTLRISELPVRKWTQDYKEFL 927

Query: 951  ESIIDQNDS----FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN 1006
            ESI+  ND     FI+ +++++DDTTV FEV +SEE+++  KQEGLL+KFKLTT ISTSN
Sbjct: 928  ESIMTGNDKIKDPFIKDYKEHNDDTTVHFEVIMSEENLLMAKQEGLLQKFKLTTKISTSN 987

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            MHLFDS G IKKY+TPEQILEEFFH+RLEFYEKRK+V L+NLELELLKLENKVRFILGVV
Sbjct: 988  MHLFDSNGTIKKYETPEQILEEFFHLRLEFYEKRKRVLLDNLELELLKLENKVRFILGVV 1047

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI 1126
             GEI+V+NRKR DL  EL QK                                   V++ 
Sbjct: 1048 RGEIIVSNRKRADLFHELHQK-----------------------------------VRAT 1072

Query: 1127 DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
            DY+YLLSMAIGTLTLEKVQ L ADRDKLN+ VDDL+KATP++LW+ DLDAL+ +LDE DK
Sbjct: 1073 DYEYLLSMAIGTLTLEKVQELCADRDKLNKGVDDLKKATPKALWITDLDALERELDEQDK 1132

Query: 1187 SDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNAR---------ATEAMGE 1237
            +DARAEE R ++K     +AG K V+++APKN RKN+KK+NNA          A+ AM E
Sbjct: 1133 NDARAEETRKQLKSRVMSEAGMK-VSRQAPKNPRKNNKKANNAEPAAETMDVSASSAM-E 1190

Query: 1238 MDNVTKVVKPKGRAGLKKAPAEK-------LDDDEEDEVPDLKQRLAKLNEQLASTKLEP 1290
            M++V +VVKPKGRA  +KAPA+K       L D+++DEV +LK+RLA  N       LE 
Sbjct: 1191 MESVPEVVKPKGRAAPRKAPAKKKEMPTSVLKDEDDDEVHELKERLAAYN-------LES 1243

Query: 1291 SPDQSGVMETEKVQVP-AKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIAAPEE 1349
            SPD S  ME E  QVP A+KKEPS+R AAQKK +   T  S+D+   +D E  E++A + 
Sbjct: 1244 SPDGSAAMEAEVPQVPAARKKEPSRRAAAQKKPLASFTEISDDDEDDEDFEVEEVSASDV 1303

Query: 1350 GKKGG----RKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKPAES---SPE 1402
             KKGG      A   +     AA   KRG A KQQP+  LGQ LLTE+ KPAE+   SPE
Sbjct: 1304 KKKGGRKPAANAKAAAAKPAAAAAKNKRGAANKQQPQL-LGQTLLTEIFKPAETLGISPE 1362

Query: 1403 KKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSPST------------SEEVAEVLPPKAR 1450
            KKVRKMRASPFNKKSGS+LG  G  +E + +  ++            S EV  V+P + R
Sbjct: 1363 KKVRKMRASPFNKKSGSVLGSTGEEDETAETEENSGSASTSNSSGGESNEV--VMPARTR 1420

Query: 1451 PQRANRRQARYVLSDSESEKAT 1472
            PQR NR Q RYV+SDSES++ T
Sbjct: 1421 PQRENRVQTRYVVSDSESDQPT 1442


>gi|224106109|ref|XP_002314046.1| predicted protein [Populus trichocarpa]
 gi|222850454|gb|EEE88001.1| predicted protein [Populus trichocarpa]
          Length = 1482

 Score = 2037 bits (5277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1070/1516 (70%), Positives = 1222/1516 (80%), Gaps = 90/1516 (5%)

Query: 5    KRLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEE 64
            K++PL+TS++ N+       KTIEE YQKKSQLEHILLRPDTYIGSIEKH Q LW++E +
Sbjct: 6    KKIPLSTSDSLNM----NQEKTIEETYQKKSQLEHILLRPDTYIGSIEKHAQILWVFEND 61

Query: 65   SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
               M+HR+++YVPGLYKIFDEILVNAADNKQRDPKMD++KVVID E++L+SV+N+GDGVP
Sbjct: 62   K--MVHRSVTYVPGLYKIFDEILVNAADNKQRDPKMDSLKVVIDVENNLVSVYNNGDGVP 119

Query: 125  VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
            V+IH+EEGVYVPELIFGHLLTSSNYDD +KKTTGGRNGYGAKLTNIFSTEF+IETADGKR
Sbjct: 120  VDIHKEEGVYVPELIFGHLLTSSNYDDTMKKTTGGRNGYGAKLTNIFSTEFVIETADGKR 179

Query: 185  LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
             KKYKQVF+NNMGK+SEP I+KCKE +NWTKV+FKPDLAKF+MTHLE+DVVALMKKRVVD
Sbjct: 180  KKKYKQVFSNNMGKRSEPIITKCKESENWTKVTFKPDLAKFSMTHLEEDVVALMKKRVVD 239

Query: 245  LAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR--------FHERVNERWEICVTLS 296
            +AGCLGK+VKVELNG RVPVKSF +YV+MY  S           F+++V ERWE+CV+L+
Sbjct: 240  MAGCLGKTVKVELNGSRVPVKSFQDYVNMYLNSAAESGSERPKCFYDKVGERWEVCVSLT 299

Query: 297  EGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVN 356
            EGQFQQ SFVN IATIKGGTHVDYV NQ+ N+VM  VNKK+KN N+KAHNVKN+LWVFVN
Sbjct: 300  EGQFQQASFVNSIATIKGGTHVDYVTNQITNYVMNAVNKKHKNGNIKAHNVKNYLWVFVN 359

Query: 357  ALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK 416
             LIDNPAFDSQTKETLTLRQSSFGSKCELSE+FLKKV AKS IV+ LLSWA FK++K+LK
Sbjct: 360  CLIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKV-AKSDIVDNLLSWAKFKENKELK 418

Query: 417  KNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAG---LSVVGRDRFG 473
            K DGTKT  V  + KLEDAN AGGR SE+CTLILTEGDSAKALA+AG   LS + R+ +G
Sbjct: 419  KTDGTKTAKV-NVPKLEDANEAGGRYSEKCTLILTEGDSAKALAIAGVAGLSQMERNFYG 477

Query: 474  VFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLL 533
            VFPLRGKLLNVREA+S Q+  N EI +IKKILGL+   +Y NVKSLRYGHLMIMTDQ   
Sbjct: 478  VFPLRGKLLNVREATSKQLKENKEIESIKKILGLQHDKQYINVKSLRYGHLMIMTDQ--- 534

Query: 534  APLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITP 593
                                     DHDGSHIKGLLINFIHSFWPSLLK+PSFLVEFITP
Sbjct: 535  -------------------------DHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFITP 569

Query: 594  IVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLH 653
            IVKAT++NG VLSFYSMP+YE+WKESL GNAS WSIKYYKGLGTSTSKEGK+YF+N+  H
Sbjct: 570  IVKATHRNGTVLSFYSMPEYESWKESLSGNASGWSIKYYKGLGTSTSKEGKDYFKNLHKH 629

Query: 654  KKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILF 713
            KKDF+W D+ DG+AIELAFSKKKIEARK WL Q EPG HLD  +K IKYSDF+NKELILF
Sbjct: 630  KKDFLWMDELDGDAIELAFSKKKIEARKNWLRQHEPGTHLDHNQKIIKYSDFINKELILF 689

Query: 714  SMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAS 773
            SMADLQRSIPSMVDGLKPGQRKILFCSFKRNF+KEAKV+QFSGYVSEHSAYHHGEQSLA 
Sbjct: 690  SMADLQRSIPSMVDGLKPGQRKILFCSFKRNFVKEAKVSQFSGYVSEHSAYHHGEQSLAG 749

Query: 774  TILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLL 833
            TI+GMAQDFVGSNNINLLQPNGQFGTR+ GGKD ASARYI+T+LSPITRFLFPKDDD LL
Sbjct: 750  TIIGMAQDFVGSNNINLLQPNGQFGTRSVGGKDHASARYIYTQLSPITRFLFPKDDDGLL 809

Query: 834  DYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMME 893
            DYL+EDGQ IEPTWYMPIIPTVLVNG EGIGTGWS++IPNYNPRD+VAN+RRLLNGEMME
Sbjct: 810  DYLDEDGQTIEPTWYMPIIPTVLVNGCEGIGTGWSTFIPNYNPRDVVANIRRLLNGEMME 869

Query: 894  PMHPWYRGFGGTIEKTASKEAGVT-YTVTGIIEEVNETTLRIKELPIRRWTQDYREFLES 952
            PM+PWYRGF GTIEK ASKE G + YTV G+I EVNETTLRI ELPIRRWT DY+ FL S
Sbjct: 870  PMNPWYRGFKGTIEKGASKEGGCSSYTVNGVINEVNETTLRITELPIRRWTDDYKAFLNS 929

Query: 953  II----DQN-----DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTIS 1003
            +     D+N     D F++ FR+Y DD  V FEV LSEE+M+  KQEGLLKKFKLTTTIS
Sbjct: 930  VTEGTRDENGNLPKDPFVKDFRKYGDDAAVHFEVQLSEENMLVAKQEGLLKKFKLTTTIS 989

Query: 1004 TSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFIL 1063
            TSNMHLFDS GVIKKYD PEQILE FFH+RLE+YE RKKV LENLE ELLKLENKVRFIL
Sbjct: 990  TSNMHLFDSAGVIKKYDNPEQILENFFHLRLEYYETRKKVLLENLEFELLKLENKVRFIL 1049

Query: 1064 GVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGV 1123
            GVV GEI+VNNRKR DLLLEL QKGF P PK SK   AVVAGATD+TEE+E++P+V +GV
Sbjct: 1050 GVVRGEIIVNNRKRADLLLELHQKGFNPIPKKSK---AVVAGATDDTEEAEDSPDV-SGV 1105

Query: 1124 QSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
            ++ DYDYLLSMAIGTLTLE+VQ L ADRDKLN EVD LRK TP+ LWVKDL+AL+MQLD 
Sbjct: 1106 RASDYDYLLSMAIGTLTLERVQQLCADRDKLNGEVDSLRKTTPKVLWVKDLEALEMQLDM 1165

Query: 1184 LDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKS-NNARATEAMG------ 1236
            LD+ DA AEE R K+KG G        V+K+APK  RKN KK+ N   + E  G      
Sbjct: 1166 LDEYDAEAEEARRKLKGGGAKGEAGFKVSKQAPKYPRKNTKKAINEEVSVETTGTSSSFA 1225

Query: 1237 ----EMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSP 1292
                  +N   VVKPKGRAG KKAPA+        +  D    +  L ++L + +L+ SP
Sbjct: 1226 IETASSENAAAVVKPKGRAGSKKAPAKMEKLSPVLDDFDEDDEIESLKDRLNAYRLDSSP 1285

Query: 1293 DQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIAA-PEEGK 1351
            +QS  MET+ +QVPA++    K+  A   V+    SDSEDE  +DDD   E+ A PE  K
Sbjct: 1286 EQSADMETDVLQVPARRGAARKKPLANVSVI----SDSEDEPNLDDDADVEVKALPETKK 1341

Query: 1352 KGGRKAAGNSKAAK-PAAETKKRGPAKKQQPEASLGQRLLTEMLKPAES---SPEKKVRK 1407
            KGGRKAA  +  A  P A TK+RGPA +Q     LGQ+LLTEMLKPAE    SPEKKVRK
Sbjct: 1342 KGGRKAAAANDKAAKPPAATKRRGPASQQS--QGLGQKLLTEMLKPAEGAGISPEKKVRK 1399

Query: 1408 MRASPFNKKSGSMLGRA----GTIEEPSGSSPSTSEEVAEVLPPKARPQRANRRQARYVL 1463
            +RASPFNKKSGS+LGR      T  EP  +S S + +V +V P +ARPQRANR+Q RYVL
Sbjct: 1400 VRASPFNKKSGSVLGRIHKEDDTGSEPMSASSSENTDVIDV-PARARPQRANRKQTRYVL 1458

Query: 1464 SDSESEKATDDSEFDE 1479
            SDSESEK  +DS+F++
Sbjct: 1459 SDSESEK--EDSDFEQ 1472


>gi|26984133|gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum]
 gi|26984168|gb|AAN85208.1| DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score = 1986 bits (5146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1041/1525 (68%), Positives = 1211/1525 (79%), Gaps = 93/1525 (6%)

Query: 5    KRLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEE 64
            K+LPL +S+NAN+       KTIE+ YQKK+QLEHILLRPDTYIGS+EKHTQ LW++E +
Sbjct: 4    KKLPLQSSSNANIA---TNGKTIEQTYQKKTQLEHILLRPDTYIGSVEKHTQTLWVWEND 60

Query: 65   SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
               M HR ++YVPGLYKIFDEILVNAADNKQRDPKMDAV+VVID E + ISV+N+GDG+P
Sbjct: 61   K--MTHRPVTYVPGLYKIFDEILVNAADNKQRDPKMDAVEVVIDPEQNFISVYNNGDGIP 118

Query: 125  VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
            VEIHQEEGVYVPELIFGHLLTSSNYDD  KKTTGGRNGYGAKLTNIFSTEF+IETADGKR
Sbjct: 119  VEIHQEEGVYVPELIFGHLLTSSNYDDAEKKTTGGRNGYGAKLTNIFSTEFVIETADGKR 178

Query: 185  LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
             KKYKQVF++NMGKK EP I+KCK  +NWTKVS KPDLAKFNM HLE+DVVALM+KRV+D
Sbjct: 179  QKKYKQVFSSNMGKKGEPIITKCKASENWTKVSSKPDLAKFNMEHLEEDVVALMRKRVID 238

Query: 245  LAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHE--RVNE-----RWEICVTLSE 297
            L GCLGK+VKV+LN  R+PVKSF EY  ++  S     E  +V +     RWEICV+LSE
Sbjct: 239  LGGCLGKTVKVKLNEQRIPVKSFEEYCKLFLDSTDAKREFLKVTDADGLLRWEICVSLSE 298

Query: 298  GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNA 357
            GQFQQVSFVN IATIKGGTHVDYVANQ+ANH+M  V KKNKNAN+KAH VKNHLW+FVNA
Sbjct: 299  GQFQQVSFVNSIATIKGGTHVDYVANQIANHIMGAVIKKNKNANIKAHAVKNHLWMFVNA 358

Query: 358  LIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK 417
            LIDNPAFDSQTKETLTLRQSSFGSKCEL  +FLKKV    GIVETLLSWA+FK SKDLKK
Sbjct: 359  LIDNPAFDSQTKETLTLRQSSFGSKCELQPDFLKKVEKNIGIVETLLSWADFKNSKDLKK 418

Query: 418  NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPL 477
             DG K+E V+ + KLEDAN AGGRNSE+CTLILTEGDSAKALAMAG+SVVGRD +GVFPL
Sbjct: 419  TDGKKSEKVK-VEKLEDANDAGGRNSEKCTLILTEGDSAKALAMAGISVVGRDHYGVFPL 477

Query: 478  RGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLS 537
            RGKLLNVREAS  QV  N EI  IKKILGL+ G EY++VKSLRYGHLMIMTD        
Sbjct: 478  RGKLLNVREASHKQVSENKEIEAIKKILGLQTGKEYDSVKSLRYGHLMIMTD-------- 529

Query: 538  FLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA 597
                                QDHDGSHIKGLLINFIH+FWPSLLK+PSFL+EFITPIVKA
Sbjct: 530  --------------------QDHDGSHIKGLLINFIHTFWPSLLKVPSFLIEFITPIVKA 569

Query: 598  TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDF 657
            T+K+GK+LSFY+MP+YE+W++SLG N+S WSIKYYKGLGTSTSKEGKEYFQ++  H+KDF
Sbjct: 570  THKSGKILSFYTMPEYESWRKSLGANSSGWSIKYYKGLGTSTSKEGKEYFQDLQKHRKDF 629

Query: 658  VWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMAD 717
            +W D+QDGE+IELAFSKKKIEARK WL QFEPG HLDQKEKYI Y++FVNKELILFSMAD
Sbjct: 630  IWADNQDGESIELAFSKKKIEARKNWLRQFEPGTHLDQKEKYISYTEFVNKELILFSMAD 689

Query: 718  LQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
            LQRSIPSM+DGLKPGQRKILFC+FKRNF+KEAKV+QFSGYVSEHSAYHHGEQSL+STI+G
Sbjct: 690  LQRSIPSMLDGLKPGQRKILFCAFKRNFVKEAKVSQFSGYVSEHSAYHHGEQSLSSTIIG 749

Query: 778  MAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLN 837
            MAQD+VGSNN+NLLQPNGQFGTRN GGKD AS+RYI+TRLSPI RFLFPK+DD + DYLN
Sbjct: 750  MAQDYVGSNNVNLLQPNGQFGTRNMGGKDHASSRYIYTRLSPIARFLFPKEDDTIHDYLN 809

Query: 838  EDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHP 897
            EDGQ IEPTWY+PI+P VL+NGSEGIGTGWSSY+PNYNPRD+VANVRRLLN E MEPM P
Sbjct: 810  EDGQYIEPTWYVPIVPMVLINGSEGIGTGWSSYVPNYNPRDLVANVRRLLNDEPMEPMDP 869

Query: 898  WYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN 957
            WY+GF GTIEKTA+KEAG TYTVTGIIEEVNETTLRI ELP+RRWT+DY++FLES+   N
Sbjct: 870  WYKGFKGTIEKTATKEAGATYTVTGIIEEVNETTLRISELPVRRWTEDYKQFLESMTVSN 929

Query: 958  DS----FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
            D     FI+  R Y D+ +V FEV +SEE+++  +QEGLLKKFKL TTISTSNMHLFDS 
Sbjct: 930  DKAKDPFIKEVRAYGDENSVCFEVIMSEENLILAQQEGLLKKFKLATTISTSNMHLFDSN 989

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G IKKYD PE ILEEF+H+RLE+YEKRKK  LE LELELL++ENKV+FILGVV  EI+VN
Sbjct: 990  GKIKKYDNPEDILEEFYHVRLEYYEKRKKALLEILELELLRIENKVKFILGVVKVEIIVN 1049

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLS 1133
            NRKR DLLLEL++KGFTPFPK  K++EAVVA  +D+ E+SEE  E+  GV++ DYDYLLS
Sbjct: 1050 NRKRADLLLELKEKGFTPFPK-KKAVEAVVADTSDDAEDSEE--ELNRGVRAGDYDYLLS 1106

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEE 1193
            M IGTLTLEKVQ L A+RD+LN EV+D+R ATP+ LW+KDLD L+ QLDE DK D +AEE
Sbjct: 1107 MPIGTLTLEKVQELCAERDQLNGEVEDMRNATPKLLWLKDLDVLEKQLDEQDKIDIQAEE 1166

Query: 1194 ERMKIKGNGNGDAGPKIVAKRAPK-NARKNDKKSNNARAT-EAM--------GEMDNVTK 1243
             R KIK      AG K     APK   RKN KK++   +T E M        G   NVT+
Sbjct: 1167 AREKIKKKVMNAAGLK-----APKPKPRKNVKKASVVESTAEPMDRVSCFNSGNRSNVTE 1221

Query: 1244 VVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSG-VMETEK 1302
            VVKPK R G KKAPA+      EDE  +    +  L ++LA+  L  SPD S   METE 
Sbjct: 1222 VVKPKARGGSKKAPAKAKPIAVEDEEEEEDDEVLALKDRLAAYNLNSSPDHSAEAMETEA 1281

Query: 1303 VQVPAKKKEPSKRTAAQKKVV--TVETSDSEDEI-IIDDDEAF-EIAAPEEGKKGGRKAA 1358
             +  A+KK P+++ AA+KK +    + S+ EDEI I DDDE+  E+A   + K G + A 
Sbjct: 1282 PK--AQKKAPTRKAAAKKKTLPSIADVSEGEDEIEISDDDESEPEVAVGGKKKGGRKPAT 1339

Query: 1359 GNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKPAE----SSPEKKVRKMRASPFN 1414
              +  A      KKRGPA KQ     +GQ+L+T +LKPAE    SSPEKKVRKMRASPFN
Sbjct: 1340 AKAAPAAAKQPPKKRGPANKQA--VGIGQKLITSILKPAENTDNSSPEKKVRKMRASPFN 1397

Query: 1415 KKSGSMLG--RAGTIEEPSGSSPSTS-----EEVAE-VLPPKARPQRANRRQARYVLSDS 1466
            +KSG++LG  +  T++E   +SP +S     +EV E V+ PKAR  R   ++  YV+SDS
Sbjct: 1398 EKSGAVLGKNKGSTLQENEDASPVSSLGSLEDEVNEAVVAPKARVTRG--KKTTYVISDS 1455

Query: 1467 ESE------KATDDSEFD-EDEDED 1484
            ++E      + TDDSEFD +D DED
Sbjct: 1456 DNEDNTNEFEPTDDSEFDGDDSDED 1480


>gi|86438844|emb|CAJ44361.1| putative DNA topoisomerase II [Malus x domestica]
          Length = 1467

 Score = 1896 bits (4911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1037/1569 (66%), Positives = 1186/1569 (75%), Gaps = 187/1569 (11%)

Query: 1    MTVDKRLPLTTSNNANVVGPTAPN------KTIEEMYQKKSQLEHILLRPDTYIGSIEKH 54
            M ++K+ PL TSNNAN+  P AP       KTIEEMYQKKSQLEHILLRPDTYIGSIEKH
Sbjct: 1    MAIEKKRPLQTSNNANIDHP-APTDGGGKGKTIEEMYQKKSQLEHILLRPDTYIGSIEKH 59

Query: 55   TQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLI 114
            T  LW+Y+  +  M++R+I+YVPGLYKIFDEILVNAADNKQRDP MD+VKV ID E + I
Sbjct: 60   TSNLWVYQ--NGEMVNRSITYVPGLYKIFDEILVNAADNKQRDPSMDSVKVTIDVEQNSI 117

Query: 115  SVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTE 174
            SV+N+G GVPVEIHQEE VYVPELIFGHLLTSSNYDD VKKTTGGRNGYGAKLTNIFSTE
Sbjct: 118  SVYNNGAGVPVEIHQEERVYVPELIFGHLLTSSNYDDTVKKTTGGRNGYGAKLTNIFSTE 177

Query: 175  FIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDV 234
            FIIETADG R KKYKQVFTNNMG K+ P I+KCKE +NWT+V++KPDL+KFNMTHLEDDV
Sbjct: 178  FIIETADGMRQKKYKQVFTNNMGNKTVPVITKCKESENWTRVTYKPDLSKFNMTHLEDDV 237

Query: 235  VALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVN 286
            VALM+KRV+DLAGCLGK+VKVELNG RVPVKSF +YVD+Y +S        + R  E+VN
Sbjct: 238  VALMQKRVIDLAGCLGKTVKVELNGTRVPVKSFLDYVDLYLQSAGKSRDAPLLRLTEKVN 297

Query: 287  ERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHN 346
            +RWEICV+LS+GQFQQVSFVNGIATIKGGTHV+YV +Q+ NHVM +VNKKNKNAN+KAHN
Sbjct: 298  DRWEICVSLSDGQFQQVSFVNGIATIKGGTHVNYVTDQITNHVMNIVNKKNKNANLKAHN 357

Query: 347  VKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSW 406
            VKN+LWVFVNALIDNPAFDSQTKETLT+R +SFGSKCEL+  FL KV AKSGIV++LLSW
Sbjct: 358  VKNYLWVFVNALIDNPAFDSQTKETLTIRPNSFGSKCELTPAFLNKV-AKSGIVDSLLSW 416

Query: 407  ANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSV 466
            ANFKQ+KDLKK DGTKTE V  I+KLEDAN AGG+NSE+CTLILTEGDSAKALAMAGL+V
Sbjct: 417  ANFKQNKDLKKTDGTKTERVHNINKLEDANYAGGKNSEKCTLILTEGDSAKALAMAGLAV 476

Query: 467  VGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMI 526
            VGRD +GVFPLRGKLLNVREAS+ Q  + S I  +                         
Sbjct: 477  VGRDHYGVFPLRGKLLNVREASATQDHDGSHIKGL------------------------- 511

Query: 527  MTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSF 586
                        L+ FI  F W +              I   L+ FI             
Sbjct: 512  ------------LINFIHSF-WPSLL-----------KIPSFLVEFI------------- 534

Query: 587  LVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEY 646
                 TPIVKAT+KNG  L+FYSMP+YEAWKESL GNAS WSIKYYKGLGTSTSKEG++Y
Sbjct: 535  -----TPIVKATHKNGNTLAFYSMPEYEAWKESLRGNASGWSIKYYKGLGTSTSKEGRDY 589

Query: 647  FQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFV 706
            FQN+  HKKDF+W D++DGEAIELAFSKKKIE RK WL QFEPG HLDQKEK IKYSDFV
Sbjct: 590  FQNLVQHKKDFIWIDERDGEAIELAFSKKKIEERKNWLRQFEPGVHLDQKEKLIKYSDFV 649

Query: 707  NKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHH 766
            +KELI FSMADLQRSIPSMVDGLKPGQRKILF SFKRNF+KEAKVAQFSGYVSEHSAYHH
Sbjct: 650  HKELIQFSMADLQRSIPSMVDGLKPGQRKILFSSFKRNFVKEAKVAQFSGYVSEHSAYHH 709

Query: 767  GEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFP 826
            GEQSLASTI+GMAQDFVGSNNINLLQPNGQFGTRN GGKD ASARYI+TRLSPITRFLF 
Sbjct: 710  GEQSLASTIIGMAQDFVGSNNINLLQPNGQFGTRNLGGKDHASARYIYTRLSPITRFLFS 769

Query: 827  KDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRL 886
            KDDD+LLDYLNEDGQ IEPTWY+PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRL
Sbjct: 770  KDDDRLLDYLNEDGQSIEPTWYVPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRL 829

Query: 887  LNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDY 946
            L+G+ M PM PWYRGF GTIEKT  KE+GV+YT  GIIEEV+ET+LRI ELPIRRWTQDY
Sbjct: 830  LDGDAMVPMDPWYRGFTGTIEKTV-KESGVSYTACGIIEEVSETSLRISELPIRRWTQDY 888

Query: 947  REFLESIIDQNDS----FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTI 1002
            +EFLESI + ND     FI GF Q+SD +TVD  V L EE +M  KQEGLLKKFKLTT+I
Sbjct: 889  KEFLESISEGNDKAKDPFIEGFTQHSDHSTVDIIVHLREEKLMAAKQEGLLKKFKLTTSI 948

Query: 1003 STSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFI 1062
            STSNMHLFD KGVIKKYDTPEQILE+FFH+RLEFYEKRKKV LE+LELELLKLENKVRFI
Sbjct: 949  STSNMHLFDRKGVIKKYDTPEQILEDFFHLRLEFYEKRKKVLLEDLELELLKLENKVRFI 1008

Query: 1063 LGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPE--VV 1120
            LGVVNGEI+V+NRKR DL LEL+QKGFTPFPK +K++E  VAGAT+ TE++EEN E  + 
Sbjct: 1009 LGVVNGEIIVSNRKRADLFLELQQKGFTPFPKKTKALEPEVAGATENTEDAEENSEAAIE 1068

Query: 1121 NGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQ 1180
             G +  DY+YL+SMAIGTLT+E+VQ LLADRDK N EVD+LRK+TP SLW+KDLDAL+M+
Sbjct: 1069 KGARISDYEYLISMAIGTLTIERVQALLADRDKANAEVDELRKSTPRSLWLKDLDALEME 1128

Query: 1181 LDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEM-- 1238
            LD L+KS+A AEE + K +         K  +K+APK  RKN KK+NNA A  ++ E+  
Sbjct: 1129 LDVLEKSEALAEEAKKKARTQVKNVPASK-ASKQAPK-PRKNTKKANNAEAASSVMEIAR 1186

Query: 1239 ---------DNVTKVV--------KPKG-----RAGLKKAPAEK---------------- 1260
                     D  T ++        + +G     R+G K++   +                
Sbjct: 1187 RYYFIIEFSDCFTHIISSACFVRERSRGSEKDRRSGSKESSCCQEVEQIRCTQEAGTYIF 1246

Query: 1261 ------------LDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAK 1308
                        L DD++DEV +LK+RLA  N       L+ SP+ S     +KV    +
Sbjct: 1247 MFVMQQVKSSAVLSDDDDDEVLELKERLAAYN-------LDSSPENSA--GNDKV---VQ 1294

Query: 1309 KKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIAAPEEGKKGGRKAAGNSKA--AKP 1366
            KKE      A KKVV    S        DDD   EIAA  +G  G +KAAG  K   +KP
Sbjct: 1295 KKE------ANKKVVMQMDS--------DDDFEEEIAAAPKG--GRKKAAGKPKVAASKP 1338

Query: 1367 AAETKKRG-PAKKQQPEASLGQRLLTEMLKPAES---SPEKKVRKMRASPFNKKSGSMLG 1422
             A  KKRG  A K+QP+ S GQ+LLT+MLKPAES   SPE KVRKMRASPFNKKSGS++G
Sbjct: 1339 PAAAKKRGTAANKKQPQTSSGQKLLTDMLKPAESSRASPEPKVRKMRASPFNKKSGSVMG 1398

Query: 1423 RAGTIEEPSGS-----SPSTSEEVAEVLPPKARPQRANRRQARYVLSDSESEKATDDSEF 1477
            R G  +E + S     SPS  E     +  +ARPQRANRRQ RYVLSDSESE A++DS+F
Sbjct: 1399 RVGLADEMTESDDKVDSPSAEERSEAPVAARARPQRANRRQTRYVLSDSESEPASEDSDF 1458

Query: 1478 D--EDEDED 1484
            D  +D DED
Sbjct: 1459 DAVDDIDED 1467


>gi|449463998|ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis sativus]
          Length = 1459

 Score = 1874 bits (4854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1006/1548 (64%), Positives = 1158/1548 (74%), Gaps = 153/1548 (9%)

Query: 1    MTVDKRLPLTTSNNANV-VGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALW 59
            M V+K+ PL  SN ANV   P  P KTIEEMYQKKSQLEHILLRPDTY+GSIEKHTQ LW
Sbjct: 1    MVVEKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 60

Query: 60   IYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNS 119
            +YE E   M+HR+ISYVPGLYKIFDEILVNAADNKQRDP MD+VKV ID E + ISV N+
Sbjct: 61   VYENEK--MVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNN 118

Query: 120  GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
            GDGVPVEIHQEE VYVPELIFGHLLTSSNYDD  KKTTGGRNGYGAKLTNIFS+EF+IET
Sbjct: 119  GDGVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIET 178

Query: 180  ADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK 239
            ADG+RLKKYKQVF +NMGKKSEP I+KCK GDNWT+V+FKPDL KFNMTHLEDDVVALMK
Sbjct: 179  ADGRRLKKYKQVFNDNMGKKSEPIITKCKAGDNWTRVTFKPDLEKFNMTHLEDDVVALMK 238

Query: 240  KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVT--------RFHERVNERWEI 291
            KRV+DLAGCLGK+VKVELNG RVPV+SF +YVD+Y KS +        R+H R NERWEI
Sbjct: 239  KRVLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEI 298

Query: 292  CVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHL 351
             VTLSEGQFQQVSFVNGIATIKGGTHV+Y+ NQ+AN VM  VNKKNKNANVKAHNVK++L
Sbjct: 299  VVTLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYL 358

Query: 352  WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQ 411
            WVF+NALIDNP+FDSQTKETLT R +SFGS CEL+ +FLK V  KSGI++++LSW NFKQ
Sbjct: 359  WVFINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQ 418

Query: 412  SKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDR 471
            SKDLKK DG KTE + GI KLEDAN AGG+NSE+CTLILTEGDSAKALAMAGL VVGRD 
Sbjct: 419  SKDLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDF 478

Query: 472  FGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQV 531
            +GVFPLRGKLLNVREASS Q  + S I  +                              
Sbjct: 479  YGVFPLRGKLLNVREASSKQDHDGSHIKGL------------------------------ 508

Query: 532  LLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI 591
                   L+ FI  F W +              +   L+ FI                  
Sbjct: 509  -------LINFIHSF-WPSLL-----------RVPSFLVEFI------------------ 531

Query: 592  TPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 651
            TPIVKAT+KNG VLSFY+MP+YEAWKESL GNAS WSIKYYKGLGTSTSKEG+EYF+ +T
Sbjct: 532  TPIVKATHKNGTVLSFYTMPEYEAWKESLRGNASGWSIKYYKGLGTSTSKEGREYFEQLT 591

Query: 652  LHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELI 711
             HKKDF+W+DD DGEAIELAFSKKKIE RK WL QFEPG HLDQ  K IKYSDFVNKELI
Sbjct: 592  KHKKDFIWQDDNDGEAIELAFSKKKIEDRKNWLRQFEPGTHLDQTGKLIKYSDFVNKELI 651

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKV+QFSGYVSEHSAYHHGEQSL
Sbjct: 652  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSL 711

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
            ASTI+GMAQDFVGSNNINLL PNGQFGTRN GGKD AS+RYI+T+LS +TRFLFP+DDDK
Sbjct: 712  ASTIIGMAQDFVGSNNINLLLPNGQFGTRNHGGKDHASSRYIYTKLSNVTRFLFPRDDDK 771

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            LL+YLNEDGQ IEPTWYMPIIPTVLVNGSEGIGTGWSSY+PNYNPRDI+ NVRR+L GE 
Sbjct: 772  LLNYLNEDGQSIEPTWYMPIIPTVLVNGSEGIGTGWSSYVPNYNPRDIIRNVRRMLEGET 831

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLE 951
            M PM PWYRGF GTIEKTA+KE G TYTV+GIIEEV++TTLRI ELP+RRWT DY++FL+
Sbjct: 832  MLPMDPWYRGFSGTIEKTATKEGGTTYTVSGIIEEVSDTTLRIVELPVRRWTSDYKDFLD 891

Query: 952  SII------DQN------DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLT 999
            S+       D++      D FI     +SDD  V  +V L+EE+M+   QEGL KKFKLT
Sbjct: 892  SVTRVASKHDKDKEKAAKDPFIEQADHHSDDKIVSIDVHLTEENMLLAIQEGLKKKFKLT 951

Query: 1000 TTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKV 1059
            TT+STSNMHLFD+ GVIKKYDTPEQILEEFF +RLEFYEKRK++ L+NLE+ELLKLENKV
Sbjct: 952  TTVSTSNMHLFDANGVIKKYDTPEQILEEFFPLRLEFYEKRKRILLDNLEMELLKLENKV 1011

Query: 1060 RFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEV 1119
            RFIL VVN EI V+NRK+ DL  EL+ KGFTPFPK +KS+E  +AGA++ET+E+EE+PEV
Sbjct: 1012 RFILAVVNEEIKVSNRKKVDLFHELQAKGFTPFPKKTKSVEPEIAGASNETDEAEESPEV 1071

Query: 1120 VNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
            V G +  DY+YLL++ IGTLT+EKVQ L +DRDKL  EVDDLRKATP+SLW+ DLD L+ 
Sbjct: 1072 VKGERISDYEYLLALPIGTLTIEKVQELCSDRDKLKGEVDDLRKATPKSLWLNDLDYLEK 1131

Query: 1180 QLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMD 1239
            +LDE+D++DA+  E R + +   N D  PK V++ APK  R + K SN    TE+M    
Sbjct: 1132 ELDEMDRNDAQTMELRKQQREKANIDLKPK-VSRNAPKAPRNSKKTSNVETVTESMDTTY 1190

Query: 1240 NVTK-------VVKPKGRAGLK--KAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEP 1290
            + T        VVKPKG+A  +   A  +      +D+  D    + +L ++LA+ K+E 
Sbjct: 1191 SSTTTEVANNPVVKPKGKAAPRKAPAKKKGKAAVLDDDEDDEDDEVLELKDRLAAYKIES 1250

Query: 1291 SPDQSGV--METEKVQV---PAKKKEPSKRTAAQKKVV--TVETSDSEDEIIIDDDEAFE 1343
            SP+ S V  METE  +V    AKKKEPSKR  A+KK    + + S S+D    D+D  FE
Sbjct: 1251 SPEPSEVSAMETEVQEVQQQAAKKKEPSKRAPAKKKTTAKSAQISISDD----DNDGDFE 1306

Query: 1344 I---------AAPEEGKKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEML 1394
            I              G  G + AAGNSK  KP A              A LGQ+L+T+ML
Sbjct: 1307 IKEVDPPAAKKGGGRGGGGRKAAAGNSKTTKPPAAG------------AKLGQKLITQML 1354

Query: 1395 KPAES----SPEKKVRKMRASPFNKKSGSMLGRA-GTIEEP---------SGSSPSTSEE 1440
            +PA      SPEKKVRK+RASPFNKKSGS+LGR  G  EE            +S  TSEE
Sbjct: 1355 EPAAENSGISPEKKVRKIRASPFNKKSGSLLGRTIGEEEEDENDDEGKLMGSASFETSEE 1414

Query: 1441 VAEVLPPKARPQRANR-RQARYVLSDSESEKATDDSEFDEDE---DED 1484
            V      + R +RANR  Q RYVLSDS+ E A+ DS+FDEDE   DED
Sbjct: 1415 VQLA---RGRSRRANRTTQVRYVLSDSDGEVASQDSDFDEDEASLDED 1459


>gi|449516699|ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis
            sativus]
          Length = 1460

 Score = 1873 bits (4851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1006/1549 (64%), Positives = 1158/1549 (74%), Gaps = 154/1549 (9%)

Query: 1    MTVDKRLPLTTSNNANV-VGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALW 59
            M V+K+ PL  SN ANV   P  P KTIEEMYQKKSQLEHILLRPDTY+GSIEKHTQ LW
Sbjct: 1    MVVEKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 60

Query: 60   IYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNS 119
            +YE E   M+HR+ISYVPGLYKIFDEILVNAADNKQRDP MD+VKV ID E + ISV N+
Sbjct: 61   VYENEK--MVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNN 118

Query: 120  GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
            GDGVPVEIHQEE VYVPELIFGHLLTSSNYDD  KKTTGGRNGYGAKLTNIFS+EF+IET
Sbjct: 119  GDGVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIET 178

Query: 180  ADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK 239
            ADG+RLKKYKQVF +NMGKKSEP I+KCK GDNWT+V+FKPDL KFNMTHLEDDVVALMK
Sbjct: 179  ADGRRLKKYKQVFNDNMGKKSEPIITKCKAGDNWTRVTFKPDLXKFNMTHLEDDVVALMK 238

Query: 240  KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVT--------RFHERVNERWEI 291
            KRV+DLAGCLGK+VKVELNG RVPV+SF +YVD+Y KS +        R+H R NERWEI
Sbjct: 239  KRVLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEI 298

Query: 292  CVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHL 351
             VTLSEGQFQQVSFVNGIATIKGGTHV+Y+ NQ+AN VM  VNKKNKNANVKAHNVK++L
Sbjct: 299  VVTLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYL 358

Query: 352  WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQ 411
            WVF+NALIDNP+FDSQTKETLT R +SFGS CEL+ +FLK V  KSGI++++LSW NFKQ
Sbjct: 359  WVFINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQ 418

Query: 412  SKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDR 471
            SKDLKK DG KTE + GI KLEDAN AGG+NSE+CTLILTEGDSAKALAMAGL VVGRD 
Sbjct: 419  SKDLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDF 478

Query: 472  FGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQV 531
            +GVFPLRGKLLNVREASS Q  + S I  +                              
Sbjct: 479  YGVFPLRGKLLNVREASSKQDHDGSHIKGL------------------------------ 508

Query: 532  LLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI 591
                   L+ FI  F W +              +   L+ FI                  
Sbjct: 509  -------LINFIHSF-WPSLL-----------RVPSFLVEFI------------------ 531

Query: 592  TPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 651
            TPIVKAT+KNG VLSFY+MP+YEAWKESL GNAS WSIKYYKGLGTSTSKEG+EYF+ +T
Sbjct: 532  TPIVKATHKNGTVLSFYTMPEYEAWKESLRGNASGWSIKYYKGLGTSTSKEGREYFEQLT 591

Query: 652  LHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELI 711
             HKKDF+W+DD DGEAIELAFSKKKIE RK WL QFEPG HLDQ  K IKYSDFVNKELI
Sbjct: 592  KHKKDFIWQDDNDGEAIELAFSKKKIEDRKNWLRQFEPGTHLDQTGKLIKYSDFVNKELI 651

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKV+QFSGYVSEHSAYHHGEQSL
Sbjct: 652  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSL 711

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
            ASTI+GMAQDFVGSNNINLL PNGQFGTRN GGKD AS+RYI+T+LS +TRFLFP+DDDK
Sbjct: 712  ASTIIGMAQDFVGSNNINLLLPNGQFGTRNHGGKDHASSRYIYTKLSNVTRFLFPRDDDK 771

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            LL+YLNEDGQ IEPTWYMPIIPTVLVNGSEGIGTGWSSY+PNYNPRDI+ NVRR+L GE 
Sbjct: 772  LLNYLNEDGQSIEPTWYMPIIPTVLVNGSEGIGTGWSSYVPNYNPRDIIRNVRRMLEGET 831

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLE 951
            M PM PWYRGF GTIEKTA+KE G TYTV+GIIEEV++TTLRI ELP+RRWT DY++FL+
Sbjct: 832  MLPMDPWYRGFSGTIEKTATKEGGTTYTVSGIIEEVSDTTLRIVELPVRRWTSDYKDFLD 891

Query: 952  SII------DQN------DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLT 999
            S+       D++      D FI     +SDD  V  +V L+EE+M+   QEGL KKFKLT
Sbjct: 892  SVTRVASKHDKDKEKAAKDPFIEQADHHSDDKIVSIDVHLTEENMLLAIQEGLKKKFKLT 951

Query: 1000 TTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKV 1059
            TT+STSNMHLFD+ GVIKKYDTPEQILEEFF +RLEFYEKRK++ L+NLE+ELLKLENKV
Sbjct: 952  TTVSTSNMHLFDANGVIKKYDTPEQILEEFFPLRLEFYEKRKRILLDNLEMELLKLENKV 1011

Query: 1060 RFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEV 1119
            RFIL VVN EI V+NRK+ DL  EL+ KGFTPFPK +KS+E  +AGA++ET+E+EE+PEV
Sbjct: 1012 RFILAVVNEEIKVSNRKKVDLFHELQAKGFTPFPKKTKSVEPEIAGASNETDEAEESPEV 1071

Query: 1120 VNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
            V G +  DY+YLL++ IGTLT+EKVQ L +DRDKL  EVDDLRKATP+SLW+ DLD L+ 
Sbjct: 1072 VKGERISDYEYLLALPIGTLTIEKVQELCSDRDKLKGEVDDLRKATPKSLWLNDLDYLEK 1131

Query: 1180 QLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMD 1239
            +LDE+D++DA+  E R + +   N D  PK V++ APK  R + K SN    TE+M    
Sbjct: 1132 ELDEMDRNDAQTMELRKQQREKANIDLKPK-VSRNAPKAPRNSKKTSNVETVTESMDTTY 1190

Query: 1240 NVTK-------VVKPKGRAGLK--KAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEP 1290
            + T        VVKPKG+A  +   A  +      +D+  D    + +L ++LA+ K+E 
Sbjct: 1191 SSTTTEVANNPVVKPKGKAAPRKAPAKKKGKAAVLDDDEDDEDDEVLELKDRLAAYKIES 1250

Query: 1291 SPDQSGV--METEKVQV---PAKKKEPSKRTAAQKKVV--TVETSDSEDEIIIDDDEAFE 1343
            SP+ S V  METE  +V    AKKKEPSKR  A+KK    + + S S+D    D+D  FE
Sbjct: 1251 SPEPSEVSAMETEVQEVQQQAAKKKEPSKRAPAKKKTTAKSAQISISDD----DNDGDFE 1306

Query: 1344 I----------AAPEEGKKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEM 1393
            I               G  G + AAGNSK  KP A              A LGQ+L+T+M
Sbjct: 1307 IKEVDPPAAKKGGGRGGGGGRKAAAGNSKTTKPPAAG------------AKLGQKLITQM 1354

Query: 1394 LKPAES----SPEKKVRKMRASPFNKKSGSMLGRA-GTIEEP---------SGSSPSTSE 1439
            L+PA      SPEKKVRK+RASPFNKKSGS+LGR  G  EE            +S  TSE
Sbjct: 1355 LEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRTIGEEEEDENDDEGKLMGSASFETSE 1414

Query: 1440 EVAEVLPPKARPQRANR-RQARYVLSDSESEKATDDSEFDEDE---DED 1484
            EV      + R +RANR  Q RYVLSDS+ E A+ DS+FDEDE   DED
Sbjct: 1415 EVQLA---RGRSRRANRTTQVRYVLSDSDGEVASQDSDFDEDEASLDED 1460


>gi|41052970|dbj|BAD07880.1| putative DNA topoisomerase II [Oryza sativa Japonica Group]
          Length = 1525

 Score = 1870 bits (4844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 981/1564 (62%), Positives = 1159/1564 (74%), Gaps = 130/1564 (8%)

Query: 6    RLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES 65
            RLPL +S+  N        KTIEEMYQKK+QLEHILLRPDTYIGS+EKHT  LW+YE+ +
Sbjct: 7    RLPLQSSSGHNAAAGGGGGKTIEEMYQKKTQLEHILLRPDTYIGSVEKHTAQLWVYEDGA 66

Query: 66   KTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPV 125
              M+ R+++YVPGLYKIFDEILVNAADNKQRDP MD+++V ID +   ISV+N+GDG+PV
Sbjct: 67   --MVSRSVTYVPGLYKIFDEILVNAADNKQRDPSMDSLRVEIDADEGRISVYNNGDGIPV 124

Query: 126  EIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRL 185
            EIHQEEGVYVPE+IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEF+IETADG+R 
Sbjct: 125  EIHQEEGVYVPEMIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFVIETADGRRQ 184

Query: 186  KKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDL 245
            KKYKQVF+ NMGKKSEP I+KCK+G+NWT+V+FKPDLAKFNMTHLE+DVVALM+KRVVD+
Sbjct: 185  KKYKQVFSENMGKKSEPQITKCKQGENWTRVTFKPDLAKFNMTHLENDVVALMRKRVVDM 244

Query: 246  AGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR----------FHERVNERWEICVTL 295
            AG LGK+VKVEL+  +VPV SF++YV +Y KS ++            ++VN+RWE+CV+L
Sbjct: 245  AGTLGKTVKVELDHQKVPVHSFSDYVKLYIKSASKDRDDVNELPSISQKVNDRWEVCVSL 304

Query: 296  SEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFV 355
            SEGQFQQVSFVN IATIKGGTHVDYV NQ+A HVM +VNK+NKNA++KAHNVK+HLWVFV
Sbjct: 305  SEGQFQQVSFVNRIATIKGGTHVDYVTNQIATHVMNIVNKRNKNAHMKAHNVKSHLWVFV 364

Query: 356  NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
            NALIDNPAFDSQTKETLT RQ+SFGSKCELS++FLKKV   S IV  LLSWA FK SK+L
Sbjct: 365  NALIDNPAFDSQTKETLTTRQASFGSKCELSDDFLKKV-GSSAIVLNLLSWAEFKLSKEL 423

Query: 416  KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVF 475
            +K DG+K   + GI KLEDAN AGG++S  CTLILTEGDSAKALAMAG+SVVGRD +GVF
Sbjct: 424  QKTDGSKRSRLTGIPKLEDANGAGGKDSNNCTLILTEGDSAKALAMAGISVVGRDYYGVF 483

Query: 476  PLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAP 535
            PLRGKLLNVREAS  Q++ N+EI NIK+ILGL+ G +Y++ K LRYGHLMIMTDQ     
Sbjct: 484  PLRGKLLNVREASHKQIMENAEIQNIKQILGLQHGKQYDSTKGLRYGHLMIMTDQ----- 538

Query: 536  LSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIV 595
                                   DHDGSHIKGLLINFIHSFWPSL+KIPSFLVEFITPI+
Sbjct: 539  -----------------------DHDGSHIKGLLINFIHSFWPSLIKIPSFLVEFITPII 575

Query: 596  KATNKNGK--VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLH 653
            KATNK  K  VL FYSMP+YE WKESLGGNAS WSIKYYKGLGTSTS EG++YFQ+I  H
Sbjct: 576  KATNKRDKKIVLPFYSMPEYEQWKESLGGNASGWSIKYYKGLGTSTSSEGRQYFQDIAKH 635

Query: 654  KKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILF 713
            KKDFVW++DQD   IELAFSKK+I  RK+WL  F+ G HLD + KYIKYSDF+NKELI F
Sbjct: 636  KKDFVWKNDQDDNDIELAFSKKRITDRKEWLTNFQSGTHLDTEGKYIKYSDFINKELIQF 695

Query: 714  SMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAS 773
            SMADL RSIPSMVDGLKPGQRKILFCSFKRN +KE KVAQFSGYVSEHSAYHHGEQSLAS
Sbjct: 696  SMADLLRSIPSMVDGLKPGQRKILFCSFKRNLVKEIKVAQFSGYVSEHSAYHHGEQSLAS 755

Query: 774  TILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLL 833
            TI GMAQDFVGSNNINLLQPNGQFGTR+QGGKDAASARYIFT LSPITR +FPKDDD LL
Sbjct: 756  TITGMAQDFVGSNNINLLQPNGQFGTRDQGGKDAASARYIFTLLSPITRSIFPKDDDILL 815

Query: 834  DYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMME 893
            +YL+EDGQ IEPTWY+PI+P VLVNGSEGIGTGWS++IPNYNPRDIVAN+RRLLN E +E
Sbjct: 816  NYLDEDGQSIEPTWYVPILPMVLVNGSEGIGTGWSTFIPNYNPRDIVANLRRLLNDEPVE 875

Query: 894  PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI 953
            PM PWYRGF G+I+KT +K  GV+YTVTGIIE V++TTLRI ELPIRRW+QDY+EFL SI
Sbjct: 876  PMDPWYRGFKGSIQKTGTKAGGVSYTVTGIIEVVDDTTLRITELPIRRWSQDYKEFLISI 935

Query: 954  --------------------------IDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRT 987
                                          + FI  F  YSDD  V+F + LS+E+M   
Sbjct: 936  GGTDKSKDKDKDKGKGKGKVKEKEKKEKDIEPFIEAFDTYSDDKNVEFLITLSKENMAIA 995

Query: 988  KQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLEN 1047
             QEGL KKFKLTTTI T+NMHLFDS G I+KYDTPE IL+EFF +RLEFYEKRK+V LEN
Sbjct: 996  LQEGLEKKFKLTTTIGTTNMHLFDSNGKIRKYDTPEDILKEFFGLRLEFYEKRKRVLLEN 1055

Query: 1048 LELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGAT 1107
            +ELEL KL NKVRFIL VV G+I+VNNRKR +L +EL+QKGF PFP+  +       GA 
Sbjct: 1056 IELELKKLSNKVRFILAVVEGDIIVNNRKRAELFVELKQKGFDPFPRKKQRAGPSAVGAI 1115

Query: 1108 DETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPE 1167
            +E EE+EE+PE  N V S DY+YLLSMAIGTLTLE+VQ L+A++ ++  EV +L++  P+
Sbjct: 1116 EEDEENEESPEAAN-VGSSDYEYLLSMAIGTLTLERVQQLIAEKGRMENEVAELKRTRPK 1174

Query: 1168 SLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSN 1227
            SLW++DLDA + +LD LD+ D+   EER   +  G G A  K   KR P+    N + + 
Sbjct: 1175 SLWMRDLDAFEKELDALDEKDSMDAEERRATRNAGGGAAPNKAAPKRRPRKTATNTQAAE 1234

Query: 1228 NARATEAMGEMDNVTKVV-KPKGRAGL------------------KKAPAEK----LDDD 1264
            ++    A   +        KP G+A L                  KK PA+K    L DD
Sbjct: 1235 SSDGNAAAPAVPKPAAPRKKPAGKASLADSEDEDYIAAIPKPAAQKKQPAKKASTQLSDD 1294

Query: 1265 EEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKK--KEPSKRTAAQKKV 1322
            E+DEV  LK RLA  N        + S D +   ET + Q   KK  KEPSKR AA+K +
Sbjct: 1295 EDDEVLALKDRLAAYNLD------DHSEDTAMETETTEEQAKGKKGRKEPSKRGAAKKAI 1348

Query: 1323 --VTVETSDSEDEII-IDDDEAFEIAAPEEGKKGGRKAAGNSKAA-KPAAETKKRGPAKK 1378
              + V + D EDE + ID+D+  + A  E   K GR   G   AA KP A T+KR PA+ 
Sbjct: 1349 SSLAVISDDEEDETVPIDEDDEDDFAMEEVPVKKGR---GKKPAAEKPKAATRKRAPAQG 1405

Query: 1379 QQPEASLGQRLLTEMLKPAES------SPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSG 1432
            +    S+ Q+++ EM KP E       SPEKKVRKMRASPF+KKSGS+L RA T    + 
Sbjct: 1406 K----SMRQKVMEEMFKPTEDSSTSAPSPEKKVRKMRASPFHKKSGSVLQRASTASTSTE 1461

Query: 1433 SSPSTSEEVAEVLPPKARPQRANR-----RQARYVLSDSESE----KATDDSEF---DED 1480
             + S+S   +   P  ARP+R  R      Q    LSD ++E      +DDS+F   D  
Sbjct: 1462 ETESSSPSGSSAEPVAARPKRQTRGNKKSYQEVQELSDDDTEDEVQDISDDSDFAGSDFG 1521

Query: 1481 EDED 1484
            ED+D
Sbjct: 1522 EDDD 1525


>gi|356555329|ref|XP_003545986.1| PREDICTED: DNA topoisomerase 2-like [Glycine max]
          Length = 1484

 Score = 1858 bits (4812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 977/1505 (64%), Positives = 1146/1505 (76%), Gaps = 93/1505 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEEMYQKK+QLEHILLRPDTY+GS+EKHTQ LW+YE +   M+HR +SYVPGLYKIFD
Sbjct: 26   KTIEEMYQKKTQLEHILLRPDTYVGSVEKHTQTLWVYENDE--MVHRAVSYVPGLYKIFD 83

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDP MDA+KV I+ E + +SV N+GDGVPVEIHQEE VYVPELIFGHLL
Sbjct: 84   EILVNAADNKQRDPSMDALKVTINAEANTVSVFNNGDGVPVEIHQEEKVYVPELIFGHLL 143

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNY+DN KKTTGGRNGYGAKLTNIFSTEF+IETADGKR KKYKQVF+NNMGKKSEP I
Sbjct: 144  TSSNYNDNEKKTTGGRNGYGAKLTNIFSTEFVIETADGKRQKKYKQVFSNNMGKKSEPVI 203

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +KCK G+NWTKV+FKPDL KF M +LE+DVVALMKKRVVD+AGCLGK+VKVELNG  + +
Sbjct: 204  TKCKVGENWTKVTFKPDLEKFKMDYLEEDVVALMKKRVVDMAGCLGKTVKVELNGQVIRM 263

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            KSF +Y D+Y KS        + R H +V ERWEICV+LS+GQFQQVSFVN IATIKGGT
Sbjct: 264  KSFRDYADLYLKSAEKSRPVPLPRIHAKVGERWEICVSLSDGQFQQVSFVNSIATIKGGT 323

Query: 317  HVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            HVDYV NQ+ N VM  VNKK K+ANVKAHNVKNHLWVFVN+LIDNPAFDSQTKETLT RQ
Sbjct: 324  HVDYVTNQITNFVMNKVNKKKKDANVKAHNVKNHLWVFVNSLIDNPAFDSQTKETLTTRQ 383

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            +SFGSKC++ E  LK+V A SGIV+TLLSWA+FKQSKDLKK+DGTKT+ +RGI KLEDAN
Sbjct: 384  ASFGSKCDIPESMLKEV-ANSGIVDTLLSWADFKQSKDLKKSDGTKTQRLRGIVKLEDAN 442

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AGGRNSE+CTLILTEGDSAKALAMAGLSVVGRD +GVFPLRGKLLNVREASS Q+++N 
Sbjct: 443  DAGGRNSEKCTLILTEGDSAKALAMAGLSVVGRDHYGVFPLRGKLLNVREASSKQIMDNE 502

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI NIKKILGL+Q  EY +VKSLRYGHLMIM DQ                          
Sbjct: 503  EIQNIKKILGLQQNKEYTSVKSLRYGHLMIMADQ-------------------------- 536

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAW 616
              DHDGSHIKGLLINFIHSFWPSLLK+PSF+VEF TPI++A + NG  LSFYSMP+YE+W
Sbjct: 537  --DHDGSHIKGLLINFIHSFWPSLLKVPSFMVEFTTPIIRAFHSNGTKLSFYSMPEYESW 594

Query: 617  KESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKK 676
            +ESLG NA+ W IKYYKGLGTST +EG+EYF+++  HKKDFVW+D+QDG AIE+AFSKKK
Sbjct: 595  RESLGNNATGWKIKYYKGLGTSTPQEGREYFRDLDKHKKDFVWDDEQDGGAIEMAFSKKK 654

Query: 677  IEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKI 736
             E RK W+  FEPG   D   KYI Y DFVNKELIL+S ADLQRSIPSMVDGLKPGQRKI
Sbjct: 655  AEDRKIWIRNFEPGTCRDHMAKYINYRDFVNKELILYSRADLQRSIPSMVDGLKPGQRKI 714

Query: 737  LFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQ 796
            LFCSFK+   KE KV QF GYVSEHSAYHHGEQSLASTI+ MAQDFVGSNNINLL+PNGQ
Sbjct: 715  LFCSFKKKLSKEIKVGQFIGYVSEHSAYHHGEQSLASTIINMAQDFVGSNNINLLKPNGQ 774

Query: 797  FGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVL 856
            FGTRN GGKD ASARYI+T L+ ITR +F +DDDKLL+YLNEDG+ IEP WY+P+IP VL
Sbjct: 775  FGTRNLGGKDHASARYIYTELNTITRCIFHEDDDKLLEYLNEDGRCIEPNWYIPVIPLVL 834

Query: 857  VNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGV 916
            VNGSEGIGTGWSSYIPNYNPRDI+ANVRRLL+GE M PM PWY+GF GTIE++  KE G 
Sbjct: 835  VNGSEGIGTGWSSYIPNYNPRDIIANVRRLLSGETMVPMDPWYKGFKGTIERSP-KEGG- 892

Query: 917  TYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN----DSFIRGFRQYSDDTT 972
             Y V G +EE+NE T RI ELP+R+WTQDY++FLESI D +    D  I  FRQ  DD T
Sbjct: 893  -YVVNGSVEEINEQTFRITELPVRKWTQDYKQFLESITDGSPNVKDPLIDDFRQNGDDAT 951

Query: 973  VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
            VD EV +  E ++   QEGLLKKFKLT++IST+NMHLFD++G IKKYD PEQILEEFF +
Sbjct: 952  VDIEVRMKLEKIVGIMQEGLLKKFKLTSSISTNNMHLFDAEGKIKKYDNPEQILEEFFPL 1011

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            RLE+YE+RKK  L NLE  LL L+NKVRFILGVVNGEIVV+NRK+ +LL+EL+QKGFTP 
Sbjct: 1012 RLEYYERRKKHILNNLEQLLLILDNKVRFILGVVNGEIVVSNRKKAELLIELQQKGFTPM 1071

Query: 1093 PKNSKSIEAVVAGATDETEESEENPE------VVNGVQSIDYDYLLSMAIGTLTLEKVQG 1146
            P+  KS E  VAGA DE E+ ++N         V GV+  DY+YLLSM+IGTLTLE VQ 
Sbjct: 1072 PRKGKSAEPQVAGANDEEEQEDDNNTREQETGSVEGVKRGDYEYLLSMSIGTLTLEAVQK 1131

Query: 1147 LLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDA 1206
            LLA++ +  +E + L+    +SLW+KDLD L+ +LD++D  +A  E +R         + 
Sbjct: 1132 LLAEKAEKEKEFEILKATPSKSLWLKDLDELENKLDDIDSIEAEEERKRSSQANRKTSNR 1191

Query: 1207 GPKIVAKRAPKNARKNDKKSNNARA--TEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDD 1264
            G    AK+ P+  RK  KK+ N       +  E++NV +V KPKGRAG K    +     
Sbjct: 1192 GVTKAAKKPPQ-PRKYTKKAKNVEPENDNSSMEIENVAEVAKPKGRAGSKN--TQNTQPV 1248

Query: 1265 EEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKKE-PSKRTAAQKK-- 1321
             EDE+  L++RLA  N          S D S  METE+   PA+KKE P +R AA+KK  
Sbjct: 1249 AEDEIVSLQERLAAYN-------FGASSDISEGMETEEPSAPAEKKEGPKRRGAAKKKSS 1301

Query: 1322 VVTVETSDSEDEI----IIDDDEAFEIAAPEEG--KKGGRKAAGNSKAAKPAAETKKRGP 1375
             + ++ SDS++E+      DDDE FEI  P     KKGGRK A  +    PAA  +KR  
Sbjct: 1302 AIVLDDSDSDNEVHNVDDDDDDEDFEIMQPVAPGRKKGGRKPAAQNAKKAPAAAARKRNV 1361

Query: 1376 AKKQQPEASLGQRLLTEMLKPAESSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSP 1435
              KQ     LGQ+L+T+ML+    SPEKKVRKMRASPFNKKS S+LGR    ++    S 
Sbjct: 1362 GGKQS--QFLGQKLITDMLESTGISPEKKVRKMRASPFNKKSSSVLGRVAAADKDESVSK 1419

Query: 1436 -------------STSEEVAEVLPP--KARPQRANRRQARYVLSDSESEKATDD---SEF 1477
                         S +EEV E+ PP  +ARPQRANRRQ  YVLS+SES+  +D+   S+F
Sbjct: 1420 DLSGGSDASSSSPSITEEVVEIAPPAARARPQRANRRQTTYVLSESESDNDSDNEDYSDF 1479

Query: 1478 DEDED 1482
            +EDED
Sbjct: 1480 EEDED 1484


>gi|70568834|dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis]
          Length = 1469

 Score = 1848 bits (4787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 973/1536 (63%), Positives = 1152/1536 (75%), Gaps = 119/1536 (7%)

Query: 1    MTVDKRLPLTTSNNANVVGPTAPN----KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQ 56
            M   K+ PLTTSNNAN+  P A      KTIE+ YQKK+QLEHILLRPDTYIGSIE+HTQ
Sbjct: 1    MAGGKKGPLTTSNNANIPPPDAAGGGSKKTIEQAYQKKTQLEHILLRPDTYIGSIERHTQ 60

Query: 57   ALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISV 116
             LW+YE E   M+ ++I+YVPGLYKIFDEILVNAADNKQRDPKM++VKV ID E + ISV
Sbjct: 61   TLWVYENEQ--MVQKSITYVPGLYKIFDEILVNAADNKQRDPKMNSVKVTIDVESNCISV 118

Query: 117  HNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFI 176
            +N+GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN KKTTGGRNGYGAKLTNIFSTEF+
Sbjct: 119  YNNGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNEKKTTGGRNGYGAKLTNIFSTEFV 178

Query: 177  IETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVA 236
            IETADGKR KKYKQVF+NNMG KSEP ISK + GD+WTK++FKPDLAKFNMT LEDD VA
Sbjct: 179  IETADGKREKKYKQVFSNNMGTKSEPIISKRQAGDDWTKITFKPDLAKFNMTCLEDDTVA 238

Query: 237  LMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVT--------RFHERVNER 288
            LMKKRV+D+AGCLGK+VKVELNG +   KSF+ Y D+Y KS +        RF E V+ER
Sbjct: 239  LMKKRVIDIAGCLGKTVKVELNGQKFHFKSFSSYCDLYMKSTSVSSLDPLPRFEEEVHER 298

Query: 289  WEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA---NVKAH 345
            W+I V+ SEGQFQQVSFVNGIATIKGGTHVDYV N++ +H++ V+  KNK     ++K H
Sbjct: 299  WQIFVSRSEGQFQQVSFVNGIATIKGGTHVDYVTNKITSHLVNVIKNKNKKNKKFDLKPH 358

Query: 346  NVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLS 405
             VKNHLWVFVNALIDNPAFDSQTKETLTLR +SFGS  + S  FL +V AKS I++ +  
Sbjct: 359  TVKNHLWVFVNALIDNPAFDSQTKETLTLRAASFGSSWDFSSNFLDRV-AKSDIMKNIEE 417

Query: 406  WANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLS 465
            WA FKQ KDLKK DG+K   + G++KL DAN AGGRNS++CTLILTEGDSAKALA+AGLS
Sbjct: 418  WAEFKQKKDLKKTDGSKDRRIYGLAKLSDANEAGGRNSDKCTLILTEGDSAKALAIAGLS 477

Query: 466  VVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLM 525
            VVGRD +GVFPLRGKLLNVREAS NQ+++N EI +IK+ILGL+ G +Y +VK LRYGHLM
Sbjct: 478  VVGRDHYGVFPLRGKLLNVREASHNQLMHNLEIQHIKQILGLQHGKQYESVKPLRYGHLM 537

Query: 526  IMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPS 585
            IMTDQ                            DHDGSHIKGLLINFIHSFWPSLLKIPS
Sbjct: 538  IMTDQ----------------------------DHDGSHIKGLLINFIHSFWPSLLKIPS 569

Query: 586  FLVEFITPIVKATNKNGKV-LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGK 644
            FL+ FITPIVKA +K+GK  LSFY+MP YEAWKE+ G  A +W++KYYKGLGTST +E  
Sbjct: 570  FLLGFITPIVKARHKDGKRKLSFYTMPQYEAWKEAQGTEAKNWTVKYYKGLGTSTDQEAM 629

Query: 645  EYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSD 704
            EYF ++  H+KDFV+ D +D +AIELAFSKKKIEARK WL QFEPG  LD ++ +IKY D
Sbjct: 630  EYFSDLGKHEKDFVYVDGEDDDAIELAFSKKKIEARKGWLRQFEPGTFLDDRDSHIKYRD 689

Query: 705  FVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAY 764
            FV+KELILFS+AD+QRSIPSMVDGLKPGQRKILFCSFKRNF++EAKVAQFSGYVSEHSAY
Sbjct: 690  FVHKELILFSIADVQRSIPSMVDGLKPGQRKILFCSFKRNFVREAKVAQFSGYVSEHSAY 749

Query: 765  HHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFL 824
            HHGEQSLA TI+GMAQD+VGSNNINLL P GQFGTR QGGKD ASARY+FT+LSP+TRFL
Sbjct: 750  HHGEQSLAGTIIGMAQDYVGSNNINLLLPIGQFGTRGQGGKDHASARYVFTQLSPVTRFL 809

Query: 825  FPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVR 884
            FPK DD LLDYLNEDGQ IEPTWY+PIIP VLVNGSEGIGTGWSSY+PNYNP DI+AN+R
Sbjct: 810  FPKADDILLDYLNEDGQSIEPTWYVPIIPMVLVNGSEGIGTGWSSYVPNYNPVDIIANIR 869

Query: 885  RLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQ 944
             LLN E  EPMHPWY+GF G++EKTA+KEAG +YTV+GIIEEV++TTL IKELPIRRWTQ
Sbjct: 870  HLLNDEATEPMHPWYKGFLGSVEKTATKEAGASYTVSGIIEEVDDTTLCIKELPIRRWTQ 929

Query: 945  DYREFLESIIDQNDS----FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTT 1000
            DY+EFLES+  +ND     FI G R YS    V+F V +  E +   K+EGLLKKFKLTT
Sbjct: 930  DYKEFLESVSAENDKSKDPFIEGCRDYSGSELVNFLVGMKPEKLEAAKREGLLKKFKLTT 989

Query: 1001 TISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVR 1060
            +IST NMHLFDSKGVIKKYDTPEQILEEFF+IRLE YEKRKKV L+ LE ++LK +NK R
Sbjct: 990  SISTCNMHLFDSKGVIKKYDTPEQILEEFFYIRLELYEKRKKVLLDILEHDMLKCDNKYR 1049

Query: 1061 FILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEV- 1119
            FI  VV G I+V+NRKRTD+  EL++KGFTPFPK     E  +AGATD+ EE+EEN EV 
Sbjct: 1050 FIRCVVEGSIIVSNRKRTDVFRELKEKGFTPFPKKKNRAEVAIAGATDDGEETEENSEVP 1109

Query: 1120 -VNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
               GV S DYDYLLS+AIGTLT EK+Q L A+RDKL +EV++L+++T  SLW KDLDAL+
Sbjct: 1110 IAPGVSSSDYDYLLSLAIGTLTTEKMQELRAERDKLMQEVEELKQSTARSLWNKDLDALE 1169

Query: 1179 MQLDELDK-SDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGE 1237
             +L E  K  +   E+ + KI G  +         +   KN RKN K +    A E M  
Sbjct: 1170 DKLAEEQKIYEETWEKNKRKIHGKTD-------TLEIIQKNPRKNKKTTKKESAVE-MEI 1221

Query: 1238 MDNVTKVVKPK---------------GRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQ 1282
             +N T     K                   +  AP E+ +DD  D + DL+QR+A  N  
Sbjct: 1222 SENTTTETDVKIKKPRGKAAAKKKEPAAKVVTAAPVEEQEDD--DGIADLRQRIAAYN-- 1277

Query: 1283 LASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAF 1342
                  + SPD S  M TE   V  K K+P++R AAQKK ++  +   E      DD+AF
Sbjct: 1278 -----FDSSPDHSEDMATEVAPVQTKNKQPARRGAAQKKTLSAASETDE------DDDAF 1326

Query: 1343 EIAAPEEGKKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKP-AESSP 1401
            E    +      +K      AAK  A  KKRGP+ KQ  +  +GQ+L+TE+LKP A+ SP
Sbjct: 1327 EPEEKK------KKGGRKPAAAKAPAAAKKRGPSAKQSSQL-VGQKLITEVLKPAADDSP 1379

Query: 1402 EKKVRKMRASPFNKKSGSMLGRAGTI-----EEPSGSSPSTSEEVAEVLPPKARPQRANR 1456
            EKKVR+MR SPFNKKS S+LG+   I     EE SG+S S +E  A      ARP+RANR
Sbjct: 1380 EKKVRRMRESPFNKKSSSILGKTINIDDDDEEETSGTS-SMNEGAA-----AARPKRANR 1433

Query: 1457 RQARYVLSDSESEKA-------TDDSEFDED-EDED 1484
             +A+YV+SDSES+         +D+S+F++D EDE+
Sbjct: 1434 GKAKYVISDSESDPTEILVDSDSDESDFNDDSEDEN 1469


>gi|15229538|ref|NP_189031.1| DNA topoisomerase 2 [Arabidopsis thaliana]
 gi|1174740|sp|P30182.2|TOP2_ARATH RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|474890|gb|AAA65448.1| topoisomerase II [Arabidopsis thaliana]
 gi|9294657|dbj|BAB03006.1| DNA topoisomerase II [Arabidopsis thaliana]
 gi|332643305|gb|AEE76826.1| DNA topoisomerase 2 [Arabidopsis thaliana]
          Length = 1473

 Score = 1819 bits (4712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 967/1510 (64%), Positives = 1137/1510 (75%), Gaps = 99/1510 (6%)

Query: 6    RLPLTTSNNANVVGPTAPN------KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALW 59
            +LPL  SN ANV    A +      KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQ LW
Sbjct: 4    KLPLQNSNAANVAKAPAKSRAAAGGKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQTLW 63

Query: 60   IYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNS 119
            +YE++   M+ R ++YVPGLYKIFDEILVNAADNKQRD KMD+V+VVID E +LISV NS
Sbjct: 64   VYEKDE--MVQRPVTYVPGLYKIFDEILVNAADNKQRDAKMDSVQVVIDVEQNLISVCNS 121

Query: 120  GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
            G GVPVEIHQEEG+YVPE+IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET
Sbjct: 122  GAGVPVEIHQEEGIYVPEMIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 181

Query: 180  ADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK 239
            ADGKRLKKYKQVF NNMGKKSEP I+KC + +NWTKV+FKPDL KFNMT LEDDVVALM 
Sbjct: 182  ADGKRLKKYKQVFENNMGKKSEPVITKCNKSENWTKVTFKPDLKKFNMTELEDDVVALMS 241

Query: 240  KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS---------VTRFHERVNERWE 290
            KRV D+AGCLGKSVKVELNG ++PVKSF +YVD+Y  +         + R  E+VN+RWE
Sbjct: 242  KRVFDIAGCLGKSVKVELNGKQIPVKSFTDYVDLYLSAANKSRTEDPLPRLTEKVNDRWE 301

Query: 291  ICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNH 350
            +CV+LSEGQFQQVSFVN IATIKGGTHVDYV +Q+ NH++A VNKKNKNANVKAHNVKNH
Sbjct: 302  VCVSLSEGQFQQVSFVNSIATIKGGTHVDYVTSQITNHIVAAVNKKNKNANVKAHNVKNH 361

Query: 351  LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFK 410
            LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE+FLKKV  KSG+VE LLSWA+FK
Sbjct: 362  LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKV-GKSGVVENLLSWADFK 420

Query: 411  QSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD 470
            Q+KDLKK+DG KT  V  + KL+DA  AGG+NS  CTLILTEGDSAK+LA+AG SV+G +
Sbjct: 421  QNKDLKKSDGAKTGRVL-VEKLDDAAEAGGKNSRLCTLILTEGDSAKSLALAGRSVLGNN 479

Query: 471  RFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQ 530
              GVFPLRGKLLNVREAS+ Q+ NN EI N+KKILGLKQ ++Y NV SLRYG +MIMTDQ
Sbjct: 480  YCGVFPLRGKLLNVREASTTQITNNKEIENLKKILGLKQNMKYENVNSLRYGQMMIMTDQ 539

Query: 531  VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
                                        DHDGSHIKGLLINFIHSFWPSLL++PSFLVEF
Sbjct: 540  ----------------------------DHDGSHIKGLLINFIHSFWPSLLQVPSFLVEF 571

Query: 591  ITPIVKATNKNGK-VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
            ITPIVKAT K  K VLSFYSMP+YE WKESL GNA+ W IKYYKGLGTST++EGKEYF N
Sbjct: 572  ITPIVKATRKGTKKVLSFYSMPEYEEWKESLKGNATGWDIKYYKGLGTSTAEEGKEYFSN 631

Query: 650  ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKE 709
            + LHKKDFVWED+QDGEAIELAFSKKKIEARK WL  + PGNHLDQ++  + YSDFVNKE
Sbjct: 632  LGLHKKDFVWEDEQDGEAIELAFSKKKIEARKNWLSSYVPGNHLDQRQPKVTYSDFVNKE 691

Query: 710  LILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQ 769
            LILFSMADLQRSIPSMVDGLKPGQRKILF +FK+   KE KVAQ  GYVS  SAYHHGEQ
Sbjct: 692  LILFSMADLQRSIPSMVDGLKPGQRKILFVAFKKIARKEMKVAQLVGYVSLLSAYHHGEQ 751

Query: 770  SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
            SLAS I+GMAQD+VGSNNINLL PNGQFGTR  GGKD+ASARYIFT+LSP+TR LFPKDD
Sbjct: 752  SLASAIIGMAQDYVGSNNINLLLPNGQFGTRTSGGKDSASARYIFTKLSPVTRILFPKDD 811

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
            D LLDYLNEDGQ+IEPTWYMPIIPTVLVNG+EGIGTGWS++IPNYNPR+IVANVRRLLNG
Sbjct: 812  DLLLDYLNEDGQRIEPTWYMPIIPTVLVNGAEGIGTGWSTFIPNYNPREIVANVRRLLNG 871

Query: 890  EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREF 949
            E M PM PWYRGF GTIEKTASKE G TYT+TG+ EEV+ETT+RI ELPIRRW  DY+ F
Sbjct: 872  ESMVPMDPWYRGFKGTIEKTASKEGGCTYTITGLYEEVDETTIRITELPIRRWNDDYKNF 931

Query: 950  LESI-IDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMH 1008
            L+S+  D    F +  + Y+D+ +VDF++ LSEE+M+  +QEG LKKFKLTTTI+TSNMH
Sbjct: 932  LQSLKTDNGAPFFQDVKAYNDEKSVDFDLILSEENMLAARQEGFLKKFKLTTTIATSNMH 991

Query: 1009 LFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNG 1068
            LFD KGVIKKY TPEQILEEFF +R E+YEKRK+  ++N+E+ELLKLENK RFIL V++G
Sbjct: 992  LFDKKGVIKKYVTPEQILEEFFDLRFEYYEKRKETVVKNMEIELLKLENKARFILAVLSG 1051

Query: 1069 EIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDE--TEESEE---NPEVVNG- 1122
            EI+VN RK+ D++ +LRQKGFTPFP+ ++S+EA +AGA D+   EE EE   +PE  +  
Sbjct: 1052 EIIVNKRKKADIVEDLRQKGFTPFPRKAESVEAAIAGAVDDDAAEEPEEILVDPESSSSY 1111

Query: 1123 VQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
            +   +YDYLL+MAI +LT+EKV+ LLADRDK+   V D++K TP+SLW+ DL++LD +L+
Sbjct: 1112 IPGSEYDYLLAMAIASLTIEKVEELLADRDKMIIAVADMKKTTPKSLWLSDLESLDKELE 1171

Query: 1183 ELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATE-------AM 1235
            +LD  DA+ ++     +      +G  +  KR         K +  A  +E       AM
Sbjct: 1172 KLDLKDAQVQQAIEAAQKKIRAKSGAAVKVKRQAPKKPAPKKTTKKASESETTEASYSAM 1231

Query: 1236 GEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQS 1295
               +NV +VVKPK R G KK  +E    +      D    +A++        ++P   Q 
Sbjct: 1232 DTDNNVAEVVKPKARQGAKKKASESETTEASHSAMDTDNNVAEV--------VKPKGRQG 1283

Query: 1296 G----------VMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIA 1345
                       V E E + +  +  + +  +A      T ETS +      DDD   E+A
Sbjct: 1284 AKKKAPAAAKEVEEDEMLDLAQRLAQYNFGSAPADSSKTAETSKAIAVDDDDDDVVVEVA 1343

Query: 1346 APEEGKKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKPAESSPEKKV 1405
              ++G        G   AA  AA+       + +Q  AS      TE+L     SPEKKV
Sbjct: 1344 PVKKG--------GRKPAATKAAKPPAAPRKRGKQTVAS------TEVLAIG-VSPEKKV 1388

Query: 1406 RKMRASPFNKKSGSMLGR-AGTIEEPSG---SSPSTSEEVAEVLPPKARPQRANRRQARY 1461
            RKMR+SPFNKKS S++ R A   EE S    +  S+SE+    +   +RPQRANRR+  Y
Sbjct: 1389 RKMRSSPFNKKSSSVMSRLADNKEEESSENVAGNSSSEKSGGDVSAISRPQRANRRKMTY 1448

Query: 1462 VLSDSESEKA 1471
            VLSDSESE A
Sbjct: 1449 VLSDSESESA 1458


>gi|357137146|ref|XP_003570162.1| PREDICTED: DNA topoisomerase 2-like [Brachypodium distachyon]
          Length = 1494

 Score = 1815 bits (4701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 945/1522 (62%), Positives = 1125/1522 (73%), Gaps = 119/1522 (7%)

Query: 5    KRLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEE 64
            K+ PL +S++ N V      KTIEEMYQKK+QLEHILLRPDTYIGS+EKHTQ LW+Y++ 
Sbjct: 6    KKPPLKSSSSHNSVAGGGAGKTIEEMYQKKTQLEHILLRPDTYIGSVEKHTQPLWVYDDG 65

Query: 65   SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
            +  M+HR ++YVPGLYKIFDEILVNAADNKQRDPKMD+++V ID E   +SV+N+GDG+P
Sbjct: 66   A--MVHRPVTYVPGLYKIFDEILVNAADNKQRDPKMDSLRVFIDVEGCCVSVYNNGDGIP 123

Query: 125  VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
            VEIHQ EGVYVPE+IFGHLLTSSNY+DN +KTTGGRNGYGAKLTNIFSTEF IETADG R
Sbjct: 124  VEIHQAEGVYVPEMIFGHLLTSSNYNDNEQKTTGGRNGYGAKLTNIFSTEFTIETADGHR 183

Query: 185  LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
             KKYKQVF+ NMGKKSEP ISKCK+ +NWT+V+FKPDLAKFNM HLEDDVVALMKKRVVD
Sbjct: 184  QKKYKQVFSENMGKKSEPEISKCKQSENWTRVTFKPDLAKFNMAHLEDDVVALMKKRVVD 243

Query: 245  LAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR-------FHERVNERWEICVTLSE 297
            +AG LGK+VKVELNG +VP KSF EYV++Y  S ++        +++VN+RWE+CV+LSE
Sbjct: 244  MAGTLGKTVKVELNGQKVPAKSFLEYVNLYIDSASKDGVKLPSIYQKVNDRWEVCVSLSE 303

Query: 298  GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNA 357
            GQFQQVSFVNGIATI+GGTHVDYVANQ+A HVMAVVNKKNK AN+K H VK +LWVFVNA
Sbjct: 304  GQFQQVSFVNGIATIRGGTHVDYVANQIATHVMAVVNKKNKQANMKLHTVKGYLWVFVNA 363

Query: 358  LIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK 417
            LIDNPAFDSQTKETLT RQ SFGSKC+LS++FLKKV A SG+V  LLSWA+FK SK+LKK
Sbjct: 364  LIDNPAFDSQTKETLTTRQGSFGSKCDLSDDFLKKV-ADSGVVSNLLSWADFKLSKELKK 422

Query: 418  NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPL 477
             DG+K  +V GI KLEDAN AGGR+S++CTLILTEGDSAKALAMAG  +VG D +GVFPL
Sbjct: 423  TDGSKRSNVLGIPKLEDANDAGGRDSDKCTLILTEGDSAKALAMAGRGIVGNDHYGVFPL 482

Query: 478  RGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLS 537
            RGKLLNVREA+  Q++ N+EI NIKKI+GL+ G EYN+ K LRYGHLMIMTDQ       
Sbjct: 483  RGKLLNVREATHKQMMENAEIQNIKKIIGLQHGKEYNSTKDLRYGHLMIMTDQ------- 535

Query: 538  FLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA 597
                                 DHDGSHIKGLLINFIHS WPSLLK+PSFLVEFITPI+KA
Sbjct: 536  ---------------------DHDGSHIKGLLINFIHSSWPSLLKVPSFLVEFITPIIKA 574

Query: 598  TNKNGK-VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKD 656
            TNK  K V+SFYSMPDYEAWKE LG NAS+WSIKYYKGLGTST+ EG+EYF+ I  H+KD
Sbjct: 575  TNKRSKSVISFYSMPDYEAWKERLGANASAWSIKYYKGLGTSTADEGREYFEKIAHHRKD 634

Query: 657  FVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMA 716
            FVW DD+DG+AIELAFSKK+I  RK WL  ++PG  LDQ+EK IKYSDF+NKELILFSMA
Sbjct: 635  FVWADDKDGDAIELAFSKKRIADRKDWLSNYQPGTCLDQREKRIKYSDFINKELILFSMA 694

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            DL+RSIPSMVDGLKPGQRKILF SFKRN +KE KVAQF GYVSEHSAYHHGEQSLASTIL
Sbjct: 695  DLERSIPSMVDGLKPGQRKILFSSFKRNLVKEIKVAQFIGYVSEHSAYHHGEQSLASTIL 754

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
            GMAQD+VGSNNI+LL+P GQFGTRN GGKDAASARYI+TRL  ITR +FPKDDD LL+YL
Sbjct: 755  GMAQDYVGSNNISLLEPRGQFGTRNSGGKDAASARYIYTRLPSITRIIFPKDDDVLLNYL 814

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
            NEDGQ IEPTWYMPIIP VLVNGSEGIGTGWS+Y PNYNPRDIVAN++RLLN + + PM 
Sbjct: 815  NEDGQSIEPTWYMPIIPMVLVNGSEGIGTGWSTYTPNYNPRDIVANLKRLLNDDPIVPMD 874

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ 956
            PWY+GF G+ EKT +K AGVTYT++GIIE  N+T L I ELP+RRWT DY+EFL S+  Q
Sbjct: 875  PWYKGFKGSFEKTTTKAAGVTYTISGIIEAANDTKLIISELPVRRWTLDYKEFLLSMCPQ 934

Query: 957  N-----------------------------DSFIRGFRQYSDDTTVDFEVFLSEESMMRT 987
            +                               F+   R   DD++V FE+ LSE++M   
Sbjct: 935  SVKEKEKEKDKNKNKSKDKDKDKDKNKEKEPPFLEDLRSQCDDSSVYFELTLSEKNMAIA 994

Query: 988  KQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLEN 1047
             QEGL KKFKLT T+ T+NMHLFDS G I+KYDTPE+IL+EFF +RLEFY +RK   L+N
Sbjct: 995  MQEGLEKKFKLTNTMGTTNMHLFDSNGKIRKYDTPEEILQEFFTLRLEFYGRRKITMLKN 1054

Query: 1048 LELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGAT 1107
            + +ELLKLEN+VRFI  V++G+I VNNRKR +L LEL++K F  FPK     E V  GA 
Sbjct: 1055 MRVELLKLENRVRFIRSVISGDIKVNNRKRAELFLELKEKNFDAFPKKKNKTEPVAVGAE 1114

Query: 1108 DETEESEENP-EVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
            +E EE+EE+P E  +GV   DY+YLLSMAIGTLTLEKV+ L+A +D L  EV+ L K  P
Sbjct: 1115 EEDEENEESPAEDTDGVLGGDYEYLLSMAIGTLTLEKVKQLIAQKDNLVNEVERLSKTDP 1174

Query: 1167 ESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDA-GPKIVAKRAPKNARKNDKK 1225
            +SLWVKDLDAL+ +LD LD     AEE+R   +     D    K   KR PK      +K
Sbjct: 1175 KSLWVKDLDALEKELDVLDAELKAAEEKRRLAREKSTKDGKASKAAPKRQPKKTAAKSQK 1234

Query: 1226 SNNARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLAS 1285
            +N A + +     D V  + KP  +       A     D EDE+ +LK RLA  N     
Sbjct: 1235 ANLAGSDDE----DYVAAIPKPAAQKKKPAKKASAQVKDAEDEILELKDRLAASN----- 1285

Query: 1286 TKLEPSPDQSGVMETEKVQVPAKKK----EPSKRTAAQKKVVTV-ETSDSED---EIIID 1337
              L+ SP+    METE  + P K K    EPS R AA+K + ++ + SD ED    I   
Sbjct: 1286 --LDSSPEHID-METETTEGPEKGKKGVDEPSNRGAAKKAMSSLADWSDEEDLTAPIHES 1342

Query: 1338 DDEAFEIAAPE-EGKKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKP 1396
            +DE F +   + E K  GRK A  ++ +KPA   +KR PA+ +     + Q+++ E+ KP
Sbjct: 1343 EDEGFAMEEVQVEKKTRGRKPA--AEKSKPA--VRKRAPAQSK----GMRQKVMEEIFKP 1394

Query: 1397 AES------SPEKKVRKMRASPFNKKSGSMLGRA-----GTIEEPSGSSPSTSEEVAEVL 1445
             +       SP KKVRKMRASPFNKKSGS+  R      GT +  +  S S++E VA   
Sbjct: 1395 TDDSTTSAPSPVKKVRKMRASPFNKKSGSVFQRVAGASTGTEDTDAPQSGSSAEPVA--- 1451

Query: 1446 PPKARPQRANR-RQARYVLSDS 1466
                 P+R  R R+A+ +  DS
Sbjct: 1452 -----PRRTARERKAKAIYIDS 1468


>gi|357457981|ref|XP_003599271.1| DNA topoisomerase [Medicago truncatula]
 gi|355488319|gb|AES69522.1| DNA topoisomerase [Medicago truncatula]
          Length = 1567

 Score = 1813 bits (4695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 966/1628 (59%), Positives = 1152/1628 (70%), Gaps = 209/1628 (12%)

Query: 3    VDKRLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYE 62
            ++KR PL  S  AN+     P+KTIEEMYQKK+QLEHILLRPDTY+GSIEKHTQ LW+YE
Sbjct: 1    MEKR-PLQPSTTANI-----PSKTIEEMYQKKTQLEHILLRPDTYVGSIEKHTQNLWVYE 54

Query: 63   EESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDG 122
             E   M++R+ISYVPGLYKIFDEILVNAADNKQRDP MD++KV ID E + +SV+N+GDG
Sbjct: 55   NEE--MVNRSISYVPGLYKIFDEILVNAADNKQRDPSMDSLKVTIDPEANTVSVYNNGDG 112

Query: 123  VPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADG 182
            VPVEIHQEE VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEF+IETADG
Sbjct: 113  VPVEIHQEEKVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFVIETADG 172

Query: 183  KRLKKYKQ-------------VFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH 229
            +RLKKYKQ             VFT+NMGKKS+P I+KCK  +NWTKV+FKPDL KF MT+
Sbjct: 173  RRLKKYKQASATVFSVCGFTKVFTDNMGKKSDPVITKCKANENWTKVTFKPDLEKFKMTY 232

Query: 230  LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY--------PKSVTRF 281
            LE+DVVALMKKRV+D+AGCLGK+VKVELNG  +  KSF +Y +++        P  + R 
Sbjct: 233  LEEDVVALMKKRVLDMAGCLGKTVKVELNGTVIRFKSFKDYAELFLKCAEKSKPSPLPRT 292

Query: 282  HERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN 341
            H +V +RWEICV+LS+GQFQQVSFVN IATIKGGTHVDY+ NQ+  ++M  VNKK K+AN
Sbjct: 293  HTKVGDRWEICVSLSDGQFQQVSFVNSIATIKGGTHVDYITNQITTYIMNKVNKKKKDAN 352

Query: 342  VKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVE 401
            VKAH VKNHLWVFVNALIDNPAFDSQTKETLT + +SFGSKC++ E  LK V  KSGIV+
Sbjct: 353  VKAHTVKNHLWVFVNALIDNPAFDSQTKETLTTKPASFGSKCDVPESMLKDV-EKSGIVD 411

Query: 402  TLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAM 461
            TLLSWA+FKQSKDLKK DGTKT+ +RGI KLEDAN AGG+NS++CTLILTEGDSAKALAM
Sbjct: 412  TLLSWADFKQSKDLKKTDGTKTQRLRGIVKLEDANDAGGKNSDKCTLILTEGDSAKALAM 471

Query: 462  AGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRY 521
            AGLSVVGRD +GVFPLRGKLLNVR+AS+ QV+ N EI NIKKILGL+Q  EY NVKSLRY
Sbjct: 472  AGLSVVGRDHYGVFPLRGKLLNVRDASNKQVMENEEIQNIKKILGLQQNKEYTNVKSLRY 531

Query: 522  GHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLL 581
            GHLMIM DQ                            DHDGSHIKGLLINFIHSFWPSLL
Sbjct: 532  GHLMIMADQ----------------------------DHDGSHIKGLLINFIHSFWPSLL 563

Query: 582  KIPSFLVEFITPIVK--------------------------------------------- 596
            K+PSF+VEF TPI++                                             
Sbjct: 564  KVPSFMVEFTTPIIRVSIINAVCCIFDNENTELYMPLSSRSLSVLILHLSLSLFFMMRYI 623

Query: 597  -----ATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 651
                 A++KNG  LSFYSMP+Y+AW+E LG  A++W+IKYYKGLGTST +EG+EYF+++ 
Sbjct: 624  YFAMQASHKNGTKLSFYSMPEYDAWRERLGNTANAWAIKYYKGLGTSTPQEGREYFKDLD 683

Query: 652  LHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELI 711
             H+KDF+WE++ DG AIELAFSKKK E RK W+  FEPG   D + K I Y DFV+KELI
Sbjct: 684  KHRKDFIWENELDGNAIELAFSKKKAEDRKNWMRSFEPGTCRDHEAKLISYKDFVDKELI 743

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            LFS ADLQRSIPSMVDGLKPGQRKILFCSFK+N  KE KV QF GYVSEHSAYHHGEQSL
Sbjct: 744  LFSRADLQRSIPSMVDGLKPGQRKILFCSFKKNLSKEVKVGQFIGYVSEHSAYHHGEQSL 803

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
            ASTI+GMAQDFVGSNNINLL PNGQFGTRN GGKD AS+RYI+T+L+ +TR LF  DDDK
Sbjct: 804  ASTIIGMAQDFVGSNNINLLTPNGQFGTRNLGGKDHASSRYIYTQLNTVTRSLFHADDDK 863

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            LL+YLNEDG+ IEP WY+PIIP VLVNGSEGIGTGWSS+IPNYNPR+I+ANVRRLLN E 
Sbjct: 864  LLEYLNEDGRSIEPNWYIPIIPLVLVNGSEGIGTGWSSFIPNYNPREIIANVRRLLNDEE 923

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLE 951
            M PM PWY+GF GTIEK+A KE G  Y V G +EE+++ T RI ELPIR+WTQDY+ FLE
Sbjct: 924  MVPMDPWYKGFRGTIEKSA-KEGG--YIVNGSVEEIDDITFRITELPIRKWTQDYKTFLE 980

Query: 952  SIIDQ----NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
               +      D  I  F+Q  DD  VD EV +  E +    QEGL KKFKLT+TISTSNM
Sbjct: 981  LTTEGAPNVKDPLIEDFKQNGDDAIVDIEVRMKAEKVAAIMQEGLFKKFKLTSTISTSNM 1040

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVN 1067
            HLFD++G IKK+DTPEQILEEF+ +RLE+YEKRKK  L NLE  LL L+NKVRFILGVV+
Sbjct: 1041 HLFDAEGKIKKFDTPEQILEEFYPLRLEYYEKRKKYILANLERLLLILDNKVRFILGVVS 1100

Query: 1068 GEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI- 1126
            GEI+V+NRKRT+LL+EL+QKGFTP PK  KS E  VAGA DE  E +E+ E     +S+ 
Sbjct: 1101 GEIIVSNRKRTELLIELKQKGFTPIPKKGKSAEPQVAGANDENSEDQEDSERETASKSVN 1160

Query: 1127 -------DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
                   DY+YLLS++IGTLTLE VQ LL ++     E + L     +SLW+KDLD L+ 
Sbjct: 1161 VEGATWGDYEYLLSLSIGTLTLESVQKLLDEKADKENEFEILMGTPSKSLWLKDLDELEK 1220

Query: 1180 QLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRA--PKNARKNDKKSN-NARATEAMG 1236
            +LDELD+ +A   ++R  +    N     ++  K A  P   RKN KK+N       +  
Sbjct: 1221 KLDELDRIEAEEGQKRSTMSNKKN-----RLATKPAKKPPQPRKNTKKANVEPENDNSSM 1275

Query: 1237 EMDNVTKVV------KPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEP 1290
            E++N  +VV      KPKGRAG KK    + D    DE+  L++RLA  N       LE 
Sbjct: 1276 EIENAVEVVKPVEVAKPKGRAGSKKNAQTEAD----DEILSLQERLAVYN-------LES 1324

Query: 1291 SPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVT-VETSDS------------------- 1330
            S ++S  ME E    PA KK+ +KR  A+KK  T V  SDS                   
Sbjct: 1325 SGEKSQAMEEEPPVPPAGKKQINKRGGAKKKSNTIVLESDSDNEVNDVEDDDDDFEVQEN 1384

Query: 1331 --------------EDEIIIDDDEAFEI---AAPEEGKKGGRKAAGNSKAAKPAAETKKR 1373
                            +    +D+ FE+   AAP   KKGGRKA  N+K    AA   K 
Sbjct: 1385 AAPAKKGGRKPAAQNAKKAAAEDDEFEVQEKAAP--AKKGGRKAVQNAKPPAKAAAAPK- 1441

Query: 1374 GPAKKQQPEASLGQRLLTEMLKPAES---SPEKKVRKMRASPFNKKSGSMLGRAGTI--- 1427
               +    +++LGQ+LLT+ML+PAES   SPEKKVRKMR SPFNKKSGS+LG+   +   
Sbjct: 1442 --KRNVGSKSTLGQKLLTDMLQPAESIGTSPEKKVRKMRESPFNKKSGSILGKTANMDIS 1499

Query: 1428 ------EEPSGSSPSTSEEVAEVL--PPKARPQRANRRQARYVLSDSESEKATDD----- 1474
                  E  + +SP+  +EV E+   P +ARPQRANR Q +YV+S+SES+  +DD     
Sbjct: 1500 PIADLSEGSTSNSPTAEDEVVEIAPQPARARPQRANRTQMKYVVSESESDNESDDEDAEL 1559

Query: 1475 SEFDEDED 1482
            S+F+ED+D
Sbjct: 1560 SDFEEDDD 1567


>gi|186510360|ref|NP_001118686.1| DNA topoisomerase 2 [Arabidopsis thaliana]
 gi|332643306|gb|AEE76827.1| DNA topoisomerase 2 [Arabidopsis thaliana]
          Length = 1438

 Score = 1786 bits (4625), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 905/1305 (69%), Positives = 1048/1305 (80%), Gaps = 62/1305 (4%)

Query: 6    RLPLTTSNNANVVGPTAPN------KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALW 59
            +LPL  SN ANV    A +      KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQ LW
Sbjct: 4    KLPLQNSNAANVAKAPAKSRAAAGGKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQTLW 63

Query: 60   IYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNS 119
            +YE++   M+ R ++YVPGLYKIFDEILVNAADNKQRD KMD+V+VVID E +LISV NS
Sbjct: 64   VYEKDE--MVQRPVTYVPGLYKIFDEILVNAADNKQRDAKMDSVQVVIDVEQNLISVCNS 121

Query: 120  GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
            G GVPVEIHQEEG+YVPE+IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET
Sbjct: 122  GAGVPVEIHQEEGIYVPEMIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 181

Query: 180  ADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK 239
            ADGKRLKKYKQVF NNMGKKSEP I+KC + +NWTKV+FKPDL KFNMT LEDDVVALM 
Sbjct: 182  ADGKRLKKYKQVFENNMGKKSEPVITKCNKSENWTKVTFKPDLKKFNMTELEDDVVALMS 241

Query: 240  KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS---------VTRFHERVNERWE 290
            KRV D+AGCLGKSVKVELNG ++PVKSF +YVD+Y  +         + R  E+VN+RWE
Sbjct: 242  KRVFDIAGCLGKSVKVELNGKQIPVKSFTDYVDLYLSAANKSRTEDPLPRLTEKVNDRWE 301

Query: 291  ICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNH 350
            +CV+LSEGQFQQVSFVN IATIKGGTHVDYV +Q+ NH++A VNKKNKNANVKAHNVKNH
Sbjct: 302  VCVSLSEGQFQQVSFVNSIATIKGGTHVDYVTSQITNHIVAAVNKKNKNANVKAHNVKNH 361

Query: 351  LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFK 410
            LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE+FLKKV  KSG+VE LLSWA+FK
Sbjct: 362  LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKV-GKSGVVENLLSWADFK 420

Query: 411  QSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD 470
            Q+KDLKK+DG KT  V  + KL+DA  AGG+NS  CTLILTEGDSAK+LA+AG SV+G +
Sbjct: 421  QNKDLKKSDGAKTGRVL-VEKLDDAAEAGGKNSRLCTLILTEGDSAKSLALAGRSVLGNN 479

Query: 471  RFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQ 530
              GVFPLRGKLLNVREAS+ Q+ NN EI N+KKILGLKQ ++Y NV SLRYG +MIMTDQ
Sbjct: 480  YCGVFPLRGKLLNVREASTTQITNNKEIENLKKILGLKQNMKYENVNSLRYGQMMIMTDQ 539

Query: 531  VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
                                        DHDGSHIKGLLINFIHSFWPSLL++PSFLVEF
Sbjct: 540  ----------------------------DHDGSHIKGLLINFIHSFWPSLLQVPSFLVEF 571

Query: 591  ITPIVKATNKNGK-VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
            ITPIVKAT K  K VLSFYSMP+YE WKESL GNA+ W IKYYKGLGTST++EGKEYF N
Sbjct: 572  ITPIVKATRKGTKKVLSFYSMPEYEEWKESLKGNATGWDIKYYKGLGTSTAEEGKEYFSN 631

Query: 650  ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKE 709
            + LHKKDFVWED+QDGEAIELAFSKKKIEARK WL  + PGNHLDQ++  + YSDFVNKE
Sbjct: 632  LGLHKKDFVWEDEQDGEAIELAFSKKKIEARKNWLSSYVPGNHLDQRQPKVTYSDFVNKE 691

Query: 710  LILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQ 769
            LILFSMADLQRSIPSMVDGLKPGQRKILF +FK+   KE KVAQ  GYVS  SAYHHGEQ
Sbjct: 692  LILFSMADLQRSIPSMVDGLKPGQRKILFVAFKKIARKEMKVAQLVGYVSLLSAYHHGEQ 751

Query: 770  SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
            SLAS I+GMAQD+VGSNNINLL PNGQFGTR  GGKD+ASARYIFT+LSP+TR LFPKDD
Sbjct: 752  SLASAIIGMAQDYVGSNNINLLLPNGQFGTRTSGGKDSASARYIFTKLSPVTRILFPKDD 811

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
            D LLDYLNEDGQ+IEPTWYMPIIPTVLVNG+EGIGTGWS++IPNYNPR+IVANVRRLLNG
Sbjct: 812  DLLLDYLNEDGQRIEPTWYMPIIPTVLVNGAEGIGTGWSTFIPNYNPREIVANVRRLLNG 871

Query: 890  EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREF 949
            E M PM PWYRGF GTIEKTASKE G TYT+TG+ EEV+ETT+RI ELPIRRW  DY+ F
Sbjct: 872  ESMVPMDPWYRGFKGTIEKTASKEGGCTYTITGLYEEVDETTIRITELPIRRWNDDYKNF 931

Query: 950  LESI-IDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMH 1008
            L+S+  D    F +  + Y+D+ +VDF++ LSEE+M+  +QEG LKKFKLTTTI+TSNMH
Sbjct: 932  LQSLKTDNGAPFFQDVKAYNDEKSVDFDLILSEENMLAARQEGFLKKFKLTTTIATSNMH 991

Query: 1009 LFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNG 1068
            LFD KGVIKKY TPEQILEEFF +R E+YEKRK+  ++N+E+ELLKLENK RFIL V++G
Sbjct: 992  LFDKKGVIKKYVTPEQILEEFFDLRFEYYEKRKETVVKNMEIELLKLENKARFILAVLSG 1051

Query: 1069 EIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDE--TEESEE---NPEVVNG- 1122
            EI+VN RK+ D++ +LRQKGFTPFP+ ++S+EA +AGA D+   EE EE   +PE  +  
Sbjct: 1052 EIIVNKRKKADIVEDLRQKGFTPFPRKAESVEAAIAGAVDDDAAEEPEEILVDPESSSSY 1111

Query: 1123 VQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
            +   +YDYLL+MAI +LT+EKV+ LLADRDK+   V D++K TP+SLW+ DL++LD +L+
Sbjct: 1112 IPGSEYDYLLAMAIASLTIEKVEELLADRDKMIIAVADMKKTTPKSLWLSDLESLDKELE 1171

Query: 1183 ELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATE-------AM 1235
            +LD  DA+ ++     +      +G  +  KR         K +  A  +E       AM
Sbjct: 1172 KLDLKDAQVQQAIEAAQKKIRAKSGAAVKVKRQAPKKPAPKKTTKKASESETTEASYSAM 1231

Query: 1236 GEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLN 1280
               +NV +VVKPKGR G KK       + EEDE+ DL QRLA+ N
Sbjct: 1232 DTDNNVAEVVKPKGRQGAKKKAPAAAKEVEEDEMLDLAQRLAQYN 1276


>gi|242062820|ref|XP_002452699.1| hypothetical protein SORBIDRAFT_04g030880 [Sorghum bicolor]
 gi|241932530|gb|EES05675.1| hypothetical protein SORBIDRAFT_04g030880 [Sorghum bicolor]
          Length = 1452

 Score = 1778 bits (4605), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 939/1495 (62%), Positives = 1124/1495 (75%), Gaps = 99/1495 (6%)

Query: 8    PLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT 67
            PL +S+  N        KTIEEMYQKK+QLEHILLRPDTYIGS+EKHTQ LW++E+ +  
Sbjct: 4    PLHSSSGHNAAAGGG-GKTIEEMYQKKTQLEHILLRPDTYIGSVEKHTQPLWVFEDGA-- 60

Query: 68   MIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEI 127
            M++R+++YVPGLYKIFDEILVNAADNKQRDPKMDA++V ID +   ISV+N+GDG+PVEI
Sbjct: 61   MVNRSVTYVPGLYKIFDEILVNAADNKQRDPKMDALRVQIDVDGCCISVYNNGDGIPVEI 120

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
            HQEE VYVPE+IFGHLLTSSNY+DN KKTTGGRNGYGAKLTNIFSTEF+IETADG+R KK
Sbjct: 121  HQEERVYVPEMIFGHLLTSSNYNDNEKKTTGGRNGYGAKLTNIFSTEFVIETADGRRQKK 180

Query: 188  YKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
            YKQVF+ NMGKKSEP I+KCK+G+NWT+V+FKPDLAKFNM HLE+DVVALM+KRVVD+AG
Sbjct: 181  YKQVFSENMGKKSEPQITKCKQGENWTRVTFKPDLAKFNMAHLEEDVVALMRKRVVDMAG 240

Query: 248  CLGKSVKVELNGHRVPVKSFAEYVDMY--------PKSVTRFHERVNERWEICVTLSEGQ 299
             LGK+VKVEL+G RVP+KSF++YV++Y        P +    +E  N+RWE+CV  SEGQ
Sbjct: 241  TLGKTVKVELDGQRVPIKSFSDYVNLYMKSANCDRPDNFKTIYEN-NDRWEVCVCQSEGQ 299

Query: 300  FQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALI 359
            FQQVSFVN IATI+GGTHVDY+ NQ+ANHVM VVNKKNKNAN+K HNVK+HLWVFVNALI
Sbjct: 300  FQQVSFVNRIATIRGGTHVDYITNQIANHVMTVVNKKNKNANMKLHNVKSHLWVFVNALI 359

Query: 360  DNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKND 419
            DNPAFDSQTKETLT RQ SFGSK ELS +FLKKV  KS I+E +LSWA+FK SK+LKK D
Sbjct: 360  DNPAFDSQTKETLTTRQGSFGSKFELSIDFLKKV-EKSSIIENVLSWADFKLSKELKKTD 418

Query: 420  GTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRG 479
            G+K   + GI KLEDAN AGG++SE+CTLILTEGDSAKALAM+G++VVGRD +GVFPLRG
Sbjct: 419  GSKKSRISGIPKLEDANEAGGKDSEKCTLILTEGDSAKALAMSGIAVVGRDYYGVFPLRG 478

Query: 480  KLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFL 539
            KLLNVREA+  Q++ N+EI NIK+ILGL+ G +Y + K LRYGHLMIMTDQ         
Sbjct: 479  KLLNVREANHKQIMENAEIQNIKQILGLQHGKQYASAKGLRYGHLMIMTDQ--------- 529

Query: 540  LWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATN 599
                               DHDGSHIKGLLINFIHSFWPSLLK+ SFLVEF+TPI+KAT 
Sbjct: 530  -------------------DHDGSHIKGLLINFIHSFWPSLLKVESFLVEFVTPIIKAT- 569

Query: 600  KNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
            +    +SFY+MP+YE W+ +LG +ASSW+IKYYKGLGTST+KEG+EYF++IT HKKDFVW
Sbjct: 570  RGKTTISFYTMPEYEEWRTNLGASASSWTIKYYKGLGTSTAKEGREYFKDITDHKKDFVW 629

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
            EDDQDG  IELAFSKK+I  RK WL  F+PG ++DQ+EK ++YSDF+NKELILFSMADLQ
Sbjct: 630  EDDQDGNHIELAFSKKRIADRKLWLTNFQPGTYIDQQEKRVRYSDFINKELILFSMADLQ 689

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPSMVDGLKPGQRKILFCSFKRNF+KEAKVAQFSGYVSEHSAYHHGEQSLASTI+GMA
Sbjct: 690  RSIPSMVDGLKPGQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMA 749

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINL+ P GQFGTR QGGKDAAS RYIFT+LS ITR +FPKDDD LL+YLNED
Sbjct: 750  QNFVGSNNINLMFPGGQFGTRAQGGKDAASPRYIFTKLSHITRSIFPKDDDILLNYLNED 809

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
            GQ IEPTWYMPI+P VLVNGSEGIGTGWS++IPNYNPRDIVAN+RRLLN E   PMHPWY
Sbjct: 810  GQSIEPTWYMPILPMVLVNGSEGIGTGWSTFIPNYNPRDIVANLRRLLNEESTVPMHPWY 869

Query: 900  RGFGGTIEKTA-SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI-IDQN 957
            RGF G+IEKT  +K  G TYTVTGIIE V+ + LRI ELPIRRWT DY+EFLES+  D+N
Sbjct: 870  RGFKGSIEKTVNTKVVGSTYTVTGIIEVVDNSRLRITELPIRRWTGDYKEFLESLGPDKN 929

Query: 958  DS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
                 FI       D+  +  E+ LSE +M   K+EGL+KKFKLTTTI TSNMHLFDS G
Sbjct: 930  KDKVPFIEDVTAQGDNEDIYIEIQLSEGNMNIAKEEGLVKKFKLTTTIGTSNMHLFDSNG 989

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             I+KYDTPEQILEEFF +RLEFY KRK+  L+N++LEL KLENKVRFI  VV+ EI+VNN
Sbjct: 990  KIRKYDTPEQILEEFFQLRLEFYVKRKEALLKNIKLELKKLENKVRFIRCVVDNEIIVNN 1049

Query: 1075 RKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSM 1134
            RKR DL LELRQK F PFPK  K  E   AGA +E  E           +  DY+YLL+M
Sbjct: 1050 RKRADLFLELRQKNFDPFPKKKKRAEPAAAGALEEENEEN---PEAEAAEPSDYEYLLAM 1106

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
             IGTLTLEK+Q L+A++ KL ++V++L+  +P+SLW+KDLDA + +LD LD+ D   EE+
Sbjct: 1107 PIGTLTLEKIQELIAEKQKLVDDVEELKNTSPKSLWLKDLDAFEKELDLLDQMDLSEEEQ 1166

Query: 1195 RMK-IKGNGNGDAGPKIVAKRAPKNARKNDKKSNNA--RATEAMGEMDNVTKVVKPKGRA 1251
            R K IK       G K  +K APK  ++  K  + A  +  ++  E D+  + V PK   
Sbjct: 1167 REKRIKD------GKKGRSKAAPKKQQRGKKAGSKAAVKKEKSDTEDDDAAEPVVPKRGG 1220

Query: 1252 GLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKK-- 1309
              KKAP +   D+EE ++P LK RLA  N        + SPD S  METE  +   +K  
Sbjct: 1221 QQKKAPKKAPVDEEEFDIPALKDRLADFNIN------DSSPDYSA-METEITEEQNEKLA 1273

Query: 1310 -KEPSKRTAAQKKV-VTVETSDSEDEIIIDDDEAFEIAAPEEGKKGGRKAAGNSKAAKPA 1367
             K PSKR   +K V  ++    S+DE   DDD   E  +  + +K GR     +     A
Sbjct: 1274 TKGPSKRGGGKKAVSSSLVMIQSDDE---DDDFTLEEVSEVQAQKKGRGKKPAAAVKPKA 1330

Query: 1368 AETKKRGPAKKQQPEASLGQRLLTEMLKPAE---SSPEKKVRKMRASPFNKKSGSMLGRA 1424
               +KR PA     +    Q+ + EML+  E   +SPEKKVRKMR SPFNKKSGS+L R 
Sbjct: 1331 PAPRKRAPA-----QGKATQKKIDEMLQGIEDNNTSPEKKVRKMRPSPFNKKSGSILQR- 1384

Query: 1425 GTIEEPSGSSPSTSEEVAEVLPPK---------ARPQRANRRQARYV-LSDSESE 1469
                   GS+ ++SE  AE  PP          A+P+R  R   + V ++DS+ E
Sbjct: 1385 -------GSTAASSETTAEASPPSGSSAEPVGAAQPRRTARATKKPVYVTDSDPE 1432


>gi|413938393|gb|AFW72944.1| DNA topoisomerase 2 [Zea mays]
          Length = 1412

 Score = 1774 bits (4596), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 929/1493 (62%), Positives = 1104/1493 (73%), Gaps = 134/1493 (8%)

Query: 8    PLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT 67
            PL +S+  N        KTIEEMYQKK+QLEHILLRPDTYIGS+EKHTQALWIYE+ +  
Sbjct: 4    PLHSSSGHNAAAGGG-AKTIEEMYQKKTQLEHILLRPDTYIGSVEKHTQALWIYEDGA-- 60

Query: 68   MIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEI 127
            M++R+++YVPGLYKIFDEILVNAADNKQRDPKMDA++V ID +   ISV+N+GDG+PVE+
Sbjct: 61   MVNRSVTYVPGLYKIFDEILVNAADNKQRDPKMDALRVEIDVDSCCISVYNNGDGIPVEV 120

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
            HQEEGVYVPE+I GHLLTSSNY+DN KKTTGGRNGYGAKLTNIFSTEF+IETADG+R KK
Sbjct: 121  HQEEGVYVPEMILGHLLTSSNYNDNEKKTTGGRNGYGAKLTNIFSTEFVIETADGRRQKK 180

Query: 188  YKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
            YKQVF  NMGKKSEP I+KCK+G+NWT+V+FKPDLAKFNMTHLEDDVVALM+KRVVD+AG
Sbjct: 181  YKQVFYENMGKKSEPQITKCKQGENWTRVTFKPDLAKFNMTHLEDDVVALMRKRVVDMAG 240

Query: 248  CLGKSVKVELNGHRVPVKSFAEYVDMYPKSVT--------RFHERVNERWEICVTLSEGQ 299
             LGK+VKVEL+G RVP+KSF +YVD+Y KS          R +E+VN+RWE+CV+ SEGQ
Sbjct: 241  TLGKTVKVELDGQRVPIKSFCDYVDLYMKSANCDRPDNFKRIYEQVNDRWEVCVSQSEGQ 300

Query: 300  FQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALI 359
            FQQVSFVN IATI+GG+HVDYV NQ+ANHV+A+VNKKNKNAN+K HNVK+HLWVFVNALI
Sbjct: 301  FQQVSFVNRIATIRGGSHVDYVTNQIANHVVAIVNKKNKNANMKLHNVKSHLWVFVNALI 360

Query: 360  DNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKND 419
            DNPAFDSQTKETLT RQ SFGSKCELS +FLKKV  KSG++E +LSWA+FK SK+LKK D
Sbjct: 361  DNPAFDSQTKETLTTRQGSFGSKCELSSDFLKKV-EKSGVIENVLSWADFKLSKELKKTD 419

Query: 420  GTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRG 479
            G+K   + GI KLEDAN AGG++S++CTLILTEGDSAKALAM+G++VVGRD +GVFPLRG
Sbjct: 420  GSKKSRISGIPKLEDANEAGGKDSDKCTLILTEGDSAKALAMSGIAVVGRDYYGVFPLRG 479

Query: 480  KLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFL 539
            KLLNVREA+  Q+++N+EI +IK+ILGL+ G +Y + K LRYGHLMIMTDQ         
Sbjct: 480  KLLNVREANHKQIMDNAEIQHIKQILGLQHGKQYESTKGLRYGHLMIMTDQ--------- 530

Query: 540  LWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATN 599
                               DHDGSHIKGLLINFIHSFWPSLLK+PSFLVEFITPI+KAT 
Sbjct: 531  -------------------DHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFITPIIKAT- 570

Query: 600  KNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
            +     SFY+MP+YE W+++LG +ASSW+IKYYKGLGTST+KEG++YF++I  HKKDFVW
Sbjct: 571  RGQTTKSFYTMPEYEEWRKNLGASASSWTIKYYKGLGTSTAKEGRKYFEDIIDHKKDFVW 630

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
             DDQDG  IELAFSKK+I  RK+WL  F+PG ++DQ+EK +KYSDF+NKELILFSMADLQ
Sbjct: 631  VDDQDGNHIELAFSKKRIADRKQWLTNFQPGTYIDQREKQVKYSDFINKELILFSMADLQ 690

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPSMVDGLKPGQRKILFCSFKRNF+KEAKVAQFSGYVSEHSAYHHGEQSLASTI+GMA
Sbjct: 691  RSIPSMVDGLKPGQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLASTIIGMA 750

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINL+ PNGQFGTR QGGKDAAS RYIFT+LS ITR +FPKDDD LL+YLNED
Sbjct: 751  QNFVGSNNINLMSPNGQFGTRAQGGKDAASPRYIFTKLSNITRSIFPKDDDILLNYLNED 810

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
            GQ IEPTWYMPI+P VLVNGSEGIGTGWS+YIPNYNPRDIVANVRRLLN E   PMHPWY
Sbjct: 811  GQSIEPTWYMPILPMVLVNGSEGIGTGWSTYIPNYNPRDIVANVRRLLNEESTVPMHPWY 870

Query: 900  RGFGGTIEKTA-SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND 958
            RGF G+IEKT  +K AG TYTVTGIIE V+ TTLRI ELPIRRWTQDY++FLES+     
Sbjct: 871  RGFKGSIEKTVNTKVAGSTYTVTGIIEVVDNTTLRITELPIRRWTQDYKDFLESLAPDPK 930

Query: 959  -----SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
                 +FI       D+  V  ++ LSE ++   K+EGL+KKFKLTTTI T+NMHLFDS 
Sbjct: 931  NKDKVTFIEDVTSQGDNEDVYIQLKLSEANVNVAKEEGLVKKFKLTTTIGTTNMHLFDSD 990

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G I+KYDTPEQILEEFF +RLEFY KRK+  L+N++L+L KLENKVRFI  VV+ EI+VN
Sbjct: 991  GKIRKYDTPEQILEEFFQLRLEFYCKRKEALLKNIKLDLKKLENKVRFIRCVVDNEIIVN 1050

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLS 1133
            NRKR DL LELR K F PFPK  K  E    GA +E E  E   E   GV   DY+YLLS
Sbjct: 1051 NRKRADLFLELRHKNFDPFPKKKKKAEPTAVGAIEEEENEESP-ETAAGVDPSDYEYLLS 1109

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEE 1193
            M+IGTLTLEK+Q L A++ KL ++V +L   +P+SLW+KDLDA + +LD LD+ D   E 
Sbjct: 1110 MSIGTLTLEKIQELNAEKQKLVDDVVELMNTSPKSLWLKDLDAFEKELDVLDQMDLAEEV 1169

Query: 1194 ERMK-IKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAG 1252
            +R K IK    G +      +       K +  +            DN  + V  K  A 
Sbjct: 1170 QREKRIKEGKKGGSKAAPKKQPKKAAPIKLESSTE-----------DNAAEPVVAKRGAQ 1218

Query: 1253 LKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEP 1312
             KKAP +   D+EE ++P LK RLA  N        + SP     METE  + PA+    
Sbjct: 1219 QKKAPKKAPVDEEEVDMPSLKDRLAAFNIN------DSSPPDHSAMETETTEQPAQ---- 1268

Query: 1313 SKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIAAPEEGKKGGRKAAGNSKAAKPAAETKK 1372
                                                  KKG  K    +     A   +K
Sbjct: 1269 --------------------------------------KKGRGKKPAAAAVKPKAPAARK 1290

Query: 1373 RGPAKKQQPEASLGQRLLTEMLKPAES------SPEKKVRKMRASPFNKKSGSMLGRAGT 1426
            R P   Q  +A+  Q+ + EMLK  E       SPEKKVRKMR SPFNKKSGS+L R  T
Sbjct: 1291 RAPT--QGGKAT--QKKIDEMLKVTEDNTSSALSPEKKVRKMRPSPFNKKSGSILQRGST 1346

Query: 1427 IEEPSGSSPSTSEEVAEVLPPK---------ARPQRANRRQARYV-LSDSESE 1469
                  ++ ++SE +AE  PP          A+P+R  R   ++V +S+S+ E
Sbjct: 1347 ------AASASSETIAEASPPSGSSEEPVAAAKPRRTARATKKHVYISESDPE 1393


>gi|6094496|sp|O24308.1|TOP2_PEA RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
            II; AltName: Full=PsTopII
 gi|2330651|emb|CAA74891.1| topoisomerase II [Pisum sativum]
          Length = 1462

 Score = 1759 bits (4555), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 943/1543 (61%), Positives = 1123/1543 (72%), Gaps = 144/1543 (9%)

Query: 3    VDKRLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYE 62
            ++KR PL TSN AN+     P+KTIEEMYQKK+QLEHILLRPDTY+GSIEKHTQ LW+YE
Sbjct: 1    MEKR-PLQTSNAANI-----PSKTIEEMYQKKTQLEHILLRPDTYVGSIEKHTQNLWVYE 54

Query: 63   EESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDG 122
             +   M+HR +SYVPGLYKIFDEILVNAADNKQRDP MD++KV ID E + +SV+N+GDG
Sbjct: 55   NDE--MVHRAVSYVPGLYKIFDEILVNAADNKQRDPSMDSLKVTIDPEANTVSVYNNGDG 112

Query: 123  VPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADG 182
            VPVEIHQEE VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADG
Sbjct: 113  VPVEIHQEEKVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADG 172

Query: 183  KRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRV 242
            +RLKKYKQVF+NNMG K EP I+KCK  +NWTKV+FKPDL KF M +LE+DVVALMKKRV
Sbjct: 173  RRLKKYKQVFSNNMGTKCEPVITKCKASENWTKVTFKPDLEKFKMAYLEEDVVALMKKRV 232

Query: 243  VDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY--------PKSVTRFHERVNERWEICVT 294
            +D+AGC GK+VKVELNG  +  KSF +Y D++        P  + R H +V +RWEIC++
Sbjct: 233  LDMAGCFGKTVKVELNGTLIRFKSFRDYADLFLKCAEKSKPMPLPRIHAKVGDRWEICIS 292

Query: 295  LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVF 354
            LS+GQFQQVSFVN IATIKGGTHVDY+ NQ+  ++M  VNKK K+ANVKAH VKNHLWVF
Sbjct: 293  LSDGQFQQVSFVNSIATIKGGTHVDYITNQITTYIMNKVNKKKKDANVKAHTVKNHLWVF 352

Query: 355  VNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKD 414
            VN+LIDNPAFDSQTKETLT RQ+SFGSKC++ E  LK V  KSGIV+TLLSWA+FKQSKD
Sbjct: 353  VNSLIDNPAFDSQTKETLTTRQASFGSKCDVPESMLKDV-EKSGIVDTLLSWADFKQSKD 411

Query: 415  LKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGV 474
            LKK DGTKT+ +RG  K EDAN AGGRNSE+CTLILTEGDSAKALAMAGLSVVGRD +GV
Sbjct: 412  LKKTDGTKTQRLRGC-KAEDANEAGGRNSEKCTLILTEGDSAKALAMAGLSVVGRDHYGV 470

Query: 475  FPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLA 534
            FPLRGKLLNVREASS Q+++N EI NIKKILGL+Q  EY NVKSLRYGHLMIM DQ    
Sbjct: 471  FPLRGKLLNVREASSKQIMDNEEIQNIKKILGLQQNKEYTNVKSLRYGHLMIMADQ---- 526

Query: 535  PLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPI 594
                                    DHDGSHIKGLLINFIHSFWPSLLK+PSFLVEF TP+
Sbjct: 527  ------------------------DHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFTTPV 562

Query: 595  VKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHK 654
            ++A++ N  + SFYSMP+YEAWKE LG +A+SW IKYYKGLGTST +EG+EYF ++  H+
Sbjct: 563  IRASHPNKTITSFYSMPEYEAWKERLGNSATSWKIKYYKGLGTSTPQEGREYFSDLGRHR 622

Query: 655  KDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFS 714
            KDF+W+D+ DG AIELAFSKKK E RK W+  FEPG   D + K I Y DFVNKELILFS
Sbjct: 623  KDFIWDDELDGNAIELAFSKKKAEGRKIWMRNFEPGTCRDHEAKLINYKDFVNKELILFS 682

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
             ADL                   F SFK+   KE KVAQF GYVSEHSAYHHGEQSLAST
Sbjct: 683  RADL-------------------FGSFKKKLYKEIKVAQFIGYVSEHSAYHHGEQSLAST 723

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+GMAQDFVGSNNINLL+PNGQFGT N GGKD ASARYI+T LSP+TR LF + DDKLL+
Sbjct: 724  IIGMAQDFVGSNNINLLKPNGQFGTCNLGGKDHASARYIYTELSPVTRCLFHEHDDKLLE 783

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            YLNEDG+ IEP WYMPIIP VLVNGSEGIGTGWSSYIPNYNPR+I+ANVRRLLNGE + P
Sbjct: 784  YLNEDGKSIEPNWYMPIIPLVLVNGSEGIGTGWSSYIPNYNPREIIANVRRLLNGEELVP 843

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII 954
            M PWY+GF GTIEK+A KE G  Y V G + E++E T RI ELPIR+WTQDY++FLESI 
Sbjct: 844  MDPWYKGFRGTIEKSA-KEGG--YIVNGTVTEIDEQTFRITELPIRKWTQDYKQFLESIT 900

Query: 955  DQ----NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
            D      D  I  FRQ  DD  VD E+ +  E +    QEGL KKFKLT+TISTSNMHLF
Sbjct: 901  DGAPNVKDPLIEDFRQNGDDAIVDIEIKMKPEKIATILQEGLFKKFKLTSTISTSNMHLF 960

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D++G  KK+DTPEQILEEFF +RL++YEK K+  L NL   LL L+NKVRFILGVVNGEI
Sbjct: 961  DAEGN-KKFDTPEQILEEFFPLRLDYYEKSKEYILGNLNRLLLILDNKVRFILGVVNGEI 1019

Query: 1071 VVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI---- 1126
            +V+NRK+ +LL+EL++KGFTP P+  KS +  VAGA D+  E +E+ E     QS+    
Sbjct: 1020 IVSNRKKAELLIELKEKGFTPMPRKGKSTKPQVAGANDDDSEEQEDAEPETASQSVSVEG 1079

Query: 1127 ----DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP-ESLWVKDLDALDMQL 1181
                DYD LLS+ IGTLTLE VQ LL D     E+  ++   TP  SLW+KDLD  + +L
Sbjct: 1080 ATWGDYDDLLSLPIGTLTLESVQKLL-DEKTEKEKEYEILSGTPTTSLWLKDLDEFEKKL 1138

Query: 1182 DELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKS--------NNARATE 1233
            DELD   A  + +R   +G+   +      AK+ P+  RKN KK+        N++   E
Sbjct: 1139 DELDLKYAEDDRKRAS-QGSKKANGFASKPAKKPPQ-PRKNTKKAKSVEPENDNSSMEIE 1196

Query: 1234 AMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPD 1293
               E     +V KPKGRA    AP + +  + ED++  L++RLA  N       +E S +
Sbjct: 1197 NAVEAAKPAEVAKPKGRA----APKKNIQKEPEDDIQSLQERLAAYN-------IESSGE 1245

Query: 1294 QSGVMETEKVQVPAK-KKEPSKRTAAQKKVVT-VETSDSEDEIIIDDDEAF------EIA 1345
            +S  ME+E+VQ  A  KK+ +KR  A+KK  T V  SDS++E+   DD+        + A
Sbjct: 1246 KSQAMESEEVQQKAAGKKQNNKRGGAKKKSSTIVLESDSDNEVNDVDDDDDDFEEVQQKA 1305

Query: 1346 APEEGKKGGRKAAGNS-------KAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKPAE 1398
            AP   KKGGRK A  +         AK  A  KKR    KQ    S GQ+LLT+ML+PAE
Sbjct: 1306 APV--KKGGRKPAAQNAKKAPAKAPAKAPAAPKKRSVGTKQ----SAGQKLLTDMLQPAE 1359

Query: 1399 ---SSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPS----------GSSPSTSEEVAEVL 1445
               +SPEKKVRKMR SPFNKKSGS+LGRA   ++ S           ++P + +EV E+ 
Sbjct: 1360 GTGTSPEKKVRKMRESPFNKKSGSILGRAAAAKDISPIADCSAGSASNTPLSEDEVVEIA 1419

Query: 1446 --PPKARPQRANRRQARYVL----SDSESEKATDDSEFDEDED 1482
              P +ARPQRANR Q +Y L    S+ +S++  + S+F+ED+D
Sbjct: 1420 PQPARARPQRANRTQMKYALSESESEEDSDEDAELSDFEEDDD 1462


>gi|168033077|ref|XP_001769043.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679677|gb|EDQ66121.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1172

 Score = 1743 bits (4515), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 835/1189 (70%), Positives = 981/1189 (82%), Gaps = 45/1189 (3%)

Query: 6    RLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES 65
            +LPL +S+  N+      +K+IEE YQKK+QLEHILLRPDTY+GSIEKHTQ+LW+YE+E 
Sbjct: 6    KLPLQSSSGFNIDREPQNDKSIEETYQKKTQLEHILLRPDTYVGSIEKHTQSLWVYEDEK 65

Query: 66   KTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPV 125
              M++R++++VPGLYKIFDEILVNAADNKQRDP MD VKV ID E++ ISV N+GDGVPV
Sbjct: 66   --MVNRSVTFVPGLYKIFDEILVNAADNKQRDPSMDTVKVEIDVENNFISVFNNGDGVPV 123

Query: 126  EIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRL 185
            EIH+EEGVYVPE+IFGHLLTSSNY+D+ KKTTGGRNGYGAKL NIFSTEF IETADGKRL
Sbjct: 124  EIHKEEGVYVPEMIFGHLLTSSNYNDSEKKTTGGRNGYGAKLANIFSTEFTIETADGKRL 183

Query: 186  KKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDL 245
            ++YKQVFTNNM  KSEP I+ CK  +NWTKVSFKPDL+KFNMTHLE DVVALM KRV+D+
Sbjct: 184  RRYKQVFTNNMSLKSEPKITTCKANENWTKVSFKPDLSKFNMTHLESDVVALMSKRVMDV 243

Query: 246  AGCLGKSVKVELNGHRVPVKSFAEYVDMY--------PKSVTRFHERVNERWEICVTLSE 297
            AGCLGK  KVELNG R+P+KSF +YV +Y         + + R +ERV++RWE+CV+LS+
Sbjct: 244  AGCLGKGCKVELNGKRLPIKSFQDYVGLYLSVANAGREEPLPRIYERVSDRWEVCVSLSD 303

Query: 298  GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNA 357
            GQF QVSF N IATI+GGTHV YV +Q+  HV+A+VNKKNK A VK   +KNH+WVFVNA
Sbjct: 304  GQFNQVSFCNSIATIRGGTHVAYVTDQIVTHVLALVNKKNKTAGVKPFQIKNHMWVFVNA 363

Query: 358  LIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK 417
            LIDNP FDSQTKETLT R SSFGSKCELS EFLKKV AK G+VE +L+WA+FKQSK+LKK
Sbjct: 364  LIDNPTFDSQTKETLTTRASSFGSKCELSPEFLKKV-AKCGVVENVLTWADFKQSKELKK 422

Query: 418  NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPL 477
            NDG K + + GI KL+DAN AGG++SE+CTLILTEGDSAKALAM+G+SVVGRD++GVFPL
Sbjct: 423  NDGAKRQRITGIPKLDDANDAGGKSSEKCTLILTEGDSAKALAMSGISVVGRDKYGVFPL 482

Query: 478  RGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLS 537
            RGKLLNVREAS  Q++ N+EI NIK+ILGL+ G +Y++ KSLRYGHLMIMTDQ       
Sbjct: 483  RGKLLNVREASHKQIMENAEITNIKRILGLQHGKDYDSTKSLRYGHLMIMTDQ------- 535

Query: 538  FLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA 597
                                 DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA
Sbjct: 536  ---------------------DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA 574

Query: 598  TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDF 657
            TNK  K LSFY+MP+YEAWKESL G    W+IKYYKGLGTSTSKEGKEYF+ +  HKKDF
Sbjct: 575  TNKQ-KTLSFYTMPEYEAWKESLNGETKGWTIKYYKGLGTSTSKEGKEYFRELVKHKKDF 633

Query: 658  VWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMAD 717
             WE + DG+AIE+AFSKKKIEARK WL  +EPG  LD   + I Y DFVNKELILFSMAD
Sbjct: 634  KWESEMDGDAIEMAFSKKKIEARKTWLRHYEPGTFLDMTAEKINYRDFVNKELILFSMAD 693

Query: 718  LQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
            L RSIPSMVDGLKPGQRKILFC FKRNF+ +AKVAQFSGYVSEHSAYHHGE SLASTI+G
Sbjct: 694  LARSIPSMVDGLKPGQRKILFCCFKRNFVTQAKVAQFSGYVSEHSAYHHGEASLASTIIG 753

Query: 778  MAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLN 837
            MAQ+FVGSNNINLL P GQFGTR QGGK+ AS RYIFT L+PITR LFP+ DD LLDYL 
Sbjct: 754  MAQNFVGSNNINLLSPEGQFGTREQGGKNHASPRYIFTCLAPITRALFPQADDVLLDYLK 813

Query: 838  EDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHP 897
            EDGQ IEPTWY PIIP VLVNGSEGIGTGWSS++PNYNPR+IVAN+RRLL G+ MEPMHP
Sbjct: 814  EDGQSIEPTWYCPIIPLVLVNGSEGIGTGWSSFVPNYNPREIVANLRRLLAGQEMEPMHP 873

Query: 898  WYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN 957
            WY+GF G+IE +A+K++G TYT+TG I++++ETT++I ELP+R+WTQDY+EFL+ ++  +
Sbjct: 874  WYKGFKGSIECSATKDSGFTYTITGAIDQIDETTIKISELPVRKWTQDYKEFLDVMMTPS 933

Query: 958  DS----FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
            D     FI+ FR+++ DT V FE+ LSEE+M     EGL+KKFKLTTTISTSNMHLFD+K
Sbjct: 934  DKNKEPFIKDFREHNTDTKVHFELSLSEENMAIALAEGLVKKFKLTTTISTSNMHLFDNK 993

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G+IKKYDTPEQILEEFFHIRL+ Y KRK VQL+NLE EL K++NKVRFILGVV GEI+VN
Sbjct: 994  GIIKKYDTPEQILEEFFHIRLDMYVKRKAVQLQNLEYELHKVDNKVRFILGVVKGEIIVN 1053

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLS 1133
            NRKR DLL +L++KGFTPFPK SKS +  V GA D   E +E  E V G+++ DY+YLLS
Sbjct: 1054 NRKRADLLADLQKKGFTPFPKKSKSSDPPVVGA-DPLPEDDEQDEKVKGIRAADYEYLLS 1112

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
            M IGTLT EKVQ L   RDK+  EV++L+KATPE+LW+KDLD   ++LD
Sbjct: 1113 MPIGTLTFEKVQQLRGQRDKMEGEVEELKKATPEALWIKDLDEFLVKLD 1161


>gi|168011945|ref|XP_001758663.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690273|gb|EDQ76641.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1238

 Score = 1729 bits (4477), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 829/1197 (69%), Positives = 981/1197 (81%), Gaps = 46/1197 (3%)

Query: 6    RLPLTTSNNANV-VGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEE 64
            ++PL +S+  NV       +K+IEE YQKK+QLEHILLRPDTY+GSIEK+TQ LW+YE+ 
Sbjct: 6    KVPLQSSSGFNVDANDPHGDKSIEETYQKKTQLEHILLRPDTYVGSIEKYTQTLWVYED- 64

Query: 65   SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
               M++R+I++VPGLYKIFDEILVNAADNKQRDP MD VKV ID + + ISV+N+G GVP
Sbjct: 65   -GKMVNRSITFVPGLYKIFDEILVNAADNKQRDPSMDTVKVEIDIDQNFISVYNNGAGVP 123

Query: 125  VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
            VEIH+EEGVYVPE+IFGHLLTSSNY+D+ KKTTGGRNGYGAKL NIFSTEF IETADG R
Sbjct: 124  VEIHKEEGVYVPEMIFGHLLTSSNYNDSEKKTTGGRNGYGAKLANIFSTEFTIETADGTR 183

Query: 185  LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
             ++YKQ+FTNNM  KSEP I+ CK  +NWTKVSFKPDL+KFNMTHLE DVVALM KRVVD
Sbjct: 184  QRRYKQIFTNNMSLKSEPKITTCKPYENWTKVSFKPDLSKFNMTHLESDVVALMSKRVVD 243

Query: 245  LAGCLGKSVKVELNGHRVPVKSFAEYVDMY--------PKSVTRFHERVNERWEICVTLS 296
            +AGC+GK  KVELNG R+P+KSF +YV +Y         + + R +E+V++RWEICV+LS
Sbjct: 244  IAGCIGKGCKVELNGKRLPIKSFQDYVGLYLSVANFNREEPLPRIYEKVSDRWEICVSLS 303

Query: 297  EGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVN 356
            +GQF QVSF N IATI+GGTHV YVA+Q+ +HV+ +VNKKNK A VK   +KNH+WVFVN
Sbjct: 304  DGQFNQVSFCNSIATIRGGTHVAYVADQIVSHVLGLVNKKNKTAGVKPFQIKNHMWVFVN 363

Query: 357  ALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK 416
            ALI+NP FDSQTKETLT R SSFGSKCELS EFLKKV AK G+VE +L+WA+FKQSK+LK
Sbjct: 364  ALINNPTFDSQTKETLTTRASSFGSKCELSAEFLKKV-AKCGVVENVLTWADFKQSKELK 422

Query: 417  KNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFP 476
            KNDG K + + GI KL+DAN AGGR+SEQCTLILTEGDSAKALAM+G+SVVGRD++GVFP
Sbjct: 423  KNDGAKRQRITGIPKLDDANDAGGRSSEQCTLILTEGDSAKALAMSGISVVGRDKYGVFP 482

Query: 477  LRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPL 536
            LRGKLLNVREAS  Q++ N+EI NIK+ILGL+ G +Y+N KSLRYGHLMIMTDQ      
Sbjct: 483  LRGKLLNVREASHKQIMENAEITNIKRILGLQHGKDYDNTKSLRYGHLMIMTDQ------ 536

Query: 537  SFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK 596
                                  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK
Sbjct: 537  ----------------------DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK 574

Query: 597  ATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKD 656
            A+NK  K+LSFY+MP+YEAWKESL G    W+IKYYKGLGTSTSKEGKEYF+ ++ HKKD
Sbjct: 575  ASNKQ-KMLSFYTMPEYEAWKESLNGETKGWTIKYYKGLGTSTSKEGKEYFRELSKHKKD 633

Query: 657  FVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMA 716
            F WE + DG+AIE+AFSKKKIEARK WL  +EPG  LD     IKYSDFVNKELILFSMA
Sbjct: 634  FKWESEMDGDAIEMAFSKKKIEARKTWLRHYEPGTFLDMTADKIKYSDFVNKELILFSMA 693

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            DL RSIPSMVDGLKPGQRKILFC FKRNF+ +AKVAQFSGYVSEHSAYHHGE SLASTI+
Sbjct: 694  DLARSIPSMVDGLKPGQRKILFCCFKRNFVTQAKVAQFSGYVSEHSAYHHGEASLASTII 753

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
            GMAQ+FVGSNNINLL P GQFGTR QGGK+ AS RYIFT L+PITR LFP+ DD LLDY+
Sbjct: 754  GMAQNFVGSNNINLLSPEGQFGTREQGGKNHASPRYIFTCLAPITRALFPQPDDVLLDYM 813

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             EDGQ IEP+WY PIIP VLVNGSEGIGTGWSS++PNYNPR+IVAN+RRLL G+ + PMH
Sbjct: 814  KEDGQSIEPSWYCPIIPLVLVNGSEGIGTGWSSFVPNYNPREIVANIRRLLAGQELTPMH 873

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ 956
            PWY+ F GTIE +A+K+ G+TYT+TG IE+++ETT++I ELP+R+WTQDY+EFL++++  
Sbjct: 874  PWYKSFMGTIECSATKDIGLTYTITGTIEQIDETTIKILELPVRKWTQDYKEFLDALMTP 933

Query: 957  NDS----FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDS 1012
            +D     FI+ FR+++ DT V FE+ LSEE+M     EGL+KKFKLTTTISTSNMHLFD+
Sbjct: 934  SDKNKEPFIKDFREHNTDTKVHFELTLSEENMAIALAEGLVKKFKLTTTISTSNMHLFDA 993

Query: 1013 KGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVV 1072
            KG+IKKYDTPEQILEEFFHIRL+ Y KRK VQL+NL+ EL+K++NKVRFILGVV GEI+V
Sbjct: 994  KGIIKKYDTPEQILEEFFHIRLDLYVKRKAVQLQNLQYELVKVDNKVRFILGVVKGEIIV 1053

Query: 1073 NNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLL 1132
            NNRKR DLL EL+ KGF PFPK +KS +  V GA D   E  E  E V GV+  DYDYLL
Sbjct: 1054 NNRKRIDLLSELQHKGFAPFPKKAKSPDPPVVGA-DPLPEDNEQDEKVKGVKVADYDYLL 1112

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            SM IG+LT EKVQ L   RDK+ EEV++L++ATPE+LW+KDLD   ++LD  ++ +A
Sbjct: 1113 SMPIGSLTYEKVQQLRGQRDKMEEEVEELKRATPEALWIKDLDEFLVKLDAQEEQEA 1169


>gi|302812673|ref|XP_002988023.1| hypothetical protein SELMODRAFT_127267 [Selaginella moellendorffii]
 gi|300144129|gb|EFJ10815.1| hypothetical protein SELMODRAFT_127267 [Selaginella moellendorffii]
          Length = 1151

 Score = 1680 bits (4351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 806/1169 (68%), Positives = 971/1169 (83%), Gaps = 43/1169 (3%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE+YQKK+ LEH+LLRPDTY+GSIEKHTQ LW+YE     +++R ++YVPGLYKIFD
Sbjct: 12   KTIEEIYQKKTPLEHVLLRPDTYVGSIEKHTQTLWVYE--GGQLVNRAVTYVPGLYKIFD 69

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDP MDAVKV I  E + ISV+N+GDGVPVE+H E+GVYVPE+IFGHLL
Sbjct: 70   EILVNAADNKQRDPSMDAVKVTISVEQNTISVYNNGDGVPVEVHNEQGVYVPEMIFGHLL 129

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDDN KKTTGGRNGYGAKL NIFSTEF+IETADGKR KKYKQVF+NNM  KSEP I
Sbjct: 130  TSSNYDDNEKKTTGGRNGYGAKLANIFSTEFVIETADGKRGKKYKQVFSNNMSAKSEPAI 189

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            S CK  +NWTKV+FKPDLAKF+MT+LE+DVVALM KRV+D+AGCLG++VKVELNG ++PV
Sbjct: 190  SSCKSNENWTKVTFKPDLAKFHMTYLEEDVVALMSKRVLDIAGCLGRTVKVELNGQKLPV 249

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            K+F++YV +Y  S        + R +ER N+RWE+CV+LS+GQFQQVSFVN IATI+GGT
Sbjct: 250  KTFSDYVGLYLASAQKGKEETLPRIYERANDRWEVCVSLSDGQFQQVSFVNSIATIRGGT 309

Query: 317  HVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            HV +V+ Q+ +H+  +VNKKNKNANVK   ++NHLWVFVN+LIDNPAFDSQTKETLT RQ
Sbjct: 310  HVQHVSEQIVSHIQEIVNKKNKNANVKGFQIRNHLWVFVNSLIDNPAFDSQTKETLTTRQ 369

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            +SFGSKCELS EFLKKV +K G+V+ +LSWA+FKQSK+LKKNDG K + + GI+KL+DAN
Sbjct: 370  TSFGSKCELSPEFLKKV-SKCGVVDNVLSWADFKQSKELKKNDGAKRQRLTGIAKLDDAN 428

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AGG+NSE CTLILTEGDSAKALAM+G+SVVGR+ +GVFPLRGKLLNVREA+  Q+++N+
Sbjct: 429  DAGGKNSEACTLILTEGDSAKALAMSGISVVGRNHYGVFPLRGKLLNVREATHKQIMDNA 488

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI +IK+ILGL+QG  Y N KSLRYGHLMIMTD                           
Sbjct: 489  EITSIKQILGLQQGKGYENTKSLRYGHLMIMTD--------------------------- 521

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAW 616
             QDHDGSHIKGL+INFIH+FWPSLLK+P FLVEFITPIVKAT+KNGKVLSFY+MP+YE+W
Sbjct: 522  -QDHDGSHIKGLIINFIHTFWPSLLKVPGFLVEFITPIVKATHKNGKVLSFYTMPEYESW 580

Query: 617  KESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKK 676
            KESL G    WSIKYYKGLGTST+KEGKEYF+++  HKKDF W++D+DG++IELAFSKKK
Sbjct: 581  KESLRGETKGWSIKYYKGLGTSTAKEGKEYFRDLVKHKKDFAWDNDEDGDSIELAFSKKK 640

Query: 677  IEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKI 736
             EARK WL  ++PG  LDQ ++ I YSDF+NKELILFS+ADL RS+PSMVDGLKPGQRKI
Sbjct: 641  TEARKIWLRGYQPGTFLDQTQRVITYSDFINKELILFSLADLARSVPSMVDGLKPGQRKI 700

Query: 737  LFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQ 796
            LF +FKRNF  +AKVAQFSGYVSEHSAYHHGEQSLASTI+GMAQ+FVGSNNIN+L P GQ
Sbjct: 701  LFAAFKRNFTSQAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQNFVGSNNINILAPIGQ 760

Query: 797  FGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVL 856
            FGTR+QGGKD ASARYI+T L+P+TR +FPK DD LL++L EDGQ IEP WY PI+P VL
Sbjct: 761  FGTRSQGGKDHASARYIYTSLTPLTRTIFPKPDDILLNFLREDGQSIEPFWYAPILPMVL 820

Query: 857  VNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGV 916
            VNGSEGIGTGWS+++PNYNPRDIV N++ LL  E +EPM PWY+GF GTI K+A+KE+GV
Sbjct: 821  VNGSEGIGTGWSTFVPNYNPRDIVTNLKHLLRDEQLEPMDPWYKGFKGTIVKSATKESGV 880

Query: 917  TYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSF----IRGFRQYSDDTT 972
            +YTVTGI+E+VNETT+R+ ELPIR+WTQDY+EFLE+++   +      I+ +R+++ DT 
Sbjct: 881  SYTVTGIVEQVNETTIRVLELPIRKWTQDYKEFLEALLCGTEKIKEPSIKDYREHNTDTR 940

Query: 973  VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
            V FE+ LSEE M     EGL KKFKL+TTISTSNM+LFD  G I+KYDTPEQILE+F+HI
Sbjct: 941  VHFEISLSEEKMAEALAEGLTKKFKLSTTISTSNMNLFDKDGHIRKYDTPEQILEDFYHI 1000

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            RLE Y KRK+VQ+ENL+ ELLKL+NKVRFILGVV GEIVVNNRKR +LL+EL+ KGFTPF
Sbjct: 1001 RLELYVKRKEVQVENLQYELLKLDNKVRFILGVVKGEIVVNNRKRAELLVELKTKGFTPF 1060

Query: 1093 PKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRD 1152
            PK +K+ +  V G      E+++  ++  GV++ DY+YLLSM IGTLTLEKVQ L  +RD
Sbjct: 1061 PKKAKASDLPVVGGDGSDVEADDEEKLNKGVRAGDYEYLLSMPIGTLTLEKVQQLCNERD 1120

Query: 1153 KLNEEVDDLRKATPESLWVKDLDALDMQL 1181
            KL  +V++L+K TP+ LW KDLD    QL
Sbjct: 1121 KLEGDVEELKKCTPKDLWEKDLDNFLEQL 1149


>gi|302782265|ref|XP_002972906.1| hypothetical protein SELMODRAFT_98330 [Selaginella moellendorffii]
 gi|300159507|gb|EFJ26127.1| hypothetical protein SELMODRAFT_98330 [Selaginella moellendorffii]
          Length = 1151

 Score = 1680 bits (4351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 807/1169 (69%), Positives = 971/1169 (83%), Gaps = 43/1169 (3%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE+YQKK+ LEH+LLRPDTY+GSIEKHTQ LW+YE     +++R ++YVPGLYKIFD
Sbjct: 12   KTIEEIYQKKTPLEHVLLRPDTYVGSIEKHTQTLWVYE--GGQLVNRAVTYVPGLYKIFD 69

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDP MDAVKV I  E + ISV+N+GDGVPVE+H E+GVYVPE+IFGHLL
Sbjct: 70   EILVNAADNKQRDPIMDAVKVTISVEQNTISVYNNGDGVPVEVHNEQGVYVPEMIFGHLL 129

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDDN KKTTGGRNGYGAKL NIFSTEF+IETADGKR KKYKQVF+NNM  KSEP I
Sbjct: 130  TSSNYDDNEKKTTGGRNGYGAKLANIFSTEFVIETADGKRGKKYKQVFSNNMSAKSEPAI 189

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            S CK  +NWTKV+FKPDLAKF+MT+LE+DVVALM KRV+D+AGCLG++VKVELNG ++PV
Sbjct: 190  SSCKSNENWTKVTFKPDLAKFHMTYLEEDVVALMSKRVLDIAGCLGRTVKVELNGQKLPV 249

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            K+F++YV +Y  S        + R +ER N+RWE+CV+LS+GQFQQVSFVN IATI+GGT
Sbjct: 250  KTFSDYVGLYLASAQKGKEETLPRIYERANDRWEVCVSLSDGQFQQVSFVNSIATIRGGT 309

Query: 317  HVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            HV +V+ Q+ +H+  +VNKKNKNANVK   ++NHLWVFVN+LIDNPAFDSQTKETLT RQ
Sbjct: 310  HVQHVSEQIVSHIQEIVNKKNKNANVKGFQIRNHLWVFVNSLIDNPAFDSQTKETLTTRQ 369

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            +SFGSKCELS EFLKKV +K G+V+ +LSWA+FKQSK+LKKNDG K + + GI+KL+DAN
Sbjct: 370  TSFGSKCELSPEFLKKV-SKCGVVDNVLSWADFKQSKELKKNDGAKRQRLTGIAKLDDAN 428

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AGG+NSE CTLILTEGDSAKALAM+G+SVVGR+ +GVFPLRGKLLNVREA+  Q+++N+
Sbjct: 429  DAGGKNSEACTLILTEGDSAKALAMSGISVVGRNHYGVFPLRGKLLNVREATHKQIMDNA 488

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI +IK+ILGL+QG  Y N KSLRYGHLMIMTD                           
Sbjct: 489  EITSIKQILGLQQGKGYENTKSLRYGHLMIMTD--------------------------- 521

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAW 616
             QDHDGSHIKGL+INFIH+FWPSLLK+P FLVEFITPIVKAT+KNGKVLSFY+MP+YE+W
Sbjct: 522  -QDHDGSHIKGLIINFIHTFWPSLLKVPGFLVEFITPIVKATHKNGKVLSFYTMPEYESW 580

Query: 617  KESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKK 676
            KESL G    WSIKYYKGLGTST+KEGKEYF+++  HKKDF W++D+DG++IELAFSKKK
Sbjct: 581  KESLRGETKGWSIKYYKGLGTSTAKEGKEYFRDLVKHKKDFAWDNDEDGDSIELAFSKKK 640

Query: 677  IEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKI 736
             EARK WL  ++PG  LDQ ++ I YSDF+NKELILFS+ADL RS+PSMVDGLKPGQRKI
Sbjct: 641  TEARKIWLRGYQPGTFLDQTQRVITYSDFINKELILFSLADLARSVPSMVDGLKPGQRKI 700

Query: 737  LFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQ 796
            LF +FKRNF  +AKVAQFSGYVSEHSAYHHGEQSLASTI+GMAQ+FVGSNNIN+L P GQ
Sbjct: 701  LFAAFKRNFTSQAKVAQFSGYVSEHSAYHHGEQSLASTIIGMAQNFVGSNNINILAPIGQ 760

Query: 797  FGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVL 856
            FGTR+QGGKD ASARYI+T L+P+TR +FPK DD LL++L EDGQ IEP WY PI+P VL
Sbjct: 761  FGTRSQGGKDHASARYIYTSLTPLTRTIFPKPDDILLNFLREDGQSIEPFWYAPILPMVL 820

Query: 857  VNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGV 916
            VNGSEGIGTGWS+++PNYNPRDIV N++ LL  E +EPM PWY+GF GTI K+ASKE+GV
Sbjct: 821  VNGSEGIGTGWSTFVPNYNPRDIVTNLKHLLRDEPLEPMDPWYKGFKGTIVKSASKESGV 880

Query: 917  TYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSF----IRGFRQYSDDTT 972
            +YTVTGI+E+VNETT+R+ ELPIR+WTQDY+EFLE+++   +      I+ +R+++ DT 
Sbjct: 881  SYTVTGIVEQVNETTIRVLELPIRKWTQDYKEFLEALLCGTEKIKEPSIKDYREHNTDTR 940

Query: 973  VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
            V FE+ LSEE M     EGL KKFKL+TTISTSNM+LFD  G I+KYDTPEQILE+F+HI
Sbjct: 941  VHFEISLSEEKMAEALAEGLTKKFKLSTTISTSNMNLFDKDGHIRKYDTPEQILEDFYHI 1000

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            RLE Y KRK+VQ+ENL+ ELLKL+NKVRFILGVV GEIVVNNRKR +LL+EL+ KGFTPF
Sbjct: 1001 RLELYVKRKEVQVENLQYELLKLDNKVRFILGVVKGEIVVNNRKRAELLVELKTKGFTPF 1060

Query: 1093 PKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRD 1152
            PK +K+ +  V G      E+++  ++  GV++ DY+YLLSM IGTLTLEKVQ L  +RD
Sbjct: 1061 PKKAKASDLPVVGGDGSDVEADDEEKLNKGVRAGDYEYLLSMPIGTLTLEKVQQLCNERD 1120

Query: 1153 KLNEEVDDLRKATPESLWVKDLDALDMQL 1181
            KL  +V++L+K TP+ LW KDLD    QL
Sbjct: 1121 KLEGDVEELKKCTPKDLWEKDLDNFLEQL 1149


>gi|357463091|ref|XP_003601827.1| DNA topoisomerase [Medicago truncatula]
 gi|355490875|gb|AES72078.1| DNA topoisomerase [Medicago truncatula]
          Length = 1345

 Score = 1558 bits (4035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 833/1485 (56%), Positives = 1013/1485 (68%), Gaps = 179/1485 (12%)

Query: 18   VGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVP 77
            +G   P+KTIEE       LEHILL PDTYIGS EKHTQ LW+YE E   M+HR++SYVP
Sbjct: 1    MGANIPSKTIEE-------LEHILLHPDTYIGSTEKHTQNLWVYENEE--MVHRSVSYVP 51

Query: 78   GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
            GLYKIFDEIL++A    +RDP MD++KV I+ E + +SV+N+G+GVPV +H+EE VYVPE
Sbjct: 52   GLYKIFDEILLDAT---KRDPSMDSLKVTIEPEGNTVSVYNNGEGVPVGLHKEENVYVPE 108

Query: 138  LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
            L FGHL    NYD NVKKTTGGRNGYGAKLTNIFS EF+IE  DG+RLKKYKQVF+NNMG
Sbjct: 109  LFFGHL----NYDYNVKKTTGGRNGYGAKLTNIFSKEFVIEIVDGRRLKKYKQVFSNNMG 164

Query: 198  KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL 257
             KSEP I++C   +NWTKV+FKPDL KF MT+LE+D+VALMKKRV+D+AGCLGK+VKVEL
Sbjct: 165  TKSEPVITECNASENWTKVTFKPDLEKFKMTYLEEDLVALMKKRVLDMAGCLGKTVKVEL 224

Query: 258  NGHRVPVKSFAEYVDMY--------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGI 309
            NG  +   SF +YVD++        P  + R H  V +RWEICV+LS+GQFQQVSFVN I
Sbjct: 225  NGTLICFMSFRDYVDLFLKCAEKSKPAPLPRIHAIVGDRWEICVSLSDGQFQQVSFVNSI 284

Query: 310  ATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTK 369
            ATIKGGTHVDY+ NQ+  HVM  VNKK K+ANVKAH VKNHLWVFVNALI+NPAFDSQTK
Sbjct: 285  ATIKGGTHVDYITNQIIAHVMYKVNKKKKDANVKAHTVKNHLWVFVNALINNPAFDSQTK 344

Query: 370  ETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGI 429
            ETL   Q SFGS C++ E  LK V  KSGI++TLLSWA+F +SKD K  DG K + +RGI
Sbjct: 345  ETLMTSQPSFGSYCDVPESMLKDV-EKSGIMDTLLSWADFNESKDFKTTDGRKIQRIRGI 403

Query: 430  SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS 489
             +LEDAN AGGRNSE+CTLILT+GDSAKALAMAGLSVVGRD +GVFPLR KLLNVR AS 
Sbjct: 404  VRLEDANDAGGRNSEKCTLILTDGDSAKALAMAGLSVVGRDHYGVFPLRDKLLNVRVASK 463

Query: 490  NQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
             Q+ +N E   I+KILGL+Q  +Y NVKSLRYGHLMIM D                    
Sbjct: 464  KQITDNQEFQIIQKILGLQQNKDYTNVKSLRYGHLMIMAD-------------------- 503

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYS 609
                    QDHDGSHIKGLLINFIHSFWPSLLK+PSF+VEF TPI++ ++ NG  LSFYS
Sbjct: 504  --------QDHDGSHIKGLLINFIHSFWPSLLKVPSFIVEFTTPIIRVSHSNGTKLSFYS 555

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            M DYE W++ +G NA+ W IKYYKGLGTSTS+EG+EYFQ++  H K+F+W          
Sbjct: 556  MSDYEVWRKRIGNNANCWKIKYYKGLGTSTSQEGREYFQDLDKHMKEFIW---------- 605

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
                               P    D + K I+Y  F+++ELILFS A+LQRSIPSMVDGL
Sbjct: 606  -------------------PSTCHDLEAKLIRYKSFIDRELILFSRAELQRSIPSMVDGL 646

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRKILFCSFK+   KE KV+QF GYVS HSAYHHGEQSLA+TI+GMAQDFVG NNIN
Sbjct: 647  KPGQRKILFCSFKKKLYKEIKVSQFIGYVSLHSAYHHGEQSLANTIIGMAQDFVGGNNIN 706

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL PNGQFGTRN GGKD AS +YI+T L+ +TRFLF +DDDKLL YLNE+G+ IEP WY+
Sbjct: 707  LLNPNGQFGTRNLGGKDHASPKYIYTELNIVTRFLFHEDDDKLLKYLNEEGKSIEPNWYI 766

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PIIP VLVNGSE IGTGWSSYIPNYNPR+I+ANVRRLLN E M PM PWYRGF GTIEK+
Sbjct: 767  PIIPLVLVNGSEEIGTGWSSYIPNYNPREIIANVRRLLNEEEMVPMDPWYRGFRGTIEKS 826

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ----NDSFIRGFR 965
              K+ G  Y V G + +++E T RI ELPIR+WT+DY++FLESI +     ND FI  FR
Sbjct: 827  M-KQGG--YRVNGSMVKIDEQTFRITELPIRKWTEDYKQFLESITEGAPNVNDPFIEDFR 883

Query: 966  QYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQI 1025
            Q  DD  +D EV +  + +    Q GL KKFKLT+ +STSNMHLFD++G IKKYDTPEQI
Sbjct: 884  QNGDDAIIDIEVKMKPDKVASVMQ-GLFKKFKLTSIVSTSNMHLFDAEGKIKKYDTPEQI 942

Query: 1026 LEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELR 1085
            LEEF+ +R+++Y++RKK  L NLE  LL L+NKVRFILGVVNGEI++ NRK+ +LL+EL+
Sbjct: 943  LEEFYPLRMDYYQRRKKYMLANLERLLLILDNKVRFILGVVNGEIIMINRKKAELLIELK 1002

Query: 1086 QKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQ 1145
            QKGF+P  +  KS E  V GA DE+ E         G    DY+Y LS+ IGTLTLE VQ
Sbjct: 1003 QKGFSPMLRKGKSAEPQVVGANDESSE---------GATWGDYEYFLSLPIGTLTLESVQ 1053

Query: 1146 GLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGD 1205
             LL ++ +  +E + L     +SLW+KDLD  + +LDELD  +A   EE  K     +  
Sbjct: 1054 KLLDEKAEKEKEHEVLMGTPTKSLWLKDLDEFEKKLDELDSKEA---EEDRKRSNQASKK 1110

Query: 1206 AGPKIVAKRA--PKNARKNDKKSNNARA--TEAMGEMDNVTKVVKPKGRAGLKKAPAEKL 1261
            A     AK A  P   RKN KK+ N       +  E++N  +V KPKG +  K    ++ 
Sbjct: 1111 AANGFAAKPAMKPPQPRKNTKKTKNVEPENDNSSMEIENAVEVAKPKGGSVFKN--TKEA 1168

Query: 1262 DDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKK 1321
            DDD           +  + E+LA+   E   ++SG ME+E+  VPA KK+ +KR  A+KK
Sbjct: 1169 DDD---------SYILSIQERLAAYNFESPGEKSGAMESEE-PVPAGKKQINKRGGAKKK 1218

Query: 1322 VVTVETSDSEDEIIIDDDEAFEIAAPEEGKKGGRKAAGNSKAAKPAAETKKRGPAKKQQP 1381
              T+      D  +IDDD+ FE                       +AE+    P      
Sbjct: 1219 SSTIGLESDSDNEVIDDDDDFE-----------------------SAESTATSP------ 1249

Query: 1382 EASLGQRLLTEMLKPAESSPEKKVRKMRASPFNKK-SGSMLGRAGT-----IEEPSGSSP 1435
                                EKKVRKMR SPFNKK SGS+L RA       IE+ S  S 
Sbjct: 1250 --------------------EKKVRKMRESPFNKKSSGSILDRAANKDTNQIEDLSAGSA 1289

Query: 1436 STS----EEVAEVL--PPKARPQRANRRQARYVLSDSESEKATDD 1474
            S S     EV E+   P +A+P  AN  Q +YV+S  ES+  +D+
Sbjct: 1290 SNSPIAKNEVVEIAPQPARAKPHGANPNQNKYVVSGYESDNDSDE 1334


>gi|255553522|ref|XP_002517802.1| DNA topoisomerase II, putative [Ricinus communis]
 gi|223543074|gb|EEF44609.1| DNA topoisomerase II, putative [Ricinus communis]
          Length = 1212

 Score = 1506 bits (3900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 804/1232 (65%), Positives = 948/1232 (76%), Gaps = 91/1232 (7%)

Query: 297  EGQ-FQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFV 355
            EG+ + +VSFVN IATIKGGTHVDYV +Q++N+++ VVNKKNKNAN+KAH+VKN+LWVFV
Sbjct: 14   EGENWTKVSFVNSIATIKGGTHVDYVTSQISNYLVGVVNKKNKNANIKAHHVKNYLWVFV 73

Query: 356  NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
            NALIDNPAFDSQTKETLTLRQS+FGSKCEL E+FLKKV AKS I+E LLSWA FK  K+L
Sbjct: 74   NALIDNPAFDSQTKETLTLRQSNFGSKCELPEDFLKKV-AKSDILENLLSWAKFKNDKEL 132

Query: 416  KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVG---RDRF 472
            KK DGTK   V  I KLEDAN AG +NS +CTLILTEGDSAK LA++GL  +    RD +
Sbjct: 133  KKTDGTKRGRV-NIPKLEDANEAGTKNSHKCTLILTEGDSAKTLAISGLGALPQDVRDLY 191

Query: 473  GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVL 532
            GVFPLRGKLLNVREA+  Q+  N EI +IKKILGL+Q  +Y++VK LRYGHLMIMTD   
Sbjct: 192  GVFPLRGKLLNVREATPKQLNENKEIESIKKILGLQQNKQYDSVKPLRYGHLMIMTD--- 248

Query: 533  LAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 592
                                     QD+DGSHIKGLLINFI+ FWPSLLKIPSFLVEFIT
Sbjct: 249  -------------------------QDYDGSHIKGLLINFIYYFWPSLLKIPSFLVEFIT 283

Query: 593  PIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITL 652
            PIVKAT+++GK+LSFY+MP+Y +WKESL GNA+ W+IKYYKGLGT+  KEG +YF++I  
Sbjct: 284  PIVKATHRSGKILSFYTMPEYYSWKESLMGNANGWTIKYYKGLGTNDKKEGMQYFRDIDK 343

Query: 653  HKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELIL 712
            H+KDFVW +++DG AIELAFSKKK++ RK WL  F+PG HL+QK K IKYSDF+NKELIL
Sbjct: 344  HQKDFVWMNEEDGTAIELAFSKKKVDERKNWLRHFQPGTHLEQKNKLIKYSDFINKELIL 403

Query: 713  FSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLA 772
            FS+ADLQRSIPSMVDGLKP QRKILF  FKRN +K+ KV Q  GYVSE SAYHHGEQSL 
Sbjct: 404  FSVADLQRSIPSMVDGLKPAQRKILFSCFKRNLVKDLKVVQLQGYVSEQSAYHHGEQSLQ 463

Query: 773  STILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKL 832
            STI+GMAQ+FVGSNNINLL P GQFGTR  GGKD AS RYI+T LSPITRFLFPKDDD L
Sbjct: 464  STIVGMAQNFVGSNNINLLAPKGQFGTRCSGGKDHASPRYIYTCLSPITRFLFPKDDDCL 523

Query: 833  LDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMM 892
            LDYL EDG  IEPTWY PIIP VLVNG EGIGTGWS++IPNYNPRDIVAN+RR LNGE M
Sbjct: 524  LDYLQEDGLSIEPTWYAPIIPLVLVNGCEGIGTGWSTFIPNYNPRDIVANLRRFLNGEKM 583

Query: 893  EPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLES 952
            EPMHPWY+GF GTIEK+ASKE G +Y V GIIEEVNETT+RI ELPIRRWT +Y++FL S
Sbjct: 584  EPMHPWYKGFKGTIEKSASKEGGGSYAVNGIIEEVNETTVRITELPIRRWTDEYKDFLNS 643

Query: 953  IIDQ---------NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTIS 1003
            +I+           D+FI+ FR+Y DD +V FEV LSEE M + K EGLLKKFKL TTIS
Sbjct: 644  VIENVRDEKGNLPKDAFIKDFRKYGDDVSVCFEVLLSEEKMKQVKDEGLLKKFKLATTIS 703

Query: 1004 TSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFIL 1063
            TSNMHLFD KGVIKKYD+PE+ILEEF H+R E YEKRK  +L +LE+E L LENKVRFIL
Sbjct: 704  TSNMHLFDPKGVIKKYDSPEEILEEFVHLRFELYEKRKNFKLASLEMEALILENKVRFIL 763

Query: 1064 GVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEV---- 1119
            GVV GEI+VNNRKR +LLLELRQKGFTPFPKN K +EAVVAGA D+TEESE   +V    
Sbjct: 764  GVVTGEIIVNNRKRAELLLELRQKGFTPFPKN-KPVEAVVAGAADDTEESESTEDVEENS 822

Query: 1120 VNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
              GVQ+ DY+YLLSM+IGTLTLEKVQ L AD+DK++EEV++LR+  P+ LW+KDL+A + 
Sbjct: 823  KTGVQATDYEYLLSMSIGTLTLEKVQKLCADKDKISEEVENLRRTAPKDLWLKDLEAFES 882

Query: 1180 QLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNAR-ATEAMGEM 1238
            QLD+LD  DA    ER K   + NG  G K V+++ PKN RKN+K + N   A E MG+ 
Sbjct: 883  QLDKLDAEDAL---ERQKSVKDTNGQGGFK-VSRQPPKNPRKNNKTAKNTEAAAEIMGQT 938

Query: 1239 DN-------VTKVVKPKGRAGLKKAPAEK------LDDDEEDEVPDLKQRLAKLNEQLAS 1285
             N       V++ VKPKGRA  KKAPA+K      + DDE+DEV  LK R       L +
Sbjct: 939  SNSAMETESVSEEVKPKGRAASKKAPAKKQEKPTPISDDEDDEVEALKDR-------LKA 991

Query: 1286 TKLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTV--ETSDSEDEIIIDDDEAFE 1343
             +L+ SP+QS  MET+  QVPA +KE SKR AAQKK V    E S+SEDE+ +DD+   E
Sbjct: 992  YRLDSSPEQSTTMETDMPQVPA-RKETSKRAAAQKKPVATISELSESEDEVDLDDESDVE 1050

Query: 1344 IA-APEEGKKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKPAES--- 1399
            +   PE  KKGGRK A NS+AAKP A TKKRGP KK+     LGQ+LLTEMLKPAE+   
Sbjct: 1051 VVPVPEAKKKGGRKPAANSRAAKPPAGTKKRGPTKKES--QGLGQKLLTEMLKPAENPGI 1108

Query: 1400 SPEKKVRKMRASPFNKKSGSMLGR------AGTIEEPSGSSPSTS--EEVAEVLPPKARP 1451
            SPEKKVRKMRASPFNKKSGS+LGR      A   EE SGS+ ++S  EE+ EV P +ARP
Sbjct: 1109 SPEKKVRKMRASPFNKKSGSVLGRVAKGSEATGSEEMSGSTSTSSNMEEITEV-PARARP 1167

Query: 1452 QRANRRQARYVLSDSESEKATDDSEFDEDEDE 1483
            QRANR+Q +YV+SDS+SE+A + S+ D + ++
Sbjct: 1168 QRANRKQTKYVISDSDSEEAVEISDSDSESNQ 1199



 Score = 47.4 bits (111), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 24/28 (85%)

Query: 196 MGKKSEPNISKCKEGDNWTKVSFKPDLA 223
           MGKKS P+I+KCKEG+NWTKVSF   +A
Sbjct: 1   MGKKSAPSITKCKEGENWTKVSFVNSIA 28


>gi|115448107|ref|NP_001047833.1| Os02g0699700 [Oryza sativa Japonica Group]
 gi|113537364|dbj|BAF09747.1| Os02g0699700, partial [Oryza sativa Japonica Group]
          Length = 956

 Score = 1498 bits (3879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 715/960 (74%), Positives = 815/960 (84%), Gaps = 43/960 (4%)

Query: 6   RLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES 65
           RLPL +S+  N        KTIEEMYQKK+QLEHILLRPDTYIGS+EKHT  LW+YE+ +
Sbjct: 7   RLPLQSSSGHNAAAGGGGGKTIEEMYQKKTQLEHILLRPDTYIGSVEKHTAQLWVYEDGA 66

Query: 66  KTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPV 125
             M+ R+++YVPGLYKIFDEILVNAADNKQRDP MD+++V ID +   ISV+N+GDG+PV
Sbjct: 67  --MVSRSVTYVPGLYKIFDEILVNAADNKQRDPSMDSLRVEIDADEGRISVYNNGDGIPV 124

Query: 126 EIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRL 185
           EIHQEEGVYVPE+IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEF+IETADG+R 
Sbjct: 125 EIHQEEGVYVPEMIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFVIETADGRRQ 184

Query: 186 KKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDL 245
           KKYKQVF+ NMGKKSEP I+KCK+G+NWT+V+FKPDLAKFNMTHLE+DVVALM+KRVVD+
Sbjct: 185 KKYKQVFSENMGKKSEPQITKCKQGENWTRVTFKPDLAKFNMTHLENDVVALMRKRVVDM 244

Query: 246 AGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR----------FHERVNERWEICVTL 295
           AG LGK+VKVEL+  +VPV SF++YV +Y KS ++            ++VN+RWE+CV+L
Sbjct: 245 AGTLGKTVKVELDHQKVPVHSFSDYVKLYIKSASKDRDDVNELPSISQKVNDRWEVCVSL 304

Query: 296 SEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFV 355
           SEGQFQQVSFVN IATIKGGTHVDYV NQ+A HVM +VNK+NKNA++KAHNVK+HLWVFV
Sbjct: 305 SEGQFQQVSFVNRIATIKGGTHVDYVTNQIATHVMNIVNKRNKNAHMKAHNVKSHLWVFV 364

Query: 356 NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
           NALIDNPAFDSQTKETLT RQ+SFGSKCELS++FLKKV   S IV  LLSWA FK SK+L
Sbjct: 365 NALIDNPAFDSQTKETLTTRQASFGSKCELSDDFLKKV-GSSAIVLNLLSWAEFKLSKEL 423

Query: 416 KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVF 475
           +K DG+K   + GI KLEDAN AGG++S  CTLILTEGDSAKALAMAG+SVVGRD +GVF
Sbjct: 424 QKTDGSKRSRLTGIPKLEDANGAGGKDSNNCTLILTEGDSAKALAMAGISVVGRDYYGVF 483

Query: 476 PLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAP 535
           PLRGKLLNVREAS  Q++ N+EI NIK+ILGL+ G +Y++ K LRYGHLMIMTDQ     
Sbjct: 484 PLRGKLLNVREASHKQIMENAEIQNIKQILGLQHGKQYDSTKGLRYGHLMIMTDQ----- 538

Query: 536 LSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIV 595
                                  DHDGSHIKGLLINFIHSFWPSL+KIPSFLVEFITPI+
Sbjct: 539 -----------------------DHDGSHIKGLLINFIHSFWPSLIKIPSFLVEFITPII 575

Query: 596 KATNKNGK--VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLH 653
           KATNK  K  VL FYSMP+YE WKESLGGNAS WSIKYYKGLGTSTS EG++YFQ+I  H
Sbjct: 576 KATNKRDKKIVLPFYSMPEYEQWKESLGGNASGWSIKYYKGLGTSTSSEGRQYFQDIAKH 635

Query: 654 KKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILF 713
           KKDFVW++DQD   IELAFSKK+I  RK+WL  F+ G HLD + KYIKYSDF+NKELI F
Sbjct: 636 KKDFVWKNDQDDNDIELAFSKKRITDRKEWLTNFQSGTHLDTEGKYIKYSDFINKELIQF 695

Query: 714 SMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAS 773
           SMADL RSIPSMVDGLKPGQRKILFCSFKRN +KE KVAQFSGYVSEHSAYHHGEQSLAS
Sbjct: 696 SMADLLRSIPSMVDGLKPGQRKILFCSFKRNLVKEIKVAQFSGYVSEHSAYHHGEQSLAS 755

Query: 774 TILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLL 833
           TI GMAQDFVGSNNINLLQPNGQFGTR+QGGKDAASARYIFT LSPITR +FPKDDD LL
Sbjct: 756 TITGMAQDFVGSNNINLLQPNGQFGTRDQGGKDAASARYIFTLLSPITRSIFPKDDDILL 815

Query: 834 DYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMME 893
           +YL+EDGQ IEPTWY+PI+P VLVNGSEGIGTGWS++IPNYNPRDIVAN+RRLLN E +E
Sbjct: 816 NYLDEDGQSIEPTWYVPILPMVLVNGSEGIGTGWSTFIPNYNPRDIVANLRRLLNDEPVE 875

Query: 894 PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI 953
           PM PWYRGF G+I+KT +K  GV+YTVTGIIE V++TTLRI ELPIRRW+QDY+EFL SI
Sbjct: 876 PMDPWYRGFKGSIQKTGTKAGGVSYTVTGIIEVVDDTTLRITELPIRRWSQDYKEFLISI 935


>gi|303276424|ref|XP_003057506.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461858|gb|EEH59151.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1473

 Score = 1419 bits (3674), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 707/1198 (59%), Positives = 882/1198 (73%), Gaps = 54/1198 (4%)

Query: 9    LTTSNNANVVGPTA-----PNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEE 63
            L  S+NA V  PTA     P K+IE++YQKK+QLEHILLRPDTY+GS EK     W+Y++
Sbjct: 32   LGDSSNAVVAPPTASATSSPGKSIEDIYQKKTQLEHILLRPDTYVGSCEKTEALTWVYDK 91

Query: 64   ESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGV 123
            E+  ++ R +S+VPGLYKIFDEILVNA DNK RDP M  ++V ID     I V N G+G+
Sbjct: 92   ETNKLVQRNMSFVPGLYKIFDEILVNATDNKVRDPTMVTLRVDIDSAEGTIKVFNDGNGI 151

Query: 124  PVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGK 183
            PVE+H+EEGVYVPELIFGHLLTSSNYDDN KK TGGRNGYGAKL NIFSTEFIIET DG 
Sbjct: 152  PVEMHKEEGVYVPELIFGHLLTSSNYDDNEKKVTGGRNGYGAKLANIFSTEFIIETCDGA 211

Query: 184  RLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVV 243
            R ++Y+QVF NNMG+K EP ++KCK+ DNWT ++FKPDL+KFNMTHLEDD VALM KRV 
Sbjct: 212  RERRYRQVFKNNMGEKCEPVVTKCKKSDNWTCITFKPDLSKFNMTHLEDDTVALMCKRVY 271

Query: 244  DLAGCLGKSVKVELNGHRVPVKSFAEYVDMY---PKSVTRFHERVNERWEICVTLSE-GQ 299
            D AG +GK+ K+ LNG R+ VK F++YVD+Y    ++  +  E+VN+RWE+CVT+S+ G 
Sbjct: 272  DAAGNIGKNTKIFLNGDRLKVKGFSDYVDLYLEGRENAPKVFEKVNDRWEVCVTISDTGN 331

Query: 300  FQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNAL 358
            FQQ SFVNGI T+KGGTHV+ VA+ VA  ++  + KK K+  N+K+ +VKNHLWVFVNAL
Sbjct: 332  FQQCSFVNGICTMKGGTHVNAVADDVATKLLEKIKKKEKSCKNLKSTHVKNHLWVFVNAL 391

Query: 359  IDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN 418
            I+NPAFDSQTKETL  R ++FGSK   S+  +KK+ + SGIVE +LSWA+FKQSK+LKKN
Sbjct: 392  IENPAFDSQTKETLNTRAANFGSKFSASDAVIKKMMS-SGIVEQILSWASFKQSKELKKN 450

Query: 419  DGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLR 478
            DG K   + GI KL+DAN AGG+NSE CTLILTEGDSAKALA++GLSVVGRDR+GVFPLR
Sbjct: 451  DGAKKTRLTGIPKLDDANDAGGKNSEHCTLILTEGDSAKALAVSGLSVVGRDRYGVFPLR 510

Query: 479  GKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSF 538
            GKLLNVR+AS  Q++NN+EI  IK+ILGLK G++Y + KSLRYGH+MIMTDQ        
Sbjct: 511  GKLLNVRDASHEQIMNNAEISYIKQILGLKHGIQYESAKSLRYGHIMIMTDQ-------- 562

Query: 539  LLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT 598
                                DHDGSHIKGLLINF+H+ +PSLLKIP FLVEFITPI+KAT
Sbjct: 563  --------------------DHDGSHIKGLLINFLHAHFPSLLKIPGFLVEFITPIIKAT 602

Query: 599  NKNGKVLSFYSMPDYEAWKESLG-GNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDF 657
             K  K   FY+MP+YE +KESLG      WSIKYYKGLGTSTSKE KEYF  +  H+K F
Sbjct: 603  -KGKKSEVFYTMPEYENFKESLGDAGTKGWSIKYYKGLGTSTSKEAKEYFAALAHHRKTF 661

Query: 658  VWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMAD 717
             W DD  G+ I++AFSKK+++ RK+WL  +EPG  LD     + Y DFVNKELILFS AD
Sbjct: 662  TWSDDNSGDLIDMAFSKKRVDDRKQWLTAYEPGTFLDMTGDDVGYDDFVNKELILFSRAD 721

Query: 718  LQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
            L RSIPS+VDG KP QRK+LF  FKR    + KVAQ SGYVSEHSAYHHGE SLASTI+G
Sbjct: 722  LMRSIPSVVDGFKPSQRKVLFSCFKRKLKSDIKVAQLSGYVSEHSAYHHGEASLASTIVG 781

Query: 778  MAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLN 837
            +AQDFVGSNN+NLL P+GQFGTR QGGKD AS RYIFTRL+PI R +FP+ DD LLDY+N
Sbjct: 782  LAQDFVGSNNVNLLVPSGQFGTRLQGGKDHASPRYIFTRLAPICRAIFPEADDALLDYIN 841

Query: 838  EDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHP 897
            EDGQ IEP +Y+PI+P VLVNG++GIGTGWS+ IPNYNPRD+  N+RRLLN E  E MHP
Sbjct: 842  EDGQVIEPDYYLPILPLVLVNGADGIGTGWSTSIPNYNPRDLTDNIRRLLNDEEPERMHP 901

Query: 898  WYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN 957
            WYR F G++ +   K   + Y ++G  E VNETTL I ELPIR WT DY+EFLE++++  
Sbjct: 902  WYRNFNGSLTEEIVK-GEIRYHISGAYEIVNETTLMISELPIRSWTTDYKEFLENMMNPK 960

Query: 958  DS----FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
            +     FI  ++++  DTTV F V ++ E M + ++EG+ KKFKL++ +STSNMH FD+ 
Sbjct: 961  EKNATPFITDYKEHHTDTTVHFVVTMTPEKMAQAQKEGIEKKFKLSSKVSTSNMHCFDAN 1020

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G I+KY  PE+I++ F  +RL+ YEKR+ + +   E EL +L NK RFIL VV+ ++ + 
Sbjct: 1021 GGIQKYSNPEEIMKAFVPLRLKAYEKRRTMLIRQAESELKRLANKTRFILAVVDEKLSIG 1080

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLL 1132
             +K++ L+ EL   GF    K  K     V+ A DE  E +E  E  + V+S  +YDYLL
Sbjct: 1081 RKKKSALVEELESLGFDKMTKTQK-----VSAAIDEIAEGDE--EAADAVESGANYDYLL 1133

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            SM +  LT EKV  L+ +++   EEV  L   T + LW+KDLDA +  L   D  DA+
Sbjct: 1134 SMPLWNLTQEKVDELVTEKESKEEEVAALHATTDKELWIKDLDAFEEALMAFDIEDAK 1191


>gi|307110827|gb|EFN59062.1| hypothetical protein CHLNCDRAFT_137783 [Chlorella variabilis]
          Length = 1566

 Score = 1416 bits (3665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 694/1195 (58%), Positives = 870/1195 (72%), Gaps = 60/1195 (5%)

Query: 6    RLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES 65
            + PL  +N           KTIEE YQK +Q+EH+LLRPDTYIGS E+  Q LW+++ E 
Sbjct: 17   KAPLAVANKGG--------KTIEETYQKVTQVEHVLLRPDTYIGSTERQQQQLWVHDGER 68

Query: 66   KTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPV 125
              M+H++I +VPGLYKIFDEILVNAADNK RD  MD ++V +D +   I V N+G G+PV
Sbjct: 69   --MVHKSIDFVPGLYKIFDEILVNAADNKVRDASMDTLRVDVDADKGSIKVMNNGAGIPV 126

Query: 126  EIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRL 185
            E+H+ EG+YVPELIFG+LLTSSNY+DN KK TGGRNGYGAKL NIFST+F++ET DGKR 
Sbjct: 127  EVHKTEGIYVPELIFGNLLTSSNYNDNEKKVTGGRNGYGAKLANIFSTKFVVETCDGKRG 186

Query: 186  KKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDL 245
            ++YKQ FT NM KK +P I+ CK  +NWT ++F PDLA+F M  LE + V LM+KRV D+
Sbjct: 187  RRYKQTFTQNMSKKGQPVITDCKADENWTCITFYPDLARFGMEDLEQESVELMRKRVYDM 246

Query: 246  AGCLGKSVKVELNGHRVPVKSFAEYVDMY--PK--SVTRFHERVNERWEICVTLSEGQFQ 301
            AG LGK+VKV  NG R+ VKSF EYVDMY  PK    TR +ER+++RWE+C+  +EGQF 
Sbjct: 247  AGLLGKTVKVFYNGQRLKVKSFQEYVDMYLGPKDEGPTRVYERISDRWEVCIAPTEGQFN 306

Query: 302  QVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDN 361
            QVSFVN I T KGGTHV+Y+++QV  ++  ++NKK+K ANVK    KN+LWVFVN LI+N
Sbjct: 307  QVSFVNAICTSKGGTHVNYISDQVVKYLCDMINKKDKKANVKPFMAKNYLWVFVNCLIEN 366

Query: 362  PAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT 421
            PAFDSQTK+TLTLR SSFGSKC+L + FLKKV A  G+V ++LS+A+FK  K+LKK DG 
Sbjct: 367  PAFDSQTKDTLTLRASSFGSKCDLPDAFLKKV-ANCGVVNSILSFASFKADKELKKGDGA 425

Query: 422  KTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKL 481
            K + + GI KLEDAN AGGRNS  CTLILTEGDSAK+LA+AGLSVVGRDRFGVFPLRGKL
Sbjct: 426  KRQRLTGIPKLEDANDAGGRNSAGCTLILTEGDSAKSLAVAGLSVVGRDRFGVFPLRGKL 485

Query: 482  LNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLW 541
            LNVR+AS+ Q+  N+EI NIK+ILGL+ G  Y + KSLRYGHLMIMTDQ           
Sbjct: 486  LNVRDASAAQITGNAEIQNIKQILGLQHGKVYTDAKSLRYGHLMIMTDQ----------- 534

Query: 542  FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
                             DHDGSHIKGL++N+ H F+PSLLK+P FLVEFITPI+KAT K 
Sbjct: 535  -----------------DHDGSHIKGLIMNYFHHFYPSLLKLPGFLVEFITPIIKAT-KG 576

Query: 602  GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWED 661
             + +SFY+MP+YE W E+   N   W+IKY+KGLGTST+ E K+YF NI  H+K+FVW+ 
Sbjct: 577  KETISFYTMPEYEEWSET--HNTRGWTIKYFKGLGTSTADEAKQYFANIQSHRKEFVWDG 634

Query: 662  DQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
            D DG+A+E+AFSKKK+E RK+WL  F PG  LD     I YS FV+KELILFS ADL+RS
Sbjct: 635  DADGQALEMAFSKKKVEDRKQWLQAFSPGTFLDHTADTISYSQFVHKELILFSRADLERS 694

Query: 722  IPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQD 781
            IP+MVDGLKPGQRKI+F  FKRN   + KV+Q SGYVSEHSAYHHGE SL+ TI+G+AQD
Sbjct: 695  IPNMVDGLKPGQRKIMFACFKRNLKTDVKVSQLSGYVSEHSAYHHGEASLSGTIVGLAQD 754

Query: 782  FVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQ 841
            FVGSNN+N L P GQFGTR QGGKDAAS RYIFTRL+P+TR LF + DD+LL YLNE+GQ
Sbjct: 755  FVGSNNVNYLVPQGQFGTRLQGGKDAASPRYIFTRLAPLTRHLFNEHDDRLLAYLNEEGQ 814

Query: 842  QIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRG 901
             IEP WYMP++PTVLVNG+EGIGTGWS+ IPN+NPRDIVAN+R +L+GE    M PWYRG
Sbjct: 815  SIEPEWYMPVVPTVLVNGAEGIGTGWSTSIPNFNPRDIVANLRLMLDGEQPVAMKPWYRG 874

Query: 902  FGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS-- 959
            F GTIE+  +K +G +Y + G+I +V++TTL I ELPIR+WTQDY+EFLE ++   D   
Sbjct: 875  FKGTIEEVPTKTSGKSYQICGVINQVDDTTLDITELPIRKWTQDYKEFLEEMVKPEDKNA 934

Query: 960  --FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIK 1017
              FI+ +++Y  D  V F V LSE  M      GLL KFKL T IST NM LF+++G I+
Sbjct: 935  TPFIQDYKEYHTDLVVHFRVTLSESKMREALAAGLLDKFKLKTKISTGNMMLFNAEGAIQ 994

Query: 1018 KYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
            KY +PE IL +F+ +RL +Y KR+   L   E +LL++ NKVRFIL VV G++ ++NR++
Sbjct: 995  KYASPEDILRDFYDLRLAYYVKRRAALLRAAEADLLRISNKVRFILAVVGGQLKLSNRRK 1054

Query: 1078 TDLLLELRQKGFTPFPKNSKSIE--AVVAGATDETEESEENPEVVNGVQSIDYDYLLSMA 1135
             D+  EL  +G+   P   K+ +  A+  G   + E     P          YDYLLSM 
Sbjct: 1055 KDVEGELEDEGYDKLPNQKKAAQQAAIDEGEDGDGEGGASAPA--------SYDYLLSMP 1106

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            + +LTLEKVQ L ++ +     V  LR  T + +W  DLDA +M LD  D+   R
Sbjct: 1107 LSSLTLEKVQALQSESEDWQATVQRLRATTEKDMWRSDLDAFEMALDGFDEEAER 1161


>gi|255076711|ref|XP_002502027.1| predicted protein [Micromonas sp. RCC299]
 gi|226517292|gb|ACO63285.1| predicted protein [Micromonas sp. RCC299]
          Length = 1459

 Score = 1412 bits (3654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 697/1190 (58%), Positives = 878/1190 (73%), Gaps = 54/1190 (4%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K IE++YQKK+QLEHILLRPDTY+GS EK  +  W+Y +++  ++ R +S+VPGLYKIFD
Sbjct: 52   KAIEDIYQKKTQLEHILLRPDTYVGSCEKTEEKAWVYCKDTNKLVQRQMSFVPGLYKIFD 111

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNA DNK RDP M  ++V IDQE   I V+N G+G+PVE+H+EEGVYVPELIFGHLL
Sbjct: 112  EILVNATDNKVRDPSMVTLRVDIDQEAGCIRVYNDGNGIPVEMHKEEGVYVPELIFGHLL 171

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNY+DN KK TGGRNGYGAKL NIFSTEF++ET DG R ++Y+QVF NNMG+K EP +
Sbjct: 172  TSSNYNDNEKKVTGGRNGYGAKLANIFSTEFVVETCDGSRERRYRQVFKNNMGEKCEPVV 231

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +KCK  DNWT ++FKPDLAKFNMT LEDD VALM KRV D AG +GK+ KV LNG R+ V
Sbjct: 232  TKCKPTDNWTCITFKPDLAKFNMTELEDDTVALMCKRVYDAAGNIGKNTKVFLNGERLKV 291

Query: 265  KSFAEYVDMY---PKSVTRFHERVNERWEICVTLSE-GQFQQVSFVNGIATIKGGTHVDY 320
            K F++YVD+Y    ++  + +E+VN+RWE+CVT+S+ G FQQVSFVNGI T+KGGTHV+ 
Sbjct: 292  KGFSDYVDLYLEGRENAPKVYEKVNDRWEVCVTISDSGNFQQVSFVNGICTMKGGTHVNQ 351

Query: 321  VANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
            VA++VA  ++  + KK K+  N+KA +VKNHLWVFVNALI+NPAFDSQTKETL  R S+F
Sbjct: 352  VADEVAGKLLEKIKKKEKSCKNLKAAHVKNHLWVFVNALIENPAFDSQTKETLNTRASNF 411

Query: 380  GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG 439
            GSK E S++ +K++   SGIVE +LSWA+FKQSK++KK+DG K   + GI KL+DAN AG
Sbjct: 412  GSKYEASDKVIKQMM-NSGIVEQILSWASFKQSKEMKKSDGKKATRLTGIPKLDDANDAG 470

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
            GRNSE CTLILTEGDSAKALA++GLSVVGRDR+GVFPLRGKLLNVR+AS +Q++NN+EI 
Sbjct: 471  GRNSEHCTLILTEGDSAKALAVSGLSVVGRDRYGVFPLRGKLLNVRDASHDQIMNNAEIN 530

Query: 500  NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
            +IK+ILGL+ G  Y + KSLRYGH+MIMTDQ                            D
Sbjct: 531  HIKQILGLRHGTTYESAKSLRYGHIMIMTDQ----------------------------D 562

Query: 560  HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT-NKNGKVLSFYSMPDYEAWKE 618
            HDGSHIKGLLINF+H+ +PSLLKIP FLVEFITPI+KAT  K  KV  FY++P+Y+ WKE
Sbjct: 563  HDGSHIKGLLINFLHAHFPSLLKIPGFLVEFITPIIKATKGKQSKV--FYTLPEYDNWKE 620

Query: 619  SL--GGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKK 676
                 G    W+IKYYKGLGTST+KE KEYF  +  HKK F W  D DG  I++AFSKK+
Sbjct: 621  HAEETGTGRGWNIKYYKGLGTSTAKEAKEYFAALDHHKKTFAWTTDGDGNLIDMAFSKKR 680

Query: 677  IEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKI 736
            +E RK WL  +EPG +LD     ++Y DF+NKELILFS ADL RSIPS+VDG KP QRK+
Sbjct: 681  VEDRKAWLNAYEPGTYLDMTGDDVRYDDFINKELILFSRADLMRSIPSVVDGFKPSQRKV 740

Query: 737  LFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQ 796
            LF  FKR    + KVAQ SGYVSEHSAYHHGE SLASTI+G+AQDFVGSNN+NLL P+GQ
Sbjct: 741  LFSCFKRKLKSDIKVAQLSGYVSEHSAYHHGEASLASTIVGLAQDFVGSNNVNLLVPSGQ 800

Query: 797  FGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVL 856
            FGTR QGGKD AS RYIFTRL+PI R +FP+ DD LLDYL+EDGQ IEP  Y+PI+P VL
Sbjct: 801  FGTRLQGGKDHASPRYIFTRLAPICRVIFPECDDALLDYLDEDGQVIEPEHYLPILPLVL 860

Query: 857  VNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGV 916
            VNG++GIGTGWS+ IPN+NPRDIVAN+RR+L+ E  E MHPWYR F GTIE+   K   +
Sbjct: 861  VNGADGIGTGWSTSIPNFNPRDIVANIRRILDDECTERMHPWYRNFKGTIEEEIVK-GEI 919

Query: 917  TYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS----FIRGFRQYSDDTT 972
             Y +TG  E V+ETTL I ELP+R WT DY++FLE+++   +     FI  ++++  DTT
Sbjct: 920  RYNITGKYEIVDETTLVITELPLRSWTTDYKDFLENMLSPKEKNAQPFITDYKEHHTDTT 979

Query: 973  VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
            V F V ++ E+M + +++G+ KKFKL   +STSNMH FD KG I KY +PE I+E F  +
Sbjct: 980  VHFIVTMTPENMAKAQKDGIEKKFKLCAKVSTSNMHAFDEKGGITKYSSPEAIMEAFVPL 1039

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            RL+ Y +R+ + +   E EL ++ NKVRFIL VV+GE+ +  +K++ L+ EL   G+   
Sbjct: 1040 RLDAYARRRAMLIRQAEFELKRMSNKVRFILAVVDGEMTIGRKKKSVLIEELEAAGYDKM 1099

Query: 1093 PKNSKSIEAVV-----AGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGL 1147
            PK +K+  A       +G +D +EE    P          YDYLLSM +  LT EKV  L
Sbjct: 1100 PKTAKAAAAADAEPAESGLSDISEEGAPAP-----ADGASYDYLLSMPLWNLTQEKVDEL 1154

Query: 1148 LADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMK 1197
            + ++     EV++L   T + LW++DLDA D  +D  D  DA+A EE  K
Sbjct: 1155 VEEQRVKTAEVEELHGTTDKQLWIRDLDAFDAAMDVFDAEDAKAAEELAK 1204


>gi|384250310|gb|EIE23790.1| DNA topoisomerase II [Coccomyxa subellipsoidea C-169]
          Length = 1189

 Score = 1406 bits (3639), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 699/1191 (58%), Positives = 865/1191 (72%), Gaps = 53/1191 (4%)

Query: 11   TSNNANVVGPT----APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK 66
             S  + V+ P+     P K+IEE+YQKKSQLEHILLRPDTYIGS E   Q LW+++ E  
Sbjct: 7    ASKASKVLQPSTSQNVPGKSIEEVYQKKSQLEHILLRPDTYIGSTEAQQQKLWVHDGEQL 66

Query: 67   TMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE 126
             +  + I +VPGLYKIFDEILVNAADNK RDPKMDA++V ID   + I V N+GDGVPVE
Sbjct: 67   AL--KEIEFVPGLYKIFDEILVNAADNKVRDPKMDALRVDIDPAENTIRVWNNGDGVPVE 124

Query: 127  IHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLK 186
            +H+EE VYVPELIFGHLLTSSNYDD+ KK TGGRNGYGAKL NIFSTEF+IET DGKR +
Sbjct: 125  VHKEEKVYVPELIFGHLLTSSNYDDDEKKVTGGRNGYGAKLANIFSTEFVIETCDGKRQR 184

Query: 187  KYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLA 246
            +Y+QVF +NMG K EP I  CK  DNWT V+FKPDLAKF M+ LE+  V+LM+KRV DLA
Sbjct: 185  QYRQVFRDNMGVKQEPVIKACKASDNWTCVTFKPDLAKFGMSVLEEQTVSLMRKRVYDLA 244

Query: 247  GCLGKSVKVELNGHRVPVKSFAEYVDMY--PKSVTRFHERVNERWEICVTLSEGQFQQVS 304
            G LGK VKV LNG  +P+KSF +YV +Y   K   R +E+VN+RWEIC+  SEGQFQQVS
Sbjct: 245  GVLGKGVKVYLNGKLLPIKSFQDYVGLYLKDKDTARVYEKVNDRWEICICASEGQFQQVS 304

Query: 305  FVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAF 364
            FVN I T+KGGTHV++V +Q+   +   +NK  K ANVK   VKN+L VFVN +I+NPAF
Sbjct: 305  FVNSICTVKGGTHVNHVVDQITKAICDKMNK-GKKANVKPFMVKNYLSVFVNCMIENPAF 363

Query: 365  DSQTKETLTLRQSSFGSKCELSE-EFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKT 423
            DSQTKETLTLR SSFGSKC++S+ +FLKK+ A  GI + + ++A FK  K+LKK DG K 
Sbjct: 364  DSQTKETLTLRASSFGSKCDVSDLKFLKKLEA-CGITDLVNAFATFKNEKELKKTDGAKR 422

Query: 424  EDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLN 483
              + G++KL+DAN AGGRNSEQCTLILTEGDSAK+L +AG+SV GRD+FGVFPLRGKLLN
Sbjct: 423  SRITGLTKLDDANDAGGRNSEQCTLILTEGDSAKSLVIAGMSVAGRDQFGVFPLRGKLLN 482

Query: 484  VREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFI 543
            VR+A+  Q+  N+EI  IK+ILGL+ G  Y++ K LRYGHLMIMTDQ             
Sbjct: 483  VRDAAVTQINGNAEINAIKQILGLQHGKSYDSTKQLRYGHLMIMTDQ------------- 529

Query: 544  LIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK 603
                           DHDGSHIKGL++NF+H F+PSLLK+  FL+EFITPIVK + K  +
Sbjct: 530  ---------------DHDGSHIKGLIMNFLHHFYPSLLKVKGFLLEFITPIVKVS-KGKQ 573

Query: 604  VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
             LSF++MP+YEAWK+S    +  W+IKYYKGLGTS  KE +EYF  I  H+K FV+  ++
Sbjct: 574  KLSFFTMPEYEAWKKS---ASPGWTIKYYKGLGTSDKKEAQEYFAGIDQHRKSFVYTGEE 630

Query: 664  DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIP 723
            D +AIELAFSKKKIE RK+WL  FEPG +LDQ    I YSDFVNKELILFS ADL+RSIP
Sbjct: 631  DDQAIELAFSKKKIEERKQWLAGFEPGTYLDQSVDEISYSDFVNKELILFSRADLERSIP 690

Query: 724  SMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFV 783
            +MVDGLKPGQRKILFC FKRN  ++ KVAQ SG+VS  +AYHHGE SL STI+G+A +F+
Sbjct: 691  NMVDGLKPGQRKILFCCFKRNIRRDVKVAQLSGFVSADTAYHHGEASLQSTIIGLAHNFI 750

Query: 784  GSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQI 843
            GSNN+NLL P GQFGTR QGGKDAA ARYI TRL PI R +F + DDKLLDYL E+GQ I
Sbjct: 751  GSNNVNLLVPQGQFGTRLQGGKDAAGARYIMTRLDPIARVVFHEHDDKLLDYLKEEGQSI 810

Query: 844  EPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFG 903
            EP WY+PI+P VLVNG+EGIGTGWS+YIPNYNPRDIVAN+RRLL GE +  M PWY GF 
Sbjct: 811  EPHWYLPILPMVLVNGAEGIGTGWSTYIPNYNPRDIVANLRRLLAGEEVVAMQPWYNGFK 870

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---- 959
            GTI++  SK AG +Y V G + +V+E+TL I ELP+R+WTQDY+EFLE +I   +     
Sbjct: 871  GTIQEIPSKTAGKSYNVHGTVAQVDESTLEITELPVRKWTQDYKEFLEGLIKPEEKTGPP 930

Query: 960  FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKY 1019
             +  +R++  D  V F + L    M      GL  KFKLT  +S  NM LFD +GVIK+Y
Sbjct: 931  ILSDYREHHSDADVHFTLQLLPGQMDACLAAGLHAKFKLTNKMSCGNMVLFDQRGVIKRY 990

Query: 1020 DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTD 1079
            +T E IL++F+ +R+++Y KR+   +   E ++  L N+ RFIL VV+GE+VV+NRK+ D
Sbjct: 991  ETAEDILKDFYELRIDYYAKRRLCLIREAEFQMRILANETRFILAVVSGELVVSNRKKAD 1050

Query: 1080 LLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            ++ +L + G+   P   K+  AVVA   D+ E +EE    V     + YDYLLSM I +L
Sbjct: 1051 IVADLERAGYDKMPPKKKA--AVVASMDDQEELAEEAIVEVK----VTYDYLLSMPISSL 1104

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            TLEKVQ L  + ++   EV  L    P  L+ KDLDA +  L E D   AR
Sbjct: 1105 TLEKVQALQDEAERQAAEVARLHATMPPQLYAKDLDAFEAALAERDAETAR 1155


>gi|302826295|ref|XP_002994651.1| hypothetical protein SELMODRAFT_138946 [Selaginella moellendorffii]
 gi|300137231|gb|EFJ04283.1| hypothetical protein SELMODRAFT_138946 [Selaginella moellendorffii]
          Length = 980

 Score = 1403 bits (3632), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 676/1007 (67%), Positives = 825/1007 (81%), Gaps = 41/1007 (4%)

Query: 187  KYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLA 246
            ++ QVF+N M  KSEP IS CK  +NWTKV+FKPDLAKF+MT+LE+DVVALM KRV+D+A
Sbjct: 1    RFDQVFSNIMSAKSEPAISSCKSNENWTKVTFKPDLAKFHMTYLEEDVVALMSKRVLDIA 60

Query: 247  GCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEG 298
            GCLG++VKVELNG ++PVK+F++YV +Y  S        + R +ER N+RWE+CV+LS+G
Sbjct: 61   GCLGRTVKVELNGQKLPVKTFSDYVGLYLASAQKGKEETLPRIYERANDRWEVCVSLSDG 120

Query: 299  QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNAL 358
            QFQQVSFVN IATI+GGTHV +V+ Q+ +H+  +VNKKNKNANVK   ++NHLWVFVN+L
Sbjct: 121  QFQQVSFVNSIATIRGGTHVQHVSEQIVSHIQEIVNKKNKNANVKGFQIRNHLWVFVNSL 180

Query: 359  IDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN 418
            IDNPAFDSQTKETLT RQ+SFGSKCELS EFLKKV +K G+V+ +LSWA+FKQSK+LKKN
Sbjct: 181  IDNPAFDSQTKETLTTRQTSFGSKCELSPEFLKKV-SKCGVVDNVLSWADFKQSKELKKN 239

Query: 419  DGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLR 478
            DG K + + GI+KL+DAN AGG+NSE CTLILTEGDSAKALAM+G+SVVGR+ +GVFPLR
Sbjct: 240  DGAKRQRLTGIAKLDDANDAGGKNSEACTLILTEGDSAKALAMSGISVVGRNHYGVFPLR 299

Query: 479  GKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSF 538
            GKLLNVREA+  Q+++N+EI +IK+ILGL+QG  Y N KSLRYGHLMIMTD         
Sbjct: 300  GKLLNVREATHKQIMDNAEITSIKQILGLQQGKGYENTKSLRYGHLMIMTD--------- 350

Query: 539  LLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT 598
                               QDHDGSHIKGL+INFIH+FWPSLLK+P FLVEFITPIVKAT
Sbjct: 351  -------------------QDHDGSHIKGLIINFIHTFWPSLLKVPGFLVEFITPIVKAT 391

Query: 599  NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFV 658
            +KNGKVLSFY+MP+YE+WKESL G    WSIKYYKGLGTST+KEGKEYF+++  HKKDF 
Sbjct: 392  HKNGKVLSFYTMPEYESWKESLRGETKGWSIKYYKGLGTSTAKEGKEYFRDLVKHKKDFA 451

Query: 659  WEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADL 718
            W++D+DG++IELAFSKKK EARK WL  ++PG  LDQ ++ I YSDF+NKELILFS+ADL
Sbjct: 452  WDNDEDGDSIELAFSKKKTEARKIWLRGYQPGTFLDQTQRVITYSDFINKELILFSLADL 511

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
             RS+PSMVDGLKPGQRKILF +FKRNF  +AKVAQFSGYVSEHSAYHHGEQSLASTI+GM
Sbjct: 512  ARSVPSMVDGLKPGQRKILFAAFKRNFTSQAKVAQFSGYVSEHSAYHHGEQSLASTIIGM 571

Query: 779  AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
            AQ+FVGSNNIN+L P GQFGTR+QGGKD ASARYI+T L+P+TR +FPK DD LL++L E
Sbjct: 572  AQNFVGSNNINILAPIGQFGTRSQGGKDHASARYIYTSLTPLTRTIFPKPDDILLNFLRE 631

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPW 898
            DGQ IEP WY PI+P VLVNGSEGIGTGWS+++PNYNPRDIV N++ LL  E +EPM PW
Sbjct: 632  DGQSIEPFWYAPILPMVLVNGSEGIGTGWSTFVPNYNPRDIVTNLKHLLRDEPLEPMDPW 691

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND 958
            Y+GF GTI K+ASKE+GV+YTVTGI+E+VNETT+R+ ELPIR+WTQDY+EFLE+++   +
Sbjct: 692  YKGFKGTIVKSASKESGVSYTVTGIVEQVNETTIRVLELPIRKWTQDYKEFLEALLCGTE 751

Query: 959  SF----IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
                  I+ +R+++ DT V FE+ LSEE M     EGL KKFKL+TTISTSNM+LFD  G
Sbjct: 752  KIKEPSIKDYREHNTDTRVHFEISLSEEKMAEALAEGLTKKFKLSTTISTSNMNLFDKDG 811

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             I+KYDTPEQILE+F+HIRLE Y KRK+VQ+ENL+ ELLKL+NKVRFILGVV GEIVVNN
Sbjct: 812  HIRKYDTPEQILEDFYHIRLELYVKRKEVQVENLQYELLKLDNKVRFILGVVKGEIVVNN 871

Query: 1075 RKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSM 1134
            RKR +LL+EL+ KGFTPFPK +K+ +  V G      E+++  ++  GV++ DY+YLLSM
Sbjct: 872  RKRAELLVELKTKGFTPFPKKAKASDLPVVGGDGSDVEADDEEKLNKGVRAGDYEYLLSM 931

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL 1181
             IGTLTLEKVQ L  +RDKL  +V++L+K TP+ LW KDLD    QL
Sbjct: 932  PIGTLTLEKVQQLCNERDKLEGDVEELKKCTPKDLWEKDLDNFLEQL 978


>gi|159484508|ref|XP_001700298.1| DNA topoisomerase II [Chlamydomonas reinhardtii]
 gi|158272465|gb|EDO98265.1| DNA topoisomerase II [Chlamydomonas reinhardtii]
          Length = 1167

 Score = 1363 bits (3529), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 685/1201 (57%), Positives = 857/1201 (71%), Gaps = 66/1201 (5%)

Query: 8    PLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT 67
            PL  SN A    P A  K+IEEMYQKK+QLEHI+LRPDTYIGS E+    +W++    + 
Sbjct: 3    PLGPSNAA---APAAGGKSIEEMYQKKTQLEHIILRPDTYIGSTERQPNHVWVHT--GQK 57

Query: 68   MIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEI 127
            M ++ +SY PGLYKIFDEILVNAADNK RD  MD +KV ID   + I V N+G G+PV++
Sbjct: 58   MEYKQVSYPPGLYKIFDEILVNAADNKVRDATMDTIKVDIDAATNSIRVWNNGKGIPVDV 117

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKT---------------TGGRNGYGAKLTNIFS 172
            H+EEGVYVPELIFGHLLTSSNY+D+ KK                TGGRNGYGAKL NIFS
Sbjct: 118  HKEEGVYVPELIFGHLLTSSNYNDSEKKALTVHTNIPYAPPPQITGGRNGYGAKLANIFS 177

Query: 173  TEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLED 232
            TEFIIET DG RLK+YKQ FT NM  K  P I+ CK  DNWT ++FKPDLA+F M  L++
Sbjct: 178  TEFIIETCDGSRLKRYKQTFTKNMQVKGTPKITDCKASDNWTSITFKPDLARFGMEALDE 237

Query: 233  DVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY--PKS-VTRFHERVNERW 289
            DVV+L+++RV D+AG LGK  KV  NG R+ +KSF EYVDMY  PK+ V RF ER+N+RW
Sbjct: 238  DVVSLLRRRVYDMAGVLGKGAKVYYNGERLSIKSFQEYVDMYLGPKNGVPRFCERINDRW 297

Query: 290  EICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKN-KNANVKAHNVK 348
            E+C+++++G FQQVSFVN I+T KGGTHVDY+ NQV  H    ++KK  K A +K   VK
Sbjct: 298  EVCISITDGSFQQVSFVNSISTQKGGTHVDYIVNQVVKHATEKLSKKTTKTAAIKPAMVK 357

Query: 349  NHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWAN 408
            NHLWVF+N  ++NPAFDSQTKETLTLR ++FGSKCEL    L KV  K+G+ ++++ +A 
Sbjct: 358  NHLWVFLNCYVENPAFDSQTKETLTLRATAFGSKCELPVPLLDKVL-KAGLSDSIIRFAE 416

Query: 409  FKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVG 468
            FK  K+LKK DGTK   + GI+KL+DAN AGG  S +CTLILTEGDSAKALA++GL VVG
Sbjct: 417  FKSQKELKKGDGTKRSRLHGITKLDDANDAGGPRSRECTLILTEGDSAKALAISGLGVVG 476

Query: 469  RDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMT 528
            RD +GVFPLRGKLLNVREAS+ Q+  N+EI NIK+I+GL+ G  Y N  SLRYGHLMIMT
Sbjct: 477  RDHYGVFPLRGKLLNVREASAAQIAANAEIQNIKQIMGLQHGKVYENTTSLRYGHLMIMT 536

Query: 529  DQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLV 588
            DQ                            DHDGSHIKGL++NF+HSF+PSLL+IP FL+
Sbjct: 537  DQ----------------------------DHDGSHIKGLIMNFLHSFFPSLLRIPGFLL 568

Query: 589  EFITPIVKAT-NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYF 647
            EFITPIVKA   ++ KV  FY+MP+YEAWKESLG   ++W IKYYKGLGTST +E +EYF
Sbjct: 569  EFITPIVKARRGRDTKV--FYTMPEYEAWKESLGNATTAWDIKYYKGLGTSTKEEAQEYF 626

Query: 648  QNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVN 707
              + LH+K+FVWE D+DG++IELAFSKK+++ RK+WL  F PG  LDQ    I YSDF+N
Sbjct: 627  SRLDLHRKEFVWEGDEDGDSIELAFSKKRVDDRKEWLSNFVPGTFLDQSADRISYSDFIN 686

Query: 708  KELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHG 767
            +ELILFS ADL RSIPSM+DGLKPGQRKIL+  FKRN  K+ KVAQ S YV+EHSAYHHG
Sbjct: 687  RELILFSRADLDRSIPSMLDGLKPGQRKILYACFKRNLKKDIKVAQLSAYVAEHSAYHHG 746

Query: 768  EQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPK 827
            E SLASTI+ +AQDFVGSNN+NLL P+GQFGTR QGGKDAASARYI+TRL+ +TR LF +
Sbjct: 747  EGSLASTIVNLAQDFVGSNNVNLLHPSGQFGTRLQGGKDAASARYIYTRLAALTRHLFNE 806

Query: 828  DDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL 887
            +DD+LL YLNE+GQ IEP WYMPI+PTVL+NG++GIGTGWS+ IPNYNPRDI+AN+RRLL
Sbjct: 807  NDDQLLTYLNEEGQSIEPEWYMPILPTVLINGADGIGTGWSTTIPNYNPRDIMANLRRLL 866

Query: 888  NGEMMEPMHPWYRGFGGTIEKTASKEAGV-TYTVTGIIEEVNETTLRIKELPIRRWTQDY 946
             GE  E MHPWYRGF G I + A+ ++G  +Y V+G + +    T+ I ELPIR+WTQDY
Sbjct: 867  EGEAQEAMHPWYRGFNGNIAEAATHKSGSRSYVVSGTVTQTGPNTIEITELPIRKWTQDY 926

Query: 947  REFLESIIDQNDS-------FIRGFRQYSDDTTVDFEVFLSEESM--MRTKQEGLLKKFK 997
            +EFLE+++   +         I  + ++  D+ V F V L    M  +     GL  KFK
Sbjct: 927  KEFLETLLRPTEKVRRDEAPIIADYSEHHSDSNVHFVVELLPGKMEELLASPGGLDGKFK 986

Query: 998  LTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLEN 1057
            LTT I+TSNM LFD  G+IK Y +PE I+ EF+ +RL++YEKR+   L+   L+  + +N
Sbjct: 987  LTTKIATSNMMLFDHSGMIKHYSSPEMIVAEFYELRLDYYEKRRIAMLKVASLDQKRADN 1046

Query: 1058 KVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENP 1117
            ++RFIL VV G + V  RKR DL  +L  +GF    K    ++  +    ++ EE E   
Sbjct: 1047 RIRFILAVVEGRLEVRGRKRADLERDLEAQGFDRLGKAGAKVKVRITEVAEDGEEGEGGE 1106

Query: 1118 EVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
              V       YDYLLSM+I  LT EK+  L  +  K  E V+ L   T   +W +DLDA 
Sbjct: 1107 AAVTASNGASYDYLLSMSIYNLTREKIAKLQEEAAKAKERVEYLCSITGRDMWAQDLDAF 1166

Query: 1178 D 1178
            +
Sbjct: 1167 E 1167


>gi|302844478|ref|XP_002953779.1| hypothetical protein VOLCADRAFT_94598 [Volvox carteri f. nagariensis]
 gi|300260887|gb|EFJ45103.1| hypothetical protein VOLCADRAFT_94598 [Volvox carteri f. nagariensis]
          Length = 1126

 Score = 1320 bits (3415), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1091 (58%), Positives = 803/1091 (73%), Gaps = 63/1091 (5%)

Query: 30   MYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVN 89
            MYQKK+QLEHI+LRPDTYIGS E+    +W++    + M  +T++Y PGLYKIFDEILVN
Sbjct: 1    MYQKKTQLEHIILRPDTYIGSTERQPNTIWVHN--GQKMELKTVNYPPGLYKIFDEILVN 58

Query: 90   AADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            AADNK RDP MD +KV +D  ++ I V NSG G+PVE+H+EEGVYVPELIFGHLLTSSNY
Sbjct: 59   AADNKVRDPTMDTIKVDVDPANNSIRVWNSGRGIPVEVHKEEGVYVPELIFGHLLTSSNY 118

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            +D+ KK TGGRNGYGAKL NIFSTEF +ET DG R ++YKQ FTNNM +K  P I+ CK 
Sbjct: 119  NDSEKKITGGRNGYGAKLANIFSTEFTVETCDGSRQRRYKQTFTNNMQQKGTPKITDCKA 178

Query: 210  GDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAE 269
             DNWT ++FKPDLAKF M+ L++D+V+++++RV D+AG LGK VKV  NG R+ +KSF E
Sbjct: 179  SDNWTCITFKPDLAKFGMSELDEDIVSVLRRRVFDMAGVLGKGVKVFYNGERLSIKSFQE 238

Query: 270  YVDMY--PK-------------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKG 314
            YVDMY  PK              + RF ER+N+RWEIC++L++G FQQVSFVN I+T KG
Sbjct: 239  YVDMYLGPKVKRTWFRGVPHDNGIPRFCERLNDRWEICISLTDGSFQQVSFVNAISTQKG 298

Query: 315  GTHVDYVANQVANHVMAVVNKKN-KNANVKAHNVKNHLWVFVNALIDNPAFDSQ------ 367
            GTHV+Y+ NQ+  H +  ++KK  K   +K   V+NHLW+F+N  ++NPAFDSQ      
Sbjct: 299  GTHVEYIVNQIVKHCIEKLSKKTAKTTAIKPAMVRNHLWIFLNCYVENPAFDSQASPFKI 358

Query: 368  ---TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTE 424
               TKETLTLR +SFGSKCEL    L KV  K+G+ ++++ +A FK  KDLKK DG K  
Sbjct: 359  VLLTKETLTLRSTSFGSKCELPIPLLDKVL-KAGLSDSIIKYAEFKSQKDLKKGDGVKRS 417

Query: 425  DVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNV 484
             + G++KL+DAN AGG  S  CTLILTEGDSAK+LA++GL VVGR+ +GVFPLRGKLLNV
Sbjct: 418  RLVGMAKLDDANDAGGPRSTDCTLILTEGDSAKSLAVSGLGVVGRNHYGVFPLRGKLLNV 477

Query: 485  REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            REAS+ Q+  N EI NIK+I+GL+ G  Y++  SLRYGHLMIMTDQ              
Sbjct: 478  REASAVQIAANQEIQNIKQIMGLQHGRVYDSTSSLRYGHLMIMTDQ-------------- 523

Query: 545  IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV 604
                          DHDGSHIKGL++NF+HSF+PSLLKIP F++EFITPIVKA  +  + 
Sbjct: 524  --------------DHDGSHIKGLIMNFMHSFFPSLLKIPGFMLEFITPIVKA-RRGRET 568

Query: 605  LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD 664
              FY+MP+YEAWKESL  N S W IKYYKGLGTST +E +EYF  + LH+K+FVW  D+D
Sbjct: 569  KVFYTMPEYEAWKESLDNNTSGWDIKYYKGLGTSTKEEAQEYFSRLNLHRKEFVWTGDED 628

Query: 665  GEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPS 724
            G+AIELAFSKK+++ RK+WL  F PG +LDQ  + I Y+DF+NKELILFS ADL RSIP+
Sbjct: 629  GDAIELAFSKKRVDDRKEWLSNFVPGTYLDQSAEKISYADFINKELILFSRADLDRSIPN 688

Query: 725  MVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVG 784
            ++DGLKPGQRKI+F  FKRN  K+ KVAQ S YV+EHSAYHHGEQSLASTI+ +AQDFVG
Sbjct: 689  VLDGLKPGQRKIMFACFKRNLKKDIKVAQLSAYVAEHSAYHHGEQSLASTIVNLAQDFVG 748

Query: 785  SNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIE 844
            SNNINLL P+GQFGTR QGGKDAASARYI+TRL  +TR LF + DD LL YLNE+GQ IE
Sbjct: 749  SNNINLLHPSGQFGTRLQGGKDAASARYIYTRLEKLTRHLFNEHDDVLLKYLNEEGQSIE 808

Query: 845  PTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGG 904
            P WY+PI+PTVLVNG+EGIGTGWS++IPNYNPRDI+AN+RRLLNGE  +P+HPWYRGF G
Sbjct: 809  PEWYLPILPTVLVNGAEGIGTGWSTFIPNYNPRDIIANLRRLLNGEEQDPLHPWYRGFTG 868

Query: 905  TIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS----F 960
            TI +   K    +Y V G++ +    T+ + ELP+R+WTQDY+EFLE+++   D      
Sbjct: 869  TITEVPHKSGSRSYVVGGLVAQTGPNTIEVTELPVRKWTQDYKEFLETLLRPQDKDEAPL 928

Query: 961  IRGFRQYSDDTTVDFEVFLSEESM--MRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKK 1018
            I  + ++  D+ V F V L    +  +     GL  KFKL   ++TSNM LF   G+IK 
Sbjct: 929  IADYHEHHSDSNVHFVVELLPGKLDELLATPGGLEAKFKLQAKVTTSNMMLFQKDGIIKH 988

Query: 1019 YDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRT 1078
            Y +PE I+ EFF +RL++YEKR+   L   +++ ++ +NKVRFIL VV+G++ V NRKR 
Sbjct: 989  YQSPEAIIAEFFELRLDYYEKRRIAMLRFAQMDQMRADNKVRFILAVVHGKLEVRNRKRV 1048

Query: 1079 DLLLELRQKGF 1089
            D+  +L  +GF
Sbjct: 1049 DIEKDLEAQGF 1059


>gi|412986492|emb|CCO14918.1| DNA topoisomerase II [Bathycoccus prasinos]
          Length = 1444

 Score = 1319 bits (3414), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 667/1207 (55%), Positives = 860/1207 (71%), Gaps = 58/1207 (4%)

Query: 8    PLTTSN-NANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK 66
            PL   N  A   G T     IE++YQKK+QLEHILLRPDTY+GS EK  +  W+Y+    
Sbjct: 34   PLADGNVTAGGGGKTTKKVAIEDIYQKKTQLEHILLRPDTYVGSCEKAEETAWVYDAAEN 93

Query: 67   TMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE 126
             ++ +T+++ PGLYKIFDEILVNA DNK RDP M  ++V ID+E   ISV N G G+PVE
Sbjct: 94   KLVQKTVAFTPGLYKIFDEILVNATDNKVRDPTMKELRVDIDKEKGTISVMNGGKGIPVE 153

Query: 127  IHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLK 186
            +H+EEGVYVPELIFGHLLTSSNY+DN KK TGGRNGYGAKL NIFS EFI+ET DG R +
Sbjct: 154  MHKEEGVYVPELIFGHLLTSSNYNDNEKKVTGGRNGYGAKLANIFSHEFIVETCDGSRER 213

Query: 187  KYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLA 246
            +YKQVF NNM +K EP I+KCK+ DNWT+++FKPD  KF MT LEDD +ALM KRV D A
Sbjct: 214  QYKQVFKNNMSEKGEPIITKCKKSDNWTRITFKPDFEKFGMTELEDDSIALMSKRVYDSA 273

Query: 247  GCLGKSVKVELNGHRVPVKSFAEYVDMY---PKSVTRFHERVNERWEICVTLSEGQ-FQQ 302
            G +GK+ K+ LNG ++ VKSF+EYVDMY    ++  + +E   +RW++CVT+S  Q FQQ
Sbjct: 274  GIIGKNTKIFLNGEQIKVKSFSEYVDMYLQDTENAPKVYEAQGDRWQVCVTVSNTQQFQQ 333

Query: 303  VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDN 361
             SFVNGI T+KGGTHV  +A+ +A  ++  + KK K+  N+K+  VKNHLWVFVNA I+N
Sbjct: 334  CSFVNGICTMKGGTHVANIADGIAGELLKKIQKKEKSCKNLKSFQVKNHLWVFVNAQIEN 393

Query: 362  PAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT 421
            PAFDSQTKETL  + S+FGSK  +S++ +K++ A + +VE ++SWA FKQSKDLKK    
Sbjct: 394  PAFDSQTKETLITKASNFGSKFSVSDKLIKQLMA-TPLVENIMSWAQFKQSKDLKK---- 448

Query: 422  KTEDVR-----GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFP 476
             T+ V+     GI KL+DAN AGGRNS+ CTLILTEGDSAKALA++GLS+VGRD +GVFP
Sbjct: 449  -TDGVKRLRLTGIPKLDDANNAGGRNSKDCTLILTEGDSAKALAVSGLSIVGRDNYGVFP 507

Query: 477  LRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEY--NNVKSLRYGHLMIMTDQVLLA 534
            LRGKLLNVR+AS +QV NN EI +IK+ILGL+ G  Y  +++K+LRYG LMIMTD     
Sbjct: 508  LRGKLLNVRDASFDQVKNNVEITHIKQILGLQHGKTYDEDSIKTLRYGKLMIMTD----- 562

Query: 535  PLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPI 594
                                   QDHDGSHIKGLLINF+H+ +PSLLKIP FL+EFITPI
Sbjct: 563  -----------------------QDHDGSHIKGLLINFLHAHFPSLLKIPGFLLEFITPI 599

Query: 595  VKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHK 654
            +KAT K  +   FY++P+YE WK  +  +   W+IKYYKGLGTST+KE KEYF  I LH+
Sbjct: 600  IKAT-KGQQTRVFYTLPEYENWK-LVNNDGKGWAIKYYKGLGTSTAKEAKEYFAAIELHR 657

Query: 655  KDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFS 714
            K F WE D DG+ I+++FSKK++E RK+WL  +E G  LDQ  + ++Y +F+NKELILFS
Sbjct: 658  KTFCWESDGDGDLIDMSFSKKRVEDRKRWLSAYEEGTFLDQSGETVRYDEFINKELILFS 717

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
            +ADL RSIPS +DG KP QRK++F  FKR    + KVAQ SGYVSEHSAYHHGE SLAST
Sbjct: 718  LADLMRSIPSAIDGFKPSQRKVMFSCFKRKLKSDIKVAQLSGYVSEHSAYHHGEASLAST 777

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +AQDFVG+NNINLL P+GQFGTR QGGKD AS RYIFTRL+ + R +FP+ DD LL+
Sbjct: 778  IVNLAQDFVGTNNINLLVPSGQFGTRLQGGKDHASPRYIFTRLAQLARVVFPECDDALLN 837

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            Y +EDGQ+IEPT+YMP+IPTVL+NG+EGIGTGWS+ IPNYN RD+++NVR +LN E    
Sbjct: 838  YNDEDGQKIEPTYYMPVIPTVLINGAEGIGTGWSTSIPNYNARDVISNVRAILNEEEPTQ 897

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII 954
            M PWYR F G I +   K     +  TG     +E TL I ELP+R WTQDY+EFLE +I
Sbjct: 898  MMPWYRHFKGEITEEIFK-GERRFIATGSYHIRDECTLEITELPLRTWTQDYKEFLEELI 956

Query: 955  ---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFD 1011
               D+   FI  +++Y  DT+V F + +   ++ + ++EG++KKFKL + IS SNMH F+
Sbjct: 957  APKDKKAPFITDYKEYHTDTSVHFVITMPPANLAKAEEEGIVKKFKLASKISCSNMHAFN 1016

Query: 1012 SKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIV 1071
               +I KY++ E I++ F  +RL+ YE+R+++ ++  E EL +L NK RFIL VV G +V
Sbjct: 1017 EHSIITKYESAEDIMKSFVPLRLKAYEERRQMLIKVAESELKRLANKTRFILAVVEGSLV 1076

Query: 1072 VNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA-TDETEESEENPEVVNGVQSIDYDY 1130
            VN +K+ +L+ EL    +   PK   S  A  A   TDE + + +  +  N      YDY
Sbjct: 1077 VNRKKKAELVEELEMMMYDKLPKTKTSASAAAAIVQTDENDIAADESDDANA----SYDY 1132

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LLSM +  LTLEKV+ L+ ++++   EV  LR  T + LW  DLDAL+  LD+L+  D  
Sbjct: 1133 LLSMPLWNLTLEKVEDLVTEKEEKEAEVALLRGTTDKDLWFTDLDALEENLDQLEDDDVA 1192

Query: 1191 AEEERMK 1197
            AEEE  K
Sbjct: 1193 AEEEMQK 1199


>gi|58258575|ref|XP_566700.1| DNA topoisomerase II [Cryptococcus neoformans var. neoformans JEC21]
 gi|134106673|ref|XP_778347.1| hypothetical protein CNBA3470 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50261050|gb|EAL23700.1| hypothetical protein CNBA3470 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|57222837|gb|AAW40881.1| DNA topoisomerase II, putative [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1272

 Score = 1318 bits (3410), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 665/1176 (56%), Positives = 842/1176 (71%), Gaps = 63/1176 (5%)

Query: 19   GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPG 78
             PT+ NK   E+YQK SQ EH+L RPDTYIGS+E  TQ +WI   E+KTM+HR I++VPG
Sbjct: 101  APTS-NKNASEVYQKLSQREHVLKRPDTYIGSVEAITQPMWILNPETKTMVHRPITFVPG 159

Query: 79   LYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
              KIFDEILVNA+DNK  DP MD++KVVID+E + ISV+N+G G+PVE+H +EGV +PEL
Sbjct: 160  FLKIFDEILVNASDNKINDPTMDSIKVVIDREKNAISVYNNGRGIPVEMHTKEGVMIPEL 219

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            IFGHLL  SN+DD+ KK TGGRNGYGAKL NI+S EFI+ETAD    KKYKQ+F+NNM K
Sbjct: 220  IFGHLLAGSNFDDDQKKLTGGRNGYGAKLANIYSHEFIVETADKVNSKKYKQIFSNNMSK 279

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
            K  P I+  K+G+ WTK++FKPDL +F M  ++DD  AL+ KRV D+AG + K VKV LN
Sbjct: 280  KGTPKITDNKKGEEWTKITFKPDLERFGMNGIDDDTNALLMKRVYDMAGTV-KDVKVFLN 338

Query: 259  GHRVPVKSFAEYVDMYPKSVTR----------------FHERVNERWEICVTLSEGQFQQ 302
              R+ VK+F +YV+MY  + T                  +E  N+RWE+   LS+G+F+Q
Sbjct: 339  DERIKVKNFKQYVEMYLNASTTATSEAAGGAAVTKPPIIYEVANKRWEVAFALSDGEFKQ 398

Query: 303  VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNP 362
            VSF N IAT KGGTHVD +A Q+AN +M  + KKNK A VK   +KNH+W+FVNALI+NP
Sbjct: 399  VSFTNSIATTKGGTHVDMIATQLANKLMDQIKKKNKAAPVKPFQIKNHMWIFVNALIENP 458

Query: 363  AFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
            AFDSQTKE LTL+ S+FGSKCELSEEF+KKV AK+GI++ +L+WA FKQ + LKK DGTK
Sbjct: 459  AFDSQTKENLTLKSSAFGSKCELSEEFIKKV-AKTGIIDNVLNWARFKQDQILKKTDGTK 517

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
               + GI KLEDAN AGGRNS+ CTLILTEGDSAKALA++GL+VVGRD +GVFPLRGKLL
Sbjct: 518  RSRISGIVKLEDANNAGGRNSKNCTLILTEGDSAKALAVSGLAVVGRDEYGVFPLRGKLL 577

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            NVREA  +Q++ N EI +IK+ILGLK   +Y    SLRYGHLMIMTDQ            
Sbjct: 578  NVREAGHDQIVKNVEIQHIKQILGLKHNQDYATADSLRYGHLMIMTDQ------------ 625

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG 602
                            DHDGSHIKGL+INF+  F+PSLL+IP+FLVEFITPIVK   K  
Sbjct: 626  ----------------DHDGSHIKGLIINFLDHFYPSLLRIPNFLVEFITPIVKVW-KGK 668

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            K +SFY+MP YE WK +   N   W  KYYKGLGTSTS + K+YF ++  H+  F     
Sbjct: 669  KEISFYTMPQYEEWK-AQNNNGRGWESKYYKGLGTSTSADAKKYFSDLDKHRLAFETMQP 727

Query: 663  QDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
            +D + I++AF+KKK + RK+WL QF+PG +LD   + +  SDFVNKELILFSMAD  RSI
Sbjct: 728  EDRQLIDMAFNKKKADDRKEWLRQFKPGTYLDHDVQSLPISDFVNKELILFSMADNIRSI 787

Query: 723  PSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDF 782
            PS+ DGLKPGQRK+LF  FKRN  KE KVAQ +GYVSE +AYHHGE SL STI+G+AQ+F
Sbjct: 788  PSVADGLKPGQRKVLFGCFKRNLTKEIKVAQLAGYVSEKTAYHHGEASLTSTIVGLAQNF 847

Query: 783  VGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQ 842
            VGSNNINLL PNGQFGTR  GGKDAASARYIFT L  +TR +F   DD LL+YL EDG  
Sbjct: 848  VGSNNINLLDPNGQFGTRLAGGKDAASARYIFTNLPRMTRAIFHPADDGLLNYLVEDGMS 907

Query: 843  IEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGF 902
            IEP ++MP +P VL+NG++GIGTGWS+ IPNYNP DIV N+RR++ GE  E M PW+RGF
Sbjct: 908  IEPDYFMPTVPMVLINGADGIGTGWSTAIPNYNPVDIVENLRRMMRGEEPEKMTPWFRGF 967

Query: 903  GGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSF-- 960
             G IE+    +    Y V+GIIE++N+TTL I ELPIRRWTQD++E LE +    D    
Sbjct: 968  KGFIERIDQDK----YKVSGIIEKINDTTLEITELPIRRWTQDFKEMLEEMTTGTDKVPQ 1023

Query: 961  -IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKY 1019
             I+ + ++  DTTV F V ++E+++   ++EG  K+FKLTT++ T NM  FD  G IKKY
Sbjct: 1024 TIKDYEEHHTDTTVHFRVHMTEKNLADAEKEGFDKRFKLTTSLGTGNMVCFDLNGKIKKY 1083

Query: 1020 DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTD 1079
             +PE+ILEEFFH RLEFY  RK+   + L  +  +L N+ RF+  ++  E+VV+ ++R D
Sbjct: 1084 ASPEEILEEFFHKRLEFYGHRKQHLADELNRQFERLSNQARFVHMIITKELVVSGKRRPD 1143

Query: 1080 LLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            ++ ELR   F PFPK  ++ E     A +E E+ +E        Q+ DYDYLL MAI +L
Sbjct: 1144 IVAELRSLKFKPFPKKERAKEEGENEAAEEEEDGDE-------GQASDYDYLLGMAIWSL 1196

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            T EKV+ LLA+RD   +E+ +L K +P ++W +DLD
Sbjct: 1197 TSEKVEKLLAERDAKEQELIELLKLSPNNIWDRDLD 1232


>gi|321251923|ref|XP_003192225.1| DNA topoisomerase II [Cryptococcus gattii WM276]
 gi|317458693|gb|ADV20438.1| DNA topoisomerase II, putative [Cryptococcus gattii WM276]
          Length = 1377

 Score = 1316 bits (3406), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 667/1207 (55%), Positives = 851/1207 (70%), Gaps = 66/1207 (5%)

Query: 13   NNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRT 72
            N  + V     NK   E+YQK SQ EH+L RPDTYIGS+E  TQ +W+   E+KTM+HR 
Sbjct: 93   NAESSVKAATSNKNASEVYQKLSQREHVLKRPDTYIGSVEAITQPMWVLNPETKTMMHRP 152

Query: 73   ISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEG 132
            I++VPG  KIFDEILVNA+DNK  DP MD++KVVID+E + +SV+N+G G+PVE+H +EG
Sbjct: 153  ITFVPGFLKIFDEILVNASDNKINDPTMDSIKVVIDREKNTVSVYNNGRGIPVEMHTKEG 212

Query: 133  VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVF 192
            V +PELIFGHLL  SN+DD+ KK TGGRNGYGAKL NI+S EF++ETAD    KKYKQ+F
Sbjct: 213  VMIPELIFGHLLAGSNFDDDQKKLTGGRNGYGAKLANIYSHEFVVETADKVNSKKYKQIF 272

Query: 193  TNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKS 252
            +NNM KK  P I+  K+G+ WTK++FKPDL +F M  ++DD  AL+ KRV D+AG + K 
Sbjct: 273  SNNMSKKGIPKITDNKKGEEWTKITFKPDLERFGMDGIDDDTNALLMKRVYDMAGTV-KD 331

Query: 253  VKVELNGHRVPVKSFAEYVDMY-------------PKSVTR---FHERVNERWEICVTLS 296
            VKV LN  R+ VK+F +YV+MY               +VT+    +E  N RWE+   LS
Sbjct: 332  VKVFLNDERIKVKNFKQYVEMYLNASTTAASEAAGGAAVTKPPIIYEVANRRWEVAFALS 391

Query: 297  EGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVN 356
            +G+F+QVSF N IAT KGGTHVD +A Q+AN +M  + KKNK A VK   +KNH+W+FVN
Sbjct: 392  DGEFKQVSFTNSIATTKGGTHVDMIATQLANKLMDQIKKKNKAAPVKPFQIKNHMWIFVN 451

Query: 357  ALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK 416
            ALI+NPAFDSQTKE LTL+ S+FGSKCELSEEF+KKV AK+GI++ +L+WA FKQ + LK
Sbjct: 452  ALIENPAFDSQTKENLTLKSSAFGSKCELSEEFIKKV-AKTGIIDNVLNWARFKQDQILK 510

Query: 417  KNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFP 476
            K DGTK   + GI KLEDAN AGGRNS+ CTLILTEGDSAKALA++GL+VVGRD +GVFP
Sbjct: 511  KTDGTKRSRISGIVKLEDANNAGGRNSKNCTLILTEGDSAKALAVSGLAVVGRDEYGVFP 570

Query: 477  LRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPL 536
            LRGKLLNVREA  +Q++ N EI +IK+ILGLK   +Y +V SLRYGHLMIMTDQ      
Sbjct: 571  LRGKLLNVREAGHDQIVKNVEIQHIKQILGLKHNQDYASVDSLRYGHLMIMTDQ------ 624

Query: 537  SFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK 596
                                  DHDGSHIKGL+INF+  F+PSLL+IP+FLVEFITPIVK
Sbjct: 625  ----------------------DHDGSHIKGLIINFLDHFYPSLLRIPNFLVEFITPIVK 662

Query: 597  ATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKD 656
               K  K +SFY+MP YE WK +   N   W  KYYKGLGTSTS + K+YF ++  H+  
Sbjct: 663  VW-KGKKEISFYTMPQYEEWK-AQNNNGRGWESKYYKGLGTSTSADAKKYFGDLDKHRLA 720

Query: 657  FVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMA 716
            F     +D + I++AF+KKK + RK+WL QF+PG +LD   + +  SDFVNKELILFSMA
Sbjct: 721  FETMQPEDRQLIDMAFNKKKADDRKEWLRQFKPGTYLDHDIQSLPISDFVNKELILFSMA 780

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D  RSIPS+ DGLKPGQRK+LF  FKRN  KE KVAQ +GYVSE +AYHHGE SL STI+
Sbjct: 781  DNIRSIPSVADGLKPGQRKVLFGCFKRNLTKEIKVAQLAGYVSEKTAYHHGEASLTSTIV 840

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
            G+AQ+FVGSNNINLL PNGQFGTR  GGKDAASARYIFT L  +TR +F   DD LL+YL
Sbjct: 841  GLAQNFVGSNNINLLDPNGQFGTRLAGGKDAASARYIFTNLPRMTRAIFHPADDGLLNYL 900

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             EDG  IEP ++MP +P VL+NG++GIGTGWS+ IPNYNP DIV N+RR++ GE  E M 
Sbjct: 901  IEDGMSIEPDYFMPTVPMVLINGADGIGTGWSTAIPNYNPVDIVENLRRMMRGEEPEEMT 960

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ 956
            PW+RGF G+IE+    +    Y V+G IE++N+TTL I ELPIRRWTQD++E LE +   
Sbjct: 961  PWFRGFKGSIERIDQDK----YKVSGKIEKINDTTLEITELPIRRWTQDFKEMLEEMTTG 1016

Query: 957  NDSF---IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
             D     I+ + ++  DTTV F V ++E+++   ++EG  K+FKLTT++ T NM  FD  
Sbjct: 1017 TDKVPQTIKDYEEHHTDTTVHFRVHMTEKNLADAEKEGFDKRFKLTTSLGTGNMVCFDLN 1076

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G IKKY +PE+ILEEFFH RLEFY  RK+   + L  +  +L N+ RF+  ++  E+VV+
Sbjct: 1077 GKIKKYASPEEILEEFFHKRLEFYGHRKQHLADELNRQFERLSNQARFVHMIITKELVVS 1136

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLS 1133
             ++R D++ ELR   F PFPK  +        A +E        E  +  Q+ DYDYLL 
Sbjct: 1137 GKRRPDIVAELRSLKFRPFPKKER--------AKEEGGNEAAEEEEGDEGQASDYDYLLG 1188

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL--DMQLD-ELDKSDAR 1190
            MAI +LT EKV+ LL +RD   +E+ +L K +P  +W +DLD    + QL  E D +DA+
Sbjct: 1189 MAIWSLTSEKVEKLLTERDAKEQELIELLKLSPNDIWDQDLDNFLAEWQLALEADIADAK 1248

Query: 1191 AEEERMK 1197
              + + K
Sbjct: 1249 GSKPKTK 1255


>gi|392577303|gb|EIW70432.1| hypothetical protein TREMEDRAFT_43154 [Tremella mesenterica DSM 1558]
          Length = 1344

 Score = 1303 bits (3372), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 689/1387 (49%), Positives = 904/1387 (65%), Gaps = 123/1387 (8%)

Query: 19   GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPG 78
            GPT   ++  +MYQK SQLEH+L RPD+YIGS+E  TQ +W+   E+KTM+ R  ++VPG
Sbjct: 9    GPTGAKRSASDMYQKLSQLEHVLKRPDSYIGSVEAITQMMWVLNAETKTMVFRNTTFVPG 68

Query: 79   LYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
             +KIFDEILVNAADNK  D  MD +K+ ID+E + ISVHN+G G+P+E+H++EG+ +PEL
Sbjct: 69   FFKIFDEILVNAADNKINDATMDTIKIHIDREKNQISVHNNGRGIPIEMHKKEGIMIPEL 128

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            IFGHLLTSSNYDD+ KK TGGRNGYGAKL NI+S EFI+ETAD    KKYKQVF++NMGK
Sbjct: 129  IFGHLLTSSNYDDDQKKLTGGRNGYGAKLANIYSLEFIVETADKTNGKKYKQVFSHNMGK 188

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
            KS P I+  K+G+ +T+++F PDL +F M  ++DD  AL+ KRV D+AG + K +KV LN
Sbjct: 189  KSPPKITDNKKGEEYTRITFTPDLKRFGMNGIDDDTYALLTKRVYDVAGTV-KDIKVYLN 247

Query: 259  GHRVPVKSFAEYVDMYPKSVTR----------------FHERVNERWEICVTLSEGQFQQ 302
              R+ +K F +YV+MY  + T+                 +E  N+RWE+   LS+G+++ 
Sbjct: 248  DERLKIKGFKQYVEMYLNASTQAISDAAGGAAVPKPTIIYESPNKRWEVAFALSDGEYRH 307

Query: 303  VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNP 362
            VSF N I+TIKGGTHVD ++ Q+AN +M  + KKNK A VKA  +KNH+W+FVNAL++NP
Sbjct: 308  VSFANSISTIKGGTHVDMISTQLANKLMDQIKKKNKAAPVKAFQIKNHMWIFVNALVENP 367

Query: 363  AFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
            AFDSQTKETLTL+ S+FGS+CELSE+F+KK  +KSGI++ +L+WA FKQ + LKK+DG K
Sbjct: 368  AFDSQTKETLTLKSSAFGSRCELSEDFVKKAVSKSGIIDNVLNWAKFKQDQILKKSDGAK 427

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
               + GI KLEDAN AGGRN+ +CTLILTEGDSAKALA++GL VVGRD +GVFPLRGKLL
Sbjct: 428  RSRISGIVKLEDANNAGGRNASRCTLILTEGDSAKALAVSGLGVVGRDDYGVFPLRGKLL 487

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            NVREA  +Q++ N EI +IK+ILGLK   +Y +  SLRYGH+MIMTDQ            
Sbjct: 488  NVREAGHDQIVKNVEIQHIKQILGLKHNQDYLSTDSLRYGHVMIMTDQ------------ 535

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG 602
                            DHDGSHIKGL+INF+  F+PSLL+IP FLVEFITPIVK T K  
Sbjct: 536  ----------------DHDGSHIKGLIINFLDHFYPSLLRIPDFLVEFITPIVKVT-KGK 578

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            + +SFY+MP YE WK +   +   W  KYYKGLGTSTS + K+YF  +  H+  F    +
Sbjct: 579  QEMSFYTMPQYEEWKAA-HNDGRGWDAKYYKGLGTSTSADAKKYFSALERHRLAFETMKN 637

Query: 663  QDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
            +D   I++AF+KKK + RK+WL QF+PG  LD     +  SDFVNKELILFSMAD  RSI
Sbjct: 638  EDRALIDMAFNKKKADDRKEWLRQFKPGTFLDHDVHTVPISDFVNKELILFSMADNIRSI 697

Query: 723  PSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDF 782
            PS+ DGLKPGQRK+LF  FKRN  KE KVAQ +GYVSE +AYHHGEQSL STI+G+AQ+F
Sbjct: 698  PSVADGLKPGQRKVLFGCFKRNLTKEIKVAQLAGYVSEKTAYHHGEQSLTSTIVGLAQNF 757

Query: 783  VGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQ 842
            VGSNNINLL PNGQFGTR  GGKDAASARYI+T +  +TR +F   DD LLDY+ EDG  
Sbjct: 758  VGSNNINLLAPNGQFGTRIAGGKDAASARYIYTEIPRMTRAIFHSADDGLLDYMLEDGMG 817

Query: 843  IEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGF 902
            IEP +Y+P++P VL+NG++GIGTGWS+ IPNYNP DIV N+R+++ GE  E M+PW+RGF
Sbjct: 818  IEPDYYLPVVPLVLINGADGIGTGWSTSIPNYNPVDIVNNLRKMMRGEEPERMNPWFRGF 877

Query: 903  GGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND---S 959
             G+IE+    +    Y V+GIIE+VN  TL I ELPIR+WTQD++E LE +    D   S
Sbjct: 878  RGSIERVEQDK----YKVSGIIEKVNNNTLEITELPIRKWTQDFKEMLEEMTTGTDKVPS 933

Query: 960  FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKY 1019
             ++ + ++  DTTV F + L++  M   ++EG  K+FK++TTISTSNM  FD  G IKKY
Sbjct: 934  TVKDYEEHHTDTTVHFRLHLADNHMRAAEEEGFEKRFKMSTTISTSNMVCFDMNGKIKKY 993

Query: 1020 DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTD 1079
             + E+IL +FFH RLEFY  RK+   + L  +  KL N+ RF+  +++ E+ V+N+K+  
Sbjct: 994  SSAEEILSDFFHKRLEFYALRKQHLADELNRQFEKLSNQARFVQMIISKELSVSNKKKAV 1053

Query: 1080 LLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            L+ ELR   F PFPK  K  E  V    +E +E           Q+ DYDYLL MAI +L
Sbjct: 1054 LVAELRTLNFKPFPKGKKKDEGEVEPNLEEEDEG----------QASDYDYLLGMAIWSL 1103

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEE------ 1193
            T EKV+ LLA+RD   +E+ +L K + ++LW +DLD    + + L   D  A +      
Sbjct: 1104 TAEKVEKLLAERDGKEQELIELLKLSAQNLWDRDLDKFLSEWESLLLDDVSAAKTNKPKT 1163

Query: 1194 -------ERMKIKGNGNG-------------------------------------DAGPK 1209
                   E+ K + NG                                        AG +
Sbjct: 1164 KAALKVAEKKKRRANGEDSDESDSFMPTKAKPKPKPKAKASPVKVSPLKRESAHLSAGDE 1223

Query: 1210 IVAKRAP--KNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEED 1267
              AK+AP  K A K   K       ++  E+ N+     PK  +   K P   LDD++E 
Sbjct: 1224 PPAKKAPSSKPAVKTKPKPKIIHDEDSDDEIYNIP---APKASSSKAKIP---LDDEDES 1277

Query: 1268 EVPDLK-QRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVE 1326
            ++  +   +  K      +T      D     +     VPA +  P     A KK   VE
Sbjct: 1278 DIEVMSPPKAVKSKPAPRATTKSKKADSDFDEDDSDDFVPAPRAAPRTGRGATKKTAYVE 1337

Query: 1327 TSDSEDE 1333
             SD ED+
Sbjct: 1338 MSDDEDD 1344


>gi|326427379|gb|EGD72949.1| DNA topoisomerase II, variant [Salpingoeca sp. ATCC 50818]
          Length = 1761

 Score = 1295 bits (3351), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 647/1170 (55%), Positives = 829/1170 (70%), Gaps = 59/1170 (5%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+EE+YQKK+QLEHILLRPDTYIGS+E +T+ L++ + E+   + R I+YVPGLYKIFD
Sbjct: 30   KTVEEIYQKKTQLEHILLRPDTYIGSVESNTKNLFVVDPEA-GFVQREITYVPGLYKIFD 88

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EI+VNAADNK RDP MD +KV ID+    ISV+N+G G+PV++H +EGVYVPELIFGHLL
Sbjct: 89   EIIVNAADNKIRDPTMDCIKVTIDKAKAEISVYNTGKGIPVQVHAKEGVYVPELIFGHLL 148

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDDN KK TGGRNGYGAKL NIFST+F++ET D +  KKY+QVF +NM  K +P I
Sbjct: 149  TSSNYDDNQKKVTGGRNGYGAKLCNIFSTKFVVETCDTETGKKYRQVFRDNMAIKEDPVI 208

Query: 205  SKCKEGD-NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
             K K  D ++T+++F+PDL+KF+M+ L+DD++ALM +RV D+AG   + +KV LN  R+P
Sbjct: 209  VKTKSSDKDFTRITFRPDLSKFHMSELDDDIIALMARRVYDVAGTT-RGIKVYLNNERLP 267

Query: 264  VKSFAEYVDMYPKS----VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
            V+ F +YV++  +         HE VN+RWE+C+TLSE  FQQ+SFVN IAT KGGTHV+
Sbjct: 268  VRHFKDYVNLVLRDQNVDTKVVHEVVNDRWEVCMTLSENGFQQMSFVNSIATTKGGTHVN 327

Query: 320  YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
            YVA+Q+ + +++ + +KNK A VK H VKNH+W+F+N LI+NP+FDSQTKE +T R   F
Sbjct: 328  YVADQIVSGLLSTIKRKNKGAAVKPHQVKNHMWLFINCLIENPSFDSQTKENMTRRSKDF 387

Query: 380  GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK-NDGTKTEDVRGISKLEDANLA 438
            GS   LS++FLK +   +GIV+ +L+WA  K    L K + G+K   + GI KL+DAN A
Sbjct: 388  GSNPVLSDKFLKNI-KDTGIVDAVLNWAKLKSQAQLSKASSGSKKCKISGIPKLDDANEA 446

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            GGRNS +CTLILTEGDSAKALA++GL V+GRD +GVFPLRGKLLNVREAS  Q+++N+E+
Sbjct: 447  GGRNSSKCTLILTEGDSAKALAVSGLGVLGRDYYGVFPLRGKLLNVREASHKQIMDNAEV 506

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
             NI KI+GLK G EY   K LRYG LMIMTDQ                            
Sbjct: 507  KNIAKIMGLKFGHEYTTTKQLRYGRLMIMTDQ---------------------------- 538

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKE 618
            D DGSHIKGLLINFIH FWPSLLK+P FLVEF+TPIVK T K  + +SF+++P YE W E
Sbjct: 539  DQDGSHIKGLLINFIHHFWPSLLKMPDFLVEFVTPIVKCT-KGKQEVSFFTIPQYETWAE 597

Query: 619  SLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIE 678
               GN   W IKYYKGLGTST +E KEYF ++  H+  F +E D+D E I +AFSKK +E
Sbjct: 598  Q-QGNLKGWRIKYYKGLGTSTPQEAKEYFSHMDDHQIPFSYEGDKDFEDIVMAFSKKHVE 656

Query: 679  ARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 738
            ARK+WL  F PG +LD     I YSDF+NKELILFSMAD  RSIPS++DGLKPGQRK+LF
Sbjct: 657  ARKQWLKNFVPGTYLDHATDAICYSDFINKELILFSMADNVRSIPSIMDGLKPGQRKVLF 716

Query: 739  CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFG 798
              FKR    E KVAQ +GYVSEHSAYHHGE SLA TI+GMAQ FVGSNN+NLL P GQFG
Sbjct: 717  SCFKRKLKDEIKVAQLAGYVSEHSAYHHGEMSLAGTIVGMAQRFVGSNNLNLLLPIGQFG 776

Query: 799  TRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVN 858
            TR  GGKDAAS+RYIFT LSP+ R +F   DD LL++L +DGQ IEP +Y PI+P VLVN
Sbjct: 777  TRLAGGKDAASSRYIFTSLSPLARKIFHLADDALLNHLEDDGQTIEPEFYAPILPMVLVN 836

Query: 859  GSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTY 918
            GS+GIGTGWSS +PNYNPRD+V  +  ++ G+  + +HPWY GF G I      +    Y
Sbjct: 837  GSDGIGTGWSSSVPNYNPRDLVNALIAMIEGQEPDELHPWYAGFTGEITPKGKDK----Y 892

Query: 919  TVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQYSDDTTVDF 975
             V G +++++ETT+ I ELPIR WTQ Y+EFLE +   +      I  F QY  DTTV F
Sbjct: 893  AVRGTLKKLDETTIEISELPIRTWTQPYKEFLEGLAADDGKKPPQILEFSQYHTDTTVRF 952

Query: 976  EVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLE 1035
             V ++ E M   + +GL K FKL  +ISTSNM LFD +G IKKY+  ++IL +FF +RL 
Sbjct: 953  VVSMTPEQMQAAETKGLYKVFKLEGSISTSNMTLFDPQGRIKKYEGVQEILRDFFDVRLR 1012

Query: 1036 FYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKN 1095
             Y+KRK +  + +  E  K++NKVRFIL V++G +V++NRK+ D+L ELR KGF  FPK 
Sbjct: 1013 LYQKRKSLLADCMTSEYKKMDNKVRFILDVISGSLVISNRKKADILQELRAKGFAAFPKP 1072

Query: 1096 SKS--------IEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGL 1147
                       ++   AGA   ++E E   E  +     D+DYLLSM +  LT+E+V  L
Sbjct: 1073 KGKKGAKTVGDLDDDAAGAPPSSDEDEALEESAS-----DFDYLLSMPMWNLTMERVDKL 1127

Query: 1148 LADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
              +R+    E++ L + TP+ LW +DL A 
Sbjct: 1128 TEERNGTEAELNALLEKTPQDLWKEDLTAF 1157


>gi|326427380|gb|EGD72950.1| DNA topoisomerase II [Salpingoeca sp. ATCC 50818]
          Length = 1795

 Score = 1294 bits (3349), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 648/1173 (55%), Positives = 828/1173 (70%), Gaps = 65/1173 (5%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+EE+YQKK+QLEHILLRPDTYIGS+E +T+ L++ + E+   + R I+YVPGLYKIFD
Sbjct: 64   KTVEEIYQKKTQLEHILLRPDTYIGSVESNTKNLFVVDPEAG-FVQREITYVPGLYKIFD 122

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EI+VNAADNK RDP MD +KV ID+    ISV+N+G G+PV++H +EGVYVPELIFGHLL
Sbjct: 123  EIIVNAADNKIRDPTMDCIKVTIDKAKAEISVYNTGKGIPVQVHAKEGVYVPELIFGHLL 182

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDDN KK TGGRNGYGAKL NIFST+F++ET D +  KKY+QVF +NM  K +P I
Sbjct: 183  TSSNYDDNQKKVTGGRNGYGAKLCNIFSTKFVVETCDTETGKKYRQVFRDNMAIKEDPVI 242

Query: 205  SKCKEGD-NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
             K K  D ++T+++F+PDL+KF+M+ L+DD++ALM +RV D+AG   + +KV LN  R+P
Sbjct: 243  VKTKSSDKDFTRITFRPDLSKFHMSELDDDIIALMARRVYDVAGTT-RGIKVYLNNERLP 301

Query: 264  VKSFAEYVDMYPKS----VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
            V+ F +YV++  +         HE VN+RWE+C+TLSE  FQQ+SFVN IAT KGGTHV+
Sbjct: 302  VRHFKDYVNLVLRDQNVDTKVVHEVVNDRWEVCMTLSENGFQQMSFVNSIATTKGGTHVN 361

Query: 320  YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
            YVA+Q+ + +++ + +KNK A VK H VKNH+W+F+N LI+NP+FDSQTKE +T R   F
Sbjct: 362  YVADQIVSGLLSTIKRKNKGAAVKPHQVKNHMWLFINCLIENPSFDSQTKENMTRRSKDF 421

Query: 380  GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK-NDGTKTEDVRGISKLEDANLA 438
            GS   LS++FLK +   +GIV+ +L+WA  K    L K + G+K   + GI KL+DAN A
Sbjct: 422  GSNPVLSDKFLKNI-KDTGIVDAVLNWAKLKSQAQLSKASSGSKKCKISGIPKLDDANEA 480

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            GGRNS +CTLILTEGDSAKALA++GL V+GRD +GVFPLRGKLLNVREAS  Q+++N+E+
Sbjct: 481  GGRNSSKCTLILTEGDSAKALAVSGLGVLGRDYYGVFPLRGKLLNVREASHKQIMDNAEV 540

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
             NI KI+GLK G EY   K LRYG LMIMTDQ                            
Sbjct: 541  KNIAKIMGLKFGHEYTTTKQLRYGRLMIMTDQ---------------------------- 572

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKE 618
            D DGSHIKGLLINFIH FWPSLLK+P FLVEF+TPIVK T K  + +SF+++P YE W E
Sbjct: 573  DQDGSHIKGLLINFIHHFWPSLLKMPDFLVEFVTPIVKCT-KGKQEVSFFTIPQYETWAE 631

Query: 619  SLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIE 678
               GN   W IKYYKGLGTST +E KEYF ++  H+  F +E D+D E I +AFSKK +E
Sbjct: 632  Q-QGNLKGWRIKYYKGLGTSTPQEAKEYFSHMDDHQIPFSYEGDKDFEDIVMAFSKKHVE 690

Query: 679  ARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 738
            ARK+WL  F PG +LD     I YSDF+NKELILFSMAD  RSIPS++DGLKPGQRK+LF
Sbjct: 691  ARKQWLKNFVPGTYLDHATDAICYSDFINKELILFSMADNVRSIPSIMDGLKPGQRKVLF 750

Query: 739  CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFG 798
              FKR    E KVAQ +GYVSEHSAYHHGE SLA TI+GMAQ FVGSNN+NLL P GQFG
Sbjct: 751  SCFKRKLKDEIKVAQLAGYVSEHSAYHHGEMSLAGTIVGMAQRFVGSNNLNLLLPIGQFG 810

Query: 799  TRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVN 858
            TR  GGKDAAS+RYIFT LSP+ R +F   DD LL++L +DGQ IEP +Y PI+P VLVN
Sbjct: 811  TRLAGGKDAASSRYIFTSLSPLARKIFHLADDALLNHLEDDGQTIEPEFYAPILPMVLVN 870

Query: 859  GSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTY 918
            GS+GIGTGWSS +PNYNPRD+V  +  ++ G+  + +HPWY GF G I      +    Y
Sbjct: 871  GSDGIGTGWSSSVPNYNPRDLVNALIAMIEGQEPDELHPWYAGFTGEITPKGKDK----Y 926

Query: 919  TVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQYSDDTTVDF 975
             V G +++++ETT+ I ELPIR WTQ Y+EFLE +   +      I  F QY  DTTV F
Sbjct: 927  AVRGTLKKLDETTIEISELPIRTWTQPYKEFLEGLAADDGKKPPQILEFSQYHTDTTVRF 986

Query: 976  EVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLE 1035
             V ++ E M   + +GL K FKL  +ISTSNM LFD +G IKKY+  ++IL +FF +RL 
Sbjct: 987  VVSMTPEQMQAAETKGLYKVFKLEGSISTSNMTLFDPQGRIKKYEGVQEILRDFFDVRLR 1046

Query: 1036 FYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKN 1095
             Y+KRK +  + +  E  K++NKVRFIL V++G +V++NRK+ D+L ELR KGF  FPK 
Sbjct: 1047 LYQKRKSLLADCMTSEYKKMDNKVRFILDVISGSLVISNRKKADILQELRAKGFAAFPKP 1106

Query: 1096 SKSIEAVVAG-----------ATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
                 A   G           ++DE E  EE+          D+DYLLSM +  LT+E+V
Sbjct: 1107 KGKKGAKTVGDLDDDAAGAPPSSDEDEALEESAS--------DFDYLLSMPMWNLTMERV 1158

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
              L  +R+    E++ L + TP+ LW +DL A 
Sbjct: 1159 DKLTEERNGTEAELNALLEKTPQDLWKEDLTAF 1191


>gi|403158494|ref|XP_003307791.2| DNA topoisomerase II [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|375163841|gb|EFP74785.2| DNA topoisomerase II [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1613

 Score = 1281 bits (3316), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 649/1217 (53%), Positives = 831/1217 (68%), Gaps = 80/1217 (6%)

Query: 8    PLTTSNNANVVGPT-APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK 66
            P TT+N     GP  +  KT  E YQK SQLEH+L RPDTYIGS+E   Q +WI+++E K
Sbjct: 92   PPTTTN-----GPAGSKKKTASETYQKLSQLEHVLKRPDTYIGSVEAIRQFMWIFDKEKK 146

Query: 67   TMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE 126
            TM+++ IS+VPGLYKI DEILVNAADNKQRD  MD +KV ID E ++ISV N+G G+P+E
Sbjct: 147  TMVNKEISFVPGLYKIVDEILVNAADNKQRDDSMDTLKVTIDSEKNIISVMNNGKGIPIE 206

Query: 127  IHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLK 186
            IH+ E +Y+PELIFGHLL  SN+DD  KKTTGGRNGYGAKL NI+STEFI+E AD +  K
Sbjct: 207  IHETEQIYIPELIFGHLLAGSNFDDEEKKTTGGRNGYGAKLANIYSTEFIVEAADKQTAK 266

Query: 187  KYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNM---THLEDDVVALMKKRVV 243
            KYKQ+F NNM  K +P I+  K+G+ +TK+SFKPDL KFN+     L  D+ AL+ KRV 
Sbjct: 267  KYKQIFKNNMSVKEKPKITDNKKGEEYTKISFKPDLVKFNLPAENGLAGDMEALISKRVY 326

Query: 244  DLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR----------------------- 280
            D+AG L ++VKV LN  R+ +  F +YV+MY   V                         
Sbjct: 327  DMAGTL-RNVKVWLNDERIKLTGFKKYVEMYTSGVNEAIKGSAAKALEAPGSPGNGATKT 385

Query: 281  --FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK 338
               +E   +RWEI    S+GQFQQVSF N IAT KGGTHV+++  Q+   ++  VNKK  
Sbjct: 386  PIIYEECGKRWEIAFAPSDGQFQQVSFCNSIATTKGGTHVEHIVKQLVEKIIESVNKKKA 445

Query: 339  NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSG 398
               +K + V+NHLWVFVN LI+NP FDSQTKE +TL  S FGSKC ++EEF+KKV  KSG
Sbjct: 446  KLTLKPYQVRNHLWVFVNCLIENPTFDSQTKENMTLGMSKFGSKCVMTEEFMKKVM-KSG 504

Query: 399  IVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKA 458
            ++++++ +A FK+   LKK DG+K   + GI KLEDAN AG R +  CTLILTEGDSAK+
Sbjct: 505  VIDSVMDFAKFKEEAALKKTDGSKRSRITGIVKLEDANNAGTRKAADCTLILTEGDSAKS 564

Query: 459  LAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKS 518
            LA+AGLSV+GRD +GVFPLRGKLLNVREAS  Q+LNN+EI +IK+I+GL+QG +Y +  S
Sbjct: 565  LAVAGLSVIGRDNYGVFPLRGKLLNVREASGAQLLNNAEIQHIKQIMGLQQGKKYASRDS 624

Query: 519  LRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWP 578
            LRYG LMIMTDQ                            DHDGSHIKGL+INF+  F+P
Sbjct: 625  LRYGSLMIMTDQ----------------------------DHDGSHIKGLIINFLDYFFP 656

Query: 579  SLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTS 638
            SLL+IP FLVEFITPIVK T K  + LSF++MP++E WKE    +   W+ KYYKGLGTS
Sbjct: 657  SLLEIPGFLVEFITPIVKVTRKKEE-LSFFTMPEFEKWKEE-NDDGRGWTSKYYKGLGTS 714

Query: 639  TSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEK 698
             +K+ K+YF  ++ H+  F    + D   I++AF+KKK + RK+WL  FEPG HLDQ   
Sbjct: 715  DAKDAKKYFSRMSSHRIKFAPTQENDRHLIDMAFNKKKADDRKEWLRGFEPGTHLDQNVS 774

Query: 699  YIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYV 758
             I Y++F+NKELILFSMAD  RSIPSMVDG KPGQRK+LF  FKR    E KVAQ  GY 
Sbjct: 775  QITYTEFINKELILFSMADNIRSIPSMVDGFKPGQRKVLFACFKRKLKAEIKVAQLGGYC 834

Query: 759  SEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLS 818
            SEHSAYHHGE SL  TI+G+AQ+FVGSNNIN+L PNGQFGTR  GGKDAASARYIFT + 
Sbjct: 835  SEHSAYHHGEASLTQTIVGLAQNFVGSNNINVLSPNGQFGTRASGGKDAASARYIFTNVE 894

Query: 819  PITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRD 878
             ITR +FP  DD +L+YL +DG QIEP WY+PI+P VLVNGS GIGTGWSS IPNYNP D
Sbjct: 895  KITRVIFPPADDNVLNYLTDDGTQIEPEWYIPILPMVLVNGSSGIGTGWSSDIPNYNPVD 954

Query: 879  IVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELP 938
            IV N+RR L  E MEPMHPW+RGF G I    + EA   Y V G  ++ +E T+ I ELP
Sbjct: 955  IVNNLRRRLANEPMEPMHPWFRGFTGQI----TSEAPGKYKVLGEWDQPDEDTIEITELP 1010

Query: 939  IRRWTQDYREFLESIIDQND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKK 995
            +R W Q Y+E +E+ I+  D   + ++ +R+Y  +TTV F + L+E      K+EG+ K 
Sbjct: 1011 VRVWNQSYKEQIEAWINSTDKIPALVKDYREYHTETTVHFIISLTERGKDAIKKEGIEKV 1070

Query: 996  FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKL 1055
            FKL+  +S +NM  FD  G IKKY TPEQIL++F+ +RL +Y+KRK+  + +L L   +L
Sbjct: 1071 FKLSANLSITNMVCFDPSGKIKKYSTPEQILDDFYDVRLAYYQKRKEYLVNDLTLMYERL 1130

Query: 1056 ENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEE 1115
             N+ RF+L ++  ++VV+NRK+ +++ ELR+  F PFP  +K      AG  D+ +E   
Sbjct: 1131 SNQARFVLMIIEKKLVVSNRKKAEIVAELRKLEFRPFPVKAK---PKTAGDPDQADEEGV 1187

Query: 1116 NPEVVNGVQSI----DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWV 1171
              E V  +++     D+DYLL MAI  LT E+V  LLA+RD   +E+  L + T E LW 
Sbjct: 1188 EEEEVADLKAAGTAGDFDYLLGMAISRLTAEQVAKLLAERDDKEKELQILLEKTAEDLWH 1247

Query: 1172 KDLDALDMQLDELDKSD 1188
             DLD  + +   +  SD
Sbjct: 1248 ADLDLFEQEWRRIMTSD 1264


>gi|428169756|gb|EKX38687.1| hypothetical protein GUITHDRAFT_158481 [Guillardia theta CCMP2712]
          Length = 1343

 Score = 1276 bits (3301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 644/1179 (54%), Positives = 848/1179 (71%), Gaps = 51/1179 (4%)

Query: 16   NVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISY 75
            NV   +  +KT+EE YQK +QLEH+LLRPDTYIGS E H   LW+++EE   M  R ++Y
Sbjct: 13   NVSTTSKKSKTVEETYQKLTQLEHVLLRPDTYIGSTEMHRTKLWVFDEEI-GMNQREVTY 71

Query: 76   VPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYV 135
            VPGL+KIFDEILVNAADNKQRD  MD +KVVID E   ISV+N+G G+PVE+H+EE  +V
Sbjct: 72   VPGLFKIFDEILVNAADNKQRDKTMDTLKVVIDPEESSISVYNNGCGIPVEMHKEENCWV 131

Query: 136  PELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRL-KKYKQVFTN 194
            PELIFGHLLTSSNY+D  KKTTGGRNGYGAKL NIFSTEF +ETADG R  +KYKQ +T+
Sbjct: 132  PELIFGHLLTSSNYNDKEKKTTGGRNGYGAKLANIFSTEFTVETADGSRSGRKYKQTWTD 191

Query: 195  NMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVK 254
            NM  K++  + +CKE DNWT ++FKPDL+KF M HL+ D VALMKKRV D+AG +   VK
Sbjct: 192  NMQNKTKATVKECKESDNWTCITFKPDLSKFGMVHLDVDTVALMKKRVYDMAGTI-PGVK 250

Query: 255  VELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFV 306
            V L   R+ +K+F +Y  +Y  S            H + N+RWE+ +  S+GQFQQVSFV
Sbjct: 251  VFLKDQRIKIKTFEDYCKLYLSSSSVLLEGEAKYVHYKPNDRWEMVIAASDGQFQQVSFV 310

Query: 307  NGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDS 366
            N IAT +GG+HV++VA+Q+       + KK+K   +K   +K H+W+F+N+LI+NPAFDS
Sbjct: 311  NNIATTRGGSHVNHVADQLVQMFSDHLGKKHKGLKLKPFQIKGHMWIFLNSLIENPAFDS 370

Query: 367  QTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV 426
            QTKETLTL+ S+FGSK E  ++F KK+   + I++ +LS+   KQ KD+KK DG KT  +
Sbjct: 371  QTKETLTLKPSAFGSKAEFDDKFFKKMLNGTKIIDGILSFGQEKQEKDMKKTDGKKTGRI 430

Query: 427  RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
             GI KLEDAN AG +++  CTLILTEGDSAKALA++GL+VVGR+R+GVFPLRGK+ N R+
Sbjct: 431  VGIPKLEDANDAGTKHAADCTLILTEGDSAKALAVSGLAVVGRNRYGVFPLRGKVANPRD 490

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEY-NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
            A+  Q++ N EI N+K ILGL+QG +Y N  + LRYGH+MIM DQ               
Sbjct: 491  ANHEQIMKNEEIKNLKTILGLQQGNKYENGPQGLRYGHVMIMADQ--------------- 535

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV- 604
                         D DGSHIKGLLIN  H +WP+LL+ P FL EF TPIVKA  K G   
Sbjct: 536  -------------DPDGSHIKGLLINLFHYYWPNLLRHPGFLQEFATPIVKAKKKGGGKN 582

Query: 605  -LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
             ++F+++ +YE W+E +G     W+IKYYKGLGTS+S+E KEYF N+ LH+ DF WE  +
Sbjct: 583  EIAFFTLQEYEEWREQVGDGLGGWTIKYYKGLGTSSSQEAKEYFSNLPLHQMDFAWEGAE 642

Query: 664  DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIP 723
            DGE I++ FSKK+ + RK+WLL++E    +D     + YSDF+NKELI FSM D  RSIP
Sbjct: 643  DGEIIDMVFSKKRADDRKQWLLRYEEDLFVDHNGSEVTYSDFINKELIHFSMMDNMRSIP 702

Query: 724  SMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFV 783
            S+VDG KPGQRKIL+  FKR    E KVAQ +GYV+EHSAYHHGEQSLA  I+GMAQ+FV
Sbjct: 703  SLVDGWKPGQRKILYACFKRKLKAEIKVAQLAGYVAEHSAYHHGEQSLAMAIVGMAQNFV 762

Query: 784  GSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQI 843
            GSNN+N+L P+GQFGTR QGG DAAS RYIFT L PITRFLF + DD +L YLN+DGQ I
Sbjct: 763  GSNNVNVLVPSGQFGTRLQGGADAASPRYIFTYLHPITRFLFHEADDAILKYLNDDGQSI 822

Query: 844  EPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFG 903
            EP +Y+PI+PTVLVNG+ GIGTGWS+ +P YNPRD+V+N++RLL  E+MEPMHPW+RGF 
Sbjct: 823  EPQFYVPILPTVLVNGAHGIGTGWSTDVPCYNPRDVVSNLKRLLRQEVMEPMHPWFRGFQ 882

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID----QNDS 959
            G++E   SK+  V+YT+ G  E+V+ETTL I ELP+ +WTQ Y+EFLE+++D    + + 
Sbjct: 883  GSVELNVSKKGEVSYTLVGKWEKVDETTLVINELPVGKWTQQYKEFLETLMDTEGGKKEP 942

Query: 960  FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKY 1019
            FI+G+R+Y  DTTV FEV ++E+ M   ++ G+ KKF+L+ +++ SNMHLF++ G I++Y
Sbjct: 943  FIKGYREYHTDTTVYFEVSMTEKRMEEAEEVGIAKKFQLSRSLAISNMHLFNADGQIQRY 1002

Query: 1020 DTPEQILEEFFHIRLEFYEKRKKVQLEN-LELELLKLENKVRFILGVVNGEIVVNNRKRT 1078
            D+PEQI+ EF+ +R+E Y +RK+ QLE  L  +L  L+NK RFI  V+ G + VNNRK+T
Sbjct: 1003 DSPEQIMREFYGVRMEHYRQRKE-QLEGELGKQLKVLDNKCRFIKEVIAGTLKVNNRKKT 1061

Query: 1079 DLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGT 1138
            +++ +L  +G+ P  K  K  +    G   E E  E+  +   G  S  YDYLL+M I +
Sbjct: 1062 EIVQDLSARGYMPLYKEGK--KKAAEGEEQEGEAQEQEQQEGKG-SSGGYDYLLNMPILS 1118

Query: 1139 LTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            LTLE+V+ L  +RD    E+++L K TP  LW +DLD++
Sbjct: 1119 LTLERVKHLQEERDGKANELEELNKLTPADLWERDLDSI 1157


>gi|308810347|ref|XP_003082482.1| putative DNA topoisomerase II (ISS) [Ostreococcus tauri]
 gi|116060951|emb|CAL56339.1| putative DNA topoisomerase II (ISS) [Ostreococcus tauri]
          Length = 1099

 Score = 1275 bits (3299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1060 (58%), Positives = 784/1060 (73%), Gaps = 46/1060 (4%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+EE+YQKK+QLEHILLRPDTY+GS E+  +  W+Y++ +K+++HR +S+VPGLYKIFD
Sbjct: 50   KTVEEIYQKKTQLEHILLRPDTYVGSCERAEEKAWVYDDATKSLVHRQVSFVPGLYKIFD 109

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNA DNK RDPKM  ++V ID E  +I V+N G+G+PVE+H+EEGVYVPELIFGHLL
Sbjct: 110  EILVNATDNKVRDPKMKELRVDIDVEQGIIRVYNDGNGIPVEMHKEEGVYVPELIFGHLL 169

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDDN KK  GGRNGYGAKL NIFSTEFIIET DG R K+Y+QVF NNM  K EP +
Sbjct: 170  TSSNYDDNEKKVVGGRNGYGAKLANIFSTEFIIETCDGSREKRYRQVFNNNMSVKGEPVV 229

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHL-EDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            +KCK+ +NWT V+FKPD AKF M  L  +DV ALM KRV D AG +GK+  + LNG ++ 
Sbjct: 230  TKCKKSENWTCVTFKPDFAKFGMESLVNEDVAALMCKRVYDAAGNIGKNTSIYLNGEKLA 289

Query: 264  VKSFAEYVDMYPKS---VTRFHERVNERWEICVTLSEGQ-FQQVSFVNGIATIKGGTHVD 319
            +K F +YV MY  S     +  +   +RW++CV++S+ Q FQQ SFVNGI T+KGGTHV+
Sbjct: 290  IKGFNDYVSMYLNSQATAPKIFDLSTDRWQVCVSISDSQQFQQCSFVNGICTMKGGTHVN 349

Query: 320  YVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
             VA+Q++  ++  + KK K   N+KA  VKNHLWVFVNALI+NPAFDSQTKETL  R + 
Sbjct: 350  NVADQISQKLLEKIQKKEKTCKNLKAFQVKNHLWVFVNALIENPAFDSQTKETLITRPNK 409

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLA 438
            FGS    S+  +KK+   SG+VE ++SWA FKQSK+LKK DG K   + GI KL+DAN A
Sbjct: 410  FGSSYSPSDSIIKKLM-DSGVVENIMSWAQFKQSKELKKTDGAKRSRLTGIPKLDDANDA 468

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            GGRNSE CTLILTEGDSAKALA++GLSVVGRD++GVFPLRGKLLNVR+AS +Q+ NN+EI
Sbjct: 469  GGRNSESCTLILTEGDSAKALAVSGLSVVGRDKYGVFPLRGKLLNVRDASHDQIKNNAEI 528

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
             NIK+ILGL+ G EY++ KSLRYG LMIMTDQ                            
Sbjct: 529  NNIKQILGLQHGKEYDSAKSLRYGKLMIMTDQ---------------------------- 560

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT-NKNGKVLSFYSMPDYEAWK 617
            DHDGSHIKGLLINF+H+ +PSLLKIP FL+EFITPI+KAT  K  KV  FY++P+YE WK
Sbjct: 561  DHDGSHIKGLLINFLHAHFPSLLKIPGFLLEFITPIIKATKGKQSKV--FYTLPEYETWK 618

Query: 618  ESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
            E+  G+A  WSIKYYKGLGTST+ E KEYF ++  H+K+F+WE D DG+ I+++FSKK++
Sbjct: 619  EANQGSAG-WSIKYYKGLGTSTANEAKEYFASLDHHRKNFIWESDGDGDLIDMSFSKKRV 677

Query: 678  EARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKIL 737
            E RK WL  +EPG  LD   + I+Y +F+NKELILFS ADL RSIPSMVDG KP QRK+L
Sbjct: 678  EDRKAWLNAYEPGTFLDMSGEAIRYDEFINKELILFSRADLLRSIPSMVDGFKPSQRKVL 737

Query: 738  FCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQF 797
            F  FKR    + KVAQ SGYVSEHSAYHHGE SLA TI+ +AQDFVGSNNINLL P+GQF
Sbjct: 738  FSCFKRKLKSDIKVAQLSGYVSEHSAYHHGEASLAMTIVNLAQDFVGSNNINLLVPSGQF 797

Query: 798  GTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLV 857
            GTR QGGKD AS RYIFTRL  I R +FP+ DD LL+YL+EDGQ+IEP +Y P++P VLV
Sbjct: 798  GTRLQGGKDHASPRYIFTRLHEICRAIFPECDDALLNYLDEDGQRIEPDFYYPVLPLVLV 857

Query: 858  NGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVT 917
            NG+EGIGTGWS+ IPN+NPRDI++N++ +L GE    MHPWYR F G+I +   K     
Sbjct: 858  NGAEGIGTGWSTSIPNFNPRDIISNIKLVLEGEEARQMHPWYRNFNGSIVEEIVK-GDSR 916

Query: 918  YTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII----DQNDSFIRGFRQYSDDTTV 973
            YTVTG     +E TL I ELP+R WT DY++FLE ++         FI  +++Y  DTTV
Sbjct: 917  YTVTGSYIIRDECTLEITELPLRSWTTDYKDFLEDMLAPKTKNEKPFITDYKEYHTDTTV 976

Query: 974  DFEVFLSEESMMRTKQE--GLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFH 1031
             F + +  E++   +    G+ KKFKL+T +S SNMHLF+  G I KY +P  +L+ F  
Sbjct: 977  HFVITMPPENLAAAQSAPGGIEKKFKLSTKVSISNMHLFNEHGAITKYASPIDVLQAFIP 1036

Query: 1032 IRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIV 1071
            +RL+ Y +R+ + +   E +L +L NK+RFIL VV+G +V
Sbjct: 1037 LRLKAYAQRRDMLIRLAESQLKRLSNKMRFILAVVDGSLV 1076


>gi|452825658|gb|EME32653.1| DNA topoisomerase II [Galdieria sulphuraria]
          Length = 1396

 Score = 1274 bits (3297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1175 (53%), Positives = 841/1175 (71%), Gaps = 59/1175 (5%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T+  KT+E+ YQK +  EH+LLRPDTYIGS+E+ TQ LW+Y+ + + M  R +S+VP LY
Sbjct: 4    TSSYKTVEDTYQKLTPREHVLLRPDTYIGSVERTTQTLWVYDRKDQRMSFREVSFVPALY 63

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAAD+KQRDP M+ ++V I +E + IS++N+G G+PVEIH++E +YVPE+IF
Sbjct: 64   KIFDEILVNAADHKQRDPSMNTIRVDIHKEDNKISIYNNGKGIPVEIHKKENIYVPEMIF 123

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            GHLLTSSNYDD+ KK  GGRNGYGAKLTNIFS  FI+ETAD +R   Y+Q F+NNM  + 
Sbjct: 124  GHLLTSSNYDDSEKKVVGGRNGYGAKLTNIFSKSFIVETADSQRGLTYRQEFSNNMSSRK 183

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
            +P I   K+ D+WTK++F PDL KF+MTHL++D++AL +KRV D+AGC   +VKV  NG 
Sbjct: 184  DPKIMSNKK-DDWTKITFVPDLEKFSMTHLDEDILALFQKRVFDVAGC-NPTVKVYFNGE 241

Query: 261  RVPVKSFAEYVDMY---PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             +P+KSF +Y ++Y      V R +E    RWE+ +++SEGQF QVSFVN I T+KGGTH
Sbjct: 242  HLPIKSFRDYCELYLIDKADVPRIYECNGSRWEVMLSVSEGQFTQVSFVNSIWTMKGGTH 301

Query: 318  VDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQS 377
            V+++ +Q+ + V   + KK+K   +K   +KNHLWVFV  LI+NPAFDSQTKE +T R +
Sbjct: 302  VNHIVDQIISKVNEHIEKKHKGLKLKPFQIKNHLWVFVKCLIENPAFDSQTKENMTSRPN 361

Query: 378  SFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANL 437
            +FGS C LSEEF+KKV  KS I+E +LS+A  KQ+ +LKK DG K + + GI KL+DAN 
Sbjct: 362  TFGSSCPLSEEFMKKV-MKSSILENVLSFAKMKQTSELKKTDGGKAKKILGIPKLDDANY 420

Query: 438  AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
            AG + S  CTLILTEGDSAKALA++GLSVVGRD +GVFPLRGKLLNVREAS  Q++ N+E
Sbjct: 421  AGTKESFYCTLILTEGDSAKALAVSGLSVVGRDYYGVFPLRGKLLNVREASHKQIMENAE 480

Query: 498  IGNIKKILGLKQGVEYNN--VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFM 555
            I N+KKILGL+ G  Y++  +K+LRYGH++IMTDQ                         
Sbjct: 481  INNLKKILGLQHGKVYDDETIKTLRYGHVLIMTDQ------------------------- 515

Query: 556  LAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEA 615
               D+DGSHIKGLLINF H FWPSLL++  FL EFITPIVKA+ K  +V++F+++P+Y+ 
Sbjct: 516  ---DNDGSHIKGLLINFFHHFWPSLLEVKGFLQEFITPIVKAS-KGNQVVTFFTIPEYKT 571

Query: 616  WKESLGGNA-SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
            W+ SL       W+IKYYKGLGTST+ E KEYF ++ LH  DF+W  + D  AI++AFSK
Sbjct: 572  WRTSLEQETLKGWTIKYYKGLGTSTAAEAKEYFSHLDLHVIDFIWSGEHDMVAIDMAFSK 631

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            ++++ RK+WL   +P  + D     + YS+FVNKELILFS++D  RSIPS++DGLKP QR
Sbjct: 632  QRVQERKEWLADVDPDTYFDHIADDLTYSNFVNKELILFSLSDNARSIPSVIDGLKPSQR 691

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+LF  FK+   ++ KVAQ +GY++E++AYHHGE SL +TI+G+AQ+FVG+ NINLL P+
Sbjct: 692  KVLFGCFKKKLTRDIKVAQLAGYIAENAAYHHGEMSLMATIVGLAQNFVGACNINLLVPS 751

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            GQFGTR QGGKDAASARYIFTRL+PITR+LFP+ DD +L YL EDG  IEP +Y PIIP 
Sbjct: 752  GQFGTRLQGGKDAASARYIFTRLAPITRYLFPEADDAVLHYLEEDGLSIEPNYYCPIIPL 811

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            VLVNG+EGIGTGWS+ +P YNP+D++ N+RRL++G     MHPWYRGF G+I  + S   
Sbjct: 812  VLVNGAEGIGTGWSTNVPCYNPKDVIENIRRLIHGHEPHTMHPWYRGFRGSICFSGSS-- 869

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND-------SFIRGFRQY 967
              TY + G +  V +  +RI ELP++ WT  Y+E+LESI+  ++       SFI+     
Sbjct: 870  --TYDIYGKVYRVRDHLVRITELPLKTWTTPYKEWLESIMLSSEQHKSGETSFIKELFDR 927

Query: 968  SDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILE 1027
            S +  VDF + L EE+  + + +G  KKFKL +T+STSNM LF+++G I+KYD P  +L+
Sbjct: 928  STERLVDFLINLHEEAYKQCETQGFHKKFKLGSTLSTSNMVLFNAEGKIQKYDDPIDMLK 987

Query: 1028 EFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK 1087
            EFFHIRL  YE RK+  L+ L +++ KLEN+VRFIL V+ GEI V N KR DL++ L + 
Sbjct: 988  EFFHIRLRLYESRKQYLLQELTVQVEKLENRVRFILQVIQGEIKVANVKRKDLIVTLTKH 1047

Query: 1088 GFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGL 1147
             F     N+      V+   DE EE E + E  +G     YDYLLSM I +LT E++  L
Sbjct: 1048 HFKKIYNNN-----TVSDNKDEEEEKENDSETGSG-----YDYLLSMPIWSLTQERITKL 1097

Query: 1148 LADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
              +RDK  EE+  L +  P  LW++DL+ L+  LD
Sbjct: 1098 TEERDKKIEEMKRLEQTAPSDLWLQDLEKLEQILD 1132


>gi|328862532|gb|EGG11633.1| hypothetical protein MELLADRAFT_46846 [Melampsora larici-populina
            98AG31]
          Length = 1259

 Score = 1273 bits (3293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1197 (53%), Positives = 832/1197 (69%), Gaps = 66/1197 (5%)

Query: 7    LPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK 66
            LP  +S +    GP    K+  + YQK +QLEH+L RPDTYIGS+E   Q +W+Y++E K
Sbjct: 98   LPAKSSTS----GPAPSKKSASQTYQKLTQLEHVLKRPDTYIGSVEAIRQYMWVYDKEKK 153

Query: 67   TMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE 126
             M ++ IS+VPGLYKI DEILVNAADNKQRD KMD +KV ID E +LISV N+G G+P+E
Sbjct: 154  AMANKEISFVPGLYKIVDEILVNAADNKQRDDKMDTLKVTIDPEKNLISVMNNGKGIPIE 213

Query: 127  IHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLK 186
            IH+ EG Y+PELIFGHLL  SN+DD+ KKTTGGRNGYGAKL NI+STEFI+ETA+    K
Sbjct: 214  IHETEGCYIPELIFGHLLAGSNFDDDEKKTTGGRNGYGAKLANIYSTEFIVETAEATTCK 273

Query: 187  KYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNM---THLEDDVVALMKKRVV 243
            KYKQ F NNM  K +P I++ K+GD +TK+SFKPDL KFN+     L  D+ AL+ KRV 
Sbjct: 274  KYKQTFRNNMSVKEKPKITENKKGDQYTKISFKPDLVKFNLPAENGLAGDMEALLSKRVY 333

Query: 244  DLAGCLGKSVKVELNGHRVPVKSFAEYVDMY----------------PKSVTRFHERVNE 287
            D+AG L K+VKV LN  R+ V +F +YV+MY                P   T  +E   +
Sbjct: 334  DMAGTL-KNVKVWLNDERLKVTTFKKYVEMYTNGINEVKIPGSPGAGPPKATILYEECGK 392

Query: 288  RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNV 347
            RWE+  T S+GQFQQ+SF N IAT KGGTHVD+V  Q+   +    NK      +K   V
Sbjct: 393  RWEVAFTPSDGQFQQISFCNSIATTKGGTHVDHVVKQLVEKITEAANKHKAKVKLKPFQV 452

Query: 348  KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
            +NHLWVFVN L++NPAFDSQTKE +TL  S FGSKC +S+EF KKV  KSG++++++ +A
Sbjct: 453  RNHLWVFVNCLVENPAFDSQTKENMTLGVSKFGSKCVMSDEFFKKVM-KSGVIDSVVDFA 511

Query: 408  NFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
              K+   LKK DG+K   + GI KLEDAN AG + + +CTLILTEGDSAK+LA+AGL+V+
Sbjct: 512  KLKEEVALKKTDGSKRSRITGIVKLEDANNAGTKKAAECTLILTEGDSAKSLAVAGLTVI 571

Query: 468  GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
            GRD +GVFPLRGKLLNVREAS  Q+L N+EI +IKKI+GL+QG +Y + +SLRYG LMIM
Sbjct: 572  GRDNYGVFPLRGKLLNVREASGTQLLANAEIQHIKKIMGLQQGKKYTSRESLRYGSLMIM 631

Query: 528  TDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFL 587
            TDQ                            DHDGSHIKGL+INF+  F+PSLL+IP FL
Sbjct: 632  TDQ----------------------------DHDGSHIKGLIINFLDYFFPSLLEIPGFL 663

Query: 588  VEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYF 647
            VEFITPIVK T K  + LSF++MP++E WKE   G    W  KYYKGLGTS +K+ K+YF
Sbjct: 664  VEFITPIVKVTRKKQE-LSFFTMPEFERWKEENNG-GREWKSKYYKGLGTSDAKDAKKYF 721

Query: 648  QNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVN 707
              ++ H+  F      D + I++AF+KKK + RK+WL  FEPG HLD     I Y++F+N
Sbjct: 722  SKMSSHRIKFAPTQPTDRDLIDMAFNKKKADNRKEWLRGFEPGTHLDHNVSQISYTEFIN 781

Query: 708  KELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHG 767
            KELILFSMAD  RSIPSMVDG KPGQRK+LF  FKR    E KVAQ  GY +EHSAYHHG
Sbjct: 782  KELILFSMADNIRSIPSMVDGFKPGQRKVLFACFKRKLKAEIKVAQLGGYCAEHSAYHHG 841

Query: 768  EQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPK 827
            EQSL  TI+ +AQ+FVGSNNIN+L PNGQFGTR  GGKDAASARYIFT +  ITR +FP 
Sbjct: 842  EQSLTQTIVALAQNFVGSNNINVLSPNGQFGTRANGGKDAASARYIFTNIEKITRAIFPP 901

Query: 828  DDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL 887
             DD +L+YLN+DG QIEP WY+P++P VLVNGS GIGTGWSS IPNYNP DIV N+RR L
Sbjct: 902  QDDHVLNYLNDDGAQIEPEWYVPVLPMVLVNGSSGIGTGWSSDIPNYNPMDIVENLRRKL 961

Query: 888  NGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYR 947
            + E +EP++PW+RGF G I    + EA   + VTG   + +E T+ I ELPIR W   Y+
Sbjct: 962  SDEPLEPIYPWFRGFTGHI----TPEAPGKFKVTGEWNQPDEDTVEITELPIRVWNLTYK 1017

Query: 948  EFLESIIDQND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTIST 1004
            E LE+ I   D   + ++ +R+Y  +TTV F + L+++     K++GL K FKLT  +ST
Sbjct: 1018 ELLEAWITSTDKVPALVKDYREYHTETTVHFIIQLTDKGKEAIKKDGLEKVFKLTGNVST 1077

Query: 1005 SNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILG 1064
            +NM  FDS G IKKY TPE+ILE+F+ IRLE+Y+KRK+  +++L     +L N+ RF+L 
Sbjct: 1078 TNMVCFDSFGKIKKYSTPEEILEDFYDIRLEYYQKRKEFLVQDLTTTYERLSNQARFVLM 1137

Query: 1065 VVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQ 1124
            ++  ++++NNRK+ +++++LR+  F PFP+  K      AG  D+  E ++  E  + V+
Sbjct: 1138 IIEKKLIINNRKKAEVVIDLRKLDFRPFPRKPK---PKTAGDPDQVGEDDQEEEEHDEVE 1194

Query: 1125 SI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQ 1180
            S  DYDYLLSMAI  LT E+V  LLA+RD+  +++  L   T + LW  DLDA + +
Sbjct: 1195 SAGDYDYLLSMAISRLTAEQVAKLLAERDEKEKDLQILLGKTAKDLWHVDLDAFEAE 1251


>gi|430814552|emb|CCJ28239.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 1482

 Score = 1273 bits (3293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 655/1162 (56%), Positives = 837/1162 (72%), Gaps = 55/1162 (4%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT  E+YQK SQLEHIL RPDTYIGSIE  +Q +W+Y++ +  M +R +S VPGLYKIFD
Sbjct: 83   KTTSEIYQKLSQLEHILKRPDTYIGSIEFTSQHIWVYDDNTNAMKYRQVSIVPGLYKIFD 142

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP MD +KV   +E ++IS++N+G G+P+EIH +E V++PELIFGHLL
Sbjct: 143  EILVNAADNKIRDPNMDTIKVEFSREKNVISIYNNGRGIPIEIHNKEKVWIPELIFGHLL 202

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD  KK TGGRNGYGAKL NIFSTEFI+ETAD    K YKQVF NNM KK +P I
Sbjct: 203  TSSNYDDEEKKVTGGRNGYGAKLCNIFSTEFIVETADRATKKTYKQVFLNNMTKKKDPVI 262

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
             + K+ + +T+++FKPDL +F M  ++ D+ ++ K+RV DLAG + K+VKV LNG R+ V
Sbjct: 263  KENKKDEEYTRITFKPDLERFGMKEIDSDLESVFKRRVYDLAGSV-KNVKVFLNGERIKV 321

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            KSF +Y++MY  S         T  HE VN+RWE+  T+S+GQF QVSFVN IAT +GGT
Sbjct: 322  KSFKQYIEMYLNSDDSENNLKPTIIHEVVNDRWEVAFTVSDGQFNQVSFVNSIATTRGGT 381

Query: 317  HVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            HV+YV++Q+   ++  V KKNKN  +K   VKNH+WVF+N+LI+NP+FDSQTKETLTL+Q
Sbjct: 382  HVNYVSDQIVLKLIEAVKKKNKNIPIKPFQVKNHIWVFINSLIENPSFDSQTKETLTLKQ 441

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            ++FGSKC LS++F+KKV  K+ I+E +L  A  K  + +KK DG+K   + G+ KLEDAN
Sbjct: 442  TAFGSKCILSDDFIKKV-LKTPIMEKILDTAQKKADQLMKKTDGSKKMRITGLPKLEDAN 500

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG +   +CTLILTEGDSAK+LAM+G+ VVGRD FGV+PLRGKLLNVREAS  Q+  N+
Sbjct: 501  KAGTKEGHKCTLILTEGDSAKSLAMSGIGVVGRDYFGVYPLRGKLLNVREASHEQISKNA 560

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI  IK+I+GL+    Y +   LRYGHLMIMTDQ                          
Sbjct: 561  EINAIKQIMGLQHKKVYTSTSELRYGHLMIMTDQ-------------------------- 594

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAW 616
              DHDGSHIKGL+IN++ S +PSLL+IP FL+EFITPIVKAT K  +  +F+++P+YE W
Sbjct: 595  --DHDGSHIKGLIINYLESSFPSLLEIPGFLIEFITPIVKAT-KGTQEKTFFTIPEYEYW 651

Query: 617  KESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKK 676
            KES+  NA  W IKYYKGLGTS   + K+YF ++  H K+F    + D E I++AFSKKK
Sbjct: 652  KESVD-NAKGWKIKYYKGLGTSYGNDVKKYFSDLDTHLKEFHSIREGDKELIDMAFSKKK 710

Query: 677  IEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKI 736
             + RK+WL  F+PG ++D     I  SDF+NKELILFSMAD  RSIPS+VDGLKPGQRK+
Sbjct: 711  ADERKEWLRLFKPGTYMDHTLDKIPISDFINKELILFSMADNIRSIPSVVDGLKPGQRKV 770

Query: 737  LFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQ 796
            +F  FKR    E KVAQ SGY+SEH+AYHHGEQSL  TI+G+AQ FVGSNNINL++PNGQ
Sbjct: 771  IFGCFKRKLKSEIKVAQLSGYISEHTAYHHGEQSLTQTIIGLAQTFVGSNNINLMKPNGQ 830

Query: 797  FGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVL 856
            FGTR QGGKDAAS RYIFT LSP+TR +F + DD LL+YLNEDGQ IEP WY+PIIP +L
Sbjct: 831  FGTRLQGGKDAASPRYIFTELSPLTRKIFVESDDALLNYLNEDGQSIEPLWYVPIIPLIL 890

Query: 857  VNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGV 916
            VNG EGIGTGWSSYIPN+NP D+V N+RR++NGE +EPMHPWYRGF G+IEK   K    
Sbjct: 891  VNGCEGIGTGWSSYIPNFNPIDLVNNIRRMMNGEKLEPMHPWYRGFNGSIEKQGDK---- 946

Query: 917  TYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLE-SII--DQNDSFIRGFRQYSDDTTV 973
             Y ++G I ++++TT+ I ELPIR WTQD +EFLE S++  D+   FI+ + +Y  DT V
Sbjct: 947  -YKISGCIRQIDDTTVEITELPIRFWTQDMKEFLELSVVGSDKVQPFIKDYSEYHTDTVV 1005

Query: 974  DFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIR 1033
             F + L+E+ M  +  +GL +KFKL    + +NM  FDS G IKKY++ E+IL EF++IR
Sbjct: 1006 HFIIKLTEKGMAESLAQGLEEKFKLIKIQNMTNMVAFDSSGRIKKYNSVEEILLEFYNIR 1065

Query: 1034 LEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP 1093
            L+FY+KRK   +  LE +  KL N+VRF+  V+N E    NRKR DLL +L+ KGF PFP
Sbjct: 1066 LQFYQKRKDYLVNELESQYNKLSNQVRFVKMVINKEQDFLNRKRKDLLDDLKLKGFIPFP 1125

Query: 1094 KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDK 1153
            KN       V  AT+ +    EN    +   +  YDYLLSM + +LT EKV+ LL D+  
Sbjct: 1126 KNK---HISVDNATETSNNLAEN----DDDDATGYDYLLSMPLWSLTAEKVEKLLKDKLD 1178

Query: 1154 LNEEVDDLRKATPESLWVKDLD 1175
               E++ L K T + LW KDLD
Sbjct: 1179 KENELESLLKLTVKDLWNKDLD 1200


>gi|342319562|gb|EGU11509.1| DNA topoisomerase 2 [Rhodotorula glutinis ATCC 204091]
          Length = 1591

 Score = 1265 bits (3274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 648/1237 (52%), Positives = 843/1237 (68%), Gaps = 103/1237 (8%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E Y K +QLEH+L RPDTYIGSIE  TQ +W+++ ES+ M+ R  ++ PG YKIFDEILV
Sbjct: 139  ETYVKLTQLEHVLKRPDTYIGSIEPVTQPMWVWDRESEKMVFRQTTFTPGFYKIFDEILV 198

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNK RDP M  ++V ID+E   I+V N G G+P+E H++EG+Y+PELIFG+LLTSSN
Sbjct: 199  NAADNKVRDPTMSEIRVTIDEEKRTITVKNDGKGIPIEKHKKEGIYIPELIFGNLLTSSN 258

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD+  KTTGGRNGYGAKL NI+STEFI+ETADG+   KY+QVF++NM +K  P I+  K
Sbjct: 259  YDDDEAKTTGGRNGYGAKLANIYSTEFIVETADGE--SKYRQVFSDNMSRKGAPKITSVK 316

Query: 209  -EGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
             +G+ +T ++F PDL +FNM    + D +AL+ KRV D+AG + K VKV LNG  +  K 
Sbjct: 317  KDGEQYTLITFTPDLERFNMHDGFDRDTLALLHKRVWDMAGIVPK-VKVYLNGKVLRCKD 375

Query: 267  FAEYV-----------------------------------------DMYPKS------VT 279
            F  YV                                         DM P +       T
Sbjct: 376  FKAYVEKFLAGTNEITGAAAAKKKGKKGEAPVTAAAALFGDEEEDADMRPAADADAAKQT 435

Query: 280  RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN 339
               E+VN+RW++   +S+GQFQQVS+ N IAT KGG+HV YVA+Q+   ++ +V KK+K 
Sbjct: 436  VVFEKVNDRWDVAFAVSDGQFQQVSYCNAIATTKGGSHVTYVADQIVQGLVDLVKKKHKG 495

Query: 340  ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGI 399
              VK   +KNH+ +FVN  IDNP+FDSQTKE +TL    FGSKC+LS+EFLKKV AKSG+
Sbjct: 496  VQVKPFQIKNHIALFVNCKIDNPSFDSQTKENMTLGVKKFGSKCQLSDEFLKKV-AKSGV 554

Query: 400  VETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKAL 459
            ++ +++WA FKQ + LKK DG+K   + G+ KLEDAN AG RN  +CTLILTEGDSAKAL
Sbjct: 555  IDNIVNWAKFKQDQALKKTDGSKRSRITGLVKLEDANNAGTRNGNKCTLILTEGDSAKAL 614

Query: 460  AMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSL 519
            A++GL+VVGRD +GVFPLRGKLLNVREA+   +L N+EI  IK+I+GL+QG  Y +  SL
Sbjct: 615  AVSGLAVVGRDNYGVFPLRGKLLNVREATGKALLENAEIQAIKQIMGLQQGKTYTSTDSL 674

Query: 520  RYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPS 579
            RYG LMIM DQ                            DHDGSHIKGL+INF+  ++PS
Sbjct: 675  RYGSLMIMADQ----------------------------DHDGSHIKGLIINFLDYWFPS 706

Query: 580  LLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTST 639
            LLK+P+FLVEFITPIVK + K  K +SF+++P+YEAWK     +   W IKY+KGLGTS 
Sbjct: 707  LLKLPNFLVEFITPIVKVS-KGKKEISFFTIPEYEAWKAETD-DGRGWKIKYFKGLGTSD 764

Query: 640  SKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKY 699
            + + K+YF ++  H+  F     +D   I++AF+KKK + RK+WL  F PG ++D     
Sbjct: 765  TNDAKKYFSDMNRHRLPFKELTPEDRALIDMAFNKKKADDRKEWLRGFVPGTYMDHDVDE 824

Query: 700  IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVS 759
            +   DF+NKELILFSMAD  RSIPS+VDG KPGQRK+LF  FKR    E KV Q SGY+S
Sbjct: 825  VPIKDFINKELILFSMADNIRSIPSVVDGFKPGQRKVLFGCFKRKLKNEIKVGQLSGYIS 884

Query: 760  EHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSP 819
            EHSAYHHG+ SL  TI+G+AQ+FVGSNNIN+L PNGQFGTR QGGKDAASARYIFT ++ 
Sbjct: 885  EHSAYHHGDASLQGTIVGLAQNFVGSNNINVLDPNGQFGTRLQGGKDAASARYIFTNVAQ 944

Query: 820  ITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDI 879
            ITR LF   DD +LDYLN+DGQ IEP+WY+PI+P VLVNGS+GIGTGWSS+IPN+NP DI
Sbjct: 945  ITRTLFHPSDDAILDYLNDDGQSIEPSWYIPILPMVLVNGSDGIGTGWSSFIPNFNPSDI 1004

Query: 880  VANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPI 939
            VAN+RR L+GE MEP+HPWYRGF GTIEK A KE    Y  TG I+ ++++T+ I ELPI
Sbjct: 1005 VANLRRKLDGEEMEPIHPWYRGFRGTIEKDA-KEG---YKCTGTIQRIDDSTVEITELPI 1060

Query: 940  RRWTQDYREFLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKF 996
            R WTQ+Y+E LES +   D+  ++ + +++Y  DTTV F V L+       +++GL K F
Sbjct: 1061 RTWTQNYKEMLESWVAGSDKQAAWCKDYKEYHTDTTVHFVVTLTTAGKEAIEKDGLEKVF 1120

Query: 997  KLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLE 1056
            K+T+ ++TSNM  FD  G IKKY T E I+ +F+ +RLEFY KRKK  +  LEL   +L 
Sbjct: 1121 KVTSKLNTSNMVCFDPTGKIKKYATAEDIVSDFYDVRLEFYHKRKKHLVSELELVHDRLS 1180

Query: 1057 NKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEEN 1116
            N+ RFI  +++ ++V++NRKR D++ ELR+KGF PFPK  K   A    A  + +E  E+
Sbjct: 1181 NQARFIKMIIDKQLVLSNRKRADIVAELRKKGFRPFPKVQKMHVAGDVDANGDGDEEVED 1240

Query: 1117 PEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDA 1176
            PE V      DYDYLL+M + +LT EKV+ L+A+RD+ + E+D L K + + LW  DLDA
Sbjct: 1241 PEAVEAGADSDYDYLLNMQLSSLTREKVERLMAERDQRSAELDALLKRSVQDLWRADLDA 1300

Query: 1177 LDMQLDELDKSDARAEEERM-------KIKGNGNGDA 1206
                   ++K DA  EE+R        K K  G G A
Sbjct: 1301 F------MEKWDAMLEEDRANKARSLKKAKSAGKGTA 1331


>gi|328773079|gb|EGF83116.1| hypothetical protein BATDEDRAFT_18312, partial [Batrachochytrium
            dendrobatidis JAM81]
          Length = 1218

 Score = 1263 bits (3268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1183 (53%), Positives = 833/1183 (70%), Gaps = 62/1183 (5%)

Query: 20   PTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGL 79
            P    K+IEE+YQKK+QLEHIL+RPDTYIGS E     LW+++ E   M+HR IS+VPGL
Sbjct: 78   PVKGGKSIEEIYQKKTQLEHILIRPDTYIGSTEFINTPLWVFDGER--MVHRPISFVPGL 135

Query: 80   YKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELI 139
            YKIFDEI+VNAADNK RDP MD +K+ ID+E + ISV+N+G G+P+EIH +E +YVPELI
Sbjct: 136  YKIFDEIIVNAADNKVRDPTMDTIKISIDREKNTISVYNNGRGIPIEIHAKEQIYVPELI 195

Query: 140  FGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
            FGHLLTSSNYDD+ KK TGGRNGYGAKL NIFST F++ETAD +  +K+KQVF+NNM  K
Sbjct: 196  FGHLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTYFMVETADSRSGRKFKQVFSNNMSSK 255

Query: 200  SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
            + P I++  +G+++T+++FKPDL KF MT ++DD  AL+KKR  DLAGC+ + +KV LN 
Sbjct: 256  TTPTITQNNKGEDFTQITFKPDLEKFKMTVIDDDFEALLKKRAYDLAGCV-RGIKVFLNN 314

Query: 260  HRVPVKSFAEYVDMYPKSVTR--------FHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
             R+ +K F +YVD+Y  +V           +E++N+RWEI  T S+GQF QVSF N I T
Sbjct: 315  TRIKIKDFKDYVDLYLDNVNPETGLKPPIVYEKLNDRWEIAYTPSDGQFNQVSFANSICT 374

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
             KGGTHV+ +A+Q+   +M  V KK+K A  +K H  K+H+W+FVN  ++NP FDSQTKE
Sbjct: 375  SKGGTHVNTIADQIVTGLMDQVKKKDKKAVPLKPHQAKSHIWIFVNCQVENPTFDSQTKE 434

Query: 371  TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT-KTEDVRGI 429
            TLTLR S+FGSK  +SEEF+KKV  +SGI++T++ +A FKQ + LKK DG+ K   + GI
Sbjct: 435  TLTLRTSAFGSKTPISEEFMKKV-FRSGIIDTIMKFAKFKQDQLLKKTDGSGKKSRINGI 493

Query: 430  SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS 489
            +KL+DAN AG +N  +CTLILTEGDSAK+LA++GLSVVGRD FGVFPLRGKLLNVREA+ 
Sbjct: 494  TKLDDANNAGTKNGGKCTLILTEGDSAKSLAVSGLSVVGRDNFGVFPLRGKLLNVREATH 553

Query: 490  NQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
             Q+  N+EI  IK+ILGL+ G  Y +  +LRYGHLMIMTDQ                   
Sbjct: 554  AQITGNAEISAIKQILGLQHGKVYEDASTLRYGHLMIMTDQ------------------- 594

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG---KVLS 606
                     DHDGSHIKGL+INF+  FWPSLL IP FL+EFITPIV+AT   G   + +S
Sbjct: 595  ---------DHDGSHIKGLIINFLDHFWPSLLYIPGFLLEFITPIVRATKGKGHNKQEIS 645

Query: 607  FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
            F+++P++E WKE   G    W+ KY+KGLGTST+ + KEYF ++  H K F   DD+  E
Sbjct: 646  FFTIPEFEQWKEVNSG-GRGWTTKYFKGLGTSTTADAKEYFSDMNKHLKPFCRLDDESRE 704

Query: 667  AIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
             I++AF+KKK ++RK+WL +F+PG ++D     I   DF+N+ELILFSMAD  RSIPS V
Sbjct: 705  LIDMAFNKKKADSRKEWLGRFQPGTYMDHSVTEISLPDFINRELILFSMADNARSIPSSV 764

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DG KPGQRKILF  FKRN   E KVAQ +GYV+EHSAYHHGEQSL +TI+ MAQ+F+GSN
Sbjct: 765  DGFKPGQRKILFACFKRNLKSEIKVAQLAGYVAEHSAYHHGEQSLNATIVNMAQNFIGSN 824

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            N+ +L+P GQFGTR QGGKDAAS RYIFT L+P+ R +F   DD LL YL +DGQ IEP 
Sbjct: 825  NLGVLEPLGQFGTRLQGGKDAASPRYIFTNLTPLARTVFHPSDDPLLTYLVDDGQNIEPE 884

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI 906
            WY+P++P +LVNG++GIGTGWSS IPNYNPRDIV  + RL+  E +  +HPWYRGF G I
Sbjct: 885  WYLPVLPMLLVNGADGIGTGWSSSIPNYNPRDIVECLHRLMRHEELFEIHPWYRGFSGKI 944

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII---DQNDSFIRG 963
            E    +E    Y VTG I +++  T+ I ELPIR WTQ Y+E LE+ +   ++  ++I+ 
Sbjct: 945  E----RETPERYKVTGCIRKIDSNTVEITELPIRTWTQSYKEQLEAWLTGTEKQTAWIKD 1000

Query: 964  FRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPE 1023
            +++Y  D+ V F V L++++M   + EGL K+FKL +++S SN+  FD +G I+KYD  +
Sbjct: 1001 YKEYHTDSKVHFIVTLTDQAMSLAESEGLEKRFKLISSVSVSNIVCFDLEGRIRKYDGVQ 1060

Query: 1024 QILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLE 1083
             I+++F+ +RL +Y+KRK   L+ L  E  +LE+KVRF+  ++ G++VV NRKR DLL E
Sbjct: 1061 DIIKDFYELRLSYYQKRKNHMLQTLTFEYERLESKVRFVTEIITGKLVVQNRKRIDLLKE 1120

Query: 1084 LRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID----YDYLLSMAIGTL 1139
            L  + +   PK     E     AT+ +E S++  +    VQ  D    YDYLLSM I  L
Sbjct: 1121 LVTRKYKLIPKKKAGSE-----ATNGSEGSDDANDGDESVQDDDPRQGYDYLLSMPIWNL 1175

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
            T EKVQ L  +     +E+  L   T   LW  DLDA   Q D
Sbjct: 1176 TWEKVQQLQKEMQDREDEIKALIGKTIHDLWRFDLDAFLAQWD 1218


>gi|392596931|gb|EIW86253.1| DNA topoisomerase II [Coniophora puteana RWD-64-598 SS2]
          Length = 1558

 Score = 1255 bits (3247), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1181 (53%), Positives = 824/1181 (69%), Gaps = 59/1181 (4%)

Query: 17   VVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYV 76
            V  P    KT  E Y K +QLEHIL RPD+YIGS+E  +QA+W ++ E+K ++HR + YV
Sbjct: 85   VAAPLRKQKTASETYTKLTQLEHILKRPDSYIGSVESISQAMWTWDSENKRLVHREVKYV 144

Query: 77   PGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVP 136
            PG +KI DEILVNAADNK  D  MD +KV ID E   ISVHN+G G+P+E+H +E +Y+P
Sbjct: 145  PGFFKIVDEILVNAADNKINDATMDTIKVNIDVEEGTISVHNNGKGIPIEMHSKEKMYIP 204

Query: 137  ELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
            ELIFGHLL+SSNYDD+ KK TGGRNG+GAKL NI+S EF I+TAD K  +KYKQ +T+NM
Sbjct: 205  ELIFGHLLSSSNYDDDEKKLTGGRNGFGAKLANIYSHEFTIDTADKKTGQKYKQTWTDNM 264

Query: 197  GKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVE 256
             K  +  I+K    + +TKVSFKPDLA+F M  ++DD ++L+K+RV D+AG + K VKV 
Sbjct: 265  SKVGKAKITKNSRNEEYTKVSFKPDLARFGMDSIDDDALSLLKRRVYDMAGTV-KDVKVF 323

Query: 257  LNGHRVPVKSFAEYVDMYPKSVTR----------------FHERVNERWEICVTLSEGQF 300
            LN  R+ VK+F +Y DMY +S T                  +E++N+RWE+   +SEG F
Sbjct: 324  LNDERLKVKNFKQYCDMYLESATTDAAENSGGAAQVKPTILYEKINDRWEVAFAVSEGSF 383

Query: 301  QQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALID 360
            QQVSF N IATIKGGTHV+ +A+Q+A  ++  + KKNK A+VK   +KNH+W+FVN+LI+
Sbjct: 384  QQVSFANSIATIKGGTHVNLIADQLAKALITDITKKNKAASVKPAQIKNHMWIFVNSLIE 443

Query: 361  NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG 420
            NP FDSQTKETLTL  S FGS+  LSEEF+KKV+ KS IVE +L+WA FK  + +KK DG
Sbjct: 444  NPTFDSQTKETLTLPSSKFGSRPHLSEEFMKKVS-KSAIVEHVLNWAKFKADQQIKKTDG 502

Query: 421  TKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGK 480
            TK   + G++KL DAN AG R +++CTLILTEGDSAKALA+AGL VVGRD FGVFPLRGK
Sbjct: 503  TKRNRLTGLTKLADANNAGTRKADECTLILTEGDSAKALAVAGLGVVGRDNFGVFPLRGK 562

Query: 481  LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLL 540
            LLNVREA  +Q++ N EI NIKKI+GL+   EY+N+ SLRYG LMIM DQ          
Sbjct: 563  LLNVREAKHDQIMKNEEIQNIKKIMGLQHNKEYSNITSLRYGKLMIMADQ---------- 612

Query: 541  WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK 600
                              DHDGSHIKGLLINF+  F+PSLLKIP+FLVEF+TPIV+ + K
Sbjct: 613  ------------------DHDGSHIKGLLINFLDHFYPSLLKIPNFLVEFVTPIVRVS-K 653

Query: 601  NGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE 660
              +   F+++P+YE W E    +A  W  KY+KGLGTS+  + + YF N+  H   F   
Sbjct: 654  GKQRKDFFTIPEYEQWLEDTP-DAHKWDSKYFKGLGTSSDADARYYFGNMRKHMIPFAAT 712

Query: 661  DDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQR 720
             D D E I+LAFSKKK + RK+WL QF PG +LD     I YSDF+N+ELILFSMAD  R
Sbjct: 713  QDGDRELIDLAFSKKKADDRKEWLRQFRPGTYLDHNIDEIPYSDFINRELILFSMADNVR 772

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+ DGLKPGQRK+++  FKR   KE KVAQ  GY+SE +AYHHGEQSL +TI+ +AQ
Sbjct: 773  SIPSIADGLKPGQRKVIWGCFKRKLKKEIKVAQLVGYISEVAAYHHGEQSLMATIVNLAQ 832

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            D+VGSNN+NLL PNGQFGTR+QGGKD ASARYIFT LSP+TR LF   DD LL YL ED 
Sbjct: 833  DYVGSNNVNLLMPNGQFGTRDQGGKDHASARYIFTELSPLTRSLFNPADDPLLTYLKEDN 892

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
              IEP +YMP IP VLVNG++GIGTGWS+ IP +NP DIVAN+RRL+ GE M PM PW+R
Sbjct: 893  DWIEPEFYMPTIPLVLVNGADGIGTGWSTTIPCFNPEDIVANLRRLMVGEEMVPMAPWWR 952

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII-DQNDS 959
            GF G I+KT   +    Y VTGI  +V++TT+ I ELP+  WTQ ++  LE++I D+ + 
Sbjct: 953  GFKGEIKKTGENK----YEVTGIARKVDDTTIEITELPVWEWTQSFKAKLEAMIGDKGEG 1008

Query: 960  FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKY 1019
             ++ ++++ D+  V F V +S + M + + +GL++ FKL+  +ST+NM  F+ +G I KY
Sbjct: 1009 DVKDYKEHHDNVNVHFVVTMSAKGMAKAEAQGLVEFFKLSKPMSTTNMICFNFEGKIAKY 1068

Query: 1020 DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTD 1079
              PE+I+EEF+  RL +Y+KRK      L+ +  KL N+ RF+  +V+ E+ V+NR++ +
Sbjct: 1069 RAPEEIVEEFYPKRLAYYQKRKDHLASELQNQFEKLSNQARFVQMIVDKELSVSNRRKEE 1128

Query: 1080 LLLELRQKGFTPFPKNSKSIEAVVAGA-TDETEESEENPEV--VNGVQSIDYDYLLSMAI 1136
            ++ +LR+  F PFP   K ++A  AG   D  E+ +E+ EV     V S DYDYLL MAI
Sbjct: 1129 IIADLRKHNFRPFP---KVVKAKAAGEFEDVVEQPDEDDEVDRAGHVTSTDYDYLLGMAI 1185

Query: 1137 GTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
             +LT E++Q LL    +  +E+  L + TP  +W +DLD  
Sbjct: 1186 YSLTKERIQKLLQQAGEKEKELLALLERTPIGIWNEDLDGF 1226


>gi|110430606|gb|ABG73430.1| DNA topoisomerase II [Pleurotus ostreatus]
          Length = 1571

 Score = 1254 bits (3245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1179 (52%), Positives = 829/1179 (70%), Gaps = 62/1179 (5%)

Query: 19   GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPG 78
            GP A  KT  E YQK SQLEHIL RPD+YIGSIE  TQA+WI++ ++K M+HR + YVPG
Sbjct: 95   GP-AKKKTASETYQKLSQLEHILKRPDSYIGSIETITQAMWIFDADAKRMVHREVKYVPG 153

Query: 79   LYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
             +KI DEILVNAADNK  DP MDA+KV ID E+  ISV+N+G G+PVE+H  E +Y+PEL
Sbjct: 154  FFKIVDEILVNAADNKVNDPTMDALKVTIDIENCTISVYNNGKGIPVEMHTTEKMYIPEL 213

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            IFGHLL+SSNYDD+ KK TGGRNGYGAKL NI+S EF IETAD    KKY Q +T N+ +
Sbjct: 214  IFGHLLSSSNYDDDEKKLTGGRNGYGAKLANIYSLEFTIETADKVNGKKYSQTWTKNVTQ 273

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
              +  I+K    + +T+V+FKP+L +F MTH++ D   L++KRV D+AG + K VKV LN
Sbjct: 274  VGKAKITKNSRNEEYTRVTFKPELTRFGMTHIDPDTAGLLRKRVYDMAGTV-KDVKVYLN 332

Query: 259  GHRVPVKSFAEYVDMYPKSVTR----------------FHERVNERWEICVTLSEGQFQQ 302
            G R+ +K+F +YV+MY ++ T                  +E+++ RWE+    S+G FQQ
Sbjct: 333  GERLKIKTFKQYVEMYIEAATAGAKENSGGAAQAKPTVIYEQISPRWEVAFATSDGTFQQ 392

Query: 303  VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNP 362
            VSF N IATI+GGTHV+Y+A+Q++  ++A + KKNK A VK   VKNH+W+FVNALI+NP
Sbjct: 393  VSFANSIATIEGGTHVNYIADQLSKSIIAHIAKKNKAATVKPAQVKNHMWIFVNALIENP 452

Query: 363  AFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
             FDSQTKETLTL    FGS+  LSEEF+KKV  KS I++ +L+WA FK  + +KK DG+K
Sbjct: 453  TFDSQTKETLTLPAGKFGSRPALSEEFMKKVQ-KSSIIDQVLNWAKFKADQQIKKTDGSK 511

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
               + G++KL DAN AG +N+E+CTLILTEGDSAK+LA+AGL+VVGRD FGVFPLRGKLL
Sbjct: 512  RNRLTGMAKLSDANNAGTKNAEKCTLILTEGDSAKSLAVAGLAVVGRDNFGVFPLRGKLL 571

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            NVREA  +Q++ N EI NIKKI+GL+   EY NV SLRYG LMIMTDQ            
Sbjct: 572  NVREARHDQIMKNEEIQNIKKIMGLQHNKEYTNVSSLRYGRLMIMTDQ------------ 619

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG 602
                            DHDGSHIKGLLINF+  F+PSLLK+P FLVEF+TPIV+ T  N 
Sbjct: 620  ----------------DHDGSHIKGLLINFLDHFYPSLLKVPEFLVEFVTPIVRVTKGNQ 663

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            +  +F+++P+YE W E    ++  W+ KYYKGLGTS+  + +EYF  +  H   F   +D
Sbjct: 664  RK-NFFTIPEYETWLEETP-DSKKWTAKYYKGLGTSSDADAREYFSQMGKHMIPFATMED 721

Query: 663  QDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
            ++   I+LAFSKKK + RK+W  QF+PG +LD     I ++DF+NKELILFSMAD  RSI
Sbjct: 722  EERALIDLAFSKKKADDRKEWQRQFKPGTYLDHNIDEIPFTDFINKELILFSMADNIRSI 781

Query: 723  PSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDF 782
            PS+ DGLKPGQRK+++  FKR   KE KVAQ  GY+SEH+AYHHGE SL+STI+ +AQ++
Sbjct: 782  PSVADGLKPGQRKVIWGCFKRKLKKEIKVAQLVGYISEHAAYHHGEMSLSSTIVNLAQNY 841

Query: 783  VGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQ 842
            VGSNNINLL PNGQ+GTR+QGGKD AS RYI+T ++P+TR L    DD LL    +D   
Sbjct: 842  VGSNNINLLSPNGQYGTRDQGGKDHASPRYIYTEIAPLTRLLCRPSDDPLLKRQTDDNLL 901

Query: 843  IEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGF 902
            +EP WY+PIIP VLVNG+EGIGTGWS+ IP YNP DIVAN+RRL+NGE + PM PW+RGF
Sbjct: 902  VEPEWYLPIIPMVLVNGAEGIGTGWSTTIPCYNPVDIVANIRRLMNGEEVVPMLPWWRGF 961

Query: 903  GGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII-DQNDSFI 961
             G ++  A  +    Y VTGI +++N+TT+ I ELPI +WTQ+++  LE +I ++ D  +
Sbjct: 962  KGEVKMVAKHK----YDVTGIAKKLNDTTVEITELPIYKWTQNFKAELEGMIGEKGDGVV 1017

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDT 1021
            + +++Y D+  V + V +  + + + +Q+GL++ FKLTT I+TSNM  FD  G +KKYD+
Sbjct: 1018 KDYKEYHDNLNVHYVVTMPAKELEKAEQQGLIEFFKLTTKINTSNMMCFDFDGKMKKYDS 1077

Query: 1022 PEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLL 1081
            PE+ILEEF+ +RL +Y+KRK      L+    +L N+ RFI  +V+ ++ V+NRK+ D++
Sbjct: 1078 PEEILEEFYPVRLAYYQKRKDFLANELQTVFERLSNQARFIQMIVDKQLSVSNRKKADII 1137

Query: 1082 LELRQKGFTPFPKNSKS-----IEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAI 1136
             +LR+  F PFPK SK+     +E VV GA    E +EE  E  +G  + D+DYLL MAI
Sbjct: 1138 QDLRKHQFRPFPKISKAKAAGELEEVVDGA---DEPAEEEEETGSGDSATDFDYLLGMAI 1194

Query: 1137 GTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
             +LT EK+  L    ++   E+  L +  P  +W +DLD
Sbjct: 1195 YSLTKEKIGKLRQQANEKELELMALLEKKPSEMWNEDLD 1233


>gi|449015438|dbj|BAM78840.1| topoisomerase II [Cyanidioschyzon merolae strain 10D]
          Length = 1576

 Score = 1253 bits (3242), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1220 (51%), Positives = 835/1220 (68%), Gaps = 94/1220 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEE----------ESKTMIHRTIS 74
            K+IEE YQK SQLEH+LLRPDTYIGS ++ ++ LW+ ++           S+ ++ R +S
Sbjct: 18   KSIEETYQKLSQLEHVLLRPDTYIGSTQRTSEKLWVLDDTIAEEGASQGSSRRVVFRDVS 77

Query: 75   YVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVY 134
            YVPGLYKIFDEILVNAAD+KQRDP +D ++V +D E++ I+V+N+G G+PVEIH +EG Y
Sbjct: 78   YVPGLYKIFDEILVNAADHKQRDPTLDEIRVDVDAENNRITVYNNGSGIPVEIHSKEGCY 137

Query: 135  VPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTN 194
            VPELIFGHLLTSSNYDD  +K TGGRNG+GAKL NIFSTEFI+ETADG+    ++QVF +
Sbjct: 138  VPELIFGHLLTSSNYDDEERKVTGGRNGFGAKLANIFSTEFIVETADGRHC--FRQVFRS 195

Query: 195  NMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVK 254
            NM +  EP I  C   DN+T+VSF PDL +F M  L+ D +ALM+KRV D+AGC    VK
Sbjct: 196  NMQRCEEPQIRPCSAKDNYTRVSFVPDLQRFGMNALDADTLALMEKRVHDIAGC-NPGVK 254

Query: 255  VELNGHRVPVKSFAEYVDMY--PKSVTRF-HERVNERWEICVTLSEGQFQQVSFVNGIAT 311
            V  NG R+P++SF +Y+ +Y   +  T F +ER +ERWE+ V  S+GQFQQVSFVN I T
Sbjct: 255  VYWNGSRLPIRSFRDYIKLYLAEREDTSFVYERGHERWELAVAPSDGQFQQVSFVNSIWT 314

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
            IKGGTHV+++A+Q+ N V+  +++K+KN  VK   V+NHLW+FV  LI+NPAFDSQTKET
Sbjct: 315  IKGGTHVNHIADQIVNAVLEHLSRKHKNLKVKPFQVRNHLWLFVRCLIENPAFDSQTKET 374

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
            LT R  SFGS+CELS EF +K+  +S I+  +L +A F+Q  +LKK DG K + V GI K
Sbjct: 375  LTSRPQSFGSRCELSAEFTRKLL-RSDIIGNVLEFARFRQDAELKKTDGGKRQRVLGIPK 433

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            L+DAN AG R S +CTLILTEGDSAKALA++GLSVVGRD +GVFPLRGKLLNVREA+  Q
Sbjct: 434  LDDANKAGTRESAKCTLILTEGDSAKALAISGLSVVGRDYYGVFPLRGKLLNVREATHKQ 493

Query: 492  VLNNSEIGNIKKILGLKQGVEY--NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
            ++ N+EI  +KKILGL+ G EY  ++V+ LRYGH+MIMTD                    
Sbjct: 494  IMENTEINLLKKILGLQHGKEYDQDSVRQLRYGHVMIMTD-------------------- 533

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS--- 606
                    QDHDGSHIKGLL+NF H FWPSLL+IP FL+EFITPIVKAT K G+ L    
Sbjct: 534  --------QDHDGSHIKGLLVNFFHHFWPSLLRIPGFLLEFITPIVKATAKRGERLEEVV 585

Query: 607  FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
            F+++P+Y+ W++S   +   W+IKYYKGLGTST+ E + YF N++ H+  FVW++  D E
Sbjct: 586  FFTIPEYQQWRQS-QSSLRGWTIKYYKGLGTSTAAEARTYFSNLSRHQIPFVWQNHADYE 644

Query: 667  AIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
            +IELAFSK K++ RK WL   + G + D     + Y++FV+KEL+LFS+AD  RSIP ++
Sbjct: 645  SIELAFSKHKVQERKDWLAAHKLGTYFDHAADTLTYANFVHKELVLFSLADNARSIPCLI 704

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DGLKP QRK+LF  FKR   +E KVAQ +GYVSEH+AYHHGE SL +TI+G+AQ+FVGSN
Sbjct: 705  DGLKPSQRKVLFACFKRKLYQEIKVAQLAGYVSEHAAYHHGEASLMATIIGLAQNFVGSN 764

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            N+NLL P GQFGTR  GGKDAAS RYIFT L+P+ R LFP+ DD LL+YL EDG  IEP 
Sbjct: 765  NLNLLVPAGQFGTRLSGGKDAASPRYIFTCLAPVARALFPEADDVLLEYLEEDGLSIEPK 824

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL---NGEM-----MEPMHPW 898
            WY P+IP VLVNG+EGIGTGWS+ IP +NPRD+V  +R +L   +G +        + PW
Sbjct: 825  WYCPVIPLVLVNGAEGIGTGWSTNIPCHNPRDLVRILRSMLLESHGALDADNESATLVPW 884

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND 958
            YRGF G+I   A       Y V G +   ++  +RI+ELP+R WTQ Y+E+LE+++  N 
Sbjct: 885  YRGFRGSI--VAVPHHPTNYEVFGCMARSSDGRVRIRELPLRTWTQPYKEWLETLVVGNS 942

Query: 959  S----------------------FIRGFRQYSDDTTVDFEVFLSEES-MMRTKQEGLLKK 995
            S                      F++     S +T VDF +  +  + + +     L KK
Sbjct: 943  STSSSSSGSGSSASSAAQQTSRPFLKEVADNSTETLVDFTLHWANGAELEQADAAALFKK 1002

Query: 996  FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKL 1055
              L+ ++ST+NM LFDS G I++YDT +QIL EF+ +RLE Y KR+   +  LE EL++L
Sbjct: 1003 LHLSGSLSTANMVLFDSNGRIRRYDTIQQILVEFYQMRLELYRKRQAWIVRALERELIRL 1062

Query: 1056 ENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPK-NSKSIEAVV--AGATDETEE 1112
            +NKVRFI+ V+  +I++ NRKR++LL EL Q+ F   P  N+   E  V  A + D T +
Sbjct: 1063 DNKVRFIMAVIENQIIIANRKRSELLDELHQRNFARLPTGNNADREQRVSEAASGDGTPD 1122

Query: 1113 SEENPEV-VNGVQ------SIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKAT 1165
               + +V  NGV       +  YDYLLSM + +LT E+VQ L     +   E+  ++   
Sbjct: 1123 GTSSDQVGGNGVHADHPKDATGYDYLLSMPLWSLTRERVQELQRQHQEKAAELARMQATR 1182

Query: 1166 PESLWVKDLDALDMQLDELD 1185
            P  LW+ DL  L+  LD +D
Sbjct: 1183 PSELWLDDLTRLEQILDRID 1202


>gi|390603939|gb|EIN13330.1| type II DNA topoisomerase [Punctularia strigosozonata HHB-11173 SS5]
          Length = 1559

 Score = 1247 bits (3226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/1487 (46%), Positives = 930/1487 (62%), Gaps = 146/1487 (9%)

Query: 1    MTVDKRLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWI 60
            M +D        + + V+ P   NKT  EMYQK SQLEHIL RPD+YIGS+E   QA+W+
Sbjct: 56   MAIDNDSDDEKPSTSAVIAPPKKNKTASEMYQKLSQLEHILKRPDSYIGSVEAVRQAMWV 115

Query: 61   YEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSG 120
            Y+ +S  M++R + +VPG +KI DEILVNAADNK  DP MD +KV ID E   ISV+N+G
Sbjct: 116  YDSDSNRMVNREVKFVPGFFKIVDEILVNAADNKINDPNMDTLKVNIDVEEGTISVYNNG 175

Query: 121  DGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETA 180
             G+P+EIH +E +Y+PELIFGHLL+SSNYDD+ KK TGGRNGYGAKL NI+S EF +ETA
Sbjct: 176  KGIPIEIHSKEKIYIPELIFGHLLSSSNYDDDEKKLTGGRNGYGAKLANIYSHEFTVETA 235

Query: 181  DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKK 240
            D    KKYKQ +T+NMGK  +  I+   +   +TKV+FKPD  +F M  ++DD ++L+K+
Sbjct: 236  DKNMGKKYKQTWTDNMGKVGKAKITSGNQ--EYTKVTFKPDFERFGMDGIDDDTLSLLKR 293

Query: 241  RVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV----------------TRFHER 284
            RV DLAG + K+VKV LN  ++ +K+F +YV+MY  SV                T  +E+
Sbjct: 294  RVYDLAGTV-KNVKVYLNDKQLKIKNFKQYVEMYLNSVAEHASETSGGAAQAKSTVIYEQ 352

Query: 285  VNERWEICVTLSE-GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVK 343
            +N R+E+   LS+ G FQQVSF N IAT KGG HVD VA+Q+A +++  + KKNK A VK
Sbjct: 353  INPRFEVAFALSDTGNFQQVSFANSIATTKGGRHVDLVADQIAKNLLTQIEKKNKGAKVK 412

Query: 344  AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETL 403
               +KNH+W+FVNAL++NP FDSQTK+TLTL  + FG+K  +SE+F+KK+ AKS I++ +
Sbjct: 413  PATIKNHMWIFVNALVENPTFDSQTKDTLTLAANKFGTKPVVSEDFMKKI-AKSSIIDHV 471

Query: 404  LSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAG 463
            L+WA F+  K  KK DG+K   + G+ KL DAN AGGRN++ CTLILTEGDSAKALA+AG
Sbjct: 472  LNWAQFQADKQAKKTDGSKRSRLTGLPKLSDANNAGGRNAKDCTLILTEGDSAKALAVAG 531

Query: 464  LSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGH 523
            LSVVGRD FGVFPLRGKLLNVREA  +QV+ N EI NIKKI+GL+   EY +  SLRYG 
Sbjct: 532  LSVVGRDNFGVFPLRGKLLNVREARHDQVMKNEEIQNIKKIMGLQHNKEYADRSSLRYGQ 591

Query: 524  LMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI 583
            LMIMTDQ                            DHDGSHIKGLLIN++  F+PSLLKI
Sbjct: 592  LMIMTDQ----------------------------DHDGSHIKGLLINYLDHFYPSLLKI 623

Query: 584  PSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEG 643
            P+FLVEF+TPIV+ T K  +   F+++P+YE W E+   ++  W  KYYKGLGTS   + 
Sbjct: 624  PNFLVEFVTPIVRVT-KGKERKDFFTIPEYERWLENTP-DSHKWESKYYKGLGTSKDSDA 681

Query: 644  KEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYS 703
             +YF ++  H   F    D D E I+LAFSKKK + RK+WL Q  PG +L+     I YS
Sbjct: 682  MDYFSHMEKHMIPFATTQDGDRELIDLAFSKKKADDRKEWLRQCRPGTYLNHDVDEIPYS 741

Query: 704  DFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSA 763
            DF+NKELILFSMAD  RSIPS+ DGLKPGQRK+++  F+R   KE KVAQ  GY++EH+A
Sbjct: 742  DFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCFRRKLKKEIKVAQLVGYIAEHAA 801

Query: 764  YHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRF 823
            YHHGEQSL +TI+ +AQD+VGSNN+NLL PNGQ+GTR QGGKD ASARYIFT  SPI R 
Sbjct: 802  YHHGEQSLMATIVNLAQDYVGSNNLNLLMPNGQYGTREQGGKDHASARYIFTEPSPIARA 861

Query: 824  LFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANV 883
            +F + DD LL+YL +D   IEP WYMP++P VL+NG+EGIGTGWS+ IP+YNP DIV N+
Sbjct: 862  IFHQQDDPLLNYLKDDNDPIEPEWYMPVLPLVLINGAEGIGTGWSTSIPSYNPVDIVENI 921

Query: 884  RRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWT 943
            RRL+ GE M PM PW+RGF GT++K +       + VTG+I + +ETT+ I ELPI +WT
Sbjct: 922  RRLMRGEEMVPMMPWWRGFRGTVKKVSENR----FDVTGVIRKKDETTIEITELPIHKWT 977

Query: 944  QDYREFLESII-DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQE--GLLKKFKLTT 1000
            Q+Y+  LE++I ++ D  I+ ++++ ++  V F +  + + M + ++E  GL + FK+TT
Sbjct: 978  QNYKAELEAMIGEKGDGLIKDYKEHHNNINVHFVINTTAKDMEKIEKEKGGLEEYFKMTT 1037

Query: 1001 TISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVR 1060
             I+TSNM  FD +G I+KY+TPE+I+EEF+ +RL +Y+KRK      L+L+  KL N+ R
Sbjct: 1038 KINTSNMICFDFEGKIRKYNTPEEIIEEFYPMRLAYYQKRKDFMANELQLQFEKLSNQAR 1097

Query: 1061 FILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDE-TEESEENPEV 1119
            F+  +V+ E+ V+NRK+ D++ ELR++ F PFPK +K   A  AG   E  E+++E  EV
Sbjct: 1098 FVQMIVDRELSVSNRKKADIVAELRKREFRPFPKVAK---AKAAGENAEVVEDADELEEV 1154

Query: 1120 VNGVQSI----DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
                Q+     DYDYLL M I  LT EK++ L         E+  L + TP  +W +DLD
Sbjct: 1155 EREAQATGAGSDYDYLLGMPIYALTKEKIEKLRQQMGDKEAELLTLLERTPIEIWNEDLD 1214

Query: 1176 ALDMQLDELDKSDARAEEE--------------------RMKIKGNGN------------ 1203
                 L+EL +++   E +                    R  + G G             
Sbjct: 1215 KF---LEELSRNNEEWERKGEVDASGKKVKKKQGAKLRTRKSLPGPGKRKGDDDDSEDDW 1271

Query: 1204 -------GDAGPK------IVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGR 1250
                    ++ PK      ++ KR  KNA  +              E D+   VV P  R
Sbjct: 1272 KPTKAKAAESKPKPGTIAAMMEKRKEKNAAASGSGVKKEDKEAKKEEDDDDEPVVVPTKR 1331

Query: 1251 AGLKKAPAE-KLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKK 1309
            A  KK PA  + D+D + E+ D+K + A           +P+P     ++ E      K 
Sbjct: 1332 ATTKKKPAYVEADEDSDIEMMDVKPKTAS----------KPAPKAKKAVKEESDDEDVKP 1381

Query: 1310 KEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIAAPEEGKKGGRKAAGNSKA-----A 1364
                ++  A+ K    E+ D + +  + + +     A  +GK   RK+ G+ +       
Sbjct: 1382 PSGGRKGKAKAK---EESDDDDGDFALGESKKVTAGAKAKGK---RKSVGSEEEESDAYV 1435

Query: 1365 KPAAETKKRG--------PAKKQQPEA--SLGQRLLTEMLKPAESSP 1401
            KPA +  K          PAK + P A  + G   +  M   A SSP
Sbjct: 1436 KPAPKKAKATLNDFFDDPPAKAKAPTARKASGTSKVAAMKSKASSSP 1482


>gi|388854922|emb|CCF51425.1| probable DNA topoisomerase II [Ustilago hordei]
          Length = 1503

 Score = 1246 bits (3224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1188 (52%), Positives = 823/1188 (69%), Gaps = 76/1188 (6%)

Query: 20   PTAPNKT-----IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTIS 74
            P AP+K+       E YQK SQLEHIL RPDTYIGS+EKHT+ LW+Y++  + M +R  +
Sbjct: 84   PPAPSKSSNGKSASETYQKLSQLEHILKRPDTYIGSVEKHTEKLWVYDKTKQQMAYRETT 143

Query: 75   YVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVY 134
            YVPG YKIFDEILVNAADNK RDP M  +KV + ++   ISV N+G G+PVE+H++EGVY
Sbjct: 144  YVPGFYKIFDEILVNAADNKARDPNMTHLKVEVKRDEGTISVWNNGHGIPVEMHEKEGVY 203

Query: 135  VPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTN 194
            +PELIFGHLLTSSNY+D+  K TGGRNGYGAKL NI+STEF +ETAD K   KYKQ FT+
Sbjct: 204  IPELIFGHLLTSSNYNDDEAKVTGGRNGYGAKLANIYSTEFTVETADAKNQCKYKQTFTS 263

Query: 195  NMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVK 254
            NM +K +P I+  K+ D +T ++FKPD A F M  ++D + ALM KRV D+AG + K +K
Sbjct: 264  NMHEKGKPKITSHKKNDEYTCITFKPDFALFGMESIDDHIEALMLKRVYDMAGTV-KGIK 322

Query: 255  VELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE-------------------------RW 289
            V LNG  + +K+F +YV+MY  ++     + NE                          W
Sbjct: 323  VTLNGEVLKIKNFKQYVEMYVTAINELGGKANEDGEDLPAGAAPKPAIIYESTVDKGRNW 382

Query: 290  EICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKN 349
            E+   +S+G+F+QVSFVN IATIKGG HVD+VA+QV + ++  V K  K   V  + V+ 
Sbjct: 383  EVAFAVSDGEFRQVSFVNNIATIKGGKHVDHVADQVISRLIEQVKKDKKTGKVMPNQVRQ 442

Query: 350  HLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANF 409
             LWVFVN  I NP FD QTKETLTL+QS+FGSK  L+++F +K+  KSG+V+ ++S+A +
Sbjct: 443  QLWVFVNCQIVNPTFDGQTKETLTLKQSAFGSKWTLTDDFARKII-KSGVVDNIVSFARY 501

Query: 410  KQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGR 469
            KQ + LKK DG K   +  I KLEDAN AGGR ++ CTLILTEGDSAKALA+AGL  VGR
Sbjct: 502  KQDQALKKTDGHKRTRITNIPKLEDANNAGGRKAKDCTLILTEGDSAKALAVAGLVEVGR 561

Query: 470  DRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTD 529
            D +GVFPLRGKLLNVREA+ +Q++ N+EI  IK+I+GL+ G +Y +V SLRYG +MIMTD
Sbjct: 562  DNYGVFPLRGKLLNVREATHDQIMKNAEIKAIKEIIGLQHGKQYLDVSSLRYGSIMIMTD 621

Query: 530  QVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVE 589
            Q                            DHDGSHIKGL+INF+  F+PSLLK+P+FLVE
Sbjct: 622  Q----------------------------DHDGSHIKGLIINFLDHFYPSLLKLPNFLVE 653

Query: 590  FITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
            FITPIVK + K  K LSF+++P+Y  WKE+   N   W IKYYKGLGTS S++ K+YF+ 
Sbjct: 654  FITPIVKCS-KGKKELSFFTIPEYMTWKEA-NSNGKGWRIKYYKGLGTSDSQDAKKYFRA 711

Query: 650  ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKE 709
            +  H   F    D D E I+LAF+KKK + RK+WL QF PG +LD     I Y+DF+NKE
Sbjct: 712  MDKHMLPFDTTKDGDRELIDLAFNKKKADDRKEWLRQFRPGTYLDHNIDKIPYADFINKE 771

Query: 710  LILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQ 769
            LILFSMAD  RSIPS VDGLKPGQRK++F +F R    E KVAQ  G+VS  +AYHHGEQ
Sbjct: 772  LILFSMADNMRSIPSAVDGLKPGQRKVIFGTFNRKGDGEIKVAQLVGHVSGTTAYHHGEQ 831

Query: 770  SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
            SL  TI+G+AQ+FVGSNN+NLL+P GQFGTR  GGKDAASARYIFT L  ITR LFP++D
Sbjct: 832  SLTMTIVGLAQNFVGSNNVNLLEPRGQFGTRLLGGKDAASARYIFTALPKITRALFPQND 891

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
            D LL+YL++DGQ IEP WYMP++P VL+NG+EGIGTGWS+++PNYNP DIVAN+RR + G
Sbjct: 892  DALLEYLDDDGQSIEPQWYMPVVPQVLLNGAEGIGTGWSTFVPNYNPHDIVANLRRRMAG 951

Query: 890  EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREF 949
            E + PM PWYRGF G IE+ A       Y ++G + +++E T  I ELPIR WT  Y+E 
Sbjct: 952  EDVVPMKPWYRGFTGDIEEFAPGR----YKLSGRVTQIDEKTYEITELPIRTWTSTYKES 1007

Query: 950  LESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN 1006
            LE  I   ++  S I+ +++Y  ++TV F V L+ +      ++G+   FK ++ IST+N
Sbjct: 1008 LEERILSTEKVPSTIKDYKEYHTESTVHFIVELNAKGQAEIAEKGVEAFFKTSSQISTTN 1067

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            M LFD  G IKKY +PE+ILE F+ +RL +Y+KRK+  ++ L+L   +L N+ RF+  ++
Sbjct: 1068 MVLFDQDGKIKKYSSPEEILENFYLLRLSYYQKRKEHLVDQLKLMYDRLSNQARFVQMII 1127

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI 1126
            + +++V+NRKR D++ ELRQK F PFPK+ K+  A     TD  ++ E + +        
Sbjct: 1128 SRQLIVSNRKRADIVAELRQKDFRPFPKSGKATVAAEIEDTDPIDDEEISSDS------- 1180

Query: 1127 DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDL 1174
            DYDYLL+MAI  LT EKV  LL +RD   EE+  L   +P++LW +DL
Sbjct: 1181 DYDYLLNMAIYNLTKEKVDKLLKERDAKEEELKILIGRSPQNLWDEDL 1228


>gi|320166777|gb|EFW43676.1| DNA topoisomerase II [Capsaspora owczarzaki ATCC 30864]
          Length = 1628

 Score = 1245 bits (3222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1206 (51%), Positives = 842/1206 (69%), Gaps = 58/1206 (4%)

Query: 8    PLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT 67
            PL  +++AN  GP A   T+EE Y K    + ILLRPDTYIG +   T+ LW+  EE K 
Sbjct: 33   PLGDASSANAAGP-AKKLTVEETYLKLELRDQILLRPDTYIGGVATETKNLWVCNEEGK- 90

Query: 68   MIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEI 127
              +R +S+VPGL+KIFDE+LVNA+DNKQRD  M  ++V I+Q  + ISV N G G+P+ +
Sbjct: 91   FENRDVSFVPGLFKIFDELLVNASDNKQRDSSMTTIRVDINQADNTISVWNDGKGIPIRM 150

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
            H +E V+VP LIF HLLTS NY  N KKTTGGRNGYGAKL NIFSTEF++ET D +  ++
Sbjct: 151  HTKENVWVPTLIFSHLLTSDNYTTNKKKTTGGRNGYGAKLANIFSTEFVVETQDHETKQR 210

Query: 188  YKQVFTNNMGKKSEPNISKCKEGD--NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDL 245
            +KQVFT NM +  +  IS  + G   ++TK++FKPDL++F M +L+DD+V L ++RV D+
Sbjct: 211  FKQVFTKNMSQSGQAIISPSEGGSKGDFTKITFKPDLSRFKMDYLDDDIVGLFRRRVYDI 270

Query: 246  AGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV---TRFHERVNERWEICVTLSEGQFQQ 302
            AGC+ + +KV LN + +P++SF +YV +Y       +  HERV++RWE+CVT++    QQ
Sbjct: 271  AGCM-RGLKVYLNDNLIPIRSFVDYVKLYLPDAPLNSIAHERVSDRWEVCVTVAPDGHQQ 329

Query: 303  VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNP 362
            VSFVNGI T  GGTHV++V   +   +   + K+ K   +K   +KN++ +FVNALID+P
Sbjct: 330  VSFVNGINTYTGGTHVNHVLELIYPTISKAL-KQPKGNEIKKPQIKNNISIFVNALIDDP 388

Query: 363  AFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
             F SQ+KE L+L    FGS+C  S++F K + + +GIV+ +L   N K  K+L K  G K
Sbjct: 389  TFKSQSKEELSLSVKEFGSECTFSDKFNKALLS-TGIVQAILDKNNEKLRKELDKISGRK 447

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
            +  + GI+KL+DAN AGGRNS QCTLILTEGDSAKALA++GL +VGRD +GVFPLRGKLL
Sbjct: 448  SSKISGIAKLDDANEAGGRNSAQCTLILTEGDSAKALAVSGLGLVGRDYYGVFPLRGKLL 507

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            NVR+A+ +Q+  N EI ++ KILGL+   +Y +V+ LRYG LMIMTDQ            
Sbjct: 508  NVRDAAHHQIRENQEIEHVIKILGLQFNKKYTSVEGLRYGRLMIMTDQ------------ 555

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG 602
                            D DGSHIKGLLINF+H FWPSLL +  FLVEFITPIVKAT K  
Sbjct: 556  ----------------DSDGSHIKGLLINFLHHFWPSLLTVSGFLVEFITPIVKAT-KGK 598

Query: 603  KVLSFYSMPDYEAWKESLGGNAS-SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWED 661
            +VL+F+++P Y+ W+E   G A   W+IKYYKGLGTSTS+E KEYF N+ +H+  F W  
Sbjct: 599  QVLTFFTVPQYQQWREEDDGRACKGWTIKYYKGLGTSTSQEAKEYFSNMDVHQIPFTWSG 658

Query: 662  DQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
            + DG+AI+LAFSKK+ + RK+WL QF  G  LD + + I YS+F+NKELILFSMAD  RS
Sbjct: 659  EDDGQAIDLAFSKKRADDRKEWLRQFRAGTFLDHQTEAITYSEFINKELILFSMADNVRS 718

Query: 722  IPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQD 781
            IPS+VDG KP QRK+LF  FKRN   E KVAQ +GYV+EHSAYHHGE SLA TI+ MAQ+
Sbjct: 719  IPSVVDGFKPSQRKVLFACFKRNLKDEIKVAQLAGYVAEHSAYHHGEVSLAGTIVNMAQN 778

Query: 782  FVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQ 841
            + GSNNINLL P GQFGTR QGGKDAASARYIFT+L+ +TR +FP +DD LL+YL+EDGQ
Sbjct: 779  YTGSNNINLLLPLGQFGTRLQGGKDAASARYIFTKLATLTRLIFPANDDSLLNYLDEDGQ 838

Query: 842  QIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRG 901
            +IEP WYMPI+P  L+NG EGIGTGWSS +PN++PRD+VAN+R ++ G+  EPM P+Y G
Sbjct: 839  RIEPEWYMPILPLSLINGCEGIGTGWSSSVPNFSPRDVVANIRLMMAGQDPEPMCPYYNG 898

Query: 902  FGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND--- 958
            F GTIE     +    + V G I +++ TTL I ELPI  WTQ Y+E LE +++ N+   
Sbjct: 899  FTGTIEPLGKAD---RFRVCGRITKLSATTLEITELPIGVWTQSYKEELEKLMEPNEKDK 955

Query: 959  --SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
               FI+ FR+   DT+V F V LSEE+M   +  GL KKFK+ +TIST+NM  FD++G I
Sbjct: 956  TPGFIKDFRENHTDTSVHFTVTLSEENMAAAEAMGLAKKFKIDSTISTANMVFFDAEGRI 1015

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYD+P+ IL +F+ +RL++Y+KRK   +E L  E  +L+NKVRFI  V+ G++V++NRK
Sbjct: 1016 KKYDSPQAILRDFYDLRLKYYQKRKSWLVERLTEEWTRLDNKVRFIQAVIKGDLVISNRK 1075

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVA------GATDETEESEENPEVVNGVQSIDYDY 1130
            R DL+ +L+ +G+T F  ++K I+   A      G  DET +++ +    + V +  YDY
Sbjct: 1076 RADLMRDLKTRGYTAFSTSTKKIKIAGAIDADDNGGADETADNDSD----DIVHTNGYDY 1131

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL+M + +LTLEKVQ LL +R    EE+  L + +  +LW +DLDA + +L  +++  A 
Sbjct: 1132 LLTMPLWSLTLEKVQQLLGERSVKEEELKVLLEKSTLTLWSEDLDAFEAELIRVEEQAAL 1191

Query: 1191 AEEERM 1196
             +E  +
Sbjct: 1192 DQENNL 1197


>gi|409051031|gb|EKM60507.1| hypothetical protein PHACADRAFT_83842 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1551

 Score = 1244 bits (3218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1175 (52%), Positives = 822/1175 (69%), Gaps = 58/1175 (4%)

Query: 20   PTAP--NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVP 77
            P AP  NKT  E YQK +QLEHIL RPD+YIGS+EK TQ +W+++ E+K M++R I+YVP
Sbjct: 83   PAAPAKNKTASETYQKLTQLEHILKRPDSYIGSVEKITQPMWVWDSETKRMVNREITYVP 142

Query: 78   GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
            G +KI DEILVNAADNK  DP MD +KV +D E++ ISV N+G G+P+E+H  E VY+PE
Sbjct: 143  GFFKIVDEILVNAADNKINDPSMDTIKVTVDPENNTISVFNNGRGIPIEMHSTEKVYIPE 202

Query: 138  LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
            LIFGHLL+SSNYDD+ KK TGGRNGYGAKL NI+STEF ++TAD    ++Y Q +T+NMG
Sbjct: 203  LIFGHLLSSSNYDDDEKKLTGGRNGYGAKLANIYSTEFTVDTADKNTAQRYVQTWTDNMG 262

Query: 198  KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL 257
            K  +  I+K  + +  T+V+FKPDL +F M  +++  +AL+KKRV D+AG   K VKV L
Sbjct: 263  KMGKAKITKNSKKEEHTRVTFKPDLKRFGMDSIDEHALALLKKRVYDMAGTT-KDVKVFL 321

Query: 258  NGHRVPVKSFAEYVDMYPKSV----------------TRFHERVNERWEICVTLSEGQFQ 301
            N  R+ VK F +YV++Y  SV                T  +E ++ RWE+   +S+G FQ
Sbjct: 322  NDERIKVKGFKQYVELYLNSVAEQAQEESGGAALVKPTMIYETISSRWEVAFAVSDGTFQ 381

Query: 302  QVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDN 361
             V+F N IAT KGGTHV  +A+Q+A ++ A + KKNK A VK  ++K+H+W+FVNALI+N
Sbjct: 382  HVAFANSIATTKGGTHVTCIADQIAKNLAANIQKKNKGAAVKPAHIKSHMWIFVNALIEN 441

Query: 362  PAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT 421
            P FDSQTKE LTL    FG++  LSE+F+KKV  KS I++ +L+WAN K  K+LKK DG 
Sbjct: 442  PTFDSQTKEQLTLPAGKFGTRPTLSEDFMKKVQ-KSSIIDQILNWANRKADKELKKTDGK 500

Query: 422  KTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKL 481
                ++G++KL DAN AG R ++ CTLILTEGDSAK+LA+AGLSV+GRD +GVFPLRGKL
Sbjct: 501  GRNRIKGLTKLSDANNAGTRGAQNCTLILTEGDSAKSLAVAGLSVIGRDNYGVFPLRGKL 560

Query: 482  LNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLW 541
            LNVREA  +Q++ N EI NIKKILGL+   +Y +   LRYG LMIMTDQ           
Sbjct: 561  LNVREAKHDQIMKNEEIQNIKKILGLQHNKDYKDTNDLRYGQLMIMTDQ----------- 609

Query: 542  FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
                             DHDGSHIKGL++N++  F+PSLLKIP FLVEF+TPIV+ T  N
Sbjct: 610  -----------------DHDGSHIKGLILNYLDHFYPSLLKIPKFLVEFVTPIVRVTKGN 652

Query: 602  GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWED 661
             K+ +F+++P+YE W E+   ++  W  KYYKGLGTS  ++ +EYF  +  H   F    
Sbjct: 653  QKI-NFFTIPEYEQWLENTP-DSHKWKSKYYKGLGTSKDEDAREYFSRMNKHMIPFATVK 710

Query: 662  DQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
            D + + I+LAFSKKK + RK+WL   EPG +LD   + I  SDF+N+ELILFS AD  RS
Sbjct: 711  DGERDLIDLAFSKKKADDRKEWLRNLEPGTYLDHNTREISVSDFINRELILFSYADNVRS 770

Query: 722  IPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQD 781
            IPS+ DGLKPGQRK+++  FKR    E KVAQ  GY+SE +AYHHGEQSL  TI+ +AQD
Sbjct: 771  IPSVADGLKPGQRKVIWGCFKRKLKNEIKVAQLVGYISEKAAYHHGEQSLMMTIVNLAQD 830

Query: 782  FVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQ 841
            F+GSNN+NLL PNGQFGTR+QGGKD ASARYIFT  SP+ R L    DD LL+YL +D  
Sbjct: 831  FIGSNNVNLLMPNGQFGTRDQGGKDHASARYIFTEPSPMARVLLHSGDDPLLNYLKDDTT 890

Query: 842  QIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRG 901
             IEP WYMP++P +LVNG+EGIGTGWS+ +P YNP DIVAN+RR +NGE M PM PW+RG
Sbjct: 891  DIEPEWYMPVLPLILVNGAEGIGTGWSTNVPCYNPVDIVANIRRRMNGEEMVPMLPWWRG 950

Query: 902  FGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII-DQNDSF 960
            F GTI+KT   +    Y VTGII ++++TT+ I ELPI +WTQ+Y++ LE+++ ++ +  
Sbjct: 951  FRGTIKKTGDHK----YDVTGIINKIDDTTVEITELPIHKWTQNYKQELETMMGEKGEGP 1006

Query: 961  IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYD 1020
            ++ +++Y D+  V F V LSE+ M + + +GL + FKLT  I+TSNM  FD  G IKKY 
Sbjct: 1007 VKDYKEYHDNMNVHFVVTLSEKDMEKAEAQGLYEFFKLTGKINTSNMICFDFDGKIKKYG 1066

Query: 1021 TPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDL 1080
            +PE+I+E+F+ +RL +Y+KRK    E L+LEL +  N+ RFI  +V+ E+VV+ RK+ D+
Sbjct: 1067 SPEEIVEDFYPVRLAWYQKRKDHMAEQLQLELERSTNQARFISMIVSKELVVSGRKKADV 1126

Query: 1081 LLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLT 1140
            +++LR+K F PFPK SK   A  AG T+E  E+ +  E  +   + DYDYLL+MAI +LT
Sbjct: 1127 IIDLRKKEFRPFPKISK---AKAAGETEEVVENGDEDEQEDNDGAHDYDYLLNMAIYSLT 1183

Query: 1141 LEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
             E+++ L         E+  L + TP  +W  DLD
Sbjct: 1184 KERIEKLKKQAADKEAELLKLLELTPIQMWNTDLD 1218


>gi|348667921|gb|EGZ07746.1| hypothetical protein PHYSODRAFT_565596 [Phytophthora sojae]
          Length = 1289

 Score = 1243 bits (3216), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 648/1256 (51%), Positives = 848/1256 (67%), Gaps = 105/1256 (8%)

Query: 22   APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
             P ++IE++YQKK+QLEHILLRPDTY+GSIE   Q++W++++E K M++R I+YVPGLYK
Sbjct: 86   TPKQSIEQIYQKKTQLEHILLRPDTYVGSIEHVEQSMWVFDDEKKRMVNRKINYVPGLYK 145

Query: 82   IFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            IFDEI+VNA DNKQRD  M+ +KV ID E + ISV N+G G+P+ +H+E  VYVPELIFG
Sbjct: 146  IFDEIIVNACDNKQRDKSMNTLKVTIDVEQNEISVWNNGKGIPIVLHKEHKVYVPELIFG 205

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            HLLT SN+DD  KKTTGGRNGYGAKL NIFSTEF++ETAD    ++YKQVF NNMGKK+ 
Sbjct: 206  HLLTGSNFDDKKKKTTGGRNGYGAKLANIFSTEFVVETADASTKQRYKQVFENNMGKKNP 265

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            P+I+K  + D +T +SFKPDL +F +  L DD+VAL KKRV D+AG  GK + V LNG +
Sbjct: 266  PSITKWAQKD-FTCISFKPDLERFKLDFLNDDIVALFKKRVYDVAGVSGKGLNVFLNGEK 324

Query: 262  VPVKSFAEYVDMYP------------------------------------------KSVT 279
            +P+KSF +YV +YP                                           +VT
Sbjct: 325  IPIKSFPQYVALYPGPRGFEADTETKDDDDSHPEENDDDDDYSEEKGKKAKAKAKPTNVT 384

Query: 280  R---FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK 336
            +     E+ +ERW++ V  SE  FQQVSFVNGI T KGG HV Y+ +QV   ++ V+ KK
Sbjct: 385  KNGVIFEKPDERWQVGVGQSEDGFQQVSFVNGICTTKGGQHVSYIVDQVTTKLVNVLKKK 444

Query: 337  NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAK 396
            NK   VK + +KNH++V+V+ALIDNPAFDSQTKETLT R +SFGS   L+++FLK+V  K
Sbjct: 445  NKGEAVKPNYIKNHMFVYVSALIDNPAFDSQTKETLTTRANSFGSTFSLTDKFLKQV-EK 503

Query: 397  SGIVETLLSWANFKQSKDLKKNDGTKTEDVR--GISKLEDANLAGGRNSEQCTLILTEGD 454
            SG+VE +LS+A FKQ+ +L++  G   +  R  GI KL+DAN AG   S+ CTLILTEGD
Sbjct: 504  SGLVEKILSFAAFKQTAELRRKGGGGGKRSRLTGIPKLDDANHAGTAKSKDCTLILTEGD 563

Query: 455  SAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN 514
            SAK +A+ GL+VVGRD +GVFPLRGK+LNVREAS +Q+L N EI N+ KILGLK G +Y 
Sbjct: 564  SAKTVAVGGLAVVGRDYYGVFPLRGKMLNVREASHSQILKNEEIQNVVKILGLKYGQKYE 623

Query: 515  NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIH 574
            + K LRYGHLMIM DQ                            DHDGSHIKGL+IN IH
Sbjct: 624  STKGLRYGHLMIMADQ----------------------------DHDGSHIKGLVINLIH 655

Query: 575  SFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKG 634
             FWPSLL +  FL EFITPIVK +    K + FY+MP+YEAW+E        W IKYYKG
Sbjct: 656  HFWPSLLLVDGFLQEFITPIVKCSKGRTKEV-FYTMPEYEAWRERTN-QGRGWVIKYYKG 713

Query: 635  LGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLD 694
            LGTST+ E KEYF ++  H+  F +  + D + I++AFSKK++E RK+WL  +EPG ++D
Sbjct: 714  LGTSTAAETKEYFSDLRTHQIGFTYGGEGDADVIDMAFSKKRVEDRKEWLRGYEPGTYVD 773

Query: 695  QKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQF 754
                 + Y+DFVNKELILFSMAD  RSIPS+VDG KP QRK+LFC FKRN   E KVAQ 
Sbjct: 774  YDVDEMGYTDFVNKELILFSMADNIRSIPSIVDGFKPSQRKVLFCCFKRNLRSELKVAQL 833

Query: 755  SGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIF 814
            +GYVSEHSAYHHGE SL   I+ MAQDFVGSNN++LL P GQFGTR  GGKDAASARYIF
Sbjct: 834  AGYVSEHSAYHHGEASLQGCIVNMAQDFVGSNNVHLLSPIGQFGTRLMGGKDAASARYIF 893

Query: 815  TRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNY 874
            T L  +TR ++   D+ +L YL+EDGQ IEP WY+P+IP VLVNGS+GIGTGWSS +PNY
Sbjct: 894  TNLEQLTRRIYDPLDNDVLKYLDEDGQSIEPEWYIPVIPMVLVNGSDGIGTGWSSSVPNY 953

Query: 875  NPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI-EKTASKEAGV-TYTVTGIIEEVNETTL 932
            NP DI+  +R+++NGE   P+ PWYRGF G I EKT S+      Y V G+ E  +++TL
Sbjct: 954  NPLDIIKGLRQMINGEEASPLTPWYRGFTGHIVEKTNSRGTDTGNYIVQGLYEVTDDSTL 1013

Query: 933  RIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESM--MRTKQE 990
             I ELP++ WTQ Y++FLE +++     I+ F++   D  V F + L  +++  +   Q 
Sbjct: 1014 VISELPVKTWTQSYKQFLEGLLETGT--IKDFKENHTDVKVLFTITLEPKTLSDIAKTQG 1071

Query: 991  GLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLEL 1050
            G++KKFKL +++STSNMHLFD+ G IKKY+ P++I+EEF+ IRL++Y +RK+  L+ L  
Sbjct: 1072 GIVKKFKLESSLSTSNMHLFDAAGHIKKYENPKEIMEEFYGIRLDYYGRRKEAMLQKLRD 1131

Query: 1051 ELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF-PKNSKSIEAVVAGATDE 1109
            ++  L NK RF+L VV G++VVNNRK+ +LL EL  +G+    PK  K  ++  +  ++E
Sbjct: 1132 QIKLLSNKARFVLSVVEGKLVVNNRKKQELLEELIAEGYDQIAPKTKKKSDSEDSNESEE 1191

Query: 1110 TEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESL 1169
             + +  +        S  YDYLLSM I +LT E+V  L A+  +  +E   L   T   L
Sbjct: 1192 EDINVADA-------SRGYDYLLSMKIWSLTKERVDNLRAELQEREQEYTVLEGRTVRDL 1244

Query: 1170 WVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKK 1225
            W+ DLDAL+  + E +     A+ ER+           PK   + APK+A K  K+
Sbjct: 1245 WLTDLDALEKMITETE-----AQRERIL-------SHTPKKKTRAAPKSATKKRKR 1288


>gi|19112597|ref|NP_595805.1| DNA topoisomerase II [Schizosaccharomyces pombe 972h-]
 gi|12644105|sp|P08096.2|TOP2_SCHPO RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|3393015|emb|CAA20107.1| DNA topoisomerase II [Schizosaccharomyces pombe]
          Length = 1485

 Score = 1240 bits (3209), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1227 (50%), Positives = 843/1227 (68%), Gaps = 64/1227 (5%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQ+ +  EH+L RPDTYIGSIE  T  +W+++ E   + ++ ++YVPGLYKIFDEI+VNA
Sbjct: 78   YQRLTPREHVLRRPDTYIGSIEPTTSEMWVFDSEKNKLDYKAVTYVPGLYKIFDEIIVNA 137

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M+ +KV +D E ++IS++N+G G+P+EIH +E +Y+PELIFG+LLTSSNYD
Sbjct: 138  ADNKVRDPNMNTLKVTLDPEANVISIYNNGKGIPIEIHDKEKIYIPELIFGNLLTSSNYD 197

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            DN KK TGGRNGYGAKL NIFSTEF++ETAD +R+KKYKQ + +NM +KSEP I+  K+ 
Sbjct: 198  DNQKKVTGGRNGYGAKLCNIFSTEFVVETADKERMKKYKQTWYDNMSRKSEPVITSLKKP 257

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D +TK++FKPDLAKF M  ++DD+V+++K+R+ D+AG + +  KV LN  R+ +  F +Y
Sbjct: 258  DEYTKITFKPDLAKFGMDKIDDDMVSIIKRRIYDMAGTV-RETKVYLNNERISISGFKKY 316

Query: 271  VDMYPKSVTR--------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVA 322
            V+MY  S T+         +E VN+RW++   +S+GQF+QVSFVN I+TI+GGTHV+YVA
Sbjct: 317  VEMYLASDTKPDEEPPRVIYEHVNDRWDVAFAVSDGQFKQVSFVNNISTIRGGTHVNYVA 376

Query: 323  NQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSK 382
            N++ + +  VV K+NK A VKA  +KN++ VFVN  I+NP+FDSQTKETLT + S+FGS+
Sbjct: 377  NKIVDAIDEVVKKENKKAPVKAFQIKNYVQVFVNCQIENPSFDSQTKETLTTKVSAFGSQ 436

Query: 383  CELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
            C LS++FLK +  KS +VE +L +A  K  + L K DG     + G++KLEDAN AG + 
Sbjct: 437  CTLSDKFLKAI-KKSSVVEEVLKFATAKADQQLSKGDGGLRSRITGLTKLEDANKAGTKE 495

Query: 443  SEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIK 502
            S +C LILTEGDSAK+LA++GLSVVGRD +GVFPLRGKLLNVREAS +Q+LNN EI  IK
Sbjct: 496  SHKCVLILTEGDSAKSLAVSGLSVVGRDYYGVFPLRGKLLNVREASHSQILNNKEIQAIK 555

Query: 503  KILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDG 562
            KI+G      Y +VK LRYGHLMIMTDQ                            DHDG
Sbjct: 556  KIMGFTHKKTYTDVKGLRYGHLMIMTDQ----------------------------DHDG 587

Query: 563  SHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGG 622
            SHIKGL+IN++ S +PSLL+IP FL++FITPI+K T  N +V +FY++P+YE WKE+   
Sbjct: 588  SHIKGLIINYLESSYPSLLQIPGFLIQFITPIIKCTRGN-QVQAFYTLPEYEYWKEA-NN 645

Query: 623  NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
            N   W IKYYKGLGTS   + K YF ++  H K F    ++D E IE+AF+KKK + RK+
Sbjct: 646  NGRGWKIKYYKGLGTSDHDDMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKE 705

Query: 683  WLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
            WL  + PG ++D  +  I   DF+N+ELI FSMAD  RSIPS+VDGLKPGQRK+++  FK
Sbjct: 706  WLRTYRPGIYMDYTQPQIPIDDFINRELIQFSMADNIRSIPSVVDGLKPGQRKVVYYCFK 765

Query: 743  RNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQ 802
            RN + E KV++ +GYV+  +AYHHGE S+  TI+ +AQ+FVGSNNINLL PNGQFGTR++
Sbjct: 766  RNLVHETKVSRLAGYVASETAYHHGEVSMEQTIVNLAQNFVGSNNINLLMPNGQFGTRSE 825

Query: 803  GGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEG 862
            GGK+A+++RY+ T LSP+ R LF  +DD+LL+Y N++GQ IEP +Y+PI+P VLVNG+EG
Sbjct: 826  GGKNASASRYLNTALSPLARVLFNSNDDQLLNYQNDEGQWIEPEYYVPILPMVLVNGAEG 885

Query: 863  IGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTG 922
            IGTGWS++IPNYNP+DI AN+R +LNGE +E M PWYRGF G+I K A       Y ++G
Sbjct: 886  IGTGWSTFIPNYNPKDITANLRHMLNGEPLEIMTPWYRGFRGSITKVAPDR----YKISG 941

Query: 923  IIEEVNETTLRIKELPIRRWTQDYREFLESII---DQNDSFIRGFRQYSDDTTVDFEVFL 979
            II ++ E  + I ELPIR WTQD +E+LE+ +   ++   FI  +  +  +  V F V L
Sbjct: 942  IINQIGENKVEITELPIRFWTQDMKEYLEAGLVGTEKIRKFIVDYESHHGEGNVHFNVTL 1001

Query: 980  SEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEK 1039
            +E  M     E L  KFKL+ T +TSNM  FD+ G IKKYD+ E IL EF+ +RL  Y++
Sbjct: 1002 TEAGMKEALNESLEVKFKLSRTQATSNMIAFDASGRIKKYDSVEDILTEFYEVRLRTYQR 1061

Query: 1040 RKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF--PKNSK 1097
            RK+  +  LE    +  N+ RFI  ++ GE+VV+ +K+ DL++EL++K F P   PK   
Sbjct: 1062 RKEHMVNELEKRFDRFSNQARFIHMIIEGELVVSKKKKKDLIVELKEKKFQPISKPKKGH 1121

Query: 1098 SIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEE 1157
             ++  V  A  E E+S    +V     S  Y+YLLSM + +LT E+   LL  +D++  E
Sbjct: 1122 LVDLEVENALAEEEQS---GDVSQDEDSDAYNYLLSMPLWSLTYERYVELLKKKDEVMAE 1178

Query: 1158 VDDLRKATPESLWVKDLDAL---------DMQ---LDELDKSDARAEEERMKIKGNGNGD 1205
            +D L K TP+ LW+ DLDA          D+Q   L+E   S       + K +G   G 
Sbjct: 1179 LDALIKKTPKELWLHDLDAFEHAWNKVMDDIQREMLEEEQSSRDFVNRTKKKPRGKSTGT 1238

Query: 1206 AGPKIVAKRAPKNARKNDKKSNNARAT 1232
              P+ +A  +   A K +  S +  +T
Sbjct: 1239 RKPRAIAGSSSSTAVKKEASSESKPST 1265


>gi|388584015|gb|EIM24316.1| DNA topoisomerase II [Wallemia sebi CBS 633.66]
          Length = 1322

 Score = 1239 bits (3207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1205 (51%), Positives = 817/1205 (67%), Gaps = 59/1205 (4%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E YQK SQLEH+L RPD YIGS   H    W+++EE+K ++ + IS VPGLYKI DEILV
Sbjct: 42   ETYQKLSQLEHVLKRPDMYIGSCMSHEDKHWVFDEETKALVEKDISIVPGLYKIMDEILV 101

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNK RDP+MD +KV ID+E + I +HN+G G+PVEIH +E +Y+PELIFG LLTSSN
Sbjct: 102  NAADNKTRDPRMDLLKVEIDRESNKIHIHNNGKGIPVEIHSKEKIYIPELIFGSLLTSSN 161

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD+ KK TGGRNG+GAKLTNI+STEF +ETAD +  KK+KQ F NNMG +  P I+   
Sbjct: 162  YDDDDKKLTGGRNGFGAKLTNIYSTEFTVETADSEGGKKFKQTFRNNMGDRETPKITSNS 221

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
             G+ +TK++FKPDLA+F M  + DD+ ALM KRV D+AGCL   VKV LNG R+P+++F 
Sbjct: 222  RGEEYTKITFKPDLARFGMDKISDDMYALMTKRVYDMAGCL-PGVKVYLNGTRLPIRNFK 280

Query: 269  EYVDMYPKSV------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            +YV+MY  S             T  HERVN+RWE+   LS+G F++VSFVN IAT KGGT
Sbjct: 281  QYVEMYVTSTIDNEGESSTKKPTIIHERVNDRWEVAFALSDGVFREVSFVNSIATTKGGT 340

Query: 317  HVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            HVD+V NQ+   +  ++ KKNK ANV A  +KN +WVFVN++I+NPAFDSQTKETLTL+ 
Sbjct: 341  HVDHVTNQITTKLGEIIKKKNKGANVTAGKMKNQMWVFVNSMIENPAFDSQTKETLTLKA 400

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            + FGSKC LSE+F KKV +KSGIV+ +L WA F   + + K D    +    I   E+AN
Sbjct: 401  TQFGSKCPLSEDFHKKV-SKSGIVDNILDWAKFDADRQMAKGDTKTKKSKVSIKDYEEAN 459

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG R   +CTLILTEG SAK LAM+G  VVGRD +GVFPLRGKLLNVR+AS   ++NN+
Sbjct: 460  KAGSREGHKCTLILTEGLSAKTLAMSGSQVVGRDYYGVFPLRGKLLNVRDASHTSIMNNA 519

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI +IK I+GL    EY ++  LRYG +MIMTDQ                          
Sbjct: 520  EITSIKTIIGLAHKKEYKSITELRYGSIMIMTDQ-------------------------- 553

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAW 616
              DHDGSHIKGLLIN+   F+PSLLKIP FLVEFITPI+K   +N +V SF+++P++E W
Sbjct: 554  --DHDGSHIKGLLINYFDHFYPSLLKIPGFLVEFITPIIKLFKRNKEV-SFFTIPEFEHW 610

Query: 617  KESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKK 676
            K         W +KYYKGLGTS+ +E ++YF+ +  H+  F    + D E I++AF+KK+
Sbjct: 611  KAE-NDEGRGWRLKYYKGLGTSSDEEARQYFKALDRHRIPFSATQEGDRELIDMAFNKKR 669

Query: 677  IEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKI 736
             E RK+WL  + P   LDQ  + + Y DF+NKELILFSMAD  RSIPSMVDG KPGQRKI
Sbjct: 670  TEDRKEWLRGYNPRTFLDQDIEELSYKDFINKELILFSMADNARSIPSMVDGFKPGQRKI 729

Query: 737  LFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQ 796
            L+ + KRN   E KVAQ    V+E++AYHHGE  L  TI+GMAQ+FVGSNN+N+L PNGQ
Sbjct: 730  LYGTIKRNLKNEIKVAQLGMSVAENTAYHHGETILFQTIVGMAQNFVGSNNLNILSPNGQ 789

Query: 797  FGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVL 856
            FG+R +GGKDAA+ARYIFT +  ITR +F  DDD +L YL ED + IEP WY+PIIP VL
Sbjct: 790  FGSRREGGKDAAAARYIFTAIPRITRTIFHPDDDPILTYLKEDDEWIEPEWYVPIIPMVL 849

Query: 857  VNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGV 916
            VNG++GIGTGWS+ IPNYNP D+VAN+RR LN + ++PM PWYRGF G IE+ ++     
Sbjct: 850  VNGADGIGTGWSTTIPNYNPSDLVANIRRKLNNQDIQPMIPWYRGFTGNIERVSNDR--- 906

Query: 917  TYTVTGIIEEVNETTLRIKELPIRRWTQDYRE----FLESIIDQNDSFIRGFRQYSDDTT 972
             +   GIIE++++  +RI ELP+R WT  Y+E          D+    I+ + ++   TT
Sbjct: 907  -FKNQGIIEQIDDDKVRITELPVRVWTVPYKEEKLKLWVQGSDKQQPLIKDYEEHDTTTT 965

Query: 973  VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
            V+F V L +  M     +GL + FKL ++I+TSN+  F+S G IKKY  PE+ILEEFF+I
Sbjct: 966  VEFIVTLEKNQMKTALSKGLHEYFKLNSSIATSNIVCFNSDGKIKKYTAPEEILEEFFYI 1025

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            RL++Y+ RK  Q+  L +   ++ N+ RFI  +++ E++++NRKR D++ ELR K FTP+
Sbjct: 1026 RLKYYQLRKDYQMHELGIAFDRISNQARFIKMIIDRELIISNRKRKDIVDELRAKKFTPY 1085

Query: 1093 PKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRD 1152
            PK  +           + EE EEN   V G    DYDYLLSM I +LT+E+++ LL  RD
Sbjct: 1086 PKQKEKKRPGEVEIIGQDEEEEEN---VGGAG--DYDYLLSMQISSLTMERMEQLLKQRD 1140

Query: 1153 KLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVA 1212
               EE+++L K  P+ LW  DLD    + + L + D   E+ +   KG+ N  A  K V 
Sbjct: 1141 SKEEELNNLAKLQPQDLWNVDLDKFMEEWEALLEKD--IEDAKKVEKGSKNKGATAKRVQ 1198

Query: 1213 KRAPK 1217
            K   K
Sbjct: 1199 KAMKK 1203


>gi|5121|emb|CAA27857.1| unnamed protein product [Schizosaccharomyces pombe]
          Length = 1431

 Score = 1238 bits (3202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1227 (50%), Positives = 843/1227 (68%), Gaps = 64/1227 (5%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQ+ +  EH+L RPDTYIGSIE  T  +W+++ E   + ++ ++YVPGLYKIFDEI+VNA
Sbjct: 24   YQRLTPREHVLRRPDTYIGSIEPTTSEMWVFDSEKNKLDYKAVTYVPGLYKIFDEIIVNA 83

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M+ +KV +D E ++IS++N+G G+P+EIH +E +Y+PELIFG+LLTSSNYD
Sbjct: 84   ADNKVRDPNMNTLKVTLDPEANVISIYNNGKGIPIEIHDKEKIYIPELIFGNLLTSSNYD 143

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            DN KK TGGRNGYGAKL NIFSTEF++ETAD +R+KKYKQ + +NM +KSEP I+  K+ 
Sbjct: 144  DNQKKVTGGRNGYGAKLCNIFSTEFVVETADKERMKKYKQTWYDNMSRKSEPVITSLKKP 203

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D +TK++FKPDLAKF M  ++DD+V+++K+R+ D+AG + +  KV LN  R+ +  F +Y
Sbjct: 204  DEYTKITFKPDLAKFGMDKIDDDMVSIIKRRIYDMAGTV-RETKVYLNNERISISGFKKY 262

Query: 271  VDMYPKSVTR--------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVA 322
            V+MY  S T+         +E VN+RW++   +S+GQF+QVSFVN I+TI+GGTHV+YVA
Sbjct: 263  VEMYLASDTKPDEEPPRVIYEHVNDRWDVAFAVSDGQFKQVSFVNNISTIRGGTHVNYVA 322

Query: 323  NQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSK 382
            N++ + +  VV K+NK A VKA  +KN++ VFVN  I+NP+FDSQTKETLT + S+FGS+
Sbjct: 323  NKIVDAIDEVVKKENKKAPVKAFQIKNYVQVFVNCQIENPSFDSQTKETLTTKVSAFGSQ 382

Query: 383  CELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
            C LS++FLK +  KS +VE +L +A  K  + L K DG     + G++KLEDAN AG + 
Sbjct: 383  CTLSDKFLKAI-KKSSVVEEVLKFATAKADQQLSKGDGGLRSRITGLTKLEDANKAGTKE 441

Query: 443  SEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIK 502
            S +C LILTEGDSAK+LA++GLSVVGRD +GVFPLRGKLLNVREAS +Q+LNN EI  IK
Sbjct: 442  SHKCVLILTEGDSAKSLAVSGLSVVGRDYYGVFPLRGKLLNVREASHSQILNNKEIQAIK 501

Query: 503  KILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDG 562
            KI+G      Y +VK LRYGHLMIMTDQ                            DHDG
Sbjct: 502  KIMGFTHKKTYTDVKGLRYGHLMIMTDQ----------------------------DHDG 533

Query: 563  SHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGG 622
            SHIKGL+IN++ S +PSLL+IP FL++FITPI+K T  N +V +FY++P+YE WKE+   
Sbjct: 534  SHIKGLIINYLESSYPSLLQIPGFLIQFITPIIKCTRGN-QVQAFYTLPEYEYWKEA-NN 591

Query: 623  NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
            N   W IKYYKGLGTS   + K YF ++  H K F    ++D E IE+AF+KKK + RK+
Sbjct: 592  NGRGWKIKYYKGLGTSDHDDMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKE 651

Query: 683  WLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
            WL  + PG ++D  +  I   DF+N+ELI FSMAD  RSIPS+VDGLKPGQRK+++  FK
Sbjct: 652  WLRTYRPGIYMDYTQPQIPIDDFINRELIQFSMADNIRSIPSVVDGLKPGQRKVVYYCFK 711

Query: 743  RNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQ 802
            RN + E KV++ +GYV+  +AYHHGE S+  TI+ +AQ+FVGSNNINLL PNGQFGTR++
Sbjct: 712  RNLVHETKVSRLAGYVASETAYHHGEVSMEQTIVNLAQNFVGSNNINLLMPNGQFGTRSE 771

Query: 803  GGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEG 862
            GGK+A+++RY+ T LSP+ R LF  +DD+LL+Y N++GQ IEP +Y+PI+P VLVNG+EG
Sbjct: 772  GGKNASASRYLNTALSPLARVLFNSNDDQLLNYQNDEGQWIEPEYYVPILPMVLVNGAEG 831

Query: 863  IGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTG 922
            IGTGWS++IPNYNP+DI AN+R +LNGE +E M PWYRGF G+I K A       Y ++G
Sbjct: 832  IGTGWSTFIPNYNPKDITANLRHMLNGEPLEIMTPWYRGFRGSITKVAPDR----YKISG 887

Query: 923  IIEEVNETTLRIKELPIRRWTQDYREFLESII---DQNDSFIRGFRQYSDDTTVDFEVFL 979
            II ++ E  + I ELPIR WTQD +E+LE+ +   ++   FI  +  +  +  V F V L
Sbjct: 888  IINQIGENKVEITELPIRFWTQDMKEYLEAGLVGTEKIRKFIVDYESHHGEGIVHFNVTL 947

Query: 980  SEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEK 1039
            +E  M     E L  KFKL+ T +TSNM  FD+ G IKKYD+ E IL EF+ +RL  Y++
Sbjct: 948  TEAGMKEALNESLEVKFKLSRTQATSNMIAFDASGRIKKYDSVEDILTEFYEVRLRTYQR 1007

Query: 1040 RKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF--PKNSK 1097
            RK+  +  LE    +  N+ RFI  ++ GE+VV+ +K+ DL++EL++K F P   PK   
Sbjct: 1008 RKEHMVNELEKRFDRFSNQARFIHMIIEGELVVSKKKKKDLIVELKEKKFQPISKPKKGH 1067

Query: 1098 SIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEE 1157
             ++  V  A  E E+S    +V     S  Y+YLLSM + +LT E+   LL  +D++  E
Sbjct: 1068 LVDLEVENALAEEEQS---GDVSQDEDSDAYNYLLSMPLWSLTYERYVELLKKKDEVMAE 1124

Query: 1158 VDDLRKATPESLWVKDLDAL---------DMQ---LDELDKSDARAEEERMKIKGNGNGD 1205
            +D L K TP+ LW+ DLDA          D+Q   L+E   S       + K +G   G 
Sbjct: 1125 LDALIKKTPKELWLHDLDAFEHAWNKVMDDIQREMLEEEQSSRDFVNRTKKKPRGKSTGT 1184

Query: 1206 AGPKIVAKRAPKNARKNDKKSNNARAT 1232
              P+ +A  +   A K +  S +  +T
Sbjct: 1185 RKPRAIAGSSSSTAVKKEASSESKPST 1211


>gi|393219003|gb|EJD04491.1| DNA topoisomerase II [Fomitiporia mediterranea MF3/22]
          Length = 1509

 Score = 1237 bits (3201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1168 (52%), Positives = 817/1168 (69%), Gaps = 57/1168 (4%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT  E Y+K +  EH++ RPD+YIGS+E  TQ++W+Y+ ++K M+ R +SYVPG  KI D
Sbjct: 34   KTASEHYKKLTPREHVIARPDSYIGSVETITQSMWVYDSDAKRMVFREVSYVPGFLKIVD 93

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EI+VNAADNK  DP MD +KV I+ +   ISV+N+G G+P+E+H++E + +PE+IFGHLL
Sbjct: 94   EIIVNAADNKINDPNMDTIKVNINAKEGTISVYNNGRGIPIEMHEKEKIMIPEMIFGHLL 153

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TS NYDD +KK TGGRNGYGAKL NI+STEF +ETAD    +KYKQ +T NM    +  I
Sbjct: 154  TSGNYDDTIKKLTGGRNGYGAKLANIYSTEFTLETADKNTAQKYKQTWTKNMSVCGKAKI 213

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +K  +G+ +T+VSF PD  +F M  ++ D +AL+KKRV DLAG + K +KV LN  R+ +
Sbjct: 214  TKNSKGEEFTRVSFTPDFERFKMRGMDADALALLKKRVYDLAGTV-KDIKVYLNDERLKI 272

Query: 265  KSFAEYVDMYPKSV----------------TRFHERVNERWEICVTLSEGQFQQVSFVNG 308
            K+F +YV+MY  S                 +  +E++  RWEI   +S+G FQQVSF N 
Sbjct: 273  KNFKQYVEMYLSSAAAEAAGASGGAAQAKPSVIYEQLGPRWEIAFAVSDGSFQQVSFANS 332

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQT 368
            IAT KGGTHV+Y+ANQ+  H+++ + +KNK A VK   +KNH+W+FVNALI+NP+FDSQT
Sbjct: 333  IATTKGGTHVEYIANQITKHLISTIQRKNKGATVKPAQIKNHMWIFVNALIENPSFDSQT 392

Query: 369  KETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRG 428
            KETLT     FG+K  +SE+F+KKV  K+ +VE +L+WA FK  + +KK DG K   + G
Sbjct: 393  KETLTKTAGGFGTKPTISEDFMKKVM-KTSLVENVLNWAKFKADQQIKKTDGAKRSRLLG 451

Query: 429  ISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREAS 488
            I+KL DAN AG R + +CTLILTEGDSAKALA+AGL VVGR+ FGVFPLRGK+LNVREA 
Sbjct: 452  ITKLADANNAGTREASKCTLILTEGDSAKALAVAGLGVVGRNNFGVFPLRGKMLNVREAK 511

Query: 489  SNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAW 548
             +Q++ N EI N+KKILGL+   EY ++ SLRYG LMIMTDQ                  
Sbjct: 512  HDQIMKNEEIQNVKKILGLQHNKEYKDIASLRYGRLMIMTDQ------------------ 553

Query: 549  ITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFY 608
                      DHDGSHIKGLLINF+  F+PSLLK+P FLVEF+TPIV+ T K  + + F+
Sbjct: 554  ----------DHDGSHIKGLLINFLDHFYPSLLKVPEFLVEFVTPIVRVT-KGKQRIDFF 602

Query: 609  SMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAI 668
            ++P++E W ++   ++  WS KYYKGLGTS   + ++YF N+  H   F    + D E I
Sbjct: 603  TLPEFEKW-QAETPDSHKWSSKYYKGLGTSKDSDARDYFSNMGKHMIPFATTQEGDRELI 661

Query: 669  ELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
            ELAFSKKK + RK+WL QF PG +LD     I YSDF+NKELILFSMAD  RSIPS+ DG
Sbjct: 662  ELAFSKKKADERKEWLRQFRPGTYLDHNVDEIPYSDFINKELILFSMADNIRSIPSVADG 721

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKPGQRK+++  FKR   KE KVAQ  GY+SEH+AYHHGEQSL  TI+ +AQDFVGSNN+
Sbjct: 722  LKPGQRKVIWGCFKRKLKKEIKVAQLVGYISEHAAYHHGEQSLTMTIVNLAQDFVGSNNM 781

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            NLL PNGQ+GTR+QGGKD ASARYI+T  +PI+R +F + DD LL+   EDGQ IEP +Y
Sbjct: 782  NLLLPNGQYGTRDQGGKDHASARYIYTEPAPISRLVFHQSDDALLNEQKEDGQVIEPEFY 841

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            +PI+P VLVNG+EGIGTGWS+ +P+YNP DIV N++RL+ GE + PM+PW+RGF GTI+K
Sbjct: 842  VPILPLVLVNGAEGIGTGWSTTVPSYNPVDIVDNLKRLMKGEELVPMNPWWRGFNGTIKK 901

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII-DQNDSFIRGFRQY 967
            T   +    + VTG+++++N+TT+ I ELPI +WTQ ++  LES+  ++ D  ++ ++++
Sbjct: 902  TGDNK----FEVTGVVKKLNDTTVEITELPIHKWTQAFKAELESMCGEKGDGAVKDYKEH 957

Query: 968  SDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILE 1027
             D+  V F V ++ + + + + +GL + FKLT+ ISTSNM  FD +G IKKY+TPE+ILE
Sbjct: 958  HDNRNVHFVVNMNAKELEKAEAQGLEEYFKLTSKISTSNMICFDFEGKIKKYNTPEEILE 1017

Query: 1028 EFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK 1087
            +FF +RL  Y+KRK      L+LE  KL N+ RF+  +V  E+VV+ RK+ D++ +LR+K
Sbjct: 1018 DFFPVRLGLYQKRKDYLANELQLEHEKLSNQARFVQMIVKKELVVSGRKKVDIVADLRKK 1077

Query: 1088 GFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGL 1147
             F PFPK +K   A  AG T++  E  E  E   G  + D+DYLL M I  LT EK++ L
Sbjct: 1078 NFRPFPKVAK---AKAAGETEDALEDTEAEEQETGT-TTDFDYLLGMPIYNLTHEKIEKL 1133

Query: 1148 LADRDKLNEEVDDLRKATPESLWVKDLD 1175
            L    +   E+  L + TP  +W  DLD
Sbjct: 1134 LEQARQKETELMTLLELTPSQIWNTDLD 1161


>gi|392572043|gb|EIW65215.1| type II DNA topoisomerase [Trametes versicolor FP-101664 SS1]
          Length = 1536

 Score = 1236 bits (3199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/1184 (51%), Positives = 823/1184 (69%), Gaps = 62/1184 (5%)

Query: 15   ANVVGPTAPN----KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIH 70
            A + GP+AP     KT  EMY K SQLEHIL RPD+YIGS+E  TQ +W ++ E+K M+H
Sbjct: 79   APLAGPSAPTNGKKKTASEMYTKLSQLEHILKRPDSYIGSVETITQMMWTWDSENKRMVH 138

Query: 71   RTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQE 130
            R I YVPG +KI DEILVNAADNK  D  MD +KV ID E++ I+V+N+G G+P+E+H++
Sbjct: 139  REIKYVPGFFKIVDEILVNAADNKINDASMDTIKVNIDVENNTITVYNNGRGIPIEMHKK 198

Query: 131  EGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQ 190
            E +Y+PELIFGHLL+SSNYDD+ KK TGGRNGYGAKL NI+STEF ++TAD    +KY Q
Sbjct: 199  EKIYIPELIFGHLLSSSNYDDDEKKLTGGRNGYGAKLANIYSTEFTVDTADKNTSQKYSQ 258

Query: 191  VFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLG 250
             +T NM K  +  I+K   G+ +T+V+FKPDL +F M  +++D V+L+KKRV DLAG   
Sbjct: 259  TWTENMSKIGKAKITKNGRGEEYTRVTFKPDLKRFGMDSIDEDTVSLLKKRVHDLAGTT- 317

Query: 251  KSVKVELNGHRVPVKSFAEYVDMYPKSVTR----------------FHERVNERWEICVT 294
            K VKV LN  R+ +K+F +YV+++  S  +                 +E +  RWE+   
Sbjct: 318  KDVKVFLNDERLKIKNFKQYVELFINSAAQEAADVSGGAAQVKPSIIYEPIGTRWEVAFA 377

Query: 295  LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVF 354
            +S+G FQQVSF N I+T KGGTHV+Y+A+Q+A  ++  ++KKNK A +K   +KNH+W+F
Sbjct: 378  VSDGSFQQVSFANSISTSKGGTHVNYMADQIAKALITSISKKNKAATIKPAQIKNHMWIF 437

Query: 355  VNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKD 414
            VNALI+NP FDSQTKETLTL  S FG++  LSE+F+KKV AKS IV+ +L+WA FK  + 
Sbjct: 438  VNALIENPTFDSQTKETLTLPASKFGTRPTLSEDFMKKV-AKSSIVDHVLNWAKFKADQQ 496

Query: 415  LKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGV 474
            LKK DG +   + G++KL DAN AG R +  CTLILTEGDSA+ALA+AGL VVGRD FGV
Sbjct: 497  LKKTDGNRRTRLTGMTKLSDANNAGTRKAGDCTLILTEGDSARALAIAGLGVVGRDNFGV 556

Query: 475  FPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLA 534
            FPLRGKLLNVR+A  +Q++ N EI NIKKI+GL+   EY +V SLRYG LM+MTDQ    
Sbjct: 557  FPLRGKLLNVRDAKHDQIMKNEEIQNIKKIMGLQHNKEYTDVNSLRYGRLMLMTDQ---- 612

Query: 535  PLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPI 594
                                    DHDGSHIKGLLIN++  F+PSLLK+P FLVEFITP+
Sbjct: 613  ------------------------DHDGSHIKGLLINYLDHFYPSLLKLPKFLVEFITPV 648

Query: 595  VKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHK 654
            V+   K   +++FY++P+YE W E    ++  W  KYYKGLGTS  ++ ++YF+++  H 
Sbjct: 649  VRVW-KGKTIINFYTIPEYEMWLEDTP-DSHKWEHKYYKGLGTSKDEDARDYFRDMKRHM 706

Query: 655  KDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFS 714
              F  + D D E IELAFSKKK + RK+WL QF+PG +LD  ++ I   DF+N+ELILFS
Sbjct: 707  IPFSTQQDGDRELIELAFSKKKADDRKEWLRQFKPGTYLDHTQREIPLKDFINRELILFS 766

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
            MAD  RSIPS+ DGLKPGQRK+++  FKRN  +E KVAQ  GYVSE SAYHHGE SL +T
Sbjct: 767  MADNIRSIPSVADGLKPGQRKVIWSCFKRNLKREIKVAQLVGYVSETSAYHHGEASLMAT 826

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +AQD+VGSNN+NLL PNGQFGTR+QGGKD A+ARYI+T L+P+ R +    DD +L 
Sbjct: 827  IINLAQDYVGSNNMNLLLPNGQFGTRDQGGKDHAAARYIYTELAPVIRTVMHPADDAVLS 886

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            Y  +DG+ +EP WYMP+IP VLVNG+EGIGTGWS+ +P++NP DIVAN+RRL+NGE   P
Sbjct: 887  YQQDDGRSVEPEWYMPVIPLVLVNGAEGIGTGWSTSVPSFNPEDIVANLRRLMNGEEQVP 946

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII 954
            M PW+RGF G I+KT   +    Y V G I +V+++T+ I ELPI +WTQ ++  LE + 
Sbjct: 947  MLPWWRGFSGAIKKTGDNK----YDVLGTITKVDDSTIEITELPIHKWTQTFKAELEVMC 1002

Query: 955  -DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
             ++ D  ++ +++Y ++  V F V ++E+ M + +++G  + FKLTT +ST+NM  FD  
Sbjct: 1003 GEKGDGPVKDYKEYHNNMNVHFVVTMTEKGMEQAEKQGFHEFFKLTTKVSTANMVCFDFD 1062

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
              IKKY   E+I+E+F+  RL +Y+KRK      L+ +L +L N+ RF+  +++ E++VN
Sbjct: 1063 SKIKKYSAAEEIIEDFYPRRLAYYQKRKDFLANELQTQLDRLNNQARFVKMIIDKELIVN 1122

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLS 1133
            NRK+ D++ ELR+K F PFPK +K   A V G  ++  E E+  +    V   DYDYLL 
Sbjct: 1123 NRKKADIVAELRKKQFRPFPKVAK---AKVHGEIEDVVEDEDGSDFEGNV--TDYDYLLG 1177

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            MAI +LT EK+  LL    +   E+  L + TP  +W  DLDA 
Sbjct: 1178 MAIWSLTKEKIDKLLQQAKEKETELLTLLELTPIQIWQTDLDAF 1221


>gi|449328926|gb|AGE95201.1| DNA topoisomerase II [Encephalitozoon cuniculi]
          Length = 1144

 Score = 1236 bits (3197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1173 (53%), Positives = 821/1173 (69%), Gaps = 87/1173 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE YQKK+ +EHILLRPDTYIGS+EK  Q +++++EE+  MI+++I YVPGLYKIFD
Sbjct: 2    KTIEETYQKKTPVEHILLRPDTYIGSVEKEAQEMYVWDEENGRMIYKSIEYVPGLYKIFD 61

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EI+VNAADNK RDPKMD +KV ID E + ISV+N+G G+PV IH+EE VYVPELIFG+LL
Sbjct: 62   EIIVNAADNKIRDPKMDVIKVSIDPEGNEISVYNNGKGIPVRIHKEENVYVPELIFGNLL 121

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNY+D+ KK TGGRNGYGAKL NIFS EF++ETAD +  K Y+Q + +NMG K +P I
Sbjct: 122  TSSNYNDDEKKVTGGRNGYGAKLCNIFSKEFVVETADCEVKKYYRQRYRDNMGVKEDPEI 181

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            S+  +GD +TK++FKPDL +F MT L+DD+VAL++KRV DLAG + K VK+ LN  R+ V
Sbjct: 182  SRYTKGD-FTKITFKPDLRRFKMTRLDDDIVALLRKRVYDLAGIV-KDVKIFLNEKRIEV 239

Query: 265  KSFAEYVDMY-PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
            K F EYV +Y P   +  H+ +N+RWE+ +T SE QFQQVSFVNGI T KGGTHV +V  
Sbjct: 240  KGFKEYVKLYIPPGASVVHQVINDRWELALTTSEEQFQQVSFVNGICTTKGGTHVSHVVE 299

Query: 324  QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
            ++ + ++  + KK K  +V+   V++ ++VF+N+LIDNPAFDSQTKE LTLR S+FGSKC
Sbjct: 300  RIVDPLVEAIQKKEKGLSVRPFQVRSCMFVFINSLIDNPAFDSQTKENLTLRASAFGSKC 359

Query: 384  ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            E   +F+K +   + IV+ + S+A  KQS+ LKK DG KT  + GI KLEDAN AG   S
Sbjct: 360  EPMGDFVKSIIKNTPIVQKITSFAKAKQSQQLKKTDGAKTSRLSGIPKLEDANFAGTSRS 419

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSAK LA+AGLSVVGRD +GVFPLRGKLLNVREAS  Q++ N+EI +IKK
Sbjct: 420  KDCTLILTEGDSAKTLAVAGLSVVGRDAYGVFPLRGKLLNVREASHKQIMENAEISSIKK 479

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+    Y +V SLRYGH+MIMTDQ                            DHDGS
Sbjct: 480  ILGLQHNKVYEDVSSLRYGHVMIMTDQ----------------------------DHDGS 511

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
            HIKGL+INF+  F+PSLLKIP FL EFITPI++AT K G+V  F+++P+YE +K+    N
Sbjct: 512  HIKGLIINFLDHFYPSLLKIPGFLQEFITPIIRATKK-GQVRDFFTLPEYEEFKK----N 566

Query: 624  ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
               W+IKYYKGLGTSTS + K+YF N+ +H K F     +D E I+LAF+KKK +ARK W
Sbjct: 567  EDGWNIKYYKGLGTSTSADAKQYFSNLPVHVKSFTPLAAEDKELIDLAFNKKKADARKTW 626

Query: 684  LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
            LL F PG  LDQ +  I  SDFVNKELILFSMAD  RSIPS+VDGLKPGQRK++F  FKR
Sbjct: 627  LLNFAPGTFLDQSQTQISISDFVNKELILFSMADNIRSIPSLVDGLKPGQRKVIFSCFKR 686

Query: 744  NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
            N   E KVAQ  GYVSE SAYHHGEQSL STI+ +AQDFVGSNNINLL P GQFG+R QG
Sbjct: 687  NLRSEIKVAQLVGYVSEQSAYHHGEQSLCSTIVNLAQDFVGSNNINLLLPIGQFGSRLQG 746

Query: 804  GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
            GKDAAS RYIFT LSP+TR +F ++DD +L+YLN+D   IEP +Y+PIIP VLVNG+EGI
Sbjct: 747  GKDAASPRYIFTSLSPLTRMIFNENDDAILNYLNDDNFSIEPEFYVPIIPMVLVNGAEGI 806

Query: 864  GTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGI 923
            GTGWS+ IPN+NP D+V N+RR++ GE    M P+YR F GTIEK    +    + V+GI
Sbjct: 807  GTGWSTSIPNFNPVDVVENIRRMIRGEDPVEMVPYYRNFRGTIEKIGEGK----FQVSGI 862

Query: 924  IEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEES 983
             E   +  L I ELP+  WT +Y+EFLES++    +  R F++Y  + TV F V LS+  
Sbjct: 863  YE--GDMDLEITELPVGTWTLNYKEFLESLVQAGVA--RDFKEYHTEKTVSFTVKLSKP- 917

Query: 984  MMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKV 1043
                     +   KL +TI+ +NM  FD    IKKY TP++IL+EF+ +RL +Y  RK+ 
Sbjct: 918  ---------VSNLKLNSTITVNNMVCFDENLRIKKYATPQEILKEFYGVRLRYYLIRKEN 968

Query: 1044 QLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVV 1103
             L+ +  EL KLENKVRFI  V  GE+V++ R++ +++ +L  +G+              
Sbjct: 969  MLKVMREELEKLENKVRFIKEVSMGELVISRRRKGEVIFDLESRGYA------------- 1015

Query: 1104 AGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
                                ++ DY+YLLSM+I +LT+E+++ L  +  K   E + L  
Sbjct: 1016 --------------------RADDYEYLLSMSILSLTVERIERLSNEHAKRLSEYNQLMG 1055

Query: 1164 ATPESLWVKDLDALDMQLDELDKSDARAEEERM 1196
             TP+ LW++DL+  + +   + +++AR  ++ +
Sbjct: 1056 KTPKELWLEDLEVFEKEYLRIAENEAREYDDEL 1088


>gi|19074112|ref|NP_584718.1| DNA TOPOISOMERASE II [Encephalitozoon cuniculi GB-M1]
 gi|19068754|emb|CAD25222.1| DNA TOPOISOMERASE II [Encephalitozoon cuniculi GB-M1]
          Length = 1144

 Score = 1236 bits (3197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 629/1173 (53%), Positives = 822/1173 (70%), Gaps = 87/1173 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE YQKK+ +EHILLRPDTYIGS+EK  Q +++++EE+  M++++I YVPGLYKIFD
Sbjct: 2    KTIEETYQKKTPVEHILLRPDTYIGSVEKEAQEMYVWDEENGRMVYKSIEYVPGLYKIFD 61

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EI+VNAADNK RDPKMD +KV ID E + ISV+N+G G+PV IH+EE VYVPELIFG+LL
Sbjct: 62   EIIVNAADNKIRDPKMDVIKVSIDPEGNEISVYNNGKGIPVRIHKEENVYVPELIFGNLL 121

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNY+D+ KK TGGRNGYGAKL NIFS EF++ETAD +  K Y+Q + +NMG K +P I
Sbjct: 122  TSSNYNDDEKKVTGGRNGYGAKLCNIFSKEFVVETADCEVKKYYRQRYRDNMGVKEDPEI 181

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            S+  +GD +TK++FKPDL +F MT L+DD+VAL++KRV DLAG + K VK+ LN  R+ V
Sbjct: 182  SRYTKGD-FTKITFKPDLRRFKMTRLDDDIVALLRKRVYDLAGIV-KDVKIFLNEKRIEV 239

Query: 265  KSFAEYVDMY-PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
            K F EYV +Y P   +  H+ +N+RWE+ +T SE QFQQVSFVNGI T KGGTHV++V  
Sbjct: 240  KGFKEYVKLYIPPGASVVHQVINDRWELALTTSEEQFQQVSFVNGICTTKGGTHVNHVVE 299

Query: 324  QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
            ++ + ++  + KK K  +V+   V++ ++VF+N+LIDNPAFDSQTKE LTLR S+FGSKC
Sbjct: 300  RIVDPLVEAIQKKEKGLSVRPFQVRSCMFVFINSLIDNPAFDSQTKENLTLRASAFGSKC 359

Query: 384  ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            E   +F+K +   + IV+ + S+A  KQS+ LKK DG KT  + GI KLEDAN AG   S
Sbjct: 360  EPMGDFVKSIIKNTPIVQKITSFAKAKQSQQLKKTDGAKTSRLSGIPKLEDANFAGTSRS 419

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSAK LA+AGLSVVGRD +GVFPLRGKLLNVREAS  Q++ N+EI +IKK
Sbjct: 420  KDCTLILTEGDSAKTLAVAGLSVVGRDAYGVFPLRGKLLNVREASHKQIMENAEISSIKK 479

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+    Y +V SLRYGH+MIMTDQ                            DHDGS
Sbjct: 480  ILGLQHNKVYEDVSSLRYGHVMIMTDQ----------------------------DHDGS 511

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
            HIKGL+INF+  F+PSLLKIP FL EFITPI++AT K G+V  F+++P+YE +K+    N
Sbjct: 512  HIKGLIINFLDHFYPSLLKIPGFLQEFITPIIRATKK-GQVRDFFTLPEYEEFKK----N 566

Query: 624  ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
               W+IKYYKGLGTSTS + K+YF N+ +H K F     +D E I+LAF+KKK +ARK W
Sbjct: 567  EDGWNIKYYKGLGTSTSADAKQYFSNLPVHVKSFTPLAAEDKELIDLAFNKKKADARKTW 626

Query: 684  LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
            LL F PG  LDQ +  I  SDFVNKELILFSMAD  RSIPS+VDGLKPGQRK++F  FKR
Sbjct: 627  LLNFAPGTFLDQSQTQISISDFVNKELILFSMADNIRSIPSLVDGLKPGQRKVIFSCFKR 686

Query: 744  NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
            N   E KVAQ  GYVSE SAYHHGEQSL STI+ +AQDFVGSNNINLL P GQFG+R QG
Sbjct: 687  NLRSEIKVAQLVGYVSEQSAYHHGEQSLCSTIVNLAQDFVGSNNINLLLPIGQFGSRLQG 746

Query: 804  GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
            GKDAAS RYIFT LSP+TR +F ++DD +L+YLN+D   IEP +Y+PIIP VLVNG+EGI
Sbjct: 747  GKDAASPRYIFTSLSPLTRMIFNENDDAILNYLNDDNFSIEPEFYVPIIPMVLVNGAEGI 806

Query: 864  GTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGI 923
            GTGWS+ IPN+NP D+V N+RR++ GE    M P+YR F GTIEK    +    + V+GI
Sbjct: 807  GTGWSTSIPNFNPVDVVENIRRMIRGEDPVEMVPYYRNFRGTIEKIGEGK----FQVSGI 862

Query: 924  IEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEES 983
             E   +  L I ELP+  WT +Y+EFLES++    +  R F++Y  + TV F V LS+  
Sbjct: 863  YE--GDMDLEITELPVGTWTLNYKEFLESLVQAGVA--RDFKEYHTEKTVSFTVKLSKP- 917

Query: 984  MMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKV 1043
                     +   KL +TI+ +NM  FD    IKKY TP++IL+EF+ +RL +Y  RK+ 
Sbjct: 918  ---------VSNLKLNSTITVNNMVCFDENLRIKKYATPQEILKEFYGVRLRYYLIRKEN 968

Query: 1044 QLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVV 1103
             L+ +  EL KLENKVRFI  V  GE+V++ R++ +++ +L  +G+              
Sbjct: 969  MLKVMREELEKLENKVRFIKEVSMGELVISRRRKGEVIFDLESRGYA------------- 1015

Query: 1104 AGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
                                ++ DY+YLLSM+I +LT+E+++ L  +  K   E + L  
Sbjct: 1016 --------------------RADDYEYLLSMSILSLTVERIERLSNEHAKRLSEYNQLMG 1055

Query: 1164 ATPESLWVKDLDALDMQLDELDKSDARAEEERM 1196
             TP+ LW++DL+  + +   + +++AR  ++ +
Sbjct: 1056 KTPKELWLEDLEVFEKEYLRIAENEAREYDDEL 1088


>gi|358058373|dbj|GAA95892.1| hypothetical protein E5Q_02550 [Mixia osmundae IAM 14324]
          Length = 1497

 Score = 1235 bits (3195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1224 (50%), Positives = 819/1224 (66%), Gaps = 105/1224 (8%)

Query: 16   NVVGPTAPNKTIEEM----YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR 71
            NVV  T P   +E+     YQK +QLEH+LLRPDTYIGS+E  TQ +WI++     M  +
Sbjct: 61   NVVPSTGPTDKVEKSASAKYQKITQLEHVLLRPDTYIGSVESITQPMWIWDATRSCMAQK 120

Query: 72   TISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEE 131
            TI++VPGL+KIFDEILVNAAD KQ+ P M  +KV ID E   ISV N+G G+ V IH++E
Sbjct: 121  TITFVPGLFKIFDEILVNAADAKQQCPSMSELKVNIDTEKGEISVWNNGMGIEVVIHEKE 180

Query: 132  GVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQV 191
             +Y+PELIFGHLLTSSNYDD+ KKTTGGRNGYGAKL NI+ST F +ETA  K  KKY Q 
Sbjct: 181  NIYIPELIFGHLLTSSNYDDDDKKTTGGRNGYGAKLANIYSTSFTVETACQKSGKKYVQT 240

Query: 192  FTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNM---THLEDDVVALMKKRVVDLAGC 248
            +TNNM  K +  I+  K+G+ +TK++F+PD  +F       L+ D  AL++KRV D+AG 
Sbjct: 241  WTNNMSSKGKAKITDTKKGEAYTKITFRPDFKRFGHMAEAGLDPDTEALLQKRVYDMAGT 300

Query: 249  LGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR---------------------------- 280
            + K V+V LNG ++ V +F +YV++Y ++V                              
Sbjct: 301  V-KDVQVSLNGKKLRVNNFKKYVELYTRAVDEQGNVPTPTKARARSNSVVSATPALSQSQ 359

Query: 281  ---------------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
                                  +E+  ERWE+  T+S+G F QVSFVN IAT KGGTHV+
Sbjct: 360  SQATDLAGAPPTGKSAQPGKIIYEQFGERWEVAFTVSDGDFNQVSFVNSIATTKGGTHVE 419

Query: 320  YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
            +VA Q+   ++A V KKNK+ANVK+  ++ HLW+F+N L++NP+FDSQTKE L L    F
Sbjct: 420  HVAKQLTEGLIAAVKKKNKHANVKSSQIRPHLWIFINCLVENPSFDSQTKENLILPVGKF 479

Query: 380  GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG 439
            GS+C++SEEF+KK+T KSG+V+ +L+WA FK+ + LKK DG K   + GISKLEDAN AG
Sbjct: 480  GSRCKVSEEFIKKIT-KSGVVDNVLNWAKFKEEQQLKKTDGHKRSRITGISKLEDANQAG 538

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
             +N   CTLILTEGDSAKALA++GL VVGRD FGVFPLRGKLLNVRE+    + +N EI 
Sbjct: 539  TKNGRNCTLILTEGDSAKALAVSGLEVVGRDTFGVFPLRGKLLNVRESQGKTLTDNIEIN 598

Query: 500  NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
             +K+I+GL+ G  Y +V SLRYGHLMIMTDQ                            D
Sbjct: 599  AVKQIMGLQHGKTYESVDSLRYGHLMIMTDQ----------------------------D 630

Query: 560  HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKES 619
            HDGSHIKGL+INF+  F+PSLL+IP FLVEFITPIVK +    +  +F++MP+YEAWK  
Sbjct: 631  HDGSHIKGLIINFLDYFFPSLLRIPGFLVEFITPIVKISRARQE-RAFFTMPEYEAWKAE 689

Query: 620  LGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEA 679
               +   W IKYYKGLGTST+ + ++YF ++  H+  F   DD D   I++AF+KKK + 
Sbjct: 690  -NNDGRGWDIKYYKGLGTSTAADARKYFGDMDSHRLGFRVSDDADRSLIDMAFNKKKADD 748

Query: 680  RKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFC 739
            RK WL  F PG  LD   K I  SDFVN+ELIL+SMAD  RSIPS+VDG KPGQRK+LF 
Sbjct: 749  RKDWLASFIPGTFLDHSIKQIPISDFVNRELILYSMADNIRSIPSLVDGFKPGQRKVLFG 808

Query: 740  SFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGT 799
             FKRN  KE KVAQ  GYVSE SAYHHGE SL  TI+G+AQ+FVGSNNINLL PNGQFGT
Sbjct: 809  CFKRNLKKEIKVAQLGGYVSEQSAYHHGEASLYGTIVGLAQNFVGSNNINLLDPNGQFGT 868

Query: 800  RNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNG 859
            R QGGKDAASARYIFT ++ ITR +F   DD LL YL++DGQ IEP+WYMP+IP VLVNG
Sbjct: 869  RLQGGKDAASARYIFTNVAQITRTIFHPADDNLLTYLSDDGQSIEPSWYMPVIPMVLVNG 928

Query: 860  SEGIGTGWSSYIPNYNPRDIVANVR-RLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTY 918
            S+GIGTGWSS IP YNP DI+AN+R +L + +   P+ PWYRG+ G I +  + +    +
Sbjct: 929  SDGIGTGWSSTIPTYNPADIIANLRAKLADKDERIPLLPWYRGYKGEIVRLGADK----F 984

Query: 919  TVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII---DQNDSFIRGFRQYSDDTTVDF 975
               G+  + +E TL I ELP+R WTQ Y+E LE+ I   ++  + I+ +++Y  +TTV F
Sbjct: 985  KCLGVWSQPDEDTLEITELPVRVWTQTYKELLEAWIQGTEKAPALIKDYKEYHANTTVHF 1044

Query: 976  EVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLE 1035
            ++ L+ +      ++G+ K FKL++ +ST NM  FD +G I+KY TPE IL+ F+  RL 
Sbjct: 1045 KLQLTAKGKEAIAKDGIEKTFKLSSAVSTGNMVCFDLQGKIQKYSTPEAILDAFYDFRLT 1104

Query: 1036 FYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKN 1095
            FY+KRK+   + LEL   +L N+ RFIL ++N E+V+ NRKR +L+ ELR K + PFP+ 
Sbjct: 1105 FYQKRKEYLTKELELAHQRLSNQARFILAIINKELVIANRKRAELVAELRAKSYQPFPRG 1164

Query: 1096 SKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLN 1155
             +     VA   DE + + +  +    + + DY+YL  +A+ TLT EK   LLA RD+  
Sbjct: 1165 KR-----VAVDVDEDDAANDALD----LSAADYEYLFGLALSTLTAEKAAKLLAQRDEKE 1215

Query: 1156 EEVDDLRKATPESLWVKDLDALDM 1179
             E++ L   TP+ LW++DLDAL +
Sbjct: 1216 AELNILLAKTPKMLWIEDLDALQL 1239


>gi|213407866|ref|XP_002174704.1| DNA topoisomerase [Schizosaccharomyces japonicus yFS275]
 gi|212002751|gb|EEB08411.1| DNA topoisomerase [Schizosaccharomyces japonicus yFS275]
          Length = 1499

 Score = 1234 bits (3194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1202 (50%), Positives = 828/1202 (68%), Gaps = 57/1202 (4%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            + YQ+ S  EH+L RPDTYIGS+EK    +W+Y+ E   M+++ ++ VPGLYKIFDEI+V
Sbjct: 72   QQYQRISPREHVLRRPDTYIGSVEKTEMPMWVYDSEQNKMVYKEVNIVPGLYKIFDEIIV 131

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNK RDP M+ +KV ID E ++ISV+N+G G+PVEIH++EG+Y+PELIFGHLLTSSN
Sbjct: 132  NAADNKVRDPTMNTLKVEIDPEANVISVYNNGKGIPVEIHEKEGIYIPELIFGHLLTSSN 191

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDDN KK TGGRNGYGAKL NIFS EF +ETAD  R+KKYKQ +T NM KKSEP +   K
Sbjct: 192  YDDNQKKVTGGRNGYGAKLCNIFSHEFTVETADKLRMKKYKQTWTENMSKKSEPKVVDMK 251

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
              D +TK++FKPDLAKF MT L+DD+V+++K+RV D+AG +   +KV LN  R+ +K+F 
Sbjct: 252  RADEYTKITFKPDLAKFGMTKLDDDLVSVVKRRVYDMAGTI-PDIKVFLNNERINIKNFR 310

Query: 269  EYVDMYPKSV----------TRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
            +YV+++  S+          T  ++R NERWE+  TLS+GQF+ +SFVN IAT +GGTHV
Sbjct: 311  KYVELFVSSLRNRTDSTKPPTILYDRPNERWEVAYTLSDGQFKNISFVNSIATTRGGTHV 370

Query: 319  DYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            +YVA+++   V A  +KKNK+A +K   +KN+LW+F+N  I NP+FDSQTKETLT + S+
Sbjct: 371  NYVADEIVKRVQAEFSKKNKHAALKPFQIKNNLWLFINCQIVNPSFDSQTKETLTTKPSA 430

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLA 438
            FGSKC+LS+ F K++  KS I+      A  K  + + K DG     + G+ KL DAN A
Sbjct: 431  FGSKCDLSDTFFKQLI-KSEIIAVCSELAKAKADQQMSKTDGKSRSRITGLPKLSDANKA 489

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            G R S++CTLILTEGDSAK L ++GL VVGRD +GV+PLRGKLLNVREAS NQ++NN EI
Sbjct: 490  GTRESKKCTLILTEGDSAKTLVVSGLGVVGRDYYGVYPLRGKLLNVREASYNQIINNKEI 549

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
              IKKILGL    +Y +   LRYGHLMIMTDQ                            
Sbjct: 550  QAIKKILGLAHNKKYTSTDGLRYGHLMIMTDQ---------------------------- 581

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKE 618
            DHDGSHIKGL+IN++ S +PSLL +  FL+EFITPIV+   K  +++SF+++P+++ WKE
Sbjct: 582  DHDGSHIKGLIINYLESTYPSLLHLEGFLIEFITPIVRC-RKGREIISFFTLPEFDYWKE 640

Query: 619  SLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIE 678
            +   N   WSIKYYKGLGTS +K+ KEYF  +  H K F    D + + I++AFSKKK +
Sbjct: 641  N-NNNGRGWSIKYYKGLGTSDAKDMKEYFSALDRHIKQFHTIQDGENDLIDMAFSKKKAD 699

Query: 679  ARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 738
             RK+WL  + PG ++D  +  I+  +F+N+ELILFSMAD  RSIPS+VDGLKPGQRK+++
Sbjct: 700  VRKEWLRTYHPGLYIDHSQPVIEIKNFINQELILFSMADNIRSIPSVVDGLKPGQRKVIY 759

Query: 739  CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFG 798
              FK+N   EAKV Q +GY+SE +AYHHGE SL  TI+G+A +FVGSNNINLL P GQFG
Sbjct: 760  GMFKKNLKNEAKVEQLAGYISEQTAYHHGETSLQQTIIGLAHNFVGSNNINLLLPKGQFG 819

Query: 799  TRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVN 858
            +R +GGKDAA  RYIFT  S + R LF K DD +L+YLN++G  +EP +Y+PI+P +LVN
Sbjct: 820  SRIEGGKDAAQPRYIFTMPSRMARLLFDKRDDPILNYLNDEGLWVEPDYYVPIVPMLLVN 879

Query: 859  GSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTY 918
            G+EGIGTGWS++IPN+NP D+V N+R L+  E +EPMHPWYRGF GTI++         Y
Sbjct: 880  GAEGIGTGWSTFIPNFNPSDLVKNIRHLIKNEPLEPMHPWYRGFKGTIQQMTPDR----Y 935

Query: 919  TVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFE 976
             V+GIIE+V++ T+ I ELP+R WTQD +E+LES++  D+  SFI+ + +Y  +  V F 
Sbjct: 936  KVSGIIEQVSDDTVDITELPVRLWTQDMKEYLESLMAADKQGSFIKDYTEYHTEENVHFR 995

Query: 977  VFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEF 1036
            V L++E M     EGL  KFK+  T++TSNM  FD +G I+KYD+   IL+EF+ +RL +
Sbjct: 996  VKLTKEGMATALAEGLENKFKVARTLATSNMVAFDPQGRIRKYDSAYDILKEFYEVRLRY 1055

Query: 1037 YEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNS 1096
            Y++RK+  + +LE    K+ N+ RFI  ++ G +VV  +KR+ L+ ELR+KGF   PK  
Sbjct: 1056 YQRRKEHLVNDLETVYTKISNQARFIHMIIEGTLVVAKKKRSVLVQELREKGFKAIPKPK 1115

Query: 1097 KSIEAVVAG--ATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKL 1154
            K   A +A        +  ++  E     ++ D+ YLL+M + +LT E+   LL  + + 
Sbjct: 1116 KGRLAEIAAQETAANRDADDDAEEEDASPEADDFTYLLNMPVYSLTYERYMNLLKKKGEC 1175

Query: 1155 NEEVDDLRKATPESLWVKDLDALDMQLD-ELDKSDARAEEERMKIKGNGNGDAGPKIVAK 1213
             EE+D L K TP+ +W+ DL+  + + + ELD      E+ + + +   N    P I  K
Sbjct: 1176 EEELDKLMKITPKDIWLTDLEGFEKEWEKELD------EDAKTRFQSGPNSSNAPAIRKK 1229

Query: 1214 RA 1215
            R 
Sbjct: 1230 RT 1231


>gi|401881418|gb|EJT45718.1| DNA topoisomerase II [Trichosporon asahii var. asahii CBS 2479]
 gi|406701579|gb|EKD04695.1| DNA topoisomerase II [Trichosporon asahii var. asahii CBS 8904]
          Length = 1525

 Score = 1233 bits (3189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1181 (52%), Positives = 824/1181 (69%), Gaps = 86/1181 (7%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            +A  KT  EMYQK         RPDTYIGS+E HTQ +W+++ E+K M++RTI+YVPG +
Sbjct: 155  SAKKKTASEMYQK---------RPDTYIGSVEPHTQPMWVFDSENKAMVNRTITYVPGFF 205

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADNK  DP MD +KV ID+E++ ISV N+G G+PVE+H +EG+ +PELIF
Sbjct: 206  KIFDEILVNAADNKINDPTMDTIKVNIDRENNSISVWNNGKGIPVEMHSKEGIMIPELIF 265

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            G+L    NYDD+ KK TGGRNGYGAKL NI+S EF +ETAD   +KKYKQVF+ NMGKK+
Sbjct: 266  GNL----NYDDDQKKLTGGRNGYGAKLANIYSLEFTVETADKSNMKKYKQVFSQNMGKKT 321

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
             P I++ K+G+ WT+++FKPDLA+F+MT+++DD  AL+ KRV D+AG + K +KV LNG 
Sbjct: 322  TPKITENKKGEEWTQITFKPDLARFSMTNIDDDTYALLMKRVYDVAGTV-KDIKVNLNGE 380

Query: 261  RVPVKSFAEYVDMYPKSVTRFH--------------ERVNERWEICVTLSEGQFQQVSFV 306
            R+ VK+F +YVDMY  + +  H              E   +RWE+   LS+G+F QVSF 
Sbjct: 381  RLKVKNFKQYVDMYVAANSAAHTAEGAAVTKPTVVYENAGKRWEVAFALSDGEFNQVSFA 440

Query: 307  NGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDS 366
            N IAT KGGTHVD +A Q+AN + A + KKNK A VK   +K+H+W+FVNALI+NP+FDS
Sbjct: 441  NSIATTKGGTHVDMIATQLANKLQAFIVKKNKTAKVKPFQIKSHMWIFVNALIENPSFDS 500

Query: 367  QTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV 426
            QTKETLTL+ S+FGSKCELSEEF+KKV AKSGIVE +L++A FKQ + +KK DG K   +
Sbjct: 501  QTKETLTLKSSAFGSKCELSEEFIKKV-AKSGIVENVLAFAKFKQDQAMKKTDGAKRSRI 559

Query: 427  RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV-GRDRFGVFPLRGKLLNVR 485
             GI+KL+DAN AGGRN+ QCTLILTEGDSAK++A++G+  + GRDRFG+FPLRGKLLNVR
Sbjct: 560  GGIAKLDDANWAGGRNASQCTLILTEGDSAKSMAVSGVGAIQGRDRFGIFPLRGKLLNVR 619

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
            EA+ +Q++ N EI NIK+ILGLK    Y +  SLRYGHLMIMTDQ               
Sbjct: 620  EANHDQIMKNQEIQNIKQILGLKHNHNYTSTDSLRYGHLMIMTDQ--------------- 664

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL 605
                         DHDGSHIKGL+INF+  F+PSLLKIP+FL EFITPIVK T K  +  
Sbjct: 665  -------------DHDGSHIKGLIINFLDHFYPSLLKIPNFLNEFITPIVKVT-KGKQER 710

Query: 606  SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG 665
             F++MP+YE WKE+   N   W  KY K            YF +I  H+  F   +D+D 
Sbjct: 711  MFFTMPEYEEWKEA-NNNGHGWFAKYLK------------YFNDIQRHRLRFGTLEDEDK 757

Query: 666  EAIELAFSKKKIEARKKWLLQFEPGNHLDQKE-KYIKYSDFVNKELILFSMADLQRSIPS 724
              I+LAF+KKK + RK+WL QF+PG  L   +   I  SDFVNKELILFSMAD  RSIPS
Sbjct: 758  TLIDLAFNKKKADDRKEWLRQFKPGTFLQTDDIDEIPISDFVNKELILFSMADNIRSIPS 817

Query: 725  MVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVG 784
            + DGLKPGQRK++F  FK+    + KV Q  GY+ E++AYHHGE SL STI+G+AQ+F+G
Sbjct: 818  VADGLKPGQRKVIFGCFKKKIKNQIKVQQIVGYILENTAYHHGETSLYSTIVGLAQNFIG 877

Query: 785  SNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIE 844
            SNN+NLL P+GQFGTR QGGKDAASARYI T +S ITR +F   D+ +L+ L E+G  IE
Sbjct: 878  SNNVNLLAPHGQFGTRLQGGKDAASARYIHTSVSRITRTIFHPADEPILNNLFEEGLHIE 937

Query: 845  PTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGG 904
            P +YMP++P VL+NG++GIGTGWS+ IPNYNP+D+V N+RR++ GE  EPM PW+RGF G
Sbjct: 938  PEYYMPVVPLVLINGADGIGTGWSTSIPNYNPKDVVENIRRMMRGEEPEPMVPWFRGFKG 997

Query: 905  TIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND-----S 959
            TIE+    +    + V+G+ E++++ T+ I ELP+R+WTQD++E +E +   +D     S
Sbjct: 998  TIERLDKDK----FKVSGVAEKIDDKTIEITELPVRKWTQDFKEMIEQMTSGSDTPKVVS 1053

Query: 960  FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKY 1019
             I+ + +   DTTV F + + EE M + + +G  K FKL+TT+STSNM  FD +G I+KY
Sbjct: 1054 VIKDYEENHTDTTVHFRLHMKEEGMKKAEADGFDKFFKLSTTLSTSNMVCFDLEGKIRKY 1113

Query: 1020 DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTD 1079
             +PE+IL +F+  RLE+Y  RK+   ++L  +  +L N+ RF+  ++  E+ V+N+K+  
Sbjct: 1114 SSPEEILGDFYPKRLEYYALRKQYLADDLNKQFDRLSNQARFVQMIIKKELSVSNKKKAV 1173

Query: 1080 LLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            ++ ELR   F PFPK     + V AG +  T E EE  E  +     DYDYLL MAI  L
Sbjct: 1174 IVQELRDHDFRPFPKGGP--KPVTAGESAPTLEEEE--EEEDQGSDADYDYLLGMAIWNL 1229

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQ 1180
            T EKV+ LL  RD   +E+ +L K TP+ +W KDLD  + +
Sbjct: 1230 TEEKVKKLLEQRDAKEQELIELLKLTPQDIWSKDLDEFEAE 1270


>gi|325187394|emb|CCA21933.1| predicted protein putative [Albugo laibachii Nc14]
 gi|325190307|emb|CCA24783.1| topoisomerase putative [Albugo laibachii Nc14]
          Length = 1499

 Score = 1230 bits (3183), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 692/1506 (45%), Positives = 943/1506 (62%), Gaps = 137/1506 (9%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            +TIE++YQKK+QL+HILLRPDTY+GSI+  TQ +WIY+EE+  M  + I++VPGLYKIFD
Sbjct: 70   QTIEQIYQKKTQLQHILLRPDTYVGSIDPVTQNMWIYDEEASKMHLKKITFVPGLYKIFD 129

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EI+VNA DNKQRD  M+ ++V ID     ISV N+G G+PV  H+E  VYVPELIFGHLL
Sbjct: 130  EIIVNACDNKQRDASMNTLRVTIDPTAGEISVWNNGKGIPVVQHKEHEVYVPELIFGHLL 189

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            T SN+DD  KKTTGGRNGYGAKL NIFST+FI+ETAD    K+YKQVF++NM +K  P I
Sbjct: 190  TGSNFDDKKKKTTGGRNGYGAKLANIFSTKFIVETADKNVKKRYKQVFSDNMSQKESPAI 249

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +   + D +T ++F+PDL +F M  L+DD+V+L KKRV D+AG   KS++V LN  ++  
Sbjct: 250  TSWNKQD-FTCITFRPDLKRFKMDRLDDDIVSLFKKRVFDIAGVTDKSLQVYLNEEKITC 308

Query: 265  KSFAEYVDMYPKSVTR---FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
            KSF +Y+ +Y     +     ++  ERW++    S+  FQQ+SFVNGI T +GG HV Y+
Sbjct: 309  KSFPDYISLYTGESAKEDVIFDKPTERWQVGFGPSDDGFQQISFVNGICTTRGGQHVTYI 368

Query: 322  ANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS 381
            A+QV N ++A V K+NK   VK + +KN + ++V+ALIDNPAFDSQTKETLT R SSFGS
Sbjct: 369  ADQVVNKLVAAVKKRNKGEAVKPNYIKNMMTIYVSALIDNPAFDSQTKETLTTRPSSFGS 428

Query: 382  KCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN--DGTKTEDVRGISKLEDANLAG 439
               LS++FLK++  KSGIVE ++S+A FKQ+ +L++    G     + GI+KL+DAN AG
Sbjct: 429  THSLSDKFLKQI-EKSGIVERVVSFAKFKQTAELQRKGAKGGNRSKLTGITKLDDANYAG 487

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
                 +CTLILTEGDSAK+L + GLSVVGRD +GVFPL+GKLLNVREAS +Q+L N EI 
Sbjct: 488  TAEGRKCTLILTEGDSAKSLTIGGLSVVGRDYYGVFPLKGKLLNVREASHSQILKNEEIQ 547

Query: 500  NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
            N+ KILGLK G  Y + KSLRYGHLMIM DQ                            D
Sbjct: 548  NVVKILGLKYGQVYESTKSLRYGHLMIMADQ----------------------------D 579

Query: 560  HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKES 619
            HDGSHIKGL+INFIH FWPSLL++  F+ EFITPIVK   K  K   FY+MP+YEAW+ +
Sbjct: 580  HDGSHIKGLVINFIHHFWPSLLQVEGFMHEFITPIVKCA-KGSKKEVFYTMPEYEAWRLA 638

Query: 620  LGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEA 679
               N   W IKYYKGLGTST++E KEYF ++  H+ DF ++ ++DG++I++AFSKK++E 
Sbjct: 639  TN-NGQGWRIKYYKGLGTSTTEEAKEYFSDLATHQIDFSYKGEEDGDSIDMAFSKKRVEE 697

Query: 680  RKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFC 739
            RK WL  + PG H+D     + YS+FVNKELILFS AD  RSIP +VDG KP QRK+L+C
Sbjct: 698  RKNWLRGYTPGTHVDYNIADMPYSEFVNKELILFSRADNMRSIPCLVDGFKPSQRKVLYC 757

Query: 740  SFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGT 799
             FKRN   E KVAQ +GYVSEHS+YHHGE SL  TI+ MAQDF+GSNN NLL PNGQFGT
Sbjct: 758  CFKRNLRVEIKVAQLAGYVSEHSSYHHGEASLHGTIINMAQDFIGSNNSNLLSPNGQFGT 817

Query: 800  RNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNG 859
            R  GGKDAAS RYIFT+L  I    F  +D+ LL+YL+EDGQ IEP WY+P+IP VLVNG
Sbjct: 818  RILGGKDAASPRYIFTKLEAIAYKFFDPNDNSLLNYLDEDGQLIEPEWYVPVIPMVLVNG 877

Query: 860  SEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM-MEPMHPWYRGFGGTIEKTASKEAGVT- 917
            SEGIGTGWSS+IPNYNP D++ N+R  + GE   +P+ PWYRGF G+IE+ +    G + 
Sbjct: 878  SEGIGTGWSSFIPNYNPLDLIENLRARIKGEAPTKPLVPWYRGFTGSIEERSGTRDGDSQ 937

Query: 918  -YTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFE 976
             + V GI    +++TL I ELP++ WT  Y++FLES++ +ND+ I+ F++   D+ V F 
Sbjct: 938  AFVVRGIFHVEDDSTLVITELPVKTWTHTYKQFLESLM-ENDT-IKDFKENHTDSKVLFT 995

Query: 977  VFLSEESMMRT--KQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRL 1034
            + ++ E M        G+++KFKL ++IS +NMHLFD+ G I+KYD+P +I+  F+ IRL
Sbjct: 996  ISMTPEKMQEIVLSPGGIMRKFKLESSISAANMHLFDADGRIQKYDSPHEIISAFYDIRL 1055

Query: 1035 EFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTP-FP 1093
             +Y KRK   L+ L  ++  L NKV+FIL V+ G+++V+NRK+ +LL EL + G+   +P
Sbjct: 1056 AYYGKRKAAMLQKLTDQIEMLANKVKFILAVIQGDLIVSNRKKVELLHELVEMGYDKLYP 1115

Query: 1094 KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDK 1153
             NSK   +      D+ E  EE  ++  G     Y+YLLSM I +LT E+V  L A+  +
Sbjct: 1116 NNSKGKNSDEDEEKDDQEGDEEEGDLTKG-----YNYLLSMKIWSLTKERVDKLRAELKE 1170

Query: 1154 LNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAK 1213
               E   L   + E LW+ DLD L+  L E +++  R   + +    NG           
Sbjct: 1171 REVEYKSLEAKSIEELWLTDLDTLEELLHETEETRQRINAQSIATVQNG----------- 1219

Query: 1214 RAPKNARKNDKKSNNARATEAMGEMDNVTKVVK----PKGRAG------LKKAPAEKLDD 1263
             + K  RK   +    +  ++  + D V +VVK    PK   G      LK+     + +
Sbjct: 1220 -SKKRQRKQIPRKKAIKEDDSEYKEDKVKRVVKRMALPKESKGKNASTSLKQTKITAMKN 1278

Query: 1264 DEEDEVPDLKQRLAK--LNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKK 1321
             +  E   L +R+A+   N+  A + ++   D++         +P KK+  ++    Q  
Sbjct: 1279 SDPLESVSLAERIARRARNQTAAESSVKSENDEA---------IPLKKESMARPVLNQ-- 1327

Query: 1322 VVTVETSDSEDEIIIDDDEAFEIAAPEEGKKG-GRKAAGNSKAAKP-------------- 1366
              T E+S  + EI    DEA  +   +  ++   + AAG+S  ++               
Sbjct: 1328 --TAESS-VQSEI----DEAVPLKEEKTARRARNQTAAGSSVQSEAVPLKDEQMESDEDD 1380

Query: 1367 -----AAETKKRGPAKKQQPEASLGQRLLTEMLKPAESSPEKKVRKMRASPFNKKSGSML 1421
                 AA TK++ PAK++    ++ Q    +     ES P+ K    R     K+   ++
Sbjct: 1381 VFILEAAPTKRKAPAKRKS--NAISQLKKEKQENDVESKPKTKRSLRRVDKPVKRQKQIV 1438

Query: 1422 GRAGTIEEPSGSSPSTSEEVAEVLPPKARPQRANRRQARY--VLSD-SESE-------KA 1471
            G             S  E   ++     R    NR   RY  +LSD SE+E       K 
Sbjct: 1439 G-------------SEEESQDDMKTETVRRGTRNRNPIRYQSMLSDLSETEASETQERKG 1485

Query: 1472 TDDSEF 1477
            TDDS F
Sbjct: 1486 TDDSNF 1491


>gi|443895754|dbj|GAC73099.1| hypothetical protein PANT_8d00062 [Pseudozyma antarctica T-34]
          Length = 2299

 Score = 1230 bits (3182), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 652/1281 (50%), Positives = 847/1281 (66%), Gaps = 90/1281 (7%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            +A +K+  E YQK SQLEHIL RPDTYIGS+EKHT+ LW+Y++  + M +R  +YVPG Y
Sbjct: 1049 SANSKSASETYQKLSQLEHILKRPDTYIGSVEKHTEKLWVYDKTKQQMAYRETTYVPGFY 1108

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADNK RDP M  +KV I++E + I V N+G G+PVE+H +E VY+PELIF
Sbjct: 1109 KIFDEILVNAADNKARDPNMTHLKVDINREENSIMVWNNGHGIPVEMHDKERVYIPELIF 1168

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            GHLLTSSNYDDN  K TGGRNGYGAKL NI+STEF +ETAD K   KYKQ F+ NM  K 
Sbjct: 1169 GHLLTSSNYDDNEAKVTGGRNGYGAKLANIYSTEFTVETADSKNQCKYKQTFSRNMHDKG 1228

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
            +P I+  K  D +T ++FKPDLA F M  ++D + ALM KRV D+AG + K +KV LNG 
Sbjct: 1229 KPKITPHKRQDEYTSITFKPDLALFGMDSIDDHMEALMLKRVYDMAGTV-KGIKVTLNGE 1287

Query: 261  RVPVKSFAEYVDMYPKSVTRFHERVNE----------------------------RWEIC 292
             + +KSF +YV+MY  ++       ++                             WE+ 
Sbjct: 1288 LLKIKSFKQYVEMYVTAINELGGSADQGENGAADMPVGATAKPAIIYESTVDKGRNWEVA 1347

Query: 293  VTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLW 352
              +S+G+F+QVSFVN IATIKGG HVD+VA+QV   ++  V K  K   V  + V+  LW
Sbjct: 1348 FAVSDGEFRQVSFVNNIATIKGGKHVDHVADQVITRLIEHVKKDKKTGKVLPNQVRQQLW 1407

Query: 353  VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS 412
            VFVN  I NP FD QTKETLTL+QS+FGSK  L++EF +KV  KSG+V+ ++S+A +KQ 
Sbjct: 1408 VFVNCQIVNPTFDGQTKETLTLKQSAFGSKWTLTDEFARKVI-KSGVVDNIVSFARYKQD 1466

Query: 413  KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF 472
            + LKK DG K   +  I KLEDAN AGGR +  CTLILTEGDSAKALA++GL  VGRD +
Sbjct: 1467 QALKKTDGHKRTRITNIPKLEDANNAGGRKARDCTLILTEGDSAKALAVSGLVEVGRDNY 1526

Query: 473  GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVL 532
            GVFPLRGKLLNVREAS +Q++ NSEI  IK+ILGL+ G +Y +V SLRYG +MIMTDQ  
Sbjct: 1527 GVFPLRGKLLNVREASHDQIMKNSEIKAIKEILGLQHGKQYLDVNSLRYGSIMIMTDQ-- 1584

Query: 533  LAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 592
                                      DHDGSHIKGL+INF+  F+PSLLKIP FLVEFIT
Sbjct: 1585 --------------------------DHDGSHIKGLIINFLDHFYPSLLKIPGFLVEFIT 1618

Query: 593  PIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITL 652
            PIVK T K  + LSF+++P+Y  WKE    N   W IKY+KGLGTS S++ K+YF+ +  
Sbjct: 1619 PIVKCT-KGKQELSFFTIPEYMTWKEQ-HNNGKGWRIKYFKGLGTSDSQDAKKYFRAMDK 1676

Query: 653  HKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELIL 712
            H   F    D D E I+LAF+KKK + RK+WL QF PG +LD     I Y+DF+NKELIL
Sbjct: 1677 HMLPFDVTKDGDRELIDLAFNKKKADDRKEWLRQFRPGTYLDHNIDTIPYADFINKELIL 1736

Query: 713  FSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLA 772
            FSMAD  RSIPS VDGLKPGQRK++F +F R    E KVAQ  G++   +AYHHG+ SL 
Sbjct: 1737 FSMADNLRSIPSAVDGLKPGQRKVIFGTFNRRGDGEIKVAQLVGHIIGTTAYHHGDASLT 1796

Query: 773  STILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKL 832
             TI+G+AQ+FVGSNN+NLL+P GQFGTR  GGKDAASARYIFT L  ITR LFP+ DD L
Sbjct: 1797 MTIVGLAQNFVGSNNVNLLEPRGQFGTRLLGGKDAASARYIFTALPKITRALFPQADDAL 1856

Query: 833  LDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMM 892
            L++L++DGQ IEP WYMP++P VL+NG+EGIGTGWS+ +PNYNP +IVAN+RR + GE +
Sbjct: 1857 LNFLDDDGQSIEPEWYMPVVPQVLMNGAEGIGTGWSTSVPNYNPHEIVANIRRRMAGEEV 1916

Query: 893  EPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLES 952
             PM PWYRGF G I++ A       + V+G + ++++ T  I ELPIR WT  Y+E LE 
Sbjct: 1917 VPMKPWYRGFTGDIDEVAPGR----FKVSGRVTQIDDKTYEITELPIRTWTSTYKEGLEE 1972

Query: 953  II---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHL 1009
             I   ++  + I+ +++Y  ++TV F V L+ +       +G+   FK++  IST+NM L
Sbjct: 1973 RIVSTEKVPATIKDYKEYHTESTVHFIVELTAKGQAEIADKGVEAFFKMSAQISTTNMVL 2032

Query: 1010 FDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGE 1069
            FD  G IKKY TPE+ILE+F+ +RL +Y+KRK+  ++ L+L   +L N+ RF+  ++N +
Sbjct: 2033 FDQDGKIKKYSTPEEILEDFYLLRLSYYQKRKEHLVDQLKLMYDRLSNQARFVQMIINRQ 2092

Query: 1070 IVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYD 1129
            +VV+NRKR D++ +LR+  F PFPK  K   A VA   ++ E  +E+    +     DYD
Sbjct: 2093 LVVSNRKRADIVADLRENDFRPFPKQGK---AAVAAEIEDAEPVDESDISADS----DYD 2145

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            YLL+MAI  LT EKV  LL +R+   EE+  L   TP++LW +DL       DE+     
Sbjct: 2146 YLLNMAIYNLTKEKVDKLLNERNAKEEELRVLIGRTPQNLWDEDLTNFLGFWDEM----- 2200

Query: 1190 RAEEERMKIKGNGNGDAGPKIVAKRAPKN--ARKNDKKSNNARATE----AMGEMDNVTK 1243
             AE+ER ++K         K V K APK   AR+  KK  N+   E    AM  +D+   
Sbjct: 2201 LAEDER-RLKDVSFKVQKGKQVKKVAPKGGAARRVLKKPLNSDGEEEDDVAMDGLDDSED 2259

Query: 1244 VVKP----KGRAGLKKAPAEK 1260
              KP    K     K +PA K
Sbjct: 2260 DFKPAAPKKKTTAAKASPARK 2280


>gi|395326395|gb|EJF58805.1| type II DNA topoisomerase [Dichomitus squalens LYAD-421 SS1]
          Length = 1540

 Score = 1228 bits (3178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1180 (51%), Positives = 817/1180 (69%), Gaps = 55/1180 (4%)

Query: 19   GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPG 78
            G     K+  EMY K SQLEHIL RPD+YIGS+E  T  +W ++ ++K M++R + YVPG
Sbjct: 89   GTNGKKKSASEMYTKLSQLEHILKRPDSYIGSVETITTTMWTWDSDNKRMVYREVKYVPG 148

Query: 79   LYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
             +KI DEILVNAADNK  DP MD +KV ID E++ ISV+N+G G+P+E+H +E +Y+PEL
Sbjct: 149  FFKIVDEILVNAADNKINDPSMDTIKVTIDIENNTISVYNNGRGIPIEMHSKEKIYIPEL 208

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            IFGHLL+SSNYDD+ KK TGGRNGYGAKL NI+STEF +ETAD    +KY Q +T NM K
Sbjct: 209  IFGHLLSSSNYDDDEKKLTGGRNGYGAKLANIYSTEFTVETADKNTSQKYVQTWTENMSK 268

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
              +  I+K   G+ +T+V+FKPDL +F M  +++D V+L+KKRV DLAG + K VKV LN
Sbjct: 269  MGKAKITKNGRGEEYTRVTFKPDLKRFGMESIDEDTVSLLKKRVHDLAGTV-KDVKVFLN 327

Query: 259  GHRVPVKSFAEYVDMY-----------------PKSVTRFHERVNERWEICVTLSEGQFQ 301
              R+ +K+F +YV+++                 PK    +      RWE+   +S+G  Q
Sbjct: 328  DERLKIKNFKQYVELFLNSAAEAAANKTDGAAQPKPTVVYEAPAGGRWEVAFAVSDGTPQ 387

Query: 302  QVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDN 361
            QVSF N I+T KGGTHV+Y+A+Q+A H++  + KKNK A VK   +K+H+W+FVNAL++N
Sbjct: 388  QVSFANSISTFKGGTHVNYIADQIAKHLITSIAKKNKAATVKPAQIKSHMWIFVNALVEN 447

Query: 362  PAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT 421
            P FDSQTKETLTL  S FGSK  LSE+F+KKV AKS IV+ +L+WA FK  + LKK DG 
Sbjct: 448  PTFDSQTKETLTLPASKFGSKPTLSEDFMKKV-AKSSIVDHVLNWAKFKADQQLKKTDGN 506

Query: 422  KTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKL 481
            +   + G++KL DAN AG + + +CTLILTEGDSAKALA+AGL VVGRD +GVFPLRGKL
Sbjct: 507  RRSRITGMTKLCDANNAGTKKAGECTLILTEGDSAKALAIAGLGVVGRDSYGVFPLRGKL 566

Query: 482  LNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLW 541
            LNVR+A  +Q++ N EI NIKKILGL+    Y +   LRYG LM+MTDQ           
Sbjct: 567  LNVRDAKHDQIMKNEEIQNIKKILGLQHNKTYTDTAGLRYGRLMLMTDQ----------- 615

Query: 542  FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
                             DHDGSHIKGLLIN++  F+PSLLK+P FLVEFITP+V+   K 
Sbjct: 616  -----------------DHDGSHIKGLLINYLDHFYPSLLKLPKFLVEFITPVVRVW-KG 657

Query: 602  GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWED 661
             +V++FY++P+YE W E    ++  W  KYYKGLGTS  ++ ++YF+++  H   F    
Sbjct: 658  KQVINFYTIPEYEMWLEQTP-DSHKWQHKYYKGLGTSKDEDARDYFRDMKRHMIPFSTSK 716

Query: 662  DQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
            + D E IELAFSKKK + RK+WL QF+PG +LD  ++ I  S+F+N+ELILFSMAD  RS
Sbjct: 717  EGDRELIELAFSKKKADDRKEWLRQFKPGTYLDHTQREIPLSEFINRELILFSMADNIRS 776

Query: 722  IPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQD 781
            IPS+ DGLKPGQRK+++  FKRN  KE KVAQ  GYVSE SAYHHGE SL +TI+ +AQD
Sbjct: 777  IPSVADGLKPGQRKVIWSCFKRNLKKEIKVAQLVGYVSEVSAYHHGEASLMATIINLAQD 836

Query: 782  FVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQ 841
            FVGSNNINLL PNGQFGTR+QGGKD A+ARYIFT L+PI R L    DD +L Y  +DG+
Sbjct: 837  FVGSNNINLLMPNGQFGTRDQGGKDHAAARYIFTELAPIVRTLMHPADDAILTYQQDDGR 896

Query: 842  QIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRG 901
            Q+EP WYMPI+P VLVNG+EGIGTGWS+ IP YNP DIVAN+RRL+N E  EPM PW+RG
Sbjct: 897  QVEPEWYMPIVPMVLVNGAEGIGTGWSTTIPAYNPEDIVANIRRLMNNEEQEPMLPWWRG 956

Query: 902  FGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII-DQNDSF 960
            F GT++K    +    Y V G   ++++TT+ I ELPI RWTQ+++  LE++I ++ D  
Sbjct: 957  FSGTVKKVGDNK----YDVIGTCTKLDDTTVEITELPIHRWTQNFKAELEAMIGEKGDGS 1012

Query: 961  IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYD 1020
            ++ + ++ ++  V F V +S + M   +++G  + FKL+T I+TSNM  FD  G IKKY+
Sbjct: 1013 VKDYEEHHNNMNVHFIVTMSAKGMEEAEKQGFHEYFKLSTKINTSNMVCFDFDGKIKKYN 1072

Query: 1021 TPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDL 1080
             PE+I+E+F+  RL +Y+KRK   +  LE++L KL N+ RF+  +++ E+ V+NR++ D+
Sbjct: 1073 APEEIIEDFYPKRLAYYQKRKDYLVNELEVQLDKLNNQARFVKMIIDRELSVSNRRKADI 1132

Query: 1081 LLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLT 1140
            + +LR K F PFPK +K+  A       E E+ +       G  S D+DYLL MAI +LT
Sbjct: 1133 VQDLRNKQFRPFPKVAKAKAAGETEDVVEEEDEDGEAGGPAGNLS-DFDYLLGMAIWSLT 1191

Query: 1141 LEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQ 1180
             EK++ L    ++  +E+ +L   TP  +W  DLDA  +Q
Sbjct: 1192 KEKIEKLRQQANEKEQELLELLARTPNQIWQTDLDAFLVQ 1231


>gi|303388894|ref|XP_003072680.1| DNA topoisomerase II [Encephalitozoon intestinalis ATCC 50506]
 gi|303301822|gb|ADM11320.1| DNA topoisomerase II [Encephalitozoon intestinalis ATCC 50506]
          Length = 1141

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1155 (53%), Positives = 809/1155 (70%), Gaps = 87/1155 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE YQKK+ +EHILLRPD+YIGS+EK  Q +++++E++  M+ + I YVPGLYKIFD
Sbjct: 2    KTIEETYQKKTPVEHILLRPDSYIGSVEKEMQQMYVWDEDNSKMVFKNIEYVPGLYKIFD 61

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EI+VNAADNK RDPKM+ +KV ID E + ISV+N+G G+PV IH+EE VYVPELIFG+LL
Sbjct: 62   EIIVNAADNKIRDPKMNVIKVSIDPEKNEISVYNNGRGIPVRIHKEENVYVPELIFGNLL 121

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNY+D+ KK TGGRNGYGAKL NIFS EFI+ETAD +  K YKQ + +NMG K EP I
Sbjct: 122  TSSNYNDDEKKVTGGRNGYGAKLCNIFSKEFIVETADCEVKKYYKQRYRDNMGIKEEPEI 181

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            S+  + D +T+++FKPDL +F M  L+DD V+L+KKRV DL G + K VK+ LN  ++PV
Sbjct: 182  SRYTKED-FTRITFKPDLRRFKMNKLDDDTVSLLKKRVYDLGGIV-KDVKIFLNEKKIPV 239

Query: 265  KSFAEYVDMY-PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
            K F EYV +Y P  V   H+ +N+RWE+ +T SE QFQQVSFVN I T KGG+HV++V  
Sbjct: 240  KGFKEYVKLYIPSGVNIVHQVINDRWELALTTSEEQFQQVSFVNAICTSKGGSHVNHVVE 299

Query: 324  QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
            ++ + ++  + KK K  +V+   +K+ +++FVN LI+NPAFDSQTKE LTLR S+FGSKC
Sbjct: 300  RIVDPLLEAIQKKEKGLSVRPFQIKSCMFIFVNCLIENPAFDSQTKENLTLRVSAFGSKC 359

Query: 384  ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            E   +F+K V   + +V+ + S+A  +QS+ LKK DG KT  + GI KLEDAN AG   S
Sbjct: 360  EPISDFVKNVIKNTSLVQKVTSFAKARQSQQLKKTDGAKTSRLSGIPKLEDANFAGTSKS 419

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSAK LA++GLSVVGRD +GVFPLRGKLLNVREAS  Q+++N+EI NIKK
Sbjct: 420  KDCTLILTEGDSAKTLAVSGLSVVGRDIYGVFPLRGKLLNVREASHKQIMDNAEISNIKK 479

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+    Y +V SLRYGH+MIMTDQ                            DHDGS
Sbjct: 480  ILGLQHNKIYEDVSSLRYGHIMIMTDQ----------------------------DHDGS 511

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
            HIKGL+INF+  F+PSLLKIP FL EFITPIV+A+ K G+V  F+++P+YE +K+    N
Sbjct: 512  HIKGLIINFLDHFYPSLLKIPGFLQEFITPIVRASKK-GEVKDFFTLPEYEEFKK----N 566

Query: 624  ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
            +  W+IKYYKGLGTSTS + K+YF N+ +H K F    ++D E I+LAF+KKK +ARK W
Sbjct: 567  SDGWNIKYYKGLGTSTSADAKQYFSNLPIHVKYFTPLIEEDKELIDLAFNKKKADARKTW 626

Query: 684  LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
            LL FEPG  LDQ +  I  SDFVNKELILFSMAD  RSIPS+VDGLKPGQRK++F  FKR
Sbjct: 627  LLNFEPGTFLDQSQPQISISDFVNKELILFSMADNIRSIPSLVDGLKPGQRKVMFSCFKR 686

Query: 744  NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
            N   E KVAQ  GYVSE SAYHHGEQSL STI+ +AQDFVGSNNINLL P GQFG+R QG
Sbjct: 687  NLRSEIKVAQLVGYVSEQSAYHHGEQSLCSTIVNLAQDFVGSNNINLLLPIGQFGSRLQG 746

Query: 804  GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
            GKDAAS RYIFT LSP+TR +F ++DD +L YLN+D   IEP +Y+PIIP VLVNG+EGI
Sbjct: 747  GKDAASPRYIFTSLSPLTRLIFNENDDAILSYLNDDNLSIEPEFYVPIIPMVLVNGAEGI 806

Query: 864  GTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGI 923
            GTGWS+ IPN+NP D+V N+RRL+ GE    M P+YR F GTIEK    +    Y V+GI
Sbjct: 807  GTGWSTSIPNFNPVDVVENIRRLIRGEDPVEMIPYYRNFRGTIEKVGEGK----YQVSGI 862

Query: 924  IEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEES 983
             E   +  L I ELP+  WT +Y+EFLES++      ++ F++Y  + TV F V LS+  
Sbjct: 863  YE--GDMDLEISELPVGTWTLNYKEFLESLVQA--GVVKDFKEYHTEKTVSFSVKLSKS- 917

Query: 984  MMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKV 1043
                     +   KL+TTI+ +NM  FD    IKKY TP++IL+EF+ +RL +Y  RK+ 
Sbjct: 918  ---------ISNLKLSTTITINNMVCFDENLGIKKYSTPQEILKEFYDVRLRYYSIRKEN 968

Query: 1044 QLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVV 1103
             L+ ++ EL+KLENKVRFI  V  GE+V++ R++ +++ +L  + +              
Sbjct: 969  MLKVMKEELVKLENKVRFIKEVSTGELVISRRRKGEVIFDLESRRYA------------- 1015

Query: 1104 AGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
                                +  DY+YLLSM+I +LT+E+++ L  +  K  EE + L  
Sbjct: 1016 --------------------RVDDYEYLLSMSILSLTVERIEKLNNEHAKKLEEYNKLES 1055

Query: 1164 ATPESLWVKDLDALD 1178
             TP+ LW+ DL+  +
Sbjct: 1056 KTPKELWLDDLEVFE 1070


>gi|336364306|gb|EGN92666.1| hypothetical protein SERLA73DRAFT_172653 [Serpula lacrymans var.
            lacrymans S7.3]
          Length = 1484

 Score = 1227 bits (3174), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1268 (49%), Positives = 844/1268 (66%), Gaps = 82/1268 (6%)

Query: 18   VGPTAPN---------KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTM 68
             GP+ P          KT  E Y K SQLEHIL RPD+YIGS+E  TQALW Y+ ++K M
Sbjct: 78   AGPSQPKPTVAKNGKKKTASETYTKLSQLEHILKRPDSYIGSVETITQALWTYDADTKRM 137

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIH 128
            +HR + YVPG +KI DEILVNAADNK  D  MD +KV ID ++  ISV N+G G+P+E+H
Sbjct: 138  VHRELKYVPGFFKIVDEILVNAADNKINDKTMDTLKVTIDVDNSTISVFNNGRGIPIEMH 197

Query: 129  QEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKY 188
              E +Y+PELIFGHLL+SSNYDD+ KK TGGRNGYGAKL NI+S EF I+TAD    +KY
Sbjct: 198  STEKMYIPELIFGHLLSSSNYDDDEKKLTGGRNGYGAKLANIYSHEFTIDTADKNSSQKY 257

Query: 189  KQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGC 248
            KQ +TNNM    +  I+K  + + +T+V+F+PDL +F M  +++D V+L+KKRV D+AG 
Sbjct: 258  KQTWTNNMSNVGKAKITKNSKNEEYTRVTFRPDLKRFGMDSIDEDTVSLLKKRVYDMAGT 317

Query: 249  LGKSVKVELNGHRVPVKSFAEYVDMYPKSV----------------TRFHERVNERWEIC 292
            + + VKV LN  R+ +K+F +YV++Y  SV                T  HE+V  RWE+ 
Sbjct: 318  I-RDVKVFLNDERLKIKNFKQYVELYLNSVAAEAAEASGGAAQAKPTVIHEQVGPRWEVA 376

Query: 293  VTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLW 352
              +S+G FQQVSF N IAT KGGTHV  +++Q+A +++A + KKNK A VK   +KNH+W
Sbjct: 377  FAVSDGSFQQVSFANSIATTKGGTHVTLISDQLAKNLIAAITKKNKAATVKPAQIKNHMW 436

Query: 353  VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS 412
            +FVNALI+NP FDSQTKETLTL    FG+K  LSEEF+KKV  KS I++ +L+WA FK  
Sbjct: 437  IFVNALIENPTFDSQTKETLTLPAGKFGTKPVLSEEFMKKVQ-KSTIIDNILNWAKFKAD 495

Query: 413  KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF 472
            + +KK DG+K   + G+ KL DAN AG RN+E+CTLILTEGDSAKALA+AGL VVGRD F
Sbjct: 496  QQIKKTDGSKRNRLTGLPKLADANNAGTRNAEKCTLILTEGDSAKALAVAGLGVVGRDNF 555

Query: 473  GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVL 532
            GVFPLRGKLLNVREA  +Q++ N EI NIKKI+GL+    Y+ + SLRYG LMIMTDQ  
Sbjct: 556  GVFPLRGKLLNVREAKHDQIMKNEEIQNIKKIMGLQHNKVYSGIGSLRYGRLMIMTDQ-- 613

Query: 533  LAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 592
                                      DHDGSHIKGLLINF+  F+PSLLKIP+FLVEF+T
Sbjct: 614  --------------------------DHDGSHIKGLLINFLDHFFPSLLKIPNFLVEFVT 647

Query: 593  PIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITL 652
            PIV+ + K  + + F+++P+YE W E    +A  W  KY+KGLGTS+  + + YF N+  
Sbjct: 648  PIVRVS-KGKQRIDFFTIPEYEQWVEDTP-DAHKWDAKYFKGLGTSSDSDARLYFSNMAK 705

Query: 653  HKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELIL 712
            H   F    D D E IELAFSKKK + RK+WL QF+ G +LD     I YSDF+N+ELIL
Sbjct: 706  HMIPFAATQDGDKELIELAFSKKKADERKEWLRQFKAGTYLDHNIDEISYSDFINRELIL 765

Query: 713  FSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLA 772
            FSMAD  RSIP++ DGLKPGQRK+++  FKR   KE KVAQ  GY+SE +AYHHGE SL 
Sbjct: 766  FSMADNIRSIPALADGLKPGQRKVIWGCFKRKLKKEIKVAQLVGYISEVAAYHHGEASLT 825

Query: 773  STILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKL 832
             TI+ +AQD+VGSNN+NLL PNGQ+GTR+QGGKD ASARYIFT LSP+ R ++   DD L
Sbjct: 826  MTIVNLAQDYVGSNNVNLLLPNGQYGTRDQGGKDHASARYIFTELSPLARTIYNPADDPL 885

Query: 833  LDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMM 892
            L YL ED   IEP +Y+P+IP VL+NG+EGIGTGWS+ IP YNP DIV N+RR++ GE +
Sbjct: 886  LTYLKEDNDWIEPEYYLPVIPLVLINGAEGIGTGWSTSIPCYNPEDIVNNIRRMMAGEEL 945

Query: 893  EPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLES 952
             PM PW+RGF GTI+K    +    Y V G+  ++N+TT+ I ELPI +WTQ+Y+  LE+
Sbjct: 946  VPMLPWWRGFKGTIKKVGDYK----YDVIGVARKINDTTVEITELPIHKWTQNYKAELEA 1001

Query: 953  II-DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFD 1011
            +I ++ +  I+ ++++ D+  + F + +S + + + +++GL + FKLT+ I+TSNM  F+
Sbjct: 1002 MIGEKGEGIIKDYKEHHDNVNIHFVITMSPKDLEKAEEQGLTEFFKLTSKINTSNMICFN 1061

Query: 1012 SKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIV 1071
              G I+KY TPE+I+EEFF  RL  Y+ RK      L+ +  +L N+ RF+  +V+ E++
Sbjct: 1062 LDGKIQKYQTPEEIIEEFFPKRLACYQSRKDYLANELQTQFERLSNQARFVKMIVDKELI 1121

Query: 1072 VNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYL 1131
            V NRK+ D++ ELR+  F PFPK  K+  A  A   +E E+   N        S DYDYL
Sbjct: 1122 VANRKKADIISELRKLKFRPFPKVVKAKAAGEAEDAEEEEDETSN-------TSTDYDYL 1174

Query: 1132 LSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARA 1191
            L MAI +LT EK++ LL    +   E+  L + TP  +W +D   LDM + E  K+  + 
Sbjct: 1175 LGMAIWSLTSEKIEKLLQQAQEKEAELLILLERTPVKMWNED---LDMFMAEWQKNCEQW 1231

Query: 1192 EEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRA 1251
            E + + +  NG      ++  K+A    RK+       +A  +    D+    VKPK   
Sbjct: 1232 ENKSL-LDANGK-----RVKRKQATLETRKSLSGPGKKKAHAS----DDSDYDVKPKKAP 1281

Query: 1252 GLKKAPAE 1259
               + PAE
Sbjct: 1282 AKPRKPAE 1289


>gi|396081182|gb|AFN82800.1| DNA topoisomerase II [Encephalitozoon romaleae SJ-2008]
          Length = 1144

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1157 (53%), Positives = 803/1157 (69%), Gaps = 87/1157 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE YQKK+ +EHILLRPD+YIGS+EK  Q ++I++EES+ M+ R I YVPGLYKIFD
Sbjct: 2    KTIEETYQKKTPVEHILLRPDSYIGSVEKEAQQMYIWDEESERMVCRNIEYVPGLYKIFD 61

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EI+VNAADNK RDPKMD +KV ID E + ISV+N+G G+PV IH+EE VYVPELIFG+LL
Sbjct: 62   EIIVNAADNKIRDPKMDVIKVSIDPEKNEISVYNNGKGIPVRIHKEENVYVPELIFGNLL 121

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNY+D  KK TGGRNGYGAKL NIFS EFI+ETAD +  K YKQ + NNMG K EP I
Sbjct: 122  TSSNYNDEEKKVTGGRNGYGAKLCNIFSKEFIVETADCEVKKYYKQKYRNNMGAKEEPEI 181

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            S+  +GD +T+++FKPDL +F M  L+DD+VAL+KKRV DL G + K VK+ LN  R+ +
Sbjct: 182  SRYTKGD-FTRITFKPDLRRFKMDRLDDDIVALLKKRVYDLGGIV-KDVKIFLNEKRISI 239

Query: 265  KSFAEYVDMY-PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
            K F EYV +Y P      H+ +N+RWE+ +T SE QFQQVSFVN I T KGG+HV++V  
Sbjct: 240  KGFREYVKLYIPPGTNVVHQIINDRWEVALTTSEEQFQQVSFVNAICTTKGGSHVNHVVE 299

Query: 324  QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
            ++   +   + KK K  +VK   +K+ +++FVN LI+NPAFDSQTKE LTLR S+FGSKC
Sbjct: 300  RIVEPLSEAIQKKEKGLSVKPFQIKSCMFIFVNCLIENPAFDSQTKENLTLRVSAFGSKC 359

Query: 384  ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            E   +F+K V   + IV+ + S+A  +QS  LKK DG KT  + GI KLEDAN AG   S
Sbjct: 360  EPIADFVKSVIKNTSIVQKVASFAKARQSLQLKKTDGAKTSRLSGIPKLEDANFAGTNKS 419

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSAK LA++GLSVVGRD +GVFPLRGKLLNVREAS  Q++ NSEI +IKK
Sbjct: 420  KDCTLILTEGDSAKTLAVSGLSVVGRDTYGVFPLRGKLLNVREASHKQIMENSEISSIKK 479

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+    Y +  SLRYGH+MIMTDQ                            DHDGS
Sbjct: 480  ILGLQHNKVYEDTSSLRYGHVMIMTDQ----------------------------DHDGS 511

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
            HIKGL+INF+  F+PSLLKIP FL EFITPI++AT K G+V  F+++P+YE +K S  G 
Sbjct: 512  HIKGLIINFLDHFYPSLLKIPGFLQEFITPIIRATKK-GQVRDFFTLPEYEEFKRSEEG- 569

Query: 624  ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
               W+IKYYKGLGTSTS + K+YF N+ +H K F    D+D E I+LAF+KKK +ARK W
Sbjct: 570  ---WNIKYYKGLGTSTSADAKQYFSNLPIHVKHFTPLVDEDKELIDLAFNKKKADARKTW 626

Query: 684  LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
            LL FEPG  LDQ   +I  SDFVNKELILFSMAD  RSIPS+VDGLKPGQRK++F  FKR
Sbjct: 627  LLSFEPGTFLDQSLSHISISDFVNKELILFSMADNIRSIPSLVDGLKPGQRKVMFSCFKR 686

Query: 744  NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
            N   E KVAQ  GYVSE SAYHHGEQSL STI+ +AQDFVGSNNINLL P GQFG+R QG
Sbjct: 687  NLRSEIKVAQLVGYVSEQSAYHHGEQSLCSTIVNLAQDFVGSNNINLLLPIGQFGSRLQG 746

Query: 804  GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
            GKDAAS RYIFT LSP+TR +F ++DD +L+YLN+D   IEP +Y+PIIP VLVNG+EGI
Sbjct: 747  GKDAASPRYIFTSLSPLTRLIFNENDDAILNYLNDDNLSIEPEFYVPIIPMVLVNGAEGI 806

Query: 864  GTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGI 923
            GTGWS+ IPN+NP D+V N+RR++ GE    M P+YR F G+IEK    +    + V+G+
Sbjct: 807  GTGWSTSIPNFNPIDVVENIRRMIRGEDPVEMVPYYRNFRGSIEKIGEGK----FQVSGV 862

Query: 924  IEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEES 983
             +   +  L I ELP+  WT +Y+EFLES++      ++ F++Y  + TV+F V L++  
Sbjct: 863  YK--GDMDLEITELPVGTWTLNYKEFLESLVQA--GVVKDFKEYHTEKTVNFTVKLAKH- 917

Query: 984  MMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKV 1043
                     +   KL+ TI+ +NM  FD    IKKY TP+ IL +F+ +RL +Y  RK  
Sbjct: 918  ---------VSNLKLSNTITINNMVCFDENLGIKKYSTPKDILRDFYDVRLRYYSMRKDN 968

Query: 1044 QLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVV 1103
             ++ ++ EL+KLENKV+FI  V  G +++N R++ +++ +L  +G+              
Sbjct: 969  MMKVMKDELVKLENKVKFIKEVSTGGLIINRRRKAEIIFDLESRGYA------------- 1015

Query: 1104 AGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
                                +  DY+YLL M+I +LT+E+++ L  +  K  EE + L  
Sbjct: 1016 --------------------RVDDYEYLLGMSILSLTVERIEKLNNEHAKRLEEYNKLAG 1055

Query: 1164 ATPESLWVKDLDALDMQ 1180
             TP+ LW++DLDA + +
Sbjct: 1056 KTPKVLWLEDLDAFERE 1072


>gi|403419656|emb|CCM06356.1| predicted protein [Fibroporia radiculosa]
          Length = 1571

 Score = 1225 bits (3169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1174 (51%), Positives = 818/1174 (69%), Gaps = 64/1174 (5%)

Query: 26   TIEEMYQKK-SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            T  E Y K  SQLEHIL RPD+YIGS+E  TQ +W ++ + K M+++ I YVPG +KI D
Sbjct: 94   TASETYTKVLSQLEHILKRPDSYIGSVETITQPMWAWDSDRKLMVYKEIKYVPGFFKIVD 153

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK  DP MD +KV ID  +++ISV+NSG G+P+E+H +E +Y+PELIFGHLL
Sbjct: 154  EILVNAADNKINDPSMDTIKVTIDPRNNVISVYNSGRGIPIEMHSKEKIYIPELIFGHLL 213

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            +SSNYDD+ KK TGGRNGYGAKL NI+S EF I+TAD    +KY Q +T+NM K  +  I
Sbjct: 214  SSSNYDDDEKKLTGGRNGYGAKLANIYSVEFTIDTADKNTGQKYVQTWTDNMSKMGKAKI 273

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +K   G+ +T+V+FKPDL +F M  +++D VAL+KKRV D+AG + K VKV LN  R+ +
Sbjct: 274  TKNSRGEEYTRVTFKPDLKRFGMDSIDEDTVALLKKRVHDIAGTV-KDVKVFLNDERLKI 332

Query: 265  KSFAEYVDMYPKSV----------------TRFHERVNERWEICVTLSEGQFQQVSFVNG 308
            K+F +YV++Y  S                 T  +E++  RWE+   +SEG FQQVSF N 
Sbjct: 333  KNFKQYVELYLNSAAEQAADASGGAAQAKQTMIYEQIGTRWEVAFAVSEGAFQQVSFANS 392

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQT 368
            I+T+KGGTHV Y+A+Q+A +++  ++KKNK A VK   +KNH+W+FVNALI+NP FDSQT
Sbjct: 393  ISTVKGGTHVQYIADQLAKNLVTFISKKNKAATVKPPQIKNHMWIFVNALIENPTFDSQT 452

Query: 369  KETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRG 428
            KETLTL  + FG+K  LSEEF+KKV  KS IV+ +L+WA FK  + LKK DG++   + G
Sbjct: 453  KETLTLPSAKFGTKPSLSEEFMKKVQ-KSVIVDHILNWAKFKADQQLKKTDGSRRNRLSG 511

Query: 429  ISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREAS 488
            + KL DAN AG R + +CTLILTEGDSAK LA+AGLSVVGRD +GVFPLRGKLLNVR+A 
Sbjct: 512  LPKLSDANNAGTRKASECTLILTEGDSAKTLAVAGLSVVGRDNYGVFPLRGKLLNVRDAK 571

Query: 489  SNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAW 548
             +Q++ N EI NIKKILGL+   +Y +V  LRYG LMIMTDQ                  
Sbjct: 572  HDQIMKNEEIQNIKKILGLQHNKDYKDVSGLRYGQLMIMTDQ------------------ 613

Query: 549  ITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFY 608
                      DHDGSHIKGLLIN+   F+PSLLK+P FLVEF+TPI++AT K  +++ FY
Sbjct: 614  ----------DHDGSHIKGLLINYFEHFYPSLLKVPHFLVEFVTPIIRAT-KGTQLIEFY 662

Query: 609  SMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAI 668
            ++P+YE W E    N++SW  KY KGLGTS  ++ + YF+ +  H+  F    + D ++I
Sbjct: 663  TIPEYEQWLEETP-NSASWRAKYLKGLGTSKDEDARRYFKLMRKHRIAFSTIKEGDRDSI 721

Query: 669  ELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
            ELAFSKK+ + RK+WL QF+PG  LD  +  I ++DF+N+ELILFSMAD  RSIPS+ DG
Sbjct: 722  ELAFSKKRADDRKEWLRQFKPGTFLDHTQGEIGFTDFINRELILFSMADNIRSIPSVADG 781

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKP QRK+++  FKR    E KVAQ  G+VSEH+ YHHGEQSL  TI+ +AQDFVG NN+
Sbjct: 782  LKPVQRKVIWACFKRKLKGEIKVAQLVGHVSEHAQYHHGEQSLMMTIVNLAQDFVGGNNL 841

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            NL+ PNGQFGTR+QGGKD ASARYI+T LSP TR +F   DD L+ YL +DG  IEP +Y
Sbjct: 842  NLMMPNGQFGTRDQGGKDHASARYIYTELSPATRAVFHPGDDPLMKYLTDDGHLIEPEYY 901

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            MP +P VL+NG+EGIGTGWS+ IP YNP DIVAN+RRL+ GE   PM PW+RGF GTI+K
Sbjct: 902  MPTVPMVLINGAEGIGTGWSTNIPCYNPEDIVANLRRLMAGEEQLPMLPWWRGFKGTIKK 961

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII-DQNDSFIRGFRQY 967
            T+       Y V+GI+ ++++TT  I ELPI +WTQ+Y+  LE++  ++ D  ++ +++Y
Sbjct: 962  TSD----YRYDVSGIVTKLDDTTFEITELPIHKWTQNYKVELEAMCGEKGDGPVKDYKEY 1017

Query: 968  SDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILE 1027
             ++  V F V +  +++ + + +GLL+ F+LT  I+TSNM  FD +G IKKY+TPE+I+E
Sbjct: 1018 HNNMNVHFVVHMEPKAVEKAESQGLLEFFRLTGKINTSNMICFDFEGKIKKYNTPEEIIE 1077

Query: 1028 EFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK 1087
            +F+  RL +Y+KRK      L  EL KL N++RFI  +++ E+ V+NRK+ D++ +LR+K
Sbjct: 1078 DFYPQRLAYYQKRKDFMANELSDELDKLNNQIRFIQMIIDRELAVSNRKKVDIVADLRKK 1137

Query: 1088 GFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS------IDYDYLLSMAIGTLTL 1141
             F PFPK SK+     A A++ TE  E N +  +   S       D+DYLL MAI +LT 
Sbjct: 1138 EFRPFPKVSKA----KAKASETTELVEVNEDEEDEEDSGPAGSASDFDYLLGMAIWSLTK 1193

Query: 1142 EKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            EK++ L     +   E+  L + TP  +W  DLD
Sbjct: 1194 EKMEKLRQQAKQTEGELLILLERTPIQIWQCDLD 1227


>gi|449550442|gb|EMD41406.1| hypothetical protein CERSUDRAFT_109994 [Ceriporiopsis subvermispora
            B]
          Length = 1522

 Score = 1223 bits (3165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1184 (51%), Positives = 825/1184 (69%), Gaps = 61/1184 (5%)

Query: 14   NANVVGPTAPN---KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIH 70
            +A  V  TA N   K+  E Y K SQLEHIL RPD+YIGS+E  TQ +W+++ E K M H
Sbjct: 79   SAPTVAATATNGKKKSASETYTKLSQLEHILKRPDSYIGSVETITQPMWVWDSELKRMAH 138

Query: 71   RTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQE 130
            + ISYVPG +KI DEILVNAADNK  DP MD +KV ID E +LISV+NSG G+P+E+H +
Sbjct: 139  KEISYVPGFFKIVDEILVNAADNKINDPTMDTIKVTIDAEKNLISVYNSGRGIPIEMHSK 198

Query: 131  EGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQ 190
            E +Y+PELIFGHLL+SSNYDD+ KK TGGRNG+GAKL NI+STEF +ETAD    +KY Q
Sbjct: 199  EKMYIPELIFGHLLSSSNYDDDEKKLTGGRNGFGAKLANIYSTEFTVETADKNSSQKYSQ 258

Query: 191  VFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLG 250
             +T+NM K  +  I+K    + +T+V+FKPDL +F M  ++DD VAL+KKRV DLAG + 
Sbjct: 259  TWTDNMSKMGKAKITKNARNEEYTRVTFKPDLKRFGMDSIDDDTVALLKKRVHDLAGTV- 317

Query: 251  KSVKVELNGHRVPVKSFAEYVDMYPKSV----------------TRFHERVNERWEICVT 294
            K +KV LN  R+ +K+F +YV++Y  S                 T  +E++ +RWE+   
Sbjct: 318  KDIKVFLNDERLKIKNFKQYVELYLSSAAEQATDISGGAAQPKPTMIYEQIGKRWEVAFA 377

Query: 295  LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVF 354
            +SEG FQQVSF N I+T+KGGTHV  + +Q+A +++A ++KKNK A VKA  +KNH+W+F
Sbjct: 378  VSEGTFQQVSFANSISTVKGGTHVTLITDQIAKNLIAAISKKNKAAAVKAGQIKNHMWIF 437

Query: 355  VNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKD 414
            VNALI+NP FDSQTKETLTL  S FG+K  LSE+F+KKV  KS I+E +L+WA FK  + 
Sbjct: 438  VNALIENPTFDSQTKETLTLPTSKFGTKPVLSEDFMKKVQ-KSAIIEHILNWAKFKADQQ 496

Query: 415  LKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGV 474
            +KK DG++   + G+ KL DAN AG + + +CTLILTEGDSAK+LA+AGL VVGRD FGV
Sbjct: 497  MKKTDGSRRTRLTGLPKLSDANNAGSKKASECTLILTEGDSAKSLAVAGLGVVGRDNFGV 556

Query: 475  FPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLA 534
            FPLRGKLLNVR+A  +Q++ N EI NIKKILGL+   +Y +   LRYG LMIM DQ    
Sbjct: 557  FPLRGKLLNVRDAKHDQIMKNEEIQNIKKILGLQHNKDYKDAGQLRYGKLMIMADQ---- 612

Query: 535  PLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPI 594
                                    DHDGSHIKGLL+N++  F+PSLLKIP F +EFITPI
Sbjct: 613  ------------------------DHDGSHIKGLLLNYLDHFYPSLLKIPGFFLEFITPI 648

Query: 595  VKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHK 654
            V+ +  + KV  F+++P+Y+ W E+   N+ +W +KYYKGLGTS   + +EYF+N+  H 
Sbjct: 649  VRVSKGDKKV-DFFTVPEYQQWVENTP-NSHTWKVKYYKGLGTSVDSDAREYFKNMRKHM 706

Query: 655  KDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFS 714
              F   ++ D E IE+AFSKKK + RK+WL QF PG  L+  ++ IK+SDF+N+ELILFS
Sbjct: 707  IPFAPTEEGDHELIEMAFSKKKADERKEWLRQFRPGTFLNHDQRQIKFSDFINRELILFS 766

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
            MAD  RSIPS+ DGLKPGQRK+L+  FKR    E KVAQ  GYVSEH+ YHHGE SL  T
Sbjct: 767  MADNIRSIPSVADGLKPGQRKVLWSCFKRGLKSEIKVAQLVGYVSEHAQYHHGEMSLMQT 826

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +AQDFVGSNN+N+L PNGQFGTR+QGGKD ASARYIFT  SPITR +F   DD L++
Sbjct: 827  IVNLAQDFVGSNNMNILMPNGQFGTRDQGGKDHASARYIFTEPSPITRKVFHPADDPLMN 886

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            +  ED   +EP +Y+P++P +L+NG+EGIGTGWS+ +P+YNP DIVAN+RRL+ GE   P
Sbjct: 887  FQTEDNHVVEPDYYLPVLPMILINGAEGIGTGWSTSVPSYNPEDIVANIRRLMAGEEQVP 946

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII 954
            M PW+RGF GTI+K    +    Y V G++ ++++TT+ I ELPI +WTQ+Y+  LE++ 
Sbjct: 947  MLPWWRGFKGTIKKVGEHK----YDVLGVVNKLDDTTVEITELPIHKWTQNYKAELEAMC 1002

Query: 955  -DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
             ++ D  I+ ++++ D+  V F + ++   + + +Q+GL + FKLT  I+TSNM  FD  
Sbjct: 1003 GEKGDGVIKDYKEHHDNMNVHFVINMTANDLEKAEQQGLQEFFKLTGKINTSNMICFDFD 1062

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G I+KY++PE+I+EE++  RL +Y+KRK      L+L+L +L N+ RF+  +V+ E+VV+
Sbjct: 1063 GQIRKYNSPEEIVEEYYPKRLAYYQKRKDYLANELQLQLDRLSNQARFVKMIVDRELVVS 1122

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLS 1133
            NRK+ D++ ELR+  F PFPK +K   A  AG T++  E E+  +      + DYDYLL 
Sbjct: 1123 NRKKIDIVAELRKLEFRPFPKVAK---AKAAGETEDALEDED--DTSPNAATTDYDYLLG 1177

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            MAI +LT EK+  L+        E+  L + TP  +W KDLD  
Sbjct: 1178 MAIYSLTKEKIDKLVQQAKDKETELLALLELTPIQIWQKDLDVF 1221


>gi|405117738|gb|AFR92513.1| DNA topoisomerase II [Cryptococcus neoformans var. grubii H99]
          Length = 1247

 Score = 1223 bits (3165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 655/1256 (52%), Positives = 832/1256 (66%), Gaps = 138/1256 (10%)

Query: 19   GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPG 78
             PT+ NK   E+    SQ EH+L RPDTYIGS+E  TQ +W+   E+KTM+HR I++VPG
Sbjct: 104  APTS-NKNASEL----SQREHVLKRPDTYIGSVEAITQPMWVLNPETKTMVHRPITFVPG 158

Query: 79   LYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
              KIFDEILVNA+DNK  DP MD++KVVID+E + ISV+N+G G+PVE+H +EGV +PEL
Sbjct: 159  FLKIFDEILVNASDNKINDPTMDSIKVVIDREKNTISVYNNGRGIPVEMHTKEGVMIPEL 218

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            IFGHLL  SN+DD+ KK TGGRNGYGAKL NI+S EFI+ETAD    KKYKQ+F+NNM K
Sbjct: 219  IFGHLLAGSNFDDDQKKLTGGRNGYGAKLANIYSHEFIVETADKVNSKKYKQIFSNNMSK 278

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
            K  P I + K+G+ WTK++FKPDL +F M  ++DD  AL+ KRV D+AG + K VKV LN
Sbjct: 279  KGTPKILENKKGEEWTKITFKPDLERFGMNGIDDDTNALLMKRVYDMAGTV-KDVKVFLN 337

Query: 259  GHRVPVKSFAEYVDMY-------------PKSVTR---FHERVNERWEICVTLSEGQFQQ 302
              R+ VK+F +YV+MY               +VT+    +E  N+RWE+   LS+G+F+Q
Sbjct: 338  DERIKVKNFKQYVEMYLNASTTAASEAAGGAAVTKPPIIYEVANKRWEVAFALSDGEFKQ 397

Query: 303  VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNP 362
            VSF N IAT KGGTHVD +A Q+AN +M  + KKNK A VK   +KNH+W+FVNALI+NP
Sbjct: 398  VSFTNSIATTKGGTHVDMIATQIANKLMDQIKKKNKAAPVKPFQIKNHMWIFVNALIENP 457

Query: 363  AFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
            AFDSQTKE LTL+ S+FGSKCELSEEF+KKV AK+GI++ +L+WA FKQ + LKK DGTK
Sbjct: 458  AFDSQTKENLTLKSSAFGSKCELSEEFIKKV-AKTGIIDNVLNWARFKQDQILKKTDGTK 516

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
               + GI KLEDAN AGGRNS+ CTLILTEGDSAKALA++GL+VVGRD +GVFPLRGKLL
Sbjct: 517  RSRISGIVKLEDANNAGGRNSKNCTLILTEGDSAKALAVSGLAVVGRDEYGVFPLRGKLL 576

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            NVREA  +Q++ N EI +IK+ILGLK   +Y  V SLRYGHLMIMTDQ            
Sbjct: 577  NVREAGHDQIIKNVEIQHIKQILGLKHNQDYATVDSLRYGHLMIMTDQ------------ 624

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG 602
                            DHDGSHIKGL+INF+  F+PSLL+IP+FLVEFITPIVK   K  
Sbjct: 625  ----------------DHDGSHIKGLIINFLDHFYPSLLRIPNFLVEFITPIVKVW-KGK 667

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            K +SFY+MP YE WK S   N   W  KYYKGLGTSTS + K+YF ++  H+  F     
Sbjct: 668  KEISFYTMPQYEEWK-SQNNNGRGWESKYYKGLGTSTSADAKKYFSDLDKHRLAFETMQP 726

Query: 663  QDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
            +D + I++AF+KKK + RK+WL QF+PG +LD   + +  SDFVNKELILFSMAD  RSI
Sbjct: 727  EDRQLIDMAFNKKKADDRKEWLRQFKPGTYLDHDVQSLPISDFVNKELILFSMADNIRSI 786

Query: 723  PSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDF 782
            PS+ DGLKPGQRK+LF  FKRN  KE KVAQ +GYVSE +AYHHGE SL STI+G+AQ+F
Sbjct: 787  PSVADGLKPGQRKVLFGCFKRNLTKEIKVAQLAGYVSEKTAYHHGEASLTSTIVGLAQNF 846

Query: 783  VGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQ 842
            VGSNNINLL PNGQFGTR  GGKDAASARYIFT L  +TR +F   DD LL+YL EDG +
Sbjct: 847  VGSNNINLLDPNGQFGTRLAGGKDAASARYIFTNLPRMTRAIFHPADDGLLNYLVEDGMR 906

Query: 843  IEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGF 902
            IEP ++MP +P VL+NG++GIGT                                     
Sbjct: 907  IEPDYFMPTVPMVLINGADGIGT------------------------------------V 930

Query: 903  GGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSF-- 960
             G IEK                  +N+TTL I ELPIRRWTQD++E LE +    D    
Sbjct: 931  SGVIEK------------------INDTTLEITELPIRRWTQDFKEMLEEMTTGTDKVPQ 972

Query: 961  -IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKY 1019
             I+ + ++  DTTV F V ++E+++   ++EG  K+F+LTTT+ T NM  FD  G IKKY
Sbjct: 973  TIKDYEEHHTDTTVHFRVHMTEKNLADAEKEGFDKRFRLTTTLGTGNMVCFDLNGKIKKY 1032

Query: 1020 DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTD 1079
             +PE+ILEEFFH RLE+Y  RK+   + L  +  +L N+ RF+  ++  E+VV+ ++R D
Sbjct: 1033 ASPEEILEEFFHKRLEYYGHRKQHLADELNRQFERLSNQARFVHMIITKELVVSGKRRPD 1092

Query: 1080 LLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            ++ ELR   F PFPK  K+ E    GA +E EE +E        Q+ DYDYLL MAI +L
Sbjct: 1093 IVTELRNLKFRPFPKKEKAKEEGENGAAEEEEEWDEG-------QASDYDYLLGMAIWSL 1145

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDELDKSDARAEEER 1195
            T EKV+ LLA+RD   +E+ +L K +P  +W +DLD       + LD  D +DA+     
Sbjct: 1146 TSEKVEKLLAERDAKEQELIELLKLSPNDIWDRDLDNFLAEWQLALDA-DTADAK----- 1199

Query: 1196 MKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRA 1251
                       G K   K A K  +K  K++      +   +      V+KPKGR 
Sbjct: 1200 -----------GSKPKTKAAIKATQKRKKRAAGDDTDDDSDDFKPPATVLKPKGRG 1244


>gi|121308839|dbj|BAF43524.1| DNA topoisomerase II [Coprinopsis cinerea]
          Length = 1569

 Score = 1221 bits (3160), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1278 (49%), Positives = 848/1278 (66%), Gaps = 103/1278 (8%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K+  EMYQK +QLEHIL RPD+YIGSIE  T  +W Y+ E+K M+HR + YVPG +KI D
Sbjct: 97   KSTSEMYQKLTQLEHILKRPDSYIGSIETITTPMWTYDSETKRMVHREVKYVPGFFKIVD 156

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK  DP MD +KV ID E   ISV+N+G G+P+EIH +E +Y+PE+IFGHLL
Sbjct: 157  EILVNAADNKINDPSMDTLKVTIDVEEGTISVYNNGRGIPIEIHSKEKMYIPEMIFGHLL 216

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TS+NYDD+ KK TGGRNGYGAKL NI+S EF +ETAD    +KYKQ +T+NM K  +  I
Sbjct: 217  TSTNYDDDEKKLTGGRNGYGAKLANIYSLEFTVETADKNTSQKYKQTWTDNMSKCGKAKI 276

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +K   G+ +T+++F+PDL +F M  +++D V+L+K+RV D+AG + K VKV LN  R+ +
Sbjct: 277  TKNTRGEEYTRITFRPDLKRFGMNSIDEDTVSLLKRRVFDMAGTV-KDVKVFLNDERLKI 335

Query: 265  KSFAEYVDMYPKSV----------------TRFHERVNERWEICVTLS-EGQFQQVSFVN 307
            K+F +YV+MY  SV                T  HE++++RWEI  TLS EG FQ VSF N
Sbjct: 336  KNFKQYVEMYVSSVQEAAAEKSGGAAQPKQTVIHEQISDRWEIAYTLSTEGTFQHVSFAN 395

Query: 308  GIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
             IAT KGGTHV+Y+A+Q++  ++  ++KKNK A VK   ++NH+W+FV +LI NP FDSQ
Sbjct: 396  SIATSKGGTHVNYIADQISKALVTSISKKNKGATVKPAQIRNHMWLFVKSLIVNPTFDSQ 455

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
            TKE LTL  S FGSK  +S+EF+KKV AKSGIV+ +L+WA FK  + +K+ DGTK   + 
Sbjct: 456  TKELLTLPSSKFGSKPTISDEFIKKV-AKSGIVDNVLNWAKFKADQQMKRADGTKRSRLL 514

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
            G++KL DAN AG R+++ CTLILTEGDSAKALA+AGL VVGRD FGVFPLRGKLLNVREA
Sbjct: 515  GLAKLSDANNAGTRHAQDCTLILTEGDSAKALAIAGLGVVGRDNFGVFPLRGKLLNVREA 574

Query: 488  SSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
              +Q++ N EI NIKKI+GL+   +Y N  SLRYG LMIMTDQ                 
Sbjct: 575  RHDQIMKNEEIQNIKKIMGLQHNKDYTNTSSLRYGRLMIMTDQ----------------- 617

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSF 607
                       DHDGSHIKGL+INF+  F+PSLLKIP FLVEF+TPIV+   K  KV  F
Sbjct: 618  -----------DHDGSHIKGLIINFLDHFYPSLLKIPDFLVEFVTPIVRV-KKGNKVKDF 665

Query: 608  YSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA 667
            +++P+YE W E    +A  W  KYYKGLGTS  K+ +EYF  +  H   F    + D E 
Sbjct: 666  FTIPEYEQWLEE-APDARKWESKYYKGLGTSEDKDAREYFSKMEKHMIPFAPTQEGDREL 724

Query: 668  IELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVD 727
            I+LAFSKKK + RK+WL QF+PG  LD + + I YS+F+NKELILFSMAD  RSIPS+ D
Sbjct: 725  IDLAFSKKKADERKEWLRQFKPGTFLDHRLEEIPYSEFINKELILFSMADNVRSIPSIAD 784

Query: 728  GLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNN 787
            GLKPGQRK+++  FKR   KE KVAQ  GY+SEH+AYHHGE SLA+TI+ +AQD+VGSNN
Sbjct: 785  GLKPGQRKVIWGCFKRKLKKEIKVAQLVGYISEHAAYHHGEASLAATIINLAQDYVGSNN 844

Query: 788  INLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
            + LL PNGQ+GTR  GGKD A+ RYIFT    ITR ++   DD LL+YL +D   IEP W
Sbjct: 845  LALLSPNGQYGTREIGGKDHAAPRYIFTNAKSITRAIYHPFDDPLLNYLKDDDVPIEPEW 904

Query: 848  YMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIE 907
            YMP +P VL+NG+EGIGTGWS+ IP YNP DIVAN+RR++  E  EPM PW+RGF G + 
Sbjct: 905  YMPTVPMVLINGAEGIGTGWSTNIPPYNPVDIVANLRRMMKEEEPEPMTPWWRGFKGEVR 964

Query: 908  KTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID------------ 955
             T   +    Y V G+  ++N+TT+ I ELPI +WT+ +++ LE++I             
Sbjct: 965  PTGKGK----YDVVGVATKINDTTVEISELPIHKWTRTFKDELEAMITGEKKDKDKDKDK 1020

Query: 956  ---------QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN 1006
                     +N   ++ F+++ D+  V FEV ++ + + + +++GL++ F LTT +ST+N
Sbjct: 1021 DEDGKKDVVKNAGMVKDFKEHHDNLNVLFEVTMNPKDLEKAEEKGLVEFFGLTTKVSTTN 1080

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            M LFD +G IKKY+TPE+IL++F+ +RL +Y+KRK  Q   L     KL N++RFI  ++
Sbjct: 1081 MILFDFEGKIKKYETPEEILKDFYPMRLAYYQKRKDYQALELSTAYDKLNNQIRFIEMII 1140

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI 1126
              E+VV+NRK+ D++ ELR+  F PFPK +K+     A   +E EESE+  E        
Sbjct: 1141 KKELVVSNRKKADIVAELRKLNFRPFPKVAKT---KTAKPDEEEEESEDEEEESGSEAVT 1197

Query: 1127 DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
            D+DYLL MAI +LT E+++ L     +  +E+  L + +P  LW  DLD     L+E +K
Sbjct: 1198 DFDYLLGMAIYSLTRERIEKLKQQAHEKEQELLALLEKSPTDLWNTDLDKF---LEEWEK 1254

Query: 1187 SDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEM-----DNV 1241
             D    E++   KG G               N +K  +++   R +  MG       D+ 
Sbjct: 1255 -DCMIFEQK---KGEGGA------------VNGKKRKQRTLKTRKSIGMGRRGKDSDDDD 1298

Query: 1242 TKVVKPKGRAGLKKAPAE 1259
               +KP   A  K+ PAE
Sbjct: 1299 FVPIKP--NAAAKRKPAE 1314


>gi|71018835|ref|XP_759648.1| hypothetical protein UM03501.1 [Ustilago maydis 521]
 gi|46099406|gb|EAK84639.1| hypothetical protein UM03501.1 [Ustilago maydis 521]
          Length = 1518

 Score = 1221 bits (3160), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1245 (50%), Positives = 834/1245 (66%), Gaps = 78/1245 (6%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            +A +K+  E YQK SQLEHIL RPDTYIGS+EKHT+ LW++++  K M++R  +YVPGLY
Sbjct: 90   SANSKSASETYQKLSQLEHILKRPDTYIGSVEKHTEKLWVFDKSKKQMVYRETTYVPGLY 149

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADNK RD  M A+KV I++E   I V N+G G+PVE+H++E VY+PELIF
Sbjct: 150  KIFDEILVNAADNKARDSNMTALKVEINREEGSIMVWNNGHGIPVEMHEKERVYIPELIF 209

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            GHLLTSSNYDDN  K TGGRNGYGAKL NI+STEF +ETAD K   KYKQ FT NM +K 
Sbjct: 210  GHLLTSSNYDDNEAKVTGGRNGYGAKLANIYSTEFTVETADSKNQCKYKQTFTKNMHEKG 269

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
            +P I+K  + D +T ++FKPDLA F M  ++D + ALM KRV D+AG + K +KV LNG 
Sbjct: 270  KPKITKHSKNDEYTSITFKPDLALFGMDAIDDHMEALMLKRVYDMAGTV-KGIKVTLNGE 328

Query: 261  RVPVKSFAEYVDMY--------------------------PKSVTRFHERVNE--RWEIC 292
             + +K+F +YV+MY                          PK    +   V++   WE+ 
Sbjct: 329  LLKIKNFKQYVEMYVSAINELGGKADNGEEDAAGLPTSAAPKPAIIYESTVDKGRNWEVA 388

Query: 293  VTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLW 352
              +S+G+F+QVSFVN IATIKGG HVD+VA+QV + ++  V K      V  + V+  LW
Sbjct: 389  FAVSDGEFRQVSFVNNIATIKGGKHVDHVADQVISRLIEHVKKDKHTGKVMPNQVRQQLW 448

Query: 353  VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS 412
            VFVN  I NP FD QTKETLTL+QS+FGSK  L++EF +KV  KSG+V+ ++S+A FKQ 
Sbjct: 449  VFVNCQIVNPTFDGQTKETLTLKQSAFGSKWTLTDEFARKVI-KSGVVDNIVSFARFKQD 507

Query: 413  KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF 472
            + LKK DG K   +  I KLEDAN AGGR ++ CTLILTEGDSAK+LA+AG+  VGRD +
Sbjct: 508  QALKKTDGHKRTRITNIPKLEDANNAGGRKAKDCTLILTEGDSAKSLAVAGIVEVGRDNY 567

Query: 473  GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVL 532
            GVFPLRGKLLNVREAS +Q++ N+EI  IK+ILGL+ G +Y +  SLRYG +MIMTDQ  
Sbjct: 568  GVFPLRGKLLNVREASHDQIMKNAEIKAIKEILGLQHGKQYLDTNSLRYGSIMIMTDQ-- 625

Query: 533  LAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 592
                                      DHDGSHIKGL+INF+  F+PSLLKIP FLVEFIT
Sbjct: 626  --------------------------DHDGSHIKGLIINFLDHFYPSLLKIPGFLVEFIT 659

Query: 593  PIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITL 652
            PIV+   K  + +SF+++P+YE W+++  G    W IKYYKGLGTS S++ K YF+ +  
Sbjct: 660  PIVRC-RKGKQDISFFTIPEYETWRDAHNG-GKGWHIKYYKGLGTSESQDAKRYFRALEK 717

Query: 653  HKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELIL 712
            HK  F    D D E I+LAF+KKK + RK+WL QF PG +LD     I Y+DF+NKELIL
Sbjct: 718  HKLAFDVTRDGDRELIDLAFNKKKADDRKEWLRQFRPGTYLDHNTDRIPYADFINKELIL 777

Query: 713  FSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLA 772
            FSMAD  RSIPS +DGLKPGQRK+++  F R    E KV    G V   +AYHHGE +L+
Sbjct: 778  FSMADNLRSIPSAIDGLKPGQRKVMYVMFDRKSNSELKVNTLVGNVLGQAAYHHGEAALS 837

Query: 773  STILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKL 832
             TI+G+AQ+FVGSNN+NLL+P GQFGTR  GGKDAAS RYIFT L  I R LFP  DD L
Sbjct: 838  MTIVGLAQNFVGSNNVNLLEPRGQFGTRLLGGKDAASGRYIFTALPKIARALFPATDDAL 897

Query: 833  LDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMM 892
            LDYL +DGQ++EP WY+P++P VL+NG+EGIGTGWS+ +PNYNP +IVAN+RR + GE +
Sbjct: 898  LDYLEDDGQKVEPHWYIPVVPQVLLNGAEGIGTGWSTSVPNYNPHEIVANLRRRMAGEDV 957

Query: 893  EPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLES 952
             PM PWYRGF G +E+         + ++G + +++E T  I ELPIR WT +Y+E LE 
Sbjct: 958  VPMKPWYRGFNGDVEEFGPGR----FKISGRVTQIDEKTYEITELPIRTWTSNYKELLEE 1013

Query: 953  IIDQNDSF---IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHL 1009
             I  +D     I+ +++Y  ++TV+F V L+ +       +G+   FKL+  IST+NM L
Sbjct: 1014 RIVSSDKIPATIKDYKEYHTESTVNFIVELTAKGQAEIADKGVEAFFKLSCQISTTNMVL 1073

Query: 1010 FDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGE 1069
            FD  G IKKY + E+ILEEF+ +RL +Y+KRK+  ++ L+L   KL N+ RF+  +++ +
Sbjct: 1074 FDQDGKIKKYTSAEEILEEFYLLRLSYYQKRKEYLVDQLKLMYDKLSNQARFVQMIISRQ 1133

Query: 1070 IVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYD 1129
            +VV+NRKR D++ ELRQK F PFPK  K+  A      +  ++ + + +        D+D
Sbjct: 1134 LVVSNRKRADIVAELRQKDFRPFPKQGKASIAAEPEDDEAIDDEDISADS-------DFD 1186

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDA-LDMQLDELDKSD 1188
            YLL+MAI  LT EKV  LL +RD   EE+  L   +P++LW +DL   +++  + L + D
Sbjct: 1187 YLLNMAIYNLTKEKVDKLLKERDHKEEELKILIGRSPQNLWDEDLTKFIELWEEMLAEDD 1246

Query: 1189 ARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATE 1233
             R ++   K+K    G    K  + ++   AR+  KK  N+   E
Sbjct: 1247 RRLKDVVTKVK---KGKQSTKKTSAKSGAAARRVLKKPINSDGEE 1288


>gi|57898980|dbj|BAD86854.1| DNA topoisomerase II [Coprinopsis cinerea]
          Length = 1572

 Score = 1221 bits (3159), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1278 (49%), Positives = 848/1278 (66%), Gaps = 103/1278 (8%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K+  EMYQK +QLEHIL RPD+YIGSIE  T  +W Y+ E+K M+HR + YVPG +KI D
Sbjct: 97   KSTSEMYQKLTQLEHILKRPDSYIGSIETITTPMWTYDSETKRMVHREVKYVPGFFKIVD 156

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK  DP MD +KV ID E   ISV+N+G G+P+EIH +E +Y+PE+IFGHLL
Sbjct: 157  EILVNAADNKINDPSMDTLKVTIDVEEGTISVYNNGRGIPIEIHSKEKMYIPEMIFGHLL 216

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TS+NYDD+ KK TGGRNGYGAKL NI+S EF +ETAD    +KYKQ +T+NM K  +  I
Sbjct: 217  TSTNYDDDEKKLTGGRNGYGAKLANIYSLEFTVETADKNTSQKYKQTWTDNMSKCGKAKI 276

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +K   G+ +T+++F+PDL +F M  +++D V+L+K+RV D+AG + K VKV LN  R+ +
Sbjct: 277  TKNTRGEEYTRITFRPDLKRFGMNSIDEDTVSLLKRRVFDMAGTV-KDVKVFLNDERLKI 335

Query: 265  KSFAEYVDMYPKSV----------------TRFHERVNERWEICVTLS-EGQFQQVSFVN 307
            K+F +YV+MY  SV                T  HE++++RWEI  TLS EG FQ VSF N
Sbjct: 336  KNFKQYVEMYVSSVQEAAAEKSGGAAQPKQTVIHEQISDRWEIAYTLSTEGTFQHVSFAN 395

Query: 308  GIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
             IAT KGGTHV+Y+A+Q++  ++  ++KKNK A VK   ++NH+W+FV +LI NP FDSQ
Sbjct: 396  SIATSKGGTHVNYIADQISKALVTSISKKNKGATVKPAQIRNHMWLFVKSLIVNPTFDSQ 455

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
            TKE LTL  S FGSK  +S+EF+KKV AKSGIV+ +L+WA FK  + +K+ DGTK   + 
Sbjct: 456  TKELLTLPSSKFGSKPTISDEFIKKV-AKSGIVDNVLNWAKFKADQQMKRADGTKRSRLL 514

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
            G++KL DAN AG R+++ CTLILTEGDSAKALA+AGL VVGRD FGVFPLRGKLLNVREA
Sbjct: 515  GLAKLSDANNAGTRHAQDCTLILTEGDSAKALAIAGLGVVGRDNFGVFPLRGKLLNVREA 574

Query: 488  SSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
              +Q++ N EI NIKKI+GL+   +Y N  SLRYG LMIMTDQ                 
Sbjct: 575  RHDQIMKNEEIQNIKKIMGLQHNKDYTNTSSLRYGRLMIMTDQ----------------- 617

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSF 607
                       DHDGSHIKGL+INF+  F+PSLLKIP FLVEF+TPIV+   K  KV  F
Sbjct: 618  -----------DHDGSHIKGLIINFLDHFYPSLLKIPDFLVEFVTPIVRV-KKGNKVKDF 665

Query: 608  YSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA 667
            +++P+YE W E    +A  W  KYYKGLGTS  K+ +EYF  +  H   F    + D E 
Sbjct: 666  FTIPEYEQWLEETP-DARKWESKYYKGLGTSEDKDAREYFSKMEKHMIPFAPTQEGDREL 724

Query: 668  IELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVD 727
            I+LAFSKKK + RK+WL QF+PG  LD + + I YS+F+NKELILFSMAD  RSIPS+ D
Sbjct: 725  IDLAFSKKKADERKEWLRQFKPGTFLDHRLEEIPYSEFINKELILFSMADNVRSIPSIAD 784

Query: 728  GLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNN 787
            GLKPGQRK+++  FKR   KE KVAQ  GY+SEH+AYHHGE SLA+TI+ +AQD+VGSNN
Sbjct: 785  GLKPGQRKVIWGCFKRKLKKEIKVAQLVGYISEHAAYHHGEASLAATIINLAQDYVGSNN 844

Query: 788  INLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
            + LL PNGQ+GTR  GGKD A+ RYIFT    ITR ++   DD LL+YL +D   IEP W
Sbjct: 845  LALLSPNGQYGTREIGGKDHAAPRYIFTNAKSITRAIYHPFDDPLLNYLKDDDVPIEPEW 904

Query: 848  YMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIE 907
            YMP +P VL+NG+EGIGTGWS+ IP YNP DIVAN+RR++  E  EPM PW+RGF G + 
Sbjct: 905  YMPTVPMVLINGAEGIGTGWSTNIPPYNPVDIVANLRRMMKEEEPEPMTPWWRGFKGEVR 964

Query: 908  KTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID------------ 955
             T   +    Y V G+  ++N+TT+ I ELPI +WT+ +++ LE++I             
Sbjct: 965  PTGKGK----YDVVGVATKINDTTVEISELPIHKWTRTFKDELEAMITGEKKDKDKDKDK 1020

Query: 956  ---------QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN 1006
                     +N   ++ F+++ D+  V FEV ++ + + + +++GL++ F LTT +ST+N
Sbjct: 1021 DEDGKKDVVKNAGMVKDFKEHHDNLNVLFEVTMNPKDLEKAEEKGLVEFFGLTTKVSTTN 1080

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            M LFD +G IKKY+TPE+IL++F+ +RL +Y+KRK  Q   L     KL N++RFI  ++
Sbjct: 1081 MILFDFEGKIKKYETPEEILKDFYPMRLAYYQKRKDYQALELSTAYDKLNNQIRFIEMII 1140

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI 1126
              E+VV+NRK+ D++ ELR+  F PFPK +K+     A   +E EESE+  E        
Sbjct: 1141 KKELVVSNRKKADIVAELRKLNFRPFPKVAKT---KTAKPDEEEEESEDEEEESGSEAVT 1197

Query: 1127 DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
            D+DYLL MAI +LT E+++ L     +  +E+  L + +P  LW  DLD     L+E +K
Sbjct: 1198 DFDYLLGMAIYSLTRERIEKLKQQAHEKEQELLALLEKSPTDLWNTDLDKF---LEEWEK 1254

Query: 1187 SDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEM-----DNV 1241
             D    E++   KG G               N +K  +++   R +  MG       D+ 
Sbjct: 1255 -DCMIFEQK---KGEGGA------------VNGKKRKQRTLKTRKSIGMGRRGKDSDDDD 1298

Query: 1242 TKVVKPKGRAGLKKAPAE 1259
               +KP   A  K+ PAE
Sbjct: 1299 FVPIKP--NAAAKRKPAE 1314


>gi|401825934|ref|XP_003887061.1| DNA topoisomerase II [Encephalitozoon hellem ATCC 50504]
 gi|392998219|gb|AFM98080.1| DNA topoisomerase II [Encephalitozoon hellem ATCC 50504]
          Length = 1144

 Score = 1220 bits (3157), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1155 (53%), Positives = 804/1155 (69%), Gaps = 87/1155 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE YQKK+ +EHILLRPD+YIGS+E+  Q ++I++EES  MI++ I YVPGLYKIFD
Sbjct: 2    KTIEETYQKKTPVEHILLRPDSYIGSVEREAQQMYIWDEESGRMIYKNIEYVPGLYKIFD 61

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EI+VNAADNK RDPKM+ +KV ID E + ISV+N+G G+PV IH+EE VYVPELIFG+LL
Sbjct: 62   EIIVNAADNKIRDPKMNVIKVSIDPEKNEISVYNNGKGIPVRIHKEENVYVPELIFGNLL 121

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNY+D  KK TGGRNGYGAKL NIFS EF++ETAD +  K Y+Q + NNMG K EP I
Sbjct: 122  TSSNYNDEEKKVTGGRNGYGAKLCNIFSKEFVVETADCEVKKYYRQKYRNNMGIKEEPEI 181

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            S+  + D +T+++FKPDL +F M  L+DD+VAL+KKRV DL G + K VK+ LN  ++ +
Sbjct: 182  SRYTKED-FTRITFKPDLRRFKMDRLDDDIVALLKKRVYDLGGIV-KDVKIFLNEKKINI 239

Query: 265  KSFAEYVDMY-PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
            K F EYV +Y P      H+ +N+RWE+ +T SE QFQQVSFVN I T KGG+HV++V  
Sbjct: 240  KGFKEYVKLYVPPEANVVHQVINDRWELALTASEEQFQQVSFVNAICTTKGGSHVNHVVE 299

Query: 324  QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
            ++   +   + KK K  +VK   +K+ +++FVN LI+NPAFDSQTKE LTLR S+FGSKC
Sbjct: 300  RIVEPLSEAIQKKEKGLSVKPFQIKSCMFIFVNCLIENPAFDSQTKENLTLRVSAFGSKC 359

Query: 384  ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            +   +F+K V   + IV+ + S+A  +QS  LKK DG KT  + GI KLEDAN AG   S
Sbjct: 360  DPIGDFVKSVIKNTSIVQRVASFARARQSLQLKKTDGAKTSRLSGIPKLEDANFAGTSRS 419

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSAK LA++GLSVVGRD +GVFPLRGKLLNVREAS  Q++ NSEI +IKK
Sbjct: 420  KDCTLILTEGDSAKTLAVSGLSVVGRDIYGVFPLRGKLLNVREASHKQIMENSEISSIKK 479

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+    Y +  SLRYGH+MIMTDQ                            DHDGS
Sbjct: 480  ILGLQHNKVYEDTSSLRYGHVMIMTDQ----------------------------DHDGS 511

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
            HIKGL+INF+  F+PSLLKIP FL EFITPI++AT K G+V  F+++P+YE +K+S  G 
Sbjct: 512  HIKGLIINFLDHFYPSLLKIPGFLQEFITPIIRATKK-GQVRDFFTLPEYEEFKKSEEG- 569

Query: 624  ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
               W+IKYYKGLGTSTS + K+YF N+ +H K+F    D+D E I+LAF+KKK +ARK W
Sbjct: 570  ---WNIKYYKGLGTSTSADAKQYFSNLPIHVKNFTPLVDEDKELIDLAFNKKKADARKTW 626

Query: 684  LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
            LL FEPG  LDQ    I  SDFVNKELILFSMAD  RSIPS+VDGLKPGQRK++F  FKR
Sbjct: 627  LLSFEPGTFLDQSLPQISISDFVNKELILFSMADNIRSIPSLVDGLKPGQRKVMFSCFKR 686

Query: 744  NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
            N   E KVAQ  GYVSE SAYHHGEQSL STI+ +AQDFVGSNNINLL P GQFG+R QG
Sbjct: 687  NLRSEIKVAQLVGYVSEQSAYHHGEQSLCSTIVNLAQDFVGSNNINLLLPIGQFGSRLQG 746

Query: 804  GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
            GKDAAS RYIFT LSP+TR +F ++DD +L+YLN+D   IEP +Y+PIIP VLVNG+EGI
Sbjct: 747  GKDAASPRYIFTSLSPLTRLIFNENDDAILNYLNDDNLSIEPEFYVPIIPMVLVNGAEGI 806

Query: 864  GTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGI 923
            GTGWS+ IPN+NP DI+ N+RR++  E    M P+YR F GTIEK    +    + V+G+
Sbjct: 807  GTGWSTSIPNFNPIDIIENIRRMIRDEDPVEMTPYYRNFRGTIEKVGEGK----FQVSGV 862

Query: 924  IEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEES 983
             E   +  L I ELP+  WT +Y+EFLES++      ++ F++Y  + TV+F V L++  
Sbjct: 863  YE--GDMDLEITELPVGTWTLNYKEFLESLVQA--GVVKDFKEYHTEKTVNFTVKLAKH- 917

Query: 984  MMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKV 1043
                     +   KL TTI+ +NM  FD K  IKKY TP+ IL+EF+ +RL +Y  RK+ 
Sbjct: 918  ---------VSNLKLNTTITINNMVCFDEKLGIKKYSTPKDILKEFYDVRLRYYSIRKEN 968

Query: 1044 QLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVV 1103
             L+ ++ EL++LENKVRFI  V  G +V++ R+R +++ +L  +G+              
Sbjct: 969  MLKVMKEELVRLENKVRFIKEVSTGGLVISRRRRAEIVFDLEARGYA------------- 1015

Query: 1104 AGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
                                ++ DY+YLL M+I +LT E+++ L  +  K  EE + L  
Sbjct: 1016 --------------------KADDYEYLLGMSILSLTAERIEKLSNEHSKKLEEYNRLAG 1055

Query: 1164 ATPESLWVKDLDALD 1178
             TP+ LW++DLDA +
Sbjct: 1056 KTPKKLWLEDLDAFE 1070


>gi|389750841|gb|EIM91914.1| type II DNA topoisomerase [Stereum hirsutum FP-91666 SS1]
          Length = 1489

 Score = 1218 bits (3152), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1181 (52%), Positives = 808/1181 (68%), Gaps = 64/1181 (5%)

Query: 20   PTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGL 79
            P A  K   EMYQK SQLEHIL RPD+YIGS+E  TQ +W Y+ ++K M+ R + YVPG 
Sbjct: 21   PAAKKKNASEMYQKLSQLEHILKRPDSYIGSVETITQNIWTYDSDTKRMVLRDVKYVPGF 80

Query: 80   YKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELI 139
            +KI DEILVNAADNK  DP MD +KV ID E   ISV N+G G+P+EIH +E +Y+PE+I
Sbjct: 81   FKIVDEILVNAADNKINDPNMDTLKVEIDVESSSISVFNNGRGIPIEIHSKEKIYIPEMI 140

Query: 140  FGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
            FGHLL+SSNYDD+ KK TGGRNGYGAKL NI+S EF ++TAD    +KYKQ +++NMGK 
Sbjct: 141  FGHLLSSSNYDDDEKKLTGGRNGYGAKLANIYSHEFTVDTADKNSGQKYKQTWSDNMGKV 200

Query: 200  SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
             +  I+K   G+ +TKV+FKPDLA+F M  ++DD V+L+KKRV D+AG + K +KV LNG
Sbjct: 201  GKAKITKNARGEEYTKVTFKPDLARFGMDSIDDDTVSLLKKRVYDMAGTV-KDIKVFLNG 259

Query: 260  HRVPVKSFAEYVDMYPKSV----------------TRFHERVNERWEICVTLS-EGQFQQ 302
             R+ VK F  YV+MY  S                 +  +ER+N+RWE+    S EGQFQ 
Sbjct: 260  ERIKVKGFKSYVEMYLTSAAEAAAETSGGAAQAKPSFIYERINDRWEVAFACSLEGQFQH 319

Query: 303  VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNP 362
            VSF N I+TIKGGTHV  V++Q+A +++ VV  KNK A +    VK+ +WVFVN LI+NP
Sbjct: 320  VSFANSISTIKGGTHVTTVSDQIAKNIIQVVKSKNKGAQLTPAKVKDQMWVFVNGLIENP 379

Query: 363  AFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
             FDSQTKET+TL  S FGSK  LSE+FLKKV  KS ++E +L+WA FK  +++KK DGTK
Sbjct: 380  TFDSQTKETMTLPVSKFGSKPTLSEDFLKKVN-KSAVIERVLNWAQFKAQQEIKKTDGTK 438

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
               + G++KL DAN AG +N+ +CTLILTEGDSAKALA+AGL VVGRD FGVFPLRGK+L
Sbjct: 439  RTRLAGMTKLADANNAGTKNASKCTLILTEGDSAKALAVAGLGVVGRDNFGVFPLRGKML 498

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            NVREA  +Q++ N EI NIKKI+GL+   +Y+N  SLRYG LMIMTDQ            
Sbjct: 499  NVREAKHDQIMKNEEIQNIKKIMGLQSNKDYSNTSSLRYGRLMIMTDQ------------ 546

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG 602
                            DHDGSHIKGLLINF+  F+PSLLK+  FLVEF+TPIV+ T    
Sbjct: 547  ----------------DHDGSHIKGLLINFLDHFFPSLLKLDDFLVEFVTPIVRVTKGKD 590

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYK---GLGTSTSKEGKEYFQNITLHKKDFVW 659
            ++  F+++P+YE W E +  +A  W+ KYYK   GLGTS   + ++YF ++  H   F  
Sbjct: 591  RI-DFFTIPEYEKWLE-VTPDAHRWTSKYYKARLGLGTSKDSDARDYFSHMAKHMISFAP 648

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
              + D E I+LAFSKKK + RK+WL Q  PG  L+     I  +DF+NKELILFS AD  
Sbjct: 649  TAEGDRELIDLAFSKKKADERKEWLRQLRPGTFLNHDTDEISINDFINKELILFSYADNV 708

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIP + DGLKPGQRK+++  F+R    E KVAQ  GY+SEH+AYHHGEQSL  TI+ +A
Sbjct: 709  RSIPCVADGLKPGQRKVVWGCFRRKMRTEVKVAQLVGYISEHAAYHHGEQSLTQTIVNLA 768

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            QD+VG+NN+NLL PNGQ+GTR+QGGKD A+ RYIFT  + +TR +F   DD LL+YL +D
Sbjct: 769  QDYVGANNLNLLMPNGQYGTRDQGGKDHAAPRYIFTETAAVTRAIFHPADDPLLNYLKDD 828

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
               IEP WYMP++P VLVNG+EGIGTGWS+ IPNYNP +IV N+RR++ GE + PM PWY
Sbjct: 829  NDPIEPEWYMPVLPMVLVNGAEGIGTGWSTSIPNYNPEEIVDNLRRMMKGEDVVPMSPWY 888

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII-DQND 958
            RGF G I+KT   +    Y V G + +VN+TT+ I ELPI +WTQ Y+  LES+I ++ D
Sbjct: 889  RGFKGEIKKTGDNK----YDVFGCVRKVNDTTVEITELPIHKWTQTYKGELESMIGEKGD 944

Query: 959  SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKK 1018
              I+ ++++ D+T V F + ++ + + + + +GL++ FKLT  IST+NM  FD  G IKK
Sbjct: 945  GVIKDYKEHHDNTNVHFVINMAAKDLEKAEAQGLIEFFKLTGKISTNNMMCFDFDGKIKK 1004

Query: 1019 YDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRT 1078
            Y +PE+ILE+F+  RL +Y+KRK     +L+ +  KL N+ RFI  +V+ E+VV+NRK+ 
Sbjct: 1005 YTSPEEILEDFYPKRLAYYQKRKDHMAADLQNQFEKLSNQARFIQMIVSKELVVSNRKKA 1064

Query: 1079 DLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQ----SIDYDYLLSM 1134
            D++ ELR+  F PF   +K ++A  AG T  T E EE             + D+DYLL M
Sbjct: 1065 DIVQELRKHEFRPF---AKIVKARAAGETAPTVEEEEIEAAEREEAETGATTDFDYLLQM 1121

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            AI +LT EK+  LL       EE+  L K TP  +W  DLD
Sbjct: 1122 AISSLTKEKIARLLQQARDKEEELFQLLKLTPVEIWNTDLD 1162


>gi|302673662|ref|XP_003026517.1| hypothetical protein SCHCODRAFT_17796 [Schizophyllum commune H4-8]
 gi|300100200|gb|EFI91614.1| hypothetical protein SCHCODRAFT_17796 [Schizophyllum commune H4-8]
          Length = 1494

 Score = 1216 bits (3145), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1200 (51%), Positives = 823/1200 (68%), Gaps = 74/1200 (6%)

Query: 13   NNANVVGPTAP--NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIH 70
            N+A+ V PT+   NK+  E YQK +QLEHIL RPD+YIGS+E   Q +W Y+ E K M+H
Sbjct: 71   NDADGVDPTSSKKNKSASETYQKLTQLEHILKRPDSYIGSVETIQQPMWTYDAEKKRMVH 130

Query: 71   RTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQE 130
            RT+ YVPG +KI DEILVNAADNK  DP MD +KV  D + + ISV+N+G G+P+E+H  
Sbjct: 131  RTVKYVPGFFKIVDEILVNAADNKINDPSMDTIKVSYDLDENTISVYNNGKGIPIEMHSR 190

Query: 131  EGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQ 190
            E +Y+PELIFGHLL+SSNYDD+ KK TGGRNGYGAKL NI+S EF +ETAD    +KYKQ
Sbjct: 191  EKMYIPELIFGHLLSSSNYDDDEKKLTGGRNGYGAKLANIYSHEFTVETADKNTKQKYKQ 250

Query: 191  VFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLG 250
             +T+NM K  +P I+   +G+ +T+V+F+PDL +F M  +++D  +L+++RV DLAG + 
Sbjct: 251  TWTDNMSKCGKPKITSNGKGEEYTRVTFRPDLKRFGMDRIDEDTASLLQRRVYDLAGTV- 309

Query: 251  KSVKVELNGHRVPVKSFAEYVDMYPKSV----------------TRFHERVNERWEICVT 294
            K VKV LN  R+ +K+F +YV+MY  S                 T  HE + +RWE+  T
Sbjct: 310  KDVKVFLNDERLKIKNFKQYVEMYINSAQAEASEVSGGAAQTKPTIVHEILGKRWEVAFT 369

Query: 295  LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVF 354
            +SEG FQQVSF N IATIKGGTHV+ +A+Q+A +++A +NKKNK A VKA  +KNH+W+F
Sbjct: 370  VSEGTFQQVSFANSIATIKGGTHVNLIADQIAKNLLASINKKNKAATVKAPQIKNHMWIF 429

Query: 355  VNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKD 414
            VNALI+NP FDSQTKETLTL  S FG+K  LSE+F+KKV  KS +VE +L+WA FK  + 
Sbjct: 430  VNALIENPTFDSQTKETLTLPASKFGTKPVLSEDFMKKVQ-KSPLVENILNWAKFKADQQ 488

Query: 415  LKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGV 474
            +KK DG+K   + G+ KL DAN AG + ++ CTLILTEGDSAKALA+AGL VVGRD +GV
Sbjct: 489  IKKTDGSKRSRLTGLPKLSDANNAGTKYAKDCTLILTEGDSAKALAIAGLGVVGRDNYGV 548

Query: 475  FPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLA 534
            FPLRGKLLNVREA  +Q++ N EI NIKKILGL+   +Y ++ SLRYG LMIMTDQ    
Sbjct: 549  FPLRGKLLNVREARHDQIMKNEEIQNIKKILGLQHNKDYTDIASLRYGKLMIMTDQ---- 604

Query: 535  PLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITP 593
                                    DHDGSHIKGL++NF+  F+PSLLK+ P+FL+EFITP
Sbjct: 605  ------------------------DHDGSHIKGLILNFLDHFYPSLLKLDPAFLLEFITP 640

Query: 594  IVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLH 653
            IV+ T  N +   F+++P+YE W E+   +A  WS KYYKGLGTS   + ++YF +   H
Sbjct: 641  IVRVTKGNQRK-DFFTLPEYERWLETTP-DARKWSAKYYKGLGTSKDSDARDYFSHTEKH 698

Query: 654  KKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILF 713
               F    + D E I+LAFSKKK + RK+WL   +PG  L+     I  SDF+NKELILF
Sbjct: 699  VIPFAQTQEGDRELIDLAFSKKKADDRKEWLRTCKPGTFLNHDVDEIPISDFINKELILF 758

Query: 714  SMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAS 773
            SMAD  RSIPS+ DGLKPGQRKI++  FKR   KE KVAQ  GYVSEH+AYHHGEQSL  
Sbjct: 759  SMADNIRSIPSVADGLKPGQRKIIWGCFKRKLKKEIKVAQLVGYVSEHAAYHHGEQSLTM 818

Query: 774  TILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLL 833
            TI+ +AQD+VGSNNINLL PNGQ+GTR+QGGKD A+ARYIFT LSP+TR LF   D+ LL
Sbjct: 819  TIVNLAQDYVGSNNINLLMPNGQYGTRDQGGKDHAAARYIFTELSPLTRSLFNTADEPLL 878

Query: 834  DYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMME 893
                ED Q +EP +YMPIIP VLVNG++GIGTGWS+ IP+YNP DIVAN+RRL++GE   
Sbjct: 879  KQQKEDNQPVEPEYYMPIIPMVLVNGADGIGTGWSTSIPSYNPTDIVANIRRLMDGEEQV 938

Query: 894  PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI 953
            PM PW+RGF G I+ T   +    Y VTGI  ++N+T + I ELPI +WTQ+++  LE++
Sbjct: 939  PMFPWWRGFNGEIKSTGKNK----YDVTGIARKLNDTQVEITELPIHKWTQNFKAELETM 994

Query: 954  IDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
            +         + ++ D+T V F + +S   + + +++G ++ FKLT+ IST+NM  F+  
Sbjct: 995  MVSEKGEAPTYTEHHDNTNVHFIITMSATELKKAEEQGFVEYFKLTSKISTANMIAFNFD 1054

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G I KYD+PE+I+EEF+  RL +Y+KRK    + L+++L +L N+ RFI  +V+ +++V+
Sbjct: 1055 GKITKYDSPEEIVEEFYPQRLMYYQKRKDYLADELQVQLSRLNNQARFIQMIVDRQLIVS 1114

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLS 1133
            NRK+ D++ +LR+  F PFPK +K+ EA            E+ P V    +  +      
Sbjct: 1115 NRKKVDIVADLRKHDFRPFPKIAKAKEA-----------GEDEPTVEQEEEEEEDIDDDK 1163

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD-ELDKSDARAE 1192
             A     +E+++    D++   EE++ L   +P+ +W +DLD   +Q D  L + DA+ E
Sbjct: 1164 NA----HIERLRKQSQDKE---EELNTLLAKSPKQMWNEDLDDFLVQWDASLREWDAKKE 1216


>gi|440792851|gb|ELR14059.1| DNA gyrase/topoisomerase IV, A subunit [Acanthamoeba castellanii str.
            Neff]
          Length = 1559

 Score = 1216 bits (3145), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1196 (52%), Positives = 822/1196 (68%), Gaps = 53/1196 (4%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIE++YQKK+ LEH+LLRPDTY+GSIE   + +W+Y+E    M +R ISYVPGLYKIFD
Sbjct: 49   KTIEQIYQKKTPLEHVLLRPDTYVGSIESREEKMWVYDEVV-GMNYREISYVPGLYKIFD 107

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADN QRD  MD ++V I+ + + ISV N+G G+PVE+H EE ++VPELIFGHLL
Sbjct: 108  EILVNAADNFQRDKTMDKIQVTINADTNTISVWNNGQGIPVELHAEEKMHVPELIFGHLL 167

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD++ K TGGRNGYGAKL NIFS  F +E  D KR +K+   + +NM K+ EP I
Sbjct: 168  TSSNYDDDMNKVTGGRNGYGAKLANIFSKHFSVECLDSKRKRKFFMEWEHNMTKRHEPVI 227

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
                  +++T+VSF PDL +FNM   + D++AL  KRV D+AGC  K +KV LN   + +
Sbjct: 228  KSTATKNDYTQVSFTPDLKRFNMKSFDKDIIALFTKRVYDIAGCNPK-LKVYLNEQLIKI 286

Query: 265  KSFAEYVDMY--PKSVTRFHERVNERWEICVTLSE-GQFQQVSFVNGIATIKGGTHVDYV 321
             SF +YV++Y   K V    +++N+RW +CV LS  GQFQQVSFVN I T KGGTHV YV
Sbjct: 287  SSFEKYVELYFEKKDVPHVFQQINDRWSVCVALSSSGQFQQVSFVNSICTTKGGTHVKYV 346

Query: 322  ANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFG 380
             +++   +  ++NKKNK  A +K H +KN++WVFVN+LI NPAFDSQTKETLT + S FG
Sbjct: 347  TDKLTKELTPIINKKNKGGAEIKGHQIKNYIWVFVNSLIVNPAFDSQTKETLTSQASKFG 406

Query: 381  SKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGG 440
            SKCE+  +F+ KV  K  IVE ++ +A FKQ + L +  G+K   V GI KL+DAN AGG
Sbjct: 407  SKCEIPTDFVNKVVKKCAIVENVVQFAQFKQKQQLGRKGGSKKTRVSGIVKLDDANEAGG 466

Query: 441  RNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGN 500
            +N+++CTLILTEGDSAK LA++GLSVVGRDR+GVFPL+GK LNVREA+  Q+++N E G+
Sbjct: 467  KNADKCTLILTEGDSAKTLAVSGLSVVGRDRYGVFPLKGKPLNVREATHKQIMDNVEFGH 526

Query: 501  IKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDH 560
            I +ILGLK  ++Y + K LRYG LMIMTDQ                            DH
Sbjct: 527  IMEILGLKPNIKYESTKGLRYGRLMIMTDQ----------------------------DH 558

Query: 561  DGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESL 620
            DGSHIKGL+INF+H FWP LLK P FL EFITPIVKAT K  + +SFY+M +YE WKE  
Sbjct: 559  DGSHIKGLVINFVHHFWPDLLKTPGFLTEFITPIVKATKKK-ETISFYTMTEYETWKEE- 616

Query: 621  GGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEAR 680
              N   W IKYYKGLGTS+++E KEYF  +  HK DF W  D+DG+AI++AFSKK++E R
Sbjct: 617  NNNGQGWKIKYYKGLGTSSAQEAKEYFSELQRHKIDFAWGGDEDGDAIDMAFSKKRVEDR 676

Query: 681  KKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCS 740
            K W+ +FEPG  LDQ    + YSDF++KELI FS+AD  RSIPS+VDGLKPGQRKIL+  
Sbjct: 677  KTWISKFEPGTFLDQDVDELPYSDFIHKELIHFSIADCARSIPSLVDGLKPGQRKILYTC 736

Query: 741  FKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTR 800
              +N  +E +VAQ SG VS HSAYHHGE+SL   I+ MA +FVGSNNINLL P G FG+R
Sbjct: 737  LSKNIKEEIRVAQLSGSVSLHSAYHHGEESLNKAIVAMAHNFVGSNNINLLFPAGSFGSR 796

Query: 801  NQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGS 860
              GGKDAASARY+ TRL  ITR +F  DDDKLL+YL +DG  +EP +Y+PIIP  LVNG 
Sbjct: 797  LHGGKDAASARYLHTRLCEITRTIFHPDDDKLLNYLEDDGLPVEPEFYVPIIPLSLVNGG 856

Query: 861  EGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVT--Y 918
            EGIGTGWS+++PNYNPRDIV N++R+L  E  + M PWYR F G +      + G T  Y
Sbjct: 857  EGIGTGWSTFVPNYNPRDIVDNIKRMLRNETPKEMIPWYRAFEGQL---VEDKDGKTPRY 913

Query: 919  TVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID----QNDSFIRGFRQYSDDTTVD 974
             + GI  + +  TL I ELPI  WTQ +++FLE+++     +  + ++ + ++  D+ V 
Sbjct: 914  RILGIWNKPDPHTLEITELPIGVWTQGFKKFLETLLQPEKKRQYALVKDYTEHHTDSKVH 973

Query: 975  FEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRL 1034
            F + L++E+ +  + E + K+FKL+  IS +NMHLFD  G I +Y +   +L+EF+ +RL
Sbjct: 974  FVITLTDEASVFDESE-IEKQFKLSKYISMNNMHLFDRNGHIARYGSCMSVLQEFYDVRL 1032

Query: 1035 EFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPK 1094
            EFY+KRK   +  L  +L KL+N+VRFILGV+  EIVVNNRK+ +LL +L   GF  F  
Sbjct: 1033 EFYDKRKAHLIGTLNKQLSKLDNQVRFILGVIKKEIVVNNRKKVELLKQLEDMGFDKFEN 1092

Query: 1095 NSKSIEAVVAGATDETEESEENPEVVNGVQSID-----YDYLLSMAIGTLTLEKVQGLLA 1149
            ++K  +        +  ++E++ +     +S+      Y+YLL M I  LT+E+VQ L  
Sbjct: 1093 DAKEKKKKATSGKAKKGDAEDDDDEEGDSKSVKKAETGYNYLLGMPIWNLTMERVQKLQQ 1152

Query: 1150 DRDKLNEEVDDLRKATP-ESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNG 1204
             RD+  EE+D L KATP + LW +DLDA     +  ++     E + ++ K  G G
Sbjct: 1153 QRDEKQEELDTL-KATPIKDLWERDLDAFLEAFEAHEQEIRDIESQVLQTKKAGRG 1207


>gi|299755855|ref|XP_001828929.2| DNA topoisomerase II [Coprinopsis cinerea okayama7#130]
 gi|298411411|gb|EAU92936.2| DNA topoisomerase II [Coprinopsis cinerea okayama7#130]
          Length = 1557

 Score = 1213 bits (3138), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/1283 (49%), Positives = 848/1283 (66%), Gaps = 103/1283 (8%)

Query: 20   PTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGL 79
            PT+  +  EE  +  +QLEHIL RPD+YIGSIE  T  +W Y+ E+K M+HR + YVPG 
Sbjct: 77   PTSTARRQEEPDEPLTQLEHILKRPDSYIGSIETITTPMWTYDSETKRMVHREVKYVPGF 136

Query: 80   YKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELI 139
            +KI DEILVNAADNK  DP MD +KV ID E   ISV+N+G G+P+EIH +E +Y+PE+I
Sbjct: 137  FKIVDEILVNAADNKINDPSMDTLKVTIDVEEGTISVYNNGRGIPIEIHSKEKMYIPEMI 196

Query: 140  FGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
            FGHLLTS+NYDD+ KK TGGRNGYGAKL NI+S EF +ETAD    +KYKQ +T+NM K 
Sbjct: 197  FGHLLTSTNYDDDEKKLTGGRNGYGAKLANIYSLEFTVETADKNTSQKYKQTWTDNMSKC 256

Query: 200  SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
             +  I+K   G+ +T+++F+PDL +F M  +++D V+L+K+RV D+AG + K VKV LN 
Sbjct: 257  GKAKITKNTRGEEYTRITFRPDLKRFGMNSIDEDTVSLLKRRVFDMAGTV-KDVKVFLND 315

Query: 260  HRVPVKSFAEYVDMYPKSV----------------TRFHERVNERWEICVTLS-EGQFQQ 302
             R+ +K+F +YV+MY  SV                T  HE++++RWEI  TLS EG FQ 
Sbjct: 316  ERLKIKNFKQYVEMYVSSVQEAAAEKSGGAAQPKQTVIHEQISDRWEIAYTLSTEGTFQH 375

Query: 303  VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNP 362
            VSF N IAT KGGTHV+Y+A+Q++  ++  ++KKNK A VK   ++NH+W+FV +LI NP
Sbjct: 376  VSFANSIATSKGGTHVNYIADQISKALVTSISKKNKGATVKPAQIRNHMWLFVKSLIVNP 435

Query: 363  AFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
             FDSQTKE LTL  S FGSK  +S+EF+KKV AKSGIV+ +L+WA FK  + +K+ DGTK
Sbjct: 436  TFDSQTKELLTLPSSKFGSKPTISDEFIKKV-AKSGIVDNVLNWAKFKADQQMKRADGTK 494

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
               + G++KL DAN AG R+++ CTLILTEGDSAKALA+AGL VVGRD FGVFPLRGKLL
Sbjct: 495  RSRLLGLAKLSDANNAGTRHAQDCTLILTEGDSAKALAIAGLGVVGRDNFGVFPLRGKLL 554

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            NVREA  +Q++ N EI NIKKI+GL+   +Y N  SLRYG LMIMTDQ            
Sbjct: 555  NVREARHDQIMKNEEIQNIKKIMGLQHNKDYTNTSSLRYGRLMIMTDQ------------ 602

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG 602
                            DHDGSHIKGL+INF+  F+PSLLKIP FLVEF+TPIV+   K  
Sbjct: 603  ----------------DHDGSHIKGLIINFLDHFYPSLLKIPDFLVEFVTPIVRV-KKGN 645

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            KV  F+++P+YE W E    +A  W  KYYKGLGTS  K+ +EYF  +  H   F    +
Sbjct: 646  KVKDFFTIPEYEQWLEETP-DARKWESKYYKGLGTSEDKDAREYFSKMEKHMIPFAPTQE 704

Query: 663  QDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
             D E I+LAFSKKK + RK+WL QF+PG  LD + + I YS+F+NKELILFSMAD  RSI
Sbjct: 705  GDRELIDLAFSKKKADERKEWLRQFKPGTFLDHRLEEIPYSEFINKELILFSMADNVRSI 764

Query: 723  PSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDF 782
            PS+ DGLKPGQRK+++  FKR   KE KVAQ  GY+SEH+AYHHGE SLA+TI+ +AQD+
Sbjct: 765  PSIADGLKPGQRKVIWGCFKRKLKKEIKVAQLVGYISEHAAYHHGEASLAATIINLAQDY 824

Query: 783  VGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQ 842
            VGSNN+ LL PNGQ+GTR  GGKD A+ RYIFT    ITR ++   DD LL+YL +D   
Sbjct: 825  VGSNNLALLSPNGQYGTREIGGKDHAAPRYIFTNAKSITRAIYHPFDDPLLNYLKDDDVP 884

Query: 843  IEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGF 902
            IEP WYMP +P VL+NG+EGIGTGWS+ IP YNP DIVAN+RR++  E  EPM PW+RGF
Sbjct: 885  IEPEWYMPTVPMVLINGAEGIGTGWSTNIPPYNPVDIVANLRRMMKEEEPEPMTPWWRGF 944

Query: 903  GGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID------- 955
             G +  T   +    Y V G+  ++N+TT+ I ELPI +WT+ +++ LE++I        
Sbjct: 945  KGEVRPTGKGK----YDVVGVATKINDTTVEISELPIHKWTRTFKDELEAMITGEKKDKD 1000

Query: 956  --------------QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTT 1001
                          +N   ++ F+++ D+  V FEV ++ + + + +++GL++ F LTT 
Sbjct: 1001 KDKDKDEDGKKDVVKNAGMVKDFKEHHDNLNVLFEVTMNPKDLEKAEEKGLVEFFGLTTK 1060

Query: 1002 ISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRF 1061
            +ST+NM LFD +G IKKY+TPE+IL++F+ +RL +Y+KRK  Q   L     KL N++RF
Sbjct: 1061 VSTTNMILFDFEGKIKKYETPEEILKDFYPMRLAYYQKRKDYQALELSTAYDKLNNQIRF 1120

Query: 1062 ILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVN 1121
            I  ++  E+VV+NRK+ D++ ELR+  F PFPK +K+     A   +E EESE+  E   
Sbjct: 1121 IEMIIKKELVVSNRKKADIVAELRKLNFRPFPKVAKT---KTAKPDEEEEESEDEEEESG 1177

Query: 1122 GVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL 1181
                 D+DYLL MAI +LT E+++ L     +  +E+  L + +P  LW  DLD     L
Sbjct: 1178 SEAVTDFDYLLGMAIYSLTRERIEKLKQQAHEKEQELLALLEKSPTDLWNTDLDKF---L 1234

Query: 1182 DELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEM--- 1238
            +E +K D    E++   KG G               N +K  +++   R +  MG     
Sbjct: 1235 EEWEK-DCMIFEQK---KGEGGA------------VNGKKRKQRTLKTRKSIGMGRRGKD 1278

Query: 1239 --DNVTKVVKPKGRAGLKKAPAE 1259
              D+    +KP   A  K+ PAE
Sbjct: 1279 SDDDDFVPIKP--NAAAKRKPAE 1299


>gi|353242005|emb|CCA73780.1| probable DNA topoisomerase II [Piriformospora indica DSM 11827]
          Length = 1521

 Score = 1209 bits (3128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1199 (51%), Positives = 810/1199 (67%), Gaps = 106/1199 (8%)

Query: 24   NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
            NKT+ E YQK SQ+EHIL RPD+YIGS+E  TQA+W+Y+ E+K M+HR + YVPG +KI 
Sbjct: 118  NKTVTEQYQKLSQVEHILQRPDSYIGSVEPITQAMWVYDSENKRMVHRDVRYVPGFFKIV 177

Query: 84   DEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            DEILVNAADNK  D  MD +KV ID E  +ISV+N+G G+P+ +H+ E +Y+P+LIFG+L
Sbjct: 178  DEILVNAADNKVNDESMDTLKVTIDVEEGIISVYNNGRGIPIAMHETENMYIPQLIFGNL 237

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETA--DGKRL--KKYKQVFTNNMGKK 199
            LTSSNYDD+ KK TGGRNGYGAKL NI+S EF +ETA  DGK     KYKQV+TNNM   
Sbjct: 238  LTSSNYDDDEKKLTGGRNGYGAKLANIYSHEFTVETACRDGKGYDAAKYKQVWTNNMSNV 297

Query: 200  SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCL---------- 249
            S+P IS     + +T+++F+PDLA+F+M  +++D +AL+++RV D+AG +          
Sbjct: 298  SKPKISANPRDEEYTRITFRPDLARFHMDSIDEDTLALLQRRVYDMAGTMKTTNAEGKKH 357

Query: 250  GKSVKVELNGHRVPVKSFAEYVDMYPKSV---------------TRFHERVNERWEICVT 294
            GK VKV LN  R+ +KSF +YV+MY  S                T  HER+N+RWE+  T
Sbjct: 358  GKDVKVYLNNERIGIKSFKQYVEMYVSSAADNAAEQSGAASVKQTVVHERINDRWEVAFT 417

Query: 295  LSE-GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWV 353
            +S+ G FQQVSF N IATIKGGTHV  VA+Q+A  ++A V KKNK A VK   +KNH+W+
Sbjct: 418  ISDSGTFQQVSFANSIATIKGGTHVATVADQIAKSLLAAVQKKNKAATVKLPQIKNHMWL 477

Query: 354  FVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSK 413
            FVNALI+NP FDSQTKETLTL  S FGSK  LSE+F+K+V  K+ I++++L+WA +K  +
Sbjct: 478  FVNALIENPTFDSQTKETLTLPASKFGSKPTLSEDFIKRV-GKTSIIDSILNWAKYKADQ 536

Query: 414  DLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFG 473
             +KK DGTK   + G++KL DAN AG RN   CTLILTEGDSAKALA+AGLSVVGRD FG
Sbjct: 537  QIKKTDGTKRSRLNGMTKLCDANNAGSRNGSACTLILTEGDSAKALAVAGLSVVGRDNFG 596

Query: 474  VFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLL 533
            VFPLRGKLLNVREAS +Q++ N EI NIKKI+GL+   +Y + +SLRYG LMIM DQ   
Sbjct: 597  VFPLRGKLLNVREASHDQIMKNEEIQNIKKIMGLQHNKDYKSTESLRYGRLMIMADQ--- 653

Query: 534  APLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITP 593
                                     DHDGSHIKGLLINF   F+PSLLK+P FLVEF+TP
Sbjct: 654  -------------------------DHDGSHIKGLLINFFDHFYPSLLKLPEFLVEFVTP 688

Query: 594  IVKATNKNGKVL-SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITL 652
            IV+   K+GK   +F+++P+Y+ W E+   + S W+ KYYKGLGTS  ++ K YF ++  
Sbjct: 689  IVRV--KHGKTYKNFFTIPEYQQWAEA-HAHISGWTAKYYKGLGTSEDQDAKAYFSDMPT 745

Query: 653  HKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELIL 712
            H   F    ++D + I++AFSKKK+E RK+WL  F PG +L+     I YS+F+NKELIL
Sbjct: 746  HMIPFSKLREEDRQLIDMAFSKKKVEERKEWLRNFVPGTYLNHNRDEIPYSEFINKELIL 805

Query: 713  FSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLA 772
            FSMAD  RSIPSMVDGLKP QRK++F  FKR    E KV Q  GY+ EH+A+HHG+ SL 
Sbjct: 806  FSMADNARSIPSMVDGLKPSQRKVVFACFKRKLKGEIKVNQLMGYIGEHTAHHHGDASLH 865

Query: 773  STILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKL 832
             TI+ +AQ FVGSNNINLL P GQFGTR  GGKD A+ARYI TR   + R +F   DD L
Sbjct: 866  QTIVNLAQHFVGSNNINLLYPAGQFGTRAAGGKDHAAARYISTRPVDLARKIFNTSDDAL 925

Query: 833  LDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMM 892
            L+YL ED  +IEP WYMP +P VL+NG++GIGTGWS+ IPNYNP DI             
Sbjct: 926  LNYLTEDNLKIEPEWYMPTVPLVLINGADGIGTGWSTSIPNYNPVDI------------- 972

Query: 893  EPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLES 952
                       GTIEK  +K     YT TGI   ++  T+ I ELPIR+WT DY++ LE 
Sbjct: 973  -----------GTIEKADNKGK---YTCTGIARVIDSKTVEISELPIRKWTDDYKKQLED 1018

Query: 953  II---------------DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFK 997
             +                 +++FI+ +R+Y   T+V F V +SE+ + R ++EGL K FK
Sbjct: 1019 WVIGAEKDKSDKDKEKGKPSETFIKDYREYHTTTSVSFVVTMSEKDVARAEKEGLEKFFK 1078

Query: 998  LTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLEN 1057
            LT +ISTSNM  FDS G I KY+TPE ILE+F+H+RL++Y KRK+     +ELEL +L N
Sbjct: 1079 LTASISTSNMICFDSAGKIHKYETPEDILEDFYHLRLQWYAKRKQHVSNEMELELDRLNN 1138

Query: 1058 KVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENP 1117
            + RF+  +V+ ++VV NRK+ D++ ELR+  FTPFPK+ K+ +     A  E +  E++ 
Sbjct: 1139 QARFVQMIVDKKLVVANRKKEDIVKELRELQFTPFPKSPKTKKQDDTEAVVENDIDEDDV 1198

Query: 1118 EVVNGVQS-IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
             V+ G+ S  D+DYLL MAI  LT EK++ L A+  +  +++    K TP  LW  DLD
Sbjct: 1199 AVIKGLPSNSDFDYLLGMAIWNLTREKIEKLRANAKEQEDKLLAYLKLTPIDLWNSDLD 1257


>gi|298712279|emb|CBJ26730.1| DNA topoisomerase II [Ectocarpus siliculosus]
          Length = 1809

 Score = 1209 bits (3128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 633/1219 (51%), Positives = 822/1219 (67%), Gaps = 76/1219 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            +T+E+ YQKK+QLEHILLRPDTYIGS EK +Q +W+Y+E + +++ R +++VPGLYKIFD
Sbjct: 40   QTVEQRYQKKTQLEHILLRPDTYIGSTEKMSQEMWVYDEVADSIVKRAVTFVPGLYKIFD 99

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EI+VNAADNKQRD  M  +KV +D E   ISV N G G+P+++H+E  +YVPELIFG+LL
Sbjct: 100  EIIVNAADNKQRDENMSKLKVTVDAESGKISVWNDGAGIPIQMHKEHHIYVPELIFGNLL 159

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            T SN+DD+ KKTTGGRNG+GAKL NI+STEF++ETAD    K Y+QVF NNM +K  P I
Sbjct: 160  TGSNFDDDQKKTTGGRNGFGAKLANIYSTEFVVETADRDAGKHYRQVFRNNMQEKEAPEI 219

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLG----KSVKVELNGH 260
                EG ++T ++F PD  +F+MT +E D +AL++KRV D+AGC+G     SVKV L+  
Sbjct: 220  DCDYEGPDFTCITFTPDWKRFHMTGMEADTIALLRKRVYDMAGCMGGYAGASVKVYLDNR 279

Query: 261  RVPVKSFAEYVDMYPKSVTR-FHERVNERWEICVTLS-EGQFQQVSFVNGIATIKGGTHV 318
            RV V  F +Y+ MY    T    E + +RWE+ V +S +  FQQVS+VN I T+KGGTHV
Sbjct: 280  RVKVSGFKDYMSMYEGMETPVIFESIGDRWEVGVAVSADSVFQQVSYVNAICTVKGGTHV 339

Query: 319  DYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            + VANQV N ++ V+ +K+K A VK H VKNHL VFVN L++NPAF+SQ+KE LT + + 
Sbjct: 340  ECVANQVINKLLPVLKRKHK-AEVKGHFVKNHLCVFVNGLVENPAFNSQSKEALTSKDTL 398

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLA 438
            FGS  ++S+  LKK+  KS IV+ +LSWA  KQ++ L K  G K+  + GI+KL+DAN A
Sbjct: 399  FGSVPKISDAGLKKL-EKSEIVDRVLSWAKHKQNQQLNKKSGKKSSKLTGITKLDDANHA 457

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            G   S+ CTLILTEGDSAK LA++GL VVGRDR+GVFPL+GKLLNVREA+  QVL N EI
Sbjct: 458  GTAKSQDCTLILTEGDSAKTLAVSGLGVVGRDRYGVFPLKGKLLNVREATGPQVLKNEEI 517

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
             N+ KILGLK    Y++ K LRYGHLMIMTDQ                            
Sbjct: 518  QNVVKILGLKFNHTYDDTKQLRYGHLMIMTDQ---------------------------- 549

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKE 618
            DHDGSHIKGLLINF+H +WPSLLKI  FL EFITPIVK + K    LSFY++P+Y  WKE
Sbjct: 550  DHDGSHIKGLLINFVHHYWPSLLKIDGFLQEFITPIVKVS-KGRNELSFYTVPEYTVWKE 608

Query: 619  SLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE-LAFSKKKI 677
                N   W+ KYYKGLGTST+KE KEYF  +  H+ +F W+DD   + +  +AFSKK++
Sbjct: 609  G-HANGKGWNAKYYKGLGTSTAKEAKEYFAALDTHQLEFEWQDDDRDDDLIDMAFSKKRV 667

Query: 678  EARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKIL 737
            E RK+WL  F+ G H D   + + Y  F+NKELILFSM D +RSIP +VDG KP QRK+L
Sbjct: 668  EDRKEWLRGFKAGTHADYNVESVTYESFINKELILFSMEDNKRSIPCLVDGFKPSQRKVL 727

Query: 738  FCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQF 797
            F  FKRN  KE KV Q +GYVSEHSAYHHGE SL  TI  MAQ+F GSNN+NLL P GQF
Sbjct: 728  FSCFKRNLKKEIKVVQLAGYVSEHSAYHHGETSLNGTITAMAQNFTGSNNLNLLTPGGQF 787

Query: 798  GTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLV 857
            GTR  GGKDAAS RYIFT L    R +F  DDD LL YL++DG  IEP +YMPIIP +LV
Sbjct: 788  GTRLMGGKDAASPRYIFTALQKAARAVFHPDDDALLTYLDDDGLSIEPEFYMPIIPLILV 847

Query: 858  NGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIE-KTASKEAGV 916
            NGS+GIGTGWSS +PNY+P D++ N++R + G+    M PWY+GF G+IE K   K    
Sbjct: 848  NGSDGIGTGWSSNVPNYSPHDVIENLKRRIKGDKFVEMQPWYKGFAGSIEAKVGKKGFEG 907

Query: 917  TYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS----------------- 959
            +YTV GI   +++TT+ I ELP+R+WTQDY++FLES++   +                  
Sbjct: 908  SYTVRGIANRIDDTTVEITELPVRKWTQDYKQFLESLLPGAEDAKSKDAKGNGKGKGKGK 967

Query: 960  -----------FIRGFRQYSDDTTVDFEVFLSEESM-MRTKQEGLLKKFKLTTTISTSNM 1007
                        I+ F++   DTTV F V +S E +    K +GL K FKL +++ST+NM
Sbjct: 968  GAADKDKSPTRCIKDFKENHTDTTVHFTVTMSMEDLDALEKGDGLYKFFKLESSVSTNNM 1027

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVN 1067
             LFD  G +++Y++P+ I+EEF  +R EFY +RK   L  L+ E  KL+NKVRFIL VV 
Sbjct: 1028 VLFDQDGHLERYESPQHIMEEFITLRSEFYGRRKTSLLSKLQSEWSKLDNKVRFILAVVE 1087

Query: 1068 GEIVVNNRKRTDLLLELRQKGFTPF-PKNSKSIEAVVAGATDETEESEENPEVV---NGV 1123
              + VNNRK+++LL +L+++G+  F P  SK     VAG  ++ E  + N E     +  
Sbjct: 1088 DRMQVNNRKKSELLEQLKREGYDLFLPTTSK---LRVAGGAEDGEGEDGNEESAADDSDT 1144

Query: 1124 QSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
             S  YDYLL M I +LTLE+V+ L  + +   EE+  L+   P  LW+KDLDAL   LDE
Sbjct: 1145 LSKGYDYLLGMKIWSLTLERVKLLENELEGKAEEMRILKATAPSELWLKDLDALGDVLDE 1204

Query: 1184 LDKSDARAEEERMKIKGNG 1202
            +D    + E E  K + N 
Sbjct: 1205 IDDIIRKQEVEDTKQRKNA 1223


>gi|302202600|gb|ADL09409.1| DNA topoisomerase II [Omphalotus nidiformis]
          Length = 1557

 Score = 1206 bits (3120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1165 (52%), Positives = 805/1165 (69%), Gaps = 55/1165 (4%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            EMYQK SQLEHIL RPD+YIGS+E  TQA+W Y+ ++K M+HR + YVPG +KI DEILV
Sbjct: 120  EMYQKLSQLEHILKRPDSYIGSVETITQAMWTYDADTKRMVHREVKYVPGFFKIVDEILV 179

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNK  DP MD +KV ID E + ISV+N+G G+P+EIH +E +Y+PELIFGHLL+SSN
Sbjct: 180  NAADNKINDPSMDTLKVNIDIEENTISVYNNGKGIPIEIHSQEKMYIPELIFGHLLSSSN 239

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD+ KK TGGRNGYGAK  NI+S EF +ETAD    +KYKQ +T+NM K  +P I+K  
Sbjct: 240  YDDDEKKLTGGRNGYGAKHANIYSHEFTVETADKNTQQKYKQTWTDNMSKCGKPKITKNA 299

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
             G+ WT+V+F+PDL +F M  +++D   L++KRV D+AG + K VKV LN  R+ +K+F 
Sbjct: 300  RGEEWTRVTFRPDLKRFGMDRIDEDTAGLLRKRVFDMAGTV-KDVKVLLNDERLKIKNFR 358

Query: 269  EYVDMYPKSVTR----------------FHERVNERWEICVTLSEGQFQQVSFVNGIATI 312
            +YV++Y  S +                  +E+VN RWEI   +SEG F  VSF N IAT+
Sbjct: 359  QYVELYLHSASAEAAEHSGGAAQPKPSIIYEQVNARWEIAFAVSEGNFMHVSFANSIATV 418

Query: 313  KGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETL 372
            KGGTHV+ +A+Q+A +++  + KKNK A VKA  ++NH+W+F+N+LI+NP FDSQTKETL
Sbjct: 419  KGGTHVNLIADQIAKNLITSIGKKNKGAAVKAGQIRNHMWIFINSLIENPTFDSQTKETL 478

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKL 432
            TL  S FG+K  +SE+F+KKV  KS IVE +L+WA FK  + +KK DG+K   + G+ KL
Sbjct: 479  TLPASKFGTKPVVSEDFMKKVQ-KSPIVENILNWAKFKADQQIKKTDGSKRSRLTGLPKL 537

Query: 433  EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
             DAN AG + +  CTLILTEGDSAK+LA+AGL VVGR+ FGVFPLRGKLL+VREA  +Q+
Sbjct: 538  ADANNAGTKTARDCTLILTEGDSAKSLAVAGLGVVGRNNFGVFPLRGKLLSVREARHDQI 597

Query: 493  LNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            + N EI NIKKI+GL+   +YNNV SLRYG LMIMTDQ                      
Sbjct: 598  MKNEEIQNIKKIMGLQHNKDYNNVSSLRYGRLMIMTDQ---------------------- 635

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  DHDGSHIKGLLINF+  F+PSLLK+P FLVEF+TPI++ T  N +   F+++P+
Sbjct: 636  ------DHDGSHIKGLLINFLDHFYPSLLKVPDFLVEFVTPIIRVTKGNQRK-DFFTIPE 688

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            YE W E+  G A  WS KY+KGLGTST  + + YF N+  H   F    + D E IELAF
Sbjct: 689  YEQWLETTPG-ADKWSTKYFKGLGTSTDADARGYFSNMAKHMIPFAPTQEGDRELIELAF 747

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            SKKK + RK+WL QF+PG  L  +   I YS+FVNKELILFSMAD  RSIPS+ DGLKP 
Sbjct: 748  SKKKADERKEWLRQFKPGTFLGHRLDEIPYSEFVNKELILFSMADNIRSIPSIADGLKPD 807

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+++  FKRN  KE KV Q  GYVSEHS YHHG+ SL  TI+ +AQDFVGSNN+NLL 
Sbjct: 808  QRKVIWSCFKRNLKKEIKVIQLVGYVSEHSVYHHGDASLTQTIVALAQDFVGSNNLNLLV 867

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P GQ+GTR+ GGKD ASARYI T L PI+R +F  DDD +L    ++   IEP +YMPI+
Sbjct: 868  PCGQYGTRDMGGKDHASARYINTLLQPISRTIFNPDDDAILTPQTDENHVIEPEFYMPIV 927

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P VL+NG+EGIGTGWS+ +P +NP DIVAN+RRL+N E   PMHPW+RGF G I++TA  
Sbjct: 928  PMVLINGAEGIGTGWSTNVPGFNPLDIVANIRRLMNNEEQVPMHPWWRGFKGEIKQTAKN 987

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDD 970
            +    Y VTG++ +V++TT+ I ELPI +WTQ ++  LE+++  ++ +  ++ ++++  +
Sbjct: 988  K----YDVTGVVTKVDDTTVEITELPIHKWTQTFKTELETMLVGEKGEGSVKNYQEHHAN 1043

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
              V F V +  + +++ +++GLL+ FKLT+ I+TSNM  FD  G IKKY++PE IL+EF+
Sbjct: 1044 ENVHFVVQMDAKELVKAEEKGLLEYFKLTSKITTSNMICFDFDGKIKKYESPEAILDEFY 1103

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +RL +Y+KRK      L++   +L N+ RF+  +V  ++ V+ RKR D++++L++  F 
Sbjct: 1104 AVRLGYYQKRKDHLASQLQMVFERLSNQARFVQMIVEKKLAVSGRKRADIVVDLKKHDFK 1163

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLAD 1150
            PFPK      +V   A DE EE  +      G  S DYDYLLSM I  LT EK + L   
Sbjct: 1164 PFPKKKAKTTSVGPEAEDEEEEDPDAGTEAEGSAS-DYDYLLSMPIWNLTKEKFEKLRKQ 1222

Query: 1151 RDKLNEEVDDLRKATPESLWVKDLD 1175
                  E+  L + TP+ LW  DLD
Sbjct: 1223 AADQEAELLRLLEKTPKDLWNADLD 1247


>gi|427791141|gb|JAA61022.1| Putative dna topoisomerase type ii, partial [Rhipicephalus
            pulchellus]
          Length = 1662

 Score = 1205 bits (3118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 648/1283 (50%), Positives = 851/1283 (66%), Gaps = 147/1283 (11%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYE-EESKTMIHRTISYVPGLYKIFD 84
            ++E +YQKKSQLEHILLRPDTYIGS+E  TQ +W+Y+ EE+  M +R+I++VPGLYKIFD
Sbjct: 93   SVERIYQKKSQLEHILLRPDTYIGSVEPVTQNMWVYDGEENGGMKNRSITFVPGLYKIFD 152

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRD  MD +K+ ID E + IS+ N+G G+PV  H+ E ++VP LIFGHLL
Sbjct: 153  EILVNAADNKQRDKNMDCIKIEIDAEQNRISIWNNGKGIPVVEHKVEKMFVPTLIFGHLL 212

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNY+D  KK TGGRNGYGAKL NIFST+F +ET      K +KQV+ +NM K ++P I
Sbjct: 213  TSSNYNDEEKKVTGGRNGYGAKLCNIFSTKFTVETYSRSEKKLFKQVWEDNMKKTTDPKI 272

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
                +GD++TK++F PDLAKF M  L+ D VAL+ +R  D+AGC  + VKV LNG R+PV
Sbjct: 273  RTEPKGDDFTKITFNPDLAKFKMEKLDPDTVALLSRRAYDVAGCT-RGVKVYLNGKRLPV 331

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSE------------------- 297
            K F +Y  ++ K         +T  +E VN+RWE+ VTLSE                   
Sbjct: 332  KGFKDYTQLFVKDKEDEAGNPLTVVYESVNDRWEVAVTLSESGDFRQMSFVNSIATTKGG 391

Query: 298  ---------------------GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK 336
                                 G F+Q+SFVN IAT KGG+HVDYVA+Q+   ++ +V KK
Sbjct: 392  XXVVYESVNDRWEVAVTLSESGDFRQMSFVNSIATTKGGSHVDYVADQLVKKILEIVKKK 451

Query: 337  NKNANVKAHN--VKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVT 394
            NK A VK  N  VK+HLWVFVN LI+NP FDSQTKE +TL+   FGSKCELS++F  +V 
Sbjct: 452  NK-AGVKIQNKQVKDHLWVFVNCLIENPTFDSQTKENMTLQVKKFGSKCELSDKFYNQVL 510

Query: 395  AKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEG 453
             K G+VE ++SW NFK  K L +K    K   ++GI KLEDAN AG RNS  CTLILTEG
Sbjct: 511  -KCGVVEAVMSWVNFKAQKQLGQKCSAKKHSKLKGIPKLEDANDAGTRNSVDCTLILTEG 569

Query: 454  DSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEY 513
            DSAK+LA++GL+VVGRD+FGVFPL+GK+LNVREA+  Q+L N+EI N+ KI+GL+   +Y
Sbjct: 570  DSAKSLAVSGLAVVGRDKFGVFPLKGKILNVREATHKQILENAEINNVIKIMGLQYKKKY 629

Query: 514  NNV---KSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLI 570
             +V   K+LRYG LMIMTDQ                            D DGSHIKGLLI
Sbjct: 630  ESVEDLKTLRYGRLMIMTDQ----------------------------DQDGSHIKGLLI 661

Query: 571  NFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIK 630
            NFIH  WPSLLK+P FL EFITPIVKAT K    LSFYS+P++E WK +   +   W +K
Sbjct: 662  NFIHHNWPSLLKLP-FLEEFITPIVKAT-KGKTELSFYSLPEFEEWKAATD-DWQRWKVK 718

Query: 631  YYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-- 688
            YYKGLGTST+KE KEYF ++  H+  F ++  +D  AIELAFSKK IE RK+WL      
Sbjct: 719  YYKGLGTSTAKEAKEYFIDMARHRIKFKYQGGEDDRAIELAFSKKMIEQRKEWLRNGMEE 778

Query: 689  ---------PGNHLDQKE-KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 738
                     P  +L  K+ + I Y DFVNKELILFS  D +RSIPS+VDGLKPGQRK+L+
Sbjct: 779  RKQRRELGLPEVYLYGKDTRNITYEDFVNKELILFSNMDNERSIPSLVDGLKPGQRKVLY 838

Query: 739  CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFG 798
              FKRN  +E KVAQ +G V+EHSAYHHGE SL STI+ +AQ+FVGSNNINLLQP GQFG
Sbjct: 839  TCFKRNDKREIKVAQLAGSVAEHSAYHHGEVSLMSTIINLAQNFVGSNNINLLQPIGQFG 898

Query: 799  TRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVN 858
            TR QGGKDAAS RYIFT LSP+ R + P  DD +LDYL +D Q+IEP +Y+PI+P VLVN
Sbjct: 899  TRLQGGKDAASPRYIFTMLSPLARLIMPASDDPILDYLFDDNQRIEPEYYIPILPMVLVN 958

Query: 859  GSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTY 918
            G+EGIGTGWS+ IPNYNPR+IVAN+R++LNGE  +PM PW++ F G++++   +     +
Sbjct: 959  GAEGIGTGWSTKIPNYNPREIVANLRKMLNGEETKPMKPWFKNFRGSVDQVEPQR----F 1014

Query: 919  TVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIID---------------QNDSFIR 962
             ++G +  ++ TT+ I ELP+R WTQ Y+E  LE+++                  D+ +R
Sbjct: 1015 LISGEVAILSSTTIEITELPVRTWTQAYKESVLEAMLHGSEKVPPLITDYKEYHTDTTVR 1074

Query: 963  -------------------GFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTIS 1003
                                +++Y  DTTV F V ++EE + + + EGL K FKL T+++
Sbjct: 1075 FVVTMTEXHGSEKVPPLITDYKEYHTDTTVRFVVTMTEEKLSKARDEGLHKVFKLQTSLT 1134

Query: 1004 TSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFIL 1063
            TS+M LFDSKGV+  + TPE+IL++F+  RLE Y+KRK   +  L  E  KLEN+ RFIL
Sbjct: 1135 TSSMVLFDSKGVLTTFRTPEEILKDFYETRLEGYKKRKAYMMGLLSAEAKKLENQARFIL 1194

Query: 1064 GVVNGEIVVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEESEENPEV 1119
              ++  I + NR+R +++L LR++G+ P P    K  ++ +     + D+ E+ +++ + 
Sbjct: 1195 EKIDNLIKIENRRRKEMILTLRERGYDPDPIVEWKKQQAQQDDKQDSQDDEEDEDKDEDK 1254

Query: 1120 VNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
              G  S  Y+YLL M + +LT E+ + LLA RD+   EV+ LR+ TPE+LW +DLDA   
Sbjct: 1255 DGG--SASYNYLLGMPLWSLTRERKEDLLAKRDQKRAEVETLRRKTPENLWEEDLDAFMT 1312

Query: 1180 QLDELDKSDARAEEERMKIKGNG 1202
            +LDE++K + R EE     K  G
Sbjct: 1313 KLDEVEKIE-RDEESSTGAKAAG 1334


>gi|378727259|gb|EHY53718.1| DNA topoisomerase II [Exophiala dermatitidis NIH/UT8656]
          Length = 1661

 Score = 1203 bits (3113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1171 (52%), Positives = 800/1171 (68%), Gaps = 59/1171 (5%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K + E YQK +QLEHI+ RPDTYIGS+E+  + +W+Y  E  +M  R +SYVPG++KIFD
Sbjct: 128  KRVSEQYQKLTQLEHIIKRPDTYIGSVERTEKQMWVYNTEQDSMEFREVSYVPGIFKIFD 187

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQ D  MD ++V ID+    ISV N+G G+P+EIH +E +Y+PE+IFGHLL
Sbjct: 188  EILVNAADNKQNDKTMDEIRVTIDRGKGEISVWNNGRGIPIEIHSKEKIYIPEMIFGHLL 247

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            T SNYDDN +K TGGRNGYGAKL NIFSTEF +ETAD ++ KKYKQ++T NM +  +  I
Sbjct: 248  TGSNYDDNEQKITGGRNGYGAKLCNIFSTEFTVETADSRQKKKYKQIWTKNMSQMGKAKI 307

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +   +G+++TKV+F PD  KF M  ++DD+ AL K+RV DLAG   K V V+LNG RVPV
Sbjct: 308  TDTTKGEDFTKVTFHPDFEKFGMDAMDDDLEALFKRRVYDLAGTC-KGVAVKLNGSRVPV 366

Query: 265  KSFAEYVDMYPKSVT--RFHERVNE-----------RWEICVTLSEGQFQQVSFVNGIAT 311
            ++F +Y +MY K++   R  E  N+           RWEI   +S+G FQQVSFVN IAT
Sbjct: 367  RNFKKYCEMYTKAIKKERGEEAANDSSEIITESPDPRWEIGFAVSDGSFQQVSFVNSIAT 426

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNANV-KAHNVKNHLWVFVNALIDNPAFDSQTKE 370
              GGTHV+Y+A+Q+ N +M +V KKNK   V K + ++NH+++FVNALI NPAF SQTKE
Sbjct: 427  TSGGTHVNYIADQIVNRLMDIVKKKNKGGAVLKPNQIRNHIFIFVNALIVNPAFTSQTKE 486

Query: 371  TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGIS 430
             LT + S FGSKC++SEEF+KKV AK+ ++  +L +A  K  + LKK+DG++   +    
Sbjct: 487  QLTTKPSQFGSKCQVSEEFMKKV-AKTEVINNILHFAQQKADQILKKSDGSRRSRMNN-P 544

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KL DAN AG R   +CTLILTEGDSAK LA+AG +VVG D FGVFPLRGKLLNVR+AS +
Sbjct: 545  KLTDANKAGTREGHKCTLILTEGDSAKGLALAGRAVVGPDLFGVFPLRGKLLNVRDASID 604

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            Q+  N+EI NIK  LGL+    Y +   LRYGHLMIMTDQ                    
Sbjct: 605  QISKNAEIQNIKNFLGLQHKKVYTDTHGLRYGHLMIMTDQ-------------------- 644

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS---- 606
                    DHDGSHIKGLLINF+   +PSLLKIP FLVEFITPIVK    + K  S    
Sbjct: 645  --------DHDGSHIKGLLINFLQVQFPSLLKIPKFLVEFITPIVKVYRGDPKNPSQSRA 696

Query: 607  FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
            FY+MP+YEAWKE+   +   W  KYYKGLGTSTS++ ++YF +I  H K+F    D++  
Sbjct: 697  FYTMPEYEAWKEA-HKHERGWEHKYYKGLGTSTSEDAQQYFNDIDKHHKEFDVMKDEEAS 755

Query: 667  AIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
             IELAFSKKK + RK+WL QF+ G +LD   K I YSDFVNKELILFSMAD  RSIPS+V
Sbjct: 756  LIELAFSKKKADERKEWLRQFKAGTYLDHSAKIISYSDFVNKELILFSMADNVRSIPSVV 815

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DGLKPGQRK+++  FKRN  K+ KVA+ +G VS  +AYHHGE SL  TI+G+AQDFVGSN
Sbjct: 816  DGLKPGQRKVMYACFKRNLKKDMKVAELAGLVSGMTAYHHGEASLQQTIVGLAQDFVGSN 875

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            N+NLL+P+GQFGTRNQGG D ASARYI TRLSP  R LF  DD+ LL Y  +D + IEP 
Sbjct: 876  NVNLLEPSGQFGTRNQGGNDCASARYIHTRLSPFARKLFHTDDEALLKYNTDDERTIEPE 935

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI 906
             Y PIIP VLVNG++GIGTGWSSYIPNYNP DIV N++R +NGE  +PM PWYRGF G +
Sbjct: 936  VYAPIIPMVLVNGADGIGTGWSSYIPNYNPEDIVENLKRRMNGEDWKPMQPWYRGFKGEV 995

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGF 964
            +          +  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ +
Sbjct: 996  KAGGPDR----FLFSGIIKQTADNEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDY 1051

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
            + Y+   TV F + L E+ M    +EGL++KFKLT +I+TSN+  FD +G I KY   E 
Sbjct: 1052 KDYNTHETVHFVIQLDEKHMKSAVEEGLVEKFKLTKSIATSNLVAFDPEGRITKYANVEA 1111

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            I++EF+  RL+ Y KRK+  LE++   L +L N+ RF+  +++G++ ++ +K+  L+ EL
Sbjct: 1112 IMDEFYRYRLQMYAKRKEWLLEDMNKTLRRLTNQARFVQMIIDGKLNISKKKKAVLVAEL 1171

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            ++ GF  +P   K+++A          E +   E    V +  YDYLL M + +LT E+V
Sbjct: 1172 KKLGFDAYP---KTVDASKQNEILPVAEEDAEDEDEGSVDASAYDYLLGMPLWSLTQERV 1228

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            + LL        EVD L K + E LW +DLD
Sbjct: 1229 EKLLRQIGDKEAEVDALMKKSKEDLWREDLD 1259


>gi|224007445|ref|XP_002292682.1| DNA topoisomerase [Thalassiosira pseudonana CCMP1335]
 gi|220971544|gb|EED89878.1| DNA topoisomerase [Thalassiosira pseudonana CCMP1335]
          Length = 1230

 Score = 1203 bits (3112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1186 (51%), Positives = 816/1186 (68%), Gaps = 71/1186 (5%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEI 86
            IEE YQKK+QLEHILLRPDTYIGS E  TQ +++   E+  +  R ++Y PGLYKIFDEI
Sbjct: 41   IEETYQKKTQLEHILLRPDTYIGSTEPLTQPMFVLNAETNRIAQRDVTYTPGLYKIFDEI 100

Query: 87   LVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
            +VNAADNKQRDP MD ++V +D E   ISV N+G G+PV +H+E   YVP LIFGHLLT 
Sbjct: 101  VVNAADNKQRDPNMDRMEVTVDAESGTISVLNNGKGIPVVMHKEHNCYVPTLIFGHLLTG 160

Query: 147  SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            SN+DD+ KKTTGGRNGYGAKL NIFSTEFI+E  D     K+KQVF NNM  K +P + K
Sbjct: 161  SNFDDDEKKTTGGRNGYGAKLANIFSTEFIVECVDSNEGMKFKQVFRNNMHVKEDPKVKK 220

Query: 207  C-----KEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCL----GKSVKVEL 257
            C     K+GD +TK++FKPDL +FNMT L+ D V L+ KR  D+AG +    GK + V L
Sbjct: 221  CTAAELKKGD-YTKITFKPDLNRFNMTSLDTDTVGLLSKRAYDIAGSMANKEGKKLSVYL 279

Query: 258  NGHRVPVKSFAEYVDMY----PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIK 313
            NG ++PVK F  Y+ ++    P +    +E+V +RWE+ +++S+G FQQ+SFVN IAT K
Sbjct: 280  NGKKLPVKDFKSYLALFDGITPPAA---YEKVGDRWEVGISVSDGSFQQISFVNAIATTK 336

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKNAN-VKAHNVKNHLWVFVNALIDNPAFDSQTKETL 372
            GG HV+Y+A+QVA  + A V KKNK    +K + +KNHL VFVN L++NP FDSQTKE L
Sbjct: 337  GGGHVNYIADQVAKSLQASVKKKNKGGTEIKPNQIKNHLSVFVNCLVENPTFDSQTKENL 396

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKL 432
            T R S+FG + +LS++F+K+V  K G+V+ ++S+A FKQ++ LK+  GTK   + GI+KL
Sbjct: 397  TTRPSAFGKEGQLSDKFMKQV-EKCGVVDAIMSYAKFKQNQALKRKGGTKKTKLTGITKL 455

Query: 433  EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
            +DAN AG   S+ CTLI+TEGDSAK+LA++GLSVVGRD +GVFPL+GK LNVR+A+ +Q+
Sbjct: 456  DDANNAGTAKSKDCTLIITEGDSAKSLAVSGLSVVGRDFYGVFPLKGKPLNVRDATHSQI 515

Query: 493  LNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            + N EI N+ +I+GLK G  Y   N+KSLRYGHLMIM DQ                    
Sbjct: 516  MKNEEIMNLVEIMGLKFGTTYTEENIKSLRYGHLMIMADQ-------------------- 555

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                    DHDGSHIKGL+INFIH FWPSLL IP FL++FITPIVK T K  K  +F+++
Sbjct: 556  --------DHDGSHIKGLIINFIHHFWPSLLDIPDFLMQFITPIVKCT-KGKKSHTFFTL 606

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD---QDGEA 667
            P+YE WKE  G +A  W+IKYYKGLGTSTS E KEYF N+ +H+   + ++D        
Sbjct: 607  PEYEEWKEGTGNDAKGWTIKYYKGLGTSTSSEAKEYFSNLDIHE---ILDNDAITSGAGL 663

Query: 668  IELAFSKKKIEARKKWLLQFEPGNHLD---QKEKYIKYSDFVNKELILFSMADLQRSIPS 724
            I++AFSK K+E RKKWL + E    L+    +   + YS+F+N+EL+LFS  D  RSIP 
Sbjct: 664  IDMAFSKSKVEERKKWLNRVEKDTFLNYSAAQRNGVNYSEFINRELVLFSQYDNVRSIPH 723

Query: 725  MVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVG 784
            ++DG KP QRK+L+  FK+    E KVAQ +GY+ EHSAYHHG+ SL  TI+GMAQ + G
Sbjct: 724  IMDGFKPSQRKVLYACFKKKLKAEIKVAQLAGYIGEHSAYHHGDMSLNGTIIGMAQSYCG 783

Query: 785  SNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIE 844
            SNN+NLL P+GQFGTR  GGKD ASARYIFTRL  I R +F  DDD LL+YLN+DG  IE
Sbjct: 784  SNNLNLLYPSGQFGTRRMGGKDHASARYIFTRLEKIARAIFHPDDDALLNYLNDDGLSIE 843

Query: 845  PTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGG 904
            P +YMP+IP VLVNGS+GIGTGWSS I N++PR+++AN+++++NGE  E MHP + G+ G
Sbjct: 844  PEYYMPVIPMVLVNGSDGIGTGWSSTIQNHDPREVIANIKKMINGEEPELMHPHFAGYTG 903

Query: 905  TIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII---DQNDSFI 961
             I   +    G +Y V G IE   +TTL I ELPI +WTQDY+ FLE ++   D++ S I
Sbjct: 904  EITAESGSREG-SYIVEGKIERTGDTTLLITELPIGKWTQDYKGFLEGLMIGTDKSPSEI 962

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQE--GLLKKFKLTTTISTSNMHLFDSKGVIKKY 1019
              F++   DTTV F V  S++++ + ++E  GL+ KFKL+TTIST NM LFD+ G I KY
Sbjct: 963  SDFKENHTDTTVSFTVTASKDAIDKFEKEKGGLVGKFKLSTTISTKNMTLFDTNGKIHKY 1022

Query: 1020 DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTD 1079
                 IL  FFH RLE+Y KRK + LE +  EL   +NK RF+  V  G++VV+NRKR +
Sbjct: 1023 KASVDILRTFFHHRLEYYVKRKDMLLEKMRRELKVYDNKARFVEEVCKGDLVVSNRKRAE 1082

Query: 1080 LLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            LL +L+ +G+  +P+  K  E      T   EE   + E+  G     Y+YLL M I +L
Sbjct: 1083 LLADLQLRGYDLYPREVKKSETEEEDDT-SVEEDASDAELAKG-----YEYLLGMKIWSL 1136

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELD 1185
            T E+ + L   + +  +EV+ L   +PE++W+ DL+A++  LDE D
Sbjct: 1137 TFERAEELRRQKAEKADEVEKLEGTSPEAIWMTDLEAIEEALDERD 1182


>gi|296809619|ref|XP_002845148.1| DNA topoisomerase II [Arthroderma otae CBS 113480]
 gi|238844631|gb|EEQ34293.1| DNA topoisomerase II [Arthroderma otae CBS 113480]
          Length = 1676

 Score = 1201 bits (3106), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 650/1385 (46%), Positives = 888/1385 (64%), Gaps = 100/1385 (7%)

Query: 8    PLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT 67
            PL    N + +  TA      E YQK +QLEHIL RPDTYIGS+E+  + +W+Y   ++ 
Sbjct: 106  PLANVENESFITETAEGGGSSEKYQKITQLEHILKRPDTYIGSVERTEKQMWVYNSTTEL 165

Query: 68   MIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEI 127
            M +R +SYVPGLYKIFDEILVNAADNKQ DP M+ ++V +D+E   ISV N+G G+PVE+
Sbjct: 166  MEYREVSYVPGLYKIFDEILVNAADNKQNDPNMNEIRVTLDKEGGEISVWNNGRGIPVEV 225

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
            H +E +Y+PELIFGHLLTSSNY+D  +K TGGRNGYGAKL NIFS EF IETAD +  KK
Sbjct: 226  HSKEKIYIPELIFGHLLTSSNYNDQQEKVTGGRNGYGAKLCNIFSNEFTIETADSRTKKK 285

Query: 188  YKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
            +K  +TNNM    +P I++CK GD++TKV+FKPD AKF M  ++DD  AL+K+RV D+AG
Sbjct: 286  FKLTWTNNMSAMGKPKITECK-GDDYTKVTFKPDFAKFGMEGMDDDFEALVKRRVYDMAG 344

Query: 248  CLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR-------------FHERVNERWEICVT 294
              G +VK  LNG ++PVKSF +Y++MY K++                 E  + RWEI  T
Sbjct: 345  TCGTAVK--LNGTKIPVKSFKKYMEMYTKAIKTERGEDPTSDKNDIITESPDRRWEIGFT 402

Query: 295  LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWV 353
            +S+G FQQVSFVN IAT  GGTHV+Y+++Q+ N +   + KKNK  A +KA  +KNH+++
Sbjct: 403  VSDGSFQQVSFVNSIATTSGGTHVNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFL 462

Query: 354  FVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSK 413
            FVN  I NPAF SQTKE LT R S FGSKC +S+EFLKKV  K+ +++ +L +A  K  +
Sbjct: 463  FVNCQIVNPAFTSQTKEQLTTRSSQFGSKCIVSDEFLKKVM-KTRVMDDILHFAEKKADQ 521

Query: 414  DLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFG 473
             LKK DG +   +    KL DAN AG +    CTLILTEGDSAK LAMAG +VVG D FG
Sbjct: 522  ILKKTDGNRRSRMNN-PKLTDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFG 580

Query: 474  VFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLL 533
            VFPLRGKLLNVR+AS +Q+  N+EI NIK  +GL+   EY + + LRYGHLMIMTDQ   
Sbjct: 581  VFPLRGKLLNVRDASVDQISKNAEIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ--- 637

Query: 534  APLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITP 593
                                     DHDGSHIKGLLIN++   +P+LLKIP FL+EFITP
Sbjct: 638  -------------------------DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITP 672

Query: 594  IVKATNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
            IVK    + K      SF+++P+YE WKE+   +   W  KYYKGLGTS++++ + YFQ+
Sbjct: 673  IVKVWKGDPKNPTHSKSFFTLPEYEEWKETHAHD-KKWQKKYYKGLGTSSTEDAQIYFQD 731

Query: 650  ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKE 709
            +  H K F    D++ E IELAFSKKK + RK+WL QF+PG +LD   + I YSDF+NKE
Sbjct: 732  LDKHLKQFHTLQDKEAELIELAFSKKKADERKEWLRQFKPGTYLDHSTEQITYSDFINKE 791

Query: 710  LILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQ 769
            LILFSMAD  RSIPS++DGLKPGQRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ 
Sbjct: 792  LILFSMADNIRSIPSVIDGLKPGQRKVLYTMFKRNVRKDIKVVELAGYVSGMTAYQHGDN 851

Query: 770  SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
            SL +TI+G+AQ FVGSNNIN L+P+G FG+R QGG D+ASARYI+TRLSP  R LF   D
Sbjct: 852  SLHTTIVGLAQTFVGSNNINCLEPSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHPAD 911

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
            + LL    +DG+ IEP  Y+P++P +L+NG++GIGTGWS+ IPNYNP D+VAN++RL+ G
Sbjct: 912  EPLLVNNTDDGKVIEPETYVPVVPLILINGADGIGTGWSTSIPNYNPEDVVANLKRLMAG 971

Query: 890  EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREF 949
            E + PM PW+RGF G  E T S   G  Y  +GII++  +  + I ELPIR WTQD+++ 
Sbjct: 972  EELVPMKPWFRGFKG--EVTGS---GDRYKFSGIIKQTGDNEVEITELPIRTWTQDFKDR 1026

Query: 950  LESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
            LE II  D+  SFI+ ++ Y+  T V F + + E+ M +  +EGL +KFKL   I+TSNM
Sbjct: 1027 LEEIIKADKVPSFIKDYKDYNTHTNVHFIIQMDEKHMKKALEEGLEEKFKLIKPIATSNM 1086

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVN 1067
              FD++G I +Y+TPE IL+ F+ +R++ YE+RK+  L  L+ +L KL N+ RF+  +++
Sbjct: 1087 VAFDAEGRITRYETPEDILQAFYAVRIKLYERRKQHLLSQLQSQLDKLSNQARFVQMIID 1146

Query: 1068 GEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID 1127
            G++V++ +K+T L+ EL+ K F PFPK + + ++      +  E+ EE       + S  
Sbjct: 1147 GKLVISKKKKTILIQELKDKAFKPFPKVADTAKSDEVDDEEGEEDEEEEGNSDAVLSSDA 1206

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDE 1183
            YDYLLSM + +LT E+V+ L         EVD L K + E +W KDLD        QL++
Sbjct: 1207 YDYLLSMPLWSLTQERVEKLRRQIGDKEMEVDALIKLSKEDIWRKDLDDFIAEWRFQLED 1266

Query: 1184 LDKSDARAEEERMKIKGNGNG-----DAGPKI-VAKRAPKNARKND-------KKSNNAR 1230
                    E  R KI G G         G ++ VAK+   N+  +        KK+   R
Sbjct: 1267 -------EENRRKKIAGRGRRLSAKVKTGSRVTVAKKRKANSGDDSDFDAPKGKKATVNR 1319

Query: 1231 ATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEP 1290
                 G +D +    KPK +A + K+  +  DD +E EV    + + K   +  +   +P
Sbjct: 1320 VQPKGGLLDYLG---KPKPKAKI-KSNVDGADDSDEFEV----EVMPKPKSRGTTKAAKP 1371

Query: 1291 SPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIAAPEEG 1350
                + + + + + + +  KE SK  A         TS +E   +++DD   E+ +    
Sbjct: 1372 VSVVNDLSDADFMDIDSMGKEKSKPKA---------TSSTEKPTVVNDDSDIEMVSKPTT 1422

Query: 1351 KKGGR 1355
            ++  R
Sbjct: 1423 QRSAR 1427


>gi|242772741|ref|XP_002478098.1| DNA topoisomerase II [Talaromyces stipitatus ATCC 10500]
 gi|218721717|gb|EED21135.1| DNA topoisomerase II [Talaromyces stipitatus ATCC 10500]
          Length = 1678

 Score = 1200 bits (3104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1227 (50%), Positives = 841/1227 (68%), Gaps = 73/1227 (5%)

Query: 22   APNKT-IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            AP +T   + YQK +QLEHI+ RPDTYIGSIEK TQ +W+Y+  +++M  R ++YVPGLY
Sbjct: 122  APTQTGAADKYQKLTQLEHIIKRPDTYIGSIEKTTQQMWVYDSATESMEFREVTYVPGLY 181

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEI+VNAADNKQ D  MD +++ +D+E  +ISV N+G G+P+E+H +E ++VPELIF
Sbjct: 182  KIFDEIVVNAADNKQNDENMDEIRITVDRESGVISVWNNGRGIPIEVHSKEQIFVPELIF 241

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            GHLLTSSNYDD   K TGGRNG+GAKL N+FSTEF IET D ++ KKY+Q +T NM K  
Sbjct: 242  GHLLTSSNYDDGQMKVTGGRNGFGAKLCNVFSTEFTIETCDSRQGKKYQQTWTENMSKMG 301

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
            +  I+  K  D++TKV+FKPD  KF M  ++DD  AL+K+RV DLAG     V V+LNG 
Sbjct: 302  KAKITASKV-DDYTKVTFKPDYKKFGMEGMDDDFEALVKRRVYDLAGTA--KVAVKLNGS 358

Query: 261  RVPVKSFAEYVDMYPKSVT--RFHERVNE-----------RWEICVTLSEGQFQQVSFVN 307
            R+P+++F +Y++MY K++   R  E  N+           RWE+  T+S+G FQQVSFVN
Sbjct: 359  RIPIRNFKKYMEMYTKAIKKERGEEATNDKSEIVTASPDPRWEVGFTVSDGSFQQVSFVN 418

Query: 308  GIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDS 366
             IAT  GGTHV+Y+A+Q+ N +   V KKNK  A +KA  ++NH+++FVNALI NPAF S
Sbjct: 419  SIATTSGGTHVNYIADQICNRLAEAVKKKNKQGATLKASQIRNHIFIFVNALIVNPAFTS 478

Query: 367  QTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV 426
            QTKE LT + S FGSKC L E+F KKV  K+ ++  +L +A  K  + LKK DG +   +
Sbjct: 479  QTKEQLTTKPSQFGSKCILDEDFYKKVL-KTEVMTNILHFAEKKADQILKKTDGGRRSRM 537

Query: 427  RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
                KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+
Sbjct: 538  NN-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRD 596

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIF 546
            AS +Q+  N+EI NIK  +GL+   EY + + LRYGHLMIMTDQ                
Sbjct: 597  ASIDQISKNAEIQNIKSFIGLQHKKEYTDTRGLRYGHLMIMTDQ---------------- 640

Query: 547  AWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---ATNKN-G 602
                        DHDGSHIKGLLINF+   +PSLLKIP FL+EFITPIVK      KN  
Sbjct: 641  ------------DHDGSHIKGLLINFLQVQFPSLLKIPEFLIEFITPIVKVWKGDPKNPT 688

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            K  SF++MP+YE WKE    +  +W  KYYKGLGTST+++ + YF+++  H K+F    D
Sbjct: 689  KSKSFFTMPEYEQWKEEHKYD-RTWQHKYYKGLGTSTTEDAQIYFRDLDRHLKEFHTMQD 747

Query: 663  QDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
             + + I+LAFSKKK + RK+WL Q++PG  LD   K I Y+DF+NKELILFSMAD QRSI
Sbjct: 748  HEAQLIDLAFSKKKADERKEWLRQYKPGTFLDHSTKQITYTDFINKELILFSMADNQRSI 807

Query: 723  PSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDF 782
            PS+VDGLKPGQRK+L+  FKRN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ F
Sbjct: 808  PSVVDGLKPGQRKVLYTCFKRNVKKDMKVVELAGHVSGMTAYQHGDTSLQQTIVGLAQTF 867

Query: 783  VGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQ 842
            VGSNN+N L+P+G FG+R QGG D ASARYI+TRLSP  R +F + D+ LL Y  +DG++
Sbjct: 868  VGSNNLNCLEPSGNFGSRLQGGADCASARYIYTRLSPFARRVFHQADEPLLTYNEDDGEK 927

Query: 843  IEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGF 902
            IEP  Y+P++P +L+NG++GIGTGWSS IPNYNP ++VAN++R+++GE  EPM PW+RGF
Sbjct: 928  IEPELYVPVVPLILINGADGIGTGWSSSIPNYNPEEVVANLKRMMDGEEPEPMQPWFRGF 987

Query: 903  GGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSF 960
             G +    +++    Y  +G+I+EV++  + I ELPIR WTQD+++ LE II  ++  SF
Sbjct: 988  KGEV----TQQGPDRYKFSGLIKEVSDKEVEITELPIRTWTQDFKDKLEDIIKAEKTPSF 1043

Query: 961  IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYD 1020
            I+ ++ Y+  T V F + + E+ +     EGL +KFKL+ TI+TSN+  FD +G I KY 
Sbjct: 1044 IKDYKDYNTHTKVHFVIQMDEKHLKAAVSEGLEEKFKLSRTIATSNLVAFDPEGRITKYA 1103

Query: 1021 TPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDL 1080
            T   IL+EF+ +RL++YE+RK+ QL  L+ EL K  N+ RF+  +++G++V++ +K+  L
Sbjct: 1104 TVSDILKEFYAVRLKYYERRKQHQLSELQKELDKFTNQARFVQMIIDGKLVISKKKKPVL 1163

Query: 1081 LLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVN-GVQSIDYDYLLSMAIGTL 1139
            + EL++KGF PFPK S   EAV AG T++  E +E+ E  N  V S  YDYLL MAI +L
Sbjct: 1164 IAELKEKGFKPFPKVS---EAVKAGETEQVVEEDESSEEANVEVASNAYDYLLGMAIWSL 1220

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEER---M 1196
            T E+V+ LL    +   E+D+L K + E +W +DLD      D +++   + EEE+    
Sbjct: 1221 TQERVEKLLRQIGEKETEIDELIKLSKEDIWRRDLD------DFINEWRFQLEEEQRRER 1274

Query: 1197 KIKGNGNGDAGPKI-VAKRAPKNARKN 1222
            K+ G G   +   +  A + P   RKN
Sbjct: 1275 KVAGMGRRQSSKLMTAASKGPGRKRKN 1301


>gi|224045386|ref|XP_002197470.1| PREDICTED: DNA topoisomerase 2-beta [Taeniopygia guttata]
          Length = 1622

 Score = 1200 bits (3104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1204 (52%), Positives = 826/1204 (68%), Gaps = 72/1204 (5%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T+   ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLY
Sbjct: 45   TSKKMSVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLY 103

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADNKQRD  M  +K+ ID E ++IS+ N+G G+PV  H+ E VYVP LIF
Sbjct: 104  KIFDEILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIF 163

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            G LLTSSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K S
Sbjct: 164  GQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTS 223

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
            EP I K  EGD++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV LNG 
Sbjct: 224  EPKI-KHFEGDDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMLNGK 281

Query: 261  RVPVKSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATI 312
            ++PV  F  YVD+Y K        ++   HE VNERW++C+TLSE  FQQ+SFVN IAT 
Sbjct: 282  KLPVNGFRSYVDLYVKDKLDETGVALKVIHEVVNERWDVCLTLSEKGFQQISFVNSIATT 341

Query: 313  KGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
            KGG HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVFVN LI+NP+FDSQTKE 
Sbjct: 342  KGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNCLIENPSFDSQTKEN 401

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGIS 430
            +TL+  SFGSKC+LSE+F K   +  GI+E++L+W  FK    L KK    K   ++GI 
Sbjct: 402  MTLQPKSFGSKCQLSEKFFK-AASNCGIIESILNWVKFKAQTQLNKKCSSVKHSKIKGIP 460

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KL+DAN AGG++S  CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  
Sbjct: 461  KLDDANDAGGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHK 520

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            Q++ N+EI NI KI+GL+    Y +   +KSLRYG +MIMTDQ                 
Sbjct: 521  QIMENAEINNIIKIVGLQYKKSYEDPESLKSLRYGKIMIMTDQ----------------- 563

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSF 607
                       D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSF
Sbjct: 564  -----------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSF 610

Query: 608  YSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA 667
            YS+P+++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  A
Sbjct: 611  YSIPEFDEWKKHME-NHKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAA 669

Query: 668  IELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSM 715
            I LAFSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS 
Sbjct: 670  ITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSN 729

Query: 716  ADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTI 775
            +D +RSIPS+VDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI
Sbjct: 730  SDNERSIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTI 789

Query: 776  LGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDY 835
            + +AQ+FVGSNN+NLLQP GQFGTR  GGKDAAS RYIFT LSP+ R LFP  DD LL +
Sbjct: 790  VNLAQNFVGSNNVNLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARLLFPSVDDNLLKF 849

Query: 836  LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPM 895
            L +D Q++EP WY+PIIP VLVNG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM
Sbjct: 850  LYDDNQRVEPEWYIPIIPMVLVNGAEGIGTGWACKLPNYDTREIVNNVRRMLDGLDPHPM 909

Query: 896  HPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII 954
             P Y+ F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++
Sbjct: 910  LPNYKNFKGTIQELGQNQ----YVVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPML 965

Query: 955  ---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFD 1011
               ++  + I  +++Y  DTTV F V ++EE + + +  GL K FKL T+++ ++M LFD
Sbjct: 966  NGTEKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSMVLFD 1025

Query: 1012 SKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIV 1071
              G +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I 
Sbjct: 1026 HMGCLKKYETVQDILKEFFDLRLHYYSLRKEWLVGMLGAESTKLNNQARFILEKIQGKIT 1085

Query: 1072 VNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDY 1130
            + NR + DL+  L Q+G+   P  +       A   ++++ + ++    +G  S  D++Y
Sbjct: 1086 IENRSKRDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDSQNANDDASSASGPASGPDFNY 1145

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            +L+M++ +LT EKV+ L+  RD    E++DL++ +P  LW +DL A    ++EL+K +A+
Sbjct: 1146 ILNMSLWSLTKEKVEELIKQRDSKERELNDLKRKSPSDLWKEDLAAF---VEELEKVEAQ 1202

Query: 1191 AEEE 1194
              E+
Sbjct: 1203 ERED 1206


>gi|164663033|ref|XP_001732638.1| hypothetical protein MGL_0413 [Malassezia globosa CBS 7966]
 gi|159106541|gb|EDP45424.1| hypothetical protein MGL_0413 [Malassezia globosa CBS 7966]
          Length = 1376

 Score = 1199 bits (3103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1191 (51%), Positives = 811/1191 (68%), Gaps = 65/1191 (5%)

Query: 9    LTTSNNANVVGPTAPN-----KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEE 63
            +TTS  A V  P AP      K+  + YQK SQLEH+L RPDTYIGS+E+ T+ +W+Y+ 
Sbjct: 1    MTTSTEAGVASP-APTSRPAPKSASDTYQKLSQLEHVLRRPDTYIGSVERRTETMWVYDV 59

Query: 64   ESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGV 123
              + M +R  SYVPG YKIFDEILVNAADNK RDP MD +KV ID++   ISV N+G G+
Sbjct: 60   AKEQMAYRDTSYVPGFYKIFDEILVNAADNKVRDPSMDTMKVTIDKDAGTISVWNNGQGI 119

Query: 124  PVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGK 183
            PVEIH++E VY+PELIFG+LLTSSNYDD+  K TGGRNG+GAKLTNI+STEFI+ETAD +
Sbjct: 120  PVEIHEKEQVYIPELIFGNLLTSSNYDDDEAKVTGGRNGFGAKLTNIYSTEFIVETADKQ 179

Query: 184  RLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVV 243
            R  KYKQVF+N+M  K +P I+K    + +T ++FKPDL+ F+M  +  D  AL+ KRV 
Sbjct: 180  RELKYKQVFSNHMHDKDKPKITKNTRKEEYTCITFKPDLSLFHMDSIHPDTEALLMKRVF 239

Query: 244  DLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQV 303
            D+AG     V     G+ VP           P  V    E     WE+   +S+G  +QV
Sbjct: 240  DMAGT---RVIRPHGGNPVP----------RPTIVYDASEDHGRLWEVGFAVSDGTARQV 286

Query: 304  SFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPA 363
            SFVN IATIKGG HVD+V +Q+   +M  + K  K+A +KA++++  LW+FVN  I NP 
Sbjct: 287  SFVNNIATIKGGKHVDHVESQIVERIMEHLKKGKKDAPIKANHIRQQLWIFVNCQIVNPT 346

Query: 364  FDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKT 423
            FDSQTKETLTL+ S+FGSK  + ++F KKV  KSG+++ + S   + Q + L+  DG K 
Sbjct: 347  FDSQTKETLTLKPSAFGSKWVMPDDFAKKVL-KSGVIDNVQSIVQYHQDRQLQATDGRKR 405

Query: 424  EDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLN 483
              V  ++KLEDAN AG + S +CTLILTEGDSAK LA++GLS VGRD +GVFPLRGKLLN
Sbjct: 406  SRV-SVTKLEDANWAGTKRSAECTLILTEGDSAKGLAVSGLSEVGRDAYGVFPLRGKLLN 464

Query: 484  VREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFI 543
            VREA+ +Q+  N+EI NIK+ILGL+ G  Y+ V  LRYG LMIMTDQ             
Sbjct: 465  VREATYDQIKKNTEIKNIKEILGLQHGKSYSTVDGLRYGSLMIMTDQ------------- 511

Query: 544  LIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK 603
                           D DGSHIKGL+IN++  F+PSLLKIP+FLVEFITPI+KAT K  +
Sbjct: 512  ---------------DFDGSHIKGLIINYLDHFYPSLLKIPNFLVEFITPIIKAT-KGQE 555

Query: 604  VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
            V SF+++P++E WK + G     W+ KYYKGLGTS   E KEYF+++  H   F     +
Sbjct: 556  VRSFFTIPEFEQWKAT-GDGGRGWTTKYYKGLGTSKPYEMKEYFRDMDRHMLSFDTIRPE 614

Query: 664  DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIP 723
            D + ++LAF+KKK + RK+WL QF PG +LD + + I  SDF+NKELILFSMAD  RSIP
Sbjct: 615  DHDLLDLAFNKKKADDRKEWLRQFVPGTYLDHRIRNIPISDFINKELILFSMADNIRSIP 674

Query: 724  SMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFV 783
            S+VDGLKPGQRK++F  FKR    E KV Q  GYVSEHSAYHHG+Q+L  TI+G+AQDF 
Sbjct: 675  SVVDGLKPGQRKVIFSCFKRKLKTEIKVHQLQGYVSEHSAYHHGDQALTMTIVGLAQDFC 734

Query: 784  GSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQI 843
            GSNN+NLL PNGQFG+R+ GGKDAASARYIFT +  ITR +F  DD+ LL+YL +DGQ I
Sbjct: 735  GSNNVNLLMPNGQFGSRSMGGKDAASARYIFTAVPRITRLMFHADDEPLLNYLEDDGQSI 794

Query: 844  EPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFG 903
            EP WY P++P VL+NG+EGIGTGWS+++PNYNPR++V N+RR + GE   PM+PWYRGF 
Sbjct: 795  EPEWYAPVVPQVLLNGAEGIGTGWSTFVPNYNPREVVDNLRRRMAGEEYVPMNPWYRGFV 854

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII---DQNDSF 960
            G IE    +     + VTGI  +++E T  I ELP+R WT  Y+E+LE  +   D+  + 
Sbjct: 855  GGIEPAGPER----FRVTGIARQLDERTWEITELPVRVWTMTYKEWLEERVVGSDKTPAV 910

Query: 961  IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYD 1020
            +R +++Y  DT+V F V L+   M   ++ G    FKL+T +STSNM LF+ +G IKKY 
Sbjct: 911  LREYKEYHTDTSVHFVVELNPRGMEEIERVGPDTFFKLSTMLSTSNMVLFNPEGKIKKYA 970

Query: 1021 TPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDL 1080
            TP++ILE+F+ +RL FY++RK+  ++ L+L   +L N+ RF+  ++  E+ V+N+K+  +
Sbjct: 971  TPQEILEDFYFVRLGFYQRRKEHLVDQLKLVYDRLSNQARFVSMIIARELSVSNKKKAAI 1030

Query: 1081 LLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENP-EVVNGVQSIDYDYLLSMAIGTL 1139
            + ELRQ  F  FPK    +EA     T+E  E +E P E  N   + DYDYLLSMAI +L
Sbjct: 1031 VEELRQLKFQAFPK----VEAKAKSVTEEAVEDQEEPDEPANS--NTDYDYLLSMAIYSL 1084

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            T E+V+ LL +RD    E+  L   +P++LW +DL A   + DE    DAR
Sbjct: 1085 TQERVERLLKERDHTETELKILLGRSPQNLWDEDLTAFLEEWDEKLAEDAR 1135


>gi|46370596|gb|AAS90120.1| DNA topoisomerase type 2 [Tetrahymena thermophila]
          Length = 1662

 Score = 1199 bits (3102), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1200 (50%), Positives = 812/1200 (67%), Gaps = 57/1200 (4%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E  YQKK+QLEHILLRPDTY+GS E   + +W+  ++  +  +R I YVP LYKIFDE
Sbjct: 2    SVETTYQKKTQLEHILLRPDTYVGSNEYQDEQMWVLADDGSSFENRQIKYVPALYKIFDE 61

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADN QRD +M  + V+IDQ+++ IS+ N G G+PV+IH+E  +YVPELIFGHLLT
Sbjct: 62   ILVNAADNYQRDKRMKRLDVIIDQKNNCISILNDGKGIPVQIHKEYNIYVPELIFGHLLT 121

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D  KK  GGRNG+GAKLTNIFST+FI+E+AD K  KK++  +T NM ++SEP IS
Sbjct: 122  SSNYNDEEKKVVGGRNGFGAKLTNIFSTKFIVESADSKNKKKFQMTWTKNMSEQSEPQIS 181

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
               E D +TK++F PDL KF+M  LE D+V LMKKRV D+AG +G SVKV LNG R+ + 
Sbjct: 182  SYTESD-YTKITFYPDLKKFHMKELEKDIVDLMKKRVYDMAGVIGGSVKVSLNGERISIS 240

Query: 266  SFAEYVDMYPKS-------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
            SF++Y D Y K+       V+      N+RWE+  +LSEGQFQQVSFVN I T KGGTHV
Sbjct: 241  SFSDYCDFYLKNQGAEVIKVSDNKGTNNQRWEVIASLSEGQFQQVSFVNSICTSKGGTHV 300

Query: 319  DYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            +Y+ +Q+   +M  + KK K+ N+K   VK+HLW+FVN LI+NP+FD+QTKETLTLRQ S
Sbjct: 301  NYITDQITEKLMETLKKKEKSLNIKQFQVKSHLWIFVNCLIENPSFDTQTKETLTLRQQS 360

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFK-QSKDLKKNDGTKTEDVRGISKLEDANL 437
            FGS CE+SE+F+K++  KS I+  +L  A  K Q+K  K     K   + G+ KLEDAN 
Sbjct: 361  FGSTCEVSEKFIKEL-LKSNIINHILLQARAKEQAKMAKTLSAKKQSRLLGVPKLEDAND 419

Query: 438  AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
            AG RN+E CTLI+TEGDSAKALAM+G+ VVGRD+FGVFPL+GK+LNVR+++S Q+  N E
Sbjct: 420  AGTRNAESCTLIITEGDSAKALAMSGIEVVGRDKFGVFPLKGKMLNVRDSTSKQITENLE 479

Query: 498  IGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLA 557
            I NI K++G+K    Y+NVKSLRYG +MIM DQ                           
Sbjct: 480  IQNIIKVMGMKLNTNYDNVKSLRYGSIMIMADQ--------------------------- 512

Query: 558  QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWK 617
             DHDGSHIKGL INFI +FWPSL ++  FL EFITPIVK   K  + +SF+S+ D++ WK
Sbjct: 513  -DHDGSHIKGLFINFIQNFWPSLFQMDGFLKEFITPIVKV-RKGNQSISFFSIQDFKRWK 570

Query: 618  ESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
             S   N   W IKYYKGLGTST +E +EYF NI  H   F +    D +AI+LAF+KK+ 
Sbjct: 571  -STCPNQHLWKIKYYKGLGTSTDQEAQEYFGNINKHVISFKYNGKDDEDAIDLAFNKKRA 629

Query: 678  EARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKIL 737
            E RKKWL++++P  ++D  +K++ Y DFVNKELI FS +D  RSIPS+ DGLKPGQRKIL
Sbjct: 630  EDRKKWLVKYDPEENVDHSQKHLTYKDFVNKELINFSNSDNARSIPSLCDGLKPGQRKIL 689

Query: 738  FCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQF 797
            F  FKRN   E KVAQ SGYV+EHSAYHHGEQSL STI+GMAQ FVG+NNIN L P GQF
Sbjct: 690  FACFKRNLKNEIKVAQLSGYVAEHSAYHHGEQSLESTIVGMAQSFVGTNNINYLMPIGQF 749

Query: 798  GTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLV 857
            G+RN GGK+AASARYI T L+ ITR +FP+ DD +L YL ++GQQ+EP +Y+PIIPT L+
Sbjct: 750  GSRNMGGKEAASARYIHTCLNKITRCVFPEPDDHILYYLEDEGQQVEPIYYLPIIPTALL 809

Query: 858  NGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVT 917
            NG++GIGTGWS+ IP YNPR++V ++ + + G     + PWY+GF G I    S      
Sbjct: 810  NGADGIGTGWSTSIPCYNPRELVDSIEKRMMGVPFTDLLPWYKGFTGEI----SNNEKSQ 865

Query: 918  YTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN---DSFIRGFRQYSDDTTVD 974
             TV+G    VNETT+ I ELPI++W +DY+ FLE  ++     D  I   ++Y     V 
Sbjct: 866  ITVSGKYHLVNETTIEITELPIKKWIRDYKNFLEEKLESTKDKDPEIEDIKEYHAGNRVH 925

Query: 975  FEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRL 1034
            F V +SE+ M + ++EG+ K FKL +TI T+NM LF+ +G + +Y    +I+EEF+ +RL
Sbjct: 926  FVVKMSEKQMEKVQREGIDKYFKLQSTIPTTNMVLFNHEGKLTRYANICEIMEEFYEVRL 985

Query: 1035 EFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT---- 1090
              Y++RK+  +  +E +L  L NK RFIL V+N  I V N KR DL+ EL  +G+     
Sbjct: 986  NAYKRRKEYLVSKIERDLEILSNKKRFILAVINESIRVRNAKRKDLIKELSVQGYVQMKD 1045

Query: 1091 -PFPKNSKSIEAVVAGATDETEES--EENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGL 1147
             P  K+SK    +      ++ E   E NP   N + + +Y+YLLS+ + +LT EKV+ +
Sbjct: 1046 MPKIKSSKLTSQLEQEQNQDSNEENFETNP---NEINAKEYNYLLSLPMWSLTYEKVEEI 1102

Query: 1148 LADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAG 1207
              ++    +E+D L       +W +DL      LD++++ +     +RMK + N     G
Sbjct: 1103 KQEQKNKQDELDKLVATEVIDIWKEDLKNFIECLDQIEEEEDEEMRKRMKKQSNSKVKQG 1162


>gi|402220357|gb|EJU00429.1| DNA topoisomerase II [Dacryopinax sp. DJM-731 SS1]
          Length = 1365

 Score = 1198 bits (3099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1197 (50%), Positives = 822/1197 (68%), Gaps = 64/1197 (5%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K   E+Y++   +EH+L RPD+YIGS+E+ T  +W+ + E+K M++R+  +VPG +KI D
Sbjct: 108  KNASEIYERLDAVEHVLKRPDSYIGSVERKTDLIWVLDPETKRMVNRSTKFVPGFFKIVD 167

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAAD+K  +  MD +KVVID+E   ISV+N+G G+PVE+H +E +Y+P+LIFG+L 
Sbjct: 168  EILVNAADHKVNEAAMDTLKVVIDREKKSISVYNNGAGIPVEMHTKENMYIPQLIFGNLF 227

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            + SNYDD  KK TGGRNG+GAKL NI+S EF +ETAD K  KKYKQ++ +NM    +P+I
Sbjct: 228  SGSNYDDTEKKLTGGRNGFGAKLANIYSHEFTVETADSKNGKKYKQMWKDNMSICGKPSI 287

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +   + D WTKVSF PDLA+F MT ++DD  AL+ KRV DLAG + K VKV LN  R+ +
Sbjct: 288  TNYSKSDGWTKVSFTPDLARFGMTEIDDDTYALLCKRVYDLAGTI-KDVKVFLNDERLRI 346

Query: 265  KSFAEYVDMYPKSV---------------TRFHERVNERWEICVTLSEGQFQQVSFVNGI 309
            K+F +Y+D+Y  SV               T  +E++N RWE+   +S+GQFQQVSF N I
Sbjct: 347  KNFKQYIDLYLNSVAEANVESGATAQPKQTVVYEQLNPRWEVGFVVSDGQFQQVSFANSI 406

Query: 310  ATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTK 369
            +TIKGGTHV+ +A+Q++N ++  + KKNK+A VK   ++NH+W+FVN L++N AFDSQTK
Sbjct: 407  STIKGGTHVETIASQISNKLLTAIQKKNKSAPVKPFQIRNHMWLFVNCLVENAAFDSQTK 466

Query: 370  ETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGI 429
            +TLTL+ +SFGS+  +++EF+KKV AKSGIVE +L +A FK  +  KK DGTK   + G+
Sbjct: 467  DTLTLKSTSFGSRPTITDEFMKKV-AKSGIVENVLEYAKFKADQAHKKTDGTKRSRLVGM 525

Query: 430  SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS 489
            +KL DAN AGGRN+ +C+LIL EGDSAK LA AGL+VVGRD FG+FPLRGKLLNVREA+ 
Sbjct: 526  AKLVDANNAGGRNASKCSLILCEGDSAKTLAEAGLAVVGRDNFGIFPLRGKLLNVREANH 585

Query: 490  NQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
             Q++ N+EI  IKKI+GL+    Y++V SLRYG +MIMTDQ                   
Sbjct: 586  EQIMKNAEIQAIKKIMGLQHNKVYDSVDSLRYGSIMIMTDQ------------------- 626

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG-KVLSFY 608
                     D DGSHIKGL+INF+  F+PSLLKIP FLVEFITPIV+ T+K   K  +F+
Sbjct: 627  ---------DFDGSHIKGLIINFLDHFYPSLLKIPGFLVEFITPIVRVTHKRTRKRTTFF 677

Query: 609  SMPDYEAWKESLGGNASSW-SIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA 667
            +MP+YE W E    +   +   KY+KGLGTS  ++G EYF N+  H   F    + + E 
Sbjct: 678  TMPEYEEWAEQHKHDKHLYEDPKYFKGLGTSGPEDGMEYFGNMETHLIPFHPTQEGEREL 737

Query: 668  IELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVD 727
            I++AFSKKK+EARK WL  F+PG ++D     I Y DF+NKELILFSMAD  RSIPSM D
Sbjct: 738  IDMAFSKKKVEARKDWLRNFKPGTYMDHSVDEITYDDFINKELILFSMADNIRSIPSMCD 797

Query: 728  GLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNN 787
            GLKPG RK+LF  FKRN   E KVAQ +GY+ EH+AYHHGEQSL STI+GMAQ+FVG+NN
Sbjct: 798  GLKPGHRKVLFGVFKRNLKNEIKVAQLAGYIGEHTAYHHGEQSLHSTIIGMAQNFVGANN 857

Query: 788  INLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
            +NLL P+G FG+R+ GG+DAA+ARY+ T L  ITR +F   DD +L YL EDG++IEP +
Sbjct: 858  LNLLIPSGGFGSRSMGGEDAAAARYLNTNLMAITRSVFHSADDNILTYLMEDGKRIEPEF 917

Query: 848  YMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIE 907
            Y+PIIP VLVNGS GIGTGWS+ IP++NP DIVAN+RR +  E +EPM PWYR F G+ E
Sbjct: 918  YLPIIPMVLVNGSSGIGTGWSTNIPSFNPVDIVANIRRYMRHEPLEPMSPWYRNFLGSFE 977

Query: 908  KTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII---DQNDSFIRGF 964
            K +  +    +   GII++V++  + I ELPI RWTQ Y+E LES I   D+  + I+ +
Sbjct: 978  KVSEGK----FVCHGIIKKVDDYNVEITELPIGRWTQKYKEMLESWIMGDDKTAATIKDY 1033

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
            ++Y     + F V LS   M + + EGL K FKL   IST+NM  FD+ G ++K+++PE 
Sbjct: 1034 KEYHTTRHIRFTVQLSGTEMQKAEAEGLEKYFKLLEAISTTNMMCFDADGKMRKFNSPED 1093

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            ++E+F  +RL+FY+KRK    + L +EL KL N+ RF+  +++ E+V++NRK+ D++ EL
Sbjct: 1094 LIEDFCPLRLKFYQKRKDYLADQLMVELEKLNNQARFVKMIIDRELVISNRKKVDIVAEL 1153

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            R+K   PFPK SK+ E        E    EE P  V      D+DYLL MAI +LT E++
Sbjct: 1154 RKKELKPFPKVSKAKEE----GETEDVVEEEEPGSVT-----DFDYLLGMAIYSLTQERI 1204

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSD-ARAEEERMKIKG 1200
              LL D ++   E+  L K +P+ +W  DLD    + + L + D A    E  K KG
Sbjct: 1205 NRLLLDCERKEGELKALLKQSPQDIWNNDLDVFLEKWENLLEDDVAMQNNENRKKKG 1261


>gi|393247852|gb|EJD55359.1| type II DNA topoisomerase [Auricularia delicata TFB-10046 SS5]
          Length = 1538

 Score = 1198 bits (3099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1281 (49%), Positives = 860/1281 (67%), Gaps = 78/1281 (6%)

Query: 15   ANVVGPTAP--NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRT 72
            A  V   AP  +KT  E YQK + +EHIL RPD+YIGS+E+  Q +W ++ ++K M+HR 
Sbjct: 89   AKPVEAAAPRKDKTASETYQKFTPIEHILKRPDSYIGSVERIKQTMWTFDSDTKRMVHRA 148

Query: 73   ISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEG 132
            +SYVPG YKI DEILVNAADNK  DP MD +K+ ID E++ ISV N+G G+P+EIH  E 
Sbjct: 149  VSYVPGFYKIVDEILVNAADNKINDPNMDTLKINIDPENNTISVWNNGHGIPIEIHSTEK 208

Query: 133  VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVF 192
            +Y+PE+IFG+LLTSSNYDDN KK TGGRNGYGAKLTNI+S  F +ETAD K  +KYKQ +
Sbjct: 209  MYIPEMIFGNLLTSSNYDDNEKKLTGGRNGYGAKLTNIYSHRFTVETADKKTAQKYKQTW 268

Query: 193  TNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKS 252
             +NM    +P I+K  + + +T VSF+PDLA+F M  L+DD+V+L+KKRV D+AG + K 
Sbjct: 269  KDNMSVCEKPKITKNGKKEEFTCVSFEPDLARFGMDSLDDDIVSLLKKRVYDMAGTV-KD 327

Query: 253  VKVELNGHRVPVKSFAEYVDMYPKSVTR----------------FHERVNERWEICVTLS 296
            +KV LN  R+ +K+F +YV+MY +S                    +E+ NERWE+   +S
Sbjct: 328  IKVYLNDERLKIKNFKQYVEMYLESAAAAASEESGGAAQTKPAFVYEQPNERWEVAFAVS 387

Query: 297  EGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVN 356
            +G  Q VSF N IAT KGGTHV YVA+Q+A  ++A V KKNK A VKA  +KNH+W+FVN
Sbjct: 388  DGTPQHVSFANSIATTKGGTHVAYVADQIAKKLVAAVEKKNKGATVKASQMKNHMWIFVN 447

Query: 357  ALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK 416
            ALI+NP FDSQTKE LTL  S FG++  LS++F+KK+ AKS ++E +LSWA FK  KD K
Sbjct: 448  ALIENPTFDSQTKEQLTLPASKFGTRPSLSDDFMKKI-AKSSLIENVLSWAKFKADKDAK 506

Query: 417  KNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFP 476
            K DGTK   + G+ KL DAN AGGR  + CTLILTEGDSAK LA+AGL VVG D FGVFP
Sbjct: 507  KTDGTKRTRLTGMVKLTDANRAGGRYGKDCTLILTEGDSAKGLALAGLDVVGHDNFGVFP 566

Query: 477  LRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPL 536
            LRGK+LNVREA  +Q++ N EI  IKKI+GL+   +Y +V+SLRYG LMIM DQ      
Sbjct: 567  LRGKMLNVREAKHDQIMKNEEIQAIKKIIGLQHNKQYTSVESLRYGKLMIMADQ------ 620

Query: 537  SFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK 596
                                  DHDGSHIKGLLINF+  F+PSLLK+P FLVEF+TPIV+
Sbjct: 621  ----------------------DHDGSHIKGLLINFLDHFYPSLLKLPEFLVEFVTPIVR 658

Query: 597  ATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKD 656
                N +  +F+++ ++ AW+E+   ++  W++KYYKGLGTS  ++G++YF ++  H   
Sbjct: 659  VIKGN-RHHNFFTLYEFRAWQEATA-DSHRWTVKYYKGLGTSKPEDGRDYFGHMEKHVIP 716

Query: 657  FVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMA 716
            F   DD+  +A++LAFSKK+ + RK WL Q +P   LD  ++ I  +DF+NKELILFS A
Sbjct: 717  FAPCDDEGKQAVDLAFSKKRADERKDWLRQLQPDTFLDHSQRQISLTDFINKELILFSQA 776

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D  RSIPS +DGLKPGQRK+++  FKR    E KVAQ  GY+SEH+AYHHGE SL  TI+
Sbjct: 777  DNIRSIPSGIDGLKPGQRKVIWSCFKRKLRGEIKVAQLVGYISEHAAYHHGEASLGMTIV 836

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQDFVGSNN+NLL PNG FG+R  GGKDAA+ RYIFT LSPITR +F   D+ LL YL
Sbjct: 837  NLAQDFVGSNNVNLLLPNGIFGSREMGGKDAAAFRYIFTELSPITRTIFHPSDEGLLKYL 896

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             ED   +EP WY+P++P VL+NG+EGIGTGWS+ IP YNP DIV N+R L+ GE M+PM 
Sbjct: 897  QEDNDIVEPEWYVPVVPVVLLNGAEGIGTGWSTSIPCYNPVDIVTNIRHLMRGEEMDPMM 956

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID- 955
            PW+RG+ GTI K A ++    + VTGI+ + + TT+ I EL + +WTQ Y+  LE++++ 
Sbjct: 957  PWWRGYKGTIRKIADQK----FEVTGIVTKTSATTVEITELAVGKWTQAYKAELEAMMEN 1012

Query: 956  --QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
              +++  I+ + ++    TV+F V LSE+ M + +++GL + FKLTT I+TSNM  FD  
Sbjct: 1013 EKESEPKIKDYTEHHTFVTVNFHVTLSEKDMAKAEEKGLAEYFKLTTKINTSNMICFDKD 1072

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G IKKY+T E+I+E+F+ +RL FY+KRK     +L+ E+ +L N+ RF+  +V  ++ V+
Sbjct: 1073 GKIKKYNTAEEIIEDFYPLRLSFYQKRKDHLAADLQKEVDRLNNQARFVQMIVERKLSVS 1132

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDET-EESEENPEVVNGVQSIDYDYLL 1132
            NRK+ D++ ELR+  FTPFPK S    A  AG T  T ++ +E  +V +G+   DYDYLL
Sbjct: 1133 NRKKADIVAELRKLDFTPFPKKS---SAKSAGETAPTVDDPDEEEDVGSGMG--DYDYLL 1187

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1192
             MAI +LT EK++ L        EE+ +L   TP  +W  DLD   ++ D++ +    AE
Sbjct: 1188 GMAIWSLTKEKIEKLRQQALGKEEELKELLSKTPAQMWDHDLDQFLLEWDKI-RDSWTAE 1246

Query: 1193 EERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGR-- 1250
            E +   K    G    ++   +  K A  + +  ++ R T+A        +  +PK R  
Sbjct: 1247 ERKAAAKKGKQGKLKTRLSIGKPKKGAGSDSE--DDFRPTKA------TARKAEPKARVT 1298

Query: 1251 -AGLKKAPAEK---LDDDEED 1267
             A   KA  +K   L DDE D
Sbjct: 1299 SASSSKATVKKVTALLDDESD 1319


>gi|380798189|gb|AFE70970.1| DNA topoisomerase 2-beta, partial [Macaca mulatta]
          Length = 1594

 Score = 1195 bits (3092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1199 (52%), Positives = 819/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 18   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 76

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 77   ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 136

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 137  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 195

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 196  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 254

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 255  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 314

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 315  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 374

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 375  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 433

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 434  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 493

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 494  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 531

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 532  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 583

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 584  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 642

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 643  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 702

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 703  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 762

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 763  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 822

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 823  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 882

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 883  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 938

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 939  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 998

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 999  KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1058

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M+
Sbjct: 1059 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNMS 1118

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1119 LWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1174


>gi|388454810|ref|NP_001252630.1| DNA topoisomerase 2-beta [Macaca mulatta]
 gi|387273325|gb|AFJ70157.1| DNA topoisomerase 2-beta [Macaca mulatta]
          Length = 1621

 Score = 1195 bits (3092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1199 (52%), Positives = 819/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 45   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 103

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 104  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 163

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 164  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 222

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 223  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 281

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 282  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 341

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 342  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 401

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 402  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 460

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 461  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 520

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 521  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 558

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 559  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 610

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 611  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 669

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 670  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 729

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 730  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 789

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 790  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 849

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 850  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 909

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 910  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 965

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 966  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1025

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1026 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1085

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M+
Sbjct: 1086 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNMS 1145

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1146 LWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1201


>gi|334322751|ref|XP_001369978.2| PREDICTED: DNA topoisomerase 2-alpha [Monodelphis domestica]
          Length = 1668

 Score = 1195 bits (3092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1205 (51%), Positives = 822/1205 (68%), Gaps = 78/1205 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+EE   + +R +++VPGLYKIFDE
Sbjct: 141  SVERIYQKKTQLEHILLRPDTYIGSVEVVTQQMWVYDEEV-GLNYRDVTFVPGLYKIFDE 199

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM+ +KV ID E++ IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 200  ILVNAADNKQRDPKMNCIKVTIDSENNTISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 259

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMGK  E  + 
Sbjct: 260  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKKMFKQTWMDNMGKAGEMTL- 318

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF MT L+ D+VALM +R  D+AG   K VKV LNG+R+PVK
Sbjct: 319  KPFSGEDYTCITFQPDLSKFKMTSLDKDMVALMSRRAYDIAGST-KDVKVFLNGNRLPVK 377

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K         +   HE VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 378  GFRSYVDLYVKDKLDETGNPLKIIHEEVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 437

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+ + ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 438  VDYVADQIISRLIDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 497

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             +FGSKCELSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 498  KNFGSKCELSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 556

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG +NS  CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 557  NDAGSKNSTDCTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 616

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++KSLRYG +MIMTDQ                      
Sbjct: 617  AEINNIIKIVGLQYKKNYEDADSLKSLRYGKIMIMTDQ---------------------- 654

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVK + +N + +SFYS+P+
Sbjct: 655  ------DQDGSHIKGLLINFIHHNWPSLLK-HCFLEEFITPIVKVS-RNKQEMSFYSLPE 706

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK +   N   W +KYYKGLGTSTSKE KEYF +++ H+  F +   +D  AI LAF
Sbjct: 707  FEEWKNTTE-NHKKWKVKYYKGLGTSTSKEAKEYFSDMSRHRIQFKYSGPEDDAAISLAF 765

Query: 673  SKKKIEARKKWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  K  K++ Y+DF+NKELILFS +D +R
Sbjct: 766  SKKQIDDRKEWLTHFMEDRRQRKLLGLPEDYLYGKATKHLTYNDFINKELILFSNSDNER 825

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 826  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 885

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD+ L +L +D 
Sbjct: 886  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPAKDDQTLKFLYDDN 945

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRL++GE   PM P Y+
Sbjct: 946  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLMDGEEPLPMLPSYK 1005

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++ A  +    Y ++G +  +N TT+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 1006 NFKGTIDELAPNQ----YVISGEVSIINSTTIEISELPVRTWTQVYKEQVLEPMLNGTDK 1061

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE + + +  GL K FKL T ++ ++M LFD  G +
Sbjct: 1062 TPPLITDYREYHTDTTVKFIVKMTEEKLAQAEHAGLHKVFKLQTNLTCNSMVLFDHVGCL 1121

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+     L  E  KL N+ RFIL  + G+IV+ N+ 
Sbjct: 1122 KKYDTALDILRDFFDLRLKYYGLRKEWLTGMLGAESAKLNNQARFILEKIEGKIVIENKP 1181

Query: 1077 RTDLLLELRQKGFTPFP--------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDY 1128
            + +L+  L Q+G+   P        + S          +D  +E+E++    +   +  +
Sbjct: 1182 KKELIKVLIQRGYDSDPVKAWKEAQQKSPGDNEEETEESDNEKETEKSDSATDSGPT--F 1239

Query: 1129 DYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSD 1188
            +YLL M +  LT EK   L   R +  +E+++L++ +P  LW +DL A   +L+ ++  +
Sbjct: 1240 NYLLDMPLWYLTKEKKDELCRQRTEKEQELENLKRKSPSDLWKEDLAAFVEELEVVEAKE 1299

Query: 1189 ARAEE 1193
             R E+
Sbjct: 1300 KRDEQ 1304


>gi|355747103|gb|EHH51717.1| hypothetical protein EGM_11149, partial [Macaca fascicularis]
          Length = 1603

 Score = 1195 bits (3091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1199 (52%), Positives = 819/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 27   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 85

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 86   ILVNAADNKQRDKNMTCIKVSIDPEANIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 145

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 146  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 204

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 205  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 263

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 264  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 323

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 324  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 383

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 384  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 442

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 443  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 502

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 503  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 540

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 541  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 592

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 593  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 651

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 652  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 711

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 712  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 771

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 772  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 831

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 832  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 891

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 892  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 947

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 948  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1007

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1008 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1067

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M+
Sbjct: 1068 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNMS 1127

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1128 LWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1183


>gi|348562672|ref|XP_003467133.1| PREDICTED: DNA topoisomerase 2-alpha-like [Cavia porcellus]
          Length = 1561

 Score = 1195 bits (3091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1202 (52%), Positives = 821/1202 (68%), Gaps = 75/1202 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R I++VPGLYKIFDE
Sbjct: 29   SIERIYQKKTQLEHILLRPDTYIGSVELLTQQMWVYDEDI-GINYREITFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LISV N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISVWNNGKGIPVVEHKVEKVYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ +K TGGRNGYGAKL NIFST F +ETA     K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDERKVTGGRNGYGAKLCNIFSTRFTVETASKDYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PV 
Sbjct: 207  KPFSGEDYTCITFQPDLSKFKMERLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVT 265

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +   HE+VN+RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKLDETGNPLKVIHEQVNQRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   +M VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLMDVVKKKNKGGIAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQV 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNKIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG RNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGTRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKMLNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYADEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + L+FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLQ-HRFLEEFITPIVKVS-KNKQELAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKKHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L++L +D 
Sbjct: 774  NFVGSNNVNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPKDDHTLNFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VLVNG+EGIGTGWS  IPN++ R+IV N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLVNGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ AS +    Y + G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIEELASNQ----YVINGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYREYHTDTTVKFIVKMTEEKLSEVERAGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID----YDYLL 1132
            + +L+  L Q+G+   P  +           +E EES+   E   G  + D    ++YLL
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPEEEENEESDSEKEAAKGDPAADSGPTFNYLL 1129

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1192
             M +  LT EK   L   RD+  +E+D L+K +P  LW +DL A    ++EL+  +A+ +
Sbjct: 1130 DMPLWYLTKEKKDELCRQRDEKEQELDTLKKKSPSDLWREDLAAF---IEELEVVEAKEK 1186

Query: 1193 EE 1194
            ++
Sbjct: 1187 QD 1188


>gi|390342282|ref|XP_783546.2| PREDICTED: DNA topoisomerase 2-beta [Strongylocentrotus purpuratus]
          Length = 1673

 Score = 1194 bits (3090), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1267 (50%), Positives = 838/1267 (66%), Gaps = 85/1267 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKKSQLEHIL+RPDTYIGS E  T+ +W+ ++    M++R ++YVPGLYKIFDE
Sbjct: 60   SVERIYQKKSQLEHILIRPDTYIGSTEPFTETMWVVDD--GVMVNREVTYVPGLYKIFDE 117

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDP M+ +K+ +D+E +LIS+ N+G G+PV  H+ E ++VPE+IFGHLLT
Sbjct: 118  ILVNAADNKQRDPTMNCIKITLDKEQNLISIWNNGKGIPVVEHKGEKMFVPEMIFGHLLT 177

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKL NIFST+F + TA  +  KK+KQ + NNM K + P I+
Sbjct: 178  SSNYNDDEKKVTGGRNGYGAKLCNIFSTKFTVVTACKEYKKKFKQSWHNNMSKTTSPKIT 237

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
               EG ++T+V+F PDL+KF MT L+ D +AL+ +R  DLAG   K VKV LNG R+PV 
Sbjct: 238  PF-EGTDFTEVTFNPDLSKFKMTELDADTMALLTRRAYDLAGG-SKGVKVFLNGKRLPVN 295

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K         +   HE+VN RWE+CV LSE  FQQVSFVN IAT KGG H
Sbjct: 296  GFKSYVDLYIKDKVDETGNRLKLVHEQVNPRWEVCVCLSEKGFQQVSFVNSIATTKGGRH 355

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV++Q+ N ++  V KKNK   N+K   V++H+WVFVN  I+NP FDSQTKE +TL+ 
Sbjct: 356  VDYVSDQIVNQIIQTVKKKNKAGINIKPFQVRSHIWVFVNCAIENPTFDSQTKENMTLQI 415

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFK-QSKDLKKNDGTKTEDVRGISKLEDA 435
              FGS C+LSE+F+K   A  GIVE +LSW  FK QS+  KK   +K   ++G+ KL+DA
Sbjct: 416  KKFGSTCKLSEKFVK-AAANCGIVENILSWMKFKAQSQLDKKCHTSKHSKIKGVPKLDDA 474

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG+NS  CTLILTEGDSAK+LA++GL VVGRD +GVFPLRGKLLNVREAS  Q++ N
Sbjct: 475  NSAGGKNSSVCTLILTEGDSAKSLAVSGLGVVGRDHYGVFPLRGKLLNVREASHKQIMEN 534

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KILGL+   +Y++   +KSLRYG LMIMTDQ                      
Sbjct: 535  AEINNIIKILGLQYKNKYDSPESLKSLRYGRLMIMTDQ---------------------- 572

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIHS WP LL+  +FL EFITPIVKA+  N   L FYS+P+
Sbjct: 573  ------DQDGSHIKGLLINFIHSNWPHLLQ-RNFLEEFITPIVKASKANETTLPFYSLPE 625

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK++   N  +W +KYYKGLGTST KE KEYF ++  H+  F +    D  AI LAF
Sbjct: 626  FEKWKDATD-NWKTWKVKYYKGLGTSTMKEAKEYFTDMERHRIPFEYTGPDDDAAIVLAF 684

Query: 673  SKKKIEARKKWLLQF--------EPG---NHLDQKE-KYIKYSDFVNKELILFSMADLQR 720
            SKKK+E RK WL ++        E G    +L QK+ K + Y++F+NKEL+LFS AD +R
Sbjct: 685  SKKKVEDRKVWLSEWLEERRSRKETGLGERYLYQKDTKKVSYNEFINKELVLFSNADNER 744

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FK+   KE KVAQ +G VSE SAYHHGEQSL STI+ +AQ
Sbjct: 745  SIPSMVDGLKPGQRKVLFTCFKKYEKKEIKVAQMAGAVSELSAYHHGEQSLMSTIINLAQ 804

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKDAASARYIFT+LSP+ R +FP  DD LL Y+ +D 
Sbjct: 805  NFVGSNNLNLLQPIGQFGTRLHGGKDAASARYIFTQLSPLARLVFPHHDDPLLSYMYDDN 864

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q+IEP +Y PIIP VL+NGSEGIGTGWS+ I NY+ R++VANVRRLL G+   PM P Y+
Sbjct: 865  QRIEPEFYAPIIPMVLINGSEGIGTGWSTRICNYDIREVVANVRRLLAGDEPVPMLPSYK 924

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQNDS 959
             F GTIE+         + V G I  V++ ++ I ELPIR WTQ+Y+E  LE+++   D 
Sbjct: 925  NFKGTIEEFEPNR----FAVNGEISVVDDNSVEITELPIRVWTQNYKESVLENMVYGTDK 980

Query: 960  F---IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN-MHLFDSKGV 1015
                I  +++Y  DTTV F V ++E+ ++R ++EGL K FKL TT S +N M L+D  G 
Sbjct: 981  VKPSISDYKEYHTDTTVKFVVKMNEDRLLRGEEEGLHKMFKLQTTFSQANLMVLYDRHGC 1040

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            I++YD  E+IL EFF +R+E Y KRK      LE E  KL N+ RFI+  ++G++V+ N+
Sbjct: 1041 IRRYDNVEEILREFFTLRMELYHKRKAYLEGILEAESSKLNNQARFIMEKIDGKVVIENK 1100

Query: 1076 KRTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYD 1129
             ++ ++ +L  +G+   P         KS+E       D   +S E           DY+
Sbjct: 1101 SKSSMISQLTSRGYDSDPVKAWKEAQQKSVEEEEDSFDDAASDSSE------AGSGPDYN 1154

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            YLL M++ +LT EK   LL  RD+   E+  LR+ T   LW  DL+A   +LD ++  + 
Sbjct: 1155 YLLGMSLWSLTKEKKNDLLKQRDEKAAELSLLRRKTASMLWTDDLNAFMAELDRVEAQER 1214

Query: 1190 RAEEERMK-IKGNGNGDAGPKIVAKRAPK-NARKNDKKSNNARATEAMGEMDNVTKVVKP 1247
              E   +  +        G KI   R  K   R+  K S   R       +DN+ K    
Sbjct: 1215 EDESSGLTGVSSKMTKGKGSKITKPRKQKLLTREETKPSPYGR--RVAPRIDNLIKKATG 1272

Query: 1248 KGRAGLK 1254
             G+ G K
Sbjct: 1273 DGKRGRK 1279


>gi|395540283|ref|XP_003772086.1| PREDICTED: DNA topoisomerase 2-beta [Sarcophilus harrisii]
          Length = 1601

 Score = 1194 bits (3089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1201 (52%), Positives = 822/1201 (68%), Gaps = 72/1201 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ++W+Y+EE   M  R +++VPGLYKIFDE
Sbjct: 30   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQSMWVYDEEV-GMNCREVTFVPGLYKIFDE 88

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +K+ ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 89   ILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 148

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SEP + 
Sbjct: 149  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWVNNMMKTSEPKV- 207

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +GD++T ++F+PDLAKF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 208  KYFDGDDYTCITFQPDLAKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 266

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 267  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 326

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +Q+   ++ VV KKNK   +VK   VKNH+WVFVN LI+NP FDSQTKE +TL+ 
Sbjct: 327  VDYVVDQIVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNCLIENPTFDSQTKENMTLQP 386

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GI+E++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 387  KSFGSKCQLSEKFFK-AASNCGIIESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 445

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 446  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 505

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y +   +K+LRYG +MIMTDQ                      
Sbjct: 506  AEINNIIKIVGLQYKKSYEDAESLKTLRYGKIMIMTDQ---------------------- 543

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 544  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 595

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 596  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 654

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 655  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 714

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 715  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 774

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS ++R LFP  DD LL +L +D 
Sbjct: 775  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLSRLLFPSVDDNLLKFLYDDN 834

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WYMPIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 835  QRVEPEWYMPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 894

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 895  NFKGTIQEIGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 950

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE +++ +  GL K FKL TT++ ++M LFD  G +
Sbjct: 951  TPALISDYKEYHTDTTVKFVVKMTEEKLVQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1010

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1011 KKYETVQDILKEFFDLRLNYYSLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1070

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI-DYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S  D++Y+L+M+
Sbjct: 1071 KRDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQRDDSSSDSGTTSGPDFNYILNMS 1130

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEER 1195
            +  LT EKV+ L+  RD    E++DL++ +P  LW +DL A    ++ELDK +A+  E+ 
Sbjct: 1131 LWCLTKEKVEELIKQRDAKGRELNDLKRKSPSDLWKEDLAAF---VEELDKVEAQEREDA 1187

Query: 1196 M 1196
            +
Sbjct: 1188 L 1188


>gi|345327921|ref|XP_001507216.2| PREDICTED: DNA topoisomerase 2-beta-like [Ornithorhynchus anatinus]
          Length = 1915

 Score = 1194 bits (3089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1199 (52%), Positives = 817/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 345  SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 403

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +K+ ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 404  ILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 463

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SEP I 
Sbjct: 464  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWVNNMMKTSEPKI- 522

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  EG+++T ++F+PDLAKF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 523  KHFEGEDYTCITFQPDLAKFKMDKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 581

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 582  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 641

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +Q+   ++ VV KKNK   +VK   VKNH+WVFVN LI+NP FDSQTKE +TL+ 
Sbjct: 642  VDYVVDQIVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNCLIENPTFDSQTKENMTLQP 701

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 702  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 760

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 761  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 820

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y +   +K+LRYG +MIMTDQ                      
Sbjct: 821  AEINNIIKIVGLQYKKSYEDAESLKTLRYGKIMIMTDQ---------------------- 858

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 859  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 910

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 911  FDEWKKHME-NHKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 969

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 970  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 1029

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF   KRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 1030 SIPSLVDGFKPGQRKVLFTCCKRNDRREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 1089

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 1090 NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDDN 1149

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 1150 QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 1209

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 1210 NFRGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 1265

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 1266 TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1325

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1326 KKYETVQDILKEFFDLRLNYYSLRKEWLMGMLGAESTKLNNQARFILEKIQGKITIENRS 1385

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   DET+   ++    +G  +  D++Y+L+M+
Sbjct: 1386 KRDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTTTGPDFNYILNMS 1445

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            +  LT EKV+ L+  RD    E++DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1446 LWCLTKEKVEELIKQRDAKGRELNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1501


>gi|344286028|ref|XP_003414761.1| PREDICTED: DNA topoisomerase 2-alpha [Loxodonta africana]
          Length = 1532

 Score = 1194 bits (3088), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1204 (51%), Positives = 826/1204 (68%), Gaps = 79/1204 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDI-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  KK+KQ + +NMGK  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKKFKQTWMDNMGKAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+ +PVK
Sbjct: 207  KPFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNTLPVK 265

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +   +E+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKVDETGNPLKVIYEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQV 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K  T   GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAATG-CGIVESILNWVKFKAQIQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS  CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGGRNSTDCTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKSYDDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEIAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQATTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPKDDHTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ AS +    Y ++G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIEELASNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERAGLHKVFKLHTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  E      +D  +E+E++  V +   +  ++Y
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPEEEENEDSDNEKETEKSDSVTDSGPT--FNY 1127

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R++  +E++ L+K +P  LW +DL A    ++EL+  +A+
Sbjct: 1128 LLDMPLWYLTKEKKDELCKLRNEKEQELETLKKKSPSDLWKEDLAAF---IEELETVEAK 1184

Query: 1191 AEEE 1194
             +++
Sbjct: 1185 EKQD 1188


>gi|429965699|gb|ELA47696.1| hypothetical protein VCUG_00778 [Vavraia culicis 'floridensis']
          Length = 1224

 Score = 1193 bits (3087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1262 (50%), Positives = 827/1262 (65%), Gaps = 112/1262 (8%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIE++YQKK+ +EHILLRP+TYIGS++ HTQ +++ E  +  ++ ++I+YVPGLYKIFD
Sbjct: 4    KTIEQLYQKKTPIEHILLRPETYIGSVDHHTQPMYVLE--NGKIVSKSITYVPGLYKIFD 61

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP M   K+ +D   D ISV N+G GVP+++H++E VYVPELIFG LL
Sbjct: 62   EILVNAADNKIRDPSMS--KLCVDVVDDRISVWNNGKGVPIQMHKKEKVYVPELIFGQLL 119

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD  KK TGGRNGYGAKL NIFS+EFIIETAD K    Y Q +T+NM K+ EP I
Sbjct: 120  TSSNYDDKEKKVTGGRNGYGAKLCNIFSSEFIIETADSKENMTYYQRYTDNMSKREEPVI 179

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +K +  +++TK++F PDL +F M HL++D+V+L+KKRV D+   + K VKV LNG ++P+
Sbjct: 180  TKQRVRESFTKITFVPDLKRFKMEHLDEDIVSLLKKRVYDMCATI-KKVKVFLNGEQIPI 238

Query: 265  KSFAEYVDMY-PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
             SF +YV +Y    V   HE VNERWE+ V LS+ QFQQVSFVN I TIKGGTHV++V +
Sbjct: 239  VSFKQYVSLYLADDVKVVHEVVNERWEVAVVLSDEQFQQVSFVNSICTIKGGTHVNHVLD 298

Query: 324  QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
            Q+ + V+  V KK+K+  +K   V+N ++VFVNALI+N AFDSQTKETLTLR SSFGS+C
Sbjct: 299  QLVDPVIERVQKKDKSLVIKPFFVRNSVFVFVNALIENAAFDSQTKETLTLRVSSFGSRC 358

Query: 384  ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
             LS++F+K+  A   + + +LS A  K SK LKK DG+K+  + G+ KL DANLAG +NS
Sbjct: 359  TLSDDFVKQTVAI--LSDRVLSQALAKMSKQLKKTDGSKSSKITGVEKLSDANLAGTKNS 416

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
             +C+LILTEGDSAK LA++GLSVVGRD +GVFPLRGKLLNVREA+  Q++ N E+ N+KK
Sbjct: 417  HKCSLILTEGDSAKTLAISGLSVVGRDHYGVFPLRGKLLNVREANHKQIMENEELNNLKK 476

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            IL L+   EY + +SLRYGH++IMTDQ                            DHDGS
Sbjct: 477  ILALQHHKEYTSTESLRYGHVIIMTDQ----------------------------DHDGS 508

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN---------------------- 601
            HIKGL+INF   F+PSLL+I  FL EFITPIV+ T K                       
Sbjct: 509  HIKGLIINFFDHFFPSLLRIEGFLKEFITPIVRVTKKKRSRTQNDNPEDDSDVQEVPRNS 568

Query: 602  -------GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHK 654
                   G V+ F+++P+YE WK S   +  +WS+KYYKGLGTSTSK+ K+YF N+  H 
Sbjct: 569  TRTDHSVGTVIDFFTIPEYEDWKNS-TPDVKNWSVKYYKGLGTSTSKDAKQYFSNLDKHI 627

Query: 655  KDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFS 714
            K F     +D   I+LAF+KKK + RK WL    PG  LD     I   DF+NKELILFS
Sbjct: 628  KSFTLLTTEDKSLIDLAFNKKKADDRKLWLKNCVPGTFLDHSVHKIPIKDFINKELILFS 687

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
            MAD  RSIPSMVDG KPGQRK+++C FKRN   E KVAQ  GYV+EHSAYHHGE SL  T
Sbjct: 688  MADNVRSIPSMVDGFKPGQRKVMYCCFKRNLKSEIKVAQLVGYVAEHSAYHHGEMSLQQT 747

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +A DFVGSNN+NLL+P GQFGTR QGGKDAASARYIFT L+ ITR +F + DD LL+
Sbjct: 748  IIKLAHDFVGSNNVNLLEPAGQFGTRLQGGKDAASARYIFTNLANITRKIFVESDDALLN 807

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            Y+ ED  +IEP +Y+PI+P VLVNG++GIGTGW + IPNY+  +++ N++ LL+G+ M  
Sbjct: 808  YIIEDNLKIEPAFYVPIVPMVLVNGADGIGTGWLTKIPNYDLLELIDNIKLLLDGQEMRT 867

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII 954
            M P+YRGF G IE    K+    Y ++GI   V E +L I ELP++ WTQ Y+EFLE  I
Sbjct: 868  MVPFYRGFKGEIEDLGGKK----YRISGIY-GVEEESLTITELPVKIWTQTYKEFLEKKI 922

Query: 955  DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
            ++ +  ++ FR+Y  +  V FEV +       T    L KKF L+T    +N   FD  G
Sbjct: 923  EKGE--VKEFREYHTERNVHFEVSV-------TVSGELEKKFGLSTISIFNNFVCFDRHG 973

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             IKKYD+ E+IL+EF+ IRLEFY  RK+  L+ LE EL KLENKVRFI  VVNG +VV+ 
Sbjct: 974  KIKKYDSAEEILKEFYSIRLEFYNLRKEYLLKTLEEELRKLENKVRFIREVVNGTLVVSK 1033

Query: 1075 RKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSM 1134
            RK+ D++ EL QK +                  D+T                 YDYLL+M
Sbjct: 1034 RKKADIIAELEQKEYHKI---------------DDT-----------------YDYLLNM 1061

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            +I +LTLEK+  L  D      E D+L   + + LW+ DL+AL  +  +L + D RA+ E
Sbjct: 1062 SILSLTLEKIDRLNEDWQSTQREYDELLGKSVKQLWIYDLEALRTEYLKLLEDDERAQAE 1121

Query: 1195 RMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLK 1254
                 G+G         A+ APK+     K     + T A+       K  K K  +  K
Sbjct: 1122 HTVRTGDGGPSRRRVRRARNAPKDTDGTKKMRRTLKDTGAVKTTKRTAKEQKTKKISAAK 1181

Query: 1255 KA 1256
             A
Sbjct: 1182 NA 1183


>gi|70992793|ref|XP_751245.1| DNA topoisomerase II [Aspergillus fumigatus Af293]
 gi|66848878|gb|EAL89207.1| DNA topoisomerase II [Aspergillus fumigatus Af293]
 gi|159130301|gb|EDP55414.1| DNA topoisomerase II [Aspergillus fumigatus A1163]
          Length = 1660

 Score = 1193 bits (3087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1178 (51%), Positives = 810/1178 (68%), Gaps = 67/1178 (5%)

Query: 22   APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
            A +    E YQK +QLEHI+ RPDTYIGS+E+ TQ +W+Y+ E++ M ++ +SYVPGLYK
Sbjct: 49   ATSTNASEKYQKLTQLEHIIKRPDTYIGSVERTTQFMWVYDSETEGMKYKEVSYVPGLYK 108

Query: 82   IFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            IFDEI+VNAADNKQ D  MD ++V ID+E   ISV N+G G+P+EIH +EG+YVPELIFG
Sbjct: 109  IFDEIVVNAADNKQNDANMDEIRVTIDRESGEISVWNNGRGIPIEIHAKEGIYVPELIFG 168

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            HLLTSSNYDD  KK TGGRNG+GAKL N+FSTEF IET D ++ KKYKQ +TNNM K  +
Sbjct: 169  HLLTSSNYDDTQKKVTGGRNGFGAKLCNVFSTEFTIETQDSRQKKKYKQTWTNNMSKMGK 228

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
              I+  K G+++TKV+FKPD AKF M  ++DD  AL+K+RV DLAG     V V+LNG R
Sbjct: 229  AKITDAK-GEDYTKVTFKPDYAKFGMEGMDDDFEALVKRRVYDLAGTT--KVAVKLNGSR 285

Query: 262  VPVKSFAEYVDMYPKSVTRFHERVNE---------------RWEICVTLSEGQFQQVSFV 306
            +PV++F +Y++MY K++ R  ER  E               RWEI   +S+G F QVSFV
Sbjct: 286  IPVRNFKKYMEMYTKAIRR--ERGEEDTNAKDEIITCSPDPRWEIGFAVSDGSFHQVSFV 343

Query: 307  NGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFD 365
            N IAT  GGTHV+Y+A+Q+   +   V KKNKN A +K   ++NH+++FVNALI NPAF 
Sbjct: 344  NSIATTSGGTHVNYIADQICARLADQVKKKNKNGATLKPAQIRNHIFIFVNALIVNPAFT 403

Query: 366  SQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED 425
            SQTKE LT + S FGSKC L E+F KK+  ++ ++  +L +A  K  + LKK DG +   
Sbjct: 404  SQTKEQLTTKSSQFGSKCVLEEDFYKKIL-RTEVMNNILHFAQAKADQLLKKTDGGRRTR 462

Query: 426  VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
            +    KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR
Sbjct: 463  MNN-PKLVDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVR 521

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
            +AS  Q+  N EI NIK  LGL+   EY + + LRYGHLMIMTDQ               
Sbjct: 522  DASFEQISKNQEIQNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ--------------- 566

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN---- 601
                         DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPI K    +    
Sbjct: 567  -------------DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIAKVWKGDPKNP 613

Query: 602  GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWED 661
             K  SF++MP+YEAWKE    +   W  KYYKGLGTST+++ + YF+++  H K+F    
Sbjct: 614  TKQHSFFTMPEYEAWKEE-HKHERGWEHKYYKGLGTSTTEDAQVYFRDLDRHLKEFHTLQ 672

Query: 662  DQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
            D + E IELAFSKKK + RK+WL QF+PG  LD     I Y+DF+NKELILFSMAD QRS
Sbjct: 673  DHETELIELAFSKKKADERKEWLRQFKPGTFLDHSVDKITYTDFINKELILFSMADNQRS 732

Query: 722  IPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQD 781
            IPS+VDGLKPGQRK+L+  F+RN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ 
Sbjct: 733  IPSVVDGLKPGQRKVLYTCFRRNLRKDMKVVELAGHVSGMTAYQHGDASLQQTIVGLAQT 792

Query: 782  FVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQ 841
            FVGSNNIN L+P+G FG+R QGG+D ASARYI+TRLSP  R +F   DD LL Y  +DG+
Sbjct: 793  FVGSNNINCLEPSGNFGSRLQGGQDCASARYIYTRLSPFARRVFHAADDPLLTYNEDDGK 852

Query: 842  QIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRG 901
            +IEP  Y+P++P +L+NG++GIGTGWSS IPNYNP DIV N++RL++G+ ++PM PW+RG
Sbjct: 853  KIEPEVYVPVVPMILINGADGIGTGWSSSIPNYNPEDIVDNLKRLMDGQPVKPMQPWFRG 912

Query: 902  FGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDS 959
            F G +    +   G  +  +GII+E  +  + I ELPIR WTQD+++ LE II  ++  S
Sbjct: 913  FTGEV----TALGGDRFKFSGIIKETGDKEVEITELPIRTWTQDFKDKLEEIIKAEKTPS 968

Query: 960  FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKY 1019
            FI+ ++ Y+  T V F + + E+++   ++EGL +KFKL+ TI+T+N+  FD +G I KY
Sbjct: 969  FIKDYKDYNTHTKVHFVIQMDEKNLQSAREEGLEEKFKLSKTIATTNLVAFDPEGRITKY 1028

Query: 1020 DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTD 1079
             + + IL+EF+ +RL+FYE+RK+ QL  L+ EL KL N+ RF+  +++G++V++ +K+  
Sbjct: 1029 ASVDDILKEFYAVRLKFYERRKQYQLNELQKELDKLTNQARFVQMIIDGDLVISKKKKPA 1088

Query: 1080 LLLELRQKGFTPFPKNSKSIEAVVAG--ATDETEESEENPEVVNGVQSIDYDYLLSMAIG 1137
            L+ EL++ GF  FP   K I+AV AG  A    EE +E+      V S  YDYLL M + 
Sbjct: 1089 LVAELKKHGFKAFP---KVIDAVKAGEDAPVVEEEEDESGNDETEVLSSAYDYLLGMPLW 1145

Query: 1138 TLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            +LT E+V+ L     +   E+D L K + E +W +DLD
Sbjct: 1146 SLTHERVEKLRRQIGEKEVEIDALIKLSKEDIWKRDLD 1183


>gi|212531355|ref|XP_002145834.1| DNA topoisomerase II [Talaromyces marneffei ATCC 18224]
 gi|210071198|gb|EEA25287.1| DNA topoisomerase II [Talaromyces marneffei ATCC 18224]
          Length = 1696

 Score = 1193 bits (3086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1184 (51%), Positives = 815/1184 (68%), Gaps = 63/1184 (5%)

Query: 16   NVVGPTAPNKT-IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTIS 74
            ++V   AP +T   + YQK +Q EHI+ RPDTYIGSIEK TQ +W+Y+  +++M  R ++
Sbjct: 116  DLVASEAPTQTGAGDKYQKLTQYEHIIKRPDTYIGSIEKTTQQMWVYDSATESMAFREVT 175

Query: 75   YVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVY 134
            +VPGLYKIFDEI+VNAADNKQ D KMD +++ ID+E  +ISV N+G G+P+EIH +E +Y
Sbjct: 176  FVPGLYKIFDEIVVNAADNKQNDEKMDEIRITIDRESGVISVWNNGRGIPIEIHSKEKIY 235

Query: 135  VPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTN 194
            VPELIFGHLLTSSNYDD   K TGGRNG+GAKL N+FSTEF IET D ++ KKY Q +T+
Sbjct: 236  VPELIFGHLLTSSNYDDGQMKVTGGRNGFGAKLCNVFSTEFSIETCDSRQGKKYHQTWTD 295

Query: 195  NMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVK 254
            NM K  +  I+  K  D++TKV+FKPD  KF M  ++DD  AL+K+RV DLAG     V 
Sbjct: 296  NMSKVGKAKITSSK-SDDYTKVTFKPDYQKFGMDGMDDDFEALVKRRVYDLAGTA--KVA 352

Query: 255  VELNGHRVPVKSFAEYVDMYPKSVT--RFHERVNE-----------RWEICVTLSEGQFQ 301
            V+LNG R+PV++F +Y++MY K++   R  E VN+           RWE+   +S+G FQ
Sbjct: 353  VKLNGSRIPVRNFKKYMEMYTKAIKKERGEEAVNDKSEIVTASPDPRWEVGFAVSDGSFQ 412

Query: 302  QVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALID 360
            QVSFVN IAT  GG+HV+Y+A+Q+ N +   V KKNK  A++KA  ++NH+++FVNALI 
Sbjct: 413  QVSFVNSIATTSGGSHVNYIADQICNRLAEAVKKKNKQGASLKASQIRNHIFIFVNALIV 472

Query: 361  NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG 420
            NPAF SQTKE LT + S FGSKC L ++F KKV  K+ ++  +L +A  K  + LKK DG
Sbjct: 473  NPAFTSQTKEQLTTKPSQFGSKCILDDDFYKKVL-KTEVMTNILHFAEKKADQLLKKTDG 531

Query: 421  TKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGK 480
             +   +    KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGK
Sbjct: 532  GRRSRMNN-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGK 590

Query: 481  LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLL 540
            LLNVR+AS +Q+  N+EI NIK  +GL+   EY + + LRYGHLMIMTDQ          
Sbjct: 591  LLNVRDASVDQISKNAEIQNIKSFIGLQHKKEYTDTRGLRYGHLMIMTDQ---------- 640

Query: 541  WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK 600
                              DHDGSHIKGLLINF+   +PSLLKIP FL+EFITPI+K    
Sbjct: 641  ------------------DHDGSHIKGLLINFLQVQFPSLLKIPEFLIEFITPIIKVWKG 682

Query: 601  N----GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKD 656
            +     K  SF++MP+YE WKE    N  SW  KYYKGLGTST+++ + YF+++  H K+
Sbjct: 683  DPKNPTKSKSFFTMPEYEQWKEE-NKNDLSWQHKYYKGLGTSTTEDAQIYFRDLDRHLKE 741

Query: 657  FVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMA 716
            F    D + + I+LAFSKKK + RK+WL Q++PG  LD   K I Y+DF+NKELILFSMA
Sbjct: 742  FHTMQDHEAQLIDLAFSKKKADERKEWLRQYKPGTFLDHSTKQITYTDFINKELILFSMA 801

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D QRSIPS+VDGLKPGQRK+L+  FKRN  K+ KV + +G+VS  +AY HGE SL  TI+
Sbjct: 802  DNQRSIPSVVDGLKPGQRKVLYTCFKRNLKKDMKVVELAGHVSGMTAYQHGETSLQQTIV 861

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
            G+AQ FVGSNN+N L+P+G FG+R QGG D ASARYI+TRLSP  R +F + D+ LL Y 
Sbjct: 862  GLAQTFVGSNNLNCLEPSGNFGSRLQGGADCASARYIYTRLSPFARRVFNQQDEPLLTYN 921

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +DG++IEP  Y+P++P +L+NG++GIGTGWSS IPNYNP DIVAN++R+++GE  EPM 
Sbjct: 922  EDDGEKIEPELYVPVVPLILINGADGIGTGWSSSIPNYNPEDIVANLKRMMDGEEPEPMQ 981

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII-- 954
            PW+RGF G +    + +    Y  +G I E+N+  + I ELPIR WTQD+++ LE II  
Sbjct: 982  PWFRGFNGEV----TPQGPDRYKFSGRIHELNDKEVEITELPIRTWTQDFKDKLEDIIKA 1037

Query: 955  DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
            ++  SFI+ ++ Y+  T V F + + E+ +     EGL +KFKL+ TI+T+N+  FD +G
Sbjct: 1038 EKTPSFIKDYKDYNTHTKVHFVIQMDEKHLKAAVDEGLEEKFKLSRTIATTNLVAFDPEG 1097

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             I KY T   IL+EFF +RL++YE+RK+ QL  L+ +L K  N+ RFI  +++G++VV+ 
Sbjct: 1098 RITKYATVSDILKEFFAVRLKYYERRKQHQLSELQKQLDKFTNQARFIQMIIDGKLVVSK 1157

Query: 1075 RKRTDLLLELRQKGFTPFPKNSKSIEAVVAG-ATDETEESEENPEVVNGVQSIDYDYLLS 1133
            +K+  L+ EL++KGF PFPK +   EAV AG      EE E + E    + S  YDYLL 
Sbjct: 1158 KKKATLITELKEKGFKPFPKVA---EAVKAGETEQVVEEEESSEEANTEMASNAYDYLLG 1214

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            MAI +LT E+V+ LL        E+D+L K + E +W +DLD  
Sbjct: 1215 MAIWSLTQERVEKLLRQIGDKEVEIDELIKLSKEEIWRRDLDGF 1258


>gi|354474033|ref|XP_003499236.1| PREDICTED: DNA topoisomerase 2-beta-like [Cricetulus griseus]
          Length = 1726

 Score = 1193 bits (3086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1199 (52%), Positives = 819/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 152  SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 210

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 211  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 270

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 271  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 329

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDLAKF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 330  KHFDGEDYTCITFQPDLAKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 388

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 389  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 448

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 449  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 508

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 509  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 567

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 568  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 627

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 628  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 665

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 666  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 717

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 718  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 776

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 777  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 836

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 837  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 896

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 897  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 956

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 957  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 1016

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 1017 NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 1072

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 1073 TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1132

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1133 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLPAESTKLNNQARFILEKIQGKITIENRS 1192

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   ++T+   ++    +G  S  D++Y+L+M+
Sbjct: 1193 KKDLIQMLVQRGYESDPVRAWKEAQEKAAEEEDTQNQHDDSSSDSGTPSGPDFNYILNMS 1252

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1253 LWSLTKEKVEELIKQRDTKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1308


>gi|332816287|ref|XP_516332.3| PREDICTED: DNA topoisomerase 2-beta [Pan troglodytes]
          Length = 1621

 Score = 1193 bits (3086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1200 (52%), Positives = 819/1200 (68%), Gaps = 74/1200 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 45   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 103

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 104  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 163

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 164  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 222

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG C G  VKV  NG ++PV
Sbjct: 223  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCRG--VKVMFNGKKLPV 280

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
              F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG 
Sbjct: 281  NGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGR 340

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+
Sbjct: 341  HVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQ 400

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 401  PKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDD 459

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ 
Sbjct: 460  ANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIME 519

Query: 495  NSEIGNIKKILGLKQGVEYNNVKSL---RYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+    Y++ KSL   RYG +MIMTDQ                     
Sbjct: 520  NAEINNIIKIVGLQYKKSYDDAKSLKTLRYGKIMIMTDQ--------------------- 558

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P
Sbjct: 559  -------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIP 609

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LA
Sbjct: 610  EFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLA 668

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +
Sbjct: 669  FSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNE 728

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 729  RSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 788

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D
Sbjct: 789  QNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDD 848

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y
Sbjct: 849  NQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNY 908

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 909  KNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTD 964

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G 
Sbjct: 965  KTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGC 1024

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR
Sbjct: 1025 LKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENR 1084

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
             + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M
Sbjct: 1085 SKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNM 1144

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            ++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +++  E+
Sbjct: 1145 SLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVESQERED 1201


>gi|224007473|ref|XP_002292696.1| topoisomerase [Thalassiosira pseudonana CCMP1335]
 gi|220971558|gb|EED89892.1| topoisomerase [Thalassiosira pseudonana CCMP1335]
          Length = 1172

 Score = 1193 bits (3086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1197 (51%), Positives = 817/1197 (68%), Gaps = 77/1197 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT------MIHRTISYVPG 78
            KTIEE YQ K+QLEHILLRPDTYIGS E  TQ +++    + T      +I R ++Y PG
Sbjct: 1    KTIEETYQMKTQLEHILLRPDTYIGSTEPLTQPMFVLSTTTNTPPSPPRIIQREVTYTPG 60

Query: 79   LYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
              KI+DEI+VNAADNKQRDP MD + V ID E  +ISV N+G G+PV IH+++G YVP +
Sbjct: 61   FLKIYDEIIVNAADNKQRDPNMDRLDVDIDVEGGVISVCNNGKGIPVVIHKDQGCYVPTM 120

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            IFGHLLT SN+DD+  KTTGGRNGYGAKL NIFSTEFI+E  D     K+KQVF NNM K
Sbjct: 121  IFGHLLTGSNFDDDEMKTTGGRNGYGAKLANIFSTEFIVECVDSNEGLKFKQVFRNNMHK 180

Query: 199  KSEPNISKC-----KEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLG--- 250
              EP I KC     K+GD +TK++FKPD  KF+MT L +D V L+ KR  D+AG +G   
Sbjct: 181  TEEPKIKKCSASEMKKGD-YTKITFKPDFEKFSMTRLNEDAVGLLAKRAYDIAGTMGSKE 239

Query: 251  -KSVKVELNGHRVPVKSFAEYVDMY----PKSVTRFHERVNERWEICVTLSEGQFQQVSF 305
             K + V LNG ++ VK F  Y+ ++    P +    +E+V +RWE+ +++S+G FQQ+SF
Sbjct: 240  GKKLSVYLNGKKLSVKGFKSYLALFDGINPPAA---YEKVGDRWEVGISVSDGSFQQISF 296

Query: 306  VNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAF 364
            VN I+T KGG HVD++A  V   +  +V KKNK  A+VK   +KNHL +FVN L++NP F
Sbjct: 297  VNSISTTKGGGHVDHIAEMVVTRLKDLVKKKNKGGAHVKPAQIKNHLSIFVNCLVENPKF 356

Query: 365  DSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTE 424
            DSQTKE LT ++S+F S+ +LSE+FLK+V  K G+V++++++A FK+ + LK+  GTK  
Sbjct: 357  DSQTKENLTTKKSTFRSEVQLSEKFLKQVD-KCGVVDSIMAYAKFKEGQALKRKGGTKKN 415

Query: 425  DVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNV 484
             + GI+KL+DAN AG   S+ CTLI+TEGDSAK+LA++GLSVVGRD +GVFPL+GK LNV
Sbjct: 416  KLTGITKLDDANHAGTAKSKDCTLIITEGDSAKSLAVSGLSVVGRDFYGVFPLKGKPLNV 475

Query: 485  REASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            R+A+  Q++ N EI N+  I+GLK    Y   N+KSLRYGHLMIMTDQ            
Sbjct: 476  RDATHFQIMKNEEISNLVAIMGLKFDTTYTEENIKSLRYGHLMIMTDQ------------ 523

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG 602
                            DHDGSHIKGL+INF+H FWPSLL IP FL++FITPIVK T K  
Sbjct: 524  ----------------DHDGSHIKGLIINFLHKFWPSLLDIPDFLMQFITPIVKCT-KGK 566

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            K  +F+++P+YE WKE  G +A  W+IKYYKGLGTSTS E KEYF N+ +H+  F    D
Sbjct: 567  KFHTFFTLPEYEEWKEGTGNDAKGWTIKYYKGLGTSTSSEAKEYFSNLDIHEIIFNEISD 626

Query: 663  ---QDGEA-IELAFSKKKIEARKKWLLQFEPG---NHLDQKEKYIKYSDFVNKELILFSM 715
                 G A I++AFSK K+E RKKWL + E     N+ D +   + +S+FVN+EL+LFS 
Sbjct: 627  CIPSTGSALIDMAFSKSKVEERKKWLNRVEKDTFLNYRDAQRNGVNHSEFVNRELVLFSQ 686

Query: 716  ADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTI 775
             D  RSIP ++DG KP QRK+L+  FK+    E KVAQ +GY+ EHSAYHHG+ SL  TI
Sbjct: 687  YDNVRSIPHIMDGFKPSQRKVLYACFKKKLKAEIKVAQLAGYIGEHSAYHHGDMSLNGTI 746

Query: 776  LGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDY 835
            +GMAQ + GSNN+NLL P+GQFGTR  GGKD ASARYIFTRL  I R +F  DDD LL+Y
Sbjct: 747  IGMAQSYCGSNNLNLLYPSGQFGTRRMGGKDHASARYIFTRLEKIARAIFHPDDDALLNY 806

Query: 836  LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPM 895
            LN+DG  IEP +YMP+IP VLVNGS+GIGTGWSS I N++PR+++AN+++++NGE  E M
Sbjct: 807  LNDDGLSIEPEYYMPVIPMVLVNGSDGIGTGWSSTIQNHDPREVIANIKKMINGEEPELM 866

Query: 896  HPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII- 954
            HP + GF G I   +    G +Y V G IE   +TTL I ELP+ +WTQ+Y+ FLE ++ 
Sbjct: 867  HPHFAGFTGEITAESGSREG-SYIVEGKIERTGDTTLLITELPVGKWTQNYKAFLEGLMS 925

Query: 955  --DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTK--QEGLLKKFKLTTTISTSNMHLF 1010
              D++ S I  F++   DTTV F V  +EE++ + +  + GLLKKFKL+TT+ST+NMHLF
Sbjct: 926  GTDKDPSEISDFKENHTDTTVSFTVTATEENINKFEYGKGGLLKKFKLSTTMSTANMHLF 985

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
               G I KY+    IL  FFH RLE+Y KRK + LE L  EL   +NK RF+  V  G++
Sbjct: 986  SEDGKIVKYNGSVDILRTFFHHRLEYYVKRKDMLLEKLRRELKVYDNKARFVEEVYKGDL 1045

Query: 1071 VVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPE--VVNGVQSIDY 1128
            VV+NRKR++LL ELR K +  +PK S   E      TD+ +ES E+ E    +   +  Y
Sbjct: 1046 VVSNRKRSELLFELRDKEYDIYPKESNQAE------TDDEDESMESVEENASDAELAKGY 1099

Query: 1129 DYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELD 1185
            +YLL M I +LT E+ + L   + +  E+V+ L   +PE++W  DLDA++  LDE D
Sbjct: 1100 EYLLGMKIWSLTFERAKELRRQKTEKAEDVEKLEGTSPEAIWQTDLDAIEEALDERD 1156


>gi|317030635|ref|XP_001392968.2| DNA topoisomerase 2 [Aspergillus niger CBS 513.88]
          Length = 1707

 Score = 1193 bits (3086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 654/1376 (47%), Positives = 876/1376 (63%), Gaps = 111/1376 (8%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E YQK +QLEHI+ RPDTYIGS+E+ TQ +W+Y  ES  M +R +SYVPGLYKIFDEI+V
Sbjct: 134  EKYQKLTQLEHIIKRPDTYIGSVERTTQQMWVYSSESDGMEYREVSYVPGLYKIFDEIVV 193

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNKQ D  M  ++V +D+E  +ISV N+G G+P+E+H +E +YVPELIFGHLLTSSN
Sbjct: 194  NAADNKQNDENMSEIRVTVDRESGVISVWNNGRGIPIEMHAKEKIYVPELIFGHLLTSSN 253

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD  +K TGGRNG+GAKL N+FSTEF IET D  + KKY+Q +T NM K  +  I++ K
Sbjct: 254  YDDTQQKVTGGRNGFGAKLCNVFSTEFSIETQDSSQKKKYRQTWTENMTKIGKAKITEAK 313

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
             G+++TKV+FKPD AKF M  ++DD  AL+K+RV DLAG     V V+LNG R+P++ F 
Sbjct: 314  -GEDYTKVTFKPDYAKFGMDGMDDDFEALVKRRVYDLAGTA--KVNVKLNGTRIPIRGFK 370

Query: 269  EYVDMYPKSVTRFHER---------------VNERWEICVTLSEGQFQQVSFVNGIATIK 313
            +Y++MY K++ +  ER                + RWE+   +S+G FQQVSFVN IAT  
Sbjct: 371  KYMEMYTKAIRK--ERGDTGPAPKDEIITCSPDPRWEVGFAVSDGAFQQVSFVNSIATTS 428

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETL 372
            GGTHV+Y+A+Q+ N +   V KKNKN A +K   ++NH+++FVNALI NPAF SQTKE L
Sbjct: 429  GGTHVNYIADQICNRLAEQVKKKNKNGATLKTAQIRNHIFIFVNALIVNPAFTSQTKEQL 488

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKL 432
            T + S FGSKC L E+F KK+  K+ ++E +L +A  K  + LKK DG +   +    KL
Sbjct: 489  TTKASQFGSKCVLDEDFYKKIL-KTAVMENILHFAQQKADQMLKKTDGGRRSRMNN-PKL 546

Query: 433  EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
             DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+
Sbjct: 547  TDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASFDQI 606

Query: 493  LNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              N EI NIK  LGL+   EY + + LRYGHLMIMTDQ                      
Sbjct: 607  SKNQEIQNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ---------------------- 644

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFY 608
                  DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPIVK    +     K  SF+
Sbjct: 645  ------DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIVKVWKGDPKNPTKQRSFF 698

Query: 609  SMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAI 668
            +MP+YEAW E    +   W  KYYKGLGTST+++ + YF+++  H K+F    D + E I
Sbjct: 699  TMPEYEAWAEE-HQHERGWDHKYYKGLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEAELI 757

Query: 669  ELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
            ELAFSKKK + RK+WL QF+PG  LD   + I Y+DF+NKELILFSMAD  RSIPS+VDG
Sbjct: 758  ELAFSKKKADERKEWLRQFKPGTFLDHSVEKITYTDFINKELILFSMADNVRSIPSVVDG 817

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKPGQRK+L+  F+RN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ FVGSNNI
Sbjct: 818  LKPGQRKVLYTCFRRNLKKDMKVVELAGHVSGMTAYQHGDISLQQTIVGLAQTFVGSNNI 877

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            N L+P+G FG+R QGG D ASARYI+TRLSP  R +F   D+ LL Y  +DG+ IEP  Y
Sbjct: 878  NCLEPSGNFGSRLQGGSDCASARYIYTRLSPFARRIFHASDEPLLTYNVDDGKTIEPEVY 937

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            MP++P +L+NG++GIGTGWSS IPNYNP D+V N++RL+NGE ++PM PW+RGF G +  
Sbjct: 938  MPVVPMILINGADGIGTGWSSSIPNYNPEDVVDNLKRLMNGEEIKPMQPWFRGFTGEVTS 997

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQ 966
                  G  +  +GII+E  E  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ 
Sbjct: 998  I----GGDRFKFSGIIKETGEKEVEITELPIRTWTQDFKDKLEDIIKAEKTPSFIKDYKD 1053

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
            Y+  T V F + + E+ +    +EGL +KFKLT TI+T+N+  FD +G I KY T + IL
Sbjct: 1054 YNTHTKVHFVIQMDEKHLKSAVEEGLEEKFKLTKTIATTNLVAFDPEGRITKYATVDDIL 1113

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
            +EFF +RL++YE+RK+ QL  ++ EL KL N+ RF+  +++GE+VV+ +K+  L++EL+ 
Sbjct: 1114 KEFFAVRLKYYERRKQYQLNEMQKELEKLSNQARFVQMIIDGELVVSKKKKNVLVVELKD 1173

Query: 1087 KGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQG 1146
            KGF PFPK + + +A  A    E EE  E+ +  + + +  YDYLL MAI +LT E+V+ 
Sbjct: 1174 KGFKPFPKVADAAKAGEAEPAAEDEEESEDVDDTSNLSNA-YDYLLGMAIWSLTQERVER 1232

Query: 1147 LLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDELDKSDARAEEERMKIKGNG 1202
            L         E+D L K + E +W +DLD        QLD+        E  RM+   N 
Sbjct: 1233 LRRQIGDKEMEIDTLIKLSKEDIWKRDLDDFINEWRFQLDD--------EARRMRKVTNM 1284

Query: 1203 NGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLD 1262
                  K++       ARK     ++    E             PK + G KKA  +   
Sbjct: 1285 GRRTSSKLMTAVGRGGARKRKAAKDDDSDDEDF---------AAPKTKRGPKKAEPKGT- 1334

Query: 1263 DDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKKV 1322
                     L   L K     +S K +P+ D     +  +++V  KK   + + AA  K 
Sbjct: 1335 ---------LHSFLNK-----SSPKPKPAADDDDDDDDFEMEVMPKKNRGASKPAAPAKE 1380

Query: 1323 VTVETSDSEDEIIIDDDEAFEIAAPEEGKKGGRKAAGNSKAAKPAAETKKRGPAKK 1378
               ET +S+ EI+         AAP        KAA   KA  P +   K+ PAK+
Sbjct: 1381 EEKETGESDVEILPKKSR----AAP--------KAASKVKAEDPDSTEVKKAPAKR 1424


>gi|45384180|ref|NP_990413.1| DNA topoisomerase 2-beta [Gallus gallus]
 gi|3122959|sp|O42131.1|TOP2B_CHICK RecName: Full=DNA topoisomerase 2-beta; AltName: Full=DNA
            topoisomerase II, beta isozyme
 gi|2463529|dbj|BAA22540.1| DNA topoisomeraseII_beta [Gallus gallus]
          Length = 1627

 Score = 1192 bits (3085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1204 (51%), Positives = 822/1204 (68%), Gaps = 72/1204 (5%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T+   ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLY
Sbjct: 50   TSKKMSVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLY 108

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADNKQRD  M  +K+ ID E ++IS+ N+G G+PV  H+ E VYVP LIF
Sbjct: 109  KIFDEILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIF 168

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            G LLTSSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K S
Sbjct: 169  GQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTS 228

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
            EP I K  EGD++T ++F+PDL+KF M +L+ D+V+LM +R  DLAG   K VKV LNG 
Sbjct: 229  EPKI-KHFEGDDYTCITFQPDLSKFKMENLDKDIVSLMTRRAYDLAGSC-KGVKVMLNGK 286

Query: 261  RVPVKSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATI 312
            ++PV  F  YVD+Y K        ++   HE VNERW++C+TLSE  FQQ+SFVN IAT 
Sbjct: 287  KLPVNGFRSYVDLYVKDKLDETGVALKVIHEVVNERWDVCLTLSEKGFQQISFVNSIATT 346

Query: 313  KGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
            KGG HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVFVN LI+NP+FDSQTKE 
Sbjct: 347  KGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNCLIENPSFDSQTKEN 406

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGIS 430
            +TL+  SFGSKC+LSE+F K   +  GI+E++L+W  FK    L KK    K   ++GI 
Sbjct: 407  MTLQPKSFGSKCQLSEKFFK-AASNCGIIESILNWVKFKAQTQLNKKCSSVKHSKIKGIP 465

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KL+DAN AGG++S  CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  
Sbjct: 466  KLDDANDAGGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHK 525

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            Q++ N+EI NI KI+GL+    Y +   +KSLRYG +MIMTDQ                 
Sbjct: 526  QIMENAEINNIIKIVGLQYKKSYEDPESLKSLRYGKIMIMTDQ----------------- 568

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSF 607
                       D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSF
Sbjct: 569  -----------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSF 615

Query: 608  YSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA 667
            YS+P+++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  A
Sbjct: 616  YSIPEFDEWKKHME-NHKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAA 674

Query: 668  IELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSM 715
            I LAFSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS 
Sbjct: 675  ITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSN 734

Query: 716  ADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTI 775
            +D +RSIPS+VDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI
Sbjct: 735  SDNERSIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTI 794

Query: 776  LGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDY 835
            + +AQ+FVGSNN+NLLQP GQFGTR  GGKDAAS RYIFT LSP+ R LFP  DD LL +
Sbjct: 795  VNLAQNFVGSNNVNLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARLLFPSVDDNLLKF 854

Query: 836  LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPM 895
            L +D Q++EP WY+PIIP VLVNG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM
Sbjct: 855  LYDDNQRVEPEWYIPIIPMVLVNGAEGIGTGWACKLPNYDTREIVNNVRRMLDGLDPHPM 914

Query: 896  HPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII 954
             P Y+ F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++
Sbjct: 915  LPNYKNFRGTIQELGQNQ----YVVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPML 970

Query: 955  ---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFD 1011
               ++  + I  +++Y  DTTV F V ++EE + + +  GL K FKL T+++ ++M LFD
Sbjct: 971  NGTEKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSMVLFD 1030

Query: 1012 SKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIV 1071
              G +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I 
Sbjct: 1031 HMGCLKKYETVQDILKEFFDLRLHYYSLRKEWLVGMLGAESTKLNNQARFILEKIQGKIT 1090

Query: 1072 VNNRKRTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + NR + DL+  L Q+G+   P K  K  +   A   D    +++           D++Y
Sbjct: 1091 IENRSKRDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDPQNANDDASSASGSTSGPDFNY 1150

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            +L+M++ +LT EKV+ L+  RD    E++DL++ +   LW +DL A    ++EL+K +A+
Sbjct: 1151 ILNMSLWSLTKEKVEELIKHRDSKERELNDLKRKSASDLWKEDLAAF---VEELEKVEAQ 1207

Query: 1191 AEEE 1194
              E+
Sbjct: 1208 ERED 1211


>gi|196000919|ref|XP_002110327.1| hypothetical protein TRIADDRAFT_23201 [Trichoplax adhaerens]
 gi|190586278|gb|EDV26331.1| hypothetical protein TRIADDRAFT_23201, partial [Trichoplax adhaerens]
          Length = 1164

 Score = 1192 bits (3085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1202 (52%), Positives = 825/1202 (68%), Gaps = 93/1202 (7%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKKSQLEHILLRPDTYIGS+E  TQ +W+ E+    M++++I+Y PGLYKIFDE
Sbjct: 13   SVERIYQKKSQLEHILLRPDTYIGSVEHITQTMWVIED--GKMMNKSITYPPGLYKIFDE 70

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDP+MD +K+ ID E++L+ + N+G G+PVEIH+EE VYVP LIFGHLLT
Sbjct: 71   ILVNAADNKQRDPRMDTIKITIDPENNLLKIWNNGRGIPVEIHREENVYVPTLIFGHLLT 130

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ +K TGGRNGYGAKL NIFSTEF +ET      K++ Q + NNM K  EP I+
Sbjct: 131  SSNYNDDERKVTGGRNGYGAKLCNIFSTEFKVETYSADSGKQFSQTWNNNMSKAREPKIT 190

Query: 206  KC-KEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
               K    +T ++FKPDL KF +THL  D+V+LM +R  D+A    + VKV LNG R+P+
Sbjct: 191  AIEKSKQEFTCITFKPDLQKFGLTHLTSDIVSLMTRRAYDIAAA-ARGVKVYLNGDRIPI 249

Query: 265  KSFAEYVDMY--------------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIA 310
            K+F +YV+++               + +T  HE VN RWE+C+T S+  FQQ SFVN IA
Sbjct: 250  KTFKDYVELFLANEEKDDGEEDKEKRKIT--HEIVNGRWEVCLTASDRGFQQASFVNSIA 307

Query: 311  TIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTK 369
            T KGGTHV++V +Q+   +M  V KKNK   +VK + +KNH+WVF+N LI+NP+FDSQTK
Sbjct: 308  TTKGGTHVNHVVDQLVEKLMGAVKKKNKGGIDVKPYQIKNHMWVFINCLIENPSFDSQTK 367

Query: 370  ETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRG 428
            E +TLR  SFGS C LSE+F+K      G+VE +L+W  FK    L KK   +K   ++G
Sbjct: 368  ENMTLRAKSFGSSCNLSEKFIKGALG-CGVVERILNWVRFKTQAQLSKKCSASKHSKLKG 426

Query: 429  ISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREAS 488
            I KL+DAN AG RNS  CTLILTEGDSAKALA++GLSVVGRD++GVFPLRGKLLN REAS
Sbjct: 427  IPKLDDANDAGTRNSSDCTLILTEGDSAKALAVSGLSVVGRDKYGVFPLRGKLLNTREAS 486

Query: 489  SNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
            S QV+ N+EI NI KILGL    +YN+   +KSLRYG+LMIM DQ               
Sbjct: 487  SKQVMENAEINNIIKILGLHYNKKYNDDVSLKSLRYGNLMIMADQ--------------- 531

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL 605
                         D DGSHIKGLLINFIH  WPSLL+ P FL EFITPIVK T K    +
Sbjct: 532  -------------DQDGSHIKGLLINFIHHNWPSLLQQP-FLKEFITPIVKVT-KGKNEI 576

Query: 606  SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG 665
            +FYS+P++E WK++   +  SW +KYYKGLGTST KE KEYF +++ H+  F ++ + D 
Sbjct: 577  AFYSIPEFEEWKQNTA-SYKSWKVKYYKGLGTSTPKEAKEYFADMSRHRVAFRYDGNDDD 635

Query: 666  EAIELAFSKKKIEARKKWL-----------LQFEPGNHLDQKE-KYIKYSDFVNKELILF 713
             AI+LAFSKK I  RK+WL           L  +P  +L  KE   I YSDFVNKELI F
Sbjct: 636  TAIQLAFSKKMISERKEWLNKSMEDKKNRKLNNKPEPYLYGKEVSDISYSDFVNKELIHF 695

Query: 714  SMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAS 773
            S AD  RSIPS++DGLKPGQRK+LF  FKRN  K+ KVAQ +G V+E SAYHHGE SL  
Sbjct: 696  SNADNIRSIPSLMDGLKPGQRKVLFTCFKRNDKKDIKVAQLAGSVAEMSAYHHGEASLMG 755

Query: 774  TILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLL 833
            TI+ +AQ+FVGSNNINLLQP GQFGTR  GGKD+ASARYIFT LSP+ R++F + D+ LL
Sbjct: 756  TIINLAQNFVGSNNINLLQPIGQFGTRLHGGKDSASARYIFTMLSPVARYMFDQKDEPLL 815

Query: 834  DYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMME 893
            +Y  ED  +IEP WY P+IP VLVNG+EGIGTG+S+ IPNYNPR+IV N++RLL GE   
Sbjct: 816  EYQFEDNLRIEPDWYAPLIPVVLVNGAEGIGTGYSTRIPNYNPREIVDNLKRLLAGEEPI 875

Query: 894  PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLES 952
             MHPWY+ F G I++    +    Y + G+I+++NETTL I ELPIR WTQ Y+E  LE 
Sbjct: 876  EMHPWYKNFKGEIKQVEENK----YQIDGVIKKINETTLEIVELPIRTWTQAYKEGVLEP 931

Query: 953  II---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHL 1009
            ++   ++  SFI  +++Y  DTTV F V L+E +M   ++ GLLKKFKL  + ST++M L
Sbjct: 932  MLHGGEKTPSFISNYKEYHTDTTVRFIVTLTEANMEAAEKIGLLKKFKLEGSFSTNSMVL 991

Query: 1010 FDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGE 1069
            FD+ G +++Y   ++IL+EF+  +LEFY KRK+     LE E  KL N+ RFIL  ++G+
Sbjct: 992  FDAHGCLRRYGNAQEILKEFYETKLEFYVKRKEWLEGLLEAESRKLSNQARFILEKIDGK 1051

Query: 1070 IVVNNRKRTDLLLELRQKGFTPFPKNS---KSIEAVVAGATDETE-ESEENPEVVNGVQS 1125
            + + N+ + DL+  L+   F   P  S   K    V +  +D +E E++E P        
Sbjct: 1052 LAIENKSKRDLIAMLKSANFDSDPVKSWQNKQKSVVESEESDASEQETDEGP-------- 1103

Query: 1126 IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELD 1185
             D++Y+L+M + +LT E+   L+A+++K   E   L++ TP+ LW++D++     L+EL+
Sbjct: 1104 -DFNYILNMNMWSLTKERKDELIANKNKKIAEYQTLKEKTPKMLWLEDIEVF---LEELE 1159

Query: 1186 KS 1187
             S
Sbjct: 1160 VS 1161


>gi|410353945|gb|JAA43576.1| topoisomerase (DNA) II beta 180kDa [Pan troglodytes]
          Length = 1621

 Score = 1192 bits (3085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1200 (52%), Positives = 820/1200 (68%), Gaps = 74/1200 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 45   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 103

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 104  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 163

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 164  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 222

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG C G  VKV  NG ++PV
Sbjct: 223  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCRG--VKVMFNGKKLPV 280

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
              F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG 
Sbjct: 281  NGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGR 340

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+
Sbjct: 341  HVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQ 400

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 401  PKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDD 459

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ 
Sbjct: 460  ANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIME 519

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                     
Sbjct: 520  NAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ--------------------- 558

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P
Sbjct: 559  -------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIP 609

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LA
Sbjct: 610  EFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLA 668

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +
Sbjct: 669  FSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNE 728

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 729  RSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 788

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D
Sbjct: 789  QNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDD 848

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y
Sbjct: 849  NQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNY 908

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 909  KNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTD 964

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G 
Sbjct: 965  KTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGC 1024

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR
Sbjct: 1025 LKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENR 1084

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
             + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M
Sbjct: 1085 SKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNM 1144

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            ++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +++  E+
Sbjct: 1145 SLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVESQERED 1201


>gi|19913408|ref|NP_001059.2| DNA topoisomerase 2-beta [Homo sapiens]
 gi|119584761|gb|EAW64357.1| topoisomerase (DNA) II beta 180kDa, isoform CRA_a [Homo sapiens]
 gi|162317664|gb|AAI56331.1| Topoisomerase (DNA) II beta 180kDa [synthetic construct]
 gi|162318196|gb|AAI57119.1| Topoisomerase (DNA) II beta 180kDa [synthetic construct]
          Length = 1621

 Score = 1192 bits (3085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1200 (52%), Positives = 820/1200 (68%), Gaps = 74/1200 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 45   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 103

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 104  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 163

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 164  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 222

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG C G  VKV  NG ++PV
Sbjct: 223  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCRG--VKVMFNGKKLPV 280

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
              F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG 
Sbjct: 281  NGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGR 340

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+
Sbjct: 341  HVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQ 400

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 401  PKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDD 459

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ 
Sbjct: 460  ANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIME 519

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                     
Sbjct: 520  NAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ--------------------- 558

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P
Sbjct: 559  -------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIP 609

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LA
Sbjct: 610  EFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLA 668

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +
Sbjct: 669  FSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNE 728

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 729  RSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 788

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D
Sbjct: 789  QNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDD 848

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y
Sbjct: 849  NQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNY 908

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 909  KNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTD 964

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G 
Sbjct: 965  KTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGC 1024

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR
Sbjct: 1025 LKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENR 1084

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
             + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M
Sbjct: 1085 SKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNM 1144

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            ++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +++  E+
Sbjct: 1145 SLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVESQERED 1201


>gi|37231|emb|CAA48197.1| DNA topoisomerase II [Homo sapiens]
          Length = 1621

 Score = 1192 bits (3085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1200 (52%), Positives = 820/1200 (68%), Gaps = 74/1200 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 45   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 103

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 104  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 163

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 164  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 222

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG C G  VKV  NG ++PV
Sbjct: 223  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCRG--VKVMFNGKKLPV 280

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
              F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG 
Sbjct: 281  NGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGR 340

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+
Sbjct: 341  HVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQ 400

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 401  PKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDD 459

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ 
Sbjct: 460  ANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIME 519

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                     
Sbjct: 520  NAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ--------------------- 558

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P
Sbjct: 559  -------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIP 609

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LA
Sbjct: 610  EFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLA 668

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +
Sbjct: 669  FSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNE 728

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 729  RSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 788

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D
Sbjct: 789  QNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDD 848

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y
Sbjct: 849  NQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNY 908

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 909  KNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTD 964

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G 
Sbjct: 965  KTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGC 1024

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR
Sbjct: 1025 LKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENR 1084

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
             + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M
Sbjct: 1085 SKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNM 1144

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            ++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +++  E+
Sbjct: 1145 SLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVESQERED 1201


>gi|240952142|ref|XP_002399322.1| DNA topoisomerase II, putative [Ixodes scapularis]
 gi|215490528|gb|EEC00171.1| DNA topoisomerase II, putative [Ixodes scapularis]
          Length = 1582

 Score = 1192 bits (3084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1218 (51%), Positives = 832/1218 (68%), Gaps = 71/1218 (5%)

Query: 8    PLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYE-EESK 66
            P    N A        N ++E +YQKKSQLEHILLRPDTYIGS+E  +Q +W+Y+ EE+ 
Sbjct: 13   PAAKQNGAPAAASNKGNLSVERIYQKKSQLEHILLRPDTYIGSVEPISQTMWVYDGEENG 72

Query: 67   TMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE 126
             M +R+++YVPGLYKIFDEILVNAADNKQRD  MD +K+ ID + + IS+ N+G G+PV 
Sbjct: 73   GMKNRSVTYVPGLYKIFDEILVNAADNKQRDKNMDCIKIEIDPDANRISIWNNGRGIPVV 132

Query: 127  IHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLK 186
             H+ E ++VP LIFGHLLTSSNY+D  KK TGGRNGYGAKL NIFST+FI+ET      +
Sbjct: 133  EHKVEKMFVPTLIFGHLLTSSNYNDEEKKVTGGRNGYGAKLCNIFSTKFIVETYSRSEKR 192

Query: 187  KYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLA 246
             +KQV+ +NM K +EP I    +G+++T+++F PDL+KF+M  L+ D VAL+ +R  D+A
Sbjct: 193  LFKQVWEDNMKKTTEPKIRTEPKGEDFTRITFHPDLSKFSMEKLDADTVALLSRRAYDVA 252

Query: 247  GCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSE- 297
            GC  + VKV LNG R+PVK F +YV ++ K         +T  +E  ++RWE+ VTLSE 
Sbjct: 253  GCT-RGVKVYLNGKRLPVKGFKDYVGLFLKDKEDEAGNPLTVVYESPSDRWEVAVTLSEA 311

Query: 298  GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHN--VKNHLWVFV 355
            G+F+Q+SFVN IAT KGG+HVDY+A Q+   V+  V KKNK A VK  N  +K+H+WVFV
Sbjct: 312  GEFRQMSFVNSIATTKGGSHVDYIAEQLTKKVLENVKKKNK-AGVKIQNKQIKDHVWVFV 370

Query: 356  NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
            N LI+NP FDSQTKE +TL+   FGSKCELS++F  +V  K G+VE ++SW  FK  K L
Sbjct: 371  NCLIENPTFDSQTKENMTLQAKKFGSKCELSDKFYNQVL-KCGVVEAVMSWLTFKAQKQL 429

Query: 416  -KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGV 474
              K    K   ++GI KLEDAN AG RNS  CTLILTEGDSAK+LA++GL+VVGRD++GV
Sbjct: 430  GMKCSAKKHSKLKGIPKLEDANDAGTRNSVDCTLILTEGDSAKSLAVSGLAVVGRDKYGV 489

Query: 475  FPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNV---KSLRYGHLMIMTDQV 531
            FPL+GK+LNVREAS  Q+L N+EI N+ KI+GL+   +Y +V   K+LRYG LMIMTDQ 
Sbjct: 490  FPLKGKMLNVREASHKQILENAEINNVIKIMGLQYKKKYESVEDLKALRYGRLMIMTDQ- 548

Query: 532  LLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI 591
                                       D DGSHIKGL+INFIH  WPSLLK+P FL EFI
Sbjct: 549  ---------------------------DQDGSHIKGLVINFIHHNWPSLLKLP-FLEEFI 580

Query: 592  TPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 651
            TPIVKA+ K    +SFYS+P++E WK +   +   W +KYYKGLGTST KE KEYF ++ 
Sbjct: 581  TPIVKAS-KGKNEISFYSLPEFEEWKTATD-DWQRWKVKYYKGLGTSTGKEAKEYFSDML 638

Query: 652  LHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHLDQKE-KY 699
             H+  F ++  +D  AIELAFSKK  + RK WL               P  +L  KE K 
Sbjct: 639  RHRIKFKYQGGEDDRAIELAFSKKLADQRKDWLRGGMEERKQRRELGLPEIYLYGKETKN 698

Query: 700  IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVS 759
            I Y DFVNKELILFS  D +RSIPS+VDGLKPGQRK+L+  FKRN  +E KVAQ +G V+
Sbjct: 699  ITYEDFVNKELILFSNMDNERSIPSLVDGLKPGQRKVLYTCFKRNDKREIKVAQLAGSVA 758

Query: 760  EHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSP 819
            EHSAYHHGE SL STI+G+AQDFVGSNNINLL P GQFGTR QGGKDAAS RYIFT LSP
Sbjct: 759  EHSAYHHGEMSLMSTIIGLAQDFVGSNNINLLLPIGQFGTRLQGGKDAASPRYIFTMLSP 818

Query: 820  ITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDI 879
            + R + P  DD +L++L +D Q+IEP +YMPI+P VLVNG+EGIGTGWS+ +PNY+PR++
Sbjct: 819  LARLIVPALDDPVLNHLYDDNQKIEPEFYMPILPMVLVNGAEGIGTGWSTKVPNYDPREV 878

Query: 880  VANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPI 939
            VAN+RR++ G+  +PM PW++ F GT+++   +     + V+G +  ++  ++ I ELP+
Sbjct: 879  VANLRRMIAGDEPKPMKPWFKNFKGTVDQVEEQR----FVVSGEVALLSSNSIEITELPV 934

Query: 940  RRWTQDYRE-FLESIIDQNDS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKK 995
            R WTQ+Y+E  LE+++   +     I  +++Y  DTTV F V +SE+ + + + EGL K 
Sbjct: 935  RTWTQNYKENVLETMLHGTEKVPPMITDYKEYHTDTTVRFVVTMSEDKLSKAQDEGLHKV 994

Query: 996  FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKL 1055
            FKL TT+ TS+M LF+SKGV+  +    +I+++F+  RLE Y+KRK   L  L  E  +L
Sbjct: 995  FKLQTTLCTSSMVLFNSKGVLTTFRNSTEIMQDFYETRLEGYKKRKAYMLGLLTAEAKRL 1054

Query: 1056 ENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESE 1114
            EN+ RFIL  ++  I + NRKR +++L LR++G+ P P    K  +A      +  E+ E
Sbjct: 1055 ENQARFILEKIDNVIKIENRKRKEMILTLRERGYDPDPLLEWKKQQAQSEDDGESQEDDE 1114

Query: 1115 ENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDL 1174
            +  +      S  Y+YLL M + +LT E+ + LLA RD+   E++ L++ TP  LW  DL
Sbjct: 1115 DEEDKDKDGGSTGYNYLLGMPLWSLTRERKEDLLAKRDQKKGELESLQQKTPADLWSMDL 1174

Query: 1175 DALDMQLDELDKSDARAE 1192
            D    +LDE++++  R E
Sbjct: 1175 DVFMAKLDEVEEAQRRDE 1192


>gi|410971557|ref|XP_003992234.1| PREDICTED: DNA topoisomerase 2-beta [Felis catus]
          Length = 1628

 Score = 1192 bits (3084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1199 (52%), Positives = 820/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 55   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 113

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 114  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 173

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 174  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 232

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 233  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 291

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 292  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 351

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 352  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 411

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 412  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 470

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 471  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 530

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 531  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 568

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 569  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 620

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 621  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 679

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 680  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 739

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 740  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 799

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS ++R LFP  DD LL +L +D 
Sbjct: 800  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLSRLLFPAVDDNLLKFLYDDN 859

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 860  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 919

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 920  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 975

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 976  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1035

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1036 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1095

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S  D++Y+L+M+
Sbjct: 1096 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPSGPDFNYILNMS 1155

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1156 LWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1211


>gi|3024753|sp|Q64399.1|TOP2B_CRILO RecName: Full=DNA topoisomerase 2-beta; AltName: Full=DNA
            topoisomerase II, beta isozyme
 gi|2137065|pir||S59969 DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) isoform beta -
            Chinese hamster
 gi|790988|emb|CAA60173.1| DNA topoisomerase (ATP-hydrolysing) [Cricetulus longicaudatus]
          Length = 1612

 Score = 1192 bits (3084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1199 (52%), Positives = 819/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 38   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 96

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 97   ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 156

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 157  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 215

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDLAKF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 216  KHFDGEDYTCITFQPDLAKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 274

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 275  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 334

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 335  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 394

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 395  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 453

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 454  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 513

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 514  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 551

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 552  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 603

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 604  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 662

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 663  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 722

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 723  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 782

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 783  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 842

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 843  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 902

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 903  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 958

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 959  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1018

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1019 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1078

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   ++T+   ++    +G  S  D++Y+L+M+
Sbjct: 1079 KKDLIQMLVQRGYESDPVRAWKEAQEKAAEEEDTQNQHDDSSSDSGTPSGPDFNYILNMS 1138

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1139 LWSLTKEKVEELIKQRDTKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1194


>gi|432115884|gb|ELK37029.1| DNA topoisomerase 2-beta, partial [Myotis davidii]
          Length = 1608

 Score = 1192 bits (3084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1201 (52%), Positives = 820/1201 (68%), Gaps = 72/1201 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 27   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 85

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 86   ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 145

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 146  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 204

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 205  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 263

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 264  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 323

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 324  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 383

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 384  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 442

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 443  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 502

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 503  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 540

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 541  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 592

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 593  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 651

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 652  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 711

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 712  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 771

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 772  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARRLFPIVDDNLLKFLYDDN 831

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 832  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 891

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 892  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 947

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 948  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1007

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1008 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1067

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S  D++Y+L+M+
Sbjct: 1068 KKDLIQMLVQRGYESDPVKAWKEAQEKATEEEETQNQHDDSSSDSGTPSGPDFNYILNMS 1127

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEER 1195
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+ 
Sbjct: 1128 LWSLTKEKVEELIKQRDSKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQEREDL 1184

Query: 1196 M 1196
            M
Sbjct: 1185 M 1185


>gi|332215374|ref|XP_003256818.1| PREDICTED: DNA topoisomerase 2-beta [Nomascus leucogenys]
          Length = 1621

 Score = 1192 bits (3084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1200 (52%), Positives = 820/1200 (68%), Gaps = 74/1200 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 45   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 103

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 104  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 163

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 164  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 222

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG C G  VKV  NG ++PV
Sbjct: 223  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCRG--VKVMFNGKKLPV 280

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
              F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG 
Sbjct: 281  NGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGR 340

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV +QV   ++ VV KKNK   +VK   VKNH+W+F+N LI+NP FDSQTKE +TL+
Sbjct: 341  HVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWIFINCLIENPTFDSQTKENMTLQ 400

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 401  PKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDD 459

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ 
Sbjct: 460  ANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIME 519

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                     
Sbjct: 520  NAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ--------------------- 558

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P
Sbjct: 559  -------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIP 609

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LA
Sbjct: 610  EFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLA 668

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +
Sbjct: 669  FSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNE 728

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 729  RSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 788

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D
Sbjct: 789  QNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDD 848

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y
Sbjct: 849  NQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNY 908

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 909  KNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTD 964

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G 
Sbjct: 965  KTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGC 1024

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR
Sbjct: 1025 LKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENR 1084

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
             + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M
Sbjct: 1085 SKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNM 1144

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            ++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +++  E+
Sbjct: 1145 SLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVESQERED 1201


>gi|20141946|sp|Q02880.3|TOP2B_HUMAN RecName: Full=DNA topoisomerase 2-beta; AltName: Full=DNA
            topoisomerase II, beta isozyme
          Length = 1626

 Score = 1192 bits (3084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1200 (52%), Positives = 820/1200 (68%), Gaps = 74/1200 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 50   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 108

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 109  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 168

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 169  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 227

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG C G  VKV  NG ++PV
Sbjct: 228  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCRG--VKVMFNGKKLPV 285

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
              F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG 
Sbjct: 286  NGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGR 345

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+
Sbjct: 346  HVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQ 405

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 406  PKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDD 464

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ 
Sbjct: 465  ANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIME 524

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                     
Sbjct: 525  NAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ--------------------- 563

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P
Sbjct: 564  -------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIP 614

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LA
Sbjct: 615  EFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLA 673

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +
Sbjct: 674  FSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNE 733

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 734  RSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 793

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D
Sbjct: 794  QNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDD 853

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y
Sbjct: 854  NQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNY 913

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 914  KNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTD 969

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G 
Sbjct: 970  KTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGC 1029

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR
Sbjct: 1030 LKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENR 1089

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
             + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M
Sbjct: 1090 SKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNM 1149

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            ++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +++  E+
Sbjct: 1150 SLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVESQERED 1206


>gi|417413901|gb|JAA53260.1| Putative dna topoisomerase type ii, partial [Desmodus rotundus]
          Length = 1603

 Score = 1192 bits (3083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1201 (52%), Positives = 821/1201 (68%), Gaps = 72/1201 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 27   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 85

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 86   ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 145

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 146  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 204

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 205  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 263

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 264  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 323

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 324  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 383

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 384  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 442

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 443  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 502

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 503  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 540

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 541  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 592

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 593  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 651

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 652  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 711

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 712  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 771

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LSP+ R LFP  DD LL +L +D 
Sbjct: 772  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARRLFPAVDDNLLKFLYDDN 831

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 832  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 891

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 892  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 947

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 948  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1007

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1008 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKIAIENRS 1067

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +E++   ++    +G  S  D++Y+L+M+
Sbjct: 1068 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEESQNQHDDSSSDSGTPSGPDFNYILNMS 1127

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEER 1195
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+ 
Sbjct: 1128 LWSLTKEKVEELIKQRDSKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQEREDI 1184

Query: 1196 M 1196
            M
Sbjct: 1185 M 1185


>gi|426201630|gb|EKV51553.1| hypothetical protein AGABI2DRAFT_197775 [Agaricus bisporus var.
            bisporus H97]
          Length = 1551

 Score = 1192 bits (3083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 601/1169 (51%), Positives = 795/1169 (68%), Gaps = 62/1169 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            T+ E Y K SQ EHIL RPD+YIGSIE  TQ +W Y+  SK M+ R + YVPG  KI DE
Sbjct: 95   TVSETYTKLSQHEHILKRPDSYIGSIETITQPMWTYDAGSKRMVQRDVKYVPGFLKIVDE 154

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNK  D  MD +KV ID E + ISV+N+G G+PVEIH +E +Y+PELIFGHLL+
Sbjct: 155  ILVNAADNKINDTSMDTIKVNIDVEENTISVYNNGRGIPVEIHSKEKIYIPELIFGHLLS 214

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NI+S EF +ETAD    +KYKQ++T NM    +  I+
Sbjct: 215  SSNYDDDEKKLTGGRNGYGAKLANIYSHEFTVETADKNTDQKYKQIWTENMTNCGKAKIT 274

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+ WT+++FKPDL +F M  +++D  +L++KRV D+AG + + VKV LN  R+ +K
Sbjct: 275  KNSKGEEWTRITFKPDLQRFGMDSIDEDTASLLRKRVYDVAGTV-RDVKVYLNDERLKIK 333

Query: 266  SFAEYVDMYPKSVTR----------------FHERVNERWEICVTLSEGQFQQVSFVNGI 309
            +F +YV+MY  SV                   +ER++ERWEI  T+S+G FQ V+F N I
Sbjct: 334  NFKQYVEMYVDSVQAEAAEASGGAAQPKSQVIYERLSERWEIAFTVSDGSFQHVAFANSI 393

Query: 310  ATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTK 369
            +TIKGGTHV+Y+A+ ++ H+M  V+KKNK A VK   ++NH+W+FVNALI+NP FD QTK
Sbjct: 394  STIKGGTHVNYIADHLSKHIMTAVSKKNKGAPVKPFQIRNHMWLFVNALIENPMFDGQTK 453

Query: 370  ETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGI 429
            ETLTL  S FGSK  + E+F+KKV  K+ IV+ +L WA  K  + +KK DG+K   + G+
Sbjct: 454  ETLTLPSSKFGSKPTIKEDFIKKVL-KTAIVDNVLHWAKAKADQQIKKTDGSKRNRLVGL 512

Query: 430  SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS 489
            +KL DAN AG R ++ CTLILTEGDSAKALA+AGL VVGRD FGVFPLRGKLLNVREA  
Sbjct: 513  TKLSDANNAGTRLAKDCTLILTEGDSAKALAVAGLGVVGRDYFGVFPLRGKLLNVREAKH 572

Query: 490  NQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
            +Q++ N EI NIKKILGL+   +Y++V SLRYG LMIM DQ                   
Sbjct: 573  DQIMKNEEIQNIKKILGLQHNKDYSDVSSLRYGRLMIMADQ------------------- 613

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYS 609
                     DHDGSHIKGLLINF   F+PSLLK+P FLVEF+TPIV+   K      F++
Sbjct: 614  ---------DHDGSHIKGLLINFFDHFYPSLLKLPEFLVEFVTPIVRII-KGKHRRDFFT 663

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            +P+YE W      +A  W  KYYKGLGTS   + ++YF ++  H   F    + D + I+
Sbjct: 664  LPEYEKWLLE-APDAHKWESKYYKGLGTSNDADARDYFSHMAKHMIPFAPTQNGDRDLID 722

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKKK + RK+WL QF PG  LD   + I YS+F+NKELI FSMAD  RSIP + DGL
Sbjct: 723  LAFSKKKADDRKEWLRQFRPGTFLDHNLEEIPYSEFINKELICFSMADNIRSIPCVADGL 782

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+++  FKR   KE KVAQ  GY+SEH+AYHHGE SLA TI+ +AQDFVGSNN+N
Sbjct: 783  KPGQRKVIWSCFKRKLKKEIKVAQLVGYISEHAAYHHGEASLAQTIINLAQDFVGSNNVN 842

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL PNGQ+GTR+QGGKD AS RYIFT    +TR ++  DDD LL    ED Q IEP +Y+
Sbjct: 843  LLSPNGQYGTRDQGGKDHASPRYIFTEPKAMTRVVYHPDDDPLLKGQREDNQWIEPEFYL 902

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            P+IP VL NG+EGIGTGWS+ IP +NP  IV N+RRL+NGE    M PW+RGF G I  T
Sbjct: 903  PVIPLVLCNGAEGIGTGWSTNIPCFNPAVIVENIRRLMNGEEQVAMKPWWRGFKGEIIAT 962

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII---DQNDSFIRGFRQ 966
            A  +    Y V G+I ++++TT+ I ELPI RWTQ+Y+  LE++I   +  +  I+ +++
Sbjct: 963  AKHK----YDVHGVIHKLDDTTVEITELPIHRWTQNYKADLEAMIAGGENKEGVIKDYKE 1018

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
            + D+  V F + +S + + + +++GL + FKLT+ ++TSNM  FD +G IK+Y++PEQI+
Sbjct: 1019 HHDNANVHFVISMSAKDLEKAEEQGLREFFKLTSKLTTSNMICFDFEGKIKRYESPEQII 1078

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
            E+F+ +RL +Y+KRK      L+  L KL N+ RF+  +V+ ++VV+ R++ D++ +LR+
Sbjct: 1079 EDFYPVRLAYYQKRKDYLAGELQDSLDKLNNQARFVKMIVDKKLVVSGRRKADIVADLRK 1138

Query: 1087 KGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQG 1146
              F P PK SK      A +T + E  E+  +   G  S D+DY+L MAI +LT EK+  
Sbjct: 1139 LDFKPIPKVSK------AKSTQQEENDEDEEQEEAGADS-DFDYMLGMAIWSLTKEKIDR 1191

Query: 1147 LLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            LL        E+  L + TP  LW KDLD
Sbjct: 1192 LLQQAGDKEAELLILLEKTPIDLWNKDLD 1220


>gi|296228227|ref|XP_002759705.1| PREDICTED: DNA topoisomerase 2-beta-like [Callithrix jacchus]
          Length = 1620

 Score = 1192 bits (3083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1199 (52%), Positives = 819/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 45   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 103

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 104  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 163

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 164  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 222

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM KR  DLAG   K VKV  NG ++PV 
Sbjct: 223  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTKRAYDLAGSC-KGVKVMFNGKKLPVN 281

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 282  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 341

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 342  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 401

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 402  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 460

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 461  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 520

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 521  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 558

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 559  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 610

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 611  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 669

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 670  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 729

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 730  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 789

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 790  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 849

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 850  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 909

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 910  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 965

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 966  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1025

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1026 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1085

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   ++T+   ++    +G  S  D++Y+L+M+
Sbjct: 1086 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDTQNQHDDSSSDSGTPSGPDFNYILNMS 1145

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1146 LWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1201


>gi|119473123|ref|XP_001258508.1| DNA topoisomerase II [Neosartorya fischeri NRRL 181]
 gi|119406660|gb|EAW16611.1| DNA topoisomerase II [Neosartorya fischeri NRRL 181]
          Length = 1735

 Score = 1192 bits (3083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/1171 (52%), Positives = 806/1171 (68%), Gaps = 67/1171 (5%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E YQK +QLEHI+ RPDTYIGS+E+ TQ +W+Y+ E + M +R +SYVPGLYKIFDEI+V
Sbjct: 128  EKYQKLTQLEHIIKRPDTYIGSVERTTQFMWVYDSEMEGMKYREVSYVPGLYKIFDEIVV 187

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNKQ D  MD ++V ID+E   ISV N+G G+P+EIH +EG+YVPELIFGHLLTSSN
Sbjct: 188  NAADNKQNDANMDEIRVTIDRESGEISVWNNGRGIPIEIHAKEGIYVPELIFGHLLTSSN 247

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD  +K TGGRNG+GAKL N+FSTEF IET D ++ KKYKQ +TNNM K  +  I+  K
Sbjct: 248  YDDTQQKVTGGRNGFGAKLCNVFSTEFTIETQDSRQKKKYKQTWTNNMSKMGKAKITDAK 307

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
             GD++TKV+FKPD AKF M  ++DD  AL+K+RV DLAG     V V+LNG R+PV++F 
Sbjct: 308  -GDDYTKVTFKPDYAKFGMEGMDDDFEALVKRRVYDLAGTA--KVAVKLNGSRIPVRNFK 364

Query: 269  EYVDMYPKSVTRFHERVNE---------------RWEICVTLSEGQFQQVSFVNGIATIK 313
            +Y++MY K++ R  ER  E                WEI  T+S+G F QVSFVN IAT  
Sbjct: 365  KYMEMYTKAIRR--ERGEEDTNAKDEIITCSPDPHWEIGFTVSDGSFHQVSFVNSIATTS 422

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETL 372
            GGTHV+Y+A+Q+   +   V KKNKN A +K   ++NH+++FVNALI NPAF SQTKE L
Sbjct: 423  GGTHVNYIADQICARLADQVKKKNKNGATLKPAQIRNHIFIFVNALIVNPAFTSQTKEQL 482

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKL 432
            T + S FGSKC L E+F KK+  K+ ++  +L +A  K  + LKK DG +   +    KL
Sbjct: 483  TTKSSQFGSKCTLEEDFYKKIL-KTEVMNNILHFAQAKADQLLKKTDGGRRTRMNN-PKL 540

Query: 433  EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
             DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS  Q+
Sbjct: 541  VDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASFEQI 600

Query: 493  LNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              N EI NIK  LGL+   EY + + LRYGHLMIMTDQ                      
Sbjct: 601  SKNQEIQNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ---------------------- 638

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFY 608
                  DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPIVK    +     K  SF+
Sbjct: 639  ------DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIVKVWKGDPKNPTKQRSFF 692

Query: 609  SMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAI 668
            +MP+YEAWKE    +   W  KYYKGLGTST+++ + YF+++  H K+F    D + E I
Sbjct: 693  TMPEYEAWKEE-HKHERGWEHKYYKGLGTSTTEDAQVYFRDLDRHLKEFHTMQDHETELI 751

Query: 669  ELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
            ELAFSKKK + RK+WL QF+PG  LD   + I Y+DF+NKELILFSMAD QRSIPS+VDG
Sbjct: 752  ELAFSKKKADERKEWLRQFKPGTFLDHSVEKITYTDFINKELILFSMADNQRSIPSVVDG 811

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKPGQRK+L+  F+RN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ FVGSNNI
Sbjct: 812  LKPGQRKVLYTCFRRNLKKDMKVVELAGHVSGMTAYQHGDASLQQTIVGLAQTFVGSNNI 871

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            N L+P+G FG+R QGG+D ASARYI+TRLSP  R +F   DD LL Y  +DG++IEP  Y
Sbjct: 872  NCLEPSGNFGSRLQGGQDCASARYIYTRLSPFARRMFHAADDPLLTYNEDDGKKIEPEVY 931

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            +P++P +L+NG++GIGTGWSS IPNYNP DIV N++RL++ + ++PM PW+RGF G +  
Sbjct: 932  VPVVPLILINGADGIGTGWSSSIPNYNPEDIVDNLKRLMDSQPVKPMQPWFRGFTGEV-- 989

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQ 966
              +   G  +  +GII+E  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ 
Sbjct: 990  --TALGGDRFKFSGIIKETGDKEVEITELPIRTWTQDFKDKLEEIIKAEKTPSFIKDYKD 1047

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
            Y+  T V F + + E+++     EGL +KFKL+ TI+T+N+  FD +G I KY + + IL
Sbjct: 1048 YNTHTKVHFVIQMDEKNIKSAVAEGLEEKFKLSKTIATTNLVAFDPEGRITKYASVDDIL 1107

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
            +EF+ +RL+FYE+RK+ QL  L+ EL KL N+ RF+  +++G++V++ +K+  L+ EL++
Sbjct: 1108 KEFYAVRLKFYERRKQYQLSELQKELDKLTNQARFVQMIIDGDLVISKKKKPVLVAELKK 1167

Query: 1087 KGFTPFPKNSKSIEAVVAG--ATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
             GF  FP   K I+AV AG  A    EE +E+      V S  YDYLL M + +LT E+V
Sbjct: 1168 HGFKAFP---KVIDAVKAGEDAPVVEEEEDESGNDETEVLSSAYDYLLGMPLWSLTHERV 1224

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            + L     +   E+D L K + E +W +DLD
Sbjct: 1225 EKLRRQIGEKEVEMDALIKLSKEDIWKRDLD 1255


>gi|397512028|ref|XP_003826360.1| PREDICTED: DNA topoisomerase 2-beta [Pan paniscus]
          Length = 1618

 Score = 1191 bits (3081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1200 (52%), Positives = 820/1200 (68%), Gaps = 74/1200 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 42   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 100

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 101  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 160

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 161  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 219

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG C G  VKV  NG ++PV
Sbjct: 220  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCRG--VKVMFNGKKLPV 277

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
              F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG 
Sbjct: 278  NGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGR 337

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+
Sbjct: 338  HVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQ 397

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 398  PKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDD 456

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ 
Sbjct: 457  ANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIME 516

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                     
Sbjct: 517  NAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ--------------------- 555

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P
Sbjct: 556  -------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIP 606

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LA
Sbjct: 607  EFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLA 665

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +
Sbjct: 666  FSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNE 725

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 726  RSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 785

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D
Sbjct: 786  QNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDD 845

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y
Sbjct: 846  NQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNY 905

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 906  KNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTD 961

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G 
Sbjct: 962  KTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGC 1021

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR
Sbjct: 1022 LKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENR 1081

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
             + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M
Sbjct: 1082 SKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNM 1141

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            ++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +++  E+
Sbjct: 1142 SLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVESQERED 1198


>gi|157167886|ref|XP_001656143.1| DNA topoisomerase/gyrase [Aedes aegypti]
 gi|108871009|gb|EAT35234.1| AAEL012584-PA, partial [Aedes aegypti]
          Length = 1300

 Score = 1191 bits (3081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1261 (50%), Positives = 834/1261 (66%), Gaps = 92/1261 (7%)

Query: 3    VDKRLPLTTSNNANVVGPTAP----NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQAL 58
             D R      N A   G T+      K+IE++YQKKSQLEHILLRPDTYIGS+E   + +
Sbjct: 2    TDIRAAFAAQNGAPTAGTTSSPKIGGKSIEKIYQKKSQLEHILLRPDTYIGSVEHLKETM 61

Query: 59   WIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHN 118
            WIY+ E K M+ R I+YVPGLYKIFDEILVNAADNKQRD KM A+K+ I+QE + +S+ N
Sbjct: 62   WIYDGELKKMVQREINYVPGLYKIFDEILVNAADNKQRDAKMSAIKIDINQETNTVSIWN 121

Query: 119  SGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
            +G G+PV +H+ E ++VP +IFGHLLTSSNY+D  +K TGGRNGYGAKL NIFST+F +E
Sbjct: 122  NGQGIPVVMHKGEKMFVPTMIFGHLLTSSNYNDEEEKVTGGRNGYGAKLCNIFSTKFTVE 181

Query: 179  TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALM 238
            TA  +  K +KQ + +NM K SEP I +   G+++TK++F PDL KF M  L++D+V LM
Sbjct: 182  TATKQYKKCFKQTWGDNMSKASEPKIKEDYSGEDYTKITFSPDLKKFKMEKLDNDIVGLM 241

Query: 239  KKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPK--------SVTRFHERVNERWE 290
             +R  D+A    + V V LNG ++PVKSF +Y+D+Y K         V   +E  NERWE
Sbjct: 242  SRRAFDVAAST-RGVSVYLNGTKLPVKSFKDYIDLYIKDQQDDIGSQVKVVYENCNERWE 300

Query: 291  ICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKN 349
            + VTLS+  FQQVSFVN IAT KGG HVDY+ + +   ++ V+ KKNK   N+K   VKN
Sbjct: 301  VAVTLSDRGFQQVSFVNSIATTKGGRHVDYITDMIVKQLIEVLKKKNKGGVNIKPFQVKN 360

Query: 350  HLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANF 409
            H+WVF+N LI NP FDSQTKE +TL+  SFGSKC LSE+F+  + +K GIVE++L WA F
Sbjct: 361  HMWVFINCLIVNPTFDSQTKENMTLQAKSFGSKCTLSEKFINNM-SKIGIVESVLQWAKF 419

Query: 410  KQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGR 469
            K   +L K  G+K   V+G+ KLEDAN AG RNS  CTLILTEGDSAK LA++GL VVGR
Sbjct: 420  KAQTELNKASGSKKSKVKGVPKLEDANDAGSRNSLNCTLILTEGDSAKTLAVSGLGVVGR 479

Query: 470  DRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGL---KQGVEYNNVKSLRYGHLMI 526
            D +GVFPLRGKLLNVREA+  Q+L N+EI N+ KI+GL   K+ +  +++K+LRYG LMI
Sbjct: 480  DTYGVFPLRGKLLNVREATHKQILENAEINNLIKIIGLQYKKKYITMDDLKTLRYGKLMI 539

Query: 527  MTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSF 586
            MTDQ                            D DGSHIKGLLINFIH+ WP LL++P F
Sbjct: 540  MTDQ----------------------------DQDGSHIKGLLINFIHTNWPELLRLP-F 570

Query: 587  LVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEY 646
            L EFITPIVKAT KNG+ LSF+S+P++E WK     NA +++IKYYKGLGTSTSKE KEY
Sbjct: 571  LEEFITPIVKATKKNGEELSFFSLPEFEEWKTETP-NAHTYNIKYYKGLGTSTSKEAKEY 629

Query: 647  FQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLL-QFEPGNHLDQ---KEKY--- 699
            FQN+  H+  F ++  QD EAI +AFSKK ++ RK+WL    E   H  Q    E+Y   
Sbjct: 630  FQNMERHRILFKYDSTQDDEAITMAFSKKCVDQRKEWLTSHMEENRHRKQVGLPERYLYT 689

Query: 700  -----IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQF 754
                 I Y +F+N EL+LFS +D  RSIP MVDGLKPGQRK++F  FKRN  +E KVAQ 
Sbjct: 690  KTTKAITYKEFINLELVLFSNSDNIRSIPCMVDGLKPGQRKVMFTCFKRNDKREVKVAQL 749

Query: 755  SGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIF 814
            +G V+E SAYHHGEQSL  TI+ +AQ++VGSNNINLL P+GQFGTR  GGKD+AS RYIF
Sbjct: 750  AGSVAEMSAYHHGEQSLCGTIVNLAQNYVGSNNINLLVPSGQFGTRLAGGKDSASPRYIF 809

Query: 815  TRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNY 874
            T LSP+TR +F   DD LL+Y  +D Q+IEP WY+PIIP VLVNG+EGIGTGWS+ IPN+
Sbjct: 810  TMLSPLTRLIFHPLDDPLLEYQYDDNQKIEPLWYLPIIPMVLVNGTEGIGTGWSTKIPNH 869

Query: 875  NPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRI 934
            NPRDI++N+RR+LNGE  + MHPWY+ F G IE    +     Y   G +  ++   + I
Sbjct: 870  NPRDIISNLRRMLNGEEPKIMHPWYKNFRGEIESVGHQR----YLTVGNVSLLDNQKIEI 925

Query: 935  KELPIRRWTQDYRE-FLESIIDQND---SFIRGFRQYSDDTTVDFEV-FL-SEESMMRTK 988
             ELPI  WTQ Y+E  LE + + +D   + I  +++Y+ DTTV F + FL  E   +  +
Sbjct: 926  SELPIGTWTQTYKENTLEPLANGSDKQKAIISEYKEYNTDTTVRFVISFLPGEYDRIYAE 985

Query: 989  QEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENL 1048
            + G  + FKLT++ISTS+M+ FD K  +K+YD    I  E++ +R+E+Y KRK      L
Sbjct: 986  EGGFHRVFKLTSSISTSSMNAFDDKSYLKRYDHANDIFHEYYKLRIEYYGKRKAYLEGML 1045

Query: 1049 ELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNS---KSIEAVVAG 1105
            + E  +L ++ RFI+   +  +VV N+KR  ++ EL ++G+   P      K    V   
Sbjct: 1046 QAEADRLTDQARFIMEKCDRTLVVENKKRKVMIDELIKRGYRADPVKEWKRKVALDVEEE 1105

Query: 1106 ATDETEESEENPEVVNGVQS---ID-------------YDYLLSMAIGTLTLEKVQGLLA 1149
              +  EE EE  +V  G  S   +D             +DYLL M++  LT E+   LL 
Sbjct: 1106 KEEPEEEEEEGEDVKPGKSSKKPVDPEKAFQKLSDVKKFDYLLGMSMWMLTDERKNELLK 1165

Query: 1150 DRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL---DKSDARAEEERMKIKGNGNGDA 1206
             RD    E+  L+  T E LWV DLDAL  +LDE+   ++ DA + E+++K  G   G  
Sbjct: 1166 QRDAKLSELSSLKAKTLEMLWVDDLDALSKKLDEVEEKERLDAISTEKKLKSGGAAKGGR 1225

Query: 1207 G 1207
            G
Sbjct: 1226 G 1226


>gi|417414445|gb|JAA53515.1| Putative dna topoisomerase type ii, partial [Desmodus rotundus]
          Length = 1639

 Score = 1191 bits (3081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 626/1201 (52%), Positives = 821/1201 (68%), Gaps = 72/1201 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 48   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 106

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 107  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 166

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 167  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 225

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 226  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 284

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 285  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 344

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 345  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 404

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 405  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 463

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 464  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 523

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 524  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 561

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 562  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 613

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 614  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 672

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 673  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 732

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 733  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 792

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LSP+ R LFP  DD LL +L +D 
Sbjct: 793  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARRLFPAVDDNLLKFLYDDN 852

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 853  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 912

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 913  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 968

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 969  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1028

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1029 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKIAIENRS 1088

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +E++   ++    +G  S  D++Y+L+M+
Sbjct: 1089 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEESQNQHDDSSSDSGTPSGPDFNYILNMS 1148

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEER 1195
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+ 
Sbjct: 1149 LWSLTKEKVEELIKQRDSKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQEREDI 1205

Query: 1196 M 1196
            M
Sbjct: 1206 M 1206


>gi|301782147|ref|XP_002926491.1| PREDICTED: DNA topoisomerase 2-beta-like [Ailuropoda melanoleuca]
          Length = 1608

 Score = 1191 bits (3081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1199 (52%), Positives = 820/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 36   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 94

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 95   ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 154

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 155  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 213

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 214  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 272

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 273  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 332

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 333  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 392

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 393  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 451

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 452  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 511

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 512  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 549

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 550  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 601

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 602  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 660

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 661  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 720

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 721  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 780

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS ++R LFP  DD LL +L +D 
Sbjct: 781  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLSRLLFPAVDDNLLKFLYDDN 840

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 841  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 900

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 901  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 956

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 957  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1016

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1017 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1076

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S  D++Y+L+M+
Sbjct: 1077 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPSGPDFNYILNMS 1136

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1137 LWSLTKEKVEELIKQRDSKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1192


>gi|121700316|ref|XP_001268423.1| DNA topoisomerase II [Aspergillus clavatus NRRL 1]
 gi|119396565|gb|EAW06997.1| DNA topoisomerase II [Aspergillus clavatus NRRL 1]
          Length = 1735

 Score = 1191 bits (3080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1178 (51%), Positives = 804/1178 (68%), Gaps = 63/1178 (5%)

Query: 22   APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
            A +    E YQK +QLEHI+ RPDTYIGS+E+ TQ +W+Y   ++ M +R +SYVPGLYK
Sbjct: 121  AKSTNASEKYQKLTQLEHIIKRPDTYIGSVERTTQHMWVYSSTTEGMEYREVSYVPGLYK 180

Query: 82   IFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            IFDEI+VNAADNKQ D KMD ++V +D+E   ISV N+G G+P+EIH +EG+YVPELIFG
Sbjct: 181  IFDEIVVNAADNKQNDAKMDEIRVTVDRESGEISVWNNGRGIPIEIHSKEGIYVPELIFG 240

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            HLLTSSNYDD  +K TGGRNG+GAKL N+FSTEF IET D ++ KKYKQ +T+NM K  +
Sbjct: 241  HLLTSSNYDDTQQKVTGGRNGFGAKLCNVFSTEFTIETQDSRQKKKYKQTWTSNMSKMGK 300

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
              I+  K GD++TKV+FKPD A+F M  ++DD  AL+K+RV DLAG     V V+LNG R
Sbjct: 301  AKITDAK-GDDYTKVTFKPDYARFGMDGMDDDFEALVKRRVYDLAGTA--KVAVKLNGSR 357

Query: 262  VPVKSFAEYVDMYPKSVTRFHERVNE---------------RWEICVTLSEGQFQQVSFV 306
            VP+++F +Y++MY K++ R  ER  E                WE+  T+S+G F QVSFV
Sbjct: 358  VPIRNFKKYMEMYTKAIRR--ERGEEDAGAKDEIITCSPDPHWEVGFTVSDGSFHQVSFV 415

Query: 307  NGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFD 365
            N IAT  GGTHV+Y+A+Q+   +   V KKNKN A +K   ++NH+++FVNALI NPAF 
Sbjct: 416  NSIATTSGGTHVNYIADQICVKLADQVKKKNKNGATLKPAQIRNHIFIFVNALIVNPAFT 475

Query: 366  SQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED 425
            SQTKE LT + S FGSKC L E+F KK+  K+ ++  +L +A  K  + LKK DG +   
Sbjct: 476  SQTKEQLTTKSSQFGSKCVLEEDFYKKIL-KTEVMNNILHFAQAKADQMLKKTDGGRRTR 534

Query: 426  VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
            +    KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR
Sbjct: 535  MNN-PKLVDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVR 593

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
            +AS  Q+  N EI NIK  +GL+   EY + + LRYGHLMIMTD                
Sbjct: 594  DASFEQISKNQEIQNIKNFMGLQHKKEYIDTRGLRYGHLMIMTD---------------- 637

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN---- 601
                        QDHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPI+K    +    
Sbjct: 638  ------------QDHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIIKVWKGDPKNP 685

Query: 602  GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWED 661
             K  SF++MP+YEAWKE   G+   W  KYYKGLGTST+++ + YF+++  H K+F    
Sbjct: 686  TKQRSFFTMPEYEAWKEQ-HGHERGWEHKYYKGLGTSTTEDAQVYFRDLDRHLKEFHTLQ 744

Query: 662  DQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
            D + E IELAFSKKK + RK+WL QF+PG  LD     I Y+DF+NKELILFSMAD QRS
Sbjct: 745  DHETELIELAFSKKKADERKEWLRQFKPGTFLDHSVAKITYTDFINKELILFSMADNQRS 804

Query: 722  IPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQD 781
            IPS++DGLKPGQRK+L+ SF+RN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ 
Sbjct: 805  IPSVIDGLKPGQRKVLYVSFRRNLKKDMKVVELAGHVSGMTAYQHGDASLQQTIVGLAQT 864

Query: 782  FVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQ 841
            FVGSNN+N L+P+G FG+R QGG+D ASARYI+TRLSP  R +F   D+ LL Y  +DG+
Sbjct: 865  FVGSNNVNCLEPSGNFGSRLQGGQDCASARYIYTRLSPFARRMFHPADEPLLTYNVDDGK 924

Query: 842  QIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRG 901
            QIEP  Y+P++P +L+NG++GIGTGWSS IPNYNP DIV N++RL++GE ++PM PW+RG
Sbjct: 925  QIEPENYVPVVPLLLINGADGIGTGWSSSIPNYNPEDIVDNLKRLMDGEPIKPMQPWFRG 984

Query: 902  FGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDS 959
            F G +        G  +  +GII+E  +  + I ELPIR WTQD+++ LE II  D+  S
Sbjct: 985  FNGEVTAI----GGDRFKFSGIIKEAGDKEVEITELPIRTWTQDFKDKLEEIIKADKTPS 1040

Query: 960  FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKY 1019
            FI+ ++ Y+  T V F + + E+ M     EGL +KFKL+ TI+T+N+  FD +G I KY
Sbjct: 1041 FIKDYKDYNTHTKVRFVIQMDEKHMQSALSEGLEEKFKLSKTIATTNLVAFDPEGRITKY 1100

Query: 1020 DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTD 1079
             + + IL+EFF +RL+FYE+RK+ QL  L+ EL KL N+ RF+  +++G +V++ +K+  
Sbjct: 1101 ASVDDILKEFFTVRLKFYERRKQYQLSELQRELDKLSNQARFVQMIIDGALVISKKKKPV 1160

Query: 1080 LLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            L+ EL++KGF   PK + +++A       E  E  E       VQS  YDYLL M++ +L
Sbjct: 1161 LIAELKEKGFKAIPKVADAVKAGEDEPVVEEGEESEE-AEDTEVQSNAYDYLLGMSLWSL 1219

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            T E+V+ L     +   E+D L K + E +W  DLD  
Sbjct: 1220 TQERVEKLRRQIGEREVEIDALIKLSKEDIWKHDLDVF 1257


>gi|385648284|ref|NP_001245315.1| topoisomerase (DNA) II beta 180kDa [Sus scrofa]
          Length = 1614

 Score = 1191 bits (3080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1199 (52%), Positives = 819/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 42   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 100

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 101  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 160

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 161  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 219

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDLAKF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 220  KHFDGEDYTCITFQPDLAKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 278

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 279  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 338

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 339  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 398

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 399  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 457

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 458  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 517

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 518  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 555

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + L+FYS+P+
Sbjct: 556  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELAFYSIPE 607

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 608  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 666

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 667  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 726

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 727  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 786

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 787  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 846

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 847  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 906

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 907  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 962

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 963  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1022

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1023 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1082

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S  D++Y+L+M+
Sbjct: 1083 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPSGPDFNYILNMS 1142

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1143 LWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1198


>gi|426237937|ref|XP_004012914.1| PREDICTED: DNA topoisomerase 2-alpha [Ovis aries]
          Length = 1530

 Score = 1191 bits (3080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1227 (50%), Positives = 828/1227 (67%), Gaps = 82/1227 (6%)

Query: 8    PLTTSNNANVVGPTAPNK------TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIY 61
            PL   N    V  T  N+      ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y
Sbjct: 5    PLQPVNENMQVSKTKKNEDAKKRLSVERIYQKKTQLEHILLRPDTYIGSVESVTQQMWVY 64

Query: 62   EEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGD 121
            +E++  + +R ++YVPGLYKIFDEILVNAADNKQRDPKM  +++ ID E++LIS+ N+G 
Sbjct: 65   DEDT-GINYREVTYVPGLYKIFDEILVNAADNKQRDPKMSCIRITIDPENNLISIWNNGK 123

Query: 122  GVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 181
            G+PV  H+ E +YVP LIFG LLTSSNYDD  KK TGGRNGYGAKL NIFST+F +ETA 
Sbjct: 124  GIPVVEHKVEKMYVPALIFGQLLTSSNYDDEEKKVTGGRNGYGAKLCNIFSTKFTVETAS 183

Query: 182  GKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKR 241
             +  K +KQ + +NMGK  E  + K   G+++T ++F PDL+KF M  L+ D+VALM +R
Sbjct: 184  REYKKMFKQTWMDNMGKAGEMEL-KPFSGEDYTCITFHPDLSKFKMQSLDKDIVALMVRR 242

Query: 242  VVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICV 293
              D+AG   K VKV LNG+R+PVK F  YVD+Y K         +   HE+VN RWE+C+
Sbjct: 243  AYDIAGST-KDVKVYLNGNRLPVKGFRSYVDLYLKDKVDETGNPLKIIHEQVNHRWEVCL 301

Query: 294  TLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLW 352
            T+SE  FQQ+SFVN IAT KGG HVDYVA+Q+   ++ VV KKNK    VKAH VKNH+W
Sbjct: 302  TMSEKGFQQISFVNSIATSKGGRHVDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMW 361

Query: 353  VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS 412
            +FVNALI+NP FDSQTKE +TL+  SFGS C+LSE+F+K      GIVE++L+W  FK  
Sbjct: 362  IFVNALIENPTFDSQTKENMTLQVKSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQ 420

Query: 413  KDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDR 471
              L KK    K   ++GI KL+DAN AGGRNS +CTLILTEGDSAK LA++GL VVGRD+
Sbjct: 421  IQLNKKCSAVKHNRIKGIPKLDDANDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDK 480

Query: 472  FGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMT 528
            +GVFPLRGK+LNVREAS  Q++ N+EI NI KI+GL+    Y   +++K+LRYG +MIMT
Sbjct: 481  YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMT 540

Query: 529  DQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLV 588
            DQ                            D DGSHIKGLLINFIH  WPSLL+   FL 
Sbjct: 541  DQ----------------------------DQDGSHIKGLLINFIHHNWPSLLR-HRFLE 571

Query: 589  EFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQ 648
            EFITPIVK + KN + ++FYS+P++E WK S   N   W +KYYKGLGTSTSKE KEYF 
Sbjct: 572  EFITPIVKVS-KNKQEMAFYSLPEFEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFA 629

Query: 649  NITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHL-DQK 696
            ++  H+  F +   +D  AI LAFSKK+I+ RK+WL  F            P ++L  Q 
Sbjct: 630  DMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQRKLLGLPDDYLYGQA 689

Query: 697  EKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSG 756
              Y+ Y+DF+NKELILFS +D +RSIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G
Sbjct: 690  TTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAG 749

Query: 757  YVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTR 816
             V+E S+YHHGE SL  TI+ +AQ+FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT 
Sbjct: 750  SVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTM 809

Query: 817  LSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNP 876
            LSP+ R LFP  DD  L +L +D Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ 
Sbjct: 810  LSPLARLLFPAKDDHTLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDV 869

Query: 877  RDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKE 936
            R++V N+RRL++GE   PM P Y+ F GTIE+ A  +    Y ++G +  +N TT+ I E
Sbjct: 870  REVVNNIRRLMDGEEPLPMLPSYKNFKGTIEELAPNQ----YVISGEVAILNSTTIEISE 925

Query: 937  LPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGL 992
            LPIR WTQ Y+E  LE ++   ++    I  +R+Y  DTTV F V ++EE +   ++ GL
Sbjct: 926  LPIRTWTQTYKEQVLEPMLNGTEKTPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGL 985

Query: 993  LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
             K FKL T+++ ++M LFD  G +KKYDT   IL +FF +RL++Y  RK+  L  L  E 
Sbjct: 986  HKVFKLQTSLTCNSMVLFDHVGCLKKYDTALDILRDFFELRLKYYGLRKEWLLGMLGAES 1045

Query: 1053 LKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP------KNSKSIEAVVAGA 1106
             KL N+ RFIL  ++G+I++ N+ + +L+  L Q+G+   P         K  +      
Sbjct: 1046 AKLNNQARFILEKIDGKIIIENKPKKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEE 1105

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
            +D  ++SE++    +   +  ++YLL M +  LT EK   L   R++  +E++ L++ +P
Sbjct: 1106 SDNEKQSEKSDSATDSGPT--FNYLLDMPLWYLTKEKKDELCKLRNEKEQELETLKRKSP 1163

Query: 1167 ESLWVKDLDALDMQLDELDKSDARAEE 1193
              LW +DL A   +L+ ++  + + E+
Sbjct: 1164 SDLWKEDLAAFVEELEVVEAKEKQDEQ 1190


>gi|34328148|ref|NP_033435.2| DNA topoisomerase 2-beta [Mus musculus]
 gi|76363529|sp|Q64511.2|TOP2B_MOUSE RecName: Full=DNA topoisomerase 2-beta; AltName: Full=DNA
            topoisomerase II, beta isozyme
 gi|32451610|gb|AAH54541.1| Topoisomerase (DNA) II beta [Mus musculus]
 gi|54887373|gb|AAH41106.1| Topoisomerase (DNA) II beta [Mus musculus]
 gi|148688695|gb|EDL20642.1| topoisomerase (DNA) II beta [Mus musculus]
          Length = 1612

 Score = 1190 bits (3079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1199 (51%), Positives = 819/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 38   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 96

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 97   ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 156

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 157  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 215

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 216  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 274

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 275  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 334

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV + ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 335  VDYVVDQVVSKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 394

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 395  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 453

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 454  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 513

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 514  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 551

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 552  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 603

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 604  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 662

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 663  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 722

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 723  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 782

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 783  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 842

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L G    PM P Y+
Sbjct: 843  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLEGLDPHPMLPNYK 902

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 903  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 958

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 959  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1018

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1019 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1078

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   ++++   ++    +G  S  D++Y+L+M+
Sbjct: 1079 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDSQNQHDDSSSDSGTPSGPDFNYILNMS 1138

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1139 LWSLTKEKVEELIKQRDTKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1194


>gi|392861752|gb|EAS31980.2| DNA topoisomerase 2 [Coccidioides immitis RS]
          Length = 1718

 Score = 1190 bits (3079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 655/1394 (46%), Positives = 886/1394 (63%), Gaps = 123/1394 (8%)

Query: 8    PLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT 67
            PL+T  N +V    +  K+ ++ YQK SQ+EHI+ RPDTYIGSIE+  Q +W+Y   +  
Sbjct: 115  PLSTVQNESVTNEASSGKSSDQ-YQKLSQVEHIIKRPDTYIGSIERTQQNMWVYNSTTDQ 173

Query: 68   MIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEI 127
            M +R +SYVPGLYKIFDEILVNAADNKQRD  M  +KV +D E   ISV N+G G+PVEI
Sbjct: 174  MEYREVSYVPGLYKIFDEILVNAADNKQRDNNMSEIKVTLDMEAGEISVWNNGRGIPVEI 233

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
            H +E +Y+PELIFGHLLTSSNYDD   K TGGRNGYGAKL NIFSTEF +ETAD +  KK
Sbjct: 234  HSKEKIYIPELIFGHLLTSSNYDDEQAKVTGGRNGYGAKLCNIFSTEFTVETADSRSKKK 293

Query: 188  YKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
            Y+Q + +NM K  +  I++ K G+++TK++FKPD  KF M  ++ D  AL+K+RV DLAG
Sbjct: 294  YRQTWQDNMSKMRKAKITESK-GNDYTKITFKPDFKKFGMEGMDADFEALVKRRVYDLAG 352

Query: 248  CLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE---------------RWEIC 292
                 V V LNG R+P+ +F +Y++MY K++ R  ER  E               RWEI 
Sbjct: 353  TC--RVTVRLNGSRIPISNFKKYMEMYTKAIKR--ERGEEAASDKSEIVTDSTEPRWEIG 408

Query: 293  VTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANV-KAHNVKNHL 351
              +S+G FQQVSFVN IAT  GGTHV+Y+++Q+ + +   V KKNK   + K   ++NH+
Sbjct: 409  FAVSDGSFQQVSFVNSIATTSGGTHVNYISDQICSKLADAVKKKNKTGPLLKPAQIRNHI 468

Query: 352  WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQ 411
            ++FVN LI NPAF SQTKE LT +QS FGSKC LSEEFLKK+  K+ +++ ++ +A  K 
Sbjct: 469  FLFVNCLIVNPAFTSQTKEQLTTKQSQFGSKCVLSEEFLKKIL-KTQVMQNIMHFAEQKA 527

Query: 412  SKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDR 471
             + LKK DG++   +    KL DAN AG +    CTLILTEGDSAK LAMAG +VVG D 
Sbjct: 528  DQILKKTDGSRRARMNN-PKLTDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDL 586

Query: 472  FGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQV 531
            FGVFPLRGKLLNVR+AS +Q+  N EI NIK  LGL+   EY + + LRYGHLMIMTDQ 
Sbjct: 587  FGVFPLRGKLLNVRDASVDQISKNQEIQNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ- 645

Query: 532  LLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI 591
                                       DHDGSHIKGLLIN++   +PSLLKIP FL+EFI
Sbjct: 646  ---------------------------DHDGSHIKGLLINYLQVAFPSLLKIPGFLIEFI 678

Query: 592  TPIVKATNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYF 647
            TPIVK    + K      SF+++P+YE WK+S G +   W  KYYKGLGTS++++ + YF
Sbjct: 679  TPIVKVWKGDPKNPTASKSFFTLPEYEEWKKSHGHD-RRWDKKYYKGLGTSSTEDAEVYF 737

Query: 648  QNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVN 707
            +++  H K+F    D + + I+LAFSKKK + RK+WL QF+PG +LD     I Y+DF+N
Sbjct: 738  RDLDRHLKEFHAMQDNEAQLIDLAFSKKKADDRKEWLRQFKPGTYLDHSVDKITYTDFIN 797

Query: 708  KELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHG 767
            KELILFSMAD  RSIPS+VDGLKPGQRK+L+  FKRN  K+ KV +  GYVS  +AY HG
Sbjct: 798  KELILFSMADNIRSIPSVVDGLKPGQRKVLYAMFKRNVKKDMKVVELGGYVSGMTAYQHG 857

Query: 768  EQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPK 827
            E SL  TI+G+AQ FVGSNN+N L+P+G FG+R QGG D ASARYI TRLSP  R +F  
Sbjct: 858  EASLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRLQGGSDCASARYIHTRLSPFARRIFHA 917

Query: 828  DDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL 887
             D+ LL    +DG+ IEP  Y+P++P +L+NG++GIGTGWS+ IPN+NP DIVAN+RRL+
Sbjct: 918  ADEPLLKSNIDDGKVIEPEVYVPVVPMILINGADGIGTGWSTSIPNFNPEDIVANLRRLM 977

Query: 888  NGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYR 947
            +GE + PM PW+RGF G +  TAS   G  Y  +GII++  +  + I ELPIR WTQD++
Sbjct: 978  DGESLVPMKPWFRGFTGEV--TAS---GDRYKFSGIIKQTGDCEVEITELPIRTWTQDFK 1032

Query: 948  EFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTS 1005
            + LE II  ++  SFI+ ++ Y+  + V F + + E+ M +  ++GL ++FKL+ TI+T+
Sbjct: 1033 DKLEEIIKAEKAPSFIKDYKDYNTHSKVHFIIQMDEKHMKKALEDGLEERFKLSKTIATT 1092

Query: 1006 NMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGV 1065
            NM  FD++G I KYDT E IL+ F+ +R+ FYEKRK+  L  L  EL K  N+ RF+  +
Sbjct: 1093 NMVAFDAEGRITKYDTAEDILKAFYAVRIRFYEKRKQHLLAQLHKELDKFTNQARFVQMI 1152

Query: 1066 VNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS 1125
            ++G++V++ +++  L+ EL++KGF P P   K+++A   G  +   E EE  E    + S
Sbjct: 1153 IDGKLVISKKRKAKLIEELKEKGFKPIP---KAVDAAKEGENEPAVEEEEESEEDEQLSS 1209

Query: 1126 IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL-DEL 1184
              +DYLL M + +LT E+V+ LL        E+D L K + E LW +DLD    +  ++L
Sbjct: 1210 DVFDYLLGMPLWSLTQERVEKLLRQIGDKELEIDALIKLSKEDLWKRDLDEFITEWRNQL 1269

Query: 1185 DKSDARAEEER-------MKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNA-RATEAMG 1236
            +  + RA++ R        K+K  G G AG K       + A  +D  S+ A +A +A  
Sbjct: 1270 EDEERRAKKARSYGRRTSTKLKTAGRGPAGKK-------RKALGDDDDSDFAPKAKKA-- 1320

Query: 1237 EMDNVTKVVKPKG--------RAGLKKAPAEKLDDDEEDE------VPDLKQRLAKLNEQ 1282
                V   VKPKG         A   K  A +LD   E E      +P  K R A   + 
Sbjct: 1321 ---TVVNKVKPKGGLLDYLSKPAAKSKTKATRLDSTSETEDFEAEVIPQKKSRAASNKKP 1377

Query: 1283 LASTKL---EPSPDQSGVM--ET-EKVQVPAK---------------KKEPSKRTAAQKK 1321
             A+T     +   D+  ++  ET EK + PA+               K +P+K+  A  K
Sbjct: 1378 EAATTFAFSDSEDDKDDILSKETDEKAREPARPPSPDIPAISDSDDYKPKPAKKATAVSK 1437

Query: 1322 VVTVETSDSEDEII 1335
                E  DS+ EI+
Sbjct: 1438 KAPKEHDDSDIEIV 1451


>gi|3869382|gb|AAC77432.1| DNA topoisomerase II beta [Homo sapiens]
          Length = 1598

 Score = 1190 bits (3078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1200 (52%), Positives = 820/1200 (68%), Gaps = 74/1200 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 22   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 80

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 81   ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 140

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 141  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 199

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG C G  VKV  NG ++PV
Sbjct: 200  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCRG--VKVMFNGKKLPV 257

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
              F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG 
Sbjct: 258  NGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGR 317

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+
Sbjct: 318  HVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQ 377

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 378  PKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDD 436

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ 
Sbjct: 437  ANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIME 496

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                     
Sbjct: 497  NAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ--------------------- 535

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P
Sbjct: 536  -------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIP 586

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LA
Sbjct: 587  EFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLA 645

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +
Sbjct: 646  FSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNE 705

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 706  RSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 765

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D
Sbjct: 766  QNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDD 825

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y
Sbjct: 826  NQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNY 885

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 886  KNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTD 941

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  + I  +++Y  DTTV+  V ++EE + + +  GL K FKL TT++ ++M LFD  G 
Sbjct: 942  KTPALISDYKEYHTDTTVNSVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGC 1001

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR
Sbjct: 1002 LKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENR 1061

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
             + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M
Sbjct: 1062 SKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNM 1121

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            ++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +++  E+
Sbjct: 1122 SLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVESQERED 1178


>gi|1066004|dbj|BAA07236.1| typr II DNA topoisomerase beta isoform [Mus musculus]
          Length = 1612

 Score = 1190 bits (3078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1199 (51%), Positives = 819/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 38   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 96

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 97   ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 156

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 157  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 215

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 216  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 274

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 275  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 334

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV + ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 335  VDYVVDQVVSKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 394

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 395  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 453

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 454  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 513

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 514  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 551

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 552  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 603

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 604  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 662

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 663  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 722

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 723  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 782

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 783  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 842

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L G    PM P Y+
Sbjct: 843  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLEGLDPHPMLPNYK 902

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 903  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 958

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 959  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1018

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1019 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1078

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   ++++   ++    +G  S  D++Y+L+M+
Sbjct: 1079 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDSQNQHDDSSSDSGTPSGPDFNYILNMS 1138

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1139 LWSLTKEKVEELIKQRDTKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1194


>gi|146182234|ref|XP_001024182.2| DNA gyrase/topoisomerase IV, A subunit family protein [Tetrahymena
            thermophila]
 gi|146143912|gb|EAS03937.2| DNA gyrase/topoisomerase IV, A subunit family protein [Tetrahymena
            thermophila SB210]
          Length = 1680

 Score = 1190 bits (3078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/1218 (50%), Positives = 813/1218 (66%), Gaps = 75/1218 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E  YQKK+QLEHILLRPDTY+GS E   + +W+  ++  +  +R I YVP LYKIFDE
Sbjct: 2    SVETTYQKKTQLEHILLRPDTYVGSNEYQDEQMWVLADDGSSFENRQIKYVPALYKIFDE 61

Query: 86   ILVNAADN------------------KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEI 127
            ILVNAADN                  KQRD +M  + V+IDQ+++ IS+ N G G+PV+I
Sbjct: 62   ILVNAADNYQSDLMIDRKQTNTFQFYKQRDKRMKRLDVIIDQKNNCISILNDGKGIPVQI 121

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
            H+E  +YVPELIFGHLLTSSNY+D  KK  GGRNG+GAKLTNIFST+FI+E+AD K  KK
Sbjct: 122  HKEYNIYVPELIFGHLLTSSNYNDEEKKVVGGRNGFGAKLTNIFSTKFIVESADSKNKKK 181

Query: 188  YKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
            ++  +T NM ++SEP IS   E D +TK++F PDL KF+M  LE D+V LMKKRV D+AG
Sbjct: 182  FQMTWTKNMSEQSEPQISSYTESD-YTKITFYPDLKKFHMKELEKDIVDLMKKRVYDMAG 240

Query: 248  CLGKSVKVELNGHRVPVKSFAEYVDMYPKS-------VTRFHERVNERWEICVTLSEGQF 300
             +G SVKV LNG R+ + SF++Y D Y K+       V+      N+RWE+  +LSEGQF
Sbjct: 241  VIGGSVKVSLNGERISISSFSDYCDFYLKNQGAEVIKVSDNKGTNNQRWEVIASLSEGQF 300

Query: 301  QQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALID 360
            QQVSFVN I T KGGTHV+Y+ +Q+   +M  + KK K+ N+K   VK+HLW+FVN LI+
Sbjct: 301  QQVSFVNSICTSKGGTHVNYITDQITEKLMETLKKKEKSLNIKQFQVKSHLWIFVNCLIE 360

Query: 361  NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFK-QSKDLKKND 419
            NP+FD+QTKETLTLRQ SFGS CE+SE+F+K++  KS I+  +L  A  K Q+K  K   
Sbjct: 361  NPSFDTQTKETLTLRQQSFGSTCEVSEKFIKEL-LKSNIINHILLQARAKEQAKMAKTLS 419

Query: 420  GTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRG 479
              K   + G+ KLEDAN AG RN+E CTLI+TEGDSAKALAM+G+ VVGRD+FGVFPL+G
Sbjct: 420  AKKQSRLLGVPKLEDANDAGTRNAESCTLIITEGDSAKALAMSGIEVVGRDKFGVFPLKG 479

Query: 480  KLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFL 539
            K+LNVR+++S Q+  N EI NI K++G+K    Y+NVKSLRYG +MIM DQ         
Sbjct: 480  KMLNVRDSTSKQITENLEIQNIIKVMGMKLNTNYDNVKSLRYGSIMIMADQ--------- 530

Query: 540  LWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATN 599
                               DHDGSHIKGL INFI +FWPSL ++  FL EFITPIVK   
Sbjct: 531  -------------------DHDGSHIKGLFINFIQNFWPSLFQMDGFLKEFITPIVKV-R 570

Query: 600  KNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
            K  + +SF+S+ D++ WK S   N   W IKYYKGLGTST +E +EYF NI  H   F +
Sbjct: 571  KGNQSISFFSIQDFKRWK-STCPNQHLWKIKYYKGLGTSTDQEAQEYFGNINKHVISFKY 629

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
                D +AI+LAF+KK+ E RKKWL++++P  ++D  +K++ Y DFVNKELI FS +D  
Sbjct: 630  NGKDDEDAIDLAFNKKRAEDRKKWLVKYDPEENVDHSQKHLTYKDFVNKELINFSNSDNA 689

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+ DGLKPGQRKILF  FKRN   E KVAQ SGYV+EHSAYHHGEQSL STI+GMA
Sbjct: 690  RSIPSLCDGLKPGQRKILFACFKRNLKNEIKVAQLSGYVAEHSAYHHGEQSLESTIVGMA 749

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q FVG+NNIN L P GQFG+RN GGK+AASARYI T L+ ITR +FP+ DD +L YL ++
Sbjct: 750  QSFVGTNNINYLMPIGQFGSRNMGGKEAASARYIHTCLNKITRCVFPEPDDHILYYLEDE 809

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
            GQQ+EP +Y+PIIPT L+NG++GIGTGWS+ IP YNPR++V ++ + + G     + PWY
Sbjct: 810  GQQVEPIYYLPIIPTALLNGADGIGTGWSTSIPCYNPRELVDSIEKRMMGVPFTDLLPWY 869

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN-- 957
            +GF G I    S       TV+G    VNETT+ I ELPI++W +DY+ FLE  ++    
Sbjct: 870  KGFTGEI----SNNEKSQITVSGKYHLVNETTIEITELPIKKWIRDYKNFLEEKLESTKD 925

Query: 958  -DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
             D  I   ++Y     V F V +SE+ M + ++EG+ K FKL +TI T+NM LF+ +G +
Sbjct: 926  KDPEIEDIKEYHAGNRVHFVVKMSEKQMEKVQREGIDKYFKLQSTIPTTNMVLFNHEGKL 985

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
             +Y    +I+EEF+ +RL  Y++RK+  +  +E +L  L NK RFIL V+N  I V N K
Sbjct: 986  TRYANICEIMEEFYEVRLNAYKRRKEYLVSKIERDLEILSNKKRFILAVINESIRVRNAK 1045

Query: 1077 RTDLLLELRQKGFT-----PFPKNSKSIEAVVAGATDETEES--EENPEVVNGVQSIDYD 1129
            R DL+ EL  +G+      P  K+SK    +      ++ E   E NP   N + + +Y+
Sbjct: 1046 RKDLIKELSVQGYVQMKDMPKIKSSKLTSQLEQEQNQDSNEENFETNP---NEINAKEYN 1102

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            YLLS+ + +LT EKV+ +  ++    +E+D L       +W +DL      LD++++ + 
Sbjct: 1103 YLLSLPMWSLTYEKVEEIKQEQKNKQDELDKLVATEVIDIWKEDLKNFIECLDQIEEEED 1162

Query: 1190 RAEEERMKIKGNGNGDAG 1207
                +RMK + N     G
Sbjct: 1163 EEMRKRMKKQSNSKVKQG 1180


>gi|358422132|ref|XP_001254710.4| PREDICTED: DNA topoisomerase 2-beta [Bos taurus]
          Length = 1908

 Score = 1189 bits (3077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1199 (52%), Positives = 818/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 48   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 106

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 107  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 166

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 167  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 225

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 226  KHFDGEDYTCITFQPDLSKFKMEKLDRDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 284

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 285  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 344

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 345  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 404

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 405  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 463

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 464  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 523

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 524  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 561

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 562  ------DQDGSHIKGLLINFIHHNWPSLLKH-GFLEEFITPIVKAS-KNKQELSFYSIPE 613

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 614  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 672

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 673  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 732

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 733  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 792

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 793  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDDN 852

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 853  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 912

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 913  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 968

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 969  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1028

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1029 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1088

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +E++   ++    +G  S  D++Y+L+M+
Sbjct: 1089 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEESQNQHDDSSSDSGTPSGPDFNYILNMS 1148

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1149 LWSLTKEKVEELIKQRDAKGREVSDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1204


>gi|119584763|gb|EAW64359.1| topoisomerase (DNA) II beta 180kDa, isoform CRA_c [Homo sapiens]
          Length = 1626

 Score = 1189 bits (3077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1188 (52%), Positives = 812/1188 (68%), Gaps = 71/1188 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 50   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 108

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 109  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 168

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 169  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 227

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG C G  VKV  NG ++PV
Sbjct: 228  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCRG--VKVMFNGKKLPV 285

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
              F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG 
Sbjct: 286  NGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGR 345

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+
Sbjct: 346  HVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQ 405

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 406  PKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDD 464

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ 
Sbjct: 465  ANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIME 524

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                     
Sbjct: 525  NAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ--------------------- 563

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P
Sbjct: 564  -------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIP 614

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LA
Sbjct: 615  EFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLA 673

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +
Sbjct: 674  FSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNE 733

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 734  RSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 793

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D
Sbjct: 794  QNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDD 853

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y
Sbjct: 854  NQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNY 913

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 914  KNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTD 969

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G 
Sbjct: 970  KTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGC 1029

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR
Sbjct: 1030 LKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENR 1089

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
             + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M
Sbjct: 1090 SKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNM 1149

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
            ++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A   +LD
Sbjct: 1150 SLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAFVEELD 1197


>gi|395532490|ref|XP_003768303.1| PREDICTED: DNA topoisomerase 2-alpha isoform 1 [Sarcophilus harrisii]
          Length = 1561

 Score = 1189 bits (3077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1203 (52%), Positives = 824/1203 (68%), Gaps = 74/1203 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+EE   + +R +++VPGLYKIFDE
Sbjct: 34   SVERIYQKKTQLEHILLRPDTYIGSVEVVTQQMWVYDEEV-GLNYRDVTFVPGLYKIFDE 92

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM+ +KV ID E++ IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 93   ILVNAADNKQRDPKMNCIKVTIDSENNTISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 152

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST F +ETA  +  K +KQ + +NMGK  E  + 
Sbjct: 153  SSNYDDDEKKVTGGRNGYGAKLCNIFSTRFTVETACKEYKKLFKQTWRDNMGKAGEMTL- 211

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF MT+L+ D+VALM +R  D+AG   K VKV LNG+R+PVK
Sbjct: 212  KPFSGEDYTCITFQPDLSKFKMTNLDKDIVALMSRRAYDIAGST-KDVKVFLNGNRLPVK 270

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K         +   HE VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 271  GFRSYVDLYVKDKLDETGNPLKIIHEEVNNRWEVCLTMSEKGFQQISFVNSIATSKGGRH 330

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+ + ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 331  VDYVADQIISRLIDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 390

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKCELSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 391  KSFGSKCELSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 449

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG +NS  CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 450  NDAGSKNSTDCTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 509

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++KSLRYG +MIMTDQ                      
Sbjct: 510  AEINNIIKIVGLQYKKNYEDADSLKSLRYGKIMIMTDQ---------------------- 547

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + +N + LSFYS+P+
Sbjct: 548  ------DQDGSHIKGLLINFIHHNWPSLLR-HCFLEEFITPIVKVS-RNKQELSFYSLPE 599

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF +++ H+  F +   +D  AI LAF
Sbjct: 600  FEEWKNSTE-NHKKWKVKYYKGLGTSTSKEAKEYFSDMSRHRIQFKYSGPEDDAAISLAF 658

Query: 673  SKKKIEARKKWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  K  K++ Y+DF+NKELILFS +D +R
Sbjct: 659  SKKQIDDRKEWLTHFMEDRRQRKLLGLPEDYLYGKATKHLTYNDFINKELILFSNSDNER 718

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 719  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 778

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD+ L +L +D 
Sbjct: 779  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPAKDDQTLKFLYDDN 838

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRL++GE   PM P Y+
Sbjct: 839  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLMDGEEPLPMLPSYK 898

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++ A  +    Y ++G +  +N TT+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 899  NFKGTIDELAPNQ----YIISGEVSILNSTTIEISELPVRTWTQVYKEQVLEPMLNGTDK 954

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE + + +  GL K FKL T ++ ++M LFD  G +
Sbjct: 955  TPPLITDYREYHTDTTVKFIVKMTEEKLAQAEHAGLHKVFKLQTNLTCNSMVLFDHVGCL 1014

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL++FF +RL++Y  RK+     L  E  +L N+ RFIL  + G+IV+ N+ 
Sbjct: 1015 KKYDTALDILKDFFDLRLKYYGLRKEWLTGMLGAESARLNNQARFILEKIEGKIVIENKP 1074

Query: 1077 RTDLLLELRQKGFTPFP-KNSKSIEAVVAG-ATDETEESEENPEVVNGVQSID----YDY 1130
            + +L+  L Q+G+   P K  K  +    G   DE EESE   E   G  + D    ++Y
Sbjct: 1075 KKELIKVLIQRGYDSDPVKAWKEAQQKSPGDNEDENEESENEKETEKGDSATDSGPTFNY 1134

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R +  +E++ L++ +P  LW +DL A   +L+ ++  + R
Sbjct: 1135 LLDMPLWYLTKEKKDELCRQRTEKEQELETLKRKSPSDLWREDLAAFVEELEVVEAKEKR 1194

Query: 1191 AEE 1193
             E+
Sbjct: 1195 DEQ 1197


>gi|345788922|ref|XP_534241.3| PREDICTED: DNA topoisomerase 2-beta [Canis lupus familiaris]
          Length = 1644

 Score = 1189 bits (3077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1199 (52%), Positives = 820/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 71   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 129

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 130  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 189

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 190  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 248

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 249  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 307

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 308  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 367

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 368  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 427

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 428  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 486

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 487  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 546

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 547  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 584

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 585  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 636

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 637  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 695

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 696  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 755

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 756  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 815

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS ++R LFP  DD LL +L +D 
Sbjct: 816  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLSRLLFPAVDDNLLKFLYDDN 875

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 876  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 935

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 936  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 991

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 992  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1051

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1052 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1111

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S  D++Y+L+M+
Sbjct: 1112 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPSGPDFNYILNMS 1171

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1172 LWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1227


>gi|409083318|gb|EKM83675.1| hypothetical protein AGABI1DRAFT_117173 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1549

 Score = 1189 bits (3077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/1169 (51%), Positives = 794/1169 (67%), Gaps = 62/1169 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            T+ E Y K SQ EHIL RPD+YIGSIE  TQ +W ++  SK M+ R + YVPG  KI DE
Sbjct: 93   TVSETYTKLSQHEHILKRPDSYIGSIETITQPMWTFDAGSKRMVQRDVKYVPGFLKIVDE 152

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNK  D  MD +KV ID E + ISV+N+G G+PVEIH +E +Y+PELIFGHLL+
Sbjct: 153  ILVNAADNKINDTSMDTIKVNIDVEENTISVYNNGRGIPVEIHSKEKIYIPELIFGHLLS 212

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NI+S EF +ETAD    +KYKQ++T NM    +  I+
Sbjct: 213  SSNYDDDEKKLTGGRNGYGAKLANIYSHEFTVETADKNTDQKYKQIWTENMTNCGKAKIT 272

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+ WT+++FKPDL +F M  +++D  +L++KRV D+AG + + VKV LN  R+ +K
Sbjct: 273  KNSKGEEWTRITFKPDLQRFGMDSIDEDTASLLRKRVYDVAGTV-RDVKVYLNDERLKIK 331

Query: 266  SFAEYVDMYPKSVTR----------------FHERVNERWEICVTLSEGQFQQVSFVNGI 309
            +F +YV+MY  SV                   +ER++ERWEI  T+S+G FQ V+F N I
Sbjct: 332  NFKQYVEMYVDSVQAEAAEASGGAAQPKSQVIYERLSERWEIAFTVSDGSFQHVAFANSI 391

Query: 310  ATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTK 369
            +TIKGGTHV+Y+A+ ++ H+M  V+KKNK A VK   ++NH+W+FVNALI+NP FD QTK
Sbjct: 392  STIKGGTHVNYIADHLSKHIMTAVSKKNKGAPVKPFQIRNHMWLFVNALIENPMFDGQTK 451

Query: 370  ETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGI 429
            ETLTL  S FGSK  + E+F+KKV  K+ IV+ +L WA  K  + +KK DG+K   + G+
Sbjct: 452  ETLTLPSSKFGSKPTIKEDFIKKVL-KTAIVDNVLHWAKAKADQQIKKTDGSKRNRLVGL 510

Query: 430  SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS 489
            +KL DAN AG R ++ CTLILTEGDSAKALA+AGL VVGRD FGVFPLRGKLLNVREA  
Sbjct: 511  TKLSDANNAGTRLAKDCTLILTEGDSAKALAVAGLGVVGRDYFGVFPLRGKLLNVREAKH 570

Query: 490  NQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
            +Q++ N EI NIKKILGL+   +Y++V SLRYG LMIM DQ                   
Sbjct: 571  DQIMKNEEIQNIKKILGLQHNKDYSDVSSLRYGRLMIMADQ------------------- 611

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYS 609
                     DHDGSHIKGLLINF   F+PSLLK+P FLVEF+TPIV+   K      F++
Sbjct: 612  ---------DHDGSHIKGLLINFFDHFYPSLLKLPEFLVEFVTPIVRII-KGKHRRDFFT 661

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            +P+YE W      +A  W  KYYKGLGTS   + ++YF ++  H   F      D + I+
Sbjct: 662  LPEYEKWLLE-APDAHKWESKYYKGLGTSNDADARDYFSHMAKHMIPFAPTQHGDRDLID 720

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKKK + RK+WL QF PG  LD   + I YS+F+NKELI FSMAD  RSIP + DGL
Sbjct: 721  LAFSKKKADDRKEWLRQFRPGTFLDHNLEEIPYSEFINKELICFSMADNIRSIPCVADGL 780

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+++  FKR   KE KVAQ  GY+SEH+AYHHGE SLA TI+ +AQDFVGSNN+N
Sbjct: 781  KPGQRKVIWSCFKRKLKKEIKVAQLVGYISEHAAYHHGEASLAQTIINLAQDFVGSNNVN 840

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL PNGQ+GTR+QGGKD AS RYIFT    +TR ++  DDD LL    ED Q IEP +Y+
Sbjct: 841  LLSPNGQYGTRDQGGKDHASPRYIFTEPKAMTRVVYHPDDDPLLKGQREDNQWIEPEFYL 900

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            P+IP VL NG+EGIGTGWS+ IP +NP  IV N+RRL+NGE    M PW+RGF G I  T
Sbjct: 901  PVIPLVLCNGAEGIGTGWSTNIPCFNPAVIVENIRRLMNGEEQVAMKPWWRGFKGEIIAT 960

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII---DQNDSFIRGFRQ 966
            A  +    Y V G+I ++++TT+ I ELPI RWTQ+Y+  LE++I   +  +  I+ +++
Sbjct: 961  AKHK----YDVHGVIHKLDDTTVEITELPIHRWTQNYKADLEAMIAGGENKEGVIKDYKE 1016

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
            + D+  V F + +S + + + +++GL + FKLT+ ++TSNM  FD +G IK+Y++PEQI+
Sbjct: 1017 HHDNANVHFVISMSAKDLEKAEEQGLREFFKLTSKLTTSNMICFDFEGKIKRYESPEQII 1076

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
            E+F+ +RL +Y+KRK      L+  L KL N+ RF+  +V+ ++VV+ R++ D++ +LR+
Sbjct: 1077 EDFYPVRLAYYQKRKDYLAGELQDSLDKLNNQARFVKMIVDKKLVVSGRRKADIVADLRK 1136

Query: 1087 KGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQG 1146
              F P PK SK      A +T + E  E+  +   G  S D+DY+L MAI +LT EK+  
Sbjct: 1137 LDFKPIPKISK------AKSTQQEENDEDEEQEEAGADS-DFDYMLGMAIWSLTKEKIDR 1189

Query: 1147 LLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            LL        E+  L + TP  LW KDLD
Sbjct: 1190 LLQQAGDKEAELLILLEKTPIDLWNKDLD 1218


>gi|119196923|ref|XP_001249065.1| hypothetical protein CIMG_02836 [Coccidioides immitis RS]
          Length = 1635

 Score = 1189 bits (3077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 656/1394 (47%), Positives = 886/1394 (63%), Gaps = 123/1394 (8%)

Query: 8    PLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT 67
            PL+T  N +V    +  K+ ++ YQK SQ+EHI+ RPDTYIGSIE+  Q +W+Y   +  
Sbjct: 32   PLSTVQNESVTNEASSGKSSDQ-YQKLSQVEHIIKRPDTYIGSIERTQQNMWVYNSTTDQ 90

Query: 68   MIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEI 127
            M +R +SYVPGLYKIFDEILVNAADNKQRD  M  +KV +D E   ISV N+G G+PVEI
Sbjct: 91   MEYREVSYVPGLYKIFDEILVNAADNKQRDNNMSEIKVTLDMEAGEISVWNNGRGIPVEI 150

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
            H +E +Y+PELIFGHLLTSSNYDD   K TGGRNGYGAKL NIFSTEF +ETAD +  KK
Sbjct: 151  HSKEKIYIPELIFGHLLTSSNYDDEQAKVTGGRNGYGAKLCNIFSTEFTVETADSRSKKK 210

Query: 188  YKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
            Y+Q + +NM K  +  I++ K G+++TK++FKPD  KF M  ++ D  AL+K+RV DLAG
Sbjct: 211  YRQTWQDNMSKMRKAKITESK-GNDYTKITFKPDFKKFGMEGMDADFEALVKRRVYDLAG 269

Query: 248  CLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE---------------RWEIC 292
                 V V LNG R+P+ +F +Y++MY K++ R  ER  E               RWEI 
Sbjct: 270  TC--RVTVRLNGSRIPISNFKKYMEMYTKAIKR--ERGEEAASDKSEIVTDSTEPRWEIG 325

Query: 293  VTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANV-KAHNVKNHL 351
              +S+G FQQVSFVN IAT  GGTHV+Y+++Q+ + +   V KKNK   + K   ++NH+
Sbjct: 326  FAVSDGSFQQVSFVNSIATTSGGTHVNYISDQICSKLADAVKKKNKTGPLLKPAQIRNHI 385

Query: 352  WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQ 411
            ++FVN LI NPAF SQTKE LT +QS FGSKC LSEEFLKK+  K+ +++ ++ +A  K 
Sbjct: 386  FLFVNCLIVNPAFTSQTKEQLTTKQSQFGSKCVLSEEFLKKIL-KTQVMQNIMHFAEQKA 444

Query: 412  SKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDR 471
             + LKK DG++   +    KL DAN AG +    CTLILTEGDSAK LAMAG +VVG D 
Sbjct: 445  DQILKKTDGSRRARMNN-PKLTDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDL 503

Query: 472  FGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQV 531
            FGVFPLRGKLLNVR+AS +Q+  N EI NIK  LGL+   EY + + LRYGHLMIMTDQ 
Sbjct: 504  FGVFPLRGKLLNVRDASVDQISKNQEIQNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ- 562

Query: 532  LLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI 591
                                       DHDGSHIKGLLIN++   +PSLLKIP FL+EFI
Sbjct: 563  ---------------------------DHDGSHIKGLLINYLQVAFPSLLKIPGFLIEFI 595

Query: 592  TPIVKATNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYF 647
            TPIVK    + K      SF+++P+YE WK+S G +   W  KYYKGLGTS++++ + YF
Sbjct: 596  TPIVKVWKGDPKNPTASKSFFTLPEYEEWKKSHGHD-RRWDKKYYKGLGTSSTEDAEVYF 654

Query: 648  QNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVN 707
            +++  H K+F    D + + I+LAFSKKK + RK+WL QF+PG +LD     I Y+DF+N
Sbjct: 655  RDLDRHLKEFHAMQDNEAQLIDLAFSKKKADDRKEWLRQFKPGTYLDHSVDKITYTDFIN 714

Query: 708  KELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHG 767
            KELILFSMAD  RSIPS+VDGLKPGQRK+L+  FKRN  K+ KV +  GYVS  +AY HG
Sbjct: 715  KELILFSMADNIRSIPSVVDGLKPGQRKVLYAMFKRNVKKDMKVVELGGYVSGMTAYQHG 774

Query: 768  EQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPK 827
            E SL  TI+G+AQ FVGSNN+N L+P+G FG+R QGG D ASARYI TRLSP  R +F  
Sbjct: 775  EASLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRLQGGSDCASARYIHTRLSPFARRIFHA 834

Query: 828  DDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL 887
             D+ LL    +DG+ IEP  Y+P++P +L+NG++GIGTGWS+ IPN+NP DIVAN+RRL+
Sbjct: 835  ADEPLLKSNIDDGKVIEPEVYVPVVPMILINGADGIGTGWSTSIPNFNPEDIVANLRRLM 894

Query: 888  NGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYR 947
            +GE + PM PW+RGF G  E TAS   G  Y  +GII++  +  + I ELPIR WTQD++
Sbjct: 895  DGESLVPMKPWFRGFTG--EVTAS---GDRYKFSGIIKQTGDCEVEITELPIRTWTQDFK 949

Query: 948  EFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTS 1005
            + LE II  ++  SFI+ ++ Y+  + V F + + E+ M +  ++GL ++FKL+ TI+T+
Sbjct: 950  DKLEEIIKAEKAPSFIKDYKDYNTHSKVHFIIQMDEKHMKKALEDGLEERFKLSKTIATT 1009

Query: 1006 NMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGV 1065
            NM  FD++G I KYDT E IL+ F+ +R+ FYEKRK+  L  L  EL K  N+ RF+  +
Sbjct: 1010 NMVAFDAEGRITKYDTAEDILKAFYAVRIRFYEKRKQHLLAQLHKELDKFTNQARFVQMI 1069

Query: 1066 VNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS 1125
            ++G++V++ +++  L+ EL++KGF P P   K+++A   G  +   E EE  E    + S
Sbjct: 1070 IDGKLVISKKRKAKLIEELKEKGFKPIP---KAVDAAKEGENEPAVEEEEESEEDEQLSS 1126

Query: 1126 IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL-DEL 1184
              +DYLL M + +LT E+V+ LL        E+D L K + E LW +DLD    +  ++L
Sbjct: 1127 DVFDYLLGMPLWSLTQERVEKLLRQIGDKELEIDALIKLSKEDLWKRDLDEFITEWRNQL 1186

Query: 1185 DKSDARAEEER-------MKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNA-RATEAMG 1236
            +  + RA++ R        K+K  G G AG K       + A  +D  S+ A +A +A  
Sbjct: 1187 EDEERRAKKARSYGRRTSTKLKTAGRGPAGKK-------RKALGDDDDSDFAPKAKKA-- 1237

Query: 1237 EMDNVTKVVKPKG--------RAGLKKAPAEKLDDDEEDE------VPDLKQRLAKLNEQ 1282
                V   VKPKG         A   K  A +LD   E E      +P  K R A   + 
Sbjct: 1238 ---TVVNKVKPKGGLLDYLSKPAAKSKTKATRLDSTSETEDFEAEVIPQKKSRAASNKKP 1294

Query: 1283 LASTKL---EPSPDQSGVM--ET-EKVQVPAK---------------KKEPSKRTAAQKK 1321
             A+T     +   D+  ++  ET EK + PA+               K +P+K+  A  K
Sbjct: 1295 EAATTFAFSDSEDDKDDILSKETDEKAREPARPPSPDIPAISDSDDYKPKPAKKATAVSK 1354

Query: 1322 VVTVETSDSEDEII 1335
                E  DS+ EI+
Sbjct: 1355 KAPKEHDDSDIEIV 1368


>gi|395532492|ref|XP_003768304.1| PREDICTED: DNA topoisomerase 2-alpha isoform 2 [Sarcophilus harrisii]
          Length = 1550

 Score = 1189 bits (3077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 630/1203 (52%), Positives = 824/1203 (68%), Gaps = 74/1203 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+EE   + +R +++VPGLYKIFDE
Sbjct: 34   SVERIYQKKTQLEHILLRPDTYIGSVEVVTQQMWVYDEEV-GLNYRDVTFVPGLYKIFDE 92

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM+ +KV ID E++ IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 93   ILVNAADNKQRDPKMNCIKVTIDSENNTISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 152

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST F +ETA  +  K +KQ + +NMGK  E  + 
Sbjct: 153  SSNYDDDEKKVTGGRNGYGAKLCNIFSTRFTVETACKEYKKLFKQTWRDNMGKAGEMTL- 211

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF MT+L+ D+VALM +R  D+AG   K VKV LNG+R+PVK
Sbjct: 212  KPFSGEDYTCITFQPDLSKFKMTNLDKDIVALMSRRAYDIAGST-KDVKVFLNGNRLPVK 270

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K         +   HE VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 271  GFRSYVDLYVKDKLDETGNPLKIIHEEVNNRWEVCLTMSEKGFQQISFVNSIATSKGGRH 330

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+ + ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 331  VDYVADQIISRLIDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 390

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKCELSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 391  KSFGSKCELSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 449

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG +NS  CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 450  NDAGSKNSTDCTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 509

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++KSLRYG +MIMTDQ                      
Sbjct: 510  AEINNIIKIVGLQYKKNYEDADSLKSLRYGKIMIMTDQ---------------------- 547

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + +N + LSFYS+P+
Sbjct: 548  ------DQDGSHIKGLLINFIHHNWPSLLR-HCFLEEFITPIVKVS-RNKQELSFYSLPE 599

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF +++ H+  F +   +D  AI LAF
Sbjct: 600  FEEWKNSTE-NHKKWKVKYYKGLGTSTSKEAKEYFSDMSRHRIQFKYSGPEDDAAISLAF 658

Query: 673  SKKKIEARKKWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  K  K++ Y+DF+NKELILFS +D +R
Sbjct: 659  SKKQIDDRKEWLTHFMEDRRQRKLLGLPEDYLYGKATKHLTYNDFINKELILFSNSDNER 718

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 719  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 778

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD+ L +L +D 
Sbjct: 779  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPAKDDQTLKFLYDDN 838

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRL++GE   PM P Y+
Sbjct: 839  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLMDGEEPLPMLPSYK 898

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++ A  +    Y ++G +  +N TT+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 899  NFKGTIDELAPNQ----YIISGEVSILNSTTIEISELPVRTWTQVYKEQVLEPMLNGTDK 954

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE + + +  GL K FKL T ++ ++M LFD  G +
Sbjct: 955  TPPLITDYREYHTDTTVKFIVKMTEEKLAQAEHAGLHKVFKLQTNLTCNSMVLFDHVGCL 1014

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL++FF +RL++Y  RK+     L  E  +L N+ RFIL  + G+IV+ N+ 
Sbjct: 1015 KKYDTALDILKDFFDLRLKYYGLRKEWLTGMLGAESARLNNQARFILEKIEGKIVIENKP 1074

Query: 1077 RTDLLLELRQKGFTPFP-KNSKSIEAVVAG-ATDETEESEENPEVVNGVQSID----YDY 1130
            + +L+  L Q+G+   P K  K  +    G   DE EESE   E   G  + D    ++Y
Sbjct: 1075 KKELIKVLIQRGYDSDPVKAWKEAQQKSPGDNEDENEESENEKETEKGDSATDSGPTFNY 1134

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R +  +E++ L++ +P  LW +DL A   +L+ ++  + R
Sbjct: 1135 LLDMPLWYLTKEKKDELCRQRTEKEQELETLKRKSPSDLWREDLAAFVEELEVVEAKEKR 1194

Query: 1191 AEE 1193
             E+
Sbjct: 1195 DEQ 1197


>gi|395816620|ref|XP_003781796.1| PREDICTED: DNA topoisomerase 2-beta [Otolemur garnettii]
          Length = 1613

 Score = 1189 bits (3077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1199 (52%), Positives = 818/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 39   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 97

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 98   ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 157

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 158  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 216

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 217  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 275

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 276  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 335

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 336  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 395

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 396  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 454

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 455  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 514

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 515  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 552

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 553  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 604

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE +EYF ++  H+  F +   +D  AI LAF
Sbjct: 605  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAREYFADMERHRILFRYAGPEDDAAITLAF 663

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 664  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 723

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 724  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 783

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 784  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAMDDNLLKFLYDDN 843

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 844  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 903

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 904  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 959

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 960  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1019

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1020 KKYETVQDILREFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1079

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S  D++Y+L+M+
Sbjct: 1080 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPSGPDFNYILNMS 1139

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1140 LWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1195


>gi|119584762|gb|EAW64358.1| topoisomerase (DNA) II beta 180kDa, isoform CRA_b [Homo sapiens]
          Length = 1643

 Score = 1189 bits (3077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1188 (52%), Positives = 812/1188 (68%), Gaps = 71/1188 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 45   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 103

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 104  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 163

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 164  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 222

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG C G  VKV  NG ++PV
Sbjct: 223  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCRG--VKVMFNGKKLPV 280

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
              F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG 
Sbjct: 281  NGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGR 340

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+
Sbjct: 341  HVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQ 400

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 401  PKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDD 459

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ 
Sbjct: 460  ANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIME 519

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                     
Sbjct: 520  NAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ--------------------- 558

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P
Sbjct: 559  -------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIP 609

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LA
Sbjct: 610  EFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLA 668

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +
Sbjct: 669  FSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNE 728

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 729  RSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 788

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D
Sbjct: 789  QNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDD 848

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y
Sbjct: 849  NQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNY 908

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 909  KNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTD 964

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G 
Sbjct: 965  KTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGC 1024

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR
Sbjct: 1025 LKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENR 1084

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
             + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M
Sbjct: 1085 SKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNM 1144

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
            ++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A   +LD
Sbjct: 1145 SLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAFVEELD 1192


>gi|338714796|ref|XP_001492165.2| PREDICTED: DNA topoisomerase 2-beta-like [Equus caballus]
          Length = 1627

 Score = 1189 bits (3076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1199 (52%), Positives = 819/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 54   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 112

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 113  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 172

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 173  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 231

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 232  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 290

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 291  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 350

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV + ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 351  VDYVVDQVVSKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 410

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 411  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 469

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 470  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 529

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 530  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 567

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 568  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 619

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 620  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 678

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 679  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 738

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 739  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 798

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 799  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 858

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L G    PM P Y+
Sbjct: 859  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLEGLDPHPMLPNYK 918

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 919  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 974

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 975  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1034

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1035 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1094

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S  D++Y+L+M+
Sbjct: 1095 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPSGPDFNYILNMS 1154

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1155 LWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1210


>gi|326482946|gb|EGE06956.1| DNA topoisomerase II [Trichophyton equinum CBS 127.97]
          Length = 1678

 Score = 1189 bits (3076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1345 (47%), Positives = 865/1345 (64%), Gaps = 89/1345 (6%)

Query: 9    LTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTM 68
            L    N +    T       E YQK +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M
Sbjct: 108  LANVENGSFTAETVEGGGSSEKYQKITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELM 167

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIH 128
             +R +S+VPGLYKIFDEILVNAADNKQ DP M  ++V +D+E   ISV N+G G+PVEIH
Sbjct: 168  EYREVSFVPGLYKIFDEILVNAADNKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIH 227

Query: 129  QEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKY 188
            ++E +Y+PELIFGHLLTSSNY+D  +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+
Sbjct: 228  KKEQIYIPELIFGHLLTSSNYNDMQEKVTGGRNGYGAKLCNIFSNEFTVETADSKQKKKF 287

Query: 189  KQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGC 248
            K  +TNNM    +  I++CK GD++TKV+FKPD AKF M  ++DD  AL+K+RV D+AG 
Sbjct: 288  KLTWTNNMSTMGKAKITECK-GDDYTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGT 346

Query: 249  LGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR---------------FHERVNERWEICV 293
             G SVK  LNG R+P+KSF +Y++MY K++                   E  + RWEI  
Sbjct: 347  CGTSVK--LNGTRIPIKSFKKYMEMYTKAIKAERGEDSTSASDKNDIITESPDRRWEIGF 404

Query: 294  TLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLW 352
            T+S+G FQQVSFVN IAT  GGTHV+Y+++Q+ N +   + KKNK  A +KA  +KNH++
Sbjct: 405  TVSDGSFQQVSFVNSIATTSGGTHVNYISDQICNKLADALKKKNKAGATLKAAQIKNHIF 464

Query: 353  VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS 412
            +FVN+ I NPAF SQTKE LT R S FGSKC +S++FLKKV  K+ +++ +L +A  K  
Sbjct: 465  LFVNSQIVNPAFTSQTKEQLTTRASQFGSKCVVSDDFLKKVM-KTRVMDDILHFAEKKAD 523

Query: 413  KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF 472
            + LKK DG +   +    KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D F
Sbjct: 524  QILKKTDGNRRSRMNN-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLF 582

Query: 473  GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVL 532
            GVFPLRGKLLNVR+AS +Q+  N+EI NIK  +GL+   EY + + LRYGHLMIMTDQ  
Sbjct: 583  GVFPLRGKLLNVRDASVDQISKNAEIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ-- 640

Query: 533  LAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 592
                                      DHDGSHIKGLLIN++   +P+LLKIP FL+EFIT
Sbjct: 641  --------------------------DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFIT 674

Query: 593  PIVKATNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQ 648
            PIVK    N K      SF+++P+YE WKE+   +   W  KYYKGLGTS++++ + YFQ
Sbjct: 675  PIVKVWKGNPKNPTHTKSFFTLPEYEEWKEAHAHD-KKWQKKYYKGLGTSSTEDAQIYFQ 733

Query: 649  NITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNK 708
            ++  H K F    D++ E IELAFSKKK + RK+WL QF+PG +LD     I Y+DF+NK
Sbjct: 734  DLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINK 793

Query: 709  ELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGE 768
            ELILFSMAD  RSIPS+VDGLKPGQRK+L+  FKRN  K+ KV + +GYVS  +AY HG+
Sbjct: 794  ELILFSMADNIRSIPSVVDGLKPGQRKVLYTMFKRNVRKDVKVVELAGYVSGMTAYQHGD 853

Query: 769  QSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKD 828
             SL +TI+G+AQ FVGSNNIN L+P+G FG+R QGG D+ASARYI+TRLSP  R LF + 
Sbjct: 854  NSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQA 913

Query: 829  DDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN 888
            D+ LL    +DG+ IEP  Y+P++P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ 
Sbjct: 914  DEPLLVNNIDDGKVIEPETYVPVVPLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMA 973

Query: 889  GEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE 948
            GE + PM PW+RGF G  E T S   G  Y  +GII++  +  + I ELPIR WTQD+++
Sbjct: 974  GEELVPMKPWFRGFKG--EVTGS---GDRYKFSGIIKQTADNEVEITELPIRTWTQDFKD 1028

Query: 949  FLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN 1006
             LE II  ++  SFI+ ++ Y+  T V F + + E+ M +  +EGL +KFKL   I+TSN
Sbjct: 1029 KLEEIIKAEKVPSFIKDYKDYNTHTDVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSN 1088

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            M  FD++G I +Y+TPE IL  F+ +R++ YEKRK+  L  L+ +L KL N+ RF+  ++
Sbjct: 1089 MVAFDAEGRITRYETPEDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMII 1148

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI 1126
            +G++V++ +K+  L+ EL++KGF PFPK   + E   AG  D  EE +E  E      S 
Sbjct: 1149 DGKLVISKKKKAVLIQELQEKGFKPFPKVVGTPEPGEAG--DVEEEEDEEEETTTAAASS 1206

Query: 1127 D-YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQL 1181
            D YDYLLSM + +LT E+V  L         EVD L K + E LW KDLD        QL
Sbjct: 1207 DAYDYLLSMPLWSLTQERVDKLRRQIGDKEMEVDALIKLSKEDLWRKDLDEFISEWRFQL 1266

Query: 1182 DELDKSDARAEEERMKIKGNGNG-----DAGPKIVAKRAPKNARKND--------KKSNN 1228
            ++        E  R KI   G         G +  A +  K    +D        KK+  
Sbjct: 1267 ED-------EENRRKKIASRGRRLSAKVKTGSRATAAKKRKAGSGDDSDFDVPKVKKAAV 1319

Query: 1229 ARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKL 1288
             R     G +D ++K  KPK +A  +   A+  DD E++ +P  K R A    +     +
Sbjct: 1320 NRVQPKGGLLDFLSK-AKPKPKATSRVDGADDSDDFEDEVMPKPKSRGAAKEAKAKPAPV 1378

Query: 1289 EPSPDQSGVMETEKVQVPAKKKEPS 1313
                  +  M+ + +     K+EPS
Sbjct: 1379 PKRLSDADFMDIDSMGTDNPKREPS 1403


>gi|327309598|ref|XP_003239490.1| DNA topoisomerase II [Trichophyton rubrum CBS 118892]
 gi|326459746|gb|EGD85199.1| DNA topoisomerase II [Trichophyton rubrum CBS 118892]
          Length = 1674

 Score = 1189 bits (3075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1305 (48%), Positives = 856/1305 (65%), Gaps = 92/1305 (7%)

Query: 15   ANVVGPTAPNKTIE-----EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI 69
            ANV   +   +T+E     E YQK +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M 
Sbjct: 109  ANVENGSFTTETVEGGGSSEKYQKITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELME 168

Query: 70   HRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQ 129
            +R +S+VPGLYKIFDEILVNAADNKQ DP M  ++V +D+E   ISV N+G G+PVEIH+
Sbjct: 169  YREVSFVPGLYKIFDEILVNAADNKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHK 228

Query: 130  EEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYK 189
            +E +Y+PELIFGHLLTSSNY+D  +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K
Sbjct: 229  KEQIYIPELIFGHLLTSSNYNDMQEKVTGGRNGYGAKLCNIFSKEFTVETADSKQKKKFK 288

Query: 190  QVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCL 249
              +TNNM    +  I++CK GD++TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  
Sbjct: 289  LTWTNNMSTMGKAKITECK-GDDYTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTC 347

Query: 250  GKSVKVELNGHRVPVKSFAEYVDMYPKSVTR---------------FHERVNERWEICVT 294
            G +VK  LNG R+P+KSF +Y++MY K++                   E  + RWEI  T
Sbjct: 348  GTAVK--LNGTRIPIKSFKKYMEMYTKAIKAERGEDPTSASDKNDIITESPDRRWEIGFT 405

Query: 295  LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWV 353
            +S+G FQQVSFVN IAT  GGTHV+Y+++Q+ N +   + KKNK  A +KA  +KNH+++
Sbjct: 406  VSDGSFQQVSFVNSIATTSGGTHVNYISDQICNKLADALKKKNKTGATLKATQIKNHIFL 465

Query: 354  FVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSK 413
            FVN+ I NPAF SQTKE LT R S FGSKC +S++FLKKV  K+ +++ +L +A  K  +
Sbjct: 466  FVNSQIVNPAFTSQTKEQLTTRPSQFGSKCVVSDDFLKKVM-KTRVMDDILHFAEKKADQ 524

Query: 414  DLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFG 473
             LKK DG +   +    KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FG
Sbjct: 525  ILKKTDGNRRSRMNN-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFG 583

Query: 474  VFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLL 533
            VFPLRGKLLNVR+AS +Q+  N+EI NIK  +GL+   EY + + LRYGHLMIMTDQ   
Sbjct: 584  VFPLRGKLLNVRDASVDQISKNAEIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ--- 640

Query: 534  APLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITP 593
                                     DHDGSHIKGLLIN++   +P+LLKIP FL+EFITP
Sbjct: 641  -------------------------DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITP 675

Query: 594  IVKATNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
            IVK    + K      SF+++P+YE WKE+   +   W  KYYKGLGTS++++ + YFQ+
Sbjct: 676  IVKVWKGDPKNPTHTKSFFTLPEYEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQIYFQD 734

Query: 650  ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKE 709
            +  H K F    D++ E IELAFSKKK + RK+WL QF+PG +LD     I Y+DF+NKE
Sbjct: 735  LDRHLKQFHTLQDKEAELIELAFSKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINKE 794

Query: 710  LILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQ 769
            LILFSMAD  RSIPS+VDGLKPGQRK+L+  FKRN  ++ KV + +GYVS  +AY HG+ 
Sbjct: 795  LILFSMADNIRSIPSVVDGLKPGQRKVLYTMFKRNVRRDIKVVELAGYVSGMTAYQHGDN 854

Query: 770  SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
            SL +TI+G+AQ FVGSNNIN L+P+G FG+R QGG D+ASARYI+TRLSP  R LF + D
Sbjct: 855  SLHTTIVGLAQTFVGSNNINCLEPSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQAD 914

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
            + LL    +DG+ IEP  Y+P++P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ G
Sbjct: 915  EPLLVNNVDDGKVIEPETYVPVVPLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMAG 974

Query: 890  EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREF 949
            E + PM PW+RGF G  E T S   G  Y  +GII++  +  + I ELPIR WTQD+++ 
Sbjct: 975  EELVPMKPWFRGFKG--EVTGS---GDRYKFSGIIKQTGDNEVEITELPIRTWTQDFKDK 1029

Query: 950  LESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
            LE II  ++  SFI+ ++ Y+  T V F + + E+ M +  +EGL +KFKL   I+TSNM
Sbjct: 1030 LEEIIKAEKVPSFIKDYKDYNTHTNVHFVIQMEEKHMKKALEEGLEEKFKLVKQIATSNM 1089

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVN 1067
              FD++G I +Y+TPE IL  F+ +R++ YEKRK+  L  L+ +L KL N+ RF+  +++
Sbjct: 1090 VAFDAEGRITRYETPEDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIID 1149

Query: 1068 GEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID 1127
            G++V++ +K+  L+ EL++KGF PFPK   + E   AG  +E E+ EE       V S  
Sbjct: 1150 GKLVISKKKKAVLIQELQEKGFKPFPKVVGTPEPGEAGDIEEEEDEEEE-TASAAVSSDA 1208

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDE 1183
            YDYLLSM + +LT E+V  L         EVD L K T E LW KDLD        QL++
Sbjct: 1209 YDYLLSMPLWSLTQERVDKLRRQIGDKEMEVDTLIKLTKEDLWRKDLDEFISEWRFQLED 1268

Query: 1184 LDKSDARAEEERMKIKGNGNG-----DAGPKIVAKRAPKNARKND--------KKSNNAR 1230
                    E  R KI   G         G +  A +  K    +D        KK+   R
Sbjct: 1269 -------EETRRKKIASRGRRLSAKVKTGSRATAAKKRKAGSGDDSDFDVPKGKKATVNR 1321

Query: 1231 ATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQR 1275
                 G +D ++K  KPK +A  +   A+  DD E++ +P  K R
Sbjct: 1322 VQPKGGLLDFLSK-AKPKPKATSRVDGADDSDDFEDEVMPKPKSR 1365


>gi|403290004|ref|XP_003936124.1| PREDICTED: DNA topoisomerase 2-beta [Saimiri boliviensis boliviensis]
          Length = 1715

 Score = 1189 bits (3075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1199 (52%), Positives = 819/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 140  SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 198

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 199  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 258

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 259  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 317

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 318  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 376

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 377  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 436

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 437  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 496

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 497  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 555

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 556  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 615

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 616  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 653

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 654  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 705

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 706  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 764

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 765  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 824

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 825  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 884

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 885  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 944

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 945  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 1004

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 1005 NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 1060

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 1061 TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1120

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1121 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1180

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S  D++Y+L+M+
Sbjct: 1181 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPSGPDFNYILNMS 1240

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1241 LWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1296


>gi|291000712|ref|XP_002682923.1| DNA topoisomerase II [Naegleria gruberi]
 gi|284096551|gb|EFC50179.1| DNA topoisomerase II [Naegleria gruberi]
          Length = 1457

 Score = 1189 bits (3075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1182 (52%), Positives = 818/1182 (69%), Gaps = 67/1182 (5%)

Query: 24   NKTIEEMYQKKSQLEHILLRPDTYIGSIE-KHTQALWIYEEESKTMIHRTISYVPGLYKI 82
            NKT+EE+YQKKS  E ILLRPDTY+GS+  +  + +WI+++E K M  +TI +VP LYKI
Sbjct: 47   NKTVEEIYQKKSLREQILLRPDTYVGSVNMQEGEDMWIWDDEDKRMKMKTIKFVPALYKI 106

Query: 83   FDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
            FDEILVNAAD+  RD   + +KV I+ E + ISV+N+G G+PV+IH E  +YVP +IFGH
Sbjct: 107  FDEILVNAADHSVRDETCNKIKVTINPEQNEISVYNNGAGIPVKIHAEHKIYVPTMIFGH 166

Query: 143  LLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP 202
            LLTSSN+DD  K+ TGGRNGYGAKLTNIFS +FI+ET D +  KK++Q +T NM K+ EP
Sbjct: 167  LLTSSNFDDTQKRVTGGRNGYGAKLTNIFSEKFIVETVDSEEKKKFRQTWTQNMEKEEEP 226

Query: 203  NISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
             I+ C + +++T+++F PDL+KF M  L+DD+V+L+KKRV DLAG L   + + LNG ++
Sbjct: 227  KITTCSKAESYTEITFYPDLSKFGMDKLDDDIVSLLKKRVYDLAGTLKTGIGIYLNGKKI 286

Query: 263  P-VKSFAEYVDMYP--KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
              +K+F +YV +Y   K +  F +   +RW++ +TLSEG  QQVSFVN I T KGG HVD
Sbjct: 287  TGMKTFKDYVKLYTIDKEIHYFED--GKRWKVGITLSEGSMQQVSFVNSICTTKGGKHVD 344

Query: 320  YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
            ++ NQV++++   + KKN    +K   +KN LWVFV++LI NP+FDSQ+KETLT     F
Sbjct: 345  HIVNQVSDNIKKALVKKNNT--IKPAYIKNQLWVFVSSLIINPSFDSQSKETLTTSMKDF 402

Query: 380  GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG 439
            GSKC+L E FLKKVT  +   E +L +A+FK  K L K  GTK   + GISKL+DAN AG
Sbjct: 403  GSKCKLDEAFLKKVTKMAS--EAVLKYADFKSEKALNKKSGTKKSRLTGISKLDDANDAG 460

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
             +NSE+CTLILTEGDSAKALA+ GLSVVGRD +GVFPL+GK LNVR+   ++V+ N EI 
Sbjct: 461  SKNSEKCTLILTEGDSAKALAVGGLSVVGRDYYGVFPLKGKPLNVRDCKLDKVVKNEEIS 520

Query: 500  NIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLA 557
             + KILGLK    Y   ++KSLRYG +MIM DQ                           
Sbjct: 521  TLAKILGLKFDKTYTKEDIKSLRYGSIMIMADQ--------------------------- 553

Query: 558  QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATN-KNGKVLSFYSMPDYEAW 616
             DHDGSHIKGLLINFIH FWPSLLKIP FL EFITPIVKATN +  K ++F+S+P+YE W
Sbjct: 554  -DHDGSHIKGLLINFIHKFWPSLLKIPGFLKEFITPIVKATNNRTKKAVTFFSIPEYETW 612

Query: 617  KESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKK 676
            KE L  +   W+IKYYKGLGTST+ E KEYF N++LH+K F ++ D D + I   FSK  
Sbjct: 613  KEGLS-DTKGWTIKYYKGLGTSTAPEAKEYFSNMSLHQKRFKYDTDCD-KKITSVFSKAA 670

Query: 677  IEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKI 736
             + RK+WL   + G ++D  +K I Y+DF++KELILFS AD +RSIPS+VDGLKPGQRKI
Sbjct: 671  TDERKEWLNNHQEGTYIDHSKKEISYTDFIDKELILFSKADCKRSIPSIVDGLKPGQRKI 730

Query: 737  LFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQ 796
            LF  FKRN  KE KVAQ +GYVSE SAYHHGE SL  T++ MAQ+FVGSNNINLL P G 
Sbjct: 731  LFSCFKRNLKKEIKVAQLAGYVSEQSAYHHGEDSLNGTVVNMAQNFVGSNNINLLYPGGM 790

Query: 797  FGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVL 856
            FGTR QGGKD+AS RYIFT+LS ITR++FPK DD +L+YL++DGQ IEP +Y+PI+P VL
Sbjct: 791  FGTRLQGGKDSASPRYIFTKLSEITRYIFPKADDPVLEYLDDDGQSIEPRFYVPILPMVL 850

Query: 857  VNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGV 916
            VNGSEGIGT WS+ I  YNP DIV  ++ L+ GE  +  HPWY+GF G IE+ A      
Sbjct: 851  VNGSEGIGTAWSTNIETYNPVDIVEGLKALIKGEEAKEFHPWYKGFDGIIERLAP----T 906

Query: 917  TYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFE 976
             +   G+IE++++ TL I ELPIR WT+ ++E LE +++     +  FR+   D TV F 
Sbjct: 907  KWQTKGVIEKIDDNTLDISELPIRIWTESFKERLEKMMEAQQ--VDDFRENHTDVTVSFT 964

Query: 977  VFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEF 1036
            V ++++ M   +  GL   FKL    STSNM LF  +G IK+Y+T   IL+EF+ IRL+F
Sbjct: 965  VKMTDKQMKDAEDAGLYDYFKLFKKFSTSNMVLFSEEGGIKEYETVLDILKEFYPIRLKF 1024

Query: 1037 YEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNS 1096
            Y KRK+  LE ++ EL  L NKVRFI+ V+N  I V  RK+ DLL EL+ K ++ FPK  
Sbjct: 1025 YGKRKEYMLEKMKKELEILSNKVRFIMEVINETIQVKKRKKADLLKELKTKKYSSFPKEK 1084

Query: 1097 KSIEAVVAGATD--------ETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLL 1148
            K     +A A D        E +E ++  ++ +G     Y+YLLSM + +LT+EKV+ L 
Sbjct: 1085 K-----IAAAGDIQNEEEEEEEDEEKDVADLTDG-----YNYLLSMPLWSLTVEKVKKLE 1134

Query: 1149 ADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
             ++++  +EV+ L    PE++W+ +LD    +LD  ++ + +
Sbjct: 1135 KEKEEKVKEVEQLENTKPETMWLSELDEFLEKLDSYEQKEQK 1176


>gi|158299572|ref|XP_319665.4| AGAP008917-PA [Anopheles gambiae str. PEST]
 gi|157013582|gb|EAA14841.5| AGAP008917-PA [Anopheles gambiae str. PEST]
          Length = 1427

 Score = 1188 bits (3074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1258 (49%), Positives = 833/1258 (66%), Gaps = 105/1258 (8%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K+IE++YQKKSQLEHILLRPDTYIGS+E   + +WI+++E+  M+ R I+YVPGLYKIFD
Sbjct: 5    KSIEKIYQKKSQLEHILLRPDTYIGSVEMVKEPMWIFDKEANKMVQRDITYVPGLYKIFD 64

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDPKM  +KV I+QE + ISV N G G+PV +H+EE +YVP +IFGHLL
Sbjct: 65   EILVNAADNKQRDPKMSTIKVEINQETNTISVWNDGHGIPVVMHKEEKMYVPTMIFGHLL 124

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNY+D  +K TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NM K +EP I
Sbjct: 125  TSSNYNDEEEKVTGGRNGYGAKLCNIFSTKFTVETASKQYKKCFKQTWGDNMSKTTEPKI 184

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
             +   G+++TK++F PDL+KF M  L+DD+V L+ +R  D+A    + V V LNG RVPV
Sbjct: 185  KEDFFGNDYTKITFSPDLSKFKMEKLDDDIVGLLSRRAYDVAAST-RGVSVYLNGTRVPV 243

Query: 265  KSFAEYVDMYPKSVT--------RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            K+F +Y+D++ +  T          +E VNERWE+ V +SE  FQQVSFVN IAT KGG 
Sbjct: 244  KNFKDYIDLFLRDTTDDVGAPVKMCYESVNERWEVAVAISERGFQQVSFVNSIATTKGGR 303

Query: 317  HVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV++ +   ++ V+ KKNK    +K   VKNH+WVF+N LI NP FDSQTKE +TL+
Sbjct: 304  HVDYVSDMIVKQLIEVLKKKNKGGVTIKPFQVKNHMWVFINCLIVNPTFDSQTKENMTLQ 363

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDA 435
              SFGSKC LSE+F+  V+ KSGIVE++L WA FK   DL K  G+K   ++GI KLEDA
Sbjct: 364  SKSFGSKCALSEKFITAVS-KSGIVESVLQWAKFKAQTDLAKTSGSKKSKIKGIPKLEDA 422

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG RNS  CTLILTEGDSAK LA++GL VVGRD +GVFPLRGKLLNVREA+  Q+L N
Sbjct: 423  NDAGSRNSLNCTLILTEGDSAKTLAVSGLGVVGRDTYGVFPLRGKLLNVREATHKQILEN 482

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI N+ KILGL+   +Y   +++K+LRYG +MIMTDQ                      
Sbjct: 483  AEINNLIKILGLQYKKKYLTMDDLKTLRYGKVMIMTDQ---------------------- 520

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH+ WP LL++P FL EFITPIVKAT KNG+ LSF+S+P+
Sbjct: 521  ------DQDGSHIKGLLINFIHTNWPELLRLP-FLEEFITPIVKATKKNGEELSFFSLPE 573

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK     N+ +++IKYYKGLGTSTSKE KEYFQN+  H+  F +ED  D +AI LAF
Sbjct: 574  FEEWKAETA-NSHTYNIKYYKGLGTSTSKEAKEYFQNMERHRILFRYEDTGDDDAIMLAF 632

Query: 673  SKKKIEARKKWLL-QFEPGNH---LDQKEKY--------IKYSDFVNKELILFSMADLQR 720
            SKK IE RK WL    E   H   +  +E+Y        I Y DFVN EL+LFS +D  R
Sbjct: 633  SKKAIEQRKDWLTAHMEECRHRKSVGLQERYLYTKTTKEISYKDFVNLELVLFSNSDNVR 692

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIP M+DGLKPGQRK+L+  FKR+  +E KVAQ +G V+E SAYHHGE SL STI+ +AQ
Sbjct: 693  SIPCMLDGLKPGQRKVLYTCFKRDDKREVKVAQLAGSVAEKSAYHHGEMSLCSTIINLAQ 752

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            ++VGSNNINLL P GQFGTR  GGKD+AS RYIFT LS +TR +F   DD LL+Y  ED 
Sbjct: 753  NYVGSNNINLLYPGGQFGTRLTGGKDSASPRYIFTMLSALTRHIFHPLDDPLLEYQYEDN 812

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q+IEP WY+PIIP +L+NG++GIGTGW++ IPN+NPRD++AN+RR+LNG+  + + PWY+
Sbjct: 813  QRIEPVWYLPIIPMLLINGADGIGTGWATKIPNHNPRDVIANIRRMLNGDEPKMLTPWYK 872

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F G IE    ++    Y   G +  ++   + I ELPI  WTQ Y+E  LE ++   D+
Sbjct: 873  NFRGVIESVGHQK----YLTAGTVGLLDGKKIEISELPIGTWTQTYKENVLEPLLHGSDK 928

Query: 957  NDSFIRGFRQYSDDTTVDFEV-FL-SEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
              + I  +++Y+ DTTV F + FL  E   +  ++ G  + FKLT++IST++M+ FD K 
Sbjct: 929  AKAVIADYKEYNTDTTVRFVISFLPGEYEKLYAEEGGFHRLFKLTSSISTASMNAFDDKN 988

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             +K+Y    +I  EF+ +RL+FY KR+   L  L+ E   L +K RFI+   NG +VV N
Sbjct: 989  YLKRYAHANEIFMEFYTVRLDFYGKRRAYLLGMLQAEADSLSDKARFIMEKCNGTLVVEN 1048

Query: 1075 RKRTDLLLELRQKGFTPFP-------------------------------KNSKSIEAVV 1103
            +KR  L+ EL ++G+   P                               K  KS     
Sbjct: 1049 KKRKALIDELIKRGYRADPIQEWKRRVQTNDEEEEDQQGEGEEEEEQEDVKPGKSTAGKG 1108

Query: 1104 AGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
             GA   + + E+  + +  V+   ++YLL M++  LT E+   +L  RD+   E+  L  
Sbjct: 1109 KGAGSSSVDPEKAFQRLTDVKK--FNYLLGMSMWMLTEERKNEILKQRDQKLAELKSLEA 1166

Query: 1164 ATPESLWVKDLDALDMQLDEL---DKSDARAEEERMK---IKGNGNGDAGPKIVAKRA 1215
             T + LW+ DLDAL  +LDE+   ++ DA + E+++K   +K +  G     +  K A
Sbjct: 1167 KTVQGLWMDDLDALSRKLDEVEEKERLDAISTEKKLKAGMMKASAGGGRAKAVSRKTA 1224


>gi|350537403|ref|NP_001233667.1| DNA topoisomerase 2-alpha [Cricetulus griseus]
 gi|1174741|sp|P41515.1|TOP2A_CRIGR RecName: Full=DNA topoisomerase 2-alpha; AltName: Full=DNA
            topoisomerase II, alpha isozyme
 gi|191218|gb|AAA37023.1| DNA topoisomerase II [Cricetulus griseus]
 gi|344256934|gb|EGW13038.1| DNA topoisomerase 2-alpha [Cricetulus griseus]
          Length = 1526

 Score = 1188 bits (3074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 683/1474 (46%), Positives = 914/1474 (62%), Gaps = 129/1474 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 28   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 86

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 87   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 146

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST F +ETA  +  K +KQ + +NMG+  +  + 
Sbjct: 147  SSNYDDDEKKVTGGRNGYGAKLCNIFSTRFTVETASKEYKKMFKQTWMDNMGRAGDMEL- 205

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 206  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 264

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        ++   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 265  GFRSYVDMYLKDKLDETGNALKVVHEQVNPRWEVCLTMSEKGFQQISFVNSIATSKGGRH 324

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+ + ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 325  VDYVADQIVSKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 384

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 385  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQIQLNKKCSAVKHNRIKGIPKLDDA 443

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG RNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 444  NDAGSRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 503

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 504  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 541

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + L+FYS+P+
Sbjct: 542  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQELAFYSLPE 593

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 594  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 652

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+++ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 653  SKKQVDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 712

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 713  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 772

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+TR LFP  DD  L +L +D 
Sbjct: 773  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLTRLLFPPKDDHTLKFLYDDN 832

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRLL+GE   PM P Y+
Sbjct: 833  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDIREVVNNIRRLLDGEEPLPMLPSYK 892

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ AS +    Y + G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 893  NFKGTIEELASNQ----YVINGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 948

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F + ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 949  TPPLITDYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1008

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL++FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1009 KKYDTVLDILKDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1068

Query: 1077 RTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMA 1135
            + +L+  L Q+G+   P K  K  +  V    +  E   EN + V       ++YLL M 
Sbjct: 1069 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNENSDSV-AESGPTFNYLLDMP 1127

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEER 1195
            +  LT EK   L   R++  +E++ L+  +P  LW +DL     +L+ ++  + + E+  
Sbjct: 1128 LWYLTKEKKDELCKQRNEKEQELNTLKNKSPSDLWKEDLAVFIEELEVVEAKEKQDEQVG 1187

Query: 1196 MKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKK 1255
            +  KG        ++       + ++   +       EA           + K R  +K 
Sbjct: 1188 LPGKGGKAKGKKAQMSEVLPSPHGKRVIPQVTMEMKAEA-----------EKKIRKKIKS 1236

Query: 1256 APAEKLDDDEEDEVPDLKQRLAKLN--EQLASTKLE---------------PSPDQSGVM 1298
               E    +   E+  LKQR+ K    E  A TK +               P  D    M
Sbjct: 1237 ENVEGTPTENGLELGSLKQRIEKKQKKEPGAMTKKQTTLAFKPIKKGKKRNPWSDSESDM 1296

Query: 1299 ETEK--VQVPAKKKEPSKRTAAQKKVVTVETSDSED---EIIIDDDEAF--------EIA 1345
             + +  V VP ++K+P  R AA K   T++    ED       D+DE F        +  
Sbjct: 1297 SSNESNVDVPPREKDP--RRAATKAKFTMDLDSDEDFSGSDGKDEDEDFFPLDTTPPKTK 1354

Query: 1346 APEEGKKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKP--------- 1396
             P++  K   K   ++ +  P ++ K   PA    P A L     TE LKP         
Sbjct: 1355 IPQKNTKKALKPQKSAMSGDPESDEKDSVPASPGPPAADLPAD--TEQLKPSSKQTVAVK 1412

Query: 1397 -----AESSPEKKVRKMRASPFNKKSGSMLGRAG 1425
                 ++SS      K RA P   KS S L   G
Sbjct: 1413 KTATKSQSSTSTAGTKKRAVPKGSKSDSALNAHG 1446


>gi|432921791|ref|XP_004080225.1| PREDICTED: DNA topoisomerase 2-alpha-like [Oryzias latipes]
          Length = 1571

 Score = 1188 bits (3074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 672/1432 (46%), Positives = 897/1432 (62%), Gaps = 141/1432 (9%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPD+YIGS+E  TQ +W+Y+ +   +  R +++VPGLYKIFDE
Sbjct: 25   SVERIYQKKTQLEHILLRPDSYIGSVEPVTQQMWVYDVDV-GLNCRDVTFVPGLYKIFDE 83

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E++ ISV N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 84   ILVNAADNKQRDKSMSCIKVNIDVENNTISVWNNGKGIPVVEHKVEKVYVPALIFGQLLT 143

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD  KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  + NI 
Sbjct: 144  SSNYDDEQKKVTGGRNGYGAKLCNIFSTKFTVETACKESRKTFKQTWYDNMGRAGDTNI- 202

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+ +T ++FKPDL+KF M+ L+ D VALM +R  D+AG   K VKV  NG R+P+ 
Sbjct: 203  KAFDGEEFTCITFKPDLSKFKMSTLDKDTVALMTRRAYDVAGS-SKGVKVFFNGKRLPIT 261

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +T  HE VNERWE+C+T+SE  FQQVSFVN IAT KGG H
Sbjct: 262  GFRSYVDMYVKDKVDELGGPLTVIHEAVNERWEVCLTMSEKGFQQVSFVNSIATTKGGRH 321

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            +DYVA+Q+   ++ VV KKNK    VK   VKNH+W+FVN L++NP FDSQTKE +TL+Q
Sbjct: 322  IDYVADQIVGRLIEVVKKKNKAGVAVKPFQVKNHMWLFVNCLVENPTFDSQTKENMTLQQ 381

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C LS++F K+ T+  GIVE++++W  FK    L KK    K   ++G+ KL+DA
Sbjct: 382  KSFGSTCSLSDKFFKQATS-CGIVESIMNWVKFKAQTQLNKKCSAVKHTKIKGVPKLDDA 440

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG+NS  CTLILTEGDSAK LA++GL VVGRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 441  NDAGGKNSIGCTLILTEGDSAKTLAVSGLGVVGRDRYGVFPLRGKMLNVREASHKQIMEN 500

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI N+ KILGL+    Y++   +KSLRYG +MIMTDQ                      
Sbjct: 501  AEINNVIKILGLQYKKNYSDPESLKSLRYGKIMIMTDQ---------------------- 538

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+  +FL EFITPI+KA+NK  + LSFYS+P+
Sbjct: 539  ------DQDGSHIKGLLINFIHHNWPSLLR-HNFLEEFITPIIKASNKKNQ-LSFYSIPE 590

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            + AWKE+   N  SW IKYYKGLGTSTS+E KEYF ++  H+  F +   +D EAI LAF
Sbjct: 591  FNAWKET-QSNHKSWKIKYYKGLGTSTSQEAKEYFSDMERHRIPFKYSGPEDDEAISLAF 649

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKK+E RK+WL  F            P ++L  Q  K + Y+DF+NKEL+LFS +D +R
Sbjct: 650  SKKKVEERKEWLTNFMVNRRQRREHNLPEDYLYGQSTKSLSYNDFINKELVLFSNSDNER 709

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIP +VDG KPGQRK+LFC FKRN  +E KVAQ +G V+E SAYHHGE SL  TI+G+AQ
Sbjct: 710  SIPCLVDGFKPGQRKVLFCCFKRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQ 769

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R +FP  DD LL Y  +D 
Sbjct: 770  NFVGSNNLNLLQPLGQFGTRLHGGKDSASPRYIFTMLSPLARLVFPPVDDNLLKYNYDDN 829

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIPTVLVNG+EGIGTGW+S IPNY+ R+IV+N+ R+L+GE   PM P Y+
Sbjct: 830  QRVEPEWYIPIIPTVLVNGAEGIGTGWASKIPNYDIREIVSNIHRMLDGEEPLPMLPNYK 889

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQND- 958
            GF GTI++  S +    Y  +G +  ++ TT+ I ELP++ WTQ Y+E  LE +++  D 
Sbjct: 890  GFRGTIDQVMSNQ----YMNSGEVAIIDSTTIEISELPVKTWTQAYKENVLEPMLNGTDK 945

Query: 959  --SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  D TV F V ++EE +M  +  GL K FKL + ++ ++M LFD  G +
Sbjct: 946  VPALITDYKEYHTDATVRFVVKMTEEKLMEAEAAGLHKVFKLQSPLTCNSMVLFDYAGSL 1005

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY++ + IL++FF +R+++Y  RK+  +  L  E  KL N+ RFIL  + G +V+ N+ 
Sbjct: 1006 KKYESVQDILKDFFDLRMKYYVLRKEWLVGMLGAESSKLSNQARFILEKIQGTLVIENKP 1065

Query: 1077 RTDLLLELRQKGFTPFPKNS-KSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMA 1135
            + +L+  L++ G+   P  + K  +       +  EE EE  E  +     DY+YLLSM 
Sbjct: 1066 KKELIRMLQEMGYDSDPVRAWKEAQKKDEDDMEAEEEQEEGAEREDQSSGADYNYLLSMP 1125

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL---DKSDARAE 1192
            +  LT EK + L   RD    E++ L+  +P  LW +DL A   +L+ L   +K DA A 
Sbjct: 1126 MWFLTKEKKEDLCKQRDAKMTELNTLKGKSPADLWKEDLAAFSEELERLEQKEKDDASAP 1185

Query: 1193 EER-------MKIKGNG-----NGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDN 1240
             +R       MK+K             P++ +    +  +K + K    R  + +   D 
Sbjct: 1186 AKRPAKGKKPMKVKQETLPTPQGRRVIPRVTSTMKAEAHKKAELKKGEGRRGKKVKSEDV 1245

Query: 1241 VTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAK---------LNEQLASTKLE-- 1289
            V K+              E+ ++ E+ E   L  RL K         L+ +   T L+  
Sbjct: 1246 VVKM-----------EFGEECENLEQIEETGLAARLGKKTKTQTKRALSSKGKQTTLQFS 1294

Query: 1290 ---------PSPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDE------- 1333
                     P  D+     +++    A ++  ++ T A  K V    SDSEDE       
Sbjct: 1295 TVSKKPKKNPWSDEESEAGSDEESPVAPREHVNRPTKAPVKYV---LSDSEDEFHDLGKT 1351

Query: 1334 -------IIIDDDEAFEIAAPEEGKKGGRKAAGNSKAAKPAAETKKRGPAKK 1378
                   I+ DDD +F   APE           +S  A PA   K   PAKK
Sbjct: 1352 RAPKRKAILSDDDASF---APEPS------VLSDSDVASPAPAVKAPEPAKK 1394


>gi|18369814|dbj|BAB84102.1| DNA topoisomerase II [Aspergillus niger]
          Length = 1391

 Score = 1188 bits (3074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 654/1377 (47%), Positives = 879/1377 (63%), Gaps = 113/1377 (8%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E YQK +QLEHI+ RPDTYIGS+E+ TQ +W+Y  ES+ M +R +SYVPGLYKIFDEI+V
Sbjct: 61   EKYQKLTQLEHIIKRPDTYIGSVERTTQQMWVYSSESEGMEYREVSYVPGLYKIFDEIVV 120

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNKQ D  M  ++V +D+E  +ISV N+G G+P+E+H +E +YVPELIFGHLLTSSN
Sbjct: 121  NAADNKQNDENMSEIRVTVDRESGVISVWNNGRGIPIEMHAKEKIYVPELIFGHLLTSSN 180

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD  +K TGGRNG+GAKL N+FSTEF IET D  + KKY+Q +T NM K  +  I++ K
Sbjct: 181  YDDTQQKVTGGRNGFGAKLCNVFSTEFSIETQDSSQKKKYRQTWTENMTKIGKAKITEAK 240

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
             G+++ KV+FKPD AKF M  ++DD  AL+K+RV DLAG     V V+LNG R+P++ F 
Sbjct: 241  -GEDYAKVTFKPDYAKFGMDGMDDDFEALVKRRVYDLAGTA--KVNVKLNGTRIPIRGFK 297

Query: 269  EYVDMYPKSVTRFHER---------------VNERWEICVTLSEGQFQQVSFVNGIATIK 313
            +Y++MY K++ +  ER                + RWE+   +S+G FQQVSFVN IAT  
Sbjct: 298  KYMEMYTKAIRK--ERGDTGPAPKDEIITCSPDPRWEVGFAVSDGAFQQVSFVNSIATTS 355

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETL 372
            GGTHV+Y+A+++ N +   V KKNKN A +K   ++NH+++FVNALI NPAF SQTKE L
Sbjct: 356  GGTHVNYIADRICNRLAEQVKKKNKNGATLKTAQIRNHIFIFVNALIVNPAFTSQTKEQL 415

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKL 432
            T + S FGSKC L E+F KKV  K+ +++ +L +A  K  + LKK DG +   +    KL
Sbjct: 416  TTKASQFGSKCVLDEDFYKKVL-KTAVMDNILHFAQQKADQMLKKTDGGRRSRMNN-PKL 473

Query: 433  EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
             DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+
Sbjct: 474  TDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASFDQI 533

Query: 493  LNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              N EI NIK  LGL+   EY + + LRYGHLMIMTDQ                      
Sbjct: 534  SKNQEIQNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ---------------------- 571

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFY 608
                  DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPIVK    +     K  SF+
Sbjct: 572  ------DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIVKVWKGDPKNPTKQRSFF 625

Query: 609  SMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAI 668
            +MP+YEAW E    +   W  KYYKGLGTST+++ + YF+++  H K+F    D + E I
Sbjct: 626  TMPEYEAWAEE-HQHERGWDHKYYKGLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEAELI 684

Query: 669  ELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
            ELAFSKKK + RK+WL QF+PG  LD   + I Y+DF+NKELILFSMAD  RSIPS+VDG
Sbjct: 685  ELAFSKKKADERKEWLRQFKPGTFLDHSVEKITYTDFINKELILFSMADNVRSIPSVVDG 744

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKPGQRK+L+  F+RN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ FVGSNNI
Sbjct: 745  LKPGQRKVLYTCFRRNLKKDMKVVELAGHVSGMTAYQHGDVSLQQTIVGLAQTFVGSNNI 804

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            N L+P+G FG+R QGG D ASARYI+TRLSP  R +F   D+ LL Y  +DG+ IEP  Y
Sbjct: 805  NCLEPSGNFGSRLQGGSDCASARYIYTRLSPFARRIFHASDEPLLTYNVDDGKTIEPEVY 864

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            MP++P +L+NG++GIGTGWSS IPNYNP D+V N++RL+NGE ++PM PW+RGF G +  
Sbjct: 865  MPVVPMILINGADGIGTGWSSSIPNYNPEDVVDNLKRLMNGEEIKPMQPWFRGFTGEVTS 924

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQ 966
                  G  +  +GII+E  E  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ 
Sbjct: 925  I----GGDRFKFSGIIKETGEKEVEITELPIRTWTQDFKDKLEDIIKAEKTPSFIKDYKD 980

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
            Y+  T V F + + E+ +    +EGL +KFKLT TI+T+N+  FD +G I KY T + IL
Sbjct: 981  YNTHTKVHFVIQMDEKHLKSAVEEGLEEKFKLTKTIATTNLVAFDPEGRITKYATVDDIL 1040

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
            +EFF +RL++YE+RK+ QL  ++ EL KL N+ RF+  +++GE+VV+ +K+  L++EL+ 
Sbjct: 1041 KEFFAVRLKYYERRKQYQLNEMQKELEKLSNQARFVQMIIDGELVVSKKKKNVLVVELKD 1100

Query: 1087 KGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQG 1146
            KGF PFPK + + +A  A    E EE  E+ +  + + +  YDYLL MAI +LT E+V+ 
Sbjct: 1101 KGFKPFPKVADAAKAGEAEPAAEDEEESEDVDDTSNLSNA-YDYLLGMAIWSLTQERVER 1159

Query: 1147 LLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDELDKSDARAEEERMKIKGNG 1202
            L         E+D L K + E +W +DLD        QLD+        E  RM+   N 
Sbjct: 1160 LRRQIGDKEMEIDTLIKLSKEDIWKRDLDDFINEWRFQLDD--------EARRMRKVANM 1211

Query: 1203 NGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKA-PAEKL 1261
                  K++       ARK     ++    E             PK + G KKA P   L
Sbjct: 1212 GRRTSSKLMTAVGRGGARKRKAAKDDDSDDEDF---------AAPKTKRGPKKAEPKGTL 1262

Query: 1262 DDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKK 1321
                           + LN+  +S K +P+PD     +  +++V  KK   + + AA  K
Sbjct: 1263 H--------------SFLNK--SSPKPKPAPDDDDDDDDFEMEVMPKKNRGASKPAAPAK 1306

Query: 1322 VVTVETSDSEDEIIIDDDEAFEIAAPEEGKKGGRKAAGNSKAAKPAAETKKRGPAKK 1378
                ET +S+ EI+         AAP        KAA   KA  P +   K+ PAK+
Sbjct: 1307 EEEKETGESDVEILPKKSR----AAP--------KAASKVKAEDPDSTEVKKAPAKR 1351


>gi|134077492|emb|CAK96636.1| unnamed protein product [Aspergillus niger]
          Length = 1712

 Score = 1188 bits (3074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 657/1381 (47%), Positives = 877/1381 (63%), Gaps = 116/1381 (8%)

Query: 29   EMYQKKS-----QLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
            E YQK S     QLEHI+ RPDTYIGS+E+ TQ +W+Y  ES  M +R +SYVPGLYKIF
Sbjct: 134  EKYQKASISGLTQLEHIIKRPDTYIGSVERTTQQMWVYSSESDGMEYREVSYVPGLYKIF 193

Query: 84   DEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            DEI+VNAADNKQ D  M  ++V +D+E  +ISV N+G G+P+E+H +E +YVPELIFGHL
Sbjct: 194  DEIVVNAADNKQNDENMSEIRVTVDRESGVISVWNNGRGIPIEMHAKEKIYVPELIFGHL 253

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LTSSNYDD  +K TGGRNG+GAKL N+FSTEF IET D  + KKY+Q +T NM K  +  
Sbjct: 254  LTSSNYDDTQQKVTGGRNGFGAKLCNVFSTEFSIETQDSSQKKKYRQTWTENMTKIGKAK 313

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            I++ K G+++TKV+FKPD AKF M  ++DD  AL+K+RV DLAG     V V+LNG R+P
Sbjct: 314  ITEAK-GEDYTKVTFKPDYAKFGMDGMDDDFEALVKRRVYDLAGTA--KVNVKLNGTRIP 370

Query: 264  VKSFAEYVDMYPKSVTRFHER---------------VNERWEICVTLSEGQFQQVSFVNG 308
            ++ F +Y++MY K++ +  ER                + RWE+   +S+G FQQVSFVN 
Sbjct: 371  IRGFKKYMEMYTKAIRK--ERGDTGPAPKDEIITCSPDPRWEVGFAVSDGAFQQVSFVNS 428

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            IAT  GGTHV+Y+A+Q+ N +   V KKNKN A +K   ++NH+++FVNALI NPAF SQ
Sbjct: 429  IATTSGGTHVNYIADQICNRLAEQVKKKNKNGATLKTAQIRNHIFIFVNALIVNPAFTSQ 488

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
            TKE LT + S FGSKC L E+F KK+  K+ ++E +L +A  K  + LKK DG +   + 
Sbjct: 489  TKEQLTTKASQFGSKCVLDEDFYKKIL-KTAVMENILHFAQQKADQMLKKTDGGRRSRMN 547

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
               KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+A
Sbjct: 548  N-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDA 606

Query: 488  SSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            S +Q+  N EI NIK  LGL+   EY + + LRYGHLMIMTDQ                 
Sbjct: 607  SFDQISKNQEIQNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ----------------- 649

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---ATNKN-GK 603
                       DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPIVK      KN  K
Sbjct: 650  -----------DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIVKVWKGDPKNPTK 698

Query: 604  VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
              SF++MP+YEAW E    +   W  KYYKGLGTST+++ + YF+++  H K+F    D 
Sbjct: 699  QRSFFTMPEYEAWAEE-HQHERGWDHKYYKGLGTSTTEDAQVYFRDLDRHLKEFHTMQDN 757

Query: 664  DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIP 723
            + E IELAFSKKK + RK+WL QF+PG  LD   + I Y+DF+NKELILFSMAD  RSIP
Sbjct: 758  EAELIELAFSKKKADERKEWLRQFKPGTFLDHSVEKITYTDFINKELILFSMADNVRSIP 817

Query: 724  SMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFV 783
            S+VDGLKPGQRK+L+  F+RN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ FV
Sbjct: 818  SVVDGLKPGQRKVLYTCFRRNLKKDMKVVELAGHVSGMTAYQHGDISLQQTIVGLAQTFV 877

Query: 784  GSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQI 843
            GSNNIN L+P+G FG+R QGG D ASARYI+TRLSP  R +F   D+ LL Y  +DG+ I
Sbjct: 878  GSNNINCLEPSGNFGSRLQGGSDCASARYIYTRLSPFARRIFHASDEPLLTYNVDDGKTI 937

Query: 844  EPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFG 903
            EP  YMP++P +L+NG++GIGTGWSS IPNYNP D+V N++RL+NGE ++PM PW+RGF 
Sbjct: 938  EPEVYMPVVPMILINGADGIGTGWSSSIPNYNPEDVVDNLKRLMNGEEIKPMQPWFRGFT 997

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFI 961
            G +        G  +  +GII+E  E  + I ELPIR WTQD+++ LE II  ++  SFI
Sbjct: 998  GEVTSI----GGDRFKFSGIIKETGEKEVEITELPIRTWTQDFKDKLEDIIKAEKTPSFI 1053

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDT 1021
            + ++ Y+  T V F + + E+ +    +EGL +KFKLT TI+T+N+  FD +G I KY T
Sbjct: 1054 KDYKDYNTHTKVHFVIQMDEKHLKSAVEEGLEEKFKLTKTIATTNLVAFDPEGRITKYAT 1113

Query: 1022 PEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLL 1081
             + IL+EFF +RL++YE+RK+ QL  ++ EL KL N+ RF+  +++GE+VV+ +K+  L+
Sbjct: 1114 VDDILKEFFAVRLKYYERRKQYQLNEMQKELEKLSNQARFVQMIIDGELVVSKKKKNVLV 1173

Query: 1082 LELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTL 1141
            +EL+ KGF PFPK + + +A  A    E EE  E+ +  + + +  YDYLL MAI +LT 
Sbjct: 1174 VELKDKGFKPFPKVADAAKAGEAEPAAEDEEESEDVDDTSNLSNA-YDYLLGMAIWSLTQ 1232

Query: 1142 EKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDELDKSDARAEEERMK 1197
            E+V+ L         E+D L K + E +W +DLD        QLD+        E  RM+
Sbjct: 1233 ERVERLRRQIGDKEMEIDTLIKLSKEDIWKRDLDDFINEWRFQLDD--------EARRMR 1284

Query: 1198 IKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKAP 1257
               N       K++       ARK     ++    E             PK + G KKA 
Sbjct: 1285 KVTNMGRRTSSKLMTAVGRGGARKRKAAKDDDSDDEDF---------AAPKTKRGPKKAE 1335

Query: 1258 AEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRTA 1317
             +            L   L K     +S K +P+ D     +  +++V  KK   + + A
Sbjct: 1336 PKGT----------LHSFLNK-----SSPKPKPAADDDDDDDDFEMEVMPKKNRGASKPA 1380

Query: 1318 AQKKVVTVETSDSEDEIIIDDDEAFEIAAPEEGKKGGRKAAGNSKAAKPAAETKKRGPAK 1377
            A  K    ET +S+ EI+         AAP        KAA   KA  P +   K+ PAK
Sbjct: 1381 APAKEEEKETGESDVEILPKKSR----AAP--------KAASKVKAEDPDSTEVKKAPAK 1428

Query: 1378 K 1378
            +
Sbjct: 1429 R 1429


>gi|126341720|ref|XP_001380856.1| PREDICTED: DNA topoisomerase 2-beta [Monodelphis domestica]
          Length = 1756

 Score = 1188 bits (3074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1201 (51%), Positives = 819/1201 (68%), Gaps = 72/1201 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ++W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 185  SVERVYQKKTQLEHILLRPDTYIGSVEPLTQSMWVYDEDV-GMNCREVTFVPGLYKIFDE 243

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +K+ ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 244  ILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 303

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SEP + 
Sbjct: 304  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWVNNMMKTSEPKV- 362

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +GD++T ++F+PDL KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 363  KYFDGDDYTCITFQPDLLKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 421

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 422  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 481

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +Q+   ++ VV KKNK   +VK   VKNH+WVFVN LI+NP FDSQTKE +TL+ 
Sbjct: 482  VDYVVDQIVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNCLIENPTFDSQTKENMTLQP 541

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GI+E++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 542  KSFGSKCQLSEKFFK-AASNCGIIESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 600

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 601  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 660

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y +   +K+LRYG +MIMTDQ                      
Sbjct: 661  AEINNIIKIVGLQYKKSYEDAESLKTLRYGKIMIMTDQ---------------------- 698

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 699  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 750

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 751  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 809

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 810  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 869

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 870  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 929

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 930  NFVGSNNVNLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPSVDDNLLKFLYDDN 989

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WYMPIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 990  QRVEPEWYMPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 1049

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 1050 NFKGTIQEIGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 1105

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE +++ +  GL K FKL TT++ ++M LFD  G +
Sbjct: 1106 TPALISDYKEYHTDTTVKFVVKMTEEKLVQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1165

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1166 KKYETVQDILKEFFDLRLNYYSLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1225

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETE-ESEENPEVVNGVQSIDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +ET+ + +++          D++Y+L+M+
Sbjct: 1226 KRDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQRDDSSSDSGTTSGPDFNYILNMS 1285

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEER 1195
            +  LT EKV+ L+  RD    E++DL++ +P  LW +DL A    ++ELDK +A+  E+ 
Sbjct: 1286 LWCLTKEKVEELIKQRDTKGRELNDLKRKSPSDLWKEDLAAF---VEELDKVEAQEREDA 1342

Query: 1196 M 1196
            +
Sbjct: 1343 L 1343


>gi|291399726|ref|XP_002716252.1| PREDICTED: DNA topoisomerase II, beta isozyme-like [Oryctolagus
            cuniculus]
          Length = 1667

 Score = 1188 bits (3074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1204 (51%), Positives = 819/1204 (68%), Gaps = 72/1204 (5%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T+   ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+EE   M  R +++VPGLY
Sbjct: 88   TSKKLSVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEEV-GMNCREVTFVPGLY 146

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADNKQRD  M  +K+ ID E ++IS+ N+G G+PV  H+ E VYVP LIF
Sbjct: 147  KIFDEILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIF 206

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            G LLTSSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K S
Sbjct: 207  GQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTS 266

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
            E  I K  +G+++T ++F+PDLAKF M  L+ D+VALM +R  DLAG   K VKV  NG 
Sbjct: 267  EAKI-KHFDGEDYTCITFQPDLAKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGK 324

Query: 261  RVPVKSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATI 312
            ++PV  F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT 
Sbjct: 325  KLPVNGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATT 384

Query: 313  KGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
            KGG HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE 
Sbjct: 385  KGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKEN 444

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGIS 430
            +TL+  SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI 
Sbjct: 445  MTLQPKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIP 503

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KL+DAN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  
Sbjct: 504  KLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHK 563

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            Q++ N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                 
Sbjct: 564  QIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ----------------- 606

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSF 607
                       D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSF
Sbjct: 607  -----------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSF 653

Query: 608  YSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA 667
            YS+P+++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  A
Sbjct: 654  YSIPEFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAA 712

Query: 668  IELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSM 715
            I LAFSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS 
Sbjct: 713  ITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSN 772

Query: 716  ADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTI 775
            +D +RSIPS+VDG KPGQRK+LF    RN  +E KVAQ +G V+E SAYHHGEQ+L  TI
Sbjct: 773  SDNERSIPSLVDGFKPGQRKVLFTCLNRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTI 832

Query: 776  LGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDY 835
            + +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +
Sbjct: 833  VNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKF 892

Query: 836  LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPM 895
            L +D Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM
Sbjct: 893  LYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPM 952

Query: 896  HPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII 954
             P Y+ F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++
Sbjct: 953  LPNYKNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPML 1008

Query: 955  ---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFD 1011
               D+  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD
Sbjct: 1009 NGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFD 1068

Query: 1012 SKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIV 1071
              G +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I 
Sbjct: 1069 HMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKIT 1128

Query: 1072 VNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDY 1130
            + NR + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S  D++Y
Sbjct: 1129 IENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPSGPDFNY 1188

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            +L+M++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+
Sbjct: 1189 ILNMSLWSLTKEKVEELIKQRDTKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQ 1245

Query: 1191 AEEE 1194
              E+
Sbjct: 1246 ERED 1249


>gi|355725616|gb|AES08613.1| topoisomerase II beta 180kDa [Mustela putorius furo]
          Length = 1482

 Score = 1188 bits (3073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1205 (51%), Positives = 819/1205 (67%), Gaps = 78/1205 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 22   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 80

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 81   ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 140

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 141  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 199

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 200  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 258

Query: 266  SFAEYVDMYPKS--------------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
             F  YVD+Y K               +   HE  NERW++C+TLSE  FQQ+SFVN IAT
Sbjct: 259  GFRSYVDLYVKDKLDETGVALKVIHELXXIHELANERWDVCLTLSEKGFQQISFVNSIAT 318

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
             KGG HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE
Sbjct: 319  TKGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKE 378

Query: 371  TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGI 429
             +TL+  SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI
Sbjct: 379  NMTLQPKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGI 437

Query: 430  SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS 489
             KL+DAN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS 
Sbjct: 438  PKLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASH 497

Query: 490  NQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIF 546
             Q++ N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                
Sbjct: 498  KQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------- 541

Query: 547  AWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS 606
                        D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LS
Sbjct: 542  ------------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELS 587

Query: 607  FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
            FYS+P+++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  
Sbjct: 588  FYSIPEFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDA 646

Query: 667  AIELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFS 714
            AI LAFSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS
Sbjct: 647  AITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFS 706

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
             +D +RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  T
Sbjct: 707  NSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMT 766

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS ++R LFP  DD LL 
Sbjct: 767  IVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLSRLLFPAVDDNLLK 826

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            +L +D Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    P
Sbjct: 827  FLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHP 886

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESI 953
            M P Y+ F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE +
Sbjct: 887  MLPNYKNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPM 942

Query: 954  I---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
            +   D+  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LF
Sbjct: 943  LNGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLF 1002

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D  G +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I
Sbjct: 1003 DHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKI 1062

Query: 1071 VVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYD 1129
             + NR + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S  D++
Sbjct: 1063 TIENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPSGPDFN 1122

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            Y+L+M++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A
Sbjct: 1123 YILNMSLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEA 1179

Query: 1190 RAEEE 1194
            +  E+
Sbjct: 1180 QERED 1184


>gi|281341246|gb|EFB16830.1| hypothetical protein PANDA_016140 [Ailuropoda melanoleuca]
          Length = 1599

 Score = 1188 bits (3073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1199 (52%), Positives = 819/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 27   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 85

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 86   ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 145

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 146  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 204

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 205  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 263

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 264  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 323

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 324  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 383

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 384  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 442

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 443  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 502

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 503  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 540

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 541  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 592

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 593  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 651

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 652  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 711

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 712  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 771

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS ++R LFP  DD LL +L +D 
Sbjct: 772  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLSRLLFPAVDDNLLKFLYDDN 831

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 832  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 891

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 892  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 947

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 948  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1007

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1008 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1067

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S  D++Y+L+M+
Sbjct: 1068 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPSGPDFNYILNMS 1127

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELD  +A+  E+
Sbjct: 1128 LWSLTKEKVEELIKQRDSKGREVNDLKRKSPSDLWKEDLAAF---VEELDVVEAQERED 1183


>gi|431919412|gb|ELK17931.1| DNA topoisomerase 2-beta [Pteropus alecto]
          Length = 1606

 Score = 1188 bits (3073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1199 (52%), Positives = 818/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R I++VPGLYKIFDE
Sbjct: 33   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCRDITFVPGLYKIFDE 91

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 92   ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 151

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD  KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 152  SSNYDDEEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSESKI- 210

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +RV DLAG   K VKV  NG ++PV 
Sbjct: 211  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRVYDLAGSC-KGVKVIFNGKKLPVN 269

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 270  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 329

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 330  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 389

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             +FGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 390  KNFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 448

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 449  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 508

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 509  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 546

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 547  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 598

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 599  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 657

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 658  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 717

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 718  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 777

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 778  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARRLFPPVDDNLLKFLYDDN 837

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 838  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 897

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 898  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 953

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 954  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1013

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  R++  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1014 KKYETVQDILKEFFDLRLSYYGLRREWLVGMLGAESAKLNNQARFILEKIQGKITIENRS 1073

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S  D++Y+L+M+
Sbjct: 1074 KKDLIQMLVQRGYESDPVKAWKEAQEKATEEEETQNQHDDSSSDSGTPSGPDFNYILNMS 1133

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A     +ELDK +A+  E+
Sbjct: 1134 LWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---AEELDKVEAQERED 1189


>gi|350629974|gb|EHA18347.1| DNA topoisomerase II [Aspergillus niger ATCC 1015]
          Length = 1639

 Score = 1188 bits (3073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 656/1382 (47%), Positives = 878/1382 (63%), Gaps = 118/1382 (8%)

Query: 29   EMYQKKS-----QLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
            E YQK S     QLEHI+ RPDTYIGS+E+ TQ +W+Y  ES  M +R +SYVPGLYKIF
Sbjct: 61   EKYQKASISGLTQLEHIIKRPDTYIGSVERTTQQMWVYSSESDGMEYREVSYVPGLYKIF 120

Query: 84   DEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            DEI+VNAADNKQ D  M  ++V +D+E  +ISV N+G G+P+E+H +E +YVPELIFGHL
Sbjct: 121  DEIVVNAADNKQNDENMSEIRVTVDRESGVISVWNNGRGIPIEMHAKEKIYVPELIFGHL 180

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LTSSNYDD  +K TGGRNG+GAKL N+FSTEF IET D  + KKY+Q +T NM K  +  
Sbjct: 181  LTSSNYDDTQQKVTGGRNGFGAKLCNVFSTEFSIETQDSSQKKKYRQTWTENMTKIGKAK 240

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            I++ K G+++TKV+FKPD AKF M  ++DD  AL+K+RV DLAG     V V+LNG R+P
Sbjct: 241  ITEAK-GEDYTKVTFKPDYAKFGMDGMDDDFEALVKRRVYDLAGTA--KVNVKLNGTRIP 297

Query: 264  VKSFAEYVDMYPKSVTRFHER---------------VNERWEICVTLSEGQFQQVSFVNG 308
            ++ F +Y++MY K++ +  ER                + RWE+   +S+G FQQVSFVN 
Sbjct: 298  IRGFKKYMEMYTKAIRK--ERGDTGPAPKDEIITCSPDPRWEVGFAVSDGAFQQVSFVNS 355

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            IAT  GGTHV+Y+A+Q+ N +   V KKNKN A +K   ++NH+++FVNALI NPAF SQ
Sbjct: 356  IATTSGGTHVNYIADQICNRLAEQVKKKNKNGATLKTAQIRNHIFIFVNALIVNPAFTSQ 415

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
            TKE LT + S FGSKC L E+F KK+  K+ ++E +L +A  K  + LKK DG +   + 
Sbjct: 416  TKEQLTTKASQFGSKCVLDEDFYKKIL-KTAVMENILHFAQQKADQMLKKTDGGRRSRMN 474

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
               KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+A
Sbjct: 475  N-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDA 533

Query: 488  SSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            S +Q+  N EI NIK  LGL+   EY + + LRYGHLMIMTDQ                 
Sbjct: 534  SFDQISKNQEIQNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ----------------- 576

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GK 603
                       DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPIVK    +     K
Sbjct: 577  -----------DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIVKVWKGDPKNPTK 625

Query: 604  VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
              SF++MP+YEAW E    +   W  KYYKGLGTST+++ + YF+++  H K+F    D 
Sbjct: 626  QRSFFTMPEYEAWAEE-HQHERGWDHKYYKGLGTSTTEDAQVYFRDLDRHLKEFHTMQDN 684

Query: 664  DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIP 723
            + E IELAFSKKK + RK+WL QF+PG  LD   + I Y+DF+NKELILFSMAD  RSIP
Sbjct: 685  EAELIELAFSKKKADERKEWLRQFKPGTFLDHSVEKITYTDFINKELILFSMADNVRSIP 744

Query: 724  SMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFV 783
            S+VDGLKPGQRK+L+  F+RN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ FV
Sbjct: 745  SVVDGLKPGQRKVLYTCFRRNLKKDMKVVELAGHVSGMTAYQHGDISLQQTIVGLAQTFV 804

Query: 784  GSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQI 843
            GSNNIN L+P+G FG+R QGG D ASARYI+TRLSP  R +F   D+ LL Y  +DG+ I
Sbjct: 805  GSNNINCLEPSGNFGSRLQGGSDCASARYIYTRLSPFARRIFHASDEPLLTYNVDDGKTI 864

Query: 844  EPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFG 903
            EP  YMP++P +L+NG++GIGTGWSS IPNYNP D+V N++RL+NGE ++PM PW+RGF 
Sbjct: 865  EPEVYMPVVPMILINGADGIGTGWSSSIPNYNPEDVVDNLKRLMNGEEIKPMQPWFRGFT 924

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFI 961
            G +        G  +  +GII+E  E  + I ELPIR WTQD+++ LE II  ++  SFI
Sbjct: 925  GEVTSI----GGDRFKFSGIIKETGEKEVEITELPIRTWTQDFKDKLEDIIKAEKTPSFI 980

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDT 1021
            + ++ Y+  T V F + + E+ +    +EGL +KFKLT TI+T+N+  FD +G I KY T
Sbjct: 981  KDYKDYNTHTKVHFVIQMDEKHLKSAVEEGLEEKFKLTKTIATTNLVAFDPEGRITKYAT 1040

Query: 1022 PEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLL 1081
             + IL+EFF +RL++YE+RK+ QL  ++ EL KL N+ RF+  +++GE+VV+ +K+  L+
Sbjct: 1041 VDDILKEFFAVRLKYYERRKQYQLNEMQKELEKLSNQARFVQMIIDGELVVSKKKKNVLV 1100

Query: 1082 LELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTL 1141
            +EL+ KGF PFPK + + +A  A    E EE  E+ +  + + +  YDYLL MAI +LT 
Sbjct: 1101 VELKDKGFKPFPKVADAAKAGEAEPAAEDEEESEDVDDTSNLSNA-YDYLLGMAIWSLTQ 1159

Query: 1142 EKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDELDKSDARAEEERMK 1197
            E+V+ L         E+D L K + E +W +DLD        QLD+        E  RM+
Sbjct: 1160 ERVERLRRQIGDKEMEIDTLIKLSKEDIWKRDLDDFINEWRFQLDD--------EARRMR 1211

Query: 1198 IKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKA- 1256
               N       K++       ARK     ++    E             PK + G KKA 
Sbjct: 1212 KVANMGRRTSSKLMTAVGRGGARKRKAAKDDDSDDEDF---------AAPKTKRGPKKAE 1262

Query: 1257 PAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRT 1316
            P   L               + LN+  +S K +P+ D     +  +++V  KK   + + 
Sbjct: 1263 PKGTLH--------------SFLNK--SSPKPKPAADDDDDDDDFEMEVMPKKNRGASKP 1306

Query: 1317 AAQKKVVTVETSDSEDEIIIDDDEAFEIAAPEEGKKGGRKAAGNSKAAKPAAETKKRGPA 1376
            AA  K    ET +S+ EI+         AAP        KAA   KA  P +   K+ PA
Sbjct: 1307 AAPAKEEEKETGESDVEILPKKSR----AAP--------KAASKVKAEDPDSTEVKKAPA 1354

Query: 1377 KK 1378
            K+
Sbjct: 1355 KR 1356


>gi|348535612|ref|XP_003455293.1| PREDICTED: DNA topoisomerase 2-beta-like [Oreochromis niloticus]
          Length = 1603

 Score = 1188 bits (3073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1201 (51%), Positives = 823/1201 (68%), Gaps = 74/1201 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++E+   M  R I+YVPGLYKIFDE
Sbjct: 36   SVERVYQKKTQLEHILLRPDTYIGSVEPITQQMWVFDEDI-GMNQREITYVPGLYKIFDE 94

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M A+K+ ID E + IS+ N+G G+PV  H++E +YVP LIFGHLLT
Sbjct: 95   ILVNAADNKQRDKNMTAIKITIDPESNTISIWNNGKGIPVVEHKDEKMYVPALIFGHLLT 154

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD  KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SEP I 
Sbjct: 155  SSNYDDEEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYRHSFKQTWQNNMTKTSEPKI- 213

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            K  +GD++T V+F+PDL+KF M  L+ D+VAL+ +R  D+AG C G  VKV LNG ++PV
Sbjct: 214  KFFDGDDFTSVTFQPDLSKFKMEKLDKDIVALLTRRAYDVAGSCRG--VKVSLNGKKLPV 271

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
              F  YVD+Y K        ++   HE VN+RWE+C+T+SE  FQQ+SFVN IAT KGG 
Sbjct: 272  NGFRSYVDLYVKDKLDETGVALKVVHETVNDRWEVCLTMSEKGFQQISFVNSIATTKGGR 331

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            H+DYV +Q+   ++ VV KKNK   +VK   VKNH+WVFVNALI+NP+FDSQTKE +TL+
Sbjct: 332  HIDYVVDQIVAKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNALIENPSFDSQTKENMTLQ 391

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC LS++F++  T   GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 392  TKSFGSKCLLSDKFIRAAT-NCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDD 450

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREA+  Q++ 
Sbjct: 451  ANDAGGKHSSECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIME 510

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+    Y++   +++LRYG +MIMTDQ                     
Sbjct: 511  NAEINNIIKIVGLQYKKSYDDPESLRTLRYGKIMIMTDQ--------------------- 549

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINF H  WPSLLK  +FL EFITPIVKAT KN + L+FYS+P
Sbjct: 550  -------DQDGSHIKGLLINFFHHNWPSLLK-HTFLEEFITPIVKAT-KNKQELAFYSIP 600

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK+    N  +W IKYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LA
Sbjct: 601  EFDEWKKHTE-NYKTWHIKYYKGLGTSTSKEAKEYFADMEKHRITFRYTGAEDDAAITLA 659

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKK + RK+WL  F            P  +L     +++ Y+DF+NKELILFS +D +
Sbjct: 660  FSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGTHARHLSYNDFINKELILFSNSDNE 719

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDGLKPGQRK+LF   KRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 720  RSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 779

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNN+N+LQP GQFGTR  GGKDAAS RYIFT LSP+ + LFP  D  LL +L +D
Sbjct: 780  QNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPAVDSNLLKFLYDD 839

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VLVNG+EGIGTGW+  IPNY+PR+IV N+ R+LN +   PM P Y
Sbjct: 840  NQKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDPREIVNNINRMLNHQDPLPMLPSY 899

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F G I +    +    Y V+G +  +++ T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 900  KNFKGVIHELGQNQ----YLVSGEVSVIDKNTIEITELPVRTWTQAYKESVLEPMLQGTD 955

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  + I  +++Y  D TV F V +SEE + + +  GL K FKL ++++ ++M LFD  G 
Sbjct: 956  KTPALINDYKEYHTDATVKFVVRMSEEKLAQAEAAGLHKVFKLQSSLTCNSMVLFDHMGC 1015

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +K+YD+ + IL+EFF +RL + + RK   L +L  E  KL N+ RF+L  + G+IV+ N+
Sbjct: 1016 LKRYDSVQDILKEFFELRLHYCKLRKDWLLGSLGAEAAKLSNQARFVLEKIEGKIVIENK 1075

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
             + +L+  L QKG+   P  + +     +   D  + +E +  V +G  S  +++Y+L+M
Sbjct: 1076 SKRELIRMLVQKGYESDPVAAWTKAQEKSQEEDYKDGNESDSSVDSGSTSGPNFNYILNM 1135

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
             +  LT EKV  LL  RD+   E++DL+K +PE LW +DL      ++ELD  +A+  EE
Sbjct: 1136 PLWCLTKEKVDELLKQRDQKRGELNDLQKKSPEDLWKEDLTVF---IEELDNVEAQEREE 1192

Query: 1195 R 1195
            +
Sbjct: 1193 Q 1193


>gi|345317767|ref|XP_001519680.2| PREDICTED: DNA topoisomerase 2-alpha, partial [Ornithorhynchus
            anatinus]
          Length = 1764

 Score = 1187 bits (3072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 621/1217 (51%), Positives = 821/1217 (67%), Gaps = 82/1217 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++E++  +  R +++VPGLYKIFDE
Sbjct: 274  SVERIYQKKTQLEHILLRPDTYIGSVELLTQQMWVFDEDA-GLNCRDVTFVPGLYKIFDE 332

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD KM  +KV ID E++ ISV N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 333  ILVNAADNKQRDNKMSCIKVTIDPENNTISVWNNGKGIPVVEHKVEKVYVPALIFGQLLT 392

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ +T+NMGK  E  + 
Sbjct: 393  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYRKLFKQTWTDNMGKAGEMKL- 451

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDLAKF MT L+ D+VALM +R  D+AG   K VKV LNG R+PVK
Sbjct: 452  KPFDGEDYTCITFQPDLAKFKMTSLDKDIVALMSRRAYDIAGST-KDVKVFLNGKRLPVK 510

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K         +   HE VN RWE+C+T+SE  FQQVSFVN IAT KGG H
Sbjct: 511  GFRGYVDLYVKDKVDETGNPLKVIHEEVNSRWEVCLTMSEKGFQQVSFVNSIATSKGGRH 570

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+ + ++ VV KKNK    VK H VKNH+W+FVN+LI+NP FDSQTKE +TL+ 
Sbjct: 571  VDYVADQIISKLIEVVKKKNKGGVAVKPHQVKNHMWIFVNSLIENPTFDSQTKENMTLQA 630

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F+K   A  G+VE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 631  KSFGSKCQLSEKFIK-AAASCGVVESILNWVKFKAQIQLNKKCSAVKHNRIKGIPKLDDA 689

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG +NS  CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 690  NDAGSKNSTDCTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKMLNVREASHKQIMEN 749

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 750  AEINNIIKIVGLQYKKNYDDQDSLKTLRYGKIMIMTDQ---------------------- 787

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + +N + +SFYS+P+
Sbjct: 788  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-RNKQEMSFYSLPE 839

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S G +   W +KYYKGLGTSTSKE KEYF ++T H+  F +   +D  AI LAF
Sbjct: 840  FEEWKNSTG-DHKKWKVKYYKGLGTSTSKEAKEYFSDMTRHRIQFKYSGPEDDAAISLAF 898

Query: 673  SKKKIEARKKWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  K   Y+ Y+DF+NKELILFS +D +R
Sbjct: 899  SKKQIDDRKEWLTHFMEDRRQRKLHGLPEDYLYGKATNYLTYNDFINKELILFSNSDNER 958

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  F+RN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 959  SIPSMVDGLKPGQRKVLFTCFRRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 1018

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L +L +D 
Sbjct: 1019 NFVGSNNVNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPVKDDNTLKFLYDDN 1078

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PI+P VLVNG+EGIGTGWS  +PNY+ R++V N+RR+++GE   PM P Y+
Sbjct: 1079 QRVEPEWYIPIVPMVLVNGAEGIGTGWSCKLPNYDVREVVNNIRRMMDGEEPLPMLPSYK 1138

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++ A  +    Y + G +  ++ TT+ I ELP+R WTQ Y+E  LE ++   ++
Sbjct: 1139 NFKGTIDELAPNQ----YVINGEVSILDSTTIEISELPVRTWTQVYKEQVLEPMLNGTEK 1194

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +R+Y  DTTV F V ++E+ +   +  GL K FKL T ++ ++M LFD  G +
Sbjct: 1195 TPALIVDYREYHTDTTVKFIVKMTEQKLAEAEAAGLHKVFKLQTNLTCNSMVLFDHVGCL 1254

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  +  L  E  +L N+ RFIL  + G+IV+ N+ 
Sbjct: 1255 KKYDTALDILRDFFELRLKYYGLRKEWLVGMLGAESARLNNQARFILEKIEGKIVIENKP 1314

Query: 1077 RTDLLLELRQKGFTPFP---------KNSKSIEAVVAGATDETEESEENPEVVNGVQSID 1127
            + +L+  L Q+G+   P         K S   E   +    ETE+SE            D
Sbjct: 1315 KKELIKVLIQRGYDSDPVKAWKEAQQKGSGEEENEDSENEKETEKSES-----TSATGPD 1369

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKS 1187
            ++YLL M +  LT EK   L   RD   +E++ L++ +P  LW +DL A   +L+ ++  
Sbjct: 1370 FNYLLEMPLWYLTKEKKDELCRQRDNKTQELETLKRKSPADLWKEDLAAFVEELEAVETR 1429

Query: 1188 DARAEEERMKIKGNGNG 1204
            + + E+  +  K    G
Sbjct: 1430 EKQDEQAGLSGKATKGG 1446


>gi|357628633|gb|EHJ77901.1| DNA topoisomerase 2 [Danaus plexippus]
          Length = 1545

 Score = 1187 bits (3072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/1269 (50%), Positives = 833/1269 (65%), Gaps = 113/1269 (8%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEI 86
            IE++YQKKSQLEHILLRPDTYIGS+E+ T+ +W+Y++E + M+ R ++YVPGLYKI+DEI
Sbjct: 30   IEKIYQKKSQLEHILLRPDTYIGSVERSTETMWVYDKEKECMVQRELTYVPGLYKIYDEI 89

Query: 87   LVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
            LVNAADNKQRDPKMD +K+ I+QE + ISV+N+G G+PV +H++E ++VP +IFGHLLTS
Sbjct: 90   LVNAADNKQRDPKMDVIKIDINQEQNTISVYNNGCGIPVVMHKDEKMFVPTMIFGHLLTS 149

Query: 147  SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            SNY+D  +K TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NM K SEP + +
Sbjct: 150  SNYNDEEEKVTGGRNGYGAKLCNIFSTKFTVETASKQYKKHFKQTWGSNMTKASEPKVKE 209

Query: 207  CKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
              + D++TKV+F PDLAKF M  LEDD+VALM +R  D+A      VKV LNG R+ +  
Sbjct: 210  SGKDDDFTKVTFSPDLAKFKMDKLEDDIVALMSRRAYDVAAST-TGVKVYLNGERLKINK 268

Query: 267  FAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
            F +Y+D+Y K         +   +E+VN+RWE+ +TLS+  FQQVSFVN IAT KGG HV
Sbjct: 269  FKDYIDLYIKGKEDENGQPLKVVYEKVNDRWEVALTLSDRGFQQVSFVNSIATTKGGKHV 328

Query: 319  DYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQS 377
            D VA+ V  +V+ V+ KKNK   N+K   VK H+WVF+N LI NP FDSQTKE +TL+  
Sbjct: 329  DTVADSVVKNVLEVLKKKNKGGVNIKPFQVKTHMWVFINCLIVNPTFDSQTKENMTLQAK 388

Query: 378  SFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANL 437
            SFGSKC  SE+F+  VT KSG+VE++L+WA FK   +L K  G K   ++GI KLEDAN 
Sbjct: 389  SFGSKCNFSEKFINAVT-KSGLVESVLTWAKFKAQNELVKASGKKQSKLKGIPKLEDAND 447

Query: 438  AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
            AG +N+  CTLILTEGDSAK LA++GLSVVGRD +GVFPL+GK LNVR+AS  QVL N E
Sbjct: 448  AGTKNAHLCTLILTEGDSAKTLAVSGLSVVGRDHYGVFPLKGKPLNVRDASHKQVLENVE 507

Query: 498  IGNIKKILGLKQGVEYNNV---KSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
            I N+ KI+GL+   +YN+V   KSLRYG +MIM DQ                        
Sbjct: 508  INNLIKIVGLQYKKKYNSVDDLKSLRYGKVMIMADQ------------------------ 543

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYE 614
                D DGSHIKGL+INFIH  WP LLK+P FL EFITPIVKAT K+ K  SFYS+P++E
Sbjct: 544  ----DQDGSHIKGLIINFIHHNWPELLKLP-FLEEFITPIVKATKKD-KEFSFYSLPEFE 597

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
             WK     N  +++IKYYKGLGTSTSKE KEYFQN+  H+  F +    D   IELAFSK
Sbjct: 598  EWKRETD-NHHTYNIKYYKGLGTSTSKEAKEYFQNMDRHRIRFRYSGPTDDHHIELAFSK 656

Query: 675  KKIEARKKWLLQFEPGNHLDQ---------KEKY--------IKYSDFVNKELILFSMAD 717
            K  + RK+WL      NH+D+          E+Y        + YSDFVN EL+LFS  D
Sbjct: 657  KGADQRKEWLT-----NHMDEVKRRKEIGLPERYLYTKETKAVTYSDFVNLELVLFSNGD 711

Query: 718  LQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHG---------- 767
              RSIPSM+DGLKPGQRK++F   KRN  +E KVAQ +G V+EHSAYHHG          
Sbjct: 712  NVRSIPSMMDGLKPGQRKVIFTCIKRNDKREVKVAQLAGSVAEHSAYHHGRRMGPEFIAR 771

Query: 768  --EQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLF 825
                SLA TI+ +AQ++VGSNNINLL+P GQFGTR  GGKD+AS RYIFT +SP+TR +F
Sbjct: 772  HFHHSLAMTIVNLAQNYVGSNNINLLEPRGQFGTRLCGGKDSASPRYIFTLMSPLTRLVF 831

Query: 826  PKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRR 885
               DD LL +  ED Q+IEP  Y+PI+P VLVNG+EGIGTGWS+ IPNYNPRDIVAN+RR
Sbjct: 832  HPHDDPLLVHEFEDNQKIEPIHYVPILPMVLVNGAEGIGTGWSTKIPNYNPRDIVANIRR 891

Query: 886  LLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQD 945
            +L+GE   PMHPWY+ F GTIE    K     Y ++G    +    + I ELP+  WTQ+
Sbjct: 892  MLDGEDPVPMHPWYKNFRGTIESFGDK-----YVISGEAAILPNEKIEITELPVGTWTQN 946

Query: 946  YRE-FLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTI 1002
            Y+E  LE ++  D+    I  +R+Y+ DTTV F V L    +   + EG+ K FKL TTI
Sbjct: 947  YKENVLEPMLGTDKVKPLISEYREYNTDTTVRFVVTLLPGKLAEVEAEGIHKVFKLQTTI 1006

Query: 1003 STSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFI 1062
            S + M+ FD    +KKYD  E++L EF+ IRL +Y +RK+     L+ E  KL N+ RFI
Sbjct: 1007 SMTCMNAFDHNNCLKKYDKVEEVLHEFYGIRLRYYARRKEWLEGQLQAEADKLSNQARFI 1066

Query: 1063 LGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-----KNSKSIEAVVAGATDETEESEENP 1117
            L   +  +VV N+KR  L+ EL ++G+ P P     K +  ++ + A   +   E E   
Sbjct: 1067 LEKCDKGLVVENKKRKVLVEELIKRGYAPDPIADWKKRASKMQGLTAVEEEPESEEELEQ 1126

Query: 1118 EVVNGVQSID-------------YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKA 1164
            E V G +S D             ++YLL M++  LT EK   LL  RD+   E++ L+  
Sbjct: 1127 EEVKG-KSADPEKVFQQLKEVKKFNYLLGMSMWMLTKEKKDELLKQRDQKLTELETLKAK 1185

Query: 1165 TPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDK 1224
            TP  LW +DLD+  ++LDE++      E+ER+  + N N      + A +  + +  +  
Sbjct: 1186 TPAMLWREDLDSFLIKLDEVE------EQERLD-ESNTNKKTSKALAANKKNRKSIMDIV 1238

Query: 1225 KSNNARATE 1233
             S+N R  E
Sbjct: 1239 PSDNGRRVE 1247


>gi|426256620|ref|XP_004021936.1| PREDICTED: DNA topoisomerase 2-beta [Ovis aries]
          Length = 1652

 Score = 1187 bits (3072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1199 (52%), Positives = 818/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 82   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 140

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 141  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 200

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 201  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 259

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 260  KHFDGEDYTCITFQPDLSKFKMEKLDRDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 318

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 319  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 378

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 379  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 438

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 439  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 497

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 498  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 557

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 558  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 595

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 596  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 647

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 648  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 706

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 707  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 766

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 767  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 826

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 827  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDDN 886

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 887  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 946

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 947  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 1002

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V +SEE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 1003 TPALISDYKEYHTDTTVKFVVKMSEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1062

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1063 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1122

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +E++   ++    +G  S  D++Y+L+M+
Sbjct: 1123 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEESQNQHDDSSSDSGTPSGPDFNYILNMS 1182

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1183 LWSLTKEKVEELIKQRDAKGREVSDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1238


>gi|18369812|dbj|BAB84101.1| DNA topoisomerase II [Aspergillus fumigatus]
          Length = 1495

 Score = 1187 bits (3072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/1178 (51%), Positives = 809/1178 (68%), Gaps = 67/1178 (5%)

Query: 22   APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
            A +    E YQK +QLEHI+ RPDTYIGS+E+ TQ +W+Y+ E++ M ++ +SYVPGLYK
Sbjct: 49   ATSTNASEKYQKLTQLEHIIKRPDTYIGSVERTTQFMWVYDSETEGMKYKEVSYVPGLYK 108

Query: 82   IFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            IFDEI+VNAADNKQ D  MD ++V ID+E   ISV N+G G+P+EIH +EG+YVPELIFG
Sbjct: 109  IFDEIVVNAADNKQNDANMDEIRVTIDRESGEISVWNNGRGIPIEIHAKEGIYVPELIFG 168

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            HLLTSSNYDD  KK TGGRNG+GAKL N+FSTEF IET D ++ KKYKQ +TNNM K  +
Sbjct: 169  HLLTSSNYDDTQKKVTGGRNGFGAKLCNVFSTEFTIETQDSRQKKKYKQTWTNNMSKMGK 228

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
              I+  K G+++TKV+ KPD AKF M  ++DD  AL+K+RV DLAG     V V+LNG R
Sbjct: 229  AKITDAK-GEDYTKVTCKPDYAKFGMEGMDDDFEALVKRRVYDLAGTT--KVAVKLNGSR 285

Query: 262  VPVKSFAEYVDMYPKSVTRFHERVNE---------------RWEICVTLSEGQFQQVSFV 306
            +PV++F +Y++MY K++ R  ER  E               RWEI   +S+G F QVSFV
Sbjct: 286  IPVRNFKKYMEMYTKAIRR--ERGEEDTNAKDEIITCSPDPRWEIGFAVSDGSFHQVSFV 343

Query: 307  NGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFD 365
            N IAT  GGTHV+Y+A+Q+   +   V KKNKN A +K   ++NH+++FVNALI NPAF 
Sbjct: 344  NSIATTSGGTHVNYIADQICARLADQVKKKNKNGATLKPAQIRNHIFIFVNALIVNPAFT 403

Query: 366  SQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED 425
            SQTKE LT + S FGSKC L E+F KK+  ++ ++  +L +A  K  + LKK DG +   
Sbjct: 404  SQTKEQLTTKSSQFGSKCVLEEDFYKKIL-RTEVMNNILHFAQAKADQLLKKTDGGRRTR 462

Query: 426  VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
            +    KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR
Sbjct: 463  MNN-PKLVDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVR 521

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
            +AS  Q+  N EI NIK  LGL+   EY + + LRYGHLMIMTDQ               
Sbjct: 522  DASFEQISKNQEIQNIKNFLGLQHKKEYTHTRGLRYGHLMIMTDQ--------------- 566

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN---- 601
                         DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPI K    +    
Sbjct: 567  -------------DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIAKVWKGDPKNP 613

Query: 602  GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWED 661
             K  SF++MP+YEAWKE    +   W  KYYKGLGTST+++ + YF+++  H K+F    
Sbjct: 614  TKQHSFFTMPEYEAWKED-HKHDRGWEHKYYKGLGTSTTEDAQVYFRDLDRHLKEFHTLQ 672

Query: 662  DQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
            D + E IELAFSKKK + RK+WL QF+PG  LD     I Y+DF+NKELILFSMAD QRS
Sbjct: 673  DHETELIELAFSKKKADERKEWLRQFKPGTFLDHSVDKITYTDFINKELILFSMADNQRS 732

Query: 722  IPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQD 781
            IPS+VDGLKPGQRK+L+  F+RN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ 
Sbjct: 733  IPSVVDGLKPGQRKVLYTCFRRNLRKDMKVVELAGHVSGMTAYQHGDASLQQTIVGLAQT 792

Query: 782  FVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQ 841
            FVGSNNIN L+P+G FG+R QGG+D ASARYI+TRLSP  R +F   DD LL Y  +DG+
Sbjct: 793  FVGSNNINCLEPSGNFGSRLQGGQDCASARYIYTRLSPFARRVFHAADDPLLTYNEDDGK 852

Query: 842  QIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRG 901
            +IEP  Y+P++P +L+NG++GIGTGWSS IPNYNP DIV N++RL++G+ ++PM PW+RG
Sbjct: 853  KIEPEVYVPVVPMILINGADGIGTGWSSSIPNYNPEDIVDNLKRLMDGQPVKPMQPWFRG 912

Query: 902  FGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDS 959
            F G +    +   G  +  +GII+E  +  + I ELPIR WTQD+++ LE II  ++  S
Sbjct: 913  FTGEV----TALGGDRFKFSGIIKETGDKEVEITELPIRTWTQDFKDKLEEIIKAEKTPS 968

Query: 960  FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKY 1019
            FI+ ++ Y+  T V F + + E+++   ++EGL +KFKL+ TI+T+N+  FD +G I KY
Sbjct: 969  FIKDYKDYNTHTKVHFVIQMDEKNLQSAREEGLEEKFKLSKTIATTNLVAFDPEGRITKY 1028

Query: 1020 DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTD 1079
             + + IL+EF+ +RL+FYE+RK+ QL  L+ EL KL N+ RF+  +++G++V++ +K+  
Sbjct: 1029 ASVDDILKEFYAVRLKFYERRKQYQLNELQKELDKLTNQARFVQMIIDGDLVISKKKKPA 1088

Query: 1080 LLLELRQKGFTPFPKNSKSIEAVVAG--ATDETEESEENPEVVNGVQSIDYDYLLSMAIG 1137
            L+ EL++ GF  FP   K I+AV AG  A    EE +E+      V S  YDYLL M + 
Sbjct: 1089 LVAELKKHGFKAFP---KVIDAVKAGEDAPVVEEEEDESGNDETEVLSSAYDYLLGMPLW 1145

Query: 1138 TLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            +LT E+V+ L     +   E+D L K + E +W +DLD
Sbjct: 1146 SLTHERVEKLRRQIGEKEVEIDALIKLSKEDIWKRDLD 1183


>gi|336378314|gb|EGO19472.1| hypothetical protein SERLADRAFT_453445 [Serpula lacrymans var.
            lacrymans S7.9]
          Length = 1467

 Score = 1187 bits (3072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1268 (48%), Positives = 828/1268 (65%), Gaps = 99/1268 (7%)

Query: 18   VGPTAPN---------KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTM 68
             GP+ P          KT  E Y K SQLEHIL RPD+YIGS+E  TQALW Y+ ++K M
Sbjct: 78   AGPSQPKPTVAKNGKKKTASETYTKLSQLEHILKRPDSYIGSVETITQALWTYDADTKRM 137

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIH 128
            +HR + YVPG +KI DEILVNAADNK  D  MD +KV ID ++  ISV N+G G+P+E+H
Sbjct: 138  VHRELKYVPGFFKIVDEILVNAADNKINDKTMDTLKVTIDVDNSTISVFNNGRGIPIEMH 197

Query: 129  QEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKY 188
              E +Y+PELIFGHLL+SSNYDD+ KK TGGRNGYGAKL NI+S EF I+TAD    +KY
Sbjct: 198  STEKMYIPELIFGHLLSSSNYDDDEKKLTGGRNGYGAKLANIYSHEFTIDTADKNSSQKY 257

Query: 189  KQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGC 248
            KQ +TNNM    +  I+K  + + +T+V+F+PDL +F M  +++D V+L+KKRV D+AG 
Sbjct: 258  KQTWTNNMSNVGKAKITKNSKNEEYTRVTFRPDLKRFGMDSIDEDTVSLLKKRVYDMAGT 317

Query: 249  LGKSVKVELNGHRVPVKSFAEYVDMYPKSV----------------TRFHERVNERWEIC 292
            + + VKV LN  R+ +K+F +YV++Y  SV                T  HE+V  RWE+ 
Sbjct: 318  I-RDVKVFLNDERLKIKNFKQYVELYLNSVAAEAAEASGGAAQAKPTVIHEQVGPRWEVA 376

Query: 293  VTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLW 352
              +S+G FQQVSF N IAT KGGTHV  +++Q+A +++A + KKNK A VK   +KNH+W
Sbjct: 377  FAVSDGSFQQVSFANSIATTKGGTHVTLISDQLAKNLIAAITKKNKAATVKPAQIKNHMW 436

Query: 353  VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS 412
            +FVNALI+NP FDSQTKETLTL    FG+K  LSEEF+KKV  KS I++ +L+WA FK  
Sbjct: 437  IFVNALIENPTFDSQTKETLTLPAGKFGTKPVLSEEFMKKV-QKSTIIDNILNWAKFKAD 495

Query: 413  KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF 472
            + +KK DG+K   + G+ KL DAN AG RN+E+CTLILTE                 D F
Sbjct: 496  QQIKKTDGSKRNRLTGLPKLADANNAGTRNAEKCTLILTE-----------------DNF 538

Query: 473  GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVL 532
            GVFPLRGKLLNVREA  +Q++ N EI NIKKI+GL+    Y+ + SLRYG LMIMTDQ  
Sbjct: 539  GVFPLRGKLLNVREAKHDQIMKNEEIQNIKKIMGLQHNKVYSGIGSLRYGRLMIMTDQ-- 596

Query: 533  LAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 592
                                      DHDGSHIKGLLINF+  F+PSLLKIP+FLVEF+T
Sbjct: 597  --------------------------DHDGSHIKGLLINFLDHFFPSLLKIPNFLVEFVT 630

Query: 593  PIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITL 652
            PIV+ + K  + + F+++P+YE W E    +A  W  KY+KGLGTS+  + + YF N+  
Sbjct: 631  PIVRVS-KGKQRIDFFTIPEYEQWVEDTP-DAHKWDAKYFKGLGTSSDSDARLYFSNMAK 688

Query: 653  HKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELIL 712
            H   F    D D E IELAFSKKK + RK+WL QF+ G +LD     I YSDF+N+ELIL
Sbjct: 689  HMIPFAATQDGDKELIELAFSKKKADERKEWLRQFKAGTYLDHNIDEISYSDFINRELIL 748

Query: 713  FSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLA 772
            FSMAD  RSIP++ DGLKPGQRK+++  FKR   KE KVAQ  GY+SE +AYHHGE SL 
Sbjct: 749  FSMADNIRSIPALADGLKPGQRKVIWGCFKRKLKKEIKVAQLVGYISEVAAYHHGEASLT 808

Query: 773  STILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKL 832
             TI+ +AQD+VGSNN+NLL PNGQ+GTR+QGGKD ASARYIFT LSP+ R ++   DD L
Sbjct: 809  MTIVNLAQDYVGSNNVNLLLPNGQYGTRDQGGKDHASARYIFTELSPLARTIYNPADDPL 868

Query: 833  LDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMM 892
            L YL ED   IEP +Y+P+IP VL+NG+EGIGTGWS+ IP YNP DIV N+RR++ GE +
Sbjct: 869  LTYLKEDNDWIEPEYYLPVIPLVLINGAEGIGTGWSTSIPCYNPEDIVNNIRRMMAGEEL 928

Query: 893  EPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLES 952
             PM PW+RGF GTI+K    +    Y V G+  ++N+TT+ I ELPI +WTQ+Y+  LE+
Sbjct: 929  VPMLPWWRGFKGTIKKVGDYK----YDVIGVARKINDTTVEITELPIHKWTQNYKAELEA 984

Query: 953  II-DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFD 1011
            +I ++ +  I+ ++++ D+  + F + +S + + + +++GL + FKLT+ I+TSNM  F+
Sbjct: 985  MIGEKGEGIIKDYKEHHDNVNIHFVITMSPKDLEKAEEQGLTEFFKLTSKINTSNMICFN 1044

Query: 1012 SKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIV 1071
              G I+KY TPE+I+EEFF  RL  Y+ RK      L+ +  +L N+ RF+  +V+ E++
Sbjct: 1045 LDGKIQKYQTPEEIIEEFFPKRLACYQSRKDYLANELQTQFERLSNQARFVKMIVDKELI 1104

Query: 1072 VNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYL 1131
            V NRK+ D++ ELR+  F PFPK  K+  A  A   +E E+   N        S DYDYL
Sbjct: 1105 VANRKKADIISELRKLKFRPFPKVVKAKAAGEAEDAEEEEDETSN-------TSTDYDYL 1157

Query: 1132 LSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARA 1191
            L MAI +LT EK++ LL    +   E+  L + TP  +W +D   LDM + E  K+  + 
Sbjct: 1158 LGMAIWSLTSEKIEKLLQQAQEKEAELLILLERTPVKMWNED---LDMFMAEWQKNCEQW 1214

Query: 1192 EEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRA 1251
            E + + +  NG      ++  K+A    RK+       +A  +    D+    VKPK   
Sbjct: 1215 ENKSL-LDANGK-----RVKRKQATLETRKSLSGPGKKKAHAS----DDSDYDVKPKKAP 1264

Query: 1252 GLKKAPAE 1259
               + PAE
Sbjct: 1265 AKPRKPAE 1272


>gi|348588584|ref|XP_003480045.1| PREDICTED: DNA topoisomerase 2-beta-like [Cavia porcellus]
          Length = 1991

 Score = 1187 bits (3071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1199 (52%), Positives = 818/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+++   M  R +++VPGLYKIFDE
Sbjct: 417  SVERVYQKKTQLEHILLRPDTYIGSVEPLTQMMWVYDDDV-GMNCREVTFVPGLYKIFDE 475

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 476  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 535

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 536  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 594

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 595  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 653

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 654  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 713

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 714  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 773

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 774  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 832

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 833  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 892

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 893  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 930

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 931  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 982

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 983  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 1041

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 1042 SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 1101

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 1102 SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 1161

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 1162 NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 1221

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L G    PM P Y+
Sbjct: 1222 QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLEGLDPHPMLPNYK 1281

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 1282 NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 1337

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 1338 TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1397

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1398 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESAKLNNQARFILEKIQGKITIENRS 1457

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S  D++Y+L+M+
Sbjct: 1458 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPSGPDFNYILNMS 1517

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1518 LWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1573


>gi|359080606|ref|XP_002698796.2| PREDICTED: DNA topoisomerase 2-beta [Bos taurus]
          Length = 1707

 Score = 1187 bits (3071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1199 (52%), Positives = 818/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 137  SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 195

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 196  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 255

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 256  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 314

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 315  KHFDGEDYTCITFQPDLSKFKMEKLDRDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 373

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 374  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 433

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 434  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 493

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 494  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 552

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 553  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 612

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 613  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 650

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 651  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 702

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 703  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 761

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 762  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 821

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 822  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 881

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 882  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDDN 941

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 942  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 1001

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 1002 NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 1057

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 1058 TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1117

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1118 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1177

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +E++   ++    +G  S  D++Y+L+M+
Sbjct: 1178 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEESQNQHDDSSSDSGTPSGPDFNYILNMS 1237

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1238 LWSLTKEKVEELIKQRDAKGREVSDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1293


>gi|302500519|ref|XP_003012253.1| hypothetical protein ARB_01513 [Arthroderma benhamiae CBS 112371]
 gi|291175810|gb|EFE31613.1| hypothetical protein ARB_01513 [Arthroderma benhamiae CBS 112371]
          Length = 1680

 Score = 1187 bits (3071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 667/1438 (46%), Positives = 904/1438 (62%), Gaps = 110/1438 (7%)

Query: 15   ANVVGPTAPNKTIE-----EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI 69
            ANV   +   +T+E     E YQK +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M 
Sbjct: 109  ANVENGSFATETVEGGGSSEKYQKITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELME 168

Query: 70   HRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQ 129
            +R +S+VPGLYKIFDEILVNAADNKQ DP M  ++V +D+E   ISV N+G G+PVEIH+
Sbjct: 169  YREVSFVPGLYKIFDEILVNAADNKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHK 228

Query: 130  EEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYK 189
            +E +Y+PELIFGHLLTSSNY+D  +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K
Sbjct: 229  KEQIYIPELIFGHLLTSSNYNDMQEKVTGGRNGYGAKLCNIFSNEFTVETADSKQKKKFK 288

Query: 190  QVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCL 249
              +TNNM    +  I++CK GD++TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  
Sbjct: 289  LTWTNNMSTMGKAKITECK-GDDYTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTC 347

Query: 250  GKSVKVELNGHRVPVKSFAEYVDMYPKSVTR---------------FHERVNERWEICVT 294
            G +VK  LNG R+P+KSF +Y++MY K++                   E  + RWEI  T
Sbjct: 348  GTAVK--LNGTRIPIKSFKKYMEMYTKAIKAERGEDPTSASDKNDIITESPDRRWEIGFT 405

Query: 295  LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWV 353
            +S+G FQQVSFVN IAT  GGTHV+Y+++Q+ N +   + KKNK  A +KA  +KNH+++
Sbjct: 406  VSDGSFQQVSFVNSIATTSGGTHVNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFL 465

Query: 354  FVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSK 413
            FVN+ I NPAF SQTKE LT R S FGSKC +S++FLKKV  K+ +++ +L +A  K  +
Sbjct: 466  FVNSQIVNPAFTSQTKEQLTTRPSQFGSKCVVSDDFLKKVM-KTRVMDDILHFAEKKADQ 524

Query: 414  DLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFG 473
             LKK DG +   +    KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FG
Sbjct: 525  ILKKTDGNRRSRMNN-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFG 583

Query: 474  VFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLL 533
            VFPLRGKLLNVR+AS +Q+  N+EI NIK  +GL+   EY + + LRYGHLMIMTDQ   
Sbjct: 584  VFPLRGKLLNVRDASVDQISKNAEIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ--- 640

Query: 534  APLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITP 593
                                     DHDGSHIKGLLIN++   +P+LLKIP FL+EFITP
Sbjct: 641  -------------------------DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITP 675

Query: 594  IVKATNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
            IVK    + K      SF+++P+YE WKE+   +   W  KYYKGLGTS++++ + YFQ+
Sbjct: 676  IVKVWKGDPKNPTHSKSFFTIPEYEEWKEAHAHD-KKWQKKYYKGLGTSSTEDAQIYFQD 734

Query: 650  ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKE 709
            +  H K F    D++ E IELAFSKKK + RK+WL QF+PG +LD     I Y+DF+NKE
Sbjct: 735  LDRHLKQFHTLQDKEAELIELAFSKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINKE 794

Query: 710  LILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQ 769
            LILFSMAD  RSIPS+VDGLKPGQRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ 
Sbjct: 795  LILFSMADNIRSIPSVVDGLKPGQRKVLYTMFKRNVRKDIKVVELAGYVSGMTAYQHGDN 854

Query: 770  SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
            SL +TI+G+AQ FVGSNNIN L+P+G FG+R QGG D+ASARYI+TRLSP  R LF   D
Sbjct: 855  SLHTTIVGLAQTFVGSNNINCLEPSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHPAD 914

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
            + LL    +DG+ IEP  Y+P++P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ G
Sbjct: 915  EPLLVNNVDDGKVIEPETYVPVVPLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMVG 974

Query: 890  EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREF 949
            E + PM PW+RGF G  E T S   G  Y  +GII++  +  + I ELPIR WTQD+++ 
Sbjct: 975  EELVPMKPWFRGFKG--EVTGS---GDRYKFSGIIKQTADNEVEITELPIRTWTQDFKDK 1029

Query: 950  LESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
            LE II  ++  SFI+ ++ Y+  T V F + + E+ M +  +EGL +KFKL   I+TSNM
Sbjct: 1030 LEEIIKAEKVPSFIKDYKDYNTHTNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNM 1089

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVN 1067
              FD++G I +Y+TPE IL  F+ +R++ YEKRK+  L  L+ +L KL N+ RF+  +++
Sbjct: 1090 VAFDAEGRITRYETPEDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIID 1149

Query: 1068 GEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID 1127
            G++V++ +K+  L+ EL++KGF PFPK   + E   AG  +E E+ EE       V S  
Sbjct: 1150 GKLVISKKKKAVLIQELQEKGFKPFPKVVGTPEPGEAGDVEEEEDEEEE-TTTAAVSSDA 1208

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD-ELDK 1186
            YDYLLSM + +LT E+V  L         EVD L K T E LW KDLD    +   +L+ 
Sbjct: 1209 YDYLLSMPLWSLTQERVDKLRRQIGDKEMEVDALIKLTKEDLWRKDLDEFISEWRFQLED 1268

Query: 1187 SDARAEEERMKIKGNGNG-----DAGPKIVAKRAPKNARKND--------KKSNNARATE 1233
             D R    R KI   G         G +  A +  K    +D        KK+   R   
Sbjct: 1269 EDNR----RKKIASRGRRLSSKVKTGSRATAAKKRKAGSGDDSDFDVPKGKKATVNRVQP 1324

Query: 1234 AMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPD 1293
              G +D ++K  KPK +A  +   A+  DD E++ +P  K R      + A  K  P+P 
Sbjct: 1325 KGGLLDFLSK-AKPKPKATSRVDGADDSDDFEDEVMPKPKSRGT---AKEAKAKPAPAPV 1380

Query: 1294 QSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIAAPEEGKKG 1353
              G+ + + + + +   +  KR          E S  E   ++DDD   E+      ++ 
Sbjct: 1381 SKGLSDADFLDIDSMGTDNPKR----------EPSPVEKPKVVDDDSDIEMIPKPTTQRS 1430

Query: 1354 GR------KAAGNSKAAKPAAETKK-----RGPAKKQQPEASLGQRLLTEMLKPAESS 1400
             R      K  G S +     +        +G  KK+    S G  L +E  +PA  S
Sbjct: 1431 ARNKQQPKKYHGFSTSEDEEDDDFDVSAMVKGIDKKKPNTVSTGPTLFSEPSRPAGGS 1488


>gi|149054149|gb|EDM05966.1| topoisomerase (DNA) 2 alpha [Rattus norvegicus]
          Length = 1528

 Score = 1187 bits (3071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1200 (51%), Positives = 820/1200 (68%), Gaps = 71/1200 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 28   SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 86

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 87   ILVNAADNKQRDPKMSCIRVTIDAENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 146

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  +  + 
Sbjct: 147  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGDMEL- 205

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+R+PVK
Sbjct: 206  KPFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNRLPVK 264

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        ++   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 265  GFRSYVDMYLKDKVDETGNALKVVHEQVNPRWEVCLTMSEKGFQQISFVNSIATSKGGRH 324

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+ + ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 325  VDYVADQIVSKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 384

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 385  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQIQLNKKCSAVKHNRIKGIPKLDDA 443

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG RNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 444  NDAGSRNSAECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 503

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 504  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 541

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 542  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEIAFYSLPE 593

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF N+  H+  F +   +D  AI LAF
Sbjct: 594  FEEWK-SANPNHKKWKVKYYKGLGTSTSKEAKEYFANMKRHRIQFKYSGPEDDAAISLAF 652

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+++ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 653  SKKQVDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTMYLTYNDFINKELILFSNSDNER 712

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 713  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 772

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L +L +D 
Sbjct: 773  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPSKDDHTLRFLYDDN 832

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRLL+GE   PM P Y+
Sbjct: 833  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLLDGEEPLPMLPSYK 892

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             + GTIE+ AS +    Y + G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 893  NYKGTIEELASNQ----YVINGEVAILNSTTIEITELPIRTWTQTYKEQVLEPMLNGTEK 948

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F + ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 949  TPPLITDYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1008

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+IV+ N+ 
Sbjct: 1009 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKP 1068

Query: 1077 RTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEVVNGVQSI--DYDYLLS 1133
            + +L+  L Q+G+   P K  K  +  V    +  E  E   E  +        ++YLL 
Sbjct: 1069 KKELIKVLIQRGYDSDPVKAWKEAQQKVPEEEENEENEESESESSSPAAESGPTFNYLLD 1128

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEE 1193
            M +  LT EK   L   RD+  +E++ L+K TP  LW +DL A   +L+ ++  + + E+
Sbjct: 1129 MPLWYLTKEKKDELCKQRDEKEQELNTLKKKTPSDLWKEDLAAFVEELEVVEAKEKQDEQ 1188


>gi|18369820|dbj|BAB84105.1| DNA topoisomerase II [Talaromyces marneffei]
          Length = 1162

 Score = 1186 bits (3068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1182 (51%), Positives = 815/1182 (68%), Gaps = 63/1182 (5%)

Query: 16   NVVGPTAPNKT-IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTIS 74
            ++V   AP +T   + YQK +Q EHI+ RPDTYIGSIEK TQ +W+Y+  +++M  R ++
Sbjct: 6    DLVASEAPTQTGAGDKYQKLTQYEHIIKRPDTYIGSIEKTTQQMWVYDSATESMAFREVT 65

Query: 75   YVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVY 134
            +VPGLYKIFDEI+VNAADNKQ D KMD +++ ID+E  +ISV N+G G+P+EIH +E +Y
Sbjct: 66   FVPGLYKIFDEIVVNAADNKQNDEKMDEIRITIDRESGVISVWNNGRGIPIEIHSKEKIY 125

Query: 135  VPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTN 194
            VPELIFGHLLTSSNYDD   K TGGRNG+GAKL N+FSTEF IET D ++ KKY Q +T+
Sbjct: 126  VPELIFGHLLTSSNYDDGQMKVTGGRNGFGAKLCNVFSTEFSIETCDSRQGKKYHQTWTD 185

Query: 195  NMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVK 254
            NM K  +  I+  K  D++TKV+FKPD  KF M  ++DD  AL+K+RV DLAG     V 
Sbjct: 186  NMSKVGKAKITSSK-SDDYTKVTFKPDYQKFGMDGMDDDFEALVKRRVYDLAGT--AKVA 242

Query: 255  VELNGHRVPVKSFAEYVDMYPKSVT--RFHERVNE-----------RWEICVTLSEGQFQ 301
            V+LNG R+PV++F +Y++MY K++   R  E VN+           RWE+   +S+G FQ
Sbjct: 243  VKLNGSRIPVRNFKKYMEMYTKAIKKERGEEAVNDKSEIVTASPDPRWEVGFAVSDGSFQ 302

Query: 302  QVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALID 360
            QVSFVN IAT  GG+HV+Y+A+Q+ N +   V KKNK  A +KA  ++NH+++FVNALI 
Sbjct: 303  QVSFVNSIATTSGGSHVNYIADQICNRLAEAVKKKNKQGATLKASQIRNHIFIFVNALIV 362

Query: 361  NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG 420
            NPAF SQTKE LT + S FGSKC L ++F KKV  K+ ++  +L +A  K  + LKK DG
Sbjct: 363  NPAFTSQTKEQLTTKPSQFGSKCILDDDFYKKV-LKTEVMTNILHFAEKKADQLLKKTDG 421

Query: 421  TKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGK 480
             +   +    KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGK
Sbjct: 422  GRRSRMNN-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGK 480

Query: 481  LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLL 540
            LLNVR+AS +Q+  N+EI NIK  +GL+   EY + + LRYGHLMIMTDQ          
Sbjct: 481  LLNVRDASVDQISKNAEIQNIKSFIGLQHKKEYTDTRGLRYGHLMIMTDQ---------- 530

Query: 541  WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK 600
                              DHDGSHIKGLLINF+   +PSLLKIP FL+EFITPI+K    
Sbjct: 531  ------------------DHDGSHIKGLLINFLQVQFPSLLKIPEFLIEFITPIIKVWKG 572

Query: 601  N----GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKD 656
            +     K  SF++MP+YE WKE    N  SW  KYYKGLGTST+++ + YF+++  H K+
Sbjct: 573  DPKNPTKSKSFFTMPEYEQWKEE-NKNDLSWQHKYYKGLGTSTTEDAQIYFRDLDRHLKE 631

Query: 657  FVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMA 716
            F    D + + I+LAFSKKK + RK+WL Q++PG  LD   K I Y+DF+NKELILFSMA
Sbjct: 632  FHTMQDHEAQLIDLAFSKKKADERKEWLRQYKPGTFLDHSTKQITYTDFINKELILFSMA 691

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D QRSIPS+VDGLKPGQRK+L+  FKRN  K+ KV + +G+VS  +AY HGE SL  TI+
Sbjct: 692  DNQRSIPSVVDGLKPGQRKVLYTCFKRNLKKDMKVVELAGHVSGMTAYQHGETSLQQTIV 751

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
            G+AQ FVGSNN+N L+P+G FG+R QGG D ASARYI+TRLSP  R +F + D+ LL Y 
Sbjct: 752  GLAQTFVGSNNLNCLEPSGNFGSRLQGGADCASARYIYTRLSPFARRVFNQQDEPLLTYN 811

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +DG++IEP  Y+P++P +L+NG++GIGTGWSS IPNYNP DIVAN++R+++GE  EPM 
Sbjct: 812  EDDGEKIEPELYVPVVPLILINGADGIGTGWSSSIPNYNPEDIVANLKRMMDGEEPEPMQ 871

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII-- 954
            PW+RGF G +    + +    Y  +G I E+N+  + I ELPIR WTQD+++ LE II  
Sbjct: 872  PWFRGFNGEV----TPQGPDRYKFSGRIHELNDKEVEITELPIRTWTQDFKDKLEDIIKA 927

Query: 955  DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
            ++  SFI+ ++ Y+  T V F + + E+ +    +EGL +KFKL+ TI+T+N+  FD +G
Sbjct: 928  EKTPSFIKDYKDYNTHTKVHFVIQMDEKHLKAAVEEGLEEKFKLSRTIATTNLVAFDPEG 987

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             I KY T   IL+EFF +RL++YE+RK+ QL  L+ +L K  N+ RFI  +++G++VV+ 
Sbjct: 988  RITKYATVSDILKEFFAVRLKYYERRKQHQLSELQKQLDKFTNQARFIQMIIDGKLVVSK 1047

Query: 1075 RKRTDLLLELRQKGFTPFPKNSKSIEAVVAG-ATDETEESEENPEVVNGVQSIDYDYLLS 1133
            +K+  L+ EL++KGF PFPK +   EAV AG      EE E + E    + S  YDYLL 
Sbjct: 1048 KKKATLITELKEKGFKPFPKVA---EAVKAGETEQVVEEEESSEEANTEMASNAYDYLLG 1104

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            MAI +LT E+V+ LL        E+D+L K + E +W +DLD
Sbjct: 1105 MAIWSLTQERVEKLLRQIGDKEVEIDELIKLSKEEIWRRDLD 1146


>gi|326473740|gb|EGD97749.1| DNA topoisomerase II [Trichophyton tonsurans CBS 112818]
          Length = 1678

 Score = 1186 bits (3068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 644/1345 (47%), Positives = 864/1345 (64%), Gaps = 89/1345 (6%)

Query: 9    LTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTM 68
            L    N +    T       E YQK +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M
Sbjct: 108  LANVENGSFTAETVEGGGSSEKYQKITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELM 167

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIH 128
             +R +S+VPGLYKIFDEILVNAADNKQ DP M  ++V +D+E   ISV N+G G+PVEIH
Sbjct: 168  EYREVSFVPGLYKIFDEILVNAADNKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIH 227

Query: 129  QEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKY 188
            ++E +Y+PELIFGHLLTSSNY+D  +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+
Sbjct: 228  KKEQIYIPELIFGHLLTSSNYNDMQEKVTGGRNGYGAKLCNIFSNEFTVETADSKQKKKF 287

Query: 189  KQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGC 248
            K  +TNNM    +  I++CK GD++TKV+FKPD AKF M  ++DD  AL+K+RV D+AG 
Sbjct: 288  KLTWTNNMSTMGKAKITECK-GDDYTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGT 346

Query: 249  LGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR---------------FHERVNERWEICV 293
             G SVK  LNG R+P+KSF +Y++MY K++                   E  + RWEI  
Sbjct: 347  CGTSVK--LNGTRIPIKSFKKYMEMYTKAIKAERGEDSTSASDKNDIITESPDRRWEIGF 404

Query: 294  TLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLW 352
            T+S+G FQQVSFVN IAT  GGTHV+Y+++Q+ N +   + KKNK  A +KA  +KNH++
Sbjct: 405  TVSDGSFQQVSFVNSIATTSGGTHVNYISDQICNKLADALKKKNKAGATLKAAQIKNHIF 464

Query: 353  VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS 412
            +FVN+ I NPAF SQTKE LT R S FGSKC +S++FLKKV  K+ +++ +L +A  K  
Sbjct: 465  LFVNSQIVNPAFTSQTKEQLTTRASQFGSKCVVSDDFLKKVM-KTRVMDDILHFAEKKAD 523

Query: 413  KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF 472
            + LKK DG +   +    KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D F
Sbjct: 524  QILKKTDGNRRSRMNN-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLF 582

Query: 473  GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVL 532
            GVFPLRGKLLNVR+AS +Q+  N+EI NIK  +GL+   EY + + LRYGHLMIMTDQ  
Sbjct: 583  GVFPLRGKLLNVRDASVDQISKNAEIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ-- 640

Query: 533  LAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 592
                                      DHDGSHIKGLLIN++   +P+LLKIP FL+EFIT
Sbjct: 641  --------------------------DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFIT 674

Query: 593  PIVKATNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQ 648
            PIVK    N K      SF+++P+YE WKE+   +   W  KYYKGLGTS++++ + YFQ
Sbjct: 675  PIVKVWKGNPKNPTHTKSFFTLPEYEEWKEAHAHD-KKWQKKYYKGLGTSSTEDAQIYFQ 733

Query: 649  NITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNK 708
            ++  H K F    D++ E IELAFSKKK + RK+WL QF+PG +LD     I Y+DF+NK
Sbjct: 734  DLDRHLKQFHTLQDKEAELIELAFSKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINK 793

Query: 709  ELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGE 768
            ELILFSMAD  RSIPS+VDGLKPGQRK+L+  FKRN  K+ KV + +GYVS  +AY HG+
Sbjct: 794  ELILFSMADNIRSIPSVVDGLKPGQRKVLYTMFKRNVRKDVKVVELAGYVSGMTAYQHGD 853

Query: 769  QSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKD 828
             SL +TI+G+AQ FVGSNNIN L+P+G FG+R QGG D+ASARYI+TRLSP  R LF + 
Sbjct: 854  NSLHTTIVGLAQTFVGSNNINCLEPSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQA 913

Query: 829  DDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN 888
            D+ LL    +DG+ IEP  Y+P++P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ 
Sbjct: 914  DEPLLVNNIDDGKVIEPETYVPVVPLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMA 973

Query: 889  GEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE 948
            GE + PM PW+RGF G  E T S   G  Y  +GII++  +  + I ELPI  WTQD+++
Sbjct: 974  GEELVPMKPWFRGFKG--EVTGS---GDRYKFSGIIKQTADNEVEITELPICTWTQDFKD 1028

Query: 949  FLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN 1006
             LE II  ++  SFI+ ++ Y+  T V F + + E+ M +  +EGL +KFKL   I+TSN
Sbjct: 1029 KLEEIIKAEKVPSFIKDYKDYNTHTDVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSN 1088

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            M  FD++G I +Y+TPE IL  F+ +R++ YEKRK+  L  L+ +L KL N+ RF+  ++
Sbjct: 1089 MVAFDAEGRITRYETPEDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMII 1148

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI 1126
            +G++V++ +K+  L+ EL++KGF PFPK   + E   AG  D  EE +E  E      S 
Sbjct: 1149 DGKLVISKKKKAVLIQELQEKGFKPFPKVVGTPEPGEAG--DVEEEEDEEEETTTAAASS 1206

Query: 1127 D-YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQL 1181
            D YDYLLSM + +LT E+V  L         EVD L K + E LW KDLD        QL
Sbjct: 1207 DAYDYLLSMPLWSLTQERVDKLRRQIGDKEMEVDALIKLSKEDLWRKDLDEFISEWRFQL 1266

Query: 1182 DELDKSDARAEEERMKIKGNGNG-----DAGPKIVAKRAPKNARKND--------KKSNN 1228
            ++        E  R KI   G         G +  A +  K    +D        KK+  
Sbjct: 1267 ED-------EENRRKKIASRGRRLSAKVKTGSRATAAKKRKAGSGDDSDFDVPKVKKAAV 1319

Query: 1229 ARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKL 1288
             R     G +D ++K  KPK +A  +   A+  DD E++ +P  K R A    +     +
Sbjct: 1320 NRVQPKGGLLDFLSK-AKPKPKATSRVDGADDSDDFEDEVMPKPKSRGAAKEAKAKPAPV 1378

Query: 1289 EPSPDQSGVMETEKVQVPAKKKEPS 1313
                  +  M+ + +     K+EPS
Sbjct: 1379 PKRLSDADFMDIDSMGTDNPKREPS 1403


>gi|2909391|emb|CAA76312.1| DNA topoisomerase II alpha [Cricetulus longicaudatus]
          Length = 1526

 Score = 1186 bits (3067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 682/1474 (46%), Positives = 913/1474 (61%), Gaps = 129/1474 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 28   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 86

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 87   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 146

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST F +ETA  +  K +KQ + +NMG+  +  + 
Sbjct: 147  SSNYDDDEKKVTGGRNGYGAKLCNIFSTRFTVETASKEYKKMFKQTWMDNMGRAGDMEL- 205

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 206  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 264

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        ++   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 265  GFRSYVDMYLKDKLDETGNALKVVHEQVNPRWEVCLTMSEKGFQQISFVNSIATSKGGRH 324

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+ + ++ VV KKNK    VKAH VKNH+W+FVNALI+NP+FDSQTKE +TL+ 
Sbjct: 325  VDYVADQIVSKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPSFDSQTKENMTLQA 384

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 385  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQIQLNKKCSAVKHNRIKGIPKLDDA 443

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG RNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 444  NDAGSRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 503

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 504  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 541

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + L+FYS+P+
Sbjct: 542  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQELAFYSLPE 593

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 594  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 652

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+++ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 653  SKKQVDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 712

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V E S+YHHGE SL  TI+ +AQ
Sbjct: 713  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVGEMSSYHHGEMSLMMTIINLAQ 772

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+TR LFP  DD  L +L +D 
Sbjct: 773  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLTRLLFPPKDDHTLKFLYDDN 832

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS   PN++ R++V N+RRLL+GE   PM P Y+
Sbjct: 833  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKTPNFDIREVVNNIRRLLDGEEPLPMLPSYK 892

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ AS +    Y + G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 893  NFKGTIEELASNQ----YVINGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 948

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F + ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 949  TPPLITDYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1008

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL++FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1009 KKYDTVLDILKDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1068

Query: 1077 RTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMA 1135
            + +L+  L Q+G+   P K  K  +  V    +  E   EN + V       ++YLL M 
Sbjct: 1069 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNENSDSV-AESGPTFNYLLDMP 1127

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEER 1195
            +  LT EK   L   R++  +E++ L+  +P  LW +DL     +L+ ++  + + E+  
Sbjct: 1128 LWYLTKEKKDELCKQRNEKEQELNTLKNKSPSDLWKEDLAVFIEELEVVEAKEKQDEQVG 1187

Query: 1196 MKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKK 1255
            +  KG        ++       + ++   +       EA           + K R  +K 
Sbjct: 1188 LPGKGGKAKGKKAQMSEVLPSPHGKRVIPQVTMEMKAEA-----------EKKIRKKIKS 1236

Query: 1256 APAEKLDDDEEDEVPDLKQRLAKLN--EQLASTKLE---------------PSPDQSGVM 1298
               E    +   E+  LKQR+ K    E  A TK +               P  D    M
Sbjct: 1237 ENVEGTPTENGLELGSLKQRIEKKQKKEPGAMTKKQTTLAFKPIKKGKKRNPWSDSESDM 1296

Query: 1299 ETEK--VQVPAKKKEPSKRTAAQKKVVTVETSDSED---EIIIDDDEAF--------EIA 1345
             + +  V VP ++K+P  R AA K   T++    ED       D+DE F        +  
Sbjct: 1297 SSNESNVDVPPREKDP--RRAATKAKFTMDLDSDEDFSGSDGKDEDEDFFPLDTTPPKTK 1354

Query: 1346 APEEGKKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKP--------- 1396
             P++  K   K   ++ +  P ++ K   PA    P A L     TE LKP         
Sbjct: 1355 IPQKNTKKALKPQKSAMSGDPESDEKDSVPASPGPPAADLPAD--TEQLKPSSKQTVAVK 1412

Query: 1397 -----AESSPEKKVRKMRASPFNKKSGSMLGRAG 1425
                 ++SS      K RA P   KS S L   G
Sbjct: 1413 KTATKSQSSTSTAGTKKRAVPKGSKSDSALNAHG 1446


>gi|303322098|ref|XP_003071042.1| DNA topoisomerase II, putative [Coccidioides posadasii C735 delta
            SOWgp]
 gi|240110741|gb|EER28897.1| DNA topoisomerase II, putative [Coccidioides posadasii C735 delta
            SOWgp]
          Length = 1717

 Score = 1186 bits (3067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 654/1394 (46%), Positives = 887/1394 (63%), Gaps = 124/1394 (8%)

Query: 8    PLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT 67
            PL+T  N +V    +  K+ ++ YQK SQ+EHI+ RPDTYIGSIE+  Q +W+Y   +  
Sbjct: 115  PLSTVQNESVTNEASSGKSSDQ-YQKLSQVEHIIKRPDTYIGSIERTQQNMWVYNSTTDQ 173

Query: 68   MIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEI 127
            M +R +SYVPGLYKIFDEILVNAADNKQRD  M  +KV +D E   ISV N+G G+PVEI
Sbjct: 174  MEYREVSYVPGLYKIFDEILVNAADNKQRDNNMSEIKVTLDMEAGEISVWNNGRGIPVEI 233

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
            H +E +Y+PELIFGHLLTSSNYDD+  K TGGRNGYGAKL NIFSTEF +ETAD +  KK
Sbjct: 234  HSKEKIYIPELIFGHLLTSSNYDDDQAKVTGGRNGYGAKLCNIFSTEFTVETADSRSKKK 293

Query: 188  YKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
            Y+Q + +NM K  +  I++ K G+++TK++FKPD  KF M  ++ D  AL+K+RV DLAG
Sbjct: 294  YRQTWQDNMSKMGKAKITESK-GNDYTKITFKPDFKKFGMEGMDADFEALVKRRVYDLAG 352

Query: 248  CLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE---------------RWEIC 292
                 V V LNG R+P+ +F +Y++MY K++ R  ER  E               RWEI 
Sbjct: 353  TC--RVTVRLNGSRIPISNFKKYMEMYTKAIKR--ERGEEAASDKSEIVTDSTEPRWEIG 408

Query: 293  VTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANV-KAHNVKNHL 351
              +S+G FQQVSFVN IAT  GGTHV+Y+++Q+ + +   V KKNK   + K   ++NH+
Sbjct: 409  FAVSDGSFQQVSFVNSIATTSGGTHVNYISDQICSKLADAVKKKNKTGPLLKPAQIRNHI 468

Query: 352  WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQ 411
            ++FVN LI NPAF SQTKE LT +QS FGSKC LSEEFLKK+  K+ +++ ++ +A  K 
Sbjct: 469  FLFVNCLIVNPAFTSQTKEQLTTKQSQFGSKCVLSEEFLKKIL-KTQVMQNIMHFAEQKA 527

Query: 412  SKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDR 471
             + LKK DG++   +    KL DAN AG +    CTLILTEGDSAK LAMAG +VVG D 
Sbjct: 528  DQILKKTDGSRRARMNN-PKLTDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDL 586

Query: 472  FGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQV 531
            FGVFPLRGKLLNVR+AS +Q+  N EI NIK  LGL+   EY + + LRYGHLMIMTDQ 
Sbjct: 587  FGVFPLRGKLLNVRDASVDQISKNQEIQNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ- 645

Query: 532  LLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI 591
                                       DHDGSHIKGLLIN++   +PSLLKIP FL+EFI
Sbjct: 646  ---------------------------DHDGSHIKGLLINYLQVAFPSLLKIPGFLIEFI 678

Query: 592  TPIVKATNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYF 647
            TPIVK    + K      SF+++P+YE WK+S G +   W  KYYKGLGTS++++ + YF
Sbjct: 679  TPIVKVWKGDPKNPTASKSFFTLPEYEEWKKSHGHD-RRWDKKYYKGLGTSSTEDAEVYF 737

Query: 648  QNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVN 707
            +++  H K+F    D + + I+LAFSKKK + RK+WL QF+PG +LD     I Y+DF+N
Sbjct: 738  RDLDRHLKEFHAMQDTEAQLIDLAFSKKKADDRKEWLRQFKPGTYLDHSVDKITYTDFIN 797

Query: 708  KELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHG 767
            KELILFSMAD  RSIPS+VDGLKPGQRK+L+  FKRN  K+ KV +  GYVS  +AY HG
Sbjct: 798  KELILFSMADNIRSIPSVVDGLKPGQRKVLYAMFKRNVKKDMKVVELGGYVSGMTAYQHG 857

Query: 768  EQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPK 827
            E SL  TI+G+AQ FVGSNN+N L+P+G FG+R QGG D ASARYI TRLSP  R +F  
Sbjct: 858  EASLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRLQGGSDCASARYIHTRLSPFARRIFHA 917

Query: 828  DDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL 887
             D+ LL    +DG+ IEP  Y+P++P +L+NG++GIGTGWS+ IPN+NP D+VAN+RRL+
Sbjct: 918  ADEPLLKSNIDDGKVIEPEVYVPVVPMILINGADGIGTGWSTSIPNFNPEDVVANLRRLM 977

Query: 888  NGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYR 947
            +GE + PM PW+RGF G  E TAS   G  Y  +GII++  +  + I ELPIR WTQD++
Sbjct: 978  DGESLVPMKPWFRGFTG--EVTAS---GDRYKFSGIIKQTGDCEVEITELPIRTWTQDFK 1032

Query: 948  EFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTS 1005
            + LE II  ++  SFI+ ++ Y+  + V F + + E+ M +  ++GL ++FKL+ TI+T+
Sbjct: 1033 DKLEEIIKAEKAPSFIKDYKDYNTHSKVHFIIQMDEKHMKKALEDGLEERFKLSKTIATT 1092

Query: 1006 NMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGV 1065
            NM  FD++G I KYDT E IL+ F+ +R+ FYEKRK+  L  L  EL K  N+ RF+  +
Sbjct: 1093 NMVAFDAEGRITKYDTAEDILKAFYAVRIRFYEKRKQHLLAQLHKELDKFTNQARFVQMI 1152

Query: 1066 VNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS 1125
            ++G++V++ +++  L+ EL++KGF P P   K+++A   G  +   E EE+ E    + S
Sbjct: 1153 IDGKLVISKKRKPKLIEELKEKGFKPIP---KAVDAAKEGENEPAVEEEESEEDEQ-LSS 1208

Query: 1126 IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL-DEL 1184
              +DYLL M + +LT E+V+ LL        E+D L K + E LW +DLD    +  ++L
Sbjct: 1209 DVFDYLLGMPLWSLTQERVEKLLRQIGDKELEIDALIKLSKEDLWKRDLDEFITEWRNQL 1268

Query: 1185 DKSDARAEEER-------MKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNA-RATEAMG 1236
            +  + RA++ R        K+K  G G A  K       + A  +D  S+ A +A +A  
Sbjct: 1269 EDEERRAKKARSYGRRTSTKLKTAGRGPASKK-------RKALGDDDDSDFAPKAKKA-- 1319

Query: 1237 EMDNVTKVVKPKG--------RAGLKKAPAEKLDDDEEDE------VPDLKQRLAKLNEQ 1282
                V   VKPKG         A   K  A +LD   E E      +P  K R A   + 
Sbjct: 1320 ---TVVNKVKPKGGLLDYLSKPAAKSKTKATRLDSTSETEDFEAEVIPQKKSRAASSKKP 1376

Query: 1283 LASTKL---EPSPDQSGVM--ET-EKVQVPAK---------------KKEPSKRTAAQKK 1321
             A+T     +   D+  ++  ET EK + PA+               K +P+K+  A  K
Sbjct: 1377 EAATTFAFSDSEDDKDDILSKETDEKAREPARPPSPDIPAISDSDDYKPKPAKKATAVSK 1436

Query: 1322 VVTVETSDSEDEII 1335
                E  DS+ EI+
Sbjct: 1437 KAPKEDDDSDIEIV 1450


>gi|440908155|gb|ELR58207.1| DNA topoisomerase 2-beta, partial [Bos grunniens mutus]
          Length = 1597

 Score = 1185 bits (3066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1199 (51%), Positives = 817/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 27   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 85

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 86   ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 145

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 146  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 204

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 205  KHFDGEDYTCITFQPDLSKFKMEKLDRDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 263

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 264  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 323

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 324  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 383

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 384  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 442

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 443  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 502

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 503  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 540

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 541  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 592

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 593  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 651

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 652  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 711

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 712  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 771

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 772  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDDN 831

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 832  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 891

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 892  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 947

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 948  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1007

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1008 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1067

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +E++   ++    +G  S  D++Y+L+M+
Sbjct: 1068 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEESQNQHDDSSSDSGTPSGPDFNYILNMS 1127

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV DL++ +P  LW +DL A    ++ELD  +A+  E+
Sbjct: 1128 LWSLTKEKVEELIKQRDAKGREVSDLKRKSPSDLWKEDLAAF---VEELDVVEAQERED 1183


>gi|410896057|ref|XP_003961516.1| PREDICTED: DNA topoisomerase 2-alpha-like [Takifugu rubripes]
          Length = 1562

 Score = 1185 bits (3066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 687/1491 (46%), Positives = 921/1491 (61%), Gaps = 163/1491 (10%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPD+YIGS+E  TQ +W+Y+E+   +  R +++VPGLYKIFDE
Sbjct: 25   SVERIYQKKTQLEHILLRPDSYIGSVEPVTQQMWVYDEDV-GLNCRDVTFVPGLYKIFDE 83

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E++ I+V N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 84   ILVNAADNKQRDKSMSCIKVSIDVENNTIAVWNNGKGIPVVEHKVEKVYVPALIFGQLLT 143

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ET+     K +KQ + +NMG+  + NI 
Sbjct: 144  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETSCKDSKKTFKQTWYDNMGRAGDANI- 202

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            +  +G+ +T ++F+PDLAKF M+ L+ D +ALM +R  D+AG   K V+V  NG R+PV 
Sbjct: 203  RSFDGEEYTCITFRPDLAKFKMSILDKDTLALMTRRAYDVAGAT-KGVRVFFNGKRLPVT 261

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE VNERWE+C+T+SE  FQQVSFVN IAT KGG H
Sbjct: 262  GFRSYVDLYLKDKVDEIGNALNVVHEVVNERWEVCLTMSEKGFQQVSFVNSIATTKGGRH 321

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+QV + ++ VV KKNK    VK   VKNH+W+FVN L++NP FDSQTKE +TL+Q
Sbjct: 322  VDYVADQVVSKLIEVVKKKNKAGVAVKPFQVKNHIWLFVNCLVENPTFDSQTKENMTLQQ 381

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C LS++F+K+ TA  GIVE++++W  FK    L KK    K   ++G+ KL+DA
Sbjct: 382  KSFGSTCPLSDKFIKQATA-CGIVESIMNWVKFKAQTQLNKKCSAVKHTKIKGVPKLDDA 440

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG+NS  CTLILTEGDSAK LA++GL VVGRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 441  NDAGGKNSIGCTLILTEGDSAKTLAVSGLGVVGRDRYGVFPLRGKMLNVREASLKQIMEN 500

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KILGL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 501  AEINNIIKILGLQYKKNYSDPESLKTLRYGKIMIMTDQ---------------------- 538

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+  +F+ EFITPI+KA++K  + LSFYS+P+
Sbjct: 539  ------DQDGSHIKGLLINFIHHNWPSLLR-HNFIEEFITPIIKASHKKSQ-LSFYSIPE 590

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            + AWKES   N  SW IKYYKGLGTSTS+E KEYF ++  H+  F +   +D EAI LAF
Sbjct: 591  FNAWKES-QANHKSWKIKYYKGLGTSTSQEAKEYFSDMQRHRIPFKYAGPEDDEAITLAF 649

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKK+E RK+WL  F            P ++L  Q  KY+ Y+DFVNKEL+LFS +D +R
Sbjct: 650  SKKKVEERKEWLTNFMTNRRQRREHNLPEDYLYGQTTKYLSYNDFVNKELVLFSNSDNER 709

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIP +VDG KPGQRK+LFC FKRN  +E KVAQ +G V+E SAYHHGE SL  TI+G+AQ
Sbjct: 710  SIPCLVDGFKPGQRKVLFCCFKRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQ 769

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+N+LQP GQFGTR  GGKD+AS RYIFT LS +TR +FP  DD LL Y  +D 
Sbjct: 770  NFVGSNNLNMLQPLGQFGTRLHGGKDSASPRYIFTMLSTLTRLVFPPVDDNLLKYNYDDN 829

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VLVNG+EGIGTGW+S IPNY+ R+IV N+ R+LNG+   PM P Y+
Sbjct: 830  QRVEPEWYIPIIPMVLVNGAEGIGTGWASKIPNYDVREIVNNIHRMLNGDEPLPMLPSYK 889

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQNDS 959
            GF GTIE   + +    Y  +G +  ++ TT+ I ELP++ WTQ Y+E  LE +++  + 
Sbjct: 890  GFKGTIEHVMNNQ----YMNSGEVAIIDSTTIEISELPVKSWTQTYKENVLEPMLNGTEK 945

Query: 960  ---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  F++Y  DTTV F V +SEE +   +  G  K FKL   ++ ++M LFD  G +
Sbjct: 946  VPPLITDFKEYHTDTTVRFVVKMSEEKLREAEAAGFHKVFKLQNPLTCNSMVLFDHAGSL 1005

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY++ + IL++FF +R+++Y  RK   +  L  E  KL N+ RFIL  + G +V+ N+ 
Sbjct: 1006 KKYESVQDILKDFFELRMKYYVLRKDWLVGMLGAESAKLTNQARFILEKIQGTLVIENKP 1065

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAI 1136
            + +L+  L+Q G+   P  +  +        +E EE E   E  +G    DY+YLLSM +
Sbjct: 1066 KKELIRMLQQMGYDSDPVKAWKLAQEKEETVEEQEEDEAKEEEASGP---DYNYLLSMPM 1122

Query: 1137 GTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE-R 1195
              LT EK + L   RD    E++ L+K +P  LW +DL A     +EL+ S+A+ +E   
Sbjct: 1123 WFLTKEKKEELCKQRDAKLTELNTLKKRSPIDLWKEDLAAFS---EELENSEAKEKENAA 1179

Query: 1196 MKI-KGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGR---- 1250
            M + KG G G                K  K     R T              P+GR    
Sbjct: 1180 MPVKKGAGKG----------------KTLKMKQETRPT--------------PQGRRVIP 1209

Query: 1251 --AGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAK 1308
                  KA A +  D ++ E     +R  K+ + +     E   D  GVM +E V + A+
Sbjct: 1210 RVTSTMKAEANRKADTKKGEA----KRGKKIKDVVMQMDFE---DAEGVMSSEDVGLAAR 1262

Query: 1309 KKEPSKRTAAQKKVVTVETSD---------------SEDEIIIDD---DEAFEIAAPEEG 1350
              + +K  A +K V + + S                S+DE    D   ++  E+AAP E 
Sbjct: 1263 LSKKTKTQAKEKAVKSSKQSTIQFKPVAKKPKKNPWSDDETPQSDSDMEDEEEVAAPRE- 1321

Query: 1351 KKGGRKAAGNSKAAKPAAETK-----KRGPAKKQQPEASLGQRLLTEMLKPAES----SP 1401
             + GR+A    K +   +E +     K  P  K++   S     + +   PA S     P
Sbjct: 1322 -QVGRRAKDTVKYSLSDSEEEWNFHGKNAP--KRKAVISDDDSFIPDADSPAPSPKVPEP 1378

Query: 1402 EKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSPSTSEEVAEVLPPKARPQ 1452
             KKV K +++    +S S             SSPS  +  A   P K +P+
Sbjct: 1379 VKKVAKSKSTSKPTESKS-------------SSPSDDQVTASKAPVKPKPK 1416


>gi|426348387|ref|XP_004041818.1| PREDICTED: DNA topoisomerase 2-alpha [Gorilla gorilla gorilla]
          Length = 1531

 Score = 1185 bits (3066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1204 (51%), Positives = 824/1204 (68%), Gaps = 79/1204 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFRYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R+IV N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELP+R WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPVRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  +      +D  +E+E++  V +   +  ++Y
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTDSGPT--FNY 1127

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R++  +E+D L++ +P  LW +DL      ++EL+  +A+
Sbjct: 1128 LLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATF---IEELEAVEAK 1184

Query: 1191 AEEE 1194
             +++
Sbjct: 1185 EKQD 1188


>gi|358366486|dbj|GAA83107.1| DNA topoisomerase II [Aspergillus kawachii IFO 4308]
          Length = 1695

 Score = 1185 bits (3066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1213 (50%), Positives = 819/1213 (67%), Gaps = 75/1213 (6%)

Query: 35   SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
            +QLEHI+ RPDTYIGS+E+ TQ +W+Y  ES+ M +R +SYVPGLYKIFDEI+VNAADNK
Sbjct: 125  TQLEHIIKRPDTYIGSVERTTQQMWVYSSESEGMEYREVSYVPGLYKIFDEIVVNAADNK 184

Query: 95   QRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVK 154
            Q D  M  ++V +D+E  +ISV N+G G+P+E+H +E +YVPELIFGHLLTSSNYDD  +
Sbjct: 185  QNDENMSEIRVTVDRESGVISVWNNGRGIPIEMHAKEKIYVPELIFGHLLTSSNYDDTQQ 244

Query: 155  KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWT 214
            K TGGRNG+GAKL N+FSTEF IET D  + KKYKQ +T+NM K  +  I++ K G+++T
Sbjct: 245  KVTGGRNGFGAKLCNVFSTEFSIETQDSSQKKKYKQTWTDNMTKIGKAKITEAK-GEDYT 303

Query: 215  KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY 274
            KV+FKPD AKF+M  ++DD  AL+K+RV DLAG     V V+LNG R+P++ F +Y++MY
Sbjct: 304  KVTFKPDYAKFSMDGMDDDFEALVKRRVYDLAGTA--KVNVKLNGTRIPIRGFKKYMEMY 361

Query: 275  PKSVTRFHER---------------VNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
             K++ +  ER                + RWE+   +S+G FQQVSFVN IAT  GGTHV+
Sbjct: 362  TKAIRK--ERGDTGPAPKDEIITCSPDPRWEVGFAVSDGAFQQVSFVNSIATTSGGTHVN 419

Query: 320  YVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            Y+A+Q+ N +   V KKNKN A +K   ++NH+++FVNALI NPAF SQTKE LT + S 
Sbjct: 420  YIADQICNRLAEQVKKKNKNGATLKTAQIRNHIFIFVNALIVNPAFTSQTKEQLTTKASQ 479

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLA 438
            FGSKC L E+F KK+  K+ ++E +L +A  K  + LKK DG +   +    KL DAN A
Sbjct: 480  FGSKCVLDEDFYKKIL-KTAVMENILHFAQQKADQMLKKTDGGRRSRMNN-PKLTDANKA 537

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            G ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N EI
Sbjct: 538  GTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASFDQISKNQEI 597

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
             NIK  LGL+   EY + + LRYGHLMIMTDQ                            
Sbjct: 598  QNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ---------------------------- 629

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFYSMPDYE 614
            DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPIVK    +     K  SF++MP+YE
Sbjct: 630  DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIVKVWKGDPKNPTKQRSFFTMPEYE 689

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
            AW E    +   W  KYYKGLGTST+++ + YF+++  H K+F    D + E IELAFSK
Sbjct: 690  AWAEE-HKHERGWDHKYYKGLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEAELIELAFSK 748

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            KK + RK+WL QF+PG  LD   + I Y+DF+NKELILFSMAD  RSIPS+VDGLKPGQR
Sbjct: 749  KKADERKEWLRQFKPGTFLDHSVEKISYTDFINKELILFSMADNVRSIPSVVDGLKPGQR 808

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+L+  F+RN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ FVGSNNIN L+P+
Sbjct: 809  KVLYTCFRRNLKKDMKVVELAGHVSGMTAYQHGDVSLQQTIVGLAQTFVGSNNINCLEPS 868

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            G FG+R QGG D ASARYI+TRLSP  R +F   D+ LL Y  +DG+ IEP  YMP++P 
Sbjct: 869  GNFGSRLQGGSDCASARYIYTRLSPFARRVFHASDEPLLTYNVDDGKTIEPEIYMPVVPM 928

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            +L+NG++GIGTGWSS IPNYNP D+V N++RL++GE ++PM PW+RGF G +        
Sbjct: 929  ILINGADGIGTGWSSSIPNYNPEDVVDNLKRLMDGEEIKPMQPWFRGFTGEVTAI----G 984

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTT 972
            G  +  +GII+E  E  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  T 
Sbjct: 985  GDRFKFSGIIKETGEKEVEITELPIRTWTQDFKDKLEDIIKAEKTPSFIKDYKDYNTHTK 1044

Query: 973  VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
            V F + + E+ +    +EGL  KFKLT TI+T+N+  FD +G I KY T + IL+EFF +
Sbjct: 1045 VHFVIQMDEKHLKSAVEEGLEDKFKLTKTIATTNLVAFDPEGRITKYATVDDILKEFFAV 1104

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            RL+FYE+RK+ QL  ++ EL KL N+ RF+  +++GE+VV+ +K++ L++EL++KGF PF
Sbjct: 1105 RLKFYERRKQYQLNEMQKELEKLSNQARFVQMIIDGELVVSKKKKSVLVVELKEKGFKPF 1164

Query: 1093 PKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRD 1152
            PK + + +A  A    E EE  E+ +  N + +  YDYLL MAI +LT E+V+ L     
Sbjct: 1165 PKVADAAKAGEAEPAAEDEEDSEDIDDTNNLSNA-YDYLLGMAIWSLTQERVERLRRQIG 1223

Query: 1153 KLNEEVDDLRKATPESLWVKDLDAL----DMQLDELDKSDARAEEERMKIKGNGNGDAGP 1208
                E+D L K + E +W +DL+        QLD+        E  RM+   N       
Sbjct: 1224 DKEMEIDTLIKLSKEDIWKRDLEEFINEWRFQLDD--------EARRMRKVANMGRRTSS 1275

Query: 1209 KIVAKRAPKNARK 1221
            K++       ARK
Sbjct: 1276 KLMTAVGRGGARK 1288


>gi|320032749|gb|EFW14700.1| DNA topoisomerase 2 [Coccidioides posadasii str. Silveira]
          Length = 1717

 Score = 1185 bits (3065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 648/1397 (46%), Positives = 880/1397 (62%), Gaps = 130/1397 (9%)

Query: 8    PLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT 67
            PL+T  N +V    +  K+ ++ YQK SQ+EHI+ RPDTYIGSIE+  Q +W+Y   +  
Sbjct: 115  PLSTVQNESVTNEASSGKSSDQ-YQKLSQVEHIIKRPDTYIGSIERTQQNMWVYNSTTDQ 173

Query: 68   MIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEI 127
            M +R +SYVPGLYKIFDEILVNAADNKQRD  M  +KV +D E   ISV N+G G+PVEI
Sbjct: 174  MEYREVSYVPGLYKIFDEILVNAADNKQRDNNMSEIKVTLDMEAGEISVWNNGRGIPVEI 233

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
            H +E +Y+PELIFGHLLTSSNYDD+  K TGGRNGYGAKL NIFSTEF +ETAD +  KK
Sbjct: 234  HSKEKIYIPELIFGHLLTSSNYDDDQAKVTGGRNGYGAKLCNIFSTEFTVETADSRSKKK 293

Query: 188  YKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
            Y+Q + +NM K  +  I++ K G+++TK++FKPD  KF M  ++ D  AL+K+RV DLAG
Sbjct: 294  YRQTWQDNMSKMGKAKITESK-GNDYTKITFKPDFKKFGMEGMDADFEALVKRRVYDLAG 352

Query: 248  CLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR-------------FHERVNERWEICVT 294
                 V V LNG R+P+ +F +Y++MY K++ R               +    RWEI   
Sbjct: 353  TC--RVTVRLNGSRIPISNFKKYMEMYTKAIKRERGEEAASDKSEIVTDSTEPRWEIGFA 410

Query: 295  LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANV-KAHNVKNHLWV 353
            +S+G FQQVSFVN IAT  GGTHV+Y+++Q+ + +   V KKNK   + K   ++NH+++
Sbjct: 411  VSDGSFQQVSFVNSIATTSGGTHVNYISDQICSKLADAVKKKNKTGPLLKPAQIRNHIFL 470

Query: 354  FVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSK 413
            FVN LI NPAF SQTKE LT +QS FGSKC LSEEFLKK+  K+ +++ ++ +A  K  +
Sbjct: 471  FVNCLIVNPAFTSQTKEQLTTKQSQFGSKCVLSEEFLKKIL-KTQVMQNIMHFAEQKADQ 529

Query: 414  DLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFG 473
             LKK DG++   +    KL DAN AG +    CTLILTEGDSAK LAMAG +VVG D FG
Sbjct: 530  ILKKTDGSRRARMNN-PKLTDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFG 588

Query: 474  VFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLL 533
            VFPLRGKLLNVR+AS +Q+  N EI NIK  LGL+   EY + + LRYGHLMIMTDQ   
Sbjct: 589  VFPLRGKLLNVRDASVDQISKNQEIQNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ--- 645

Query: 534  APLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITP 593
                                     DHDGSHIKGLLIN++   +PSLLKIP FL+EFITP
Sbjct: 646  -------------------------DHDGSHIKGLLINYLQVAFPSLLKIPGFLIEFITP 680

Query: 594  IVKATNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
            IVK    + K      SF+++P+YE WK+S G +   W  KYYKGLGTS++++ + YF++
Sbjct: 681  IVKVWKGDPKNPTASKSFFTLPEYEEWKKSHGHD-RRWDKKYYKGLGTSSTEDAEVYFRD 739

Query: 650  ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKE 709
            +  H K+F    D + + I+LAFSKKK + RK+WL QF+PG +LD     I Y+DF+NKE
Sbjct: 740  LDRHLKEFHAMQDTEAQLIDLAFSKKKADDRKEWLRQFKPGTYLDHSVDKITYTDFINKE 799

Query: 710  LILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQ 769
            LILFSMAD  RSIPS+VDGLKPGQRK+L+  FKRN  K+ KV +  GYVS  +AY HGE 
Sbjct: 800  LILFSMADNIRSIPSVVDGLKPGQRKVLYAMFKRNVKKDMKVVELGGYVSGMTAYQHGEA 859

Query: 770  SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
            SL  TI+G+AQ FVGSNN+N L+P+G FG+R QGG D ASARYI TRLSP  R +F   D
Sbjct: 860  SLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRLQGGSDCASARYIHTRLSPFARRIFHAAD 919

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
            + LL    +DG+ IEP  Y+P++P +L+NG++GIGTGWS+ IPN+NP D+VAN+RRL++G
Sbjct: 920  EPLLKSNIDDGKVIEPEVYVPVVPMILINGADGIGTGWSTSIPNFNPEDVVANLRRLMDG 979

Query: 890  EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREF 949
            E + PM PW+RGF G  E TAS   G  Y  +GII++  +  + I ELPIR WTQD+++ 
Sbjct: 980  ESLVPMKPWFRGFTG--EVTAS---GDRYKFSGIIKQTGDCEVEITELPIRTWTQDFKDK 1034

Query: 950  LESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
            LE II  ++  SFI+ ++ Y+  + V F + + E+ M +  ++GL ++FKL+ TI+T+NM
Sbjct: 1035 LEEIIKAEKAPSFIKDYKDYNTHSKVHFIIQMDEKHMKKALEDGLEERFKLSKTIATTNM 1094

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVN 1067
              FD++G I KYDT E IL+ F+ +R+ FYEKRK+  L  L  EL K  N+ RF+  +++
Sbjct: 1095 VAFDAEGRITKYDTAEDILKAFYAVRIRFYEKRKQHLLAQLHKELDKFTNQARFVQMIID 1154

Query: 1068 GEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID 1127
            G++V++ +++  L+ EL++KGF P P   K+++A   G  +   E EE+ E    + S  
Sbjct: 1155 GKLVISKKRKPKLIEELKEKGFKPIP---KAVDAAKEGENEPAVEEEESEEDEQ-LSSDV 1210

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL-DELDK 1186
            +DYLL M + +LT E+V+ LL        E+D L K + E LW +DLD    +  ++L+ 
Sbjct: 1211 FDYLLGMPLWSLTQERVEKLLRQIGDKELEIDALIKLSKEDLWKRDLDEFITEWRNQLED 1270

Query: 1187 SDARAEEER-------MKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNA-RATEAMGEM 1238
             + RA++ R        K+K  G G A  K       + A  +D  S+ A +A +A    
Sbjct: 1271 EERRAKKARSYGRRTSTKLKTAGRGPASKK-------RKALGDDDDSDFAPKAKKA---- 1319

Query: 1239 DNVTKVVKPKG--------RAGLKKAPAEKLDDDEEDE------VPDLKQRLAKLNEQLA 1284
              V   VKPKG         A   K  A +LD   E E      +P  K R A   +  A
Sbjct: 1320 -TVVNKVKPKGGLLDYLSKPAAKSKTKATRLDSTSETEDFEAEVIPQKKSRAASSKKPEA 1378

Query: 1285 STKLE--------------------------PSPDQSGVMETEKVQVPAKKKEPSKRTAA 1318
            +T                             PSPD   + +++       K +P+K+  A
Sbjct: 1379 ATTFAFSDSEDDKDDILSKETDERAREPARPPSPDIPAISDSDDY-----KPKPAKKATA 1433

Query: 1319 QKKVVTVETSDSEDEII 1335
              K    E  DS+ EI+
Sbjct: 1434 VSKKAPKEDDDSDIEIV 1450


>gi|2909393|emb|CAA76313.1| DNA topoisomerase II alpha [Cricetulus longicaudatus]
          Length = 1526

 Score = 1185 bits (3065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 682/1474 (46%), Positives = 913/1474 (61%), Gaps = 129/1474 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 28   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 86

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 87   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 146

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST F +ETA  +  K +KQ + +NMG+  +  + 
Sbjct: 147  SSNYDDDEKKVTGGRNGYGAKLCNIFSTRFTVETASKEYKKMFKQTWMDNMGRAGDMEL- 205

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 206  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 264

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        ++   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 265  GFRSYVDMYLKDKLDETGNALKVVHEQVNPRWEVCLTMSEKGFQQISFVNSIATSKGGRH 324

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+ + ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 325  VDYVADQIVSKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 384

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 385  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQIQLNKKCSAVKHNRIKGIPKLDDA 443

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG RNS +CTLILTEGDSAK LA++GL VVGRD++GVFPL GK+LNVREAS  Q++ N
Sbjct: 444  NDAGSRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLGGKILNVREASHKQIMEN 503

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 504  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 541

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + L+FYS+P+
Sbjct: 542  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQELAFYSLPE 593

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 594  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 652

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+++ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 653  SKKQVDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 712

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 713  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 772

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+TR LFP  DD  L +L +D 
Sbjct: 773  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLTRLLFPPKDDHTLKFLYDDN 832

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRLL+GE   PM P Y+
Sbjct: 833  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDIREVVNNIRRLLDGEEPLPMLPSYK 892

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ AS +    Y + G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 893  NFKGTIEELASNQ----YVINGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 948

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F + ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 949  TPPLITDYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1008

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL++FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1009 KKYDTVLDILKDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1068

Query: 1077 RTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMA 1135
            + +L+  L Q+G+   P K  K  +  V    +  E   EN + V       ++YLL M 
Sbjct: 1069 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNENSDSV-AESGPTFNYLLDMP 1127

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEER 1195
            +  LT EK   L   R++  +E++ L+  +P  LW +DL     +L+ ++  + + E+  
Sbjct: 1128 LWYLTKEKKDELCKQRNEKEQELNTLKNKSPSDLWKEDLAVFIEELEVVEAKEKQDEQVG 1187

Query: 1196 MKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKK 1255
            +  KG        ++       + ++   +       EA           + K R  +K 
Sbjct: 1188 LPGKGGKAKGKKAQMSEVLPSPHGKRVIPQVTMEMKAEA-----------EKKIRKKIKS 1236

Query: 1256 APAEKLDDDEEDEVPDLKQRLAKLN--EQLASTKLE---------------PSPDQSGVM 1298
               E    +   E+  LKQR+ K    E  A TK +               P  D    M
Sbjct: 1237 ENVEGTPTENGLELGSLKQRIEKKQKKEPGAMTKKQTTLAFKPIKKGKKRNPWSDSESDM 1296

Query: 1299 ETEK--VQVPAKKKEPSKRTAAQKKVVTVETSDSED---EIIIDDDEAF--------EIA 1345
             + +  V VP ++K+P  R AA K   T++    ED       D+DE F        +  
Sbjct: 1297 SSNESNVDVPPREKDP--RRAATKAKFTMDLDSDEDFSGSDGKDEDEDFFPLDTTPPKTK 1354

Query: 1346 APEEGKKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKP--------- 1396
             P++  K   K   ++ +  P ++ K   PA    P A L     TE LKP         
Sbjct: 1355 IPQKNTKKALKPQKSAMSGDPESDEKDSVPASPGPPAADLPAD--TEQLKPSSKQTVAVK 1412

Query: 1397 -----AESSPEKKVRKMRASPFNKKSGSMLGRAG 1425
                 ++SS      K RA P   KS S L   G
Sbjct: 1413 KTATKSQSSTSTAGTKKRAVPKGSKSDSALNAHG 1446


>gi|296472299|tpg|DAA14414.1| TPA: topoisomerase (DNA) II beta 180kDa [Bos taurus]
          Length = 1707

 Score = 1185 bits (3065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1199 (51%), Positives = 817/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 137  SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 195

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 196  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 255

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 256  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 314

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 315  KHFDGEDYTCITFQPDLSKFKMEKLDRDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 373

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 374  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 433

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 434  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 493

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 494  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 552

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 553  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 612

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 613  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 650

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 651  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 702

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 703  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 761

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 762  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 821

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 822  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 881

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 882  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDDN 941

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 942  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 1001

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 1002 NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 1057

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 1058 TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1117

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1118 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1177

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +E++   ++    +G  S  D++Y+L+M+
Sbjct: 1178 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEESQNQHDDSSSDSGTPSGPDFNYILNMS 1237

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV DL++ +P  LW +DL A    ++ELD  +A+  E+
Sbjct: 1238 LWSLTKEKVEELIKQRDAKGREVSDLKRKSPSDLWKEDLAAF---VEELDVVEAQERED 1293


>gi|397522864|ref|XP_003831468.1| PREDICTED: DNA topoisomerase 2-alpha [Pan paniscus]
          Length = 1531

 Score = 1185 bits (3065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1203 (51%), Positives = 822/1203 (68%), Gaps = 76/1203 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R+IV N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELP+R WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPVRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  +      +D  +E+E++  V +   +  ++Y
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTDSGPT--FNY 1127

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R++  +E+D L++ +P  LW +DL     +L+ ++  + +
Sbjct: 1128 LLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATFIEELEAVEAKEKQ 1187

Query: 1191 AEE 1193
             E+
Sbjct: 1188 DEQ 1190


>gi|153945749|ref|NP_035753.2| DNA topoisomerase 2-alpha [Mus musculus]
 gi|363548478|sp|Q01320.2|TOP2A_MOUSE RecName: Full=DNA topoisomerase 2-alpha; AltName: Full=DNA
            topoisomerase II, alpha isozyme
 gi|148684229|gb|EDL16176.1| topoisomerase (DNA) II alpha [Mus musculus]
          Length = 1528

 Score = 1184 bits (3064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 681/1534 (44%), Positives = 935/1534 (60%), Gaps = 140/1534 (9%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 28   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 86

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E+++IS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 87   ILVNAADNKQRDPKMSCIRVTIDPENNVISIWNNGKGIPVVEHKVEKIYVPALIFGQLLT 146

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  +  + 
Sbjct: 147  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGDMEL- 205

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+ +PVK
Sbjct: 206  KPFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNSLPVK 264

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 265  GFRSYVDLYLKDKVDETGNSLKVIHEQVNPRWEVCLTMSERGFQQISFVNSIATSKGGRH 324

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+ + ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 325  VDYVADQIVSKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 384

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 385  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQIQLNKKCSAVKHTKIKGIPKLDDA 443

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG RNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 444  NDAGSRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 503

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 504  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 541

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 542  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEIAFYSLPE 593

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 594  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 652

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+++ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 653  SKKQVDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQSTSYLTYNDFINKELILFSNSDNER 712

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 713  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 772

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L +L +D 
Sbjct: 773  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPKDDHTLRFLYDDN 832

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRLL+GE   PM P Y+
Sbjct: 833  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLLDGEEPLPMLPSYK 892

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ AS +    Y + G +  ++ TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 893  NFKGTIEELASNQ----YVINGEVAILDSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 948

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              S I  +R+Y  DTTV F + ++EE +   ++ GL K FKL ++++ ++M LFD  G +
Sbjct: 949  TPSLITDYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQSSLTCNSMVLFDHVGCL 1008

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+IV+ N+ 
Sbjct: 1009 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKP 1068

Query: 1077 RTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
            + +L+  L Q+G+   P K  K  +  V    +  E   E     +  ++   ++YLL M
Sbjct: 1069 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDTETSTSDSAAEAGPTFNYLLDM 1128

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEE- 1193
             +  LT EK   L   R++  +E++ L++ +P  LW +DL     +L+ ++  + + E+ 
Sbjct: 1129 PLWYLTKEKKDELCKQRNEKEQELNTLKQKSPSDLWKEDLAVFIEELEVVEAKEKQDEQV 1188

Query: 1194 -------ERMKIKGNGNGDAGPKIVAKR------------APKNARKNDKKSNNARATEA 1234
                   +    K     D  P    KR            A K  RK   KS N   T A
Sbjct: 1189 GLPGKAGKAKGKKAQMCADVLPSPRGKRVIPQVTVEMKAEAEKKIRKK-IKSENVEGTPA 1247

Query: 1235 --------------------MGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEE------DE 1268
                                 G     T   KP  + G KK P    + D        D 
Sbjct: 1248 EDGAEPGSLRQRIEKKQKKEPGAKKQTTLPFKPV-KKGRKKNPWSDSESDVSSNESNVDV 1306

Query: 1269 VPDLKQRLAKLNEQLASTKLEPSPDQSGVMETE-------------KVQVPAKKKEPSKR 1315
             P  K++ +   +   +  L+   D SG+ E +             K ++P K  + + +
Sbjct: 1307 PPRQKEQRSAAAKAKFTVDLDSDEDFSGLDEKDEDEDFLPLDATPPKAKIPPKNTKKALK 1366

Query: 1316 TAAQKKVVTVETSDSEDEI-------IIDDDEAFEIAAPEEGKKGGRKAAGNSKAAKPAA 1368
            T      V    SD +D +         D     E + P +   G +K A  S+++   A
Sbjct: 1367 TQGSSMSVVDLESDVKDSVPASPGVPAADFPAETEQSKPSKKTVGVKKTATKSQSSVSTA 1426

Query: 1369 ETKKRGPAKKQQPEASLGQRLLTEMLKPAESSPEKKVRKMRASPFNKKSGSMLGRAGTIE 1428
             TKKR   K  + +++L  R ++E   PA++   +K +   +   +      + +  T +
Sbjct: 1427 GTKKRAAPKGTKSDSALSAR-VSEKPAPAKAKNSRKRKPSSSDSSDSDFERAISKGATSK 1485

Query: 1429 EPSGSSPSTSEEVAEVLPPKARPQRANRRQARYV 1462
            +  G       ++ + + P+A+  RA R+  +Y+
Sbjct: 1486 KAKGEEQDFPVDLEDTIAPRAKSDRA-RKPIKYL 1518


>gi|73966009|ref|XP_537646.2| PREDICTED: DNA topoisomerase 2-alpha isoform 1 [Canis lupus
            familiaris]
          Length = 1532

 Score = 1184 bits (3064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1201 (51%), Positives = 824/1201 (68%), Gaps = 72/1201 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M +R +++VPGLYKIFDE
Sbjct: 29   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDI-GMNYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMELR 207

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
                G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 208  PF-NGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKVDETGNPLKIIHEQVNPRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDY+A+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYIADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQV 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K  T   GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAATG-CGIVESILNWVKFKAQIQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGGRNSNECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYDDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF N+  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFANMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD+ L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPKDDQTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDIREVVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELP+R WTQ Y+E  LE ++   ++
Sbjct: 894  NFRGTIEELAPNQ----YVISGEVAILNSTTIEISELPVRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFPKNS--KSIEAVVAGATDETEESEENPEVVNGVQ--SIDYDYLL 1132
            + +L+  L Q+G+   P  +  ++ + V     +E  ++E   E  + V+     ++YLL
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNENEAEKSDSVRDSGPTFNYLL 1129

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1192
             M +  LT EK   L   R++  +E++ L++ +P  LW +DL     +L+ ++  + + E
Sbjct: 1130 DMPLWYLTKEKKDELCKLRNEKEQELETLKRKSPTDLWKEDLATFVEELEAVETKEKQEE 1189

Query: 1193 E 1193
            +
Sbjct: 1190 Q 1190


>gi|410214808|gb|JAA04623.1| topoisomerase (DNA) II alpha 170kDa [Pan troglodytes]
 gi|410253008|gb|JAA14471.1| topoisomerase (DNA) II alpha 170kDa [Pan troglodytes]
 gi|410293406|gb|JAA25303.1| topoisomerase (DNA) II alpha 170kDa [Pan troglodytes]
          Length = 1531

 Score = 1184 bits (3064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1204 (51%), Positives = 824/1204 (68%), Gaps = 79/1204 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R+IV N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  +      +D  +E+E++  V +   +  ++Y
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTDSGPT--FNY 1127

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R++  +E+D L++ +P  LW +DL      ++EL+  +A+
Sbjct: 1128 LLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATF---IEELEAVEAK 1184

Query: 1191 AEEE 1194
             +++
Sbjct: 1185 EKQD 1188


>gi|291045133|ref|NP_001094328.1| topoisomerase II beta [Rattus norvegicus]
 gi|109945583|dbj|BAE96971.1| DNA topoisomerase IIbeta [Rattus norvegicus]
          Length = 1614

 Score = 1184 bits (3064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1199 (51%), Positives = 816/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 38   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 96

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 97   ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 156

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 157  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 215

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDLAKF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 216  KHFDGEDYTCITFQPDLAKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 274

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 275  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 334

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 335  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 394

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 395  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 453

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LN REAS  Q++ N
Sbjct: 454  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNAREASHKQIMEN 513

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 514  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 551

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 552  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 603

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ W++ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 604  FDEWEKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 662

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 663  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 722

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 723  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 782

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 783  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 842

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L G    PM P Y+
Sbjct: 843  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLEGLDPHPMLPNYK 902

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 903  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 958

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 959  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1018

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1019 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1078

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   ++ +   ++    +G  S  D++Y+L+M+
Sbjct: 1079 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDAQNPHDDSSSDSGTPSGPDFNYILNMS 1138

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1139 LWSLTKEKVEELIKQRDTKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1194


>gi|328550504|ref|NP_001127186.1| DNA topoisomerase 2-beta [Pongo abelii]
 gi|55725810|emb|CAH89685.1| hypothetical protein [Pongo abelii]
          Length = 1620

 Score = 1184 bits (3064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1200 (52%), Positives = 819/1200 (68%), Gaps = 75/1200 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 45   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 103

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 104  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 163

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 164  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 222

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG C G  VKV  NG ++PV
Sbjct: 223  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCRG--VKVMFNGKKLPV 280

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
              F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG 
Sbjct: 281  NGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGR 340

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+
Sbjct: 341  HVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQ 400

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 401  PKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDD 459

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ 
Sbjct: 460  ANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIME 519

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+G +    Y++   +K+LRYG +MIMTDQ                     
Sbjct: 520  NAEINNIIKIVGQQYKKSYDDAESLKTLRYGKIMIMTDQ--------------------- 558

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P
Sbjct: 559  -------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIP 609

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LA
Sbjct: 610  EFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLA 668

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +
Sbjct: 669  FSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNE 728

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 729  RSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 788

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D
Sbjct: 789  QNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLAR-LFPAVDDNLLKFLYDD 847

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y
Sbjct: 848  NQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNY 907

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 908  KNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTD 963

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G 
Sbjct: 964  KTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGC 1023

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR
Sbjct: 1024 LKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENR 1083

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
             + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M
Sbjct: 1084 SKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNM 1143

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            ++ +LT EKV+ L+  RD    +V+DL++ +P  LW +DL A    ++ELDK +++  E+
Sbjct: 1144 SLWSLTKEKVEELIKQRDAKGRDVNDLKRKSPSDLWKEDLAAF---VEELDKVESQERED 1200


>gi|319411861|emb|CBQ73904.1| probable DNA topoisomerase II [Sporisorium reilianum SRZ2]
          Length = 1513

 Score = 1184 bits (3063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1207 (51%), Positives = 817/1207 (67%), Gaps = 79/1207 (6%)

Query: 20   PTAP-----NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTIS 74
            P AP     +K+  E YQK SQLEHIL RPDTYIGS+EKHT+ LW+Y++  K M +R  +
Sbjct: 87   PPAPAKSGTSKSASETYQKLSQLEHILKRPDTYIGSVEKHTEKLWVYDKTKKQMAYRETT 146

Query: 75   YVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVY 134
            YVPG YKIFDEILVNAADNK RD  M+ +KV I+++   I V N+G G+PVE+H +E VY
Sbjct: 147  YVPGFYKIFDEILVNAADNKARDLNMNHLKVEINRDEGSIMVWNNGHGIPVEMHDKERVY 206

Query: 135  VPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTN 194
            +PELIFGHLLTSSNYDDN  K TGGRNGYGAKL NI+STEF +ETAD K   KYKQ F+ 
Sbjct: 207  IPELIFGHLLTSSNYDDNEAKVTGGRNGYGAKLANIYSTEFTVETADSKNQCKYKQTFSK 266

Query: 195  NMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVK 254
            NM  K +P I+K  + + +T ++FKPDLA F M  ++D + ALM KRV D+AG + K +K
Sbjct: 267  NMHDKGKPKITKHSKSEEYTCITFKPDLALFGMESIDDHMEALMLKRVYDMAGTV-KGIK 325

Query: 255  VELNGHRVPVKSFAEYVDMY--------------------------PKSVTRFHERVNE- 287
            V LNG  + VK+F +YV+MY                          PK    +   V++ 
Sbjct: 326  VTLNGEALKVKNFKQYVEMYVTAINELGGKTDNTEEGAADVPTGAAPKPAIIYESTVDKG 385

Query: 288  -RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHN 346
              WE+   +S+G+F+QVSFVN IATIKGG HVD+VA+QV + ++  V K  K   V  + 
Sbjct: 386  RNWEVAFAVSDGEFRQVSFVNNIATIKGGKHVDHVADQVISRLIDHVKKDKKTGKVMPNQ 445

Query: 347  VKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSW 406
            V+  LWVFVN  I NP FD QTKETLTL+QS+FGSK  L++EF +KV  KSG+V+ ++S+
Sbjct: 446  VRQQLWVFVNCQIVNPTFDGQTKETLTLKQSAFGSKWTLTDEFARKVI-KSGVVDNIVSF 504

Query: 407  ANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSV 466
            A FKQ + LKK DG K   +  I KLEDAN AGGR ++ CTLILTEGDSAK+LA+AG+  
Sbjct: 505  ARFKQDQALKKTDGHKRTRITNIPKLEDANNAGGRKAKDCTLILTEGDSAKSLAVAGIVE 564

Query: 467  VGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMI 526
            VGRD +GVFPLRGKLLNVREAS +Q++ N+EI  IK+ILGL+ G +Y +V SLRYG +MI
Sbjct: 565  VGRDNYGVFPLRGKLLNVREASHDQIMKNAEIKAIKEILGLQHGKQYLDVNSLRYGSIMI 624

Query: 527  MTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSF 586
            MTDQ                            DHDGSHIKGL+INF+  F+PSLL+IP F
Sbjct: 625  MTDQ----------------------------DHDGSHIKGLIINFLDHFYPSLLRIPGF 656

Query: 587  LVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEY 646
            LVEFITPIVK   K  + LSF+++P+YE W++S  G    W IKYYKGLGTS  ++ K+Y
Sbjct: 657  LVEFITPIVKC-RKGKQELSFFTIPEYETWRDSHNG-GKGWHIKYYKGLGTSDPQDAKKY 714

Query: 647  FQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFV 706
            F+ +  HK  F    + D E I+LAF+KKK + RK+WL QF PG +LD     I Y+DF+
Sbjct: 715  FRALEKHKLPFDVTQEGDRELIDLAFNKKKADDRKEWLRQFRPGTYLDHNTDRIPYADFI 774

Query: 707  NKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHH 766
            NKELILFSMAD  RSIPS+VDGLKPGQRK+ +  F R    E KV    G+V   +AYHH
Sbjct: 775  NKELILFSMADNLRSIPSVVDGLKPGQRKVFYVMFDRKSNAELKVNTLVGHVMGQAAYHH 834

Query: 767  GEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFP 826
            G+ +L  TI+G+AQ+FVGSNN+NLL+P GQFGTR  GGKDAAS RYIFT L  ITR LFP
Sbjct: 835  GDAALVMTIVGLAQNFVGSNNVNLLEPRGQFGTRLLGGKDAASGRYIFTALPKITRALFP 894

Query: 827  KDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRL 886
            + DD LLDYL++DGQ++EP WY+P++P VL+NG+EGIGTGWS+ +PNYNP +IVAN+RR 
Sbjct: 895  QADDALLDYLDDDGQKVEPHWYIPVVPQVLMNGAEGIGTGWSTSVPNYNPHEIVANLRRR 954

Query: 887  LNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDY 946
              GE + PM PW+RGF G +E+ +       + V+G + +++E T  I ELPIR WT +Y
Sbjct: 955  TAGEDIIPMKPWFRGFTGDVEEFSPGR----FKVSGRVTQIDEKTWEITELPIRTWTSNY 1010

Query: 947  REFLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTIS 1003
            +E LE  I   ++  + I+ +++Y  ++TV+F V L+ +      ++G    FKL+  IS
Sbjct: 1011 KESLEERIVSSEKAQATIKDYKEYHTESTVNFIVELTAKGQAEIAEKGADAFFKLSCQIS 1070

Query: 1004 TSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFIL 1063
            T+NM LFD  G IKKY +PE+ILEEF+ +RL +Y+KRK+  ++ L+L   KL N+ RF+ 
Sbjct: 1071 TTNMVLFDQDGKIKKYSSPEEILEEFYLLRLSYYQKRKEHLVDQLKLMYDKLSNQARFVQ 1130

Query: 1064 GVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGV 1123
             ++N ++VV+NRKR D++ +LR+  F PFPK  K+  A      +  +E + + +     
Sbjct: 1131 MIINRQLVVSNRKRADIVADLRKNDFRPFPKQGKASIAAEPEDDEPIDEEDISADS---- 1186

Query: 1124 QSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
               D+DYLL+MAI  LT EKV+ LL +RD   EE+  L   +P++LW +DL       +E
Sbjct: 1187 ---DFDYLLNMAIYNLTKEKVEKLLKERDVKEEELKVLIGRSPQNLWDEDLGKFIELWEE 1243

Query: 1184 LDKSDAR 1190
            +   D R
Sbjct: 1244 VLAEDER 1250


>gi|292830|gb|AAA61209.1| DNA topoisomerase II (EC 5.99.1.3) [Homo sapiens]
          Length = 1531

 Score = 1184 bits (3063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1204 (51%), Positives = 824/1204 (68%), Gaps = 79/1204 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R+IV N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELP+R WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPVRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  +      +D  +E+E++  V +   +  ++Y
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTDSGPT--FNY 1127

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R++  +E+D L++ +P  LW +DL      ++EL+  +A+
Sbjct: 1128 LLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATF---IEELEAVEAK 1184

Query: 1191 AEEE 1194
             +++
Sbjct: 1185 EKQD 1188


>gi|19913406|ref|NP_001058.2| DNA topoisomerase 2-alpha [Homo sapiens]
 gi|13959709|sp|P11388.3|TOP2A_HUMAN RecName: Full=DNA topoisomerase 2-alpha; AltName: Full=DNA
            topoisomerase II, alpha isozyme
 gi|3869316|gb|AAC77388.1| topoisomerase II alpha [Homo sapiens]
 gi|119581067|gb|EAW60663.1| topoisomerase (DNA) II alpha 170kDa, isoform CRA_c [Homo sapiens]
 gi|187954517|gb|AAI40792.1| TOP2A protein [Homo sapiens]
 gi|306921645|dbj|BAJ17902.1| topoisomerase (DNA) II alpha 170kDa [synthetic construct]
          Length = 1531

 Score = 1184 bits (3063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1204 (51%), Positives = 824/1204 (68%), Gaps = 79/1204 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R+IV N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELP+R WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPVRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  +      +D  +E+E++  V +   +  ++Y
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTDSGPT--FNY 1127

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R++  +E+D L++ +P  LW +DL      ++EL+  +A+
Sbjct: 1128 LLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATF---IEELEAVEAK 1184

Query: 1191 AEEE 1194
             +++
Sbjct: 1185 EKQD 1188


>gi|45382161|ref|NP_990122.1| DNA topoisomerase 2-alpha [Gallus gallus]
 gi|13959708|sp|O42130.2|TOP2A_CHICK RecName: Full=DNA topoisomerase 2-alpha; AltName: Full=DNA
            topoisomerase II, alpha isozyme
 gi|6714553|dbj|BAA22539.2| DNA topoisomeraseII_alpha [Gallus gallus]
          Length = 1553

 Score = 1184 bits (3063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 685/1493 (45%), Positives = 930/1493 (62%), Gaps = 121/1493 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++E+   +  R +++VPGLYKIFDE
Sbjct: 30   SVERIYQKKTQLEHILLRPDTYIGSVETVTQQMWVFDEDV-GLNCRDVTFVPGLYKIFDE 88

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E++ ISV N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 89   ILVNAADNKQRDKSMSCIKVTIDPENNTISVWNNGKGIPVVEHKVEKVYVPALIFGQLLT 148

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ +T+NMGK  E  + 
Sbjct: 149  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACREYKKLFKQTWTDNMGKAGEMTL- 207

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T V+F+PDL+KF MT L+ D+VALM +R  D+AG   K VKV LNG R+PVK
Sbjct: 208  KHFDGEDYTCVTFQPDLSKFKMTILDKDIVALMSRRAYDIAGST-KDVKVFLNGKRLPVK 266

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE VN RWE+C+TLSE  FQQVSFVN IAT KGG H
Sbjct: 267  GFRSYVDLYLKDKVDETGNALKVIHEEVNSRWEVCLTLSEKGFQQVSFVNSIATTKGGRH 326

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNKN   VK   VKNH+W+FVN+LI+NP FDSQTKE +TL+ 
Sbjct: 327  VDYVADQIVTKLIDVVKKKNKNGVGVKPFQVKNHMWIFVNSLIENPTFDSQTKENMTLQA 386

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++G+ KL+DA
Sbjct: 387  KSFGSTCKLSEKFIKGAVG-CGIVESILNWVKFKAQTQLNKKCSAVKHTKIKGVPKLDDA 445

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG +NS  CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 446  NDAGSKNSIDCTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKMLNVREASHKQIMEN 505

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y +   +KSLRYG +MIMTDQ                      
Sbjct: 506  AEINNIIKIVGLQYKKNYEDRESLKSLRYGKIMIMTDQ---------------------- 543

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+  +FL EFITPI+K + KN + + FYS+P+
Sbjct: 544  ------DQDGSHIKGLLINFIHHNWPSLLR-HNFLEEFITPIIKVS-KNKEEIPFYSIPE 595

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N +SW IKYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 596  FEEWKSSTQ-NYNSWKIKYYKGLGTSTSKEAKEYFADMARHRIGFKYSGPEDDAAITLAF 654

Query: 673  SKKKIEARKKWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKELILFSMADLQR 720
            SKKK+E RK+WL  F            P ++L  K+  Y+ Y+DF+NKEL+LFS +D +R
Sbjct: 655  SKKKVEERKEWLTNFMEDRRQRNVHGLPEDYLYGKDTNYLTYNDFINKELVLFSNSDNER 714

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDGLKPGQRK+LF  FKRN  +E K AQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 715  SIPSLVDGLKPGQRKVLFTCFKRNDKREVKGAQLAGSVAEMSSYHHGEASLMMTIINLAQ 774

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD +L +L +D 
Sbjct: 775  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPVDDNVLRFLYDDN 834

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WYMPIIP VL+NG+EGIGTGWS  IPN++ R+ V N+R LL+G+   PM P Y+
Sbjct: 835  QRVEPEWYMPIIPMVLINGAEGIGTGWSCKIPNFDIRETVNNIRCLLDGKEPLPMLPSYK 894

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y ++G +  ++ TT+ I ELP+R WTQ Y+E  LE ++   ++
Sbjct: 895  NFKGTIDELGPNQ----YVISGEVSILDSTTIEITELPVRTWTQTYKEQVLEPMLNGTEK 950

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +++Y  DTTV F V +SEE +   +  GL K FKL T ++ ++M LFD  G +
Sbjct: 951  TPPLITDYKEYHTDTTVKFVVKMSEEKLAEAEAVGLHKVFKLQTNLTCNSMVLFDHVGFL 1010

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY++P+ IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  ++G+IV+ N+ 
Sbjct: 1011 KKYESPQDILKEFFELRLRYYGLRKEWLIGMLGAESAKLNNQARFILEKIDGKIVIENKP 1070

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAI 1136
            + +L+  L Q+G+      S  ++A       E EE +E+ E        D++YLL+M +
Sbjct: 1071 KKELIQVLIQRGY-----ESDPVKAWKELQNKEEEEGDESGEESAAATGPDFNYLLNMPL 1125

Query: 1137 GTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERM 1196
              LT EK   L   RD  ++E++DL+  +P  LW +DL A    ++ELD  +A+  ++ M
Sbjct: 1126 WYLTKEKKDELCKQRDNKDKELEDLKHKSPSDLWKEDLAAF---VEELDAVEAKQMQDEM 1182

Query: 1197 KIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNAR---ATEAMGEMDNVTKVVKPKGRAGL 1253
                   G  G  +  K   +  ++   K+  A    +   +  +  VT  +K +    +
Sbjct: 1183 A------GITGKPLKVKGGKQGGKQKVTKAQLAEVMPSPHGIRVVPRVTAEMKAEAEKRI 1236

Query: 1254 KKA-PAEKLDDDE--------EDEVPDLKQRLAKLNEQLASTKLE--------------P 1290
            KK   +EK + DE        + E   LKQRLA+  +    TK +              P
Sbjct: 1237 KKKIKSEKNESDEKQEGNSSGDKEPSSLKQRLAQKRKAEQGTKRQTTLPFKPIKKMKRNP 1296

Query: 1291 SPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIAAPEEG 1350
              D     E++  +VP+K++   ++ AA+ K +    SD++   +   DE  E     EG
Sbjct: 1297 WSDSESDSESDDFEVPSKRERVVRQAAAKIKPMVNSDSDAD---LTSSDEDSEYQENSEG 1353

Query: 1351 KKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASL----GQRLLTEMLKPAESSPEKKVR 1406
                   +        A   +K+G A K++P         Q +  E      ++P   V 
Sbjct: 1354 NTDSDTTSKKKPPKAKAVPKEKKGKAPKEKPLPDAVPVRVQNVAAESASQDPAAPPVSVP 1413

Query: 1407 KMRASPFNKKSGSMLGRAGTIEEPSGSSPSTSEEVAEVLPPKARPQRANRRQA 1459
            + +A P  K + +  G      +PS     T ++ A    PKA P+RA R ++
Sbjct: 1414 RAQAVP-KKPAAAKKGSTAKDNQPSIMDILTKKKAA----PKA-PRRAQREES 1460


>gi|358417405|ref|XP_001254458.3| PREDICTED: DNA topoisomerase 2-alpha [Bos taurus]
 gi|359076890|ref|XP_002696055.2| PREDICTED: DNA topoisomerase 2-alpha [Bos taurus]
          Length = 1530

 Score = 1184 bits (3063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1230 (50%), Positives = 825/1230 (67%), Gaps = 88/1230 (7%)

Query: 8    PLTTSNNANVVGPTAPNK------TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIY 61
            PL   N    V  T  N+      +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y
Sbjct: 5    PLQPVNENMQVSKTKKNEDAKKRLSIERIYQKKTQLEHILLRPDTYIGSVESVTQQMWVY 64

Query: 62   EEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGD 121
            +E+   + +R ++YVPGLYKIFDEILVNAADNKQRDPKM  +++ ID E++LIS+ N+G 
Sbjct: 65   DEDI-GINYREVTYVPGLYKIFDEILVNAADNKQRDPKMSCIRITIDPENNLISIWNNGK 123

Query: 122  GVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 181
            G+PV  H+ E +YVP LIFG LLTSSNYDD  KK TGGRNGYGAKL NIFST+F +ETA 
Sbjct: 124  GIPVVEHKVEKMYVPALIFGQLLTSSNYDDEEKKVTGGRNGYGAKLCNIFSTKFTVETAS 183

Query: 182  GKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKR 241
             +  K +KQ + +NMGK  E  + K   G+++T ++F PDL+KF M  L+ D+VALM +R
Sbjct: 184  REYKKMFKQTWMDNMGKAGEMEL-KPFSGEDYTCITFHPDLSKFKMQSLDKDIVALMVRR 242

Query: 242  VVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICV 293
              D+AG   K VKV LNG+R+PVK F  YVD+Y K         +   HE+VN RWE+C+
Sbjct: 243  AYDIAGST-KDVKVYLNGNRLPVKGFRSYVDLYLKDKVDETGNPLKVIHEQVNHRWEVCL 301

Query: 294  TLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLW 352
            T+SE  FQQ+SFVN IAT KGG HVDYVA+Q+   ++ VV KKNK    VKAH VKNH+W
Sbjct: 302  TMSEKGFQQISFVNSIATSKGGRHVDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMW 361

Query: 353  VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS 412
            +FVNALI+NP FDSQTKE +TL+  SFGS C+LSE+F+K      GIVE++L+W  FK  
Sbjct: 362  IFVNALIENPTFDSQTKENMTLQVKSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQ 420

Query: 413  KDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDR 471
              L KK    K   ++GI KL+DAN AGGRNS +CTLILTEGDSAK LA++GL VVGRD+
Sbjct: 421  IQLNKKCSAVKHNRIKGIPKLDDANDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDK 480

Query: 472  FGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMT 528
            +GVFPLRGK+LNVREAS  Q++ N+EI NI KI+GL+    Y   +++K+LRYG +MIMT
Sbjct: 481  YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMT 540

Query: 529  DQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLV 588
            DQ                            D DGSHIKGLLINFIH  WPSLL+   FL 
Sbjct: 541  DQ----------------------------DQDGSHIKGLLINFIHHNWPSLLR-HRFLE 571

Query: 589  EFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQ 648
            EFITPIVK + KN + ++FYS+P++E WK S   N   W +KYYKGLGTSTSKE KEYF 
Sbjct: 572  EFITPIVKVS-KNKQEMAFYSLPEFEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFA 629

Query: 649  NITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHL-DQK 696
            ++  H+  F +   +D  AI LAFSKK+ + RK+WL  F            P ++L  Q 
Sbjct: 630  DMKRHRIQFKYSGPEDDAAISLAFSKKQTDDRKEWLTHFMEDRRQRKLLGLPDDYLYGQA 689

Query: 697  EKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSG 756
              Y+ Y+DF+NKELILFS +D +RSIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G
Sbjct: 690  TTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAG 749

Query: 757  YVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTR 816
             V+E S+YHHGE SL  TI+ +AQ+FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT 
Sbjct: 750  SVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTM 809

Query: 817  LSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNP 876
            LSP+ R LFP  DD  L +L +D Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ 
Sbjct: 810  LSPLARLLFPAKDDHTLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDV 869

Query: 877  RDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKE 936
            R++V N+RRL++GE   PM P Y+ F GT+E+ A  +    Y ++G +  +N TT+ I E
Sbjct: 870  REVVNNIRRLMDGEEPLPMLPSYKNFKGTVEELAPNQ----YVISGEVAILNSTTIEISE 925

Query: 937  LPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGL 992
            LPIR WTQ Y+E  LE ++   ++    I  +R+Y  DTTV F V ++EE +   ++ GL
Sbjct: 926  LPIRTWTQTYKEQVLEPMLNGTEKTPPLITDYREYHTDTTVKFVVKMTEEKLAEAERAGL 985

Query: 993  LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
             K FKL T+++ ++M LFD  G +KKYDT   IL +FF +RL++Y  RK+  L  L  E 
Sbjct: 986  HKVFKLQTSLTCNSMVLFDHVGCLKKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAES 1045

Query: 1053 LKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP---------KNSKSIEAVV 1103
             KL N+ RFIL  ++G+I++ N+ + +L+  L Q+G+   P         K     E   
Sbjct: 1046 AKLNNQARFILEKIDGKIIIENKPKKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEE 1105

Query: 1104 AGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
            + +  ETE+S+   +         ++YLL M +  LT EK   L   R++  +E++ L++
Sbjct: 1106 SDSEKETEKSDSATD-----SGPTFNYLLDMPLWYLTKEKKDELCKLRNEKEQELETLKR 1160

Query: 1164 ATPESLWVKDLDALDMQLDELDKSDARAEE 1193
             +P  LW +DL A   +L+ ++  + + E+
Sbjct: 1161 KSPSDLWKEDLAAFVEELEVVEAKEKQDEQ 1190


>gi|387593505|gb|EIJ88529.1| DNA topoisomerase II [Nematocida parisii ERTm3]
 gi|387597159|gb|EIJ94779.1| DNA topoisomerase II [Nematocida parisii ERTm1]
          Length = 1182

 Score = 1184 bits (3062), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 603/1171 (51%), Positives = 799/1171 (68%), Gaps = 77/1171 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+EE+YQKK+ +EH+LLRPDTYIGS++  T+ ++++  +   M+ + ++Y PGLYKIFD
Sbjct: 6    KTVEEIYQKKTPIEHVLLRPDTYIGSVQPETRTMYVWCADKMKMVRKEVTYTPGLYKIFD 65

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RD +M  +++ +D ++  ISV N G G+PV IH +E VYVPELIFGHLL
Sbjct: 66   EILVNAADNKTRDKRMKEIRIDVDIKNSTISVSNDGQGIPVVIHAKENVYVPELIFGHLL 125

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD  KK TGGRNGYGAKL NIFST+F+IETAD K  KK++QV+TNNM KK EP I
Sbjct: 126  TSSNYDDAEKKMTGGRNGYGAKLCNIFSTKFVIETADKKNKKKFRQVYTNNMLKKEEPEI 185

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
                 G+ +T+V+F+PDLAKF+M  ++DD ++L+ KRV DLAG +G  + V  NG ++PV
Sbjct: 186  EPFT-GEEYTRVTFQPDLAKFSMKRIDDDFMSLIMKRVYDLAGTVG-DISVYFNGEKIPV 243

Query: 265  KSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQ 324
             +F EY+ ++  +          RWEI   L + QFQ VSFVN I+T +GGTHV+Y+A+Q
Sbjct: 244  SNFREYIKLFFDNDVEIVYESKGRWEIAYVLGDEQFQHVSFVNRISTPRGGTHVNYIADQ 303

Query: 325  VANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE 384
            + + V+    K  K   V+   VK ++++F+N LI+NPAFDSQTKETLTL+QSSFGSK  
Sbjct: 304  IVSAVVEQAKKVEKGLVVRPIQVKANIFLFLNCLIENPAFDSQTKETLTLKQSSFGSKHT 363

Query: 385  LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSE 444
            L  +F+ ++  KSGIVE     A  KQ++ LKK DG KT  +RGI KL+DAN AG R + 
Sbjct: 364  LGSKFISEI-MKSGIVEKSAYAARAKQTQQLKKTDGHKTSKLRGIPKLDDANNAGTRYAA 422

Query: 445  QCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKI 504
            QCTLILTEGDSAK+LA++GLSV+GRD +GVFPLRGKLLNVREA+  Q++ N EI NIKKI
Sbjct: 423  QCTLILTEGDSAKSLAVSGLSVIGRDNYGVFPLRGKLLNVREATHKQLMENMEINNIKKI 482

Query: 505  LGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSH 564
            +GL+ G EY   +SLRYGHLMIMTDQ                            DHDGSH
Sbjct: 483  MGLQHGKEYATTESLRYGHLMIMTDQ----------------------------DHDGSH 514

Query: 565  IKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNA 624
            IKGL+IN +  F+PSLLKI  FL EFITPIV+AT K      F+++P++E+W E+  G  
Sbjct: 515  IKGLIINMLDHFFPSLLKIKGFLQEFITPIVRAT-KGSMSRDFFTIPEFESWCETSEGRE 573

Query: 625  SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
            + W IKYYKGLGTST+K+ K+YF N+  H K+F+  D  D + IELAFSKK+IE+RK WL
Sbjct: 574  NGWKIKYYKGLGTSTAKDAKDYFSNLDFHIKEFIPMDSTDRDKIELAFSKKRIESRKVWL 633

Query: 685  LQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRN 744
             +F PG +LD + + I   +F+++ELI FS+AD  RSIP+++DG+KPGQRKI++C FKR 
Sbjct: 634  KEFVPGTYLDNRVQAISIKNFIDRELIHFSLADNIRSIPNVIDGMKPGQRKIIYCCFKRQ 693

Query: 745  FIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGG 804
               E KVAQ +GYVSEHSAYHHGEQSL STI+ +AQD+VGSNNI LLQP GQFGTR QGG
Sbjct: 694  LKSEIKVAQLAGYVSEHSAYHHGEQSLCSTIVNLAQDYVGSNNIPLLQPIGQFGTRLQGG 753

Query: 805  KDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIG 864
            KDAAS RYIFT L  ITR++F + DD LL+YL +D   +EP  Y+PIIP VLVNGSEGIG
Sbjct: 754  KDAASPRYIFTALQQITRYIFREQDDHLLNYLKDDNLMVEPDMYIPIIPMVLVNGSEGIG 813

Query: 865  TGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGII 924
            TGWS+ IP+YNP +IV NV+R++NG   E M PWY+GF G  E       G  Y  TG  
Sbjct: 814  TGWSTCIPSYNPIEIVDNVKRMINGHEPEDMMPWYKGFAGECEDLG----GGKYRTTGTF 869

Query: 925  EEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESM 984
            E +    + I ELPI  WTQ+Y++FLE++I+  D  I+ FR+Y+ DT V FEV +S++ +
Sbjct: 870  E-LETGKINILELPIGTWTQNYKDFLETLIESGD--IKDFREYNTDTKVYFEVIVSKQKV 926

Query: 985  MRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQ 1044
                   + K FKL++ IST+NM  F+SKGV++KY +P +IL+EF+ +R + Y +RK   
Sbjct: 927  ------NVPKVFKLSSQISTANMVAFNSKGVLQKYTSPSEILKEFYPVRRDLYVRRKDFL 980

Query: 1045 LENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVA 1104
            L+ L +E+  LENKVRFI  VV   + +  RK  D++ EL  K +T              
Sbjct: 981  LKKLNVEMTILENKVRFIKEVVADTLKIVKRKSADIVKELTDKEYT-------------- 1026

Query: 1105 GATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKA 1164
                     ++N           YDYLL+M+I +LT+E++  L  +     +E + L+  
Sbjct: 1027 --------KKDN----------SYDYLLTMSIASLTVERIDKLENESSTKRKEYNTLKNI 1068

Query: 1165 TPESLWVKDLDALDMQLDELDKSDARAEEER 1195
            + E +W+ DLD     LD   K+D     +R
Sbjct: 1069 SIEDMWISDLDEFLKHLDLSVKNDDNPRPKR 1099


>gi|302659966|ref|XP_003021668.1| hypothetical protein TRV_04248 [Trichophyton verrucosum HKI 0517]
 gi|291185576|gb|EFE41050.1| hypothetical protein TRV_04248 [Trichophyton verrucosum HKI 0517]
          Length = 1680

 Score = 1183 bits (3060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1302 (48%), Positives = 855/1302 (65%), Gaps = 86/1302 (6%)

Query: 15   ANVVGPTAPNKTIE-----EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI 69
            ANV   +   +T+E     E YQK +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M 
Sbjct: 109  ANVENGSFATETVEGGGSSEKYQKITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELME 168

Query: 70   HRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQ 129
            +R +S+VPGLYKIFDEILVNAADNKQ DP M  ++V +D+E   ISV N+G G+PVEIH+
Sbjct: 169  YREVSFVPGLYKIFDEILVNAADNKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHK 228

Query: 130  EEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYK 189
            +E  Y+PELIFGHLLTSSNY+D  +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K
Sbjct: 229  KEQTYIPELIFGHLLTSSNYNDMQEKVTGGRNGYGAKLCNIFSNEFTVETADSKQKKKFK 288

Query: 190  QVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCL 249
              +TNNM    +  I++CK GD++TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  
Sbjct: 289  LTWTNNMSTMGKAKITECK-GDDYTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTC 347

Query: 250  GKSVKVELNGHRVPVKSFAEYVDMYPKSVTR---------------FHERVNERWEICVT 294
            G +VK  LNG R+P+KSF +Y++MY K++                   E  + RWEI  T
Sbjct: 348  GTAVK--LNGTRIPIKSFKKYMEMYTKAIKAERGEDPTSASDKNDIITESPDRRWEIGFT 405

Query: 295  LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWV 353
            +S+G FQQVSFVN IAT  GGTHV+Y+++Q+ N +   + KKNK  A +KA  +KNH+++
Sbjct: 406  VSDGSFQQVSFVNSIATTSGGTHVNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFL 465

Query: 354  FVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSK 413
            FVN+ I NPAF SQTKE LT R S FGSKC +S++FLKKV  K+ +++ +L +A  K  +
Sbjct: 466  FVNSQIVNPAFTSQTKEQLTTRPSQFGSKCVVSDDFLKKVM-KTRVMDDILHFAEKKADQ 524

Query: 414  DLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFG 473
             LKK DG +   +    KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FG
Sbjct: 525  ILKKTDGNRRSRMNN-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFG 583

Query: 474  VFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLL 533
            VFPLRGKLLNVR+AS +Q+  N+EI NIK  +GL+   EY + + LRYGHLMIMTDQ   
Sbjct: 584  VFPLRGKLLNVRDASVDQISKNAEIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ--- 640

Query: 534  APLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITP 593
                                     DHDGSHIKGLLIN++   +P+LLKIP FL+EFITP
Sbjct: 641  -------------------------DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITP 675

Query: 594  IVKATNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
            IVK    + K      SF+++P+YE WKE+   +   W  KYYKGLGTS++++ + YFQ+
Sbjct: 676  IVKVWKGDPKNPTHSKSFFTIPEYEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQIYFQD 734

Query: 650  ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKE 709
            +  H K F    D++ E IELAFSKKK + RK+WL QF+PG +LD     I Y+DF+NKE
Sbjct: 735  LDRHLKQFHTLQDKEAELIELAFSKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINKE 794

Query: 710  LILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQ 769
            LILFSMAD  RSIPS+VDGLKPGQRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ 
Sbjct: 795  LILFSMADNIRSIPSVVDGLKPGQRKVLYTMFKRNVRKDIKVVELAGYVSGMTAYQHGDN 854

Query: 770  SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
            SL +TI+G+AQ FVGSNNIN L+P+G FG+R QGG D+ASARYI+TRLSP  R LF + D
Sbjct: 855  SLHTTIVGLAQTFVGSNNINCLEPSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQAD 914

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
            + LL    +DG+ IEP  Y+P++P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ G
Sbjct: 915  EPLLVNNVDDGKVIEPETYVPVVPLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMVG 974

Query: 890  EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREF 949
            E + PM PW+RGF G +       +G  Y  +GII++  +  + I ELPIR WTQD+++ 
Sbjct: 975  EELVPMKPWFRGFKGEVSG-----SGDRYKFSGIIKQTADNEVEITELPIRTWTQDFKDK 1029

Query: 950  LESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
            LE II  ++  SFI+ ++ Y+  T V F + + E+ M +  +EGL +KFKL   I+TSNM
Sbjct: 1030 LEEIIKAEKVPSFIKDYKDYNTHTNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNM 1089

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVN 1067
              FD++G I +Y+TPE IL  F+ +R++ YEKRK+  L  L+ +L KL N+ RF+  +++
Sbjct: 1090 VAFDAEGRITRYETPEDILRAFYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIID 1149

Query: 1068 GEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID 1127
            GE+V++ +K+  L+ EL++KGF PFPK   + E   AG  +E E+ EE       V S  
Sbjct: 1150 GELVISKKKKAVLIQELQEKGFKPFPKVVGTPEPGEAGDVEEEEDEEEE-TTTAAVSSDA 1208

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD-ELDK 1186
            YDYLLSM + +LT E+V  L         EVD L K T E LW KDLD    +   +L+ 
Sbjct: 1209 YDYLLSMPLWSLTQERVDKLRRQIGDKEMEVDALIKLTKEDLWRKDLDEFISEWRFQLED 1268

Query: 1187 SDARAEEERMKIKGNGNG-----DAGPKIVAKRAPKNARKND--------KKSNNARATE 1233
             D R    R KI   G         G +  A +  K    +D        KK+   R   
Sbjct: 1269 EDNR----RKKIASRGRRLSSKVKTGSRATAAKKRKAGSGDDSDFDVPKGKKATVNRIQP 1324

Query: 1234 AMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQR 1275
              G +D ++K  KPK +A  +   A+  DD E++ +P  K R
Sbjct: 1325 KGGLLDFLSK-AKPKPKATSRVDGADDSDDFEDEVMPKPKSR 1365


>gi|291234700|ref|XP_002737286.1| PREDICTED: DNA topoisomerase II, beta isozyme-like [Saccoglossus
            kowalevskii]
          Length = 1649

 Score = 1182 bits (3059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1200 (52%), Positives = 815/1200 (67%), Gaps = 74/1200 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEE---SKTMIHRTISYVPGLYKI 82
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++ +   +  + +R I++VPGLYKI
Sbjct: 40   SVERIYQKKTQLEHILLRPDTYIGSVEPLTQNMWVFDNDIGDNGGLCYREITFVPGLYKI 99

Query: 83   FDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
            FDEILVNAADNKQRD KMD +K+ ID +++ ISV N+G G+PV  HQ E V+VP LIFGH
Sbjct: 100  FDEILVNAADNKQRDAKMDCIKITIDPDNNQISVWNNGKGIPVVEHQTEKVFVPTLIFGH 159

Query: 143  LLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP 202
            LLTSSNY+D+ +K TGGRNGYGAKL NIFS++F + TA  +  K++KQV+ NNM K SEP
Sbjct: 160  LLTSSNYNDDERKVTGGRNGYGAKLCNIFSSKFTVTTASMEYHKQFKQVWKNNMDKASEP 219

Query: 203  NISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
             I K  +G ++T+VSF+PDL+KF M  L+ D VAL+ +R  D+AG + K VKV LNG R+
Sbjct: 220  AI-KSFDGKDFTEVSFQPDLSKFKMEKLDKDTVALLTRRAYDIAG-INKGVKVYLNGKRL 277

Query: 263  PVKSFAEYVDMYPKSVTR--------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKG 314
            PVKSF +YVD+Y K  T          HE  NERWE+C+TLSE  F QVSFVN IAT KG
Sbjct: 278  PVKSFKDYVDLYVKDKTDENDQPLKVVHEICNERWEVCITLSEKGFNQVSFVNSIATTKG 337

Query: 315  GTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            G HVDYV +++   V+ VV KKNK   N++   +KNH+WVFVN L++NP FDSQTKE +T
Sbjct: 338  GRHVDYVVDRIVEKVIDVVKKKNKGGINIRPFQIKNHIWVFVNCLVENPTFDSQTKENMT 397

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKL 432
            L+   FGS C+LS++F+K+ T   GIVE++++W  FK    L KK    K   +RGI KL
Sbjct: 398  LQVKKFGSVCKLSDKFIKQ-TLTCGIVESIMNWVKFKAQNLLNKKCSAAKHSKLRGIPKL 456

Query: 433  EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
            +DAN AG +NS+ CTLILTEGDSAK LA++GLS+VGRD++GVFPLRGKLLNVREA+  Q+
Sbjct: 457  DDANDAGTKNSKDCTLILTEGDSAKTLAVSGLSIVGRDKYGVFPLRGKLLNVREATHKQI 516

Query: 493  LNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
            + N+EI N+ KI+GL+    Y++   +K+LRYG LMIMTDQ                   
Sbjct: 517  MENAEINNVIKIMGLQYKKSYDSDDALKTLRYGKLMIMTDQ------------------- 557

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYS 609
                     D DGSHIKGLL+NFIH  WPSLLK   FL EFITPIVKAT K  +V +FYS
Sbjct: 558  ---------DQDGSHIKGLLVNFIHHNWPSLLK-HKFLEEFITPIVKAT-KGKEVFTFYS 606

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            +P++E WK+    N  +W +KYYKGLGTST+KE KEYF ++  H+  F +   QD  AI 
Sbjct: 607  LPEFEEWKKETP-NHHTWRVKYYKGLGTSTNKEAKEYFSDMVRHRIPFKYVGPQDDAAIT 665

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKE-------------KYIKYSDFVNKELILFSMA 716
            LAFSKKK + RK+WL  +  G    ++E             +YI Y+DFVNKEL+LFS  
Sbjct: 666  LAFSKKKTDERKEWLTDW-LGERKKRREDGLSDLYLYNKDTRYISYNDFVNKELVLFSNM 724

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D +RSIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+EHSAYHHGE SL  TI+
Sbjct: 725  DNERSIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEHSAYHHGEASLMGTII 784

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQ+FVGSNN+NLLQP GQFGTR  GGKDAAS RYIFT LSP+ R L P  DD  L  L
Sbjct: 785  NLAQNFVGSNNLNLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARLLMPASDDPNLTQL 844

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +D Q+IEP WY PIIP VLVNG+EGIGTGWS+ I NY+ R+IVAN+R +++GE   PM 
Sbjct: 845  FDDNQRIEPEWYCPIIPMVLVNGAEGIGTGWSTKIANYDVREIVANIRLMIDGEEPLPML 904

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIID 955
            P Y+G+ G IE+  +      Y  +G I  V+  TL I ELP+R WTQ Y+E  LE ++ 
Sbjct: 905  PSYKGYKGAIEEIEANR----YACSGEIAIVDNNTLEITELPVRVWTQVYKETVLEPMLH 960

Query: 956  QNDS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDS 1012
             ++     I  +++Y  DTTV   V +S+E +++ +++GL K FKL  TIS +N  LFDS
Sbjct: 961  GSEKVQPLITDYKEYHTDTTVKIVVKMSDEKLLKAEEQGLHKVFKLQNTISVTNSVLFDS 1020

Query: 1013 KGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVV 1072
             G IKKYD   +IL+EFF +RLE Y  RK+     L  E  KL+N+ RFIL  +  +IV+
Sbjct: 1021 HGCIKKYDDIMEILKEFFELRLERYRIRKEYLEGLLAAESNKLDNQARFILEKIENKIVI 1080

Query: 1073 NNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLL 1132
             N+ + DL+  L Q+G+   P  +   E+      DE  +++       G    D++YLL
Sbjct: 1081 ENKSKRDLISMLVQRGYDSDPIKAWK-ESQNRNNEDEDSDTDSMYSSATG-GGPDFNYLL 1138

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1192
             MA+ +L+ E+   LL +RD    E++ LR  TP  LW++DLDA   +L+E++  +   E
Sbjct: 1139 GMALWSLSKERKDELLKNRDTKAAELEVLRDKTPSDLWIEDLDAFSAKLEEVEAQEKEDE 1198


>gi|403345854|gb|EJY72307.1| DNA topoisomerase 2 [Oxytricha trifallax]
          Length = 1410

 Score = 1182 bits (3059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 641/1321 (48%), Positives = 856/1321 (64%), Gaps = 76/1321 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
             IEE+YQKK+QLEHILLRPDTYIGSIE + Q LW+Y++++  + ++ + YVPGLYKIFDE
Sbjct: 13   AIEEIYQKKTQLEHILLRPDTYIGSIEMYQQYLWVYDKDNDRIDYKQVQYVPGLYKIFDE 72

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADN Q DP M+ +KV ID E + I V N+G G+PV+IH+    YVP++IFG LLT
Sbjct: 73   ILVNAADNFQNDPTMNLIKVEIDPEQNKIQVWNNGKGIPVQIHKVHNCYVPDMIFGQLLT 132

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+DN KK TGGRNG+GAKL NIFS +FI+ETAD K  K YKQV+ NNM  + EP I+
Sbjct: 133  SSNYNDNKKKVTGGRNGFGAKLANIFSNKFIVETADSKNKKCYKQVWKNNMSIREEPKIT 192

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
               + D++T V+F PDL +  M  L++D+V+LM KRV D+AGC   +V+V+LNG  + +K
Sbjct: 193  DNSKNDDYTCVTFYPDLRRLGMEVLDNDIVSLMTKRVYDMAGCTPANVRVKLNGKSIEIK 252

Query: 266  SFAEYVDMY---------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            +F  Y D+Y         PK V ++ +    RWEI  +LS+GQFQQVSFVN I TIKGG+
Sbjct: 253  NFNTYCDLYLKNDETKQLPKIVEKYDQ--GARWEIIASLSDGQFQQVSFVNSICTIKGGS 310

Query: 317  HVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            HV+Y+A+Q+   +  V+ KK+K  ++K H +K++LW+FVN LI+NPAFDSQTKETLT + 
Sbjct: 311  HVNYIADQIVEKISEVLKKKHKGVDIKPHQIKSNLWLFVNCLIENPAFDSQTKETLTTKP 370

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN--DGTKTEDVRGISKLED 434
            +SFGS C L+E+FLK + A SGI+E+++S A  K+   L +N   G K   + GI KLED
Sbjct: 371  NSFGSTCTLTEKFLKDILA-SGIIESIVSVAKAKEEAKLVRNLNQGKKKSKLMGIPKLED 429

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG +++  CT+ILTEGDSAK+LA+AG+ VVGRD+FGVFPLRGK LNVREA S Q+++
Sbjct: 430  ANDAGTKHARDCTIILTEGDSAKSLALAGIEVVGRDKFGVFPLRGKFLNVREAGSKQIMD 489

Query: 495  NSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N EI N+ KI+GLK G +Y    ++  LRYG LMIMTDQ                     
Sbjct: 490  NPEIQNLIKIIGLKIGKKYEVDADLNDLRYGKLMIMTDQ--------------------- 528

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   DHDGSHIKGLLINFIH FWP+L++   F+ EF+TPI+KAT K  +V SF+++P
Sbjct: 529  -------DHDGSHIKGLLINFIHFFWPTLMRNNGFVREFVTPIIKAT-KGNEVYSFFTIP 580

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +YE W +  G N   W IKYYKGLGTS++KE KEYF  I  H+ +F + D++D E I+LA
Sbjct: 581  EYEQWAD--GRNLKGWKIKYYKGLGTSSAKEAKEYFSAIDNHQIEFEYVDNEDEEVIDLA 638

Query: 672  FSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKP 731
            F+KK  + RK WL  +    ++D  + +++Y DFVNKELILFS+AD  RSIP++ DGLKP
Sbjct: 639  FNKKLADKRKDWLTTYRTDLYVDHSQTHLRYKDFVNKELILFSVADCLRSIPNLCDGLKP 698

Query: 732  GQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLL 791
            GQRKILFC FK+    E KVAQ  GYV E+SAYHHGEQSL  TI+ MAQ+FVGSNNINLL
Sbjct: 699  GQRKILFCVFKKKLKDEIKVAQLVGYVGENSAYHHGEQSLCQTIITMAQNFVGSNNINLL 758

Query: 792  QPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPI 851
             P GQFGTRNQGGK+AAS RYIFT L+P+TR +FP++DD +L+YL E+GQ IEP +Y+PI
Sbjct: 759  LPLGQFGTRNQGGKEAASPRYIFTNLNPVTRTIFPQEDDAVLNYLEEEGQSIEPDYYLPI 818

Query: 852  IPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTAS 911
            IP  LVNG+EGIGTGWS++IP +NP+DIV N++R++ GE  + M PWY+G+ G+IE    
Sbjct: 819  IPMCLVNGAEGIGTGWSTFIPCHNPKDIVDNLKRMMKGEPYQTMRPWYKGYLGSIETLQG 878

Query: 912  KEAGVTYTVTGIIEEVNE-TTLRIKELPIRRWTQDYREFLESIID-QNDSFIRGFRQYSD 969
             + G  Y V G  E +++  +L I ELPI +WT+DY+ FLE + D +N   +   R+   
Sbjct: 879  GKNG--YLVRGNYEVLDDGMSLVITELPIGKWTRDYKTFLEELADVKNGEIVDEIRELHT 936

Query: 970  DTTVDFEVFLSEESMMRTK-QEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
            +  V F V  +   +   + +EG+ KKFKL+TT+S++N  LFD +G I+KY   E I+ E
Sbjct: 937  ENRVHFIVKCNPGKLQDIEAKEGIEKKFKLSTTLSSANYVLFDYQGKIRKYAGEEYIVRE 996

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            FF +R   Y +RK   L  L  E   +ENK+RFIL ++N +I +N  K+  ++ +LR+ G
Sbjct: 997  FFGLREALYHRRKDYILARLRKEFETIENKMRFILAIINEDIKINRVKKKIIVAKLREMG 1056

Query: 1089 F-TPFPKNSKSIEAVVAGATDETEESEENPE--------VVNGVQSI-DYDYLLSMAIGT 1138
            F T    N    E        ++EE  EN E        V  G  S+ +YDYLL+M + +
Sbjct: 1057 FKTASEINDILPEKKRITLRQDSEEQSENMENAQIQEEIVAPGELSLREYDYLLNMPVMS 1116

Query: 1139 LTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKI 1198
            LT EKV  L     +   E D L       LW  DLD     L  L+K +   E++R   
Sbjct: 1117 LTDEKVDELDRQLKEKKAEYDKLFAMHIFELWENDLDNF---LIALEKQNELEEKDR-NA 1172

Query: 1199 KGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKAPA 1258
             G  NG +G +   K+        DK+  N R     G         KP   A   + P 
Sbjct: 1173 YGASNGGSGKRKGGKKGTTAGGGKDKE--NGRTARGQGNAGGARGGRKPNNDASHSRKPQ 1230

Query: 1259 EKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRTAA 1318
             K +   E   PD       LNE+L    L  +P Q    + +  Q   K  +P +R A 
Sbjct: 1231 TKQEPQIE---PDFN---IPLNERLRLRAL-AAPSQGPSAKLQPQQSILKALDPQEREAM 1283

Query: 1319 Q 1319
            Q
Sbjct: 1284 Q 1284


>gi|344288185|ref|XP_003415831.1| PREDICTED: DNA topoisomerase 2-beta-like [Loxodonta africana]
          Length = 1742

 Score = 1182 bits (3057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1199 (51%), Positives = 817/1199 (68%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+++   M  R +++VPGLYKIFDE
Sbjct: 168  SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDDDV-GMNCREVTFVPGLYKIFDE 226

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E V+VP LIFG LLT
Sbjct: 227  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVFVPALIFGQLLT 286

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD  KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 287  SSNYDDEEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 345

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 346  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 404

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 405  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 464

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 465  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 524

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F+K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 525  KSFGSKCQLSEKFIK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 583

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S  CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 584  NDAGGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 643

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 644  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 681

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 682  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 733

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 734  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 792

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 793  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 852

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+L+  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 853  SIPSLVDGFKPGQRKVLYTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 912

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 913  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAMDDNLLKFLYDDN 972

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 973  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 1032

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 1033 NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 1088

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 1089 TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1148

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1149 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESSKLNNQARFILEKIQGKITIENRS 1208

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   ++T+   ++    +G  +  D++YLL+M+
Sbjct: 1209 KRDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDTQNQHDDSSSDSGTPAGPDFNYLLNMS 1268

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + +LT EKV+ L+  RD    EV D+++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1269 LWSLTKEKVEELIKQRDTKGREVSDVKRKSPSDLWREDLAAF---IEELDKVEAQERED 1324


>gi|154270939|ref|XP_001536323.1| DNA topoisomerase 2 [Ajellomyces capsulatus NAm1]
 gi|150409546|gb|EDN04990.1| DNA topoisomerase 2 [Ajellomyces capsulatus NAm1]
          Length = 1808

 Score = 1181 bits (3055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1187 (51%), Positives = 793/1187 (66%), Gaps = 81/1187 (6%)

Query: 19   GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPG 78
            G TAP K   E YQK +QLEHI+ RPDTYIGSIE+ T  +W+Y  +S +M  R +SYVPG
Sbjct: 127  GATAP-KENSEKYQKLTQLEHIIKRPDTYIGSIERSTNQMWVYNMQSGSMEFRVVSYVPG 185

Query: 79   LYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
            LYKIFDEILVNAADNK  D  MD ++V +D+E   ISV N+G G+P+EIH +E VY+PEL
Sbjct: 186  LYKIFDEILVNAADNKHSDKNMDEIRVTLDRESGQISVWNNGRGIPIEIHAKEKVYIPEL 245

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            +FGHLL+SSNYDDN +K TGGRNGYGAKL NIFSTEF +ETAD K  KKYKQ +T+NM K
Sbjct: 246  VFGHLLSSSNYDDNQQKVTGGRNGYGAKLCNIFSTEFTLETADSKLKKKYKQTWTDNMSK 305

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
              +P I+ CK GD++TKV+F PD  KF M  ++DD  AL+K+RV DLAG     V V+LN
Sbjct: 306  MGKPKITDCK-GDDYTKVTFTPDFKKFGMDGIDDDFEALVKRRVYDLAGTC--KVTVKLN 362

Query: 259  GHRVPVKSFAEYVDMYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSF 305
            G R+P+++F +Y+ MY  ++ +               +  + RWEI   +S+G FQQVSF
Sbjct: 363  GSRIPIRNFKQYMQMYTNAIKKERGEEAAKDKSEIITDNPDPRWEIGFAVSDGSFQQVSF 422

Query: 306  VNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAF 364
            VN IAT  GG+HV+ VA+Q+ N ++  V KKNK  A +K   ++NH++VFVNA I NPAF
Sbjct: 423  VNSIATTSGGSHVNSVADQICNKLVDAVKKKNKTGATLKPAQIRNHIFVFVNAQIVNPAF 482

Query: 365  DSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTE 424
             SQTKE LT + S FGSKC LS+EFLKK+  K+ ++E +L +A  K  + LKK DG +  
Sbjct: 483  TSQTKEQLTTKPSQFGSKCVLSDEFLKKIL-KTQVMENILHFAEKKADQILKKTDGNRRS 541

Query: 425  DVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNV 484
             +    KL DAN AG +    CTLILTEGDSAK LAMAG ++VG D FGVFPLRGKLLNV
Sbjct: 542  RMNN-PKLTDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAIVGPDLFGVFPLRGKLLNV 600

Query: 485  REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            R+AS +Q+  N+EI NIK  LGL+   EY + K LRYGHLMIMTDQ              
Sbjct: 601  RDASVDQISKNAEIQNIKNFLGLQHKKEYTDTKGLRYGHLMIMTDQ-------------- 646

Query: 545  IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV 604
                          DHDGSHIKGLLINF    +PSLLKIP FL+EFITPIVK    + K 
Sbjct: 647  --------------DHDGSHIKGLLINFFQVAFPSLLKIPQFLIEFITPIVKVWKGDPKN 692

Query: 605  LS----FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE 660
             +    F++M +Y+ W+E + G+   W  KYYKGLGTS++ + + YF+++  H K F   
Sbjct: 693  PTISKVFFTMQEYKTWQE-IHGHDKRWEKKYYKGLGTSSTDDAEIYFRDLDKHLKQFHVM 751

Query: 661  DDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQR 720
             D + E I+LAFSKKK + RK+WL QF+PG  LD     I Y+DFVNKELILFSMAD  R
Sbjct: 752  QDHEAELIDLAFSKKKADERKEWLRQFKPGTFLDHTTDEITYTDFVNKELILFSMADNIR 811

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDGLKPGQRK+L+  FKRN  K+ KVA+ SGYV   +AY HGEQSL  TI+G+AQ
Sbjct: 812  SIPSVVDGLKPGQRKVLYTCFKRNVKKDVKVAELSGYVLGMTAYQHGEQSLQQTIIGLAQ 871

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNIN L+P+G FG+R QGG DAAS RYI+TRLSP  R +F + D+ LL Y  +DG
Sbjct: 872  NFVGSNNINCLEPSGNFGSRLQGGSDAASPRYIYTRLSPFARRIFHEADEPLLTYNVDDG 931

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q IEP  Y P++P +L+NG+EGIGTGWS+ IPNYNP +IVAN++RL+ GE + PM PW+R
Sbjct: 932  QVIEPEIYFPVVPMILINGAEGIGTGWSTSIPNYNPEEIVANLKRLMAGEPLVPMEPWFR 991

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQND 958
            GF G +        G  Y  +G I ++ +  + I ELPIR WTQD+++ LE II  ++  
Sbjct: 992  GFTGEVVSM----GGERYKFSGRISQIGDNEVEITELPIRSWTQDFKDRLEEIIKAEKVP 1047

Query: 959  SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKK 1018
            SFI+ ++ Y+  T V F + L E+   +   EGL +KFKLT TI+TSN+  FD +G I K
Sbjct: 1048 SFIKDYKDYNTHTKVHFIIQLDEKYAKKAIAEGLEEKFKLTKTIATSNLVAFDPEGRITK 1107

Query: 1019 YDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRT 1078
            Y++ E+IL EFF +RL+ YEKRK+ QL  ++ +L K+ N+ RF+  +++G+ V++ + + 
Sbjct: 1108 YESVEEILREFFSVRLKLYEKRKQHQLSQMQKDLEKMTNQARFVQMIIDGKFVISKKPKA 1167

Query: 1079 DLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVV----------NGVQSIDY 1128
             L+ EL++KGF PF K S   +A   G         EN  VV            + +  Y
Sbjct: 1168 QLVRELKEKGFKPFAKVS---DAAAKG---------ENAPVVEEDEDDDGEDTEIAANSY 1215

Query: 1129 DYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            DYLL M + +LT E+V+ L         E+D L K + E +W  DLD
Sbjct: 1216 DYLLGMPLWSLTKERVEKLRRQIGDKETEIDTLIKLSKEDIWTADLD 1262


>gi|301779127|ref|XP_002924981.1| PREDICTED: DNA topoisomerase 2-alpha-like [Ailuropoda melanoleuca]
          Length = 1533

 Score = 1181 bits (3055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1201 (51%), Positives = 823/1201 (68%), Gaps = 72/1201 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDI-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDP M  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPNMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKVDETGNPLKIIHEQVNPRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQV 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGGRNSNECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPKDDHTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDIREVVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFPKNS--KSIEAVVAGATDETEESEENPEVVNGVQ--SIDYDYLL 1132
            + +L+  L Q+G+   P  +  ++ + V     +E  ++E   E  + V+     ++YLL
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNENEAEKSDSVRDSGPTFNYLL 1129

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1192
             M +  LT EK   L   R++  +E++ L++ +P  LW +DL A   +L+ ++  + + E
Sbjct: 1130 DMPLWYLTKEKKDELCKLRNEKEQELETLKRKSPSDLWKEDLAAFIEELEAVETKEKQEE 1189

Query: 1193 E 1193
            +
Sbjct: 1190 Q 1190


>gi|410981039|ref|XP_003996880.1| PREDICTED: DNA topoisomerase 2-alpha [Felis catus]
          Length = 1534

 Score = 1181 bits (3055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1226 (51%), Positives = 828/1226 (67%), Gaps = 80/1226 (6%)

Query: 8    PLTTSNNANVVGPTAPNK------TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIY 61
            PL   N   ++  T  N+      +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y
Sbjct: 5    PLQPVNENMLINKTKKNEDAKKRLSIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVY 64

Query: 62   EEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGD 121
            +E+   + +R +++VPGLYKIFDEILVNAADNKQRDPKM  ++V ID E++LIS+ N+G 
Sbjct: 65   DEDI-GINYREVTFVPGLYKIFDEILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGK 123

Query: 122  GVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 181
            G+PV  H+ E +YVP LIFG LLTSSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA 
Sbjct: 124  GIPVVEHKVEKMYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETAS 183

Query: 182  GKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKR 241
             +  K +KQ + +NMG+  E  + K   G+++T ++F+PDL+KF M  L+ D+VALM +R
Sbjct: 184  REYKKMFKQTWMDNMGRAGEMEL-KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRR 242

Query: 242  VVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICV 293
              D+AG   K VKV LNG+++PVK F  YVDMY K         +   HE+VN RWE+C+
Sbjct: 243  AYDIAGST-KDVKVFLNGNKLPVKGFRSYVDMYLKDKVDETGNPLKIIHEQVNPRWEVCL 301

Query: 294  TLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLW 352
            T+SE  FQQ+SFVN IAT KGG HVDY+A+Q+   ++ VV KKNK    VKAH VKNH+W
Sbjct: 302  TMSEKGFQQISFVNSIATSKGGRHVDYIADQIVTKLVEVVKKKNKGGVAVKAHQVKNHMW 361

Query: 353  VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS 412
            +FVNALI+NP FDSQTKE +TL+  SFGS C LSE+F+K      GIVE++L+W  FK  
Sbjct: 362  IFVNALIENPTFDSQTKENMTLQVKSFGSTCHLSEKFIKAAIG-CGIVESILNWVKFKAQ 420

Query: 413  KDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDR 471
              L KK    K   ++GI KL+DAN AGGRNS +CTLILTEGDSAK LA++GL VVGRD+
Sbjct: 421  VQLNKKCSAVKHNRIKGIPKLDDANDAGGRNSNECTLILTEGDSAKTLAVSGLGVVGRDK 480

Query: 472  FGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMT 528
            +GVFPLRGK+LNVREAS  Q++ N+EI NI KI+GL+    Y   +++K+LRYG +MIMT
Sbjct: 481  YGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMT 540

Query: 529  DQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLV 588
            DQ                            D DGSHIKGLLINFIH  WPSLL+   FL 
Sbjct: 541  DQ----------------------------DQDGSHIKGLLINFIHHNWPSLLR-HRFLE 571

Query: 589  EFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQ 648
            EFITPIVK + KN + ++FYS+P++E WK S   N   W +KYYKGLGTSTSKE KEYF 
Sbjct: 572  EFITPIVKVS-KNKQEMAFYSLPEFEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFA 629

Query: 649  NITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHL-DQK 696
            ++  H+  F +   +D  AI LAFSKK+I+ RK+WL  F            P ++L  Q 
Sbjct: 630  DMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQT 689

Query: 697  EKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSG 756
              Y+ Y+DF+NKELILFS +D +RSIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G
Sbjct: 690  TTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAG 749

Query: 757  YVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTR 816
             V+E S+YHHGE SL  TI+ +AQ+FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT 
Sbjct: 750  SVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTM 809

Query: 817  LSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNP 876
            LSP+ R LFP  DD  L +L +D Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ 
Sbjct: 810  LSPLARLLFPPKDDHTLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDI 869

Query: 877  RDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKE 936
            R++V N+RRL++GE   PM P Y+ F GTIE+ A  +    Y ++G +  +N TT+ I E
Sbjct: 870  REVVNNIRRLMDGEEPLPMLPSYKNFRGTIEELAPNQ----YVISGEVAILNSTTIEISE 925

Query: 937  LPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGL 992
            LPIR WTQ Y+E  LE ++   ++    I  +R+Y  DTTV F V ++EE +   ++ GL
Sbjct: 926  LPIRTWTQTYKEQVLEPMLNGTEKTPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGL 985

Query: 993  LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
             K FKL T+++ ++M LFD  G +KKYDT   IL +FF +RL++Y  RK+  L  L  E 
Sbjct: 986  HKVFKLQTSLTCNSMVLFDHVGCLKKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAES 1045

Query: 1053 LKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETE 1111
             KL N+ RFIL  ++G+I++ N+ + +L+  L Q+G+   P K  K  +  V    +  E
Sbjct: 1046 AKLNNQARFILEKIDGKIIIENKPKKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEE 1105

Query: 1112 ESEENPEVVNGVQSID----YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPE 1167
               EN E   G    D    ++YLL M +  LT EK   L   R++  +E++ L++ +P 
Sbjct: 1106 SDNEN-EAEKGDSVKDSGPTFNYLLDMPLWYLTKEKKDELCKLRNEKEQELETLKRKSPS 1164

Query: 1168 SLWVKDLDALDMQLDELDKSDARAEE 1193
             LW +DL A   +L+ ++  + + E+
Sbjct: 1165 DLWKEDLAAFIEELEAVETKEKQEEQ 1190


>gi|225678456|gb|EEH16740.1| DNA topoisomerase [Paracoccidioides brasiliensis Pb03]
          Length = 1788

 Score = 1181 bits (3055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1180 (51%), Positives = 799/1180 (67%), Gaps = 64/1180 (5%)

Query: 19   GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPG 78
            G  AP  +  E YQK +QLEHI+ RPDTYIGSIE+ T  +W+Y  ES+ M +R +SYVPG
Sbjct: 131  GVAAPTDS-SERYQKLTQLEHIIKRPDTYIGSIERSTSQMWVYNSESEAMEYREVSYVPG 189

Query: 79   LYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
            LYKIFDEILVNAADNK  D  MD ++V +++E   ISV N+G G+P+EIH +E +Y+PEL
Sbjct: 190  LYKIFDEILVNAADNKHNDKNMDEIRVTLNRESGEISVWNNGRGIPIEIHAKEKLYIPEL 249

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            IFGHLLTSSNY+D  +K TGGRNGYGAKL NIFSTEF IETAD ++ KKYKQ +TNNM K
Sbjct: 250  IFGHLLTSSNYNDMQQKVTGGRNGYGAKLCNIFSTEFTIETADSRQNKKYKQTWTNNMSK 309

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
              +  I+ CK G ++TKV+F PD  KF M  ++DD  AL+K+RV D+AG     V V+LN
Sbjct: 310  MGKAKITDCK-GQDYTKVTFTPDFKKFGMEGVDDDFEALVKRRVYDMAGTC--KVIVKLN 366

Query: 259  GHRVPVKSFAEYVDMYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSF 305
            G R+PV++F +Y+ MY  ++ +               +  + RWE+   +S+G FQQVSF
Sbjct: 367  GSRIPVRNFKQYMAMYTNAIKKERGEEAAKDKTEILLDNPDPRWEVGFAVSDGSFQQVSF 426

Query: 306  VNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAF 364
            VN IAT  GG+HV+ VA+Q+ N +   V K+NK  A++K   ++NH++VFVN+ I NPAF
Sbjct: 427  VNSIATTSGGSHVNAVADQICNRLAETVKKRNKTGASLKPAQIRNHIFVFVNSQIVNPAF 486

Query: 365  DSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTE 424
             SQTKE LT + S FGSK  LSEEFLKKV  K+ ++E ++ +A  K  + LKK+DG +  
Sbjct: 487  TSQTKEQLTTKPSQFGSKIVLSEEFLKKVI-KTQVMENIMHFAEKKADQILKKSDGNRRS 545

Query: 425  DVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNV 484
             +    KL DAN AG +    CTLILTEGDSAK LAMAG ++VG D FGVFPLRGK+LNV
Sbjct: 546  RMNN-PKLTDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAIVGPDLFGVFPLRGKMLNV 604

Query: 485  REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            R+AS +Q+  N+EI NIK  LGL+   EY + K LRYGHLMIMTDQ              
Sbjct: 605  RDASVDQISKNAEIQNIKNFLGLQHKKEYTDTKGLRYGHLMIMTDQ-------------- 650

Query: 545  IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK- 603
                          DHDGSHIKGLLINF+   +PSLLKIP FL+EFITPIVK    + K 
Sbjct: 651  --------------DHDGSHIKGLLINFLQVAFPSLLKIPQFLIEFITPIVKVWKGDPKN 696

Query: 604  ---VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE 660
                 SF++M +YE WKE + G+   W  KYYKGLGTST+++ + YFQ++  H K F   
Sbjct: 697  PIISKSFFTMQEYETWKE-IHGHDRRWEKKYYKGLGTSTTEDAEIYFQDLDKHLKQFHVM 755

Query: 661  DDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQR 720
             D + + I+LAFSKKK + RK+WL QF+PG  LD   + I Y+DF+NKELILFSMAD  R
Sbjct: 756  QDNEAQLIDLAFSKKKADERKEWLRQFKPGTFLDHTTEEITYTDFINKELILFSMADNIR 815

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDGLKPGQRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL  TI+G+AQ
Sbjct: 816  SIPSVVDGLKPGQRKVLYTCFKRNVRKDIKVVELAGYVSGMTAYQHGDVSLQQTIVGLAQ 875

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
             FVGSNN+N L+P+G FG+R QGG D+ASARYI+TRLSP  R +F   D+ LL Y  +DG
Sbjct: 876  TFVGSNNVNCLEPSGNFGSRLQGGSDSASARYIYTRLSPFARRIFHPADEPLLTYNVDDG 935

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
              IEP  Y+P++P VL+NG++GIGTGWS+ IPNYNP DIVAN++ L++GE + PM PW+R
Sbjct: 936  HTIEPEIYVPVVPLVLINGADGIGTGWSTSIPNYNPEDIVANLKCLMDGEPLVPMQPWFR 995

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQND 958
            GF G +        G  Y  +G I +V E  + I ELPIR WTQD+++ LE II  ++  
Sbjct: 996  GFTGEVVSL----GGERYKFSGRISQVGENEVEITELPIRCWTQDFKDRLEEIIKAEKVP 1051

Query: 959  SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKK 1018
            SFI+ ++ Y+  T V F + L E+   +   EGL +KFKL+ TI+TSN+  FD +G I K
Sbjct: 1052 SFIKDYKDYNTHTKVHFVIQLDEKHAAKAIAEGLEEKFKLSKTIATSNLVAFDPEGRITK 1111

Query: 1019 YDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRT 1078
            YD+PE IL EF+ +R++FYEKRK+ QL  L+ +L KL N+ RFI  +++G++V++ + + 
Sbjct: 1112 YDSPEDILREFYSVRIKFYEKRKQYQLSQLQRDLDKLSNQARFIQMIIDGKLVISKKPKA 1171

Query: 1079 DLLLELRQKGFTPFPKNS---KSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMA 1135
             L+ EL++KGF  F K S   KS E       D+ EE  ++ +   G  S  YDYL +M 
Sbjct: 1172 KLIQELKEKGFKAFSKISDAAKSGETAPVVEEDDNEEKSDSDDAELGADS--YDYLFAMP 1229

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            + +LT E+V+ L     +   EVD+L K + E +W KDLD
Sbjct: 1230 LWSLTQERVEKLRRQIGEKEIEVDNLIKLSKEDIWRKDLD 1269


>gi|296202778|ref|XP_002748606.1| PREDICTED: DNA topoisomerase 2-alpha [Callithrix jacchus]
          Length = 1531

 Score = 1181 bits (3054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1203 (51%), Positives = 820/1203 (68%), Gaps = 76/1203 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDI-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V +D E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTVDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFSGEDYTCITFQPDLSKFKMKSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKLDETGNPLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCHLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS +CTLILTEGDSAK LA++GL VVGRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDRYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKIS-KNKQEMAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYCGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELP+R WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPVRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  +      +D  +E+E+   V +   +  ++Y
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKGDSVTDSGPT--FNY 1127

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R++  +E+D L++ +P  LW +DL A   +L+ ++  + +
Sbjct: 1128 LLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLAAFVEELEAVEAKEKQ 1187

Query: 1191 AEE 1193
             E+
Sbjct: 1188 DEQ 1190


>gi|328724888|ref|XP_001948540.2| PREDICTED: DNA topoisomerase 2-like isoform 1 [Acyrthosiphon pisum]
 gi|328724890|ref|XP_003248280.1| PREDICTED: DNA topoisomerase 2-like isoform 2 [Acyrthosiphon pisum]
          Length = 1537

 Score = 1180 bits (3052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1235 (50%), Positives = 833/1235 (67%), Gaps = 84/1235 (6%)

Query: 10   TTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI 69
            +  N      P +    +EE+YQKKSQLEHILLRPDTYIGS+E  T+++W+Y+ E  +M+
Sbjct: 3    SVENGTPPAAPKSKKTAVEEIYQKKSQLEHILLRPDTYIGSVEPVTESMWVYDTEEDSMV 62

Query: 70   HRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQ 129
             R I+YVPGLYKIFDEILVNAADNKQRD  MD +K+ I++E ++ISV N+G G+PV  H+
Sbjct: 63   QREITYVPGLYKIFDEILVNAADNKQRDQTMDTIKIDINKEENIISVWNNGKGIPVVEHK 122

Query: 130  EEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYK 189
            +E +YVP +IFGHLLTSSNY+D   K TGGRNG+GAKL NIFS +F +ETA  +  K +K
Sbjct: 123  DEKMYVPTMIFGHLLTSSNYNDEEAKVTGGRNGFGAKLCNIFSNKFTVETASREYRKAFK 182

Query: 190  QVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCL 249
            Q + +NM K S+P+I + K  D +TKVSF PDLAKF MT L+ D+V LM +R  D+A   
Sbjct: 183  QTWADNMAKSSDPSIKEVKTTD-YTKVSFSPDLAKFRMTCLDKDIVDLMSRRAYDVAAST 241

Query: 250  GKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQ 301
             + V+V LNG  +P+K+F +YV++Y K         +   +E   +RWE+ VT+S+  F+
Sbjct: 242  -RGVRVYLNGKLLPIKTFQDYVNLYIKGKEDEIGNPLKLVYENAGQRWEVAVTMSDTGFK 300

Query: 302  QVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALID 360
            QVSFVN IAT KGG HVDY+ + +   +  +V K+NK   ++K H VKNHLWVFVN LI 
Sbjct: 301  QVSFVNSIATTKGGRHVDYITDMIVKQLTDIVKKRNKGGMDLKNHQVKNHLWVFVNCLIV 360

Query: 361  NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG 420
            NP FDSQTKE +TL+  +FGSKC LSE+F+  V+ K GIVE +LSWA FK    L+K  G
Sbjct: 361  NPTFDSQTKEHMTLQVKNFGSKCTLSEKFVTGVS-KCGIVEAVLSWAKFKAQTQLQKQSG 419

Query: 421  TKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGK 480
             K   ++G+ KLEDAN AG RNS  CTLILTEGDSAK+LA++GL VVGRD++GVFPLRGK
Sbjct: 420  KKQSKLKGVPKLEDANDAGTRNSIDCTLILTEGDSAKSLAVSGLGVVGRDKYGVFPLRGK 479

Query: 481  LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLS 537
            LLNVREAS  Q+++N+EI NI KI+GL+   +Y    ++KSLRYG LMIMTDQ       
Sbjct: 480  LLNVREASHKQIMDNAEISNIVKIVGLQYKKKYETMEDLKSLRYGRLMIMTDQ------- 532

Query: 538  FLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA 597
                                 D DGSHIKGL+INFIH  WP+LLK+P FL EFITPIVKA
Sbjct: 533  ---------------------DQDGSHIKGLIINFIHHNWPTLLKLP-FLEEFITPIVKA 570

Query: 598  TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDF 657
            T K     SFYS+P++E WK++   N + + IKYYKGLGTSTSKE KEYFQN+  H+  F
Sbjct: 571  T-KGKDETSFYSLPEFEEWKDATR-NWNKYKIKYYKGLGTSTSKEAKEYFQNMKRHRILF 628

Query: 658  VWEDDQDGEAIELAFSKKKIEARKKWLLQF--------EPG---NHLDQKE-KYIKYSDF 705
             +ED  D E IE+AFSKK +++RK+WL  +        E G    +L +K  + + Y DF
Sbjct: 629  KYEDAGDDEHIEMAFSKKMVDSRKEWLTNWMVESKRRKEAGLAEEYLYEKNTRTVTYKDF 688

Query: 706  VNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYH 765
            VNKEL+LFS  D +RSI S+VDGLKPG RK+LF   KRN  +E KVAQ +G V+EHSAYH
Sbjct: 689  VNKELVLFSNMDNERSIASVVDGLKPGSRKVLFTCIKRNDKREIKVAQLAGSVAEHSAYH 748

Query: 766  HGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLF 825
            HGE SL STI+ +AQ++VGSNNINLLQP GQFGTR QGGKDAAS RYIFT LSP+TR +F
Sbjct: 749  HGEVSLMSTIVNLAQNYVGSNNINLLQPIGQFGTRLQGGKDAASPRYIFTMLSPLTRLIF 808

Query: 826  PKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRR 885
               DD LL YL +D Q+IEP WYMPIIP VLVNG+EGIGTGW + IPN+NPR++++N++R
Sbjct: 809  HPHDDPLLTYLRDDNQKIEPVWYMPIIPMVLVNGAEGIGTGWMTKIPNHNPREVISNIKR 868

Query: 886  LLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQD 945
            +L GE   PM PWY+ F G IEK + ++    +  +G +  +    + I ELP+  WTQ+
Sbjct: 869  MLRGEDPLPMKPWYKNFTGHIEKLSEQK----FISSGELGVIGHNRVEITELPVGVWTQN 924

Query: 946  YRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTT 1001
            Y+E  LE ++   +++ + I  +++Y+ DTT+ F + ++ E + + + EG+ K FKL  +
Sbjct: 925  YKESVLEPMLTDTEKSPAVITDYKEYNTDTTIKFVITMNPEKLQKAENEGIHKFFKLHAS 984

Query: 1002 ISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRF 1061
            I  ++M  FD   V+KKY+  +QIL EF+ +RL+FY KRK      L  E  KL N+ RF
Sbjct: 985  IGLTSMCAFDKDCVLKKYEATQQILREFYAVRLDFYGKRKAYLEGMLGAEAAKLTNQARF 1044

Query: 1062 ILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEVV 1120
            I+   +G++ + NRK+++++ EL ++G+   P K  K I+   +   DE +   E  E  
Sbjct: 1045 IVEKCDGDLRIENRKKSEMVKELVRRGYNSDPVKAWKLIQDRESVLLDEAQRIAEETEED 1104

Query: 1121 NGVQSID-----------YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESL 1169
                S             YDYLL M+   LTLEK   LL  +++   E+D L+K +P  L
Sbjct: 1105 ETAPSTSATSSKDDDNLDYDYLLGMSFWHLTLEKKNDLLRKKEEKCTELDILKKKSPADL 1164

Query: 1170 WVKDLDALDMQLDELDKSDARAEEERMKIKGNGNG 1204
            W +DLDAL ++LDE++      E+ER+   G+ +G
Sbjct: 1165 WTEDLDALSLKLDEVE------EKERLDELGDESG 1193


>gi|240280878|gb|EER44382.1| DNA topoisomerase 2 [Ajellomyces capsulatus H143]
          Length = 1737

 Score = 1179 bits (3051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1187 (51%), Positives = 793/1187 (66%), Gaps = 81/1187 (6%)

Query: 19   GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPG 78
            G T P K   E YQK +QLEHI+ RPDTYIGSIE+ T  +W+Y  +S +M  R +SYVPG
Sbjct: 127  GATVP-KENSEKYQKLTQLEHIIKRPDTYIGSIERSTNQMWVYNMQSGSMEFREVSYVPG 185

Query: 79   LYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
            LYKIFDEILVNAADNK  D  MD ++V +D+E   ISV N+G G+P+EIH +E VY+PEL
Sbjct: 186  LYKIFDEILVNAADNKHNDKNMDEIRVTLDRESGEISVWNNGRGIPIEIHAKEKVYIPEL 245

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            +FGHLL+SSNYDDN +K TGGRNGYGAKL NIFSTEF +ETAD K  KKYKQ +T+NM K
Sbjct: 246  VFGHLLSSSNYDDNQQKVTGGRNGYGAKLCNIFSTEFTLETADSKLKKKYKQTWTDNMSK 305

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
              +P I+ CK GD++TKV+F PD  KF M  ++DD  AL+K+RV DLAG     V V+LN
Sbjct: 306  MGKPKITDCK-GDDYTKVTFIPDFKKFGMDGIDDDFEALVKRRVYDLAGTC--KVTVKLN 362

Query: 259  GHRVPVKSFAEYVDMYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSF 305
            G R+P+++F +Y+ MY  ++ +               +  + RWEI   +S+G FQQVSF
Sbjct: 363  GSRIPIRNFKQYMQMYTNAIKKERGEEASKDKSEIITDNPDPRWEIGFAVSDGSFQQVSF 422

Query: 306  VNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAF 364
            VN IAT  GG+HV+ VA+Q+ N ++  V KKNK  A +K   ++NH++VFVNA I NPAF
Sbjct: 423  VNSIATTSGGSHVNSVADQICNKLVEAVKKKNKTGATLKPAQIRNHIFVFVNAQIVNPAF 482

Query: 365  DSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTE 424
             SQTKE LT + S FGSKC LS+EFLKK+  K+ ++E +L +A  K  + LKK DG +  
Sbjct: 483  TSQTKEQLTTKPSQFGSKCVLSDEFLKKIL-KTQVMENILHFAEKKADQILKKTDGNRRS 541

Query: 425  DVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNV 484
             +    KL DAN AG +    CTLILTEGDSAK LAMAG ++VG D FGVFPLRGKLLNV
Sbjct: 542  RMNN-PKLTDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAIVGPDLFGVFPLRGKLLNV 600

Query: 485  REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            R+AS +Q+  N+EI NIK  LGL+   EY + K LRYGHLMIMTDQ              
Sbjct: 601  RDASVDQISKNAEIQNIKNFLGLQHKKEYTDTKGLRYGHLMIMTDQ-------------- 646

Query: 545  IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV 604
                          DHDGSHIKGLLINF    +PSLLKIP FL+EFITPIVK    + K 
Sbjct: 647  --------------DHDGSHIKGLLINFFQVAFPSLLKIPQFLIEFITPIVKVWKGDPKN 692

Query: 605  LS----FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE 660
             +    F++M +Y+ W+E + G+   W  KYYKGLGTS++ + + YF+++  H K F   
Sbjct: 693  PTISKVFFTMQEYKTWQE-IHGHDKRWEKKYYKGLGTSSTDDAEIYFRDLDKHLKQFHVM 751

Query: 661  DDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQR 720
             D + E I+LAFSKKK + RK+WL QF+PG  LD     I Y+DF+NKELILFSMAD  R
Sbjct: 752  QDHEAELIDLAFSKKKADERKEWLRQFKPGTFLDHTTDEITYTDFINKELILFSMADNIR 811

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS++DGLKPGQRK+L+  FKRN  K+ KVA+ SGYV   +AY HGEQSL  TI+G+AQ
Sbjct: 812  SIPSVIDGLKPGQRKVLYTCFKRNVKKDVKVAELSGYVLGMTAYQHGEQSLQQTIIGLAQ 871

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNIN L+P+G FG+R QGG DAAS RYI+TRLSP  R +F + D+ LL Y  +DG
Sbjct: 872  NFVGSNNINCLEPSGNFGSRLQGGSDAASPRYIYTRLSPFARRIFHEADEPLLTYNVDDG 931

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q IEP  Y P++P +L+NG+EGIGTGWS+ IPNYNP +IVAN++RL+ GE + PM PW+R
Sbjct: 932  QVIEPEIYFPVVPMILINGAEGIGTGWSTSIPNYNPEEIVANLKRLMAGEPLVPMEPWFR 991

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQND 958
            GF G +        G  Y  +G I ++ +  + I ELPIR WTQD+++ LE II  ++  
Sbjct: 992  GFTGEVVSM----GGERYKFSGRISQIGDNEVEITELPIRSWTQDFKDRLEEIIKAEKVP 1047

Query: 959  SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKK 1018
            SFI+ ++ Y+  T V F + L E+   +   EGL +KFKLT TI+TSN+  FDS+G I K
Sbjct: 1048 SFIKDYKDYNTHTKVHFIIQLDEKYAKKAIAEGLEEKFKLTKTIATSNLVAFDSEGRITK 1107

Query: 1019 YDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRT 1078
            Y++ E+IL EFF +RL+ YEKRK+ QL  ++ +L K+ N+ RF+  +++G+ V++ + + 
Sbjct: 1108 YESVEEILREFFSVRLKLYEKRKQHQLSQMQKDLEKMTNQARFVQMIIDGKFVISKKPKA 1167

Query: 1079 DLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVV----------NGVQSIDY 1128
             L+ EL++KGF PF K S   +A   G         EN  VV            + +  Y
Sbjct: 1168 QLVRELKEKGFKPFAKVS---DAAAKG---------ENAPVVEEDEDDDGEDTEIAANSY 1215

Query: 1129 DYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            DYLL M + +LT E+V+ L         E+D L K + E +W  DLD
Sbjct: 1216 DYLLGMPLWSLTKERVEKLRRQIGDKETEIDTLIKLSKEDIWTADLD 1262


>gi|291405994|ref|XP_002719184.1| PREDICTED: DNA topoisomerase II, alpha isozyme-like [Oryctolagus
            cuniculus]
          Length = 1181

 Score = 1179 bits (3051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1192 (51%), Positives = 815/1192 (68%), Gaps = 76/1192 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SIERIYQKKTQLEHILLRPDTYIGSVELVTQHMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KSFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGS-TKDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKVDETGNPLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVAKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG RNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGSRNSAECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + +N + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-RNKQEMAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSS-TPNHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPKDDHTLRFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R+IV N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQNDS 959
             F GTIE+ A  +    Y + G +  +N TT+ I ELP+R WTQ Y+E  LE +++  + 
Sbjct: 894  NFKGTIEELAPNQ----YVINGEVAILNSTTIEISELPVRTWTQTYKEQVLEPMLNGTEK 949

Query: 960  ---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL++FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILKDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  +      +D  +E+E++  V +   +  ++Y
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDTEKETEKSDSVTDSGPT--FNY 1127

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
            LL M +  LT EK   L   R++  +E++ L++  P  LW +DL A   +L+
Sbjct: 1128 LLDMPLWYLTKEKKDELCRQRNEKEQELETLKRKGPSDLWKEDLAAFIEELE 1179


>gi|391864315|gb|EIT73611.1| DNA topoisomerase type II [Aspergillus oryzae 3.042]
          Length = 1730

 Score = 1179 bits (3050), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1188 (51%), Positives = 807/1188 (67%), Gaps = 70/1188 (5%)

Query: 12   SNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR 71
            +N A+  GP   N  + E YQK +QLEHI+ RPDTYIGSIE+ +Q +W+Y  ES  M  R
Sbjct: 112  TNEADA-GPKDSN--VSEKYQKLTQLEHIIKRPDTYIGSIERTSQQMWVYSTESDGMEFR 168

Query: 72   TISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEE 131
             +SYVPGLYKIFDEI+VNAADNKQ D  MD ++V I +E   ISV N+G G+P+E+H +E
Sbjct: 169  EVSYVPGLYKIFDEIVVNAADNKQNDANMDEIRVTISRETGEISVWNNGRGIPIEMHAKE 228

Query: 132  GVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQV 191
             +YVPELIFGHLLTSSNYDD  +K TGGRNG+GAKL N+FSTEF IET D ++ KKYKQ 
Sbjct: 229  KIYVPELIFGHLLTSSNYDDTQQKVTGGRNGFGAKLCNVFSTEFSIETQDSRQKKKYKQT 288

Query: 192  FTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGK 251
            +T+NM K  +  I+  K GD++TKV+FKPD AKF M  +++D  AL+K+RV DLAG    
Sbjct: 289  WTSNMTKMGKAKITDAK-GDDYTKVTFKPDYAKFGMDGMDNDFEALVKRRVYDLAGTA-- 345

Query: 252  SVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE---------------RWEICVTLS 296
             V V+LNG RVPV++F +Y++MY K++ R  ER ++               RWE+   +S
Sbjct: 346  KVAVKLNGSRVPVRNFKKYMEMYTKAIRR--ERGDDGPAAKDEIITCSPDPRWEVGFAVS 403

Query: 297  EGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFV 355
            +G FQQVSFVN IAT  GGTHV+Y+A+Q+ + +   V KKNKN A +K   ++NH+++FV
Sbjct: 404  DGSFQQVSFVNSIATTSGGTHVNYIADQICSKLADQVKKKNKNGATLKPAQIRNHIFIFV 463

Query: 356  NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
            NA I NPAF SQTKE LT + S FGSKC L E+F KK+  K+ ++  +L +A  K  + L
Sbjct: 464  NAQIVNPAFTSQTKEQLTTKSSQFGSKCVLEEDFYKKIL-KTDVMSNILHFAQQKADQML 522

Query: 416  KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVF 475
            KK DG +   +    KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVF
Sbjct: 523  KKTDGGRRARMNN-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVF 581

Query: 476  PLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAP 535
            PLRGKLLNVR+A+  Q+  N+EI NIK  LGL+   EY + + LRYGHLMIMTDQ     
Sbjct: 582  PLRGKLLNVRDATFEQISKNAEIQNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ----- 636

Query: 536  LSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIV 595
                                   DHDGSHIKGLLINF+ + +PSLL+IP FL+EFITPI+
Sbjct: 637  -----------------------DHDGSHIKGLLINFLQAQFPSLLRIPEFLIEFITPII 673

Query: 596  K---ATNKN-GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 651
            K      KN  K  SF++MP+YEAWKE    +   W  KYYKGLGTST+++ + YF+++ 
Sbjct: 674  KVWKGDPKNPTKQRSFFTMPEYEAWKEE-HKHERGWEHKYYKGLGTSTTEDAQVYFRDLD 732

Query: 652  LHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELI 711
             H K+F    D +   IELAFSKKK + RK+WL QF+PG  LD     I Y+DF+NKELI
Sbjct: 733  RHLKEFHTMQDNEVGLIELAFSKKKADERKEWLRQFKPGTFLDHSVSKISYTDFINKELI 792

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            LFSMAD  RSIPS+VDGLKPGQRK+L+  F+RN  K+ KV + +G+VS  +AY HG+ SL
Sbjct: 793  LFSMADNVRSIPSVVDGLKPGQRKVLYTCFRRNLKKDMKVVELAGHVSGMTAYQHGDISL 852

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
              TI+G+AQ FVGSNN+N L+P+G FG+R QGG D ASARYI+TRLSP  R +F   DD 
Sbjct: 853  QQTIVGLAQSFVGSNNVNCLEPSGNFGSRLQGGSDCASARYIYTRLSPFARRVFHAHDDP 912

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            LL Y  +DG++IEP  Y+P++P +LVNG++GIGTGWSS IPNYNP DIV N++RL++GE 
Sbjct: 913  LLTYNEDDGEKIEPEIYVPVVPMILVNGADGIGTGWSSSIPNYNPEDIVDNLKRLMDGEE 972

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLE 951
              PM PW+RGF G +        G  +  +GII+E  E  + I ELPIR WTQD+++ LE
Sbjct: 973  TRPMQPWFRGFTGEVTDV----GGDRFKFSGIIKETGEKEVEITELPIRTWTQDFKDKLE 1028

Query: 952  SII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHL 1009
             II  ++  SFI+ ++ Y+  T V F + L E++M     EGL +KFKL+ T++T+N+  
Sbjct: 1029 DIIKAEKTPSFIKDYKDYNTHTKVHFVIQLDEKNMKSALSEGLEEKFKLSKTVATTNLVA 1088

Query: 1010 FDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGE 1069
            FD +G I KY T + IL+EF+  RL+FYEKRK+ QL  L+ EL KL N+ RF+  +++G+
Sbjct: 1089 FDPEGRITKYATVDDILKEFYTYRLKFYEKRKQYQLSQLQKELDKLSNQARFVQEIIDGK 1148

Query: 1070 IVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNG--VQSID 1127
            +VV+ +K+  L+ EL+ KG+  FPK +   EAV AG  +   E +++        V S  
Sbjct: 1149 LVVSKKKKNVLVQELKDKGYKAFPKVA---EAVKAGEEERVVEEDDDESDSQDTEVLSSA 1205

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            YDYLL MAI +LT E+V+ L     +   EVD L K + E +W +DLD
Sbjct: 1206 YDYLLGMAIWSLTQERVEKLRRQIGEKEVEVDALIKMSKEDIWKRDLD 1253


>gi|47523094|ref|NP_999049.1| DNA topoisomerase 2-alpha [Sus scrofa]
 gi|6094498|sp|O46374.1|TOP2A_PIG RecName: Full=DNA topoisomerase 2-alpha; AltName: Full=DNA
            topoisomerase II, alpha isozyme
 gi|2668414|dbj|BAA23778.1| topoisomersae II [Sus scrofa]
          Length = 1533

 Score = 1179 bits (3049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1203 (51%), Positives = 820/1203 (68%), Gaps = 76/1203 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SIERIYQKKTQLEHILLRPDTYIGSVESVTQQMWVYDEDI-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD  KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDEEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFNGEDYTCITFHPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K         +   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDLYLKDKVDETGNPLKIIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVAKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQV 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPKDDHTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+R L++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRLLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  +      +D  +E++++  V +   +  ++Y
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKEADKSDSVADSGPT--FNY 1127

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R++  +E++ L++ +P  LW +DL A   +L+ ++  + +
Sbjct: 1128 LLDMPLWYLTKEKKDELCKLRNEKEQELETLKRKSPSDLWKEDLAAFIEELEAVEAKEKQ 1187

Query: 1191 AEE 1193
             E+
Sbjct: 1188 DEQ 1190


>gi|115390190|ref|XP_001212600.1| DNA topoisomerase 2 [Aspergillus terreus NIH2624]
 gi|114194996|gb|EAU36696.1| DNA topoisomerase 2 [Aspergillus terreus NIH2624]
          Length = 1732

 Score = 1179 bits (3049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 601/1171 (51%), Positives = 797/1171 (68%), Gaps = 64/1171 (5%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEI 86
            + E YQK +QLEHI+ RPDTY+GS E+ TQ +W+Y  ES+ M +R +SYVPGLYKIFDEI
Sbjct: 130  VSEKYQKLTQLEHIIKRPDTYVGSTERTTQHMWVYSSESEGMEYREVSYVPGLYKIFDEI 189

Query: 87   LVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
            +VNAADNKQ D  MD ++V ID+E   ISV N+G G+P+E+H +E +YVPELIFGHLLTS
Sbjct: 190  VVNAADNKQNDKNMDEIRVTIDRESGEISVWNNGRGIPIEMHSKEKMYVPELIFGHLLTS 249

Query: 147  SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            SNYDD   K TGGRNG+GAKL N+FSTEF IET D ++ KKYKQ +T NM K  +  I+ 
Sbjct: 250  SNYDDTQMKVTGGRNGFGAKLCNVFSTEFTIETQDSRQKKKYKQTWTENMTKMGKAKITD 309

Query: 207  CKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
             K G ++TKV+FKPD AKF MT ++DD  AL+K+RV DLAG     V V+LNG R+P+++
Sbjct: 310  AK-GADYTKVTFKPDYAKFGMTGMDDDFEALVKRRVYDLAGTA--KVAVKLNGSRIPIRN 366

Query: 267  FAEYVDMYPKSVTRFHER---------------VNERWEICVTLSEGQFQQVSFVNGIAT 311
            F  Y++MY K++ R  ER                + RWE+   +S+G FQQVSFVN IAT
Sbjct: 367  FKMYMEMYTKAIRR--ERGDMGPAGKNEIITCSPDPRWEVGFAVSDGAFQQVSFVNSIAT 424

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
              GGTHV+Y+A+Q+   +   V KKNKN A +K   ++NH+++FVNALI NPAF SQTKE
Sbjct: 425  TSGGTHVNYIADQICGKLAEQVKKKNKNGATLKPAQIRNHIFIFVNALIVNPAFTSQTKE 484

Query: 371  TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGIS 430
             LT +QS FGSKC L E+F KK+  K+ ++  +L +A  K  + LKK DG +   +    
Sbjct: 485  QLTTKQSQFGSKCVLEEDFYKKIL-KTEVMTNILHFAQQKADQMLKKTDGGRRSRMNN-P 542

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KL DAN AG +    CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +
Sbjct: 543  KLTDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASFD 602

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            Q+  N EI NIK  +GL+   EY + + LRYGHLMIMTDQ                    
Sbjct: 603  QIAKNQEIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ-------------------- 642

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---ATNKN-GKVLS 606
                    DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPIVK      KN  K  S
Sbjct: 643  --------DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIVKVWKGDPKNPTKQRS 694

Query: 607  FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
            F++MP+YEAWKE   G+   W  KYYKGLGTST+++ + YF+++  H K+F    D + E
Sbjct: 695  FFTMPEYEAWKEE-HGHERGWEHKYYKGLGTSTTEDAQIYFRDLDRHLKEFHTMQDNEVE 753

Query: 667  AIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
             IELAFSKKK + RK+WL QF PG  LD     I Y+DF+NKELILFSMAD  RSIPS+V
Sbjct: 754  LIELAFSKKKADERKEWLRQFRPGTFLDHSVDKITYTDFINKELILFSMADNIRSIPSVV 813

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DGLKPGQRK+L+  F+RN  K+ KV + +G+VS  +AY HGE SL  TI+G+AQ FVGSN
Sbjct: 814  DGLKPGQRKVLYTCFRRNLKKDMKVVELAGHVSGTTAYQHGEGSLQQTIVGLAQTFVGSN 873

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            N+N L+P+G FG+R QGG D ASARYI+TRLSP  R +F   DD LL Y  +DG +IEP 
Sbjct: 874  NVNCLEPSGNFGSRLQGGADCASARYIYTRLSPFARRVFHNHDDPLLTYNEDDGAKIEPE 933

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI 906
             Y+P++P +L+NG++GIGTGWSS IPNYNP DIV N++R+++GE ++PM PW+RGF G +
Sbjct: 934  VYVPVVPMILINGADGIGTGWSSSIPNYNPEDIVENLKRMMDGEPLKPMQPWFRGFTGEV 993

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGF 964
                       +  +GII+E  +  + I ELPIR WTQD+++ LE II  ++  SFI+ +
Sbjct: 994  TAVGQDR----FKFSGIIKETGDKEVEITELPIRTWTQDFKDKLEDIIKAEKTPSFIKDY 1049

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
            + Y+  T V F + + E+ M     EGL +KFKL+ T++T+N+  FD +G I KY + E 
Sbjct: 1050 KDYNTHTKVHFVIQMDEKHMKTAIAEGLEEKFKLSKTMTTTNLVAFDPEGRITKYASVED 1109

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            I++EF+ +RL++YE+RK+ QL  ++ EL KL N+ RF+  +++G++V++ +K+  L+ EL
Sbjct: 1110 IMKEFYAVRLKYYERRKQYQLNEMQKELDKLSNQARFVQMIIDGKLVISKKKKAVLVAEL 1169

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            ++K F PFPK  ++++A       E EE  E+      V S  YDYLL M I +LT E+V
Sbjct: 1170 KEKDFKPFPKVKEAVKAGETEPVVEEEEDSES--GDTEVLSNSYDYLLGMPIWSLTQERV 1227

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            + L         E+D L K + E +W +DL+
Sbjct: 1228 EKLRRQIGDKELEIDTLIKLSKEDIWKRDLE 1258


>gi|449491151|ref|XP_002193920.2| PREDICTED: DNA topoisomerase 2-alpha [Taeniopygia guttata]
          Length = 1541

 Score = 1177 bits (3046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1211 (51%), Positives = 820/1211 (67%), Gaps = 87/1211 (7%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            T+E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++E    +  R +++VPGLYKIFDE
Sbjct: 29   TVEHIYQKKTQLEHILLRPDTYIGSVELVTQQMWVFDE-GVGLNCRDVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E++ ISV N+G G+PV  H+ E VYVP +IFG LLT
Sbjct: 88   ILVNAADNKQRDKNMSCIKVTIDVENNTISVWNNGKGIPVVEHKVEKVYVPAMIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDDN KK TGGRNGYGAKL NIFST+F +ET   +  K +KQ +T+NMGK  E  + 
Sbjct: 148  SSNYDDNEKKVTGGRNGYGAKLCNIFSTKFTVETGCREYKKLFKQTWTDNMGKAGEMKL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +GD++T V+F+PDL+KF MT L+ D+VALM +R  D+AG   K VKV LNG R+PVK
Sbjct: 207  KYFDGDDYTCVTFQPDLSKFKMTVLDKDIVALMSRRAYDIAGST-KDVKVFLNGQRLPVK 265

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE VN RWE+C+TLSE  FQQVSFVN IAT KGG H
Sbjct: 266  GFRSYVDLYLKDKVDETGNALKVIHEEVNSRWEVCLTLSEKGFQQVSFVNSIATTKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNKN   VK   VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQLVTKLIDVVKKKNKNGVGVKPFQVKNHMWIFVNALIENPTFDSQTKENMTLQS 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             +FGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++G+ KL+DA
Sbjct: 386  KNFGSTCKLSEKFIKGAVG-CGIVESILNWVKFKAQNQLNKKCSAVKHSKIKGVPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG +NS  CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGSKNSLDCTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y +   +KSLRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDQESLKSLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+  +FL EFITPI+KA+ KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HNFLEEFITPIIKAS-KNKEEIAFYSIPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N +SW IKYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKASTQ-NYNSWKIKYYKGLGTSTSKEAKEYFADMAKHRIGFKYSGPEDDAAITLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHLDQKEK-YIKYSDFVNKELILFSMADLQR 720
            SKKKIE RK+WL  F            P  +L  K   Y+ Y+DF+NKEL+LFS +D +R
Sbjct: 654  SKKKIEERKEWLTNFMEDRRQRKLHGLPEEYLYGKNTDYLTYNDFINKELVLFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE +L  TI+ +AQ
Sbjct: 714  SIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEAALMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R +FP  DD +L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLVFPPMDDNILRFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WYMPIIP VLVNG+EGIGTGW+  IPN++ R++V N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYMPIIPMVLVNGAEGIGTGWACKIPNFDIREVVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y ++G +  ++ TT+ I ELP+R WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIDELGPNQ----YVISGEVSILDSTTIEITELPVRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +++Y  DTTV F V ++E+ +   +  GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYKEYHTDTTVRFVVKMTEDKLAEAEAVGLHKVFKLQTSLTCNSMVLFDHVGFL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYD+P+ IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  ++G+IV+ N+ 
Sbjct: 1010 KKYDSPQDILKEFFELRLRYYNLRKEWLIGMLGAESAKLSNQARFILEKIDGKIVIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P        +K  E      +D+   S   P         D++Y
Sbjct: 1070 KKELIQVLIQRGYESDPVKAWKEAQNKDEEEGEEEESDKESSSASGP---------DFNY 1120

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL+M +  LT EK   L   RD   +E++ L++ +P  LW +DL A    ++ELD  +A+
Sbjct: 1121 LLNMPLWYLTKEKKDELCKQRDNKEKELETLKRKSPSDLWKEDLAAF---IEELDVVEAK 1177

Query: 1191 -AEEERMKIKG 1200
             A++E   I G
Sbjct: 1178 QAQDESAGIVG 1188


>gi|449273806|gb|EMC83192.1| DNA topoisomerase 2-beta, partial [Columba livia]
          Length = 1611

 Score = 1177 bits (3045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1215 (51%), Positives = 820/1215 (67%), Gaps = 83/1215 (6%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T+   ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLY
Sbjct: 23   TSKKMSVERVYQKKTQLEHILLRPDTYIGSVEPLTQVMWVYDEDV-GMNCREVTFVPGLY 81

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADNKQRD  M  +K+ ID E ++IS+ N+G G+PV  H+ E VYVP LIF
Sbjct: 82   KIFDEILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIF 141

Query: 141  GHLLTSSNYDDNVKKTTG-GRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
            G LLTSSNYDD+ KK TG GRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K 
Sbjct: 142  GQLLTSSNYDDDEKKVTGSGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKT 201

Query: 200  SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
            SEP I K  +GD++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV LNG
Sbjct: 202  SEPKI-KHFDGDDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMLNG 259

Query: 260  HRVPVKSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
             ++PV  F  YVD+Y K        ++   HE VNERW++C+TLSE  FQQ+SFVN IAT
Sbjct: 260  KKLPVNGFRSYVDLYVKDKLDETGVALKVIHEVVNERWDVCLTLSEKGFQQISFVNSIAT 319

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNK-----------NANVKAHNVKNHLWVFVNALID 360
             KGG HVDYV +QV   ++ VV KKNK           N  +    VKNH+WVFVN LI+
Sbjct: 320  TKGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQAINWFLCFQQVKNHIWVFVNCLIE 379

Query: 361  NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKND 419
            NP+FDSQTKE +TL+  SFGSKC+LSE+F K   +  GI+E++L+W  FK    L KK  
Sbjct: 380  NPSFDSQTKENMTLQPKSFGSKCQLSEKFFK-AASNCGIIESILNWVKFKAQTQLNKKCS 438

Query: 420  GTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRG 479
              K   ++GI KL+DAN AGG++S  CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRG
Sbjct: 439  SVKHSKIKGIPKLDDANDAGGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRG 498

Query: 480  KLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPL 536
            K+LNVREAS  Q++ N+EI NI KI+GL+    Y +   +KSLRYG +MIMTDQ      
Sbjct: 499  KILNVREASHKQIMENAEINNIIKIVGLQYKKSYEDPESLKSLRYGKIMIMTDQ------ 552

Query: 537  SFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK 596
                                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVK
Sbjct: 553  ----------------------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVK 589

Query: 597  ATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKD 656
            A+ KN + LSFYS+P+++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  
Sbjct: 590  AS-KNKQELSFYSIPEFDEWKKHME-NHKAWKIKYYKGLGTSTAKEAKEYFADMERHRIL 647

Query: 657  FVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSD 704
            F +   +D  AI LAFSKKKI+ RK+WL  F            P   L     K++ Y+D
Sbjct: 648  FRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYND 707

Query: 705  FVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAY 764
            F+NKELILFS +D +RSIPS+VDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E SAY
Sbjct: 708  FINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAY 767

Query: 765  HHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFL 824
            HHGEQ+L  TI+ +AQ+FVGSNN+NLLQP GQFGTR  GGKDAAS RYIFT LSP+ R L
Sbjct: 768  HHGEQALMMTIVNLAQNFVGSNNVNLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARLL 827

Query: 825  FPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVR 884
            FP  DD LL +L +D Q++EP WY+PIIP VLVNG+EGIGTGW+  +PNY+ R+IV NVR
Sbjct: 828  FPSVDDNLLKFLYDDNQRVEPEWYIPIIPMVLVNGAEGIGTGWACKLPNYDTREIVNNVR 887

Query: 885  RLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQ 944
            R+L+G    PM P Y+ F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ
Sbjct: 888  RMLDGLDPHPMLPNYKNFKGTIQELGQNQ----YVVSGEIFVVDRNTVEITELPVRTWTQ 943

Query: 945  DYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTT 1000
             Y+E  LE ++   ++  + I  +++Y  DTTV F V ++EE + + +  GL K FKL T
Sbjct: 944  VYKEQVLEPMLNGTEKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQT 1003

Query: 1001 TISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVR 1060
            +++ ++M LFD  G +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ R
Sbjct: 1004 SLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLHYYSLRKEWLVGMLGAESTKLNNQAR 1063

Query: 1061 FILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEV 1119
            F+L  + G+I + NR + DL+  L Q+G+   P K  K  +   A   D    +++    
Sbjct: 1064 FVLEKIQGKITIENRSKRDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDPQNPNDDASSA 1123

Query: 1120 VNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
                   D++Y+L+M++ +LT EKV+ L+  RD    +++DL++ +   LW +DL A   
Sbjct: 1124 SGSTSGPDFNYILNMSLWSLTKEKVEELIKQRDSKERDLNDLKRKSSSDLWKEDLAAF-- 1181

Query: 1180 QLDELDKSDARAEEE 1194
             ++EL+K +A+  E+
Sbjct: 1182 -VEELEKVEAQERED 1195


>gi|220616|dbj|BAA02076.1| DNA topoisomerase II [Mus musculus]
          Length = 1528

 Score = 1177 bits (3044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 679/1534 (44%), Positives = 932/1534 (60%), Gaps = 140/1534 (9%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 28   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 86

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E+++IS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 87   ILVNAADNKQRDPKMSCIRVTIDPENNVISIWNNGKGIPVVEHKVEKIYVPALIFGQLLT 146

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA     K +KQ + +NMG+  +  + 
Sbjct: 147  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASRAYKKMFKQTWMDNMGRAGDMEL- 205

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+ +PVK
Sbjct: 206  KPFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNMLPVK 264

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 265  GFRSYVDLYLKDKVDETGNSLKVIHEQVNPRWEVCLTMSERGFQQISFVNSIATSKGGRH 324

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+ + ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 325  VDYVADQIVSKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 384

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 385  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQIQLNKKCSAVKHTKIKGIPKLDDA 443

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG RNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 444  NDAGSRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 503

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 504  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 541

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 542  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEIAFYSLPE 593

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 594  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYPGPEDDAAISLAF 652

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+++ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 653  SKKQVDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQSTSYLTYNDFINKELILFSNSDNER 712

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 713  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 772

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L +L +D 
Sbjct: 773  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPKDDHTLRFLYDDN 832

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY PI   VL+NG+EGIGTGWS  IPN++ R++V N+RRLL+GE   PM P Y+
Sbjct: 833  QRVEPEWYNPINTMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLLDGEEPLPMLPSYK 892

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ AS +    Y + G +  ++ TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 893  NFKGTIEELASNQ----YVINGEVAILDSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 948

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              S I  +R+Y  DTTV F + ++EE +   ++ GL K FKL ++++ ++M LFD  G +
Sbjct: 949  TPSLITDYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQSSLTCNSMVLFDHVGCL 1008

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+IV+ N+ 
Sbjct: 1009 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKP 1068

Query: 1077 RTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
            + +L+  L Q+G+   P K  K  +  V    +  E   E     +  ++   ++YLL M
Sbjct: 1069 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDTETSTSDSAAEAGPTFNYLLDM 1128

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
             +  LT EK   L   R++  +E++ L++ +P  LW +DL     +L+ ++  + + E+ 
Sbjct: 1129 PLWYLTKEKKDELCKQRNEKEQELNTLKQKSPSDLWKEDLAVFIEELEVVEAKEKQDEQV 1188

Query: 1195 RMKIKGNGN--------GDAGPKIVAKR------------APKNARKNDKKSNNARATEA 1234
             +  K             D  P    KR            A K  RK   KS N   T A
Sbjct: 1189 GLPGKAGKAKGKKAQMCADVLPSPRGKRVIPQVTVEMKAEAEKKIRKK-IKSENVEGTPA 1247

Query: 1235 --------------------MGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEE------DE 1268
                                 G     T   KP  + G KK P    + D        D 
Sbjct: 1248 EDGAEPGSLRQRIEKKQKKEPGAKKQTTLPFKPV-KKGRKKNPWSDSESDVSSNESNVDV 1306

Query: 1269 VPDLKQRLAKLNEQLASTKLEPSPDQSGVMETE-------------KVQVPAKKKEPSKR 1315
             P  K++ ++  +   +  L+   D SG+ E +             K ++P K  + + +
Sbjct: 1307 PPRQKEQRSRAAKAKFTVDLDSDEDFSGLDEKDEDEDFLPLDATPPKAKIPPKNTKKALK 1366

Query: 1316 TAAQKKVVTVETSDSEDEI-------IIDDDEAFEIAAPEEGKKGGRKAAGNSKAAKPAA 1368
            T      V    SD +D +         D     E + P +   G +K A  S+++   A
Sbjct: 1367 TQGSSMSVVDLESDVKDSVPASPGVPAADFPAETEQSKPSKKTVGVKKTATKSQSSVSTA 1426

Query: 1369 ETKKRGPAKKQQPEASLGQRLLTEMLKPAESSPEKKVRKMRASPFNKKSGSMLGRAGTIE 1428
             TKKR   K  + +++L  R ++E   PA++   +K +   +   +      + +  T +
Sbjct: 1427 GTKKRAAPKGTKSDSALSAR-VSEKPAPAKAKNSRKRKPSSSDSSDSDFERAISKGATSK 1485

Query: 1429 EPSGSSPSTSEEVAEVLPPKARPQRANRRQARYV 1462
            +  G       ++ + + P+A+  RA R+  +Y+
Sbjct: 1486 KAKGEEQDFPVDLEDTIAPRAKSDRA-RKPIKYL 1518


>gi|432882842|ref|XP_004074154.1| PREDICTED: DNA topoisomerase 2-beta-like [Oryzias latipes]
          Length = 1599

 Score = 1176 bits (3041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1211 (51%), Positives = 820/1211 (67%), Gaps = 94/1211 (7%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+ LEHILLRPDTY+GS+E  +Q +W+++E+   M  R I+YVPGLYKIFDE
Sbjct: 39   SVERVYQKKTPLEHILLRPDTYVGSVEPVSQPMWVFDEDV-GMNQREITYVPGLYKIFDE 97

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M A+K+ ID E + I++ N+G G+PV  H++E +YVP LIFGHLLT
Sbjct: 98   ILVNAADNKQRDKNMSAIKITIDPESNTITIWNNGKGIPVVEHKDEKMYVPALIFGHLLT 157

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD  KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SEP I 
Sbjct: 158  SSNYDDEEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYRHSFKQTWQNNMTKTSEPKI- 216

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            +  +GD++T V+F+PDLAKF M  L+ D VALM +R  D+AG C G  VKV LNG ++PV
Sbjct: 217  RFFDGDDFTCVTFQPDLAKFKMEKLDRDTVALMTRRAYDVAGSCRG--VKVTLNGKKLPV 274

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
              F  YVD+Y K         +   +E VN+RWE+C+T+SE  FQQ+SFVN IAT KGG 
Sbjct: 275  NGFRSYVDLYVKEKLDETGVPLKVVNEMVNDRWEVCLTMSEKGFQQISFVNSIATTKGGR 334

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            H+DYV +Q+   ++ VV KKNK    VK   VKNH+WVFVNALI+NP FDSQTKE +TL+
Sbjct: 335  HIDYVVDQIVAKIIEVVKKKNKAGVTVKPFQVKNHIWVFVNALIENPTFDSQTKENMTLQ 394

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC LSE+F++  T   GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 395  TKSFGSKCVLSEKFIRAAT-NCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDD 453

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREA+  Q++ 
Sbjct: 454  ANDAGGKHSSECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIME 513

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+    Y++   ++SLRYG +MIMTDQ                     
Sbjct: 514  NAEINNIIKIVGLQYKKSYDDPESLRSLRYGKIMIMTDQ--------------------- 552

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINF H  WPSLLK  +FL +FITPIVKAT KN + LSFYS+P
Sbjct: 553  -------DQDGSHIKGLLINFFHHNWPSLLK-HTFLEQFITPIVKAT-KNKQELSFYSLP 603

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            ++E WK+    N  SW +KYYKGLGTSTSKE KEYF ++  H+  F ++  +D  AI LA
Sbjct: 604  EFEEWKKQTD-NYKSWHVKYYKGLGTSTSKEAKEYFADMERHRITFRYQGAEDDAAITLA 662

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKK + RK+WL  F            P  +L   + K++ Y+DF+NKELILFS +D +
Sbjct: 663  FSKKKTDDRKEWLTNFMEDRRQRRMHGLPEKYLYGTQTKHLSYNDFINKELILFSNSDNE 722

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDGLKPGQRK+LF   KRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 723  RSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 782

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNIN+LQP GQFGTR  GGKDAAS RYIFT LSP+T+ LFP  D  LL +L +D
Sbjct: 783  QNFVGSNNINILQPLGQFGTRINGGKDAASPRYIFTMLSPLTKLLFPAVDSNLLKFLYDD 842

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VLVNG+EGIGTGW+  IPNY+PR+IV N+ R+LN +   PM P Y
Sbjct: 843  NQKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDPREIVNNINRMLNHQDPLPMLPSY 902

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F G I +    +    Y V+G +  +++ T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 903  KNFKGVIHELGQNQ----YLVSGEVSVLDKNTIEITELPVRTWTQAYKESVLEPMLQGTD 958

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  + I  +++Y  D+TV F V +SEE + + +  GL K FKL ++++ ++M LFD  G 
Sbjct: 959  KTPALINDYKEYHTDSTVKFVVRMSEEKLAQAEAVGLHKVFKLQSSLTCNSMVLFDHMGC 1018

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +K+YD+ + IL+EFF +RL + + RK   L +L  E  KL N+ RF+L  + G+I + N+
Sbjct: 1019 LKRYDSVQDILKEFFELRLHYCKLRKDWLLGSLGAEAAKLSNQARFVLEKIEGKISIENK 1078

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI--------- 1126
             + +L+  L QKG+   P         VA  +   E+++E  E  +G QS          
Sbjct: 1079 SKRELIRMLVQKGYESDP---------VAAWSKAQEKAQEEGE-TDGNQSDSSVDSGSSS 1128

Query: 1127 --DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL 1184
              +++Y+L+M +  LT EKV+ LL  RD    E+ DL+K + E LW +DL      ++EL
Sbjct: 1129 GPNFNYILNMPLWCLTKEKVEELLKQRDIKRGELADLQKKSSEDLWKEDLAVF---IEEL 1185

Query: 1185 DKSDARAEEER 1195
            D  +A+  EE+
Sbjct: 1186 DNVEAQEREEQ 1196


>gi|4218221|emb|CAA09762.1| DNA topoisomerase (ATP-hydrolysing) [Homo sapiens]
          Length = 1531

 Score = 1175 bits (3040), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1204 (51%), Positives = 821/1204 (68%), Gaps = 79/1204 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY D+ KK TGGRNGYGAKL NIFST+F ++TA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYHDDEKKVTGGRNGYGAKLCNIFSTKFTVQTASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V YVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VHYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R+IV N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELP+R WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPVRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL + F +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDLFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  +      +D  +E+E++  V +   +  ++Y
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTDSGPT--FNY 1127

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R++  +E+D L++ +P  LW +DL      ++EL+  +A+
Sbjct: 1128 LLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATF---IEELEAVEAK 1184

Query: 1191 AEEE 1194
             +++
Sbjct: 1185 EKQD 1188


>gi|348502160|ref|XP_003438637.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-alpha-like
            [Oreochromis niloticus]
          Length = 1578

 Score = 1174 bits (3038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1197 (51%), Positives = 809/1197 (67%), Gaps = 74/1197 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPD+YIGS+E  TQ +W+++E++  +  R +++VPGLYKIFDE
Sbjct: 25   SVERIYQKKTQLEHILLRPDSYIGSVEPVTQQMWVFDEDA-GLNCRDVTFVPGLYKIFDE 83

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E++ ISV N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 84   ILVNAADNKQRDKSMSCIKVNIDPENNTISVWNNGKGIPVVEHKVEKVYVPALIFGQLLT 143

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E +I 
Sbjct: 144  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKQSKKCFKQTWYDNMGRAGEASI- 202

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+ +T ++F+PDLAKF M+ L+ D VALM +R  D+AG   K V+V  N  ++PV 
Sbjct: 203  KPFDGEEYTCITFRPDLAKFKMSILDKDTVALMTRRAYDIAGAT-KGVRVFFNSKKLPVT 261

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +T  HE VNERWE+C+T+SE  FQQVSFVN IAT KGG H
Sbjct: 262  GFRSYVDMYVKDKVDELGGPLTVIHETVNERWEVCLTMSEKGFQQVSFVNSIATTKGGRH 321

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            +DYVA+QV + ++ VV KKNK    VK   VKNH+W+FVN LI+NP FDSQTKE +TL+Q
Sbjct: 322  IDYVADQVVSKLIEVVKKKNKAGVTVKPFQVKNHMWLFVNCLIENPTFDSQTKENMTLQQ 381

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC LSE+F+K+ T+  GIVE++++W  FK    L KK    K   ++G+ KL+DA
Sbjct: 382  KSFGSKCPLSEKFIKQATS-CGIVESIMNWVKFKAQTQLNKKCSAVKHTKIKGVPKLDDA 440

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG+NS  CTLILTEGDSAK LA++GL VVGRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 441  NDAGGKNSIGCTLILTEGDSAKTLAVSGLGVVGRDRYGVFPLRGKMLNVREASHKQIMEN 500

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KILGL+    Y++   +KSLRYG +MIMTDQ                      
Sbjct: 501  AEINNIIKILGLQYKKNYSDPESLKSLRYGKIMIMTDQ---------------------- 538

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL   +FL EFITPI+KA+ K  + LSFYS+P+
Sbjct: 539  ------DQDGSHIKGLLINFIHHNWPSLLH-HNFLEEFITPIIKASFKKTQ-LSFYSIPE 590

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            + AWKES   N  SW IKYYKGLGTSTS+E KEYF ++  H+  F +   +D EAI LAF
Sbjct: 591  FNAWKES-QQNHKSWKIKYYKGLGTSTSQEAKEYFSDMQRHRIPFKYSGPEDDEAITLAF 649

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKK+E RK+WL  F            P  +L  Q  K + Y+DFVNKEL+LFS +D +R
Sbjct: 650  SKKKVEERKEWLTNFMINRRQRREHNLPEEYLYGQSTKSLSYNDFVNKELVLFSNSDNER 709

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIP +VDGLKPGQRK+L+C FKRN  +E KVAQ +G V+E SAYHHGE SL  TI+G+AQ
Sbjct: 710  SIPCLVDGLKPGQRKVLYCCFKRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIIGLAQ 769

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R +FP  DD LL Y  +D 
Sbjct: 770  NFVGSNNMNLLQPLGQFGTRLHGGKDSASPRYIFTMLSPLARLVFPAVDDNLLKYNYDDN 829

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIPTVLVNG+EGIGTGW+S IPNY+ R+I++N+ R+L+GE   PM P Y+
Sbjct: 830  QRVEPEWYIPIIPTVLVNGAEGIGTGWASKIPNYDIREIISNINRMLDGEEPMPMLPNYK 889

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQNDS 959
             F GTIE+    +    Y  +G I  ++ TT+ I ELP++ WTQ Y+E  LE +++  + 
Sbjct: 890  DFRGTIEQVMDNQ----YLNSGEISILDSTTIEISELPVKTWTQTYKENVLEPMLNGTEK 945

Query: 960  ---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  ++ Y  DTTV F V ++EE +   +  GL K FKL + ++ ++M LFD  G +
Sbjct: 946  VPPLITDYKDYHTDTTVRFVVKMTEEKLREAEAAGLHKVFKLQSPLTCNSMVLFDHVGSL 1005

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY++ + IL +FF +R+++Y  RK      L  E  KL N+ RFIL  + G +V+ N+ 
Sbjct: 1006 KKYESVQDILRDFFELRMKYYVLRKDWLAGMLGAESAKLSNQARFILEKIQGTLVIENKP 1065

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAI 1136
            + +L+  L+Q G+   P  +           +E E      +   G    DY+YLLSM +
Sbjct: 1066 KKELIRMLQQMGYDSDPVKTWKQAQEKEMEEEEEEGEGGEKDDSTGP---DYNYLLSMPM 1122

Query: 1137 GTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEE 1193
              LT EK + L   RD    E++ L+K  P  LW +DL A     +EL + +A+ +E
Sbjct: 1123 WFLTKEKKEELCKQRDAKMTELNTLKKKNPADLWREDLAAFS---EELARVEAKEKE 1176


>gi|315047873|ref|XP_003173311.1| hypothetical protein MGYG_03483 [Arthroderma gypseum CBS 118893]
 gi|311341278|gb|EFR00481.1| hypothetical protein MGYG_03483 [Arthroderma gypseum CBS 118893]
          Length = 1672

 Score = 1174 bits (3038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 654/1438 (45%), Positives = 895/1438 (62%), Gaps = 92/1438 (6%)

Query: 9    LTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTM 68
            L +  N +    TA      + YQK +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M
Sbjct: 108  LASVENGSFTTETAEGGGSSDKYQKITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELM 167

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIH 128
             +R +S+VPGLYKIFDEILVNAADNKQ DP M  ++V +D+E   ISV N+G G+PVEIH
Sbjct: 168  EYREVSFVPGLYKIFDEILVNAADNKQNDPSMSEIRVTLDKEAGEISVWNNGRGIPVEIH 227

Query: 129  QEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKY 188
            ++E +Y+PELIFGHLLTSSNY+D  +K TGGRNGYGAKL NIFS EF +ETAD    KK+
Sbjct: 228  KKEHIYIPELIFGHLLTSSNYNDMQEKVTGGRNGYGAKLCNIFSNEFTVETADSSNKKKF 287

Query: 189  KQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGC 248
            K  +T NM    +  I++ K GD++TKV+FKPD AKF M  ++DD  AL+K+RV D+AG 
Sbjct: 288  KLTWTKNMSTMGKAKITESK-GDDYTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGT 346

Query: 249  LGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR-------------FHERVNERWEICVTL 295
             G +VK  LNG R+PVKSF +Y++MY K++                 E  + RWEI  T+
Sbjct: 347  CGTTVK--LNGTRIPVKSFKKYMEMYTKAIKTERGEDPTSDKNDIITESPDRRWEIGFTV 404

Query: 296  SEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVF 354
            S+G FQQVSFVN IAT  GGTHV+Y+++Q+ N +   + KKNK  A +KA  +KNH+++F
Sbjct: 405  SDGSFQQVSFVNSIATTSGGTHVNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFLF 464

Query: 355  VNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKD 414
            VN+ I NPAF SQTKE LT R S FGSKC +S++FLKKV  K+ +++ +L +A  K  + 
Sbjct: 465  VNSQIVNPAFTSQTKEQLTTRSSQFGSKCIVSDDFLKKVM-KTRVMDDILHFAEKKADQI 523

Query: 415  LKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGV 474
            LKK DG +   +    KL DAN AG +    CTLILTEGDSAK LAMAG +VVG D FGV
Sbjct: 524  LKKTDGNRRSRMNN-PKLTDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGV 582

Query: 475  FPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLA 534
            FPLRGKLLNVR+AS +Q+  N+EI NIK  +GL+   EY + + LRYGHLMIMTDQ    
Sbjct: 583  FPLRGKLLNVRDASVDQISKNAEIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ---- 638

Query: 535  PLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPI 594
                                    DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPI
Sbjct: 639  ------------------------DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPI 674

Query: 595  VKATNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNI 650
            VK    + K      SF+++P+YE WKE+   +   W  KYYKGLGTS++++ + YFQ++
Sbjct: 675  VKVWKGDPKNPTHSKSFFTLPEYEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQVYFQDL 733

Query: 651  TLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKEL 710
              H K F    D++ E IELAFSKKK + RK+WL QF+PG +LD     I Y+DF+NKEL
Sbjct: 734  DRHLKQFHTLQDKEAELIELAFSKKKADERKEWLRQFKPGTYLDHSMDQITYTDFINKEL 793

Query: 711  ILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQS 770
            ILFSMAD  RSIPS+VDGLKPGQRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ S
Sbjct: 794  ILFSMADNIRSIPSVVDGLKPGQRKVLYTMFKRNVKKDIKVVELAGYVSGMTAYQHGDNS 853

Query: 771  LASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDD 830
            L +TI+G+AQ FVGSNNIN L+P+G FG+R QGG D+ASARYI+TRLSP  R LF + D+
Sbjct: 854  LHTTIVGLAQTFVGSNNINCLEPSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADE 913

Query: 831  KLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE 890
             LL    +DG+ IEP  Y+P++P +L+NG++GIGTGWS+ IPNYNP D+V N++RL+ G+
Sbjct: 914  PLLANNVDDGKVIEPETYVPVVPLILINGADGIGTGWSTSIPNYNPEDVVDNLKRLMAGD 973

Query: 891  MMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFL 950
             + PM PW+RGF G  E T S   G  Y  +GII++  +  + I ELPIR WTQD+++ L
Sbjct: 974  ELVPMKPWFRGFKG--EVTGS---GDRYKFSGIIKQTGDNEVEISELPIRTWTQDFKDKL 1028

Query: 951  ESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMH 1008
            E II  ++  SFI+ ++ Y+  T V F + + E+ M +  +EGL +KFKL   I+TSNM 
Sbjct: 1029 EEIIKAEKVPSFIKDYKDYNTHTNVHFIIQMEEKHMKKAVEEGLEEKFKLVKPIATSNMV 1088

Query: 1009 LFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNG 1068
             FD++G I +Y+TPE IL  F+ +R++ YEKRK+  L  L+ +L KL N+ RF+  +++G
Sbjct: 1089 AFDAEGRITRYETPEDILRAFYAVRIKLYEKRKQHLLSELQTQLDKLSNQARFVQMIIDG 1148

Query: 1069 EIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDY 1128
            ++V++ +K+  L+ EL++KGF PFPK   + E     A D  +E +E       + S  Y
Sbjct: 1149 KLVISKKKKALLIQELQEKGFKPFPKVVDTPEP--GEAGDVEDEEDEEETATAALSSDAY 1206

Query: 1129 DYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDEL 1184
            DYLLSM + +LT E+V+ L         EVD L K T E LW KDL+        QL++ 
Sbjct: 1207 DYLLSMPLWSLTQERVEKLRRQIGDKEMEVDALIKLTKEDLWKKDLEEFITEWRFQLED- 1265

Query: 1185 DKSDARAEEERMKIKGNGNG-----DAGPKIVAKRAPKNARKND--------KKSNNARA 1231
                   E  R KI G G         G +  A +  K    +D        KK+   R 
Sbjct: 1266 ------EENRRKKIAGRGRRLSSKVKTGSRATAAKKRKAGSGDDSDFDVPKGKKATVNRV 1319

Query: 1232 TEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPS 1291
                G +D + K  KPK +       A+  DD E++ +P  K R A         K +P 
Sbjct: 1320 QPKGGLLDYLGK-SKPKPKTTSHVDGADDSDDFEDEVMPKPKSRGA-----AKEAKTKPV 1373

Query: 1292 PDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIAAPEEGK 1351
            P    + + + + + +   E  K  +  +K+ + +  DS+ E++    +    A  +  K
Sbjct: 1374 PVVKDLSDADFMDIDSMGTEKPKEASPIEKLKSAD-DDSDIEVVPKPTQRSARAKQQPKK 1432

Query: 1352 KGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKPAESSPEKKVRKMR 1409
              G   + + +          +G  KK+    S G  L +E  +P   S +   +  R
Sbjct: 1433 YHGFSTSEDEEDDDFDVSAMVKGIDKKKPNTVSTGPTLFSEPSRPPGGSAKLTAKPTR 1490


>gi|297701283|ref|XP_002827646.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-alpha [Pongo
            abelii]
          Length = 1532

 Score = 1174 bits (3037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1184 (51%), Positives = 811/1184 (68%), Gaps = 77/1184 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG RNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGSRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKIL-GLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            +EI NI KI+ GL+    Y   +++K+LRYG +MIMTDQ                     
Sbjct: 505  AEINNIIKIIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ--------------------- 543

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P
Sbjct: 544  -------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLP 594

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            ++E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LA
Sbjct: 595  EFEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLA 653

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +
Sbjct: 654  FSKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNE 713

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +A
Sbjct: 714  RSIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLA 773

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D
Sbjct: 774  QNFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDD 833

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R+IV N+RRL++GE   PM P Y
Sbjct: 834  NQRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMLPSY 893

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTIE+ A  +    Y ++G +  +N TT+ I ELPIR WTQ Y+E  LE ++   +
Sbjct: 894  KNFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTE 949

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +    I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G 
Sbjct: 950  KTPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGC 1009

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+
Sbjct: 1010 LKKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENK 1069

Query: 1076 KRTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYD 1129
             + +L+  L Q+G+   P         K  +      +D  +E+E++  V +   +  ++
Sbjct: 1070 PKKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTDSGPT--FN 1127

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKD 1173
            YLL M +  LT EK   L   R++  +E+D L++ +P  LW +D
Sbjct: 1128 YLLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKED 1171


>gi|170047758|ref|XP_001851377.1| DNA topoisomerase 2 [Culex quinquefasciatus]
 gi|167870064|gb|EDS33447.1| DNA topoisomerase 2 [Culex quinquefasciatus]
          Length = 1358

 Score = 1174 bits (3036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1237 (49%), Positives = 820/1237 (66%), Gaps = 96/1237 (7%)

Query: 12   SNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR 71
            S       P    K+IE++YQKKSQLEHILLRPDTYIGS+E+  +  WIY+ E+  MI +
Sbjct: 30   SGAGATASPKVGGKSIEKIYQKKSQLEHILLRPDTYIGSVEQLKETQWIYDTEANKMIQK 89

Query: 72   TISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEE 131
             I++VPGLYKIFDEILVNAADNKQRD KM A+K+ I+QE + IS+ N+G G+PV +H+EE
Sbjct: 90   EITFVPGLYKIFDEILVNAADNKQRDAKMTAIKIDINQETNTISIWNNGQGIPVVMHKEE 149

Query: 132  GVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQV 191
             +YVP +IFGHLLTSSNY+D  +K TGGRNGYGAKL NIFST+F +ETA  +  K +KQ 
Sbjct: 150  KMYVPTMIFGHLLTSSNYNDEEQKVTGGRNGYGAKLCNIFSTKFTVETASKQYKKAFKQT 209

Query: 192  FTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGK 251
            + +NM K SEP I +   G+++TK++F PDL KF M  L+DD+V LM +R  D+A    +
Sbjct: 210  WGDNMSKASEPKIKEGASGEDYTKITFSPDLTKFKMEKLDDDIVGLMSRRAFDVAAST-R 268

Query: 252  SVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQV 303
             V V LNG ++P+K+F +Y+D+Y K         +   +E  NERWE+ V +SE  FQQV
Sbjct: 269  GVAVYLNGKKLPIKNFKDYIDLYVKEQQEDVSAPIKVCYENANERWEVAVAISEKGFQQV 328

Query: 304  SFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNP 362
            SFVN IAT KGG HVDYV + +   ++ V+ KKNK   N+K   VKNH+WVF+N LI NP
Sbjct: 329  SFVNSIATTKGGRHVDYVTDMIVKQLIEVLKKKNKGGINIKPFQVKNHMWVFINCLIVNP 388

Query: 363  AFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
             FDSQTKE +TL+  SFGSKC LSE+F+  V+ KSGIVE++L WA FK   +L K  G+K
Sbjct: 389  TFDSQTKENMTLQAKSFGSKCALSEKFITAVS-KSGIVESVLQWAKFKAQTELNKASGSK 447

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
               ++G+ KLEDAN AG +NS  CTLILTEGDSAK LA++GL VVGRD +GVFPLRGKLL
Sbjct: 448  KSKIKGVPKLEDANDAGTKNSLNCTLILTEGDSAKTLAVSGLGVVGRDTYGVFPLRGKLL 507

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFL 539
            NVREA+  Q+L N+EI N+ KILGL+   +Y   +++K+LRYG +MIMTDQ         
Sbjct: 508  NVREATHKQILENAEINNLIKILGLQYKKKYLTIDDLKTLRYGKVMIMTDQ--------- 558

Query: 540  LWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATN 599
                               D DGSHIKGLLINFIH+ WP LL++P FL EFITPIVKAT 
Sbjct: 559  -------------------DQDGSHIKGLLINFIHTNWPELLRLP-FLEEFITPIVKATK 598

Query: 600  KNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
            KNG+ LSF+S+P++E WK     N+ +++IKYYKGLGTSTSKE KEYFQN+  H+  F +
Sbjct: 599  KNGEELSFFSLPEFEEWKTETA-NSHTYNIKYYKGLGTSTSKEAKEYFQNMERHRILFTY 657

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLL-QFEPGNH---LDQKEKY--------IKYSDFVN 707
            +   D +AI +AF+KK ++ RK+WL    E   H   +   E+Y        I Y +F+N
Sbjct: 658  DTSTDDDAITMAFAKKCVDQRKEWLTAHMEENRHRKLVGLPERYLYTKTTRAISYKEFIN 717

Query: 708  KELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHG 767
             EL+LFS +D  RSIP ++DGLKPGQRK++F  FKRN  +E KVAQ +G V+E SAYHHG
Sbjct: 718  LELVLFSNSDNVRSIPCVLDGLKPGQRKVMFTCFKRNDKREVKVAQLAGSVAEMSAYHHG 777

Query: 768  EQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPK 827
            EQSL STI+ +AQ+FVGSNNINLL P GQFGTR  GGKD+AS RYIFT +S +TR +F  
Sbjct: 778  EQSLCSTIVNLAQNFVGSNNINLLYPGGQFGTRLAGGKDSASPRYIFTMMSALTRLIFHP 837

Query: 828  DDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL 887
             DD LL+Y  +D Q+IEP WY+PIIP VLVNGSEGIGTGWS+ IP +NPRDI+AN+RR+L
Sbjct: 838  LDDPLLEYQYDDNQKIEPLWYLPIIPMVLVNGSEGIGTGWSTKIPLHNPRDIIANLRRML 897

Query: 888  NGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYR 947
            NGE  + +HPWY+ F G++E    ++    Y   G +  +    + I ELPI  WTQ Y+
Sbjct: 898  NGEEPKVLHPWYKNFRGSVEVVGPQK----YLTVGNLSLLENQKIEISELPIGTWTQVYK 953

Query: 948  E-FLESII---DQNDSFIRGFRQYSDDTTVDFEV-FLSEE-SMMRTKQEGLLKKFKLTTT 1001
            E  LE ++   ++  + I  +++Y+ DTTV F V FL  E   +  +  G  + FKLT++
Sbjct: 954  ENTLEPLLHGSEKQKAVISDYKEYNTDTTVRFVVSFLPGEFDKLYAEDGGFHRVFKLTSS 1013

Query: 1002 ISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRF 1061
            IST+ MH FD K  +++Y+    I +E++ IRL+FY KRK      L+ E  +L ++ RF
Sbjct: 1014 ISTTCMHAFDDKNYLRRYEHANDIFQEYYKIRLDFYHKRKAYLEGMLQAEADRLTDQARF 1073

Query: 1062 ILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-KNSKSIEAVVA---------------- 1104
            I+   +  +VV N+KR  ++ EL ++G+ P P K  K   A+                  
Sbjct: 1074 IMEKCDRTLVVENKKRKVMIDELIKRGYRPDPVKEWKRKVALEEDEEAEEPEEEGAEEED 1133

Query: 1105 -----GATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVD 1159
                  A  +  + E+  + +  V+   +DYLL M++  LT E+   LL  RD    E+ 
Sbjct: 1134 TKPGKSAAKKPVDPEKAFQRLTDVKK--FDYLLGMSMWMLTDERKNELLKQRDNKLSELS 1191

Query: 1160 DLRKATPESLWVKDLDALDMQLDELDKSDARAEEERM 1196
             ++  T E LW  DLDAL  +LDE++      E+ER+
Sbjct: 1192 AIKAKTSEVLWTDDLDALAKKLDEVE------EKERL 1222


>gi|384493528|gb|EIE84019.1| hypothetical protein RO3G_08724 [Rhizopus delemar RA 99-880]
          Length = 1330

 Score = 1174 bits (3036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 597/1193 (50%), Positives = 811/1193 (67%), Gaps = 74/1193 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE+YQKK+QLEHILLRPDTY+GSIE   Q +W+++ E   +  + I YVPGLYKI D
Sbjct: 160  KTIEEIYQKKTQLEHILLRPDTYVGSIEAEEQEMWVFDNEESIIKKKKIKYVPGLYKIVD 219

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP M  +KV ID+  + IS+ N+G G+P+  H++E VYVPELIFGHLL
Sbjct: 220  EILVNAADNKIRDPSMSYIKVKIDRAENFISIENNGSGIPITEHKKEKVYVPELIFGHLL 279

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ KK TGGRNGYGAKL NIFSTEFI+ETAD +R  KYKQVF NNM  K  P+I
Sbjct: 280  TSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFIVETADKERQLKYKQVFQNNMTVKKAPSI 339

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +K   G+ +T++SFKPDL+KF+MT L++D  AL+KKRV D+AGC+ + V V LNG ++PV
Sbjct: 340  TKNSRGEQYTRISFKPDLSKFSMTELDEDFEALIKKRVYDMAGCM-EGVNVFLNGTKIPV 398

Query: 265  KSFAEYVDMYPKSVTR---------FHE-RVNERWEICVTLSEGQFQQVSFVNGIATIKG 314
            K F +Y ++Y KS+            H+   NERW++C  +S+GQF Q+SFVN I T KG
Sbjct: 399  KGFKQYCELYTKSMEFRALEGKKLILHDGATNERWQVCFAVSDGQFNQISFVNSICTAKG 458

Query: 315  GTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            GTHV++VA+Q+   ++    KK+ N N+K   +KNH+ +FVN LI+NPAFDSQTKE +TL
Sbjct: 459  GTHVNHVADQIVKALLPDAQKKSGNKNIKPFQIKNHMTLFVNCLIENPAFDSQTKENMTL 518

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED 434
            R  SFGS  +L+++F+  + +KSGI++ ++ W  F++ + + K D  K      I KLED
Sbjct: 519  RVGSFGSSYKLNDKFVSAI-SKSGIIDNIVRWVKFREEEQMTKADSGKMAKNLKIPKLED 577

Query: 435  ANLAGGR-NSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            AN AG R  + +CTLI+TEGDSAKAL ++GLSVV RD +GVFP+RGKLLNVR+AS+ +++
Sbjct: 578  ANFAGVRPKNSKCTLIITEGDSAKALVLSGLSVVKRDYWGVFPIRGKLLNVRDASNAEIM 637

Query: 494  NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
             N EI +IK ILGL+ G +Y +V  LRYG LMIMTDQ                       
Sbjct: 638  KNEEIKSIKAILGLQHGKKYTSVDELRYGRLMIMTDQ----------------------- 674

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSMPD 612
                 DHDGSHIKGLLINFI + +PSLL IP FL+EFITPI+K T+K  K V+SF+++P+
Sbjct: 675  -----DHDGSHIKGLLINFIDTMFPSLLDIPGFLLEFITPIIKCTHKRTKEVISFFTIPE 729

Query: 613  YEAWKESLGGNA-SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            YE+W  +L  N  S W  KY+KGLGTS     +EYF N+ +H+K+F   D +D + I++A
Sbjct: 730  YESW--ALEHNKKSEWEPKYFKGLGTSDKTAAREYFSNLPVHQKEFQTMDTEDRQLIDMA 787

Query: 672  FSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKP 731
            F+KKK   RK+WL+Q+EPG ++D     IK SDFVN+EL+LFSMAD  RSIPSMVDG KP
Sbjct: 788  FNKKKASDRKEWLVQYEPGIYIDHSVNKIKISDFVNRELLLFSMADNIRSIPSMVDGFKP 847

Query: 732  GQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLL 791
             QRK+L+   KRN   E KVAQ + YV+  + YHHGE S+ASTI+ MAQ+FVGSNNIN+L
Sbjct: 848  AQRKVLYGCIKRNKNTEVKVAQLANYVAGVTQYHHGEASVASTIINMAQEFVGSNNINVL 907

Query: 792  QPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPI 851
             P+GQFG+R++G K AAS RY+FTRL+ I R +F  +DD LL+YL E+   IEP+WYMPI
Sbjct: 908  VPSGQFGSRHEGSKSAASPRYLFTRLTKIARIIFHPNDDALLNYLVEENTLIEPSWYMPI 967

Query: 852  IPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTAS 911
            IP VLVNG++GIGTGWS+ IPNYNP+DI+ N+ RL+NGE +  M PWYRGF G I     
Sbjct: 968  IPMVLVNGADGIGTGWSTAIPNYNPKDIIENIFRLMNGEEIVTMKPWYRGFKGEINPVGP 1027

Query: 912  KEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS----------FI 961
             +    YTV GI +  +E  +++ ELP+R WT  ++++L    D ND            I
Sbjct: 1028 SK----YTVNGIADITDEGDIKVTELPVRMWTDTFKKYLN---DMNDPPKDRKSTTPINI 1080

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDT 1021
              F+  S D  V+F + L E ++ + +  G+L   K+T++I+T+N+  FD  G I+KY  
Sbjct: 1081 TSFKNNSTDVAVNFTISLDEANLKKAEDMGVLNALKITSSINTTNIVCFDKDGKIRKYSG 1140

Query: 1022 PEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLL 1081
            PE+IL+EF+ +RLE+Y KRK+  +  L+ E  +L+NK +FI  V+  ++   NR   DL+
Sbjct: 1141 PEEILKEFYELRLEYYIKRKEHLIYVLKDEYDRLDNKAKFIDLVIEKKLNHINRNEDDLI 1200

Query: 1082 LELRQKGFTP-FPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLT 1140
             ++++ G    +P   K+   V     DE   +E+        +   Y+YL S+ +   T
Sbjct: 1201 ADMKEFGLKQLYPLKKKNALVV---DDDENGSAEQ--------EGTGYEYLFSINVRGFT 1249

Query: 1141 LEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEE 1193
             EK+Q L   RDK  EE+ D++   P++ W +DL+AL  + + L + DA  E+
Sbjct: 1250 KEKIQDLYKQRDKKFEEMQDIQGTPPKTFWRRDLEALLKEWEALLEEDAEYEK 1302


>gi|449669861|ref|XP_002158728.2| PREDICTED: DNA topoisomerase 2-beta-like, partial [Hydra
            magnipapillata]
          Length = 1330

 Score = 1172 bits (3033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/1301 (48%), Positives = 861/1301 (66%), Gaps = 105/1301 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKKSQLEHI+LRPD+YIGS E   Q++W++++ES ++I + I++ PGLYKIFDE
Sbjct: 22   SVERIYQKKSQLEHIILRPDSYIGSTEPCQQSMWVWDDESSSIISKNITFSPGLYKIFDE 81

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            I+VNAADNKQRD KM+ +KV ID E ++ISV N+G G+PVE+H+E+ VYVP LIFGHLLT
Sbjct: 82   IIVNAADNKQRDVKMNTIKVNIDVEKNIISVWNNGRGIPVEMHKEQNVYVPTLIFGHLLT 141

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET-ADGKRLKKYKQVFTNNMGKKSEPNI 204
            SSNYDD  KK  GGRNG+GAKL NIFST+F IET  DGK   K+KQV+ NNM K +EP  
Sbjct: 142  SSNYDDTEKKVVGGRNGFGAKLCNIFSTKFSIETGCDGK---KFKQVWKNNMSK-AEPEH 197

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVP 263
                 G ++T V+F PDL KF M  L++D V+L+K+R  D+AG C G  V V LNG ++ 
Sbjct: 198  IVDYSGSDFTCVTFSPDLPKFKMDKLDNDFVSLLKRRAYDMAGVCRG--VSVYLNGEKLK 255

Query: 264  VKSFAEYVDMYPKSVTR-----------FHERVNERWEICVTLSEGQFQQVSFVNGIATI 312
            VKSF +YV +Y K+  +            HE VN RWEICVT+SE  FQ  SFVN IAT 
Sbjct: 256  VKSFKDYVGLYVKTACKTENGEEQGPKIIHEIVNPRWEICVTVSESGFQHSSFVNSIATT 315

Query: 313  KGGTHVDYVANQVANHVMAVVNKKNKNA--NVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
            KGGTHV Y+ +Q+ + ++A V KK      ++K  +VK+HLWVFVN LI+NP FDSQTKE
Sbjct: 316  KGGTHVTYIVDQLCDKLIATVKKKTGKGGFDIKPFHVKSHLWVFVNTLIENPTFDSQTKE 375

Query: 371  TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGI 429
             +TLR+S+FGS CELS++++K V   +G++E +LSW  FK    L KK   +K   ++G+
Sbjct: 376  NMTLRKSAFGSTCELSDKYIKMV-QDTGVLENILSWVKFKSEAQLNKKGSSSKHSRLKGV 434

Query: 430  SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS 489
             KLEDAN AG + S  CTLI+TEGDSAKAL MAGLSVVGRD++GVFPLRGKLLNVR+AS 
Sbjct: 435  PKLEDANDAGTKRSRDCTLIVTEGDSAKALVMAGLSVVGRDKYGVFPLRGKLLNVRDASH 494

Query: 490  NQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIF 546
            +Q++NN+EIG++ KI+GL+ G +Y   N++K+LRYGHLMIM DQ                
Sbjct: 495  SQIMNNAEIGSLVKIIGLQFGKKYENENDMKTLRYGHLMIMADQ---------------- 538

Query: 547  AWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS 606
                        D DGSHIKGL+INFIH+ WP LLKIP FL EFITPI+KA+    + +S
Sbjct: 539  ------------DQDGSHIKGLVINFIHANWPGLLKIP-FLEEFITPIIKASKSKKETIS 585

Query: 607  FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
            F+S+P++E WKE+   N  SW IKYYKGLG+STS EGKEYF ++  H+  F ++     E
Sbjct: 586  FFSIPEFEEWKEATP-NYKSWHIKYYKGLGSSTSIEGKEYFSDMQRHRIVFEYDGPSSDE 644

Query: 667  AIELAFSKKKIEARKKWL--------LQFEPG---NHLDQK-EKYIKYSDFVNKELILFS 714
            A+ LAFSKK    RK WL        L+ E G    +L +K  + + Y DF+NKELILFS
Sbjct: 645  ALILAFSKKCANERKNWLDNGLAERKLRREAGLPEVYLYEKGTRTVTYQDFINKELILFS 704

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
              D +RSIPS+VDG KPGQRK+LF   KRN  +E KVAQ +G V+E SAYHHGE SL  T
Sbjct: 705  NTDNERSIPSLVDGFKPGQRKVLFTCMKRNDKREVKVAQLAGSVAELSAYHHGEMSLMGT 764

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +AQ+FVGSNN+N+L P GQFGTR+ GGKD+AS RYIFT +S +TR +FP+ DD +L 
Sbjct: 765  IVNLAQNFVGSNNLNVLLPIGQFGTRHVGGKDSASPRYIFTMMSSLTRLVFPEKDDAVLT 824

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            YL +D Q+IEP WY PIIP  LVNG+EGIGTG+S+ IPN++ RDIV NV+R++NGE  +P
Sbjct: 825  YLFDDNQKIEPEWYCPIIPMCLVNGAEGIGTGYSTKIPNFDIRDIVENVKRMINGEEPQP 884

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII 954
            M P Y+ F G I     +E    +   G I  ++ETT+ I ELP+R WTQ Y+E +  + 
Sbjct: 885  MFPSYKDFTGEI----VQEGDQKFICQGTINIIDETTIEITELPVRTWTQAYKETVLDVY 940

Query: 955  ----DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
                +++   I  +++Y  D+TV F + ++ E M++ ++EGL KKFKL ++I+ S M LF
Sbjct: 941  LYGNEKSPPCITDYKEYHTDSTVKFVITMTPEQMVKAEEEGLHKKFKLLSSINLSCMVLF 1000

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D  G IKKY++P +I++ FF++R+  Y +RKK  L  LE E  KLEN+ RFIL  + G+I
Sbjct: 1001 DEFGCIKKYESPTEIMKAFFNVRMAKYNERKKFILGMLEAECSKLENQARFILEKIEGKI 1060

Query: 1071 VVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEE--SEENPEVVNGVQSIDY 1128
            ++ NR + D++  L ++G+   P  +   E   +G  ++  E  + +     + +   D+
Sbjct: 1061 IIENRSKRDVITTLVERGYVSDPVKAWKAEVDKSGHLEDDSEAPTTDVASSSSSLSGPDF 1120

Query: 1129 DYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL-------DMQL 1181
             YLLSMAI +L+ EK + LL  RD+  +E++ L++ TP  LW  DL+         + Q 
Sbjct: 1121 AYLLSMAIMSLSREKKEELLNQRDEKKKELNALKQKTPSDLWTDDLNKFCEELERVEEQE 1180

Query: 1182 DELDKS-DARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDN 1240
             EL+++ DA +       K N     G K  AK+ P  ++   K       T+ +   D 
Sbjct: 1181 KELNRAVDALSN------KSNSRSTKGNK--AKKVPVKSKDIAKAFEKKSDTKVLPVKDA 1232

Query: 1241 VTKVVKPKGRAGLKKAPAEKL---DDDEEDEVPDLKQRLAK 1278
             + V+K +        P+E+    D++++ E+  L  RL K
Sbjct: 1233 SSNVIKSE--------PSEQSQENDNEDKGEILSLADRLKK 1265


>gi|38259192|ref|NP_071519.2| DNA topoisomerase 2-alpha [Rattus norvegicus]
 gi|57964|emb|CAA79611.1| DNA topoisomerase II [Rattus norvegicus]
          Length = 1526

 Score = 1172 bits (3031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1203 (51%), Positives = 817/1203 (67%), Gaps = 78/1203 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 28   SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 86

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V +   ++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 87   ILVNAADNKQRDPKMSCIRVTM-MRNNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 145

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  +  + 
Sbjct: 146  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGDMEL- 204

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+R+PVK
Sbjct: 205  KPFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNRLPVK 263

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        ++   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 264  GFRSYVDMYLKDKVDETGNALKVVHEQVNPRWEVCLTMSEKGFQQISFVNSIATSKGGRH 323

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+ + ++ VV KKNK    VKA  VKNH+W+F NA+I+NP FDSQTKE +TL+ 
Sbjct: 324  VDYVADQIVSKLVDVVKKKNKGGVAVKADQVKNHMWIFGNAVIENPTFDSQTKENMTLQA 383

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 384  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQIQLNKKCSAVKHNRIKGIPKLDDA 442

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG RNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 443  NDAGSRNSAECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 502

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 503  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 540

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 541  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEIAFYSLPE 592

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF N+  H+  F +   +D  AI LAF
Sbjct: 593  FEEWK-STNPNHKKWKVKYYKGLGTSTSKEAKEYFANMKRHRIQFKYSGPEDDAAISLAF 651

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+++ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 652  SKKQVDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTMYLTYNDFINKELILFSNSDNER 711

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 712  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 771

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L +L +D 
Sbjct: 772  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPSKDDHTLRFLYDDN 831

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRLL+GE   PM P Y+
Sbjct: 832  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLLDGEEPLPMLPSYK 891

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             + GTIE+ AS +    Y + G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 892  NYKGTIEELASNQ----YVINGEVAILNSTTIEITELPIRTWTQTYKEQVLEPMLNGTEK 947

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F + ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 948  TPPLITDYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1007

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+IV+ N+ 
Sbjct: 1008 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKP 1067

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  E       +E+E    +P   +G     ++Y
Sbjct: 1068 KKELIKVLIQRGYDSDPVKAWKEAQQKVPEEEENEENEESESESTSPAAESGPT---FNY 1124

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   RD+  +E++ L+K TP  LW +DL A   +L+ ++  + +
Sbjct: 1125 LLDMPLWYLTKEKKDELCKQRDEKEQELNTLKKKTPSDLWKEDLAAFVEELEVVEAKEKQ 1184

Query: 1191 AEE 1193
             E+
Sbjct: 1185 DEQ 1187


>gi|1174742|sp|P41516.1|TOP2A_RAT RecName: Full=DNA topoisomerase 2-alpha; AltName: Full=DNA
            topoisomerase II, alpha isozyme
 gi|587515|emb|CAA86496.1| DNA topoisomerase II [Rattus norvegicus]
          Length = 1526

 Score = 1171 bits (3030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1203 (51%), Positives = 817/1203 (67%), Gaps = 78/1203 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 28   SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 86

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V +   ++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 87   ILVNAADNKQRDPKMSCIRVTM-MRNNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 145

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  +  + 
Sbjct: 146  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGDMEL- 204

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+R+PVK
Sbjct: 205  KPFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNRLPVK 263

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        ++   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 264  GFRSYVDMYLKDKVDETGNALKVVHEQVNPRWEVCLTMSEKGFQQISFVNSIATSKGGRH 323

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+ + ++ VV KKNK    VKA  VKNH+W+F NA+I+NP FDSQTKE +TL+ 
Sbjct: 324  VDYVADQIVSKLVDVVKKKNKGGVAVKADQVKNHMWIFGNAVIENPTFDSQTKENMTLQA 383

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 384  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQIQLNKKCSAVKHNRIKGIPKLDDA 442

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG RNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 443  NDAGSRNSAECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 502

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 503  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 540

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 541  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEIAFYSLPE 592

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF N+  H+  F +   +D  AI LAF
Sbjct: 593  FEEWK-STNPNHKKWKVKYYKGLGTSTSKEAKEYFANMKRHRIQFKYSGPEDDAAISLAF 651

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+++ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 652  SKKQVDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTMYLTYNDFINKELILFSNSDNER 711

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 712  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 771

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L +L +D 
Sbjct: 772  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPSKDDHTLRFLYDDN 831

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRLL+GE   PM P Y+
Sbjct: 832  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLLDGEEPLPMLPSYK 891

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             + GTIE+ AS +    Y + G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 892  NYKGTIEELASNQ----YVINGEVAILNSTTIEITELPIRTWTQTYKEQVLEPMLNGTEK 947

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F + ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 948  TPPLITDYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1007

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+IV+ N+ 
Sbjct: 1008 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKP 1067

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  E       +E+E    +P   +G     ++Y
Sbjct: 1068 KKELIKVLIQRGYDSDPVKAWKEAQQKVPEEEENEENEESESESTSPAAESGPT---FNY 1124

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   RD+  +E++ L+K TP  LW +DL A   +L+ ++  + +
Sbjct: 1125 LLDMPLWYLTKEKKDELCKQRDEKEQELNTLKKKTPSDLWKEDLAAFVEELEVVEAKEKQ 1184

Query: 1191 AEE 1193
             E+
Sbjct: 1185 DEQ 1187


>gi|410911494|ref|XP_003969225.1| PREDICTED: DNA topoisomerase 2-beta-like [Takifugu rubripes]
          Length = 1605

 Score = 1171 bits (3030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1201 (50%), Positives = 821/1201 (68%), Gaps = 78/1201 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++E+   M  R ISYVPGLYKIFDE
Sbjct: 39   SVERVYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDEDV-GMNQREISYVPGLYKIFDE 97

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M A+K+ ID E + IS+ N+G G+PV  H++E +YVP LIFGHLLT
Sbjct: 98   ILVNAADNKQRDKNMTAIKISIDPESNTISIWNNGKGIPVVEHKDEKMYVPALIFGHLLT 157

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD  KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K S+P + 
Sbjct: 158  SSNYDDEEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYRHSFKQTWQNNMTKTSDPKV- 216

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +GD++T V+F+PDL+KF M  L+ D++AL+ +R  D+AG   K VKV LNG ++PV 
Sbjct: 217  KFFDGDDFTCVTFQPDLSKFKMEKLDKDIIALLTRRAYDVAGSC-KGVKVTLNGKKLPVN 275

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   +E VNERWE+C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 276  GFRSYVDLYVKDKLDETGVALKVVNEAVNERWEVCLTLSEKGFQQISFVNSIATTKGGRH 335

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            +DYV +Q+   ++ VV KKNK    VK   VKNH+WVFVNALI+NP+FDSQTKE +TL+ 
Sbjct: 336  IDYVVDQIVAKLIEVVKKKNKAGVTVKPFQVKNHIWVFVNALIENPSFDSQTKENMTLQT 395

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC LS++F++  T   GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 396  KSFGSKCPLSDKFIRAAT-NCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDA 454

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREA+  Q++ N
Sbjct: 455  NDAGGKHSSECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIMEN 514

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   ++SLRYG +MIMTDQ                      
Sbjct: 515  AEINNIIKIVGLQYKKSYDDPESLRSLRYGKIMIMTDQ---------------------- 552

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINF H  WPSLLK  +FL EFITPIVKAT KN + ++FYS+P+
Sbjct: 553  ------DQDGSHIKGLLINFFHHNWPSLLK-HTFLEEFITPIVKAT-KNKQEMAFYSIPE 604

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+    N  SW IKYYKGLGTSTSKE KEYF  +  H+  F +   +D  AI LAF
Sbjct: 605  FDEWKKHTE-NYKSWHIKYYKGLGTSTSKEAKEYFAEMEKHRITFRYSGAEDDAAITLAF 663

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKK + RK+WL  F            P  +L   + +++ Y+DF+NKELILFS +D +R
Sbjct: 664  SKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGSQARHLSYNDFINKELILFSNSDNER 723

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDGLKPGQRK+LF   KRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 724  SIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 783

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+N+LQP GQFGTR  GGKDAAS RYIFT LSP+ + LFP  D  LL +L +D 
Sbjct: 784  NFVGSNNLNILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPAVDSNLLKFLYDDN 843

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VLVNG+EGIGTGW+  IPNY+ R+IV N+ R+LN +    M P Y+
Sbjct: 844  QKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDVREIVNNIYRMLNHQDPLQMLPSYK 903

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F G I +    +    Y V+G +  +++ T+ + ELP+R WTQ Y+E  LE ++   D+
Sbjct: 904  NFKGVIHELGQNQ----YLVSGEVSVIDKNTIEVTELPVRTWTQAYKESVLEPMLQGSDK 959

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V +SEE + + +  GL K FKL ++++ ++M LFD  G +
Sbjct: 960  TPALINDYKEYHTDTTVKFLVRMSEEKLAQAESVGLHKVFKLQSSLTCNSMVLFDHMGCM 1019

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            K+Y++ + IL+EFF +RL +Y+ RK   + +L  E  KL N+ RF+L  + G++ + N+ 
Sbjct: 1020 KRYESVQDILKEFFELRLHYYKLRKDWLVGSLGAEAAKLSNQARFVLEKIEGKVSIENKS 1079

Query: 1077 RTDLLLELRQKGF--TPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLS 1133
            + +L+  L QKGF   P    +K+ E     A +E   +E +  + +G  S  +++Y+L+
Sbjct: 1080 KRELIRMLVQKGFESDPVAAWTKAQEK----ALEEDGGNESDTSLDSGSTSGPNFNYILN 1135

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEE 1193
            M +  LT E+V+ LL  RD    E+++L+K +PE LW +DL      ++EL+K +A   E
Sbjct: 1136 MPLWCLTKERVEELLKQRDLKRGELNELQKKSPEDLWKEDLAVF---VEELEKLEAMERE 1192

Query: 1194 E 1194
            E
Sbjct: 1193 E 1193


>gi|395826472|ref|XP_003786442.1| PREDICTED: DNA topoisomerase 2-alpha isoform 2 [Otolemur garnettii]
          Length = 1532

 Score = 1171 bits (3029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1201 (51%), Positives = 817/1201 (68%), Gaps = 72/1201 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDSENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWKDNMGRSGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +   HE+VN+RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKVDETGNPLKVIHEQVNQRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAVG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS  CTLILTEGDSAK LA++GL VVGRD++G+FPLRGKLLNVREAS  Q++ N
Sbjct: 445  NDAGGRNSTDCTLILTEGDSAKTLAVSGLGVVGRDKYGIFPLRGKLLNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEIAFYSIPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKNSTP-NYKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+++ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQVDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLL+P GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLRPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +++Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYKEYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +F+ +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDFYELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID----YDYLL 1132
            + +L+  L Q+G+   P  +           DE EES+   +        D    ++YLL
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEDENEESDTEKDTEKSDSVTDSGPTFNYLL 1129

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1192
             M +  LT EK   L   R++  +E+D L+K TP  LW +DL     +L+ ++  + + E
Sbjct: 1130 DMPLWYLTKEKKDELCKLRNEKEQELDTLKKKTPADLWKEDLAVFIEELEAVEAKEKQDE 1189

Query: 1193 E 1193
            +
Sbjct: 1190 Q 1190


>gi|395826470|ref|XP_003786441.1| PREDICTED: DNA topoisomerase 2-alpha isoform 1 [Otolemur garnettii]
          Length = 1533

 Score = 1170 bits (3028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1202 (51%), Positives = 819/1202 (68%), Gaps = 75/1202 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDSENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWKDNMGRSGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +   HE+VN+RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKVDETGNPLKVIHEQVNQRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAVG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS  CTLILTEGDSAK LA++GL VVGRD++G+FPLRGKLLNVREAS  Q++ N
Sbjct: 445  NDAGGRNSTDCTLILTEGDSAKTLAVSGLGVVGRDKYGIFPLRGKLLNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEIAFYSIPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKNSTP-NYKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+++ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQVDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLL+P GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLRPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +++Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYKEYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +F+ +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDFYELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID----YDYLL 1132
            + +L+  L Q+G+   P  +           DE EES+   +        D    ++YLL
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEDENEESDTEKDTEKSDSVTDSGPTFNYLL 1129

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1192
             M +  LT EK   L   R++  +E+D L+K TP  LW +DL      ++EL+  +A+ +
Sbjct: 1130 DMPLWYLTKEKKDELCKLRNEKEQELDTLKKKTPADLWKEDLAVF---IEELEAVEAKEK 1186

Query: 1193 EE 1194
            ++
Sbjct: 1187 QD 1188


>gi|331251443|ref|XP_003338318.1| DNA topoisomerase 2 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1164

 Score = 1170 bits (3028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/1137 (52%), Positives = 763/1137 (67%), Gaps = 104/1137 (9%)

Query: 8    PLTTSNNANVVGPT-APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK 66
            P TT+N     GP  +  KT  E YQK SQLEH+L RPDTYIGS+E   Q +WI+++E K
Sbjct: 92   PPTTTN-----GPAGSKKKTASETYQKLSQLEHVLKRPDTYIGSVEAIRQFMWIFDKEKK 146

Query: 67   TMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE 126
            TM+++ IS+VPGLYKI DEILVNAADNKQRD  MD +KV ID E ++ISV N+G G+P+E
Sbjct: 147  TMVNKEISFVPGLYKIVDEILVNAADNKQRDDSMDTLKVTIDSEKNIISVMNNGKGIPIE 206

Query: 127  IHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLK 186
            IH+ E +Y+PELIFGHLL  SN+DD  KKTTGGRNGYGAKL NI+STEFI+E AD +  K
Sbjct: 207  IHETEQIYIPELIFGHLLAGSNFDDEEKKTTGGRNGYGAKLANIYSTEFIVEAADKQTAK 266

Query: 187  KYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNM---THLEDDVVALMKKRVV 243
            KYKQ+F NNM  K +P I++ K+G+ +TK+SFKPDL KFN+     L  D+ AL+ KRV 
Sbjct: 267  KYKQIFKNNMSVKEKPKITENKKGEEYTKISFKPDLVKFNLPAENGLAGDMEALISKRVY 326

Query: 244  DLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR----------------------- 280
            D+AG L ++VKV LN  R+ +  F +YV+MY   V                         
Sbjct: 327  DMAGTL-RNVKVWLNDERIKLTGFKKYVEMYTSGVNEAIKGSAAKALEAPGSPGNGATKT 385

Query: 281  --FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK 338
               +E   +RWEI    S+GQFQQVSF N IAT KGGTHV+++  Q+   ++  VNKK  
Sbjct: 386  PIIYEECGKRWEIAFAPSDGQFQQVSFCNSIATTKGGTHVEHIVKQLVEKIIESVNKKKA 445

Query: 339  NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSG 398
               +K + V+NHLWVFVN LI+NP FDSQTKE +TL  S FGSKC ++EEF+KKV  KSG
Sbjct: 446  KLTLKPYQVRNHLWVFVNCLIENPTFDSQTKENMTLGMSKFGSKCVMTEEFMKKVM-KSG 504

Query: 399  IVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKA 458
            ++++++ +A FK+   LKK DG+K   + GI KLEDAN AG R +  CTLILTEGDSAK+
Sbjct: 505  VIDSVMDFAKFKEEAALKKTDGSKRSRITGIVKLEDANNAGTRKAADCTLILTEGDSAKS 564

Query: 459  LAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKS 518
            LA+AGLSV+GRD +GVFPLRGKLLNVREAS  Q+LNN+EI +IK+I+GL+QG +Y +  S
Sbjct: 565  LAVAGLSVIGRDNYGVFPLRGKLLNVREASGAQLLNNAEIQHIKQIMGLQQGKKYASRDS 624

Query: 519  LRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWP 578
            LRYG LMIMTDQ                                       I FI     
Sbjct: 625  LRYGSLMIMTDQA--------------------------------------IEFI----- 641

Query: 579  SLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTS 638
                         TPIVK T K  + LSF++MP++E WKE    +   W+ KYYKGLGTS
Sbjct: 642  -------------TPIVKVTRKKEE-LSFFTMPEFEKWKEE-NDDGRGWTSKYYKGLGTS 686

Query: 639  TSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEK 698
             +K+ K+YF  ++ H+  F    + D   I++AF+KKK + RK+WL  FEPG HLDQ   
Sbjct: 687  DAKDAKKYFSRMSSHRIKFAPTQENDRHLIDMAFNKKKADDRKEWLRGFEPGTHLDQNVS 746

Query: 699  YIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYV 758
             I Y++F+NKELILFSMAD  RSIPSMVDG KPGQRK+LF  FKR    E KVAQ  GY 
Sbjct: 747  QITYTEFINKELILFSMADNIRSIPSMVDGFKPGQRKVLFACFKRKLKAEIKVAQLGGYC 806

Query: 759  SEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLS 818
            SEHSAYHHGE SL  TI+G+AQ+FVGSNNIN+L PNGQFGTR  GGKDAASARYIFT + 
Sbjct: 807  SEHSAYHHGEASLTQTIVGLAQNFVGSNNINVLSPNGQFGTRASGGKDAASARYIFTNVE 866

Query: 819  PITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRD 878
             ITR +FP  DD +L+YL +DG QIEP WY+PI+P VLVNGS GIGTGWSS IPNYNP D
Sbjct: 867  KITRVIFPPADDNVLNYLTDDGTQIEPEWYIPILPMVLVNGSSGIGTGWSSDIPNYNPVD 926

Query: 879  IVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELP 938
            IV N+RR L  E MEPMHPW+RGF G I    + EA   Y V G  ++ +E T+ I ELP
Sbjct: 927  IVNNLRRRLANEPMEPMHPWFRGFTGQI----TSEAPGKYKVLGEWDQPDEDTIEITELP 982

Query: 939  IRRWTQDYREFLESIIDQND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKK 995
            +R W Q Y+E +E+ I+  D   + ++ +R+Y  +TTV F + L+E      K+EG+ K 
Sbjct: 983  VRVWNQSYKEQIEAWINSTDKIPALVKDYREYHTETTVHFIISLTERGKDAIKKEGIEKV 1042

Query: 996  FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKL 1055
            FKL+  +S +NM  FD  G IKKY TPEQIL++F+ +RL +Y+KRK+  + +L L   +L
Sbjct: 1043 FKLSANLSITNMVCFDPSGKIKKYSTPEQILDDFYDVRLAYYQKRKEYLVNDLTLMYERL 1102

Query: 1056 ENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEE 1112
             N+ RF+L ++  ++VV+NRK+ +++ ELR+  F PFP  +K      AG  D+ +E
Sbjct: 1103 SNQARFVLMIIEKKLVVSNRKKAEIVAELRKLEFGPFPVKAK---PKTAGDPDQADE 1156


>gi|148222806|ref|NP_001082502.1| topoisomerase (DNA) II alpha 170kDa [Xenopus laevis]
 gi|47939759|gb|AAH72193.1| LOC398512 protein [Xenopus laevis]
          Length = 1579

 Score = 1170 bits (3027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1221 (51%), Positives = 817/1221 (66%), Gaps = 81/1221 (6%)

Query: 8    PLTTSNNANVVGPT--APNK--TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEE 63
            PL    N   VG    + NK  ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++E
Sbjct: 5    PLQPLENKTAVGKVKKSDNKRLSVERIYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDE 64

Query: 64   ESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGV 123
            + + +  R I++VPGLYKIFDEILVNAADNKQRDP M  +K+ ID +++ ISV N+G G+
Sbjct: 65   D-EGLNCRDITFVPGLYKIFDEILVNAADNKQRDPTMSCIKITIDPDNNTISVWNNGKGI 123

Query: 124  PVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGK 183
            PV  H+ E VYVP LIFG LLTSSNYDD+ KK TGGRNGYGAKL NIFS +F +ETA  +
Sbjct: 124  PVVEHKVEKVYVPALIFGQLLTSSNYDDDQKKVTGGRNGYGAKLCNIFSNKFTVETACRE 183

Query: 184  RLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVV 243
              K +KQ +TNNM    +P I K  EG+++T ++F+PDL+KF M  L+ D+VALM +R  
Sbjct: 184  YKKIFKQTWTNNMSNAPDPKI-KPFEGEDFTCITFQPDLSKFKMQILDKDIVALMSRRAY 242

Query: 244  DLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTL 295
            D+AG   K VKV LNG R+PV  F  YV+MY K             HE+VN+RWE+C+T+
Sbjct: 243  DVAGS-SKGVKVFLNGKRLPVSGFRTYVEMYLKDKLDETGNPFKVMHEQVNDRWEVCLTM 301

Query: 296  SEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVF 354
            SE  FQQ+SFVN IAT KGG HVDYVA+Q+   ++ VV KKNK   +VK   VKNH+WVF
Sbjct: 302  SEKGFQQISFVNSIATTKGGRHVDYVADQIVTKLIDVVKKKNKGGISVKPFQVKNHMWVF 361

Query: 355  VNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKD 414
            VNALI+NP FDSQTKE +TL+  SFGSKC LSE+F+K  T+  GIVE++L+W  FK    
Sbjct: 362  VNALIENPTFDSQTKENMTLQSKSFGSKCTLSEKFIKGATS-CGIVESILNWVKFKAQTQ 420

Query: 415  L-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFG 473
            L KK    K   ++GI KL+DAN AG RNS +CTLILTEGDSAK LA++GL VVGRDR+G
Sbjct: 421  LNKKCSAVKHTKIKGIPKLDDANDAGSRNSLECTLILTEGDSAKTLAVSGLGVVGRDRYG 480

Query: 474  VFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQ 530
            VFPLRGKLLNVREAS  Q++ N+EI NI KI+GL+    Y++   +++LRYG +MIMTDQ
Sbjct: 481  VFPLRGKLLNVREASHKQIMENAEINNIIKIVGLQYKKNYDDNESLRTLRYGKIMIMTDQ 540

Query: 531  VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
                                        D DGSHIKGLLINFIH  WPSLLK   FL EF
Sbjct: 541  ----------------------------DQDGSHIKGLLINFIHHNWPSLLK-HCFLEEF 571

Query: 591  ITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNI 650
            ITPI+K T KN + LSFYS+P++E WK +   +  +W IKYYKGLGTSTSKE KEYF ++
Sbjct: 572  ITPIIKVT-KNKQELSFYSIPEFEEWKNNTESH-KTWKIKYYKGLGTSTSKEAKEYFADM 629

Query: 651  TLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHLDQKE-K 698
              H+  F +    D  AI +AFS+KK++ RK+WL  F            P  +L  K  K
Sbjct: 630  ERHRIPFKYAGPIDDAAITMAFSRKKVDDRKEWLTNFMQDRRERRLHGLPEEYLYGKSTK 689

Query: 699  YIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYV 758
            Y+ ++DF+NKELILFS +D +RSIPS+VDGLKPGQRK+LF  FKRN  +E KVAQ +G V
Sbjct: 690  YLTFNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSV 749

Query: 759  SEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLS 818
            +E SAYHHGE SL  TI+ +AQ+FVGSNN+NLLQP GQFGTR  GGKDAAS RYIFT LS
Sbjct: 750  AEMSAYHHGEISLMMTIINLAQNFVGSNNVNLLQPIGQFGTRLHGGKDAASPRYIFTMLS 809

Query: 819  PITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRD 878
            P+ R LFP  DD +L ++ +D Q++EP WY+PIIP VLVNG+EGIGTGWS  +PNY+ R+
Sbjct: 810  PLARLLFPALDDNVLKFMYDDNQKVEPEWYIPIIPMVLVNGAEGIGTGWSCKLPNYDTRE 869

Query: 879  IVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELP 938
            IV N+RR+L+G+  + M P Y+ F G I++    +    + + G +  ++ TT+ I ELP
Sbjct: 870  IVNNIRRMLDGDEPQQMLPSYKNFKGVIQELGPNQ----FILNGEVSVLDSTTIEISELP 925

Query: 939  IRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLK 994
             R WTQ+Y+E  LE ++   ++    I  +++Y  DTTV F V ++E+ +   +  GL K
Sbjct: 926  ARTWTQNYKEQVLEPMLNGTEKTPPLITDYKEYHTDTTVRFLVKMTEQKLAEAEAAGLHK 985

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             FKL  +++ ++M LFD  G ++KY+T   IL EFF +R+++Y  RK   +  L  E  K
Sbjct: 986  VFKLQASLTCNSMVLFDHVGCLRKYETVLDILREFFDLRVKYYSLRKDWLVGMLTAEASK 1045

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEES 1113
            L N+ RFIL  + G+IV+ N+ + +L+  L Q+G+   P K  K  +          EE 
Sbjct: 1046 LSNQARFILEKIEGKIVIENKPKKELIQMLVQRGYDSDPVKTWKQTQEKEEAGELIEEEE 1105

Query: 1114 EENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKD 1173
             E           D++YLLSM +  LT EK + L   RD  N E+ DL++ +P  L+ +D
Sbjct: 1106 AEANAT-----GPDFNYLLSMPLWYLTKEKKEELCKQRDTKNTELQDLKRKSPTDLYKQD 1160

Query: 1174 LDALDMQLDELDKSDARAEEE 1194
            L A    +DELD  +A+  EE
Sbjct: 1161 LVAF---IDELDSLEAKEREE 1178


>gi|56269784|gb|AAH86970.1| Top2a protein [Danio rerio]
 gi|197247280|gb|AAI65253.1| Top2a protein [Danio rerio]
          Length = 1570

 Score = 1170 bits (3027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1196 (51%), Positives = 806/1196 (67%), Gaps = 71/1196 (5%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++E++  M  R I++VPGLYKIFDE
Sbjct: 28   SVERIYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDEDT-GMNCRDITFVPGLYKIFDE 86

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M+ +KV ID E++ ISV N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 87   ILVNAADNKQRDKTMNCIKVNIDPENNTISVWNNGKGIPVVEHKVEKVYVPALIFGQLLT 146

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFS +F +ETA  +  + +KQ + +NMG+  E  I 
Sbjct: 147  SSNYDDDEKKVTGGRNGYGAKLCNIFSLKFTVETACRESKRCFKQTWFDNMGRAGESKI- 205

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +GD++T ++F+PDLAKF M  L+ D VAL+ +R  D+AG   K V+V LNG R+P+ 
Sbjct: 206  KPFDGDDYTCITFQPDLAKFKMQALDKDTVALLTRRAYDIAGST-KGVRVLLNGKRLPIN 264

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            +F  YVD+Y K         +T  HE VNERWE+C+TLSE  FQQVSFVN IAT KGG H
Sbjct: 265  NFRTYVDLYVKDKVDETGSPLTVVHEMVNERWEVCLTLSEKGFQQVSFVNSIATTKGGRH 324

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
             DYVA+Q+ + ++ VV KKNK    VK   VKNH+W+FVN LI+NP+FDSQTKE +TL+Q
Sbjct: 325  TDYVADQIVSKLIEVVKKKNKAGVAVKPFQVKNHMWLFVNCLIENPSFDSQTKENVTLQQ 384

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             +FGS C LS++F+K+     GIVE++++W  FK    L KK    K   ++G+ KL+DA
Sbjct: 385  KNFGSACSLSDKFVKQANG-CGIVESIMNWVKFKAQAQLNKKCSAVKHTKIKGVPKLDDA 443

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG+NS  CTLILTEGDSAK LA++GL VVGRDR+GVFPLRGK+L+VREAS  Q++ N
Sbjct: 444  NDAGGKNSNSCTLILTEGDSAKTLAVSGLGVVGRDRYGVFPLRGKMLSVREASHKQIMEN 503

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KILGL+    Y++   +KSLRYG LMIMTDQ                      
Sbjct: 504  AEINNIIKILGLQYKKNYSDPESLKSLRYGKLMIMTDQ---------------------- 541

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+  +FL EFITPI+KA+NK  ++ SFYS+P+
Sbjct: 542  ------DQDGSHIKGLLINFIHHNWPSLLR-HNFLEEFITPIIKASNKKQEI-SFYSIPE 593

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +  WKE    +  SW IKYYKGLGTSTSKE KEYF ++T H+  F +    D EAI LAF
Sbjct: 594  FTEWKEK-QSSIKSWKIKYYKGLGTSTSKEAKEYFSDMTRHRIPFKYSGPADDEAITLAF 652

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK IE RK+WL  F            P  +L  Q+ K + Y DF+NKEL+LFS +D +R
Sbjct: 653  SKKMIEERKEWLTSFMINRRQRREHNLPEEYLYGQETKSLSYHDFINKELVLFSNSDNER 712

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIP MVDGLKPGQRK++FC FKRN  +E KVAQ +G V+E SAYHHGE SL  TI+G+AQ
Sbjct: 713  SIPCMVDGLKPGQRKVVFCCFKRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQ 772

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD LL Y  +D 
Sbjct: 773  NFVGSNNLNLLQPLGQFGTRLHGGKDSASPRYIFTMLSTLARLLFPVVDDNLLKYNYDDN 832

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
             ++EP WYMPIIP VL NG EGIGTGW+S IPNY+ R+I+ N+ R+LNGE   PM P Y+
Sbjct: 833  LRVEPEWYMPIIPLVLANGGEGIGTGWASRIPNYDVREIINNIHRMLNGEEPLPMLPSYK 892

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQND- 958
            GF GTI++ A  +    Y   G +  ++ TT+ I ELP++ WTQ Y+E  LE +++  + 
Sbjct: 893  GFKGTIDELAKNQ----YVNNGEVAIIDSTTIEITELPVKTWTQTYKENVLEVMLNGTEK 948

Query: 959  --SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE +   +  GL K FKL   ++ ++M LFD  G +
Sbjct: 949  VPALITDYKEYHTDTTVRFVVKMTEERLREAEAAGLHKVFKLQNLLTCNSMVLFDHVGSL 1008

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY++ + IL+EFF +R+++Y  RK   +  L  E  KL N+ RFIL  + G +V+ N+ 
Sbjct: 1009 KKYESVQDILKEFFELRMKYYVLRKDWLVGMLGAESAKLSNQARFILEKIQGTLVIENKP 1068

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAI 1136
            + +L+  L+Q G+   P  +           D  ++ E+  E  +G    DY+YLLSM +
Sbjct: 1069 KKELIRMLQQMGYDSDPVKAWKDAQEKEEEEDAEDDDEKEKEDTSGP---DYNYLLSMPM 1125

Query: 1137 GTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1192
              LT EK   L   RD    E++ L+   P  LW +DL A   +L+ +++ +  ++
Sbjct: 1126 WYLTKEKKDELCKQRDAKMTELNTLKMKAPADLWKEDLAAFTEELERVEQKEKESQ 1181


>gi|327283546|ref|XP_003226502.1| PREDICTED: DNA topoisomerase 2-beta-like [Anolis carolinensis]
          Length = 1640

 Score = 1170 bits (3027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 616/1199 (51%), Positives = 814/1199 (67%), Gaps = 72/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++E+   M  R I++VPGLYKIFDE
Sbjct: 62   SVERVYQKKTQLEHILLRPDTYIGSVEPVTQLMWVFDEDI-GMNCREITFVPGLYKIFDE 120

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +K+ ID E ++IS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 121  ILVNAADNKQRDKNMTCIKISIDAESNIISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 180

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K S+P I 
Sbjct: 181  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWLNNMMKTSDPKI- 239

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  EGD++T V+F+PDLAKF M  L+ D VALM +R  DLAG   K VK+  NG ++PV 
Sbjct: 240  KHFEGDDYTCVTFQPDLAKFKMEKLDKDTVALMTRRAYDLAGAC-KGVKIMFNGKKLPVN 298

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQVSFVN IAT KGG H
Sbjct: 299  GFRSYVDLYVKDKLDETGVALKVTHELANERWDVCLTLSEKGFQQVSFVNSIATTKGGRH 358

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +Q+   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP+FDSQTKE +TL+ 
Sbjct: 359  VDYVVDQIVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPSFDSQTKENMTLQP 418

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 419  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDA 477

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S  CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 478  NDAGGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 537

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y +   +KSLRYG +MIMTDQ                      
Sbjct: 538  AEINNIIKIVGLQYKKSYEDPESLKSLRYGKIMIMTDQ---------------------- 575

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + L+FYS+P+
Sbjct: 576  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELAFYSIPE 627

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 628  FDEWKKHME-NHKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 686

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 687  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 746

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF   KRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 747  SIPSLVDGFKPGQRKVLFTCCKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 806

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN++LLQP GQFGTR  GGKDAAS RYIFT LSP+ R LFP  DD LL +L +D 
Sbjct: 807  NFVGSNNVSLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARLLFPAVDDNLLKFLYDDN 866

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VLVNG+EGIGTGW+  IPNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 867  QRVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDTREIVNNVRRMLDGLDPLPMLPNYK 926

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F G I++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   ++
Sbjct: 927  NFKGAIQELGQNQ----YVVSGEIYVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTEK 982

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL T+++ ++M LFD  G +
Sbjct: 983  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSMVLFDHMGCL 1042

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+     L  E  KL N+ RFIL  + G+I + N+ 
Sbjct: 1043 KKYETVQDILKEFFDLRLNYYNLRKEWLAGILGAESTKLNNQARFILEKIQGKIAIENKS 1102

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEE-SEENPEVVNGVQSIDYDYLLSMA 1135
            + DL+  L Q+G+   P  +       A   +E +  ++++          D++Y+L+M+
Sbjct: 1103 KRDLIQLLVQRGYESDPVKAWKEAQEKAAEEEEMQNLNDDSSSSSGSTSGPDFNYILNMS 1162

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            +  LT EKV+ ++  RD   ++++DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1163 LWCLTKEKVEDIIKQRDSKGKDLNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1218


>gi|18369810|dbj|BAB84100.1| DNA topoisomerase II [Aspergillus flavus]
          Length = 1219

 Score = 1170 bits (3026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1188 (51%), Positives = 805/1188 (67%), Gaps = 70/1188 (5%)

Query: 12   SNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR 71
            +N A+  GP   N  + E Y K +QLEHI+ RPDTYIGSIE+ +Q +W+Y  ES  M  R
Sbjct: 10   TNEADA-GPKDSN--VSEKYHKLTQLEHIIKRPDTYIGSIERTSQQMWVYSTESDGMEFR 66

Query: 72   TISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEE 131
             +SYVPGLYKIFDEI+VNAADNKQ D  MD ++V I +E   ISV N+G G+P+E+H +E
Sbjct: 67   EVSYVPGLYKIFDEIVVNAADNKQNDANMDEIRVTISRETGEISVWNNGRGIPIEMHAKE 126

Query: 132  GVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQV 191
             +YVPELIFGHLLTSSNYDD  +K TGGRNG+GAKL N+FSTEF IET D ++ KKYKQ 
Sbjct: 127  KIYVPELIFGHLLTSSNYDDTQQKVTGGRNGFGAKLCNVFSTEFSIETQDSRQKKKYKQT 186

Query: 192  FTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGK 251
            +T+NM K  +  I+  K GD++TKV+FKPD AKF M  +++D  AL+K+RV DLAG    
Sbjct: 187  WTSNMTKMGKAKITDAK-GDDYTKVTFKPDYAKFGMDGMDNDFEALVKRRVYDLAGT--A 243

Query: 252  SVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE---------------RWEICVTLS 296
             V V+LNG RVPV++F +Y++MY K++ R  ER ++               RWE+   +S
Sbjct: 244  KVAVKLNGSRVPVRNFKKYMEMYTKAIRR--ERGDDGPAAKDEIITCSPDPRWEVGFAVS 301

Query: 297  EGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFV 355
            +G FQQVSFVN IAT  GGTHV+Y+A+Q+ + +   V KKNKN A +K   ++NH+++FV
Sbjct: 302  DGSFQQVSFVNSIATTSGGTHVNYIADQICSKLADQVKKKNKNGATLKPAQIRNHIFIFV 361

Query: 356  NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
            NA I NPAF SQTKE LT + S FGSKC L E+F KK+  K+ ++  +L +A  K  + L
Sbjct: 362  NAQIVNPAFTSQTKEQLTTKSSQFGSKCVLEEDFYKKIL-KTDVMSNILHFAQQKADQML 420

Query: 416  KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVF 475
            KK DG +   +    KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVF
Sbjct: 421  KKTDGGRRARMNN-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVF 479

Query: 476  PLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAP 535
            PLRGKLLNVR+A+  Q+  N+EI NIK  LGL+   EY + + LRYGHLMIMTDQ     
Sbjct: 480  PLRGKLLNVRDATFEQISKNAEIQNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ----- 534

Query: 536  LSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIV 595
                                   DHDGSHIKGLLINF+ + +PSLL+IP FL+EFITPI+
Sbjct: 535  -----------------------DHDGSHIKGLLINFLQAQFPSLLRIPEFLIEFITPII 571

Query: 596  KATNKN----GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 651
            K    +     K  SF++MP+YEAWKE    +   W  KYYKGLGTST+++ + YF+++ 
Sbjct: 572  KVWKGDPKNPTKQRSFFTMPEYEAWKEE-HKHERGWEHKYYKGLGTSTTEDAQVYFRDLD 630

Query: 652  LHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELI 711
             H K+F    D +   IELAFSKKK + RK+WL QF+PG  LD     I Y+DF+NKELI
Sbjct: 631  RHLKEFHTMQDNEVGLIELAFSKKKADERKEWLRQFKPGTFLDHSVSKISYTDFINKELI 690

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            LFSMAD  RSIPS+VDGLKPGQRK+L+  F+RN  K+ KV + +G+VS  +AY HG+ SL
Sbjct: 691  LFSMADNVRSIPSVVDGLKPGQRKVLYTCFRRNLKKDMKVVELAGHVSGMTAYQHGDISL 750

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
              TI+G+AQ FVGSNN+N L+P+G FG+R QGG D ASARYI+TRLSP  R +F   DD 
Sbjct: 751  QQTIVGLAQSFVGSNNVNCLEPSGNFGSRLQGGSDCASARYIYTRLSPFARRVFHAHDDP 810

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            LL Y  +DG++IEP  Y+P++P +LVNG++GIGTGWSS IPNYNP DIV N++RL++GE 
Sbjct: 811  LLTYNEDDGEKIEPEIYVPVVPMILVNGADGIGTGWSSSIPNYNPEDIVDNLKRLMDGEE 870

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLE 951
              PM PW+RGF G +        G  +  +GII+E  E  + I ELPIR WTQD+++ LE
Sbjct: 871  TRPMQPWFRGFTGEVTDV----GGDRFKFSGIIKETGEKEVEITELPIRTWTQDFKDKLE 926

Query: 952  SII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHL 1009
             II  ++  SFI+ ++ Y+  T V F + L E++M     EGL +KFKL+ T++T+N+  
Sbjct: 927  DIIKAEKTPSFIKDYKDYNTHTKVHFVIQLDEKNMKSALSEGLEEKFKLSKTVATTNLVA 986

Query: 1010 FDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGE 1069
            FD +G I KY T + IL+EF+  RL+FYEKRK+ QL  L+ EL KL N+ RF+  +++G+
Sbjct: 987  FDPEGRITKYATVDDILKEFYTYRLKFYEKRKQYQLSQLQKELDKLSNQARFVQEIIDGK 1046

Query: 1070 IVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNG--VQSID 1127
            +VV+ +K+  L+ EL+ KG+  FPK +   EAV AG  +   E +++        V S  
Sbjct: 1047 LVVSKKKKNVLVQELKDKGYKAFPKVA---EAVKAGEEERVVEEDDDESDSQDTEVLSSA 1103

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            YDYLL MAI +LT E+V+ L     +   EVD L K + E +W +DLD
Sbjct: 1104 YDYLLGMAIWSLTQERVEKLRRQIGEKEVEVDALIKMSKEDIWKRDLD 1151


>gi|324500558|gb|ADY40259.1| DNA topoisomerase 2 [Ascaris suum]
          Length = 1586

 Score = 1170 bits (3026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 655/1337 (48%), Positives = 871/1337 (65%), Gaps = 114/1337 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQA-LWIYEEESKTMIHRTISYVPGLYKIFD 84
            +IE++YQKKSQLEHILLRPDTYIGS+E   +A +W+Y+ E++ ++ R ISYVPGLYKIFD
Sbjct: 80   SIEKIYQKKSQLEHILLRPDTYIGSVEHTDRAPMWVYDAEAERIVQRDISYVPGLYKIFD 139

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            E+LVNAADNKQRDPKM  +KV I++E + I+V N+G G+PV  H+ E VYVPELIFG LL
Sbjct: 140  EVLVNAADNKQRDPKMSTIKVTINKEKNEIAVFNNGKGIPVVRHKVENVYVPELIFGTLL 199

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ +K TGGRNGYGAKL NIFS EF +ET+  +  K +KQ + NNM K  EP I
Sbjct: 200  TSSNYDDSERKVTGGRNGYGAKLCNIFSKEFTVETSSKEYGKVFKQTWINNMTKDKEPFI 259

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
             K   G+++T+V+FKPDL+KF MT L+DD+VALM +R  D+AG   K VKV LN   +PV
Sbjct: 260  GKS-SGEDFTRVTFKPDLSKFKMTELDDDIVALMSRRAYDVAGST-KGVKVYLNNKLLPV 317

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            + F +YVD Y K             +E  NERW++ +T+SE  FQQVSFVN IAT KGG 
Sbjct: 318  QGFKQYVDQYAKHNLDSQGEPYKVIYETANERWDVAITVSEKGFQQVSFVNSIATTKGGR 377

Query: 317  HVDYVANQVANHVMAVVNKK--NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            HVDYVA+Q+ + ++  + KK      +VK   +KNH+WVFVN LI+NP FDSQTKE LTL
Sbjct: 378  HVDYVADQITSKLIDTIKKKIGKSGISVKPFQIKNHMWVFVNCLIENPTFDSQTKEALTL 437

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLE 433
            +  SFGSKCELSE F+  V  K GIVE +++W  FKQ + L KK    +T  ++G+ KLE
Sbjct: 438  QSKSFGSKCELSERFVNSVM-KCGIVEAVMAWVRFKQQETLDKKCSSKRTSKLKGVPKLE 496

Query: 434  DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            DAN AG +NS  CTLILTEGDSAK+LA++GL VVGRDR+GVFPLRGK+LNVRE +  Q++
Sbjct: 497  DANDAGTKNSSLCTLILTEGDSAKSLAVSGLGVVGRDRYGVFPLRGKMLNVREGNHKQIM 556

Query: 494  NNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
             N+EI  + KI+GL+  ++Y+   ++K+LRYG +M+M DQ                    
Sbjct: 557  ENAEINALIKIIGLQYRLKYDKDDDMKTLRYGKVMVMADQ-------------------- 596

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                    D DGSHIKGL+INFIH  WP+L++  +F+ EFITPIVKAT K  +  SF+S+
Sbjct: 597  --------DQDGSHIKGLVINFIHYNWPALIR-RNFVEEFITPIVKAT-KGKEEYSFFSL 646

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+Y  W+ +   N  S+ IKYYKGLGTSTSKE KEYF ++  H+  F +  D+D  +I++
Sbjct: 647  PEYNEWRNNTE-NWKSYRIKYYKGLGTSTSKEAKEYFTDMARHRIRFRYAGDEDDSSIDM 705

Query: 671  AFSKKKIEARKKWLLQF--------EPG---NHL-DQKEKYIKYSDFVNKELILFSMADL 718
            AFSK+KIE RK WL  +        E G    +L D+  + I + DFVNKEL+LFS AD 
Sbjct: 706  AFSKRKIEDRKVWLTNWMAEKRDRREQGLTEEYLYDKDTRSISFKDFVNKELVLFSNADN 765

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
            +RSIPS+VDGLKPGQRK+LF  FKR   KE KVAQ +G V E SAYHHGEQSL STI+ +
Sbjct: 766  ERSIPSLVDGLKPGQRKVLFTCFKRADKKEVKVAQLAGAVGEMSAYHHGEQSLMSTIVNL 825

Query: 779  AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
            AQD+VGSNNINLL P GQFGTR QGGKD+AS RYIFT+L+P+T+ LFP  DD +L +L E
Sbjct: 826  AQDYVGSNNINLLLPIGQFGTRLQGGKDSASPRYIFTQLNPVTKALFPSVDDNVLRFLFE 885

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPW 898
            + Q+IEP WY PIIPTVLVNG+EGIGT WS+ +PNYNPR+IV N+RRL+ GE  +PM PW
Sbjct: 886  ENQRIEPEWYCPIIPTVLVNGAEGIGTAWSTKVPNYNPREIVDNIRRLIRGEDPKPMVPW 945

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQN 957
            ++ F GTIE+   +     +  +G I  + + TL I ELPIR WTQ+Y+E  LE +++ +
Sbjct: 946  FKNFRGTIEQLDDQR----FACSGEIAILRDDTLEITELPIRVWTQNYKESVLEPLLEGS 1001

Query: 958  D---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
            D   + I+ F++Y  DTTV F + +S + +   + EGL K FKL T I+TS+M LFD+ G
Sbjct: 1002 DKQPALIQDFKEYHTDTTVRFVIKMSAQKLRDAEMEGLHKVFKLQTAINTSSMVLFDAAG 1061

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             ++K+   E+I +EFF  R + Y +RK  Q   L  +  +L N+ RFIL  + GEI++ N
Sbjct: 1062 CLRKFRNVEEICKEFFETRKKKYIERKAFQEGMLRAQSERLSNQARFILAKIKGEILIEN 1121

Query: 1075 RKRTDLLLELRQKGFTPFP-------KNSKSIEAVVAGATDETEESEENPEVVNGVQS-- 1125
            +++  ++ +L +KGF P P       +  K +E       DE E  ++  E  N   S  
Sbjct: 1122 KRKVAIVEQLVKKGFDPDPVKKWKELQRRKELEMTGEVEVDEEELEQDEEEQTNVPSSPL 1181

Query: 1126 --------IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
                     DYDYL+ MAI  L+ E+   LL + +    E+  L   T   LW  DLD  
Sbjct: 1182 KKDLEKKLSDYDYLVGMAILKLSEEEKDKLLRESEAKMSELKTLEDMTWADLWNADLDNF 1241

Query: 1178 DMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKND-KKSNNARATEAMG 1236
               L EL K +A         K  G+G    K  AKR  K+A     KK+  A A+E + 
Sbjct: 1242 ---LVELQKQEA---------KEKGDGALQIKTAAKRIQKDAPGGGRKKAATALASEVLP 1289

Query: 1237 EMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSG 1296
            +   +   V+PK  +  +K  A+K +D E    P +++  A    +    +L    D+SG
Sbjct: 1290 DPTGIR--VEPKLDSMKEKYEAKKGNDGE----PKVRKPRAPKQPKKPKEEL----DESG 1339

Query: 1297 VMETEKVQVPAK-KKEP 1312
                EK++ P + KKEP
Sbjct: 1340 ----EKIEKPKRAKKEP 1352


>gi|113681126|ref|NP_001038656.1| DNA topoisomerase 2-beta [Danio rerio]
          Length = 1618

 Score = 1169 bits (3025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1199 (51%), Positives = 815/1199 (67%), Gaps = 81/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++EE   M  R IS+VPGLYKIFDE
Sbjct: 49   SVERIYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDEEI-GMNLREISFVPGLYKIFDE 107

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +K+ ID E + ISV N+G G+PV  H++E +YVP LIFGHLLT
Sbjct: 108  ILVNAADNKQRDKNMTTIKITIDPESNTISVWNNGKGIPVVEHKDEKMYVPALIFGHLLT 167

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDDN KK TGGRNGYGAKL NIFS +F +ETA  +  + +KQ +T NMGK +E  I 
Sbjct: 168  SSNYDDNEKKVTGGRNGYGAKLCNIFSLKFTVETACKEYKRSFKQTWTENMGKSNEAKI- 226

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            K  +G+++T V+F+PDLAKFNM  L+ D+VAL+ +R  D+AG C G  VKV LNG ++PV
Sbjct: 227  KYFDGEDFTCVTFQPDLAKFNMEKLDKDIVALLTRRAYDVAGSCRG--VKVILNGKKLPV 284

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
             SF  YVD Y K        ++   +E VNERWE+C+T+SE  FQQ+SFVN IAT KGG 
Sbjct: 285  NSFRSYVDFYVKDKLDETGVALKVVNETVNERWEVCLTMSEKGFQQISFVNSIATTKGGR 344

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            H+DY+ +Q+   ++ VV KKNK   +VK   VKNHLWVFVNALI+NP FDSQTKE +TL+
Sbjct: 345  HIDYIVDQIVGKLIEVVKKKNKAGVSVKPFQVKNHLWVFVNALIENPTFDSQTKENMTLQ 404

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC LSE+F++  T   GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 405  TKSFGSKCALSEKFIRAAT-NCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDD 463

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREA+  Q++ 
Sbjct: 464  ANDAGGKHSSECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIME 523

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KILGL+    Y++   +KSLRYG +MIMTDQ                     
Sbjct: 524  NAEINNIIKILGLQYKKSYDDPESLKSLRYGRIMIMTDQ--------------------- 562

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINF H  WPSLLK  +FL EFITPIVKA+ KN + +SFYS+P
Sbjct: 563  -------DQDGSHIKGLLINFFHHNWPSLLK-HTFLEEFITPIVKAS-KNKQEVSFYSIP 613

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            ++E WK+    +  +W IKYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LA
Sbjct: 614  EFEEWKKHTE-SYKTWHIKYYKGLGTSTSKEAKEYFSDMERHRIMFKYNGTEDDAAITLA 672

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKK + RK+WL  F            P  +L     +++ Y+DF+NKELILFS +D +
Sbjct: 673  FSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGTSTRHLSYNDFINKELILFSNSDNE 732

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDGLKPGQRK+LF   KRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 733  RSIPSLVDGLKPGQRKVLFTCVKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 792

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNN+N+LQP GQFGTR  GGKDAAS RYIFT LSP+ + LFP  D  LL +L +D
Sbjct: 793  QNFVGSNNVNILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPAVDSSLLKFLYDD 852

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VLVNG+EGIGTGW+  IPNY+PR+IV N+ R+LN +   PM P Y
Sbjct: 853  NQKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDPREIVNNINRMLNHQDPLPMLPSY 912

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTI +    +    Y V+G +  +++ T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 913  KNFKGTIHELGQNQ----YLVSGEVSVLDKNTIEISELPVRTWTQAYKESVLEPMLQGTD 968

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +    I  +++Y  DTTV F V ++EE + + +  GL K FKL ++++ ++M LFD  G 
Sbjct: 969  KTPPLISDYKEYHTDTTVKFVVRMTEEKLAQAEAAGLHKVFKLQSSLTCNSMVLFDHMGC 1028

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +K+Y++ ++IL+EFF +RL +Y+ RK   + +L  E  KL N+ RF+L  + G++ + N+
Sbjct: 1029 MKRYESVQEILKEFFELRLHYYKLRKDWLVGSLGAESAKLSNQARFVLEKIEGKLSIENK 1088

Query: 1076 KRTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYD 1129
             + DL+  L Q+G+   P         KS+E    G  D     +            +++
Sbjct: 1089 SKRDLIRMLVQRGYESDPVAAWNKAQEKSLEEEDGGGNDSDSSVDS-----GSFSGPNFN 1143

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSD 1188
            Y+L+M +  LT EKV+ LL  RD    E+++L+  T E+LW +DL     +LD +++ +
Sbjct: 1144 YILNMPLWCLTKEKVEELLKQRDLKKAELNELQSKTSENLWREDLAVFIEELDRVEEQE 1202


>gi|402861720|ref|XP_003895231.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-beta [Papio
            anubis]
          Length = 1599

 Score = 1168 bits (3022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1198 (51%), Positives = 802/1198 (66%), Gaps = 97/1198 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 50   SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 108

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 109  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 168

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 169  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 227

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 228  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 286

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 287  GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 346

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 347  VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 406

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 407  KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 465

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 466  NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 525

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 526  AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 563

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 564  ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 615

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 616  FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 674

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 675  SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 734

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ
Sbjct: 735  SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 794

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D 
Sbjct: 795  NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 854

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+
Sbjct: 855  QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 914

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+
Sbjct: 915  NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 970

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +
Sbjct: 971  TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1030

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR 
Sbjct: 1031 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1090

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAI 1136
            + DL+  L Q+G+   P            A  E +E                        
Sbjct: 1091 KKDLIQMLVQRGYESDP----------VKAWKEAQEKXXX----------------XXXX 1124

Query: 1137 GTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
             +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 1125 XSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1179


>gi|327349241|gb|EGE78098.1| DNA topoisomerase 2 [Ajellomyces dermatitidis ATCC 18188]
          Length = 1804

 Score = 1168 bits (3022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 658/1433 (45%), Positives = 884/1433 (61%), Gaps = 139/1433 (9%)

Query: 22   APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
            A  K   E YQK +QLEHI+ RPDTYIGSIE+ T  +W+Y  ES++M  R +SYVPGLYK
Sbjct: 125  ATPKESSERYQKLTQLEHIIKRPDTYIGSIERSTNQMWVYNSESESMEFREVSYVPGLYK 184

Query: 82   IFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            IFDEILVNAADN+  D  MD ++V +++E   ISV N+G G+P+EIH  E VY+PELIFG
Sbjct: 185  IFDEILVNAADNRHNDKNMDEIRVTVNRESGEISVWNNGRGIPIEIHSREKVYIPELIFG 244

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            HLLTSSNY+D+ +K TGGRNGYGAKL NIFSTEF +ETAD K  KKYKQ +T+NM K  +
Sbjct: 245  HLLTSSNYNDDQQKVTGGRNGYGAKLCNIFSTEFTLETADSKLKKKYKQTWTDNMSKMGK 304

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            P I+ CK GD++TKV+F PD  KF M  ++DD  AL+K+RV DLAG     V V+LNG R
Sbjct: 305  PKITDCK-GDDYTKVTFTPDFKKFGMDGIDDDFEALVKRRVYDLAGTC--KVTVKLNGSR 361

Query: 262  VPVKSFAEYVDMYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSFVNG 308
            VPV++F +Y+ MY  ++ +               +  + RWEI   +S+G FQQVSFVN 
Sbjct: 362  VPVRNFKQYMQMYTNAIKKERGEEASRDKSEIITDNPDPRWEIGFAVSDGSFQQVSFVNS 421

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            IAT  GG+HV+ VA+Q+ N ++ VV KKNK  A +K   ++NH++VFVN+ I NPAF SQ
Sbjct: 422  IATTSGGSHVNTVADQICNKLVEVVKKKNKTGATLKPAQIRNHIFVFVNSQIVNPAFTSQ 481

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
            TKE LT + S FGSKC LS++FLKK+  K+ ++E ++ +A  K  + LKK+DG +   + 
Sbjct: 482  TKEQLTTKPSQFGSKCVLSDDFLKKIL-KTQVMENIMHFAEKKADQILKKSDGNRRSRMN 540

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
               KL DAN AG ++  QCTLILTEGDSAK LAMAG ++VG D FGVFPLRGKLLNVR+A
Sbjct: 541  N-PKLTDANKAGTKDGHQCTLILTEGDSAKGLAMAGRAIVGPDLFGVFPLRGKLLNVRDA 599

Query: 488  SSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            S +Q+  N+EI NIK  LGL+   EY + K LRYGHLMIMTDQ                 
Sbjct: 600  SVDQISKNAEIQNIKNFLGLQHKKEYTDTKGLRYGHLMIMTDQ----------------- 642

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---ATNKNGKV 604
                       DHDGSHIKGLLINF    +PSLLKIP FL+EFITPIVK      KN  +
Sbjct: 643  -----------DHDGSHIKGLLINFFQVAFPSLLKIPQFLIEFITPIVKVWKGDPKNPTI 691

Query: 605  L-SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
              SF++M +YE W E + G+   W  KYYKGLGTST+ + + YF+++  H K F    D 
Sbjct: 692  SKSFFTMQEYETWLE-IHGHDKRWEKKYYKGLGTSTTDDAEIYFRDLDRHLKQFHVMRDH 750

Query: 664  DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIP 723
            + E I+LAFSKKK + RK+WL QF+PG  LD   + I Y+DF+NKELILFSMAD  RSIP
Sbjct: 751  EAELIDLAFSKKKADERKEWLRQFKPGTFLDHTTEEITYTDFINKELILFSMADNIRSIP 810

Query: 724  SMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFV 783
            S++DGLKPGQRK+L+  FK N  K+ KVA+ SGYV   +AY HG+ SL  TI+G+AQ+FV
Sbjct: 811  SVIDGLKPGQRKVLYTCFKLNVKKDMKVAELSGYVLGLTAYQHGDASLQQTIIGLAQNFV 870

Query: 784  GSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQI 843
            GSNNIN L+P+G FG+R QGG DAAS RYI+TRLSP  R +F + D  LL Y  +DGQ I
Sbjct: 871  GSNNINCLEPSGNFGSRLQGGSDAASPRYIYTRLSPFARRIFHEADGPLLTYNVDDGQVI 930

Query: 844  EPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFG 903
            EP  Y P++P +L+NG++GIGTGWS+ IPNYNP +IVAN++RL+ GE + PM PW+RGF 
Sbjct: 931  EPETYFPVVPMILINGADGIGTGWSTSIPNYNPEEIVANIKRLMVGEPVVPMQPWFRGFT 990

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFI 961
            G +        G  Y  +G   ++ +  + I ELPIR WTQD+++ LE II  ++  SFI
Sbjct: 991  GEVVSM----GGERYKFSGRFSQIGDNEIEITELPIRSWTQDFKDRLEEIIKAEKIPSFI 1046

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDT 1021
            + ++ Y+  T V F + L E+   +   EGL +K KLT T++TSN+  FDS+G I KY++
Sbjct: 1047 KDYKDYNTHTKVHFVIQLDEKHAKKAIAEGLEEKLKLTKTLATSNLVAFDSEGRITKYES 1106

Query: 1022 PEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLL 1081
            PE IL+EF+ +R++ YEKRK+ QL  ++ +L KL N+ RF+  +++G++V++ + +  L+
Sbjct: 1107 PEHILQEFYSVRIKLYEKRKQHQLSQMQKDLEKLSNQARFVQMIIDGKLVISKKPKAQLV 1166

Query: 1082 LELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNG------------VQSIDYD 1129
             EL++KGF             +A  +D  ++ E+ P VVN             + +  +D
Sbjct: 1167 QELKEKGF-----------KAIAKVSDAAKQGEKAP-VVNRDDEESSDSEDTELAANSFD 1214

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQL-DEL 1184
            YLL M + +LT E+V+ L         E+D L K + E +W  DLDA       QL DE 
Sbjct: 1215 YLLGMPLWSLTKERVEKLRRQIGDKEIEIDTLIKLSKEDIWRADLDAFLEEWKFQLEDEG 1274

Query: 1185 DKSDARAEEER---------------MKIKGNGNGDAG---PKIVAKRAPKNARKNDKKS 1226
             +   RA+  R                K   + + D G   PK  AK    N  K     
Sbjct: 1275 RRQAKRAKSARRVSTKLKTATKGGKKRKAADDDDSDFGLPKPKKSAKSTTINRIKPQADL 1334

Query: 1227 NNARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLAST 1286
             N  ++       N ++  KP    G   A      DDE+D  P++   L     + AS+
Sbjct: 1335 LNYVSS-------NASRKPKPSSDKGFGGADGASGLDDEDDFEPEI---LPTRKPRAASS 1384

Query: 1287 KLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIII------DDDE 1340
            K     +  G+ + ++ +   K KE S RTA+ K     E  D + +  I      DD +
Sbjct: 1385 KPMKPIELDGLSDFDEFE--PKVKETS-RTASPK---PAEPRDVDMDTGIGGPSEPDDIQ 1438

Query: 1341 AFEI------AAPEEGKKGGRKAAGNS------KAAKPAAETKKRGPAKKQQP 1381
               +      A P +GK G   AA  S       AA P  ++KK  P  ++ P
Sbjct: 1439 PMPVPPKKTKAQPSKGKPGKSAAALESDFEESKSAALPEKKSKKAAPPPQRIP 1491


>gi|440492872|gb|ELQ75404.1| DNA topoisomerase type II, partial [Trachipleistophora hominis]
          Length = 1474

 Score = 1168 bits (3021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/1203 (50%), Positives = 799/1203 (66%), Gaps = 109/1203 (9%)

Query: 20   PTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGL 79
            P+   KTIE++YQKK+ +EHILLRP+TYIGS++ HTQ +++ E  +  ++ ++I+YVPGL
Sbjct: 32   PSMEKKTIEQLYQKKTPIEHILLRPETYIGSVDHHTQPMYVLE--NGKIVSKSITYVPGL 89

Query: 80   YKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELI 139
            YKIFDEILVNAADNK RDP M   K+ +D   D ISV N+G GVP+++H++E VYVPELI
Sbjct: 90   YKIFDEILVNAADNKIRDPSMS--KLCVDIAGDKISVWNNGKGVPIKMHKKENVYVPELI 147

Query: 140  FGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
            FG LLTSSNYDD  KK TGGRNGYGAKL NIFS+EFIIETAD K    Y Q +++NM K+
Sbjct: 148  FGQLLTSSNYDDKEKKVTGGRNGYGAKLCNIFSSEFIIETADSKENITYYQRYSDNMSKR 207

Query: 200  SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
             EP I+K +  +++TK++F PDL +F M +L++DV++L+KKRV D+   + K VKV LNG
Sbjct: 208  EEPVITKQRVRESFTKITFTPDLKRFKMENLDEDVISLLKKRVYDMCATI-KRVKVFLNG 266

Query: 260  HRVPVKSFAEYVDMY-PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
             ++P+ SF +YV +Y    V   HE VNERWE+ V LS+ QFQQVSFVN I TIKGGTHV
Sbjct: 267  EQIPISSFKQYVSLYLGDDVKVVHEVVNERWEVAVVLSDEQFQQVSFVNSICTIKGGTHV 326

Query: 319  DYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            ++V +Q+   V+  V KK+KN  +K   V+N +++FVNALI+N AFDSQTKETLTLR SS
Sbjct: 327  NHVLDQLVEPVIERVQKKDKNLVIKPFFVRNSIFIFVNALIENAAFDSQTKETLTLRVSS 386

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLA 438
            FGS+C LS++F+K   A   + + +LS A  K SK LKK DG+K+  + GI KL DANLA
Sbjct: 387  FGSRCTLSDDFVKHTVAL--LSDRVLSQALAKMSKQLKKTDGSKSSKITGIEKLSDANLA 444

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            G +NS++C+LILTEGDSAK LA++GLSVVGRD +GVFPLRGKLLNVREA+  Q++ N E+
Sbjct: 445  GTKNSQKCSLILTEGDSAKTLAISGLSVVGRDYYGVFPLRGKLLNVREANHKQIMENEEL 504

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
             N+KKIL L+   +Y + +SLRYGH++IMTDQ                            
Sbjct: 505  NNLKKILALQHHKDYTSTESLRYGHVIIMTDQ---------------------------- 536

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK--------------- 603
            DHDGSHIKGL+INF   F+PSLL+I  FL EFITPIV+ T   G                
Sbjct: 537  DHDGSHIKGLIINFFDHFFPSLLRIEGFLKEFITPIVRVTKTKGSRTSRSNSEDDSDEHT 596

Query: 604  -----------VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITL 652
                       V+ F+++P+YE WK S   +  +W++KYYKGLGTSTSK+ K+YF N+  
Sbjct: 597  NTPASSDPVGTVIDFFTIPEYEDWKNS-TPDIKNWTVKYYKGLGTSTSKDAKQYFSNLEK 655

Query: 653  HKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELIL 712
            H K F     +D   I+LAF+KKK + RK WL    PG  LD     I   DF+NKELIL
Sbjct: 656  HVKSFTLLTTEDQSLIDLAFNKKKADDRKLWLKNCVPGTFLDHSAHKIPIRDFINKELIL 715

Query: 713  FSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLA 772
            FSMAD  RSIPS+VDG KPGQRK+++C FKRN   E KVAQ  GYV+EHSAYHHGE SL 
Sbjct: 716  FSMADNVRSIPSVVDGFKPGQRKVMYCCFKRNLKSEIKVAQLVGYVAEHSAYHHGEVSLQ 775

Query: 773  STILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKL 832
             TI+ +A DFVGSNNINLL P GQFGTR QGGKDAASARYIFT L+ ITR +F + DD L
Sbjct: 776  QTIIKLAHDFVGSNNINLLMPEGQFGTRLQGGKDAASARYIFTNLASITRKIFVESDDAL 835

Query: 833  LDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMM 892
            L+Y+ ED  +IEP++Y+PI+P VLVNG++GIGTGW + IPNY+  +I+ N++ LL+ + M
Sbjct: 836  LNYITEDNMKIEPSFYVPIVPMVLVNGADGIGTGWLTKIPNYDLLEIIDNIKLLLDDQEM 895

Query: 893  EPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLES 952
              M P+YRGF G IE    K+    Y ++GI  +V+   L I ELP++ WTQ Y+EFLE 
Sbjct: 896  NTMVPFYRGFKGEIEDLGGKK----YRISGIY-DVDGDNLTITELPVKIWTQTYKEFLEK 950

Query: 953  IIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDS 1012
             I++ D  ++ FR+Y  + +V FEV L+    +        KKF L++    +N   FD 
Sbjct: 951  KIEKGD--VKEFREYHTERSVHFEVNLAVSGEID-------KKFSLSSINIFNNFVCFDR 1001

Query: 1013 KGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVV 1072
             G IKKY++ E+IL EF+ IRLEFY  RK   L  LE +L +L NKVRFI  VVNG +VV
Sbjct: 1002 HGKIKKYESAEEILREFYSIRLEFYNLRKAHMLNTLEEQLKRLHNKVRFIKEVVNGTLVV 1061

Query: 1073 NNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLL 1132
            + RK+TD++ EL +K +                                      YDYLL
Sbjct: 1062 SKRKKTDIIAELERKEYYKIEDT--------------------------------YDYLL 1089

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1192
            +MAI +LTLEK++ L  +      E D+L   + + LW+ DL+ L  +   L + D R  
Sbjct: 1090 NMAILSLTLEKIERLNEEYRNTQREYDELLGKSAKELWIYDLEVLRTEYLRLLEDDERVM 1149

Query: 1193 EER 1195
             E+
Sbjct: 1150 NEQ 1152


>gi|112983266|ref|NP_001037009.1| DNA topoisomerase 2 [Bombyx mori]
 gi|6094494|sp|O16140.1|TOP2_BOMMO RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
            II; Short=TOPOII
 gi|2338552|gb|AAB67168.1| topoisomerase II [Bombyx mori]
          Length = 1547

 Score = 1168 bits (3021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 628/1244 (50%), Positives = 820/1244 (65%), Gaps = 107/1244 (8%)

Query: 11   TSNNANVVGPTAPNK----TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK 66
            +S   N  G  AP K     IE++YQKKSQLEHILLRPDTYIGS+E+ T+ +W+Y++  +
Sbjct: 12   SSPKQNGTGEPAPAKGQKGAIEKIYQKKSQLEHILLRPDTYIGSVERATETMWVYDKVKE 71

Query: 67   TMIHRTISYVP-----GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGD 121
             M+ + ++ VP     GLYKI+DEILVNAADNKQRDPKMD +K+ I+QE + ISV+N+G 
Sbjct: 72   CMMQKELTSVPDCSFPGLYKIYDEILVNAADNKQRDPKMDVIKIDINQETNTISVYNNGS 131

Query: 122  GVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 181
            G+PV +H++E +YVP +IFGHLLTSSNY+D  +K TGGRNGYGAKL NIFST+F +ETA 
Sbjct: 132  GIPVVMHKDEKMYVPTMIFGHLLTSSNYNDEEEKVTGGRNGYGAKLCNIFSTKFTVETAS 191

Query: 182  GKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKR 241
             +  K +KQ + +NM K SEP I    + D++TK+ F PDLAKF M  LEDD+V LM +R
Sbjct: 192  KQYKKHFKQTWGSNMTKASEPKIKDSGKDDDFTKIVFSPDLAKFKMEKLEDDIVLLMSRR 251

Query: 242  VVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICV 293
              D+A    + VKV LNG R+ +  F +YVD+Y K         +   +E+V++RWE+ +
Sbjct: 252  AYDVAAS-SQGVKVYLNGERLKINKFKDYVDLYIKGKDDENGQPLKVVYEKVSDRWEVAL 310

Query: 294  TLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLW 352
            T+S+  FQQVSFVN IAT KGG HVD VA+ V  +V+ V+ KKNK   N+K + VK H+W
Sbjct: 311  TISDMGFQQVSFVNSIATTKGGKHVDTVADSVVKNVLEVLKKKNKGGVNIKPYQVKTHMW 370

Query: 353  VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS 412
            +FVN LI NP FDSQTKE +TL+  SFGSKC LSE+F+  VT K G+VE++L+WA FK  
Sbjct: 371  LFVNCLIVNPTFDSQTKENMTLQAKSFGSKCNLSEKFITAVT-KCGLVESVLTWAKFKAQ 429

Query: 413  KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF 472
              L K  G K   ++GI KLEDAN AG +N+  CTLILTEGDSAK LA++GLSVVGRD +
Sbjct: 430  DQLVKASGKKQSKLKGIPKLEDANDAGTKNAHLCTLILTEGDSAKTLAVSGLSVVGRDHY 489

Query: 473  GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNV---KSLRYGHLMIMTD 529
            GVFPL GK LNVR+AS  QVL N EI N+ KILGL+   +YN+V   K+LRYG +MIM D
Sbjct: 490  GVFPLEGKPLNVRDASHKQVLENVEINNLIKILGLQYKKKYNSVDDLKTLRYGKVMIMAD 549

Query: 530  QVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVE 589
            Q                            D DGSHIKGL+INFIH  WP LLK+P FL E
Sbjct: 550  Q----------------------------DQDGSHIKGLIINFIHHNWPELLKLP-FLEE 580

Query: 590  FITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
            FITPIVKAT K+ K +SFYS+P++E WK+    N  +++IKYYKGLGTSTSKE KEYFQN
Sbjct: 581  FITPIVKATKKD-KEISFYSLPEFEEWKKETE-NHHTYNIKYYKGLGTSTSKEAKEYFQN 638

Query: 650  ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQ---------KEKY- 699
            +  H+  F +    D   IELAFSKK  + RK+WL      NH+D+          E+Y 
Sbjct: 639  MDRHRIRFKYSGPTDDHHIELAFSKKGADQRKEWLT-----NHMDEVKRRKEIGLSERYL 693

Query: 700  -------IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVA 752
                   + YSDFVN EL+LFS  D  RSIPSM+DGLKPGQRK++F   KRN  +E KVA
Sbjct: 694  YTKETKTVTYSDFVNLELVLFSNGDNVRSIPSMIDGLKPGQRKVIFTCIKRNDKREVKVA 753

Query: 753  QFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARY 812
            Q +G V+EHSAYHHGEQSLA TI+ +AQ++VGSNNINLL+P GQFGTR  GGKD+AS RY
Sbjct: 754  QLAGSVAEHSAYHHGEQSLAMTIVNLAQNYVGSNNINLLEPRGQFGTRLSGGKDSASPRY 813

Query: 813  IFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIP 872
            IFT +SP+TR +F   DD LL +  ED Q+IEP +Y+PIIP VLVNG EGIGTGWS+ IP
Sbjct: 814  IFTLMSPLTRLIFHPHDDPLLVHEFEDNQKIEPVYYLPIIPMVLVNGVEGIGTGWSTKIP 873

Query: 873  NYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTL 932
            NYNPRDI  N+RRLL+GE  + MHPWY+ F G +E    K     Y ++G    +    +
Sbjct: 874  NYNPRDIAENLRRLLDGEKPKVMHPWYKNFKGNVEGFGDK-----YVISGEAAILPGDKI 928

Query: 933  RIKELPIRRWTQDYRE-FLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQ 989
             I ELP+  WT +Y+E  LE ++  D+    I  +R+Y+ DTTV F V L    +   + 
Sbjct: 929  EITELPVGTWTHNYKENVLEPMLGTDKVKPLISEYREYNTDTTVRFVVSLLPGKLSEIEA 988

Query: 990  EGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLE 1049
            EG+ K FKL TTIS + M+ FD    ++KYD  E+IL EF+ +R+++Y +RK      L+
Sbjct: 989  EGIHKVFKLQTTISMTCMNAFDYNCCLEKYDKVEEILREFYDLRVKYYVRRKDYLEGQLQ 1048

Query: 1050 LELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-----KNSKSIEAVVA 1104
             E  KL N+ RFIL   +  +V+ N+KR  ++ EL ++G+ P P     K +  I+ + A
Sbjct: 1049 AEADKLSNQARFILKKCDKGLVIENKKRKAMVEELIKRGYAPDPIADWKKRASKIQGLTA 1108

Query: 1105 GATDETEESEE------------NPEVVNGVQSI----DYDYLLSMAIGTLTLEKVQGLL 1148
               D+ +ESEE            +P+     Q +     ++YLL M++  LT EK   LL
Sbjct: 1109 LEDDDAQESEEEEPEPDPKGKPVDPD--KAFQQLKEVKKFNYLLGMSMWMLTKEKKDELL 1166

Query: 1149 ADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1192
              RD+   E+  L+  T   LW +DLDA  ++LDE++  + R E
Sbjct: 1167 KQRDQKLTELTTLKNKTAPMLWREDLDAFLIKLDEVEDKERREE 1210


>gi|324500526|gb|ADY40245.1| DNA topoisomerase 2 [Ascaris suum]
          Length = 1388

 Score = 1167 bits (3019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 655/1337 (48%), Positives = 871/1337 (65%), Gaps = 114/1337 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQA-LWIYEEESKTMIHRTISYVPGLYKIFD 84
            +IE++YQKKSQLEHILLRPDTYIGS+E   +A +W+Y+ E++ ++ R ISYVPGLYKIFD
Sbjct: 80   SIEKIYQKKSQLEHILLRPDTYIGSVEHTDRAPMWVYDAEAERIVQRDISYVPGLYKIFD 139

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            E+LVNAADNKQRDPKM  +KV I++E + I+V N+G G+PV  H+ E VYVPELIFG LL
Sbjct: 140  EVLVNAADNKQRDPKMSTIKVTINKEKNEIAVFNNGKGIPVVRHKVENVYVPELIFGTLL 199

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ +K TGGRNGYGAKL NIFS EF +ET+  +  K +KQ + NNM K  EP I
Sbjct: 200  TSSNYDDSERKVTGGRNGYGAKLCNIFSKEFTVETSSKEYGKVFKQTWINNMTKDKEPFI 259

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
             K   G+++T+V+FKPDL+KF MT L+DD+VALM +R  D+AG   K VKV LN   +PV
Sbjct: 260  GKS-SGEDFTRVTFKPDLSKFKMTELDDDIVALMSRRAYDVAGST-KGVKVYLNNKLLPV 317

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            + F +YVD Y K             +E  NERW++ +T+SE  FQQVSFVN IAT KGG 
Sbjct: 318  QGFKQYVDQYAKHNLDSQGEPYKVIYETANERWDVAITVSEKGFQQVSFVNSIATTKGGR 377

Query: 317  HVDYVANQVANHVMAVVNKK--NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            HVDYVA+Q+ + ++  + KK      +VK   +KNH+WVFVN LI+NP FDSQTKE LTL
Sbjct: 378  HVDYVADQITSKLIDTIKKKIGKSGISVKPFQIKNHMWVFVNCLIENPTFDSQTKEALTL 437

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLE 433
            +  SFGSKCELSE F+  V  K GIVE +++W  FKQ + L KK    +T  ++G+ KLE
Sbjct: 438  QSKSFGSKCELSERFVNSVM-KCGIVEAVMAWVRFKQQETLDKKCSSKRTSKLKGVPKLE 496

Query: 434  DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            DAN AG +NS  CTLILTEGDSAK+LA++GL VVGRDR+GVFPLRGK+LNVRE +  Q++
Sbjct: 497  DANDAGTKNSSLCTLILTEGDSAKSLAVSGLGVVGRDRYGVFPLRGKMLNVREGNHKQIM 556

Query: 494  NNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
             N+EI  + KI+GL+  ++Y+   ++K+LRYG +M+M DQ                    
Sbjct: 557  ENAEINALIKIIGLQYRLKYDKDDDMKTLRYGKVMVMADQ-------------------- 596

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                    D DGSHIKGL+INFIH  WP+L++  +F+ EFITPIVKAT K  +  SF+S+
Sbjct: 597  --------DQDGSHIKGLVINFIHYNWPALIR-RNFVEEFITPIVKAT-KGKEEYSFFSL 646

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+Y  W+ +   N  S+ IKYYKGLGTSTSKE KEYF ++  H+  F +  D+D  +I++
Sbjct: 647  PEYNEWRNNTE-NWKSYRIKYYKGLGTSTSKEAKEYFTDMARHRIRFRYAGDEDDSSIDM 705

Query: 671  AFSKKKIEARKKWLLQF--------EPG---NHL-DQKEKYIKYSDFVNKELILFSMADL 718
            AFSK+KIE RK WL  +        E G    +L D+  + I + DFVNKEL+LFS AD 
Sbjct: 706  AFSKRKIEDRKVWLTNWMAEKRDRREQGLTEEYLYDKDTRSISFKDFVNKELVLFSNADN 765

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
            +RSIPS+VDGLKPGQRK+LF  FKR   KE KVAQ +G V E SAYHHGEQSL STI+ +
Sbjct: 766  ERSIPSLVDGLKPGQRKVLFTCFKRADKKEVKVAQLAGAVGEMSAYHHGEQSLMSTIVNL 825

Query: 779  AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
            AQD+VGSNNINLL P GQFGTR QGGKD+AS RYIFT+L+P+T+ LFP  DD +L +L E
Sbjct: 826  AQDYVGSNNINLLLPIGQFGTRLQGGKDSASPRYIFTQLNPVTKALFPSVDDNVLRFLFE 885

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPW 898
            + Q+IEP WY PIIPTVLVNG+EGIGT WS+ +PNYNPR+IV N+RRL+ GE  +PM PW
Sbjct: 886  ENQRIEPEWYCPIIPTVLVNGAEGIGTAWSTKVPNYNPREIVDNIRRLIRGEDPKPMVPW 945

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQN 957
            ++ F GTIE+   +     +  +G I  + + TL I ELPIR WTQ+Y+E  LE +++ +
Sbjct: 946  FKNFRGTIEQLDDQR----FACSGEIAILRDDTLEITELPIRVWTQNYKESVLEPLLEGS 1001

Query: 958  D---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
            D   + I+ F++Y  DTTV F + +S + +   + EGL K FKL T I+TS+M LFD+ G
Sbjct: 1002 DKQPALIQDFKEYHTDTTVRFVIKMSAQKLRDAEMEGLHKVFKLQTAINTSSMVLFDAAG 1061

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             ++K+   E+I +EFF  R + Y +RK  Q   L  +  +L N+ RFIL  + GEI++ N
Sbjct: 1062 CLRKFRNVEEICKEFFETRKKKYIERKAFQEGMLRAQSERLSNQARFILAKIKGEILIEN 1121

Query: 1075 RKRTDLLLELRQKGFTPFP-------KNSKSIEAVVAGATDETEESEENPEVVNGVQS-- 1125
            +++  ++ +L +KGF P P       +  K +E       DE E  ++  E  N   S  
Sbjct: 1122 KRKVAIVEQLVKKGFDPDPVKKWKELQRRKELEMTGEVEVDEEELEQDEEEQTNVPSSPL 1181

Query: 1126 --------IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
                     DYDYL+ MAI  L+ E+   LL + +    E+  L   T   LW  DLD  
Sbjct: 1182 KKDLEKKLSDYDYLVGMAILKLSEEEKDKLLRESEAKMSELKTLEDMTWADLWNADLDNF 1241

Query: 1178 DMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKND-KKSNNARATEAMG 1236
               L EL K +A         K  G+G    K  AKR  K+A     KK+  A A+E + 
Sbjct: 1242 ---LVELQKQEA---------KEKGDGALQIKTAAKRIQKDAPGGGRKKAATALASEVLP 1289

Query: 1237 EMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSG 1296
            +   +   V+PK  +  +K  A+K +D E    P +++  A    +    +L    D+SG
Sbjct: 1290 DPTGIR--VEPKLDSMKEKYEAKKGNDGE----PKVRKPRAPKQPKKPKEEL----DESG 1339

Query: 1297 VMETEKVQVPAK-KKEP 1312
                EK++ P + KKEP
Sbjct: 1340 ----EKIEKPKRAKKEP 1352


>gi|239610333|gb|EEQ87320.1| DNA topoisomerase 2 [Ajellomyces dermatitidis ER-3]
          Length = 1804

 Score = 1166 bits (3016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 656/1433 (45%), Positives = 883/1433 (61%), Gaps = 139/1433 (9%)

Query: 22   APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
            A  K   E YQK +QLEHI+ RPDTYIGSIE+ T  +W+Y  ES++M  R +SYVPGLYK
Sbjct: 125  ATPKESSERYQKLTQLEHIIKRPDTYIGSIERSTNQMWVYNSESESMEFREVSYVPGLYK 184

Query: 82   IFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            IFDEILVNAADN+  D  MD ++V +++E   ISV N+G G+P+EIH  E VY+PELIFG
Sbjct: 185  IFDEILVNAADNRHNDKNMDEIRVTVNRESGEISVWNNGRGIPIEIHSREKVYIPELIFG 244

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            HLLTSSNY+D+ +K TGGRNGYGAKL NIFSTEF +ETAD K  KKYKQ +T+NM K  +
Sbjct: 245  HLLTSSNYNDDQQKVTGGRNGYGAKLCNIFSTEFTLETADSKLKKKYKQTWTDNMSKMGK 304

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            P I+ CK GD++TKV+F PD  KF M  ++DD  AL+K+RV DLAG     V V+LNG R
Sbjct: 305  PKITDCK-GDDYTKVTFTPDFKKFGMDGIDDDFEALVKRRVYDLAGTC--KVTVKLNGSR 361

Query: 262  VPVKSFAEYVDMYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSFVNG 308
            VPV++F +Y+ MY  ++ +               +  + RWEI   +S+G FQQVSFVN 
Sbjct: 362  VPVRNFKQYMQMYTNAIKKERGEEASRDKSEIITDNPDPRWEIGFAVSDGSFQQVSFVNS 421

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            IAT  GG+HV+ VA+Q+ N ++ VV KKNK  A +K   ++NH++VFVN+ I NPAF SQ
Sbjct: 422  IATTSGGSHVNTVADQICNKLVEVVKKKNKTGATLKPAQIRNHIFVFVNSQIVNPAFTSQ 481

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
            TKE LT + S FGSKC LS++FLKK+  K+ ++E ++ +A  K  + LKK+DG +   + 
Sbjct: 482  TKEQLTTKPSQFGSKCVLSDDFLKKIL-KTQVMENIMHFAEKKADQILKKSDGNRRSRMN 540

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
               KL DAN AG ++   CTLILTEGDSAK LAMAG ++VG D FGVFPLRGKLLNVR+A
Sbjct: 541  N-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAIVGPDLFGVFPLRGKLLNVRDA 599

Query: 488  SSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            S +Q+  N+EI NIK  LGL+   EY + K LRYGHLMIMTDQ                 
Sbjct: 600  SVDQISKNAEIQNIKNFLGLQHKKEYTDTKGLRYGHLMIMTDQ----------------- 642

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---ATNKNGKV 604
                       DHDGSHIKGLLINF    +PSLLKIP FL+EFITPIVK      KN  +
Sbjct: 643  -----------DHDGSHIKGLLINFFQVAFPSLLKIPQFLIEFITPIVKVWKGDPKNPTI 691

Query: 605  L-SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
              SF++M +YE W E + G+   W  KYYKGLGTST+ + + YF+++  H K F    D 
Sbjct: 692  SKSFFTMQEYETWLE-IHGHDKRWEKKYYKGLGTSTTDDAEIYFRDLDRHLKQFHVMRDH 750

Query: 664  DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIP 723
            + E I+LAFSKKK + RK+WL QF+PG  LD   + I Y+DF+NKELILFSMAD  RSIP
Sbjct: 751  EAELIDLAFSKKKADERKEWLRQFKPGTFLDHTTEEITYTDFINKELILFSMADNIRSIP 810

Query: 724  SMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFV 783
            S++DGLKPGQRK+L+  FK N  K+ KVA+ SGYV   +AY HG+ SL  TI+G+AQ+FV
Sbjct: 811  SVIDGLKPGQRKVLYTCFKLNVKKDMKVAELSGYVLGLTAYQHGDASLQQTIIGLAQNFV 870

Query: 784  GSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQI 843
            GSNNIN L+P+G FG+R QGG DAAS RYI+TRLSP  R +F + D  LL Y  +DGQ I
Sbjct: 871  GSNNINCLEPSGNFGSRLQGGSDAASPRYIYTRLSPFARRIFHEADGPLLTYNVDDGQVI 930

Query: 844  EPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFG 903
            EP  Y P++P +L+NG++GIGTGWS+ IPNYNP +IVAN++RL+ GE + PM PW+RGF 
Sbjct: 931  EPETYFPVVPMILINGADGIGTGWSTSIPNYNPEEIVANIKRLMVGEPVVPMQPWFRGFT 990

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFI 961
            G +        G  Y  +G   ++ +  + I ELPIR WTQD+++ LE II  ++  SFI
Sbjct: 991  GEVVSM----GGERYKFSGRFSQIGDNEIEITELPIRSWTQDFKDRLEEIIKAEKIPSFI 1046

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDT 1021
            + ++ Y+  T V F + L E+   +   EGL +K KLT T++TSN+  FDS+G I KY++
Sbjct: 1047 KDYKDYNTHTKVHFVIQLDEKHAKKAIAEGLEEKLKLTKTLATSNLVAFDSEGRITKYES 1106

Query: 1022 PEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLL 1081
            PE IL+EF+ +R++ YEKRK+ QL  ++ +L KL N+ RF+  +++G++V++ + +  L+
Sbjct: 1107 PEHILQEFYSVRIKLYEKRKQHQLSQMQKDLEKLSNQARFVQMIIDGKLVISKKPKAQLV 1166

Query: 1082 LELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNG------------VQSIDYD 1129
             EL++KGF             +A  +D  ++ E+ P VVN             + +  +D
Sbjct: 1167 QELKEKGF-----------KAIAKVSDAAKQGEKAP-VVNRDDEESSDSEDTELAANSFD 1214

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQL-DEL 1184
            YLL M + +LT E+V+ L         E+D L K + E +W  DLDA       QL DE 
Sbjct: 1215 YLLGMPLWSLTKERVEKLRRQIGDKEIEIDTLIKLSKEDIWRADLDAFLEEWKFQLEDEG 1274

Query: 1185 DKSDARAEEER---------------MKIKGNGNGDAG---PKIVAKRAPKNARKNDKKS 1226
             +   RA+  R                K   + + D G   PK  AK    N  K     
Sbjct: 1275 RRQAKRAKSARRVSTKLKTATKGGKKRKAADDDDSDFGLPKPKKSAKSTTMNRIKPQADL 1334

Query: 1227 NNARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLAST 1286
             N  ++       N ++  KP    G   A      DDE+D  P++   L     + AS+
Sbjct: 1335 LNYVSS-------NASRKPKPSSDKGFGGADGASGLDDEDDFEPEI---LPTRKPRAASS 1384

Query: 1287 KLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIII------DDDE 1340
            K     +  G+ + ++ +   K KE S RTA+ K     E  D + +  I      DD +
Sbjct: 1385 KPMKPIELDGLSDFDEFE--PKVKETS-RTASPK---PAEPRDVDMDTGIGGPSEPDDIQ 1438

Query: 1341 AFEI------AAPEEGKKGGRKAAGNS------KAAKPAAETKKRGPAKKQQP 1381
               +      A P +GK G   AA  S       AA P  +++K  P  ++ P
Sbjct: 1439 PMPVPPKKTKAQPSKGKPGKSAAALESDFEESKSAALPEKKSRKAAPPPQRIP 1491


>gi|83775666|dbj|BAE65786.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 1437

 Score = 1165 bits (3015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 602/1165 (51%), Positives = 794/1165 (68%), Gaps = 67/1165 (5%)

Query: 35   SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
            +QLEHI+ RPDTYIGSIE+ +Q +W+Y  ES  M  R +SYVPGLYKIFDEI+VNAADNK
Sbjct: 24   TQLEHIIKRPDTYIGSIERTSQQMWVYSTESDGMEFREVSYVPGLYKIFDEIVVNAADNK 83

Query: 95   QRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVK 154
            Q D  MD ++V I +E   ISV N+G G+P+E+H +E +YVPELIFGHLLTSSNYDD  +
Sbjct: 84   QNDANMDEIRVTISRETGEISVWNNGRGIPIEMHAKEKIYVPELIFGHLLTSSNYDDTQQ 143

Query: 155  KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWT 214
            K TGGRNG+GAKL N+FSTEF IET D ++ KKYKQ +T+NM K  +  I+  K GD++T
Sbjct: 144  KVTGGRNGFGAKLCNVFSTEFSIETQDSRQKKKYKQTWTSNMTKMGKAKITDAK-GDDYT 202

Query: 215  KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY 274
            KV+FKPD AKF M  +++D  AL+K+RV DLAG     V V+LNG RVPV++F +Y++MY
Sbjct: 203  KVTFKPDYAKFGMDGMDNDFEALVKRRVYDLAGTA--KVAVKLNGSRVPVRNFKKYMEMY 260

Query: 275  PKSVTRFHERVNE---------------RWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
             K++ R  ER ++               RWE+   +S+G FQQVSFVN IAT  GGTHV+
Sbjct: 261  TKAIRR--ERGDDGPAAKDEIITCSPDPRWEVGFAVSDGSFQQVSFVNSIATTSGGTHVN 318

Query: 320  YVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            Y+A+Q+ + +   V KKNKN A +K   ++NH+++FVNA I NPAF SQTKE LT + S 
Sbjct: 319  YIADQICSKLADQVKKKNKNGATLKPAQIRNHIFIFVNAQIVNPAFTSQTKEQLTTKSSQ 378

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLA 438
            FGSKC L E+F KK+  K+ ++  +L +A  K  + LKK DG +   +    KL DAN A
Sbjct: 379  FGSKCVLEEDFYKKIL-KTDVMSNILHFAQQKADQMLKKTDGGRRARMNN-PKLTDANKA 436

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            G ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+A+  Q+  N+EI
Sbjct: 437  GTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDATFEQISKNAEI 496

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
             NIK  LGL+   EY + + LRYGHLMIMTDQ                            
Sbjct: 497  QNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ---------------------------- 528

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFYSMPDYE 614
            DHDGSHIKGLLINF+ + +PSLL+IP FL+EFITPI+K    +     K  SF++MP+YE
Sbjct: 529  DHDGSHIKGLLINFLQAQFPSLLRIPEFLIEFITPIIKVWKGDPKNPTKQRSFFTMPEYE 588

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
            AWKE    +   W  KYYKGLGTST+++ + YF+++  H K+F    D +   IELAFSK
Sbjct: 589  AWKEE-HKHERGWEHKYYKGLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEVGLIELAFSK 647

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            KK + RK+WL QF+PG  LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPGQR
Sbjct: 648  KKADERKEWLRQFKPGTFLDHSVSKISYTDFINKELILFSMADNVRSIPSVVDGLKPGQR 707

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+L+  F+RN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ FVGSNN+N L+P+
Sbjct: 708  KVLYTCFRRNLKKDMKVVELAGHVSGMTAYQHGDISLQQTIVGLAQSFVGSNNVNCLEPS 767

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            G FG+R QGG D ASARYI+TRLSP  R +F   DD LL Y  +DG++IEP  Y+P++P 
Sbjct: 768  GNFGSRLQGGSDCASARYIYTRLSPFARRVFHAHDDPLLTYNEDDGEKIEPEIYVPVVPM 827

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            +LVNG++GIGTGWSS IPNYNP DIV N++RL++GE   PM PW+RGF G +        
Sbjct: 828  ILVNGADGIGTGWSSSIPNYNPEDIVDNLKRLMDGEETRPMQPWFRGFTGEVTDV----G 883

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTT 972
            G  +  +GII+E  E  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  T 
Sbjct: 884  GDRFKFSGIIKETGEKEVEITELPIRTWTQDFKDKLEDIIKAEKTPSFIKDYKDYNTHTK 943

Query: 973  VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
            V F + L E++M     EGL +KFKL+ T++T+N+  FD +G I KY T + IL+EF+  
Sbjct: 944  VHFVIQLDEKNMKSALSEGLEEKFKLSKTVATTNLVAFDPEGRITKYATVDDILKEFYTY 1003

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            RL+FYEKRK+ QL  L+ EL KL N+ RF+  +++G++VV+ +K+  L+ EL+ KG+  F
Sbjct: 1004 RLKFYEKRKQYQLSQLQKELDKLSNQARFVQEIIDGKLVVSKKKKNVLVQELKDKGYKAF 1063

Query: 1093 PKNSKSIEAVVAGATDETEESEENPEVVNG--VQSIDYDYLLSMAIGTLTLEKVQGLLAD 1150
            PK +   EAV AG  +   E +++        V S  YDYLL MAI +LT E+V+ L   
Sbjct: 1064 PKVA---EAVKAGEEERVVEEDDDESDSQDTEVLSSAYDYLLGMAIWSLTQERVEKLRRQ 1120

Query: 1151 RDKLNEEVDDLRKATPESLWVKDLD 1175
              +   EVD L K + E +W +DLD
Sbjct: 1121 IGEKEVEVDALIKMSKEDIWKRDLD 1145


>gi|195345101|ref|XP_002039114.1| Top2 [Drosophila sechellia]
 gi|194134244|gb|EDW55760.1| Top2 [Drosophila sechellia]
          Length = 1448

 Score = 1165 bits (3015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 609/1229 (49%), Positives = 832/1229 (67%), Gaps = 99/1229 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE+MYQKKSQLEHILLRPD+YIGS+E   + +W+Y+     M+ + IS+VPGLYKIFDE
Sbjct: 9    SIEQMYQKKSQLEHILLRPDSYIGSVEFTKELMWVYDNSQNRMVQKEISFVPGLYKIFDE 68

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M+ +K+ ID E +++SV N+G G+PV +H+E+ +YVP +IFGHLLT
Sbjct: 69   ILVNAADNKQRDKSMNTIKIDIDPERNIVSVWNNGQGIPVTMHKEQKMYVPTMIFGHLLT 128

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKL NIFST F +ETA  +  K +KQ + NNMGK S+  I 
Sbjct: 129  SSNYNDDEKKVTGGRNGYGAKLCNIFSTSFTVETATKEYRKSFKQTWGNNMGKASDVQI- 187

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G ++T+++F PDLAKF M  L++D+VALM +R  D+A    K V V LNG+++ V+
Sbjct: 188  KDFNGTDYTRITFSPDLAKFKMDRLDEDIVALMSRRAYDVAAS-SKGVSVFLNGNKLAVR 246

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            +F +Y+D++ KS        +   HE  NERWE+    S+  FQQVSFVN IAT KGG H
Sbjct: 247  NFKDYIDLHIKSTDEDSGPPIKIVHEVANERWEVACCPSDRGFQQVSFVNSIATYKGGRH 306

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD+V + +   ++ V+ KKNK   N+K   V+NHLWVFVN LI+NP FDSQTKE +TL+Q
Sbjct: 307  VDHVVDNLIKQLLEVLKKKNKGGINIKPFQVRNHLWVFVNCLIENPTFDSQTKENMTLQQ 366

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
              FGSKC LS++F+  ++ KSGIVE++L+WA FK   D+ K  G K+  ++GI KLEDAN
Sbjct: 367  KGFGSKCTLSDKFINNMS-KSGIVESVLAWAKFKAQNDIAKTGGRKSSKIKGIPKLEDAN 425

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AGG+NS  CTLILTEGDSAK+LA++GL V+GRD +GVFPLRGKLLNVREA+  Q+  N+
Sbjct: 426  EAGGKNSINCTLILTEGDSAKSLAVSGLGVIGRDHYGVFPLRGKLLNVREANYKQLSENA 485

Query: 497  EIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            E+ N+ KI+GL+   +Y   +++K+LRYG +MIMTDQ                       
Sbjct: 486  EVNNLCKIIGLQYKKKYLTEDDLKTLRYGKVMIMTDQ----------------------- 522

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
                 D DGSHIKGLLINFIH+ WP LL++P FL EFITPIVKAT KN + LSFYS+P++
Sbjct: 523  -----DQDGSHIKGLLINFIHTNWPELLRLP-FLEEFITPIVKATKKNEE-LSFYSLPEF 575

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
            E WK     N  +++IKYYKGLGTSTSKE KEYFQ++  H+  F ++   D E+I +AFS
Sbjct: 576  EEWKNDTA-NHHTYNIKYYKGLGTSTSKEAKEYFQDMERHRILFKYDGSVDDESIIMAFS 634

Query: 674  KKKIEARKKWLLQFEPGNHLDQ---------KEKY--------IKYSDFVNKELILFSMA 716
            KK IE+RK WL      NH+D+          E+Y        I Y+DF+N EL+LFS A
Sbjct: 635  KKHIESRKVWLT-----NHMDEVKRRKELGLPERYLYTKGTKSITYADFINLELVLFSNA 689

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D +RSIPS+VDGLKPGQRK++F  FKRN  +E KVAQ SG V+E SAYHHGE SL  TI+
Sbjct: 690  DNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIV 749

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQ+FVG+NNINLL+P GQFGTR  GGKD ASARYIFT +SP+TR ++   DD LLDY 
Sbjct: 750  NLAQNFVGANNINLLEPRGQFGTRLTGGKDCASARYIFTLMSPLTRLIYHPLDDPLLDYQ 809

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +DGQ+IEP WY+PIIP VLVNG+EGIGTGWS+ I NYNPR+I+ N+R+++NG+    MH
Sbjct: 810  VDDGQKIEPLWYLPIIPMVLVNGAEGIGTGWSTKISNYNPREIMNNLRKMINGQEPVVMH 869

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIID 955
            PWY+ F G IE  +       Y  TG ++ ++   L I ELP+  WTQ+Y+E  LE++ +
Sbjct: 870  PWYKNFLGRIEYVSDGR----YIQTGNLQILHGNRLEISELPVGVWTQNYKENVLEALSN 925

Query: 956  QND---SFIRGFRQYSDDTTVDFEVFLS--EESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
              +   + +  +++Y  DTTV F +  +  E   +R ++ G  + FKLTTT+ST+ MH F
Sbjct: 926  GTEKVKAVVSEYKEYHTDTTVRFVISFAPGEFERIRAEEGGFHRVFKLTTTLSTNQMHAF 985

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    ++++ T   IL+EF+ +R E+Y +R+   +  L  +  +L ++ RFIL     ++
Sbjct: 986  DQNNCLRRFPTAIDILKEFYKLRREYYARRRDFLVGQLTAQADRLSDQARFILEKCEKKL 1045

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP------------------KNSKSIEAVVAGATDETEE 1112
            VV N++R  +  EL ++G+ P P                  ++ +  EA  + ++   +E
Sbjct: 1046 VVENKQRKAMCDELLKRGYRPDPVKEWQRRIKMEDAEQADEEDDEEEEAAPSVSSKAKKE 1105

Query: 1113 SEENPE-VVNGVQSI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLW 1170
             E +PE     +  +  +DYLL M++  LT E+   LL  RD    E+++LRK TPE LW
Sbjct: 1106 KEADPEKAFKKLTDVKKFDYLLGMSMWMLTEERKNELLKQRDTKLSELENLRKKTPEMLW 1165

Query: 1171 VKDLDALDMQLDELDKSDARAEEERMKIK 1199
            + DLDAL+ +L+E+++ + R EE+ + +K
Sbjct: 1166 LDDLDALESKLNEVEQKE-RVEEQGINLK 1193


>gi|327275489|ref|XP_003222506.1| PREDICTED: DNA topoisomerase 2-alpha-like [Anolis carolinensis]
          Length = 1559

 Score = 1165 bits (3014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1201 (51%), Positives = 809/1201 (67%), Gaps = 82/1201 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E+ TQ +W+++EE   +  R +++VPGLYKIFDE
Sbjct: 32   SVERIYQKKTQLEHILLRPDTYIGSVEQVTQQMWVFDEEI-GLNCRDVTFVPGLYKIFDE 90

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD KM  +K+ ID E++ +SV N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 91   ILVNAADNKQRDKKMSCIKITIDPENNTVSVWNNGKGIPVVEHKVEKVYVPALIFGQLLT 150

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K+++Q ++NNMGK  E  + 
Sbjct: 151  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACREYKKRFQQTWSNNMGKAGEMKL- 209

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T ++F+PDLAKF MT L+ D+VALM +R  D+AG     V V LNG+++PV+
Sbjct: 210  KYFDGEDFTCITFQPDLAKFKMTTLDKDIVALMSRRAYDIAGA-SNGVTVFLNGNKLPVR 268

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVD+Y K         +   HE VN RWE+C+T+SE  FQQVSFVN IAT KGG H
Sbjct: 269  GFRSYVDLYIKDKVDETGNLLKIIHEEVNSRWEVCLTMSEKGFQQVSFVNSIATTKGGRH 328

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+ N ++ VV ++NK    VK   VKNH+W+F+N LI+NP FDSQTKE +TL+ 
Sbjct: 329  VDYVADQIVNKLIDVVKRRNKGGVAVKPFQVKNHMWIFINCLIENPTFDSQTKENMTLQA 388

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K   +  GIVE +L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 389  KSFGSTCKLSEKFIKGAVS-CGIVENILNWVKFKAQNQLNKKCSAVKHTRIKGIPKLDDA 447

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG +NS  CTLILTEGDSAK LA++GL VVGRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 448  NDAGSKNSINCTLILTEGDSAKTLAVSGLGVVGRDRYGVFPLRGKMLNVREASHKQIMEN 507

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y++   +++LRYG +MIMTDQ                      
Sbjct: 508  AEINNIIKIVGLQYKKTYDDEESLRTLRYGKIMIMTDQ---------------------- 545

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + +SFYS+P+
Sbjct: 546  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKEEISFYSIPE 597

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N  +W  KYYKGLGTSTSKE KEYF  +T H+  F +   +D  AI LAF
Sbjct: 598  FEEWKSS-NSNYRNWKTKYYKGLGTSTSKEAKEYFAEMTRHRIPFKYSGPEDDAAITLAF 656

Query: 673  SKKKIEARKKWLLQFE-----------PGNHLDQKEK-YIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK+WL  F            P  +L  K   Y+ Y+DF+NKEL+LFS +D +R
Sbjct: 657  SKKKIDDRKEWLTSFMEDRRQRKLHGLPDVYLYGKSTTYLTYNDFINKELVLFSNSDNER 716

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS+VDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 717  SIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGETSLMMTIINLAQ 776

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R  FP  DD +L +L +D 
Sbjct: 777  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLAFPVLDDNVLKFLFDDN 836

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPNY+ R++V N+RR+L+G+   PM P Y+
Sbjct: 837  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNYDVREVVNNIRRMLDGDEPLPMMPNYK 896

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQNDS 959
             F GTI+     +    Y V G +  ++ TT+ I ELP+R WTQ Y+E  LE +++  + 
Sbjct: 897  NFKGTIDSVGQNQ----YVVNGEVSIIDSTTIEISELPVRTWTQVYKEQVLEPMLNGTEK 952

Query: 960  ---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +++Y  DTTV F + +SE+ +   +  GL K FKL ++++  NM LFD  G +
Sbjct: 953  TPPLITDYKEYHTDTTVRFVIKMSEQKLAEAEAAGLHKVFKLQSSLACPNMVLFDHIGCL 1012

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T E IL EF+ +RL +Y  RK   +  L  E  KL N+ RFIL  + G+IV+ N+ 
Sbjct: 1013 KKYETAEDILREFYELRLRYYSLRKDWLVGMLGAESAKLNNQARFILEKIEGKIVIENKP 1072

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDE-----TEESEENPEVVNGVQSIDYDYL 1131
            + +L+  L Q+G+   P   K  E+   G+ D+       E E  P+   G    D+ YL
Sbjct: 1073 KKELIKVLIQRGYDSDPV-KKWKESQQKGSDDDSNEEGESEKENEPDASTGP---DFGYL 1128

Query: 1132 LSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDL----DALDMQLDELDKS 1187
            L+M +  LT EK   L   RD    E++ L++ +P+ LW  DL    +ALD+Q +E +K 
Sbjct: 1129 LNMPLWYLTKEKKDELCKQRDDKETELETLKRKSPDDLWRHDLAVFVEALDIQ-EEKEKQ 1187

Query: 1188 D 1188
            D
Sbjct: 1188 D 1188


>gi|10121857|gb|AAG13401.1|AF285155_1 topoisomerase II alpha-2 [Gallus gallus]
          Length = 1586

 Score = 1165 bits (3014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 685/1528 (44%), Positives = 930/1528 (60%), Gaps = 156/1528 (10%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++E+   +  R +++VPGLYKIFDE
Sbjct: 30   SVERIYQKKTQLEHILLRPDTYIGSVETVTQQMWVFDEDV-GLNCRDVTFVPGLYKIFDE 88

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E++ ISV N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 89   ILVNAADNKQRDKSMSCIKVTIDPENNTISVWNNGKGIPVVEHKVEKVYVPALIFGQLLT 148

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ +T+NMGK  E  + 
Sbjct: 149  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACREYKKLFKQTWTDNMGKAGEMTL- 207

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +G+++T V+F+PDL+KF MT L+ D+VALM +R  D+AG   K VKV LNG R+PVK
Sbjct: 208  KHFDGEDYTCVTFQPDLSKFKMTILDKDIVALMSRRAYDIAGST-KDVKVFLNGKRLPVK 266

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIK---- 313
             F  YVD+Y K        ++   HE VN RWE+C+TLSE  FQQVSFVN IAT K    
Sbjct: 267  GFRSYVDLYLKDKVDETGNALKVIHEEVNSRWEVCLTLSEKGFQQVSFVNSIATTKVILS 326

Query: 314  -------------------------------GGTHVDYVANQVANHVMAVVNKKNKNA-N 341
                                           GG HVDYVA+Q+   ++ VV KKNKN   
Sbjct: 327  SCSHIHFIFFLLALCFVSLETPRALWSHFPLGGRHVDYVADQIVTKLIDVVKKKNKNGVG 386

Query: 342  VKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVE 401
            VK   VKNH+W+FVN+LI+NP FDSQTKE +TL+  SFGS C+LSE+F+K      GIVE
Sbjct: 387  VKPFQVKNHMWIFVNSLIENPTFDSQTKENMTLQAKSFGSTCKLSEKFIKGAVG-CGIVE 445

Query: 402  TLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALA 460
            ++L+W  FK    L KK    K   ++G+ KL+DAN AG +NS  CTLILTEGDSAK LA
Sbjct: 446  SILNWVKFKAQTQLNKKCSAVKHTKIKGVPKLDDANDAGSKNSIDCTLILTEGDSAKTLA 505

Query: 461  MAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNN---VK 517
            ++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N+EI NI KI+GL+    Y +   +K
Sbjct: 506  VSGLGVVGRDKYGVFPLRGKMLNVREASHKQIMENAEINNIIKIVGLQYKKNYEDRESLK 565

Query: 518  SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFW 577
            SLRYG +MIMTDQ                            D DGSHIKGLLINFIH  W
Sbjct: 566  SLRYGKIMIMTDQ----------------------------DQDGSHIKGLLINFIHHNW 597

Query: 578  PSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGT 637
            PSLL+  +FL EFITPI+K + KN + + FYS+P++E WK S   N +SW IKYYKGLGT
Sbjct: 598  PSLLR-HNFLEEFITPIIKVS-KNKEEIPFYSIPEFEEWKSSTQ-NYNSWKIKYYKGLGT 654

Query: 638  STSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE--------- 688
            STSKE KEYF ++  H+  F +   +D  AI LAFSKKK+E RK+WL  F          
Sbjct: 655  STSKEAKEYFADMARHRIGFKYSGPEDDAAITLAFSKKKVEERKEWLTNFMEDRRQRNVH 714

Query: 689  --PGNHLDQKE-KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNF 745
              P ++L  K+  Y+ Y+DF+NKEL+LFS +D +RSIPS+VDGLKPGQRK+LF  FKRN 
Sbjct: 715  GLPEDYLYGKDTNYLTYNDFINKELVLFSNSDNERSIPSLVDGLKPGQRKVLFTCFKRND 774

Query: 746  IKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGK 805
             +E K AQ +G V+E S+YHHGE SL  TI+ +AQ+FVGSNN+NLLQP GQFGTR  GGK
Sbjct: 775  KREVKGAQLAGSVAEMSSYHHGEASLMMTIINLAQNFVGSNNLNLLQPIGQFGTRLHGGK 834

Query: 806  DAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGT 865
            D+AS RYIFT LSP+ R LFP  DD +L +L +D Q++EP WYMPIIP VL+NG+EGIGT
Sbjct: 835  DSASPRYIFTMLSPLARLLFPPVDDNVLRFLYDDNQRVEPEWYMPIIPMVLINGAEGIGT 894

Query: 866  GWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIE 925
            GWS  IPN++ R+ V N+R LL+G+   PM P Y+ F GTI++    +    Y ++G + 
Sbjct: 895  GWSCKIPNFDIRETVNNIRCLLDGKEPLPMLPSYKNFKGTIDELGPNQ----YVISGEVS 950

Query: 926  EVNETTLRIKELPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSE 981
             ++ TT+ I ELP+R WTQ Y+E  LE ++   ++    I  +++Y  DTTV F V +SE
Sbjct: 951  ILDSTTIEITELPVRTWTQTYKEQVLEPMLNGTEKTPPLITDYKEYHTDTTVKFVVKMSE 1010

Query: 982  ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
            E +   +  GL K FKL T ++ ++M LFD  G +KKY++P+ IL+EFF +RL +Y  RK
Sbjct: 1011 EKLAEAEAVGLHKVFKLQTNLTCNSMVLFDHVGFLKKYESPQDILKEFFELRLRYYGLRK 1070

Query: 1042 KVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA 1101
            +  +  L  E  KL N+ RFIL  ++G+IV+ N+ + +L+  L Q+G+      S  ++A
Sbjct: 1071 EWLIGMLGAESAKLNNQARFILEKIDGKIVIENKPKKELIQVLIQRGY-----ESDPVKA 1125

Query: 1102 VVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
                   E EE +E+ E        D++YLL+M +  LT EK   L   RD  ++E++DL
Sbjct: 1126 WKELQNKEEEEGDESGEESAAATGPDFNYLLNMPLWYLTKEKKDELCKQRDNKDKELEDL 1185

Query: 1162 RKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARK 1221
            +  +P  LW +DL A    ++ELD  +A+  ++ M       G  G  +  K   +  ++
Sbjct: 1186 KHKSPSDLWKEDLAAF---VEELDAVEAKQMQDEMA------GITGKPLKVKGGKQGGKQ 1236

Query: 1222 NDKKSNNAR---ATEAMGEMDNVTKVVKPKGRAGLKKA-PAEKLDDDE--------EDEV 1269
               K+  A    +   +  +  VT  +K +    +KK   +EK + DE        + E 
Sbjct: 1237 KVTKAQLAEVMPSPHGIRVVPRVTAEMKAEAEKRIKKKIKSEKNESDEKQEGNSSGDKEP 1296

Query: 1270 PDLKQRLAKLNEQLASTKLE--------------PSPDQSGVMETEKVQVPAKKKEPSKR 1315
              LKQRLA+  +    TK +              P  D     E++  +VP+K++   ++
Sbjct: 1297 SSLKQRLAQKRKAEQGTKRQTTLPFKPIKKMKRNPWSDSESDSESDDFEVPSKRERVVRQ 1356

Query: 1316 TAAQKKVVTVETSDSEDEIIIDDDEAFEIAAPEEGKKGGRKAAGNSKAAKPAAETKKRGP 1375
             AA+ K +    SD++   +   DE  E     EG       +        A   +K+G 
Sbjct: 1357 AAAKIKPMVNSDSDAD---LTSSDEDSEYQENSEGNTDSDTTSKKKPPKAKAVPKEKKGK 1413

Query: 1376 AKKQQPEASL----GQRLLTEMLKPAESSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPS 1431
            A K++P         Q +  E      ++P   V + +A P  K + +  G      +PS
Sbjct: 1414 APKEKPLPDAVPVRVQNVAAESASQDPAAPPVSVPRAQAVP-KKPAAAKKGSTAKDNQPS 1472

Query: 1432 GSSPSTSEEVAEVLPPKARPQRANRRQA 1459
                 T ++ A    PKA P+RA R ++
Sbjct: 1473 IMDILTKKKAA----PKA-PRRAQREES 1495


>gi|383409263|gb|AFH27845.1| DNA topoisomerase 2-alpha [Macaca mulatta]
          Length = 1531

 Score = 1165 bits (3014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 619/1204 (51%), Positives = 822/1204 (68%), Gaps = 79/1204 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKLDETGNPLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS  CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGGRNSTDCTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKMLNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NYKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRL++GE   PM P Y+
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLMDGEEPLPMLPSYK 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 894  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 949

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 950  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 1010 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  +      +D  +E+E++  V +   +  ++Y
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTDSGPT--FNY 1127

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R++  +E+D L++ +P  LW +DL      ++EL+  +A+
Sbjct: 1128 LLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATF---IEELEAVEAK 1184

Query: 1191 AEEE 1194
             +++
Sbjct: 1185 EKQD 1188


>gi|345490822|ref|XP_001601580.2| PREDICTED: DNA topoisomerase 2-like [Nasonia vitripennis]
          Length = 1512

 Score = 1165 bits (3013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1214 (50%), Positives = 820/1214 (67%), Gaps = 88/1214 (7%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            TIE MYQKK+QLEHILLRPDTYIGS+E  T+ +WIY++E + MI + I YVPGLYKIFDE
Sbjct: 21   TIEGMYQKKTQLEHILLRPDTYIGSVEPVTELMWIYDKEKEMMIQKEIKYVPGLYKIFDE 80

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKMD++K+ ID E++ ISV N+G G+PV IH+EE +YVP +IFGHLLT
Sbjct: 81   ILVNAADNKQRDPKMDSIKIDIDAENNTISVWNNGKGIPVVIHKEENMYVPTMIFGHLLT 140

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD  +K TGGRNGYGAKL NIFS  F +ETA  +  K  KQ + NNMGK SE  I 
Sbjct: 141  SSNYDDAEEKVTGGRNGYGAKLCNIFSHRFTVETACKEYKKSLKQTWGNNMGKASEAKIK 200

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            +   G+++TKV+F PDL+KF M  L++DVVALM +R  D+A    + VKV LNG RVPVK
Sbjct: 201  EF-HGEDFTKVTFSPDLSKFKMEKLDEDVVALMSRRAYDIAAS-SRGVKVFLNGTRVPVK 258

Query: 266  SFAEYVDMY----------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGG 315
            SF +YVD+Y          P  +T  +E    RWE+ +TLS+  FQQ+SFVN IAT KGG
Sbjct: 259  SFKDYVDLYIKGKEDDTGNPLKIT--YENCGPRWEVAITLSDKGFQQMSFVNSIATTKGG 316

Query: 316  THVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
             HVD+V + V   ++  + KKNK    +K   +KNHLWVF+N LI+NP FDSQTKE +TL
Sbjct: 317  RHVDHVTDMVVKQLIETLKKKNKAGVQIKPFQIKNHLWVFINCLINNPTFDSQTKENMTL 376

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK-NDGTKTEDVRGISKLE 433
            +Q SFGSKC LSE+F+  VT KSGIVE++LSWA FK    L+K    +K   ++GI KLE
Sbjct: 377  QQKSFGSKCTLSEKFITNVT-KSGIVESVLSWAKFKADSQLQKLGPKSKQRKLQGIPKLE 435

Query: 434  DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            DAN AG   S  CTLILTEGDSAK++A++G++ +GRD++GVFPL+GK+LNVREA+  Q+L
Sbjct: 436  DANDAGTARSLDCTLILTEGDSAKSMAVSGIASIGRDKYGVFPLKGKILNVREATHKQIL 495

Query: 494  NNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
             N+EI N+ KILGL+   +Y   +++K+LRYG +MIMTDQ                    
Sbjct: 496  ENAEINNLIKILGLQYKKKYETRDDLKTLRYGKIMIMTDQ-------------------- 535

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                    D DGSHIKGLLINFIH  WPSLLK+ +F+ EFITPIVKA  K   VLSF+S+
Sbjct: 536  --------DQDGSHIKGLLINFIHHNWPSLLKL-NFIEEFITPIVKA-RKGNHVLSFFSL 585

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P++EAWK+    N  ++ IKYYKGLGTST++E KEYF+N+  H+  F ++ D D + I +
Sbjct: 586  PEFEAWKKETE-NFHTYKIKYYKGLGTSTAQEAKEYFENMARHRIRFRYDGDVDDQNIIM 644

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQK---------EKY--------IKYSDFVNKELILF 713
            AFSKK ++ RK WL      NH+++          E+Y        + +SDF+N EL+LF
Sbjct: 645  AFSKKCVDQRKDWLT-----NHMEETKRRKEIGLGERYLYEKDTRAVSFSDFINVELVLF 699

Query: 714  SMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAS 773
            S  D  RSIP+M+DGLKPGQRK+LF  FKRN  +E KVAQ    V+EHSAYHHGE SL +
Sbjct: 700  SNYDNIRSIPNMMDGLKPGQRKVLFTCFKRNDKREVKVAQLGASVAEHSAYHHGEMSLMA 759

Query: 774  TILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLL 833
            TI+ +AQ+FVGSNNINLLQP GQFGTR  GGKD+AS RYIFT LSP+ R++F K DD LL
Sbjct: 760  TIVNLAQNFVGSNNINLLQPIGQFGTRLAGGKDSASPRYIFTMLSPLARYIFHKHDDPLL 819

Query: 834  DYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMME 893
             +  +D Q+IEPT+Y+PIIP VLVNG++GIGTGW + IPNYNPR+I+ N++R+++G    
Sbjct: 820  KHEYDDNQKIEPTYYVPIIPMVLVNGADGIGTGWMTKIPNYNPREIIENLQRMMDGADPR 879

Query: 894  PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLES 952
            PM P+Y+ F GTIE          Y ++G I  +    + I ELPI  WTQ Y+E  LE 
Sbjct: 880  PMSPFYKNFKGTIESCGD----YRYVISGEISIIGPDKVEITELPIGTWTQAYKETVLEP 935

Query: 953  II---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHL 1009
            ++   D+    I  +++Y+ DT V F V L  + +   +++GL K FKL TT S ++M  
Sbjct: 936  MLHGSDKTPPVITDYKEYNTDTMVHFVVTLQRDKLAELERDGLHKAFKLQTTTSITSMCA 995

Query: 1010 FDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGE 1069
            FD    +KK+D   QI+  FF +RL+ Y+KRK      L+ E  KL N+ RFI+   +G 
Sbjct: 996  FDDNLCLKKFDNVCQIMRTFFTVRLDLYQKRKDYLEGILQAESAKLSNQSRFIMEKCDGT 1055

Query: 1070 IVVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEESEENPEVVNGVQS 1125
            + + N+K+ D++ EL ++G+   P    K +++ E V+    +  ++      VV  V+ 
Sbjct: 1056 LTIENKKKKDMIAELVRRGYDSDPVVAWKLAQNREEVLEEVAENEDDEASTSAVV--VEK 1113

Query: 1126 IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELD 1185
             ++DYLL M + +LT EK   LL  RD+   E+  L+  TP SLW +DLD L  +L++++
Sbjct: 1114 ENFDYLLGMTMWSLTKEKKDELLKQRDEKLAELHRLQARTPLSLWKEDLDNLLTELNKIE 1173

Query: 1186 KSDARAEEERMKIK 1199
            + + R +E + ++K
Sbjct: 1174 EKE-RKDEAKSRVK 1186


>gi|321457974|gb|EFX69050.1| hypothetical protein DAPPUDRAFT_329527 [Daphnia pulex]
          Length = 1572

 Score = 1164 bits (3010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 625/1205 (51%), Positives = 807/1205 (66%), Gaps = 81/1205 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKKSQLEHILLRPDTYIGS+E     +W+YEE++  MI R I+YVPGLYKIFDE
Sbjct: 40   SVERIYQKKSQLEHILLRPDTYIGSVEPVKDVMWVYEEDA-GMIQREITYVPGLYKIFDE 98

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNK RDPKMD +KV ID + ++I+++N+G G+PV  H+EE +YVP LIFGHLLT
Sbjct: 99   ILVNAADNKVRDPKMDTIKVDIDPKENVITIYNNGKGIPVVEHKEEKMYVPSLIFGHLLT 158

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D  +K TGGRNGYGAKL NIFST F +ETA     KK+KQ +T+NM K   P I 
Sbjct: 159  SSNYNDEEEKVTGGRNGYGAKLCNIFSTSFELETASKDERKKFKQTWTDNMTKAGTPKIV 218

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
               E D +T+++F PDLAKF M  L+ D VAL+ +R  D+A    + VKV LNG R+P+K
Sbjct: 219  NYNEAD-FTQITFSPDLAKFKMDSLDKDTVALLSRRAFDVAAST-RGVKVFLNGKRLPIK 276

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            +F +YVD+  K         +   +E V+ERWEI V  S+  FQQVSF N IAT KGG H
Sbjct: 277  NFKDYVDLCLKGKEDDDGAQLKCVYEAVSERWEIAVAPSDKGFQQVSFANSIATTKGGRH 336

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYV   V+ ++   + KKNK+  NVK H +KNHLW+FVN LI NP FDSQTKE +TL+ 
Sbjct: 337  VDYVTEIVSKYLQEFLKKKNKSGINVKPHQIKNHLWIFVNCLIVNPTFDSQTKENMTLQA 396

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK-NDGTKTEDVRGISKLEDA 435
             SFGS C+ SE+F   +  KSG++E +++WA FK   +L K   G K   ++G+ KLEDA
Sbjct: 397  KSFGSTCKPSEKFFNALN-KSGVIEGVMTWAKFKAQTELNKACSGKKQTKLKGVPKLEDA 455

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG ++S  CTLILTEGDSAK+LA++GL VVGRD++GVFPL+GK+LNVREA+  Q+L N
Sbjct: 456  NNAGTKHSIDCTLILTEGDSAKSLAVSGLGVVGRDKYGVFPLKGKVLNVREATHKQILEN 515

Query: 496  SEIGNIKKILGLKQGVEYNNV---KSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI N+ KILGL+   +Y +V   KSLRYG LMIMTDQ                      
Sbjct: 516  AEINNLIKILGLQYKKKYESVEDLKSLRYGRLMIMTDQ---------------------- 553

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG---KVLSFYS 609
                  D DGSHIKGLLINF+H  WPSLL++P FL EFITPIVKAT   G   K LSFYS
Sbjct: 554  ------DQDGSHIKGLLINFLHHNWPSLLRLP-FLEEFITPIVKATKGTGASAKSLSFYS 606

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            +P++E WK +   N  ++ IKYYKGLGTSTS+E K YF ++  H+  F  + DQD  AI 
Sbjct: 607  LPEFEEWKTNTE-NWPTYRIKYYKGLGTSTSQEAKGYFSDMQRHRILFHHDGDQDDYAIL 665

Query: 670  LAFSKKKIEARKKWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKELILFSMAD 717
            +AFSKK +E RK+WL  +            P  +L +K+ K + Y DFVNKEL+LFS  D
Sbjct: 666  MAFSKKHVEQRKEWLTSWMEECKRRRELGLPELYLYEKDTKRVSYRDFVNKELVLFSNMD 725

Query: 718  LQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
             +RSIPS++DG KPGQRK+LF   KRN  KE KVAQ +G V+EHSAYHHGE SL  TI+G
Sbjct: 726  NERSIPSLMDGFKPGQRKVLFTCIKRNDKKEIKVAQLAGSVAEHSAYHHGEASLMGTIIG 785

Query: 778  MAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLN 837
            +AQDFVGSNNINLL PNGQFGTR QGGKDAAS RYIFT +S +TR +F   DD LL +  
Sbjct: 786  LAQDFVGSNNINLLLPNGQFGTRLQGGKDAASPRYIFTLMSKLTRIIFHPHDDPLLKHQM 845

Query: 838  EDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHP 897
            +D Q+IEP +Y PIIP +LVNG++GIGTGW + I NYNPR++VANV+R+L+GE   PM P
Sbjct: 846  DDNQRIEPEYYAPIIPMILVNGTDGIGTGWMTKILNYNPREVVANVKRMLDGEEPIPMDP 905

Query: 898  WYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQ 956
            W++G+ GTIE+         Y ++G +  ++ T + I ELP+R WTQ+Y+E  +E+++  
Sbjct: 906  WFKGYRGTIERIDRHR----YAISGELAVLSGTEMEITELPLRVWTQNYKESVMETLLHG 961

Query: 957  NDS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
            ++     I  +++Y  DTTV F V +SEE M + + EGL K FKL TT S ++M L+DS 
Sbjct: 962  SEKIPPLITDYKEYHTDTTVRFIVTMSEEKMQQAEAEGLHKAFKLQTTHSLTSMVLYDSN 1021

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G +K YDT E IL+EFF +RL +Y KRK      L+ E  +L N+ RFI    +  ++V 
Sbjct: 1022 GCLKMYDTVEDILKEFFTVRLGYYGKRKDYLSGVLQAESQRLSNQARFICEKCDNVLIVE 1081

Query: 1074 NRKRTDLLLELRQKGFTPFP-----KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDY 1128
            N+K   L+ ELR++ + P P     KN K+         +E     E   V  G    DY
Sbjct: 1082 NKKAKVLVEELRRRNYDPDPVRIWKKNQKNNVNAENEEEEEANAENEEGAVKIG----DY 1137

Query: 1129 DYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSD 1188
            DYLL M + +LT EK + LL  RD   +E D L K +P  LW +DLD   + L E++  D
Sbjct: 1138 DYLLDMPMRSLTYEKKEELLKKRDVKMKEYDILLKKSPADLWREDLDHFMVVLKEVE--D 1195

Query: 1189 ARAEE 1193
            A  EE
Sbjct: 1196 AEQEE 1200


>gi|322786140|gb|EFZ12747.1| hypothetical protein SINV_05088 [Solenopsis invicta]
          Length = 1518

 Score = 1163 bits (3009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 602/1197 (50%), Positives = 810/1197 (67%), Gaps = 84/1197 (7%)

Query: 24   NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
            +KTIE +YQKKSQLEHILLRPDTYIGS+E  T+ +W++++E + M+ + I YVPGLYKIF
Sbjct: 24   SKTIEGIYQKKSQLEHILLRPDTYIGSVEPVTEMMWVFDKEKEMMVQKEIKYVPGLYKIF 83

Query: 84   DEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            DEILVNAADNKQRDPKMD +K+ ID E++ ISV N+G G+PV IH+EE +YVP +IFGHL
Sbjct: 84   DEILVNAADNKQRDPKMDMIKIDIDSENNTISVWNNGKGIPVVIHKEENMYVPTMIFGHL 143

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LTSSNYDD  +K TGGRNGYGAKL NIFS  F +ETA  +  K  KQ + NNMGK SEP 
Sbjct: 144  LTSSNYDDEEEKVTGGRNGYGAKLCNIFSHRFTVETATKEYKKSLKQTWGNNMGKASEPR 203

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            I K   G+++TKV+F PDL KF M  L+DD+V+LM +R  D+A    K VKV LNGHR+P
Sbjct: 204  I-KEYYGEDFTKVTFSPDLTKFKMQSLDDDIVSLMSRRAYDVAAS-SKGVKVYLNGHRIP 261

Query: 264  VKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGG 315
            VK+F +YVD Y K         +   +E    RWE+ +TLS+  FQQ+SFVN IAT KGG
Sbjct: 262  VKNFKDYVDCYIKGKEDDVGNPLKVVYENCGPRWEVALTLSDKGFQQMSFVNSIATTKGG 321

Query: 316  THVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
             HVD+V   +   ++  + KKNK    +K   +KNHLW+FVN LI+NP FDSQTKE +TL
Sbjct: 322  RHVDHVTELIVKQLIETLKKKNKAGITIKPFQIKNHLWIFVNCLINNPTFDSQTKENMTL 381

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK-NDGTKTEDVRGISKLE 433
            +Q SFGSKC L+++F+  +T K G+VE +LSWA FK    L+K    +K   + GI KLE
Sbjct: 382  QQKSFGSKCALTDKFITSIT-KIGVVEAVLSWAKFKADSQLEKLGPKSKQRKLHGIPKLE 440

Query: 434  DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            DAN AG   S +CTLILTEGDSAK +A++G++ +GRD++G+FPLRGK+LNVREA+  Q+L
Sbjct: 441  DANDAGTARSLECTLILTEGDSAKTMAVSGIASIGRDKYGIFPLRGKMLNVREATHKQIL 500

Query: 494  NNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
             N+EI N+ KILGL+   +Y   +++K+LRYG +MIMTDQ                    
Sbjct: 501  ENAEINNLIKILGLQYKKKYETRDDLKTLRYGKMMIMTDQ-------------------- 540

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                    D DGSHIKGLLINFIH  WPSLLK+ +F+ EFITPIVKAT K  +VLSF+S+
Sbjct: 541  --------DQDGSHIKGLLINFIHHNWPSLLKL-NFIEEFITPIVKAT-KGSQVLSFFSL 590

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P++E WK+    N  ++ IKYYKGLGTST+KE KEYF+N+T H+  F ++  QD + I +
Sbjct: 591  PEFEMWKKETE-NFHTYKIKYYKGLGTSTAKEAKEYFENMTRHRIRFRYDGTQDDQNIIM 649

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQK---------EKY--------IKYSDFVNKELILF 713
            AFSKK ++ RK WL+     NH+++          E+Y        + +SDF+N EL+L+
Sbjct: 650  AFSKKCVDQRKDWLM-----NHMNETKRRKEIGLGERYLYEKDTRTVSFSDFINVELVLY 704

Query: 714  SMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAS 773
            S  D  RSIP+++DGLKPGQRK+LF   KRN  +E KVAQ +G V+EHSAYHHGE SL +
Sbjct: 705  SNYDNVRSIPNLMDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEHSAYHHGETSLMA 764

Query: 774  TILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLL 833
            TI+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LSP+ R++F K DD LL
Sbjct: 765  TIINLAQNFVGSNNINLLQPIGQFGTRLAGGKDAASPRYIFTMLSPLARYIFHKHDDALL 824

Query: 834  DYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMME 893
             +  +D Q+IEP +Y P+IP VLVNG++GIGTGW + IPNYNPR+I+ N+ R+++G   +
Sbjct: 825  RHEYDDNQKIEPVFYTPVIPMVLVNGADGIGTGWMTKIPNYNPREIIENLHRMMDGADPK 884

Query: 894  PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLES 952
            PM P+Y+ F G++E          Y ++G I  +    + I ELPI  WTQ Y+E  LE 
Sbjct: 885  PMIPYYKNFKGSVESCGE----YRYVISGEISVIGPDKVEITELPIGTWTQTYKETVLEP 940

Query: 953  II---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHL 1009
            ++   D+  + I  +++Y+ DT V F V ++ + ++  +++GL K FKL TT S ++M  
Sbjct: 941  MLHGSDKTPAIITDYKEYNTDTAVHFIVIMNRDKLVELERDGLHKAFKLQTTTSITSMCA 1000

Query: 1010 FDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGE 1069
            FD    + KYD   QIL+ F+ +RL+ Y KRK      L+ E  KL N+ RFI+   +G 
Sbjct: 1001 FDENQCLNKYDNVVQILKLFYKVRLDMYHKRKDYLEGILQAEAAKLSNQARFIIEKCDGT 1060

Query: 1070 IVVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEESEENPEVVNGVQS 1125
            +VV N+K+ D++ EL ++ +   P    K S++ E V+    +  EES    +V   ++ 
Sbjct: 1061 LVVENKKKKDMITELIRRNYETDPVVAWKMSQNREQVLEEVVENDEESAPTTDV---IER 1117

Query: 1126 IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
             ++DYLL M + +LT EK   LL  RD+   E+  L+  TP SLW +DLD+L  +L+
Sbjct: 1118 ENFDYLLGMTMWSLTKEKKDDLLRQRDEKIAELKRLQARTPMSLWKEDLDSLLAELN 1174


>gi|391341933|ref|XP_003745280.1| PREDICTED: DNA topoisomerase 2-alpha-like [Metaseiulus occidentalis]
          Length = 1411

 Score = 1162 bits (3007), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1196 (51%), Positives = 804/1196 (67%), Gaps = 78/1196 (6%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEI 86
            +E++YQKK+QLEHILLRPDTYIGS+E+ TQ +W+Y+     M++R I+YVPGLYKIFDEI
Sbjct: 6    VEKIYQKKTQLEHILLRPDTYIGSVEQDTQKIWVYDGPEHGMVYREITYVPGLYKIFDEI 65

Query: 87   LVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
            LVNAADNKQRD   + +KV ID    +IS++N+G G+PV +H+EE  YVP LIFGHLLTS
Sbjct: 66   LVNAADNKQRDKSQNMIKVDIDPVKGMISIYNNGKGIPVVMHKEEKCYVPTLIFGHLLTS 125

Query: 147  SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            SNY+D+ KK TGGRNGYGAKL NIFST+F +ET+     K +KQ ++NNM    E  I +
Sbjct: 126  SNYNDDEKKVTGGRNGYGAKLCNIFSTKFTLETSSKADKKAFKQSWSNNMTVTGEAKIVE 185

Query: 207  CKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
              +  ++TKV+F PDL KFNM  L+ D VAL  +R  D+AGC    VKV+LNG  +PVK+
Sbjct: 186  SSQ--DYTKVTFYPDLKKFNMKELDKDFVALASRRAYDVAGCT-PGVKVQLNGELLPVKN 242

Query: 267  FAEYVDMYP---------KSVTRFHERVNERWEI-CVTLSEGQFQQVSFVNGIATIKGGT 316
            F +YV+++          K +T  HE V+ RWE+ C    EG+F+Q+SFVN IAT KGG+
Sbjct: 243  FLDYVNLFTSKCTNEDEDKPLTVVHEIVSSRWEVACCPAPEGEFKQMSFVNNIATTKGGS 302

Query: 317  HVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HV+YV + ++  +   V KKNK   N+    +++H+W+FVN LI+NP FDSQTKE +TL+
Sbjct: 303  HVEYVVDAISKRLTDQVKKKNKQGVNITKKQIRDHMWIFVNCLIENPTFDSQTKENMTLQ 362

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
               FGS C++S++F   V  KSGI+++++ + +FK  K++ KK   TK   ++GI KLED
Sbjct: 363  VKKFGSTCDMSDKFFNGVL-KSGIIDSIMMFVHFKAQKEMNKKCSKTKHAKLKGIPKLED 421

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG   S  CTLILTEGDSAK LA++GL V+GRDR+GVFPLRGKLLNVREA++ Q+L 
Sbjct: 422  ANDAGTSRSIDCTLILTEGDSAKTLAVSGLGVIGRDRYGVFPLRGKLLNVREATTKQLLE 481

Query: 495  NSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+   +Y    +++SLRYG +MIMTDQ                     
Sbjct: 482  NAEINNIIKIVGLQYKKKYEAPEDMRSLRYGKIMIMTDQ--------------------- 520

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLL++ +FL EFITPIVK   K     SF+S+P
Sbjct: 521  -------DQDGSHIKGLLINFIHHNWPSLLQM-NFLEEFITPIVKVF-KGSNEQSFFSLP 571

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            ++E WK +   N  SW +KYYKGLGTST+KE KEYF N+  H   F +   +D  +I LA
Sbjct: 572  EFEEWKVATP-NWESWRVKYYKGLGTSTAKEAKEYFSNMGRHLIAFKYTGAEDDSSITLA 630

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKELILFSMADLQ 719
            FSKK +E RK WL               P  +L  K+ K + YSDFV+KELILFS  D +
Sbjct: 631  FSKKMVEERKTWLTNGMKERKDRRELGMPEIYLYNKDTKKVSYSDFVHKELILFSNMDNE 690

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDGLKPGQRK+LF   KRN  +E KVAQ +G V+E S+YHHGEQSL  TI+ +A
Sbjct: 691  RSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSSYHHGEQSLMMTIINLA 750

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            QDFVGSNNINLLQP GQFGTR QGGKD+AS RYIFT+LSP+ R LF  DDD +LDYL +D
Sbjct: 751  QDFVGSNNINLLQPIGQFGTRLQGGKDSASPRYIFTKLSPLARNLFHADDDAVLDYLYDD 810

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q+IEP +Y+PIIP VLVNG+EGIGTGWS+ IPNYNPRD+V NVRRLL G+  + M PWY
Sbjct: 811  NQKIEPNYYLPIIPMVLVNGAEGIGTGWSTKIPNYNPRDVVENVRRLLKGQPPKKMTPWY 870

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQND 958
            +GF G I    + ++G    V G I  ++   ++I ELPI+ WTQ ++E  LES++  +D
Sbjct: 871  KGFEGEI---VALDSGSRIVVHGEISTLSNNRVQITELPIKVWTQAFKENVLESLLHGSD 927

Query: 959  ---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
                 I  +R+Y+ DT V+F V +    M + + EGL K FKL TT++T+ M LFD+ G 
Sbjct: 928  KVPGLITDYREYNTDTKVNFVVQMDSAQMAKAQSEGLHKVFKLQTTLATTCMVLFDAAGC 987

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            I+ Y +PE+ILEEFF +RL+ Y +R+   L  L  E  KL N+ RFI+     +I V N+
Sbjct: 988  IRFYQSPEEILEEFFTVRLDGYVRRRNFLLGMLGAEACKLTNQARFIVEKCEDKIRVENK 1047

Query: 1076 KRTDLLLELRQKGFTPFP--------KNSKSIEAVVAGATDETEES-EENPEVVNGVQSI 1126
            K+  ++  L ++G+ P P        K+ +  EA      DE E S EE+    +  Q+ 
Sbjct: 1048 KKKVMIELLVERGYDPDPVLRWKESQKSEQEKEAEAGIEDDEAEGSREESQPRSDSNQTK 1107

Query: 1127 DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
            DYDYLLSM + +LT E+ + LL  RD    E+  L   TP+ LW +DLDA   +LD
Sbjct: 1108 DYDYLLSMTMWSLTFERKEELLKKRDNKITELKTLEGKTPKDLWNEDLDAFSAKLD 1163


>gi|238507856|ref|XP_002385129.1| DNA topoisomerase II [Aspergillus flavus NRRL3357]
 gi|220688648|gb|EED45000.1| DNA topoisomerase II [Aspergillus flavus NRRL3357]
          Length = 1717

 Score = 1161 bits (3003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 602/1165 (51%), Positives = 793/1165 (68%), Gaps = 73/1165 (6%)

Query: 35   SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
            +QLEHI+ RPDTYIGSIE+ +Q +W+Y  ES  M  R +SYVPGLYKIFDEI+VNAADNK
Sbjct: 125  TQLEHIIKRPDTYIGSIERTSQQMWVYSTESDGMEFREVSYVPGLYKIFDEIVVNAADNK 184

Query: 95   QRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVK 154
            Q D  MD ++V I +E   ISV N+G G+P+E+H +E +YVPELIFGHLLTSSNYDD  +
Sbjct: 185  QNDANMDEIRVTISRETGEISVWNNGRGIPIEMHAKEKIYVPELIFGHLLTSSNYDDTQQ 244

Query: 155  KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWT 214
            K TGGRNG+GAKL N+FSTEF IET D ++ KKYKQ +T+NM K  +  I+  K GD++T
Sbjct: 245  KVTGGRNGFGAKLCNVFSTEFSIETQDSRQKKKYKQTWTSNMTKMGKAKITDAK-GDDYT 303

Query: 215  KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY 274
            KV+FKPD AKF M  +++D  AL+K+RV DLAG     V V+LNG RVPV++F +Y++MY
Sbjct: 304  KVTFKPDYAKFGMDGMDNDFEALVKRRVYDLAGTA--KVAVKLNGSRVPVRNFKKYMEMY 361

Query: 275  PKSVTRFHERVNE---------------RWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
             K++ R  ER ++               RWE+   +S+G FQQVSFVN IAT  GGTHV+
Sbjct: 362  TKAIRR--ERGDDGPAAKDEIITCSPDPRWEVGFAVSDGSFQQVSFVNSIATTSGGTHVN 419

Query: 320  YVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            Y+A+Q+ + +   V KKNKN A +K   ++NH+++FVNA I NPAF SQTKE LT + S 
Sbjct: 420  YIADQICSKLADQVKKKNKNGATLKPAQIRNHIFIFVNAQIVNPAFTSQTKEQLTTKSSQ 479

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLA 438
            FGSKC L E+F KK+  K+ ++  +L +A  K  + LKK DG +   +    KL DAN A
Sbjct: 480  FGSKCVLEEDFYKKIL-KTDVMSNILHFAQQKADQMLKKTDGGRRARMNN-PKLTDANKA 537

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            G ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+A+  Q+  N+EI
Sbjct: 538  GTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDATFEQISKNAEI 597

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
             NIK  LGL+   EY + + LRYGHLMIMTDQ                            
Sbjct: 598  QNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ---------------------------- 629

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---ATNKN-GKVLSFYSMPDYE 614
            DHDGSHIKGLLINF+ + +PSLL+IP FL+EFITPI+K      KN  K  SF++MP+YE
Sbjct: 630  DHDGSHIKGLLINFLQAQFPSLLRIPEFLIEFITPIIKVWKGDPKNPTKQRSFFTMPEYE 689

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
            AWKE    +   W  KYYKGLGTST+++ + YF+++  H K+F    D +   IELAFSK
Sbjct: 690  AWKEE-HKHERGWEHKYYKGLGTSTTEDAQVYFRDLDRHLKEFHTMQDNEVGLIELAFSK 748

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            KK + RK+WL QF+PG  LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPGQR
Sbjct: 749  KKADERKEWLRQFKPGTFLDHSVSKISYTDFINKELILFSMADNVRSIPSVVDGLKPGQR 808

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+L+  F+RN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ FVGSNN+N L+P+
Sbjct: 809  KVLYTCFRRNLKKDMKVVELAGHVSGMTAYQHGDISLQQTIVGLAQSFVGSNNVNCLEPS 868

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            G FG+R QGG D ASARYI+TRLSP  R +F   DD LL Y  +DG++IEP  Y+P++P 
Sbjct: 869  GNFGSRLQGGSDCASARYIYTRLSPFARRVFHAHDDPLLTYNEDDGEKIEPEIYVPVVPM 928

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            +LVNG++GIGTGWSS IPNYNP DIV N++RL++GE   PM PW+RGF G +        
Sbjct: 929  ILVNGADGIGTGWSSSIPNYNPEDIVDNLKRLMDGEETRPMQPWFRGFTGEVTDV----G 984

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTT 972
            G  +  +GII+E  E  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  T 
Sbjct: 985  GDRFKFSGIIKETGEKEVEITELPIRTWTQDFKDKLEDIIKAEKTPSFIKDYKDYNTHTK 1044

Query: 973  VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
            +D      E++M     EGL +KFKL+ T++T+N+  FD +G I KY T + IL+EF+  
Sbjct: 1045 LD------EKNMKSALSEGLEEKFKLSKTVATTNLVAFDPEGRITKYATVDDILKEFYTY 1098

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            RL+FYEKRK+ QL  L+ EL KL N+ RF+  +++G++VV+ +K+  L+ EL+ KG+  F
Sbjct: 1099 RLKFYEKRKQYQLSQLQKELDKLSNQARFVQEIIDGKLVVSKKKKNVLVQELKDKGYKAF 1158

Query: 1093 PKNSKSIEAVVAGATDETEESEENPEVVNG--VQSIDYDYLLSMAIGTLTLEKVQGLLAD 1150
            PK +   EAV AG  +   E +++        V S  YDYLL MAI +LT E+V+ L   
Sbjct: 1159 PKVA---EAVKAGEEERVVEEDDDESDSQDTEVLSSAYDYLLGMAIWSLTQERVEKLRRQ 1215

Query: 1151 RDKLNEEVDDLRKATPESLWVKDLD 1175
              +   EVD L K + E +W +DLD
Sbjct: 1216 IGEKEVEVDALIKMSKEDIWKRDLD 1240


>gi|405962935|gb|EKC28563.1| DNA topoisomerase 2-beta [Crassostrea gigas]
          Length = 1665

 Score = 1160 bits (3000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1212 (50%), Positives = 813/1212 (67%), Gaps = 73/1212 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKKSQLEHILLRPDTYIGS+E  TQA+W+Y+ + + M+ R I++VPGLYKIFDE
Sbjct: 26   SIERIYQKKSQLEHILLRPDTYIGSVESVTQAMWVYDSDLEQMVQRDITFVPGLYKIFDE 85

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            I+VNAADNKQRDP M  +K+ ID E++ I V N+G G+PV  H+ E +YVP +IFGHLLT
Sbjct: 86   IIVNAADNKQRDPGMTTMKIDIDPENNKIKVWNNGRGIPVIEHKTEKMYVPTMIFGHLLT 145

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+FI+ET+  +  K +KQ + +NMGK  EP I+
Sbjct: 146  SSNYDDSQKKVTGGRNGYGAKLCNIFSTKFIVETSCKEYHKAFKQTWIDNMGKTKEPTIT 205

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
              K  D +T ++F PDL KF M  L  D+V L  +R  D+A    + VKV LNG R+PVK
Sbjct: 206  DAKNED-FTSITFFPDLQKFKMESLTKDMVDLFTRRAYDIAAS-SRGVKVFLNGKRLPVK 263

Query: 266  SFAEYVDMYPKSVTR--------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            +F +Y+++Y K  T          HE  NERWE+ VTLSE  FQQVSFVN IAT KGG H
Sbjct: 264  NFKDYINLYVKDKTDDNGQPLPVIHEAANERWEVAVTLSEKGFQQVSFVNSIATTKGGRH 323

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD V +QV   ++ VV KKNK    +K   VKNHLW+FVN LI+NP FDSQTKE++TL+ 
Sbjct: 324  VDNVTDQVVTKLIEVVKKKNKGGIAIKPFQVKNHLWIFVNCLIENPTFDSQTKESMTLQA 383

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
              FGSKC LSE+F+ +V +K GIV+ +LSW  FK    L KK   +KT  ++GI KL+DA
Sbjct: 384  KQFGSKCTLSEKFINQV-SKCGIVDNILSWMKFKAQTQLNKKLTSSKTSKMKGIPKLDDA 442

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG RNS  CTLILTEGDSAK+LA+AGL VVGRD++GVFPL+GK+LNVREA+  Q+++N
Sbjct: 443  NDAGTRNSRDCTLILTEGDSAKSLAVAGLGVVGRDKYGVFPLKGKVLNVREATHKQIMDN 502

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+   +YN+   +K+LRYG LMIMTDQ                      
Sbjct: 503  AEINNIIKIMGLQFKEKYNDPDTLKNLRYGKLMIMTDQ---------------------- 540

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINF+H FWP+LLK  + + EFITPIVK T K    LSFYS+P+
Sbjct: 541  ------DQDGSHIKGLLINFMHHFWPNLLKY-NVIEEFITPIVKVT-KGKTELSFYSLPE 592

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK     N  ++ +KYYKGLGTSTSKE KEYF ++  HK  F +   +D  AI LAF
Sbjct: 593  FEEWKRETE-NWHTYRVKYYKGLGTSTSKEAKEYFSDMERHKIPFKYTGAEDDAAINLAF 651

Query: 673  SKKKIEARKKWLLQFE-----------PGNHLDQK-EKYIKYSDFVNKELILFSMADLQR 720
            SKKKIE RK+WL  +            P N L  K  K I Y+DF+N+ELIL+S  D  R
Sbjct: 652  SKKKIEERKEWLTSWMEDRKRRSEMGLPENFLYGKGTKAITYNDFINRELILYSNMDNTR 711

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF   KRN  KE KVAQ +G V+E SAYHHGE SL +TI+ +AQ
Sbjct: 712  SIPSMVDGLKPGQRKVLFTCLKRNLTKELKVAQLAGSVAEMSAYHHGEASLMNTIINLAQ 771

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+N+LQP GQFGTR  GGKDAAS RYIFT LSP+ R LF  +DD LL    +D 
Sbjct: 772  NFVGSNNLNILQPIGQFGTRLHGGKDAASPRYIFTALSPLARMLFNVNDDPLLKSNFDDN 831

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
             +IEP WY PIIP VLVNG+EGIGTGWS+ +PNY+ R+I+AN++R+L+GE   PM P Y+
Sbjct: 832  LKIEPEWYCPIIPMVLVNGAEGIGTGWSTKLPNYDVREIIANIKRMLDGEDPLPMVPSYK 891

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII----DQ 956
             F GTIE+ +       +  +G +  +++ T+ I ELPIR WTQ+Y+E +  I+    ++
Sbjct: 892  NFKGTIEELSESR----FIASGEVAIIDDQTVEITELPIRTWTQNYKEDVLEIMLHGTEK 947

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
              S I  F++Y  D+TV F V ++ E +   +++GL K FKL + IST+ M LFD  G I
Sbjct: 948  MPSMITDFKEYHTDSTVKFVVKMTPEKLAAAEEQGLHKVFKLQSNISTNTMVLFDHNGCI 1007

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            ++Y+    +L E+F +RL  Y+KRK      L  E  +LEN  RFI+  ++G I + N+ 
Sbjct: 1008 RRYEDITDVLREYFDVRLSLYQKRKDYMEGLLTAEANRLENIARFIMEKIDGLITIENKP 1067

Query: 1077 RTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEVVNGVQ-SIDYDYLLSM 1134
            + +L+  L ++G+   P K  K ++A      D+ EE +++    +G     D++Y+L+ 
Sbjct: 1068 KKELIQMLVRRGYDSDPLKRWKELQAKDKEDADDNEEEDDDESTASGSSGGPDFNYILNN 1127

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
             +  LT EK   LL  RD+   E++ L+K + E LW+ DL+     L+EL++ +   E++
Sbjct: 1128 PLWCLTKEKKDALLKQRDEKKSELEALKKKSKEDLWMDDLEEFMQNLEELERKERDDEKQ 1187

Query: 1195 RM----KIKGNG 1202
             +    KIKG G
Sbjct: 1188 SLSKPVKIKGKG 1199


>gi|339241631|ref|XP_003376741.1| DNA topoisomerase 2-alpha [Trichinella spiralis]
 gi|316974528|gb|EFV58014.1| DNA topoisomerase 2-alpha [Trichinella spiralis]
          Length = 1357

 Score = 1159 bits (2998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/1348 (47%), Positives = 860/1348 (63%), Gaps = 119/1348 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            TIE +YQKKSQLEHIL+RPDTYIGSIE HT+ +W+++EE + M+ R ++YVPGLYKI+DE
Sbjct: 48   TIESIYQKKSQLEHILIRPDTYIGSIEPHTENMWVFDEEQQKMVIRELTYVPGLYKIYDE 107

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            I+VNAADNKQRDP M+ +K+ I+   + I V N+G G+PV  H+EE +YVPE+IFG LLT
Sbjct: 108  IVVNAADNKQRDPSMNCIKISINATKNEIMVWNNGKGIPVVEHKEEKMYVPEMIFGTLLT 167

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD  +K TGGRNGYGAKL NIFS  F++ET+  +  K +KQV+T NM    +P IS
Sbjct: 168  SSNYDDTERKVTGGRNGYGAKLCNIFSKRFVVETSCREYKKHFKQVWTKNMTATEKPVIS 227

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
             C + D +T V F PDL KF M  L+DD+VALM +R  D+AG   K VKV LNG R+PV 
Sbjct: 228  DCVDQD-FTCVRFIPDLDKFGMEKLDDDIVALMCRRAYDIAGST-KGVKVFLNGKRIPVL 285

Query: 266  SFAEYVDMYPKSVTR--------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F EYVD+Y K  T          +E+ + RWE+ V +S+  FQQVSF N IAT KGG H
Sbjct: 286  GFKEYVDLYLKDRTTDTGEPLKVVYEQPHPRWEVAVAVSDRGFQQVSFTNSIATTKGGRH 345

Query: 318  VDYVANQVANHVMAVVNKKNKNA--NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            VDYV + +   V+  V K+ K    NV+   VKNHLW+F+N LI+NP FDSQTKE +TL+
Sbjct: 346  VDYVCDGIVEKVIENVKKQTKKTGMNVRPFQVKNHLWLFINCLIENPTFDSQTKENMTLQ 405

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC LS++F  +V  K G++E++LSW  +K    L KK   TK   ++G+ KLED
Sbjct: 406  PKSFGSKCTLSDKFFSQVL-KCGVLESVLSWLQYKAQAQLDKKCHSTKHSKLKGVPKLED 464

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG +NS +CTLILTEGDSAK+LA+AG SVVGRD +GVFPL+GK+LNVREA+  Q++ 
Sbjct: 465  ANEAGTKNSHRCTLILTEGDSAKSLAVAGFSVVGRDFYGVFPLKGKVLNVREANYKQIME 524

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI N+ KI+GL+   +Y+    + SLRYG +MIM DQ                     
Sbjct: 525  NAEINNLIKIIGLQYKCKYDTSEQMNSLRYGRVMIMADQ--------------------- 563

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGL+INF H  WP+LL+  +F+ EFITPIVKAT K  + L F+S+P
Sbjct: 564  -------DQDGSHIKGLVINFFHHNWPNLLR-RNFIEEFITPIVKAT-KGREELQFFSIP 614

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
             Y  W+     N  +W +KYYKGLGTST+KE KEYF N+  H+  F +E   D +AIELA
Sbjct: 615  QYFQWRAETA-NWKAWKVKYYKGLGTSTAKEAKEYFTNMDRHRIVFKYEGPTDDDAIELA 673

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKELILFSMADLQ 719
            FSKK++E RK WL  +            P  +L Q++ K I Y  F++KELILFS  D +
Sbjct: 674  FSKKRVEDRKNWLGDWMLHKKQIQEANLPEEYLYQEDTKEISYKSFIDKELILFSNMDNE 733

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+EHSAYHHGE SL STI+ +A
Sbjct: 734  RSIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEHSAYHHGEVSLMSTIINLA 793

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
             +FVGSNNIN+L P GQFGTR  GG+DAASARYIFT LSP+TR +F  DD+  L++L ED
Sbjct: 794  HNFVGSNNINILLPIGQFGTRLLGGRDAASARYIFTMLSPVTRAMFCTDDEPNLNFLFED 853

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q+IEP WY PI+P VLVNG EGIGTGWS+ +PN++PR +V N++RL+N E + PM+PWY
Sbjct: 854  NQKIEPFWYCPILPLVLVNGCEGIGTGWSTKVPNHDPRIVVKNLKRLMNDEELLPMYPWY 913

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F G I    S      +   G I  V++TTL I ELPI  WTQ+Y+E  LE ++   D
Sbjct: 914  KNFQGEI----STLNASRFVCFGEIASVDDTTLEITELPIGTWTQNYKESVLEPMLYGAD 969

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
                 I+ F++Y  DTTV F + +S+E M      G+ K FKL T I++S+M LFD  G 
Sbjct: 970  GKQPVIQDFKEYHTDTTVRFIIRMSKEKMAEANAHGIHKYFKLQTIINSSSMVLFDEHGC 1029

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +KK++T + IL  F+ +RL+ Y KRK     +LE +  +L+ + RFI+  + G I + N 
Sbjct: 1030 LKKFETAKDILISFYKVRLDMYVKRKAYLEGHLEAQANRLKAQARFIMEKIEGVIKIENM 1089

Query: 1076 KRTDLLLELRQKGFTPFP-------KNSKSIEAV--VAGATDETEESEENPEVVNGVQSI 1126
            K+  ++ +L ++G+   P       +N + ++A+      TDE  E EE       V   
Sbjct: 1090 KKKHIVEQLVERGYPADPVKKWKEAENMRKLKAMEEFVDETDEANEVEETGANEEDVCLS 1149

Query: 1127 DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
            DYDYLLSMA+  L+ E+   LL DRD   +E++ L+  TP+ LW++DLD     LD LDK
Sbjct: 1150 DYDYLLSMALIRLSEEEKDKLLKDRDVKIDELNSLKAKTPKMLWIEDLDKF---LDVLDK 1206

Query: 1187 SD-ARAEEERMKIKG---NGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVT 1242
             + +  EE    +KG   +G G+       K + +NARK            AM E + + 
Sbjct: 1207 HELSEKEEAASAVKGIVTSGKGN-------KASSRNARK------KVSTITAMPESEGIR 1253

Query: 1243 KVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEK 1302
              + P+  + L++  AEK D         +KQR+  L E   +       D+  + +  K
Sbjct: 1254 --IPPQITSDLREK-AEKAD--------QVKQRMINLREAAKAG------DEEAIKKLAK 1296

Query: 1303 VQVPAKKKEPSKRTAAQKKVVTVETSDS 1330
                 +K+    RT A  KVV  +TS++
Sbjct: 1297 -----RKRITGPRTVAGAKVVAKKTSET 1319


>gi|237830295|ref|XP_002364445.1| DNA topoisomerase II, putative [Toxoplasma gondii ME49]
 gi|211962109|gb|EEA97304.1| DNA topoisomerase II, putative [Toxoplasma gondii ME49]
 gi|221507315|gb|EEE32919.1| DNA topoisomerase II, putative [Toxoplasma gondii VEG]
          Length = 1687

 Score = 1159 bits (2998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1307 (47%), Positives = 814/1307 (62%), Gaps = 154/1307 (11%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            TIE+ YQKKSQLEHILLRPDTYIGS E HTQALW+ EE  +TM+++TI+YVPGLYKI DE
Sbjct: 36   TIEQRYQKKSQLEHILLRPDTYIGSTEVHTQALWVMEEGQETMVYKTINYVPGLYKIVDE 95

Query: 86   ILVNAADNKQRDP-------------KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEG 132
            ILVNAAD K R+              +M A+K+ I++    I++ N G+G+PV IHQE  
Sbjct: 96   ILVNAADVKAREGEEQKGKPLKPGARRMSAIKIDINKASGRITIWNDGEGIPVAIHQEHK 155

Query: 133  VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVF 192
            VYVPE+IFG LLTS NYDD+  + TGGRNGYGAKLTNIFS EF +E ADG+R KK+K  +
Sbjct: 156  VYVPEMIFGQLLTSDNYDDSECRVTGGRNGYGAKLTNIFSREFTVECADGERKKKFKMTW 215

Query: 193  TNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKS 252
            T NM +KSE  IS    G ++ K+SF PD AKF MT  +DD ++L++KR  DLAG  G  
Sbjct: 216  TKNMEQKSESEISSYN-GTDYVKISFIPDFAKFGMTGFDDDSLSLLRKRAYDLAGTSG-- 272

Query: 253  VKVELNGHRVPVKSFAEYVDMY-------------------------------------- 274
            VKV LNG R+ + SF++YVD+Y                                      
Sbjct: 273  VKVFLNGTRIDINSFSQYVDLYLGGRKSEKPSKEKEEFDESDDDWDEGPKRKKAAKKNGK 332

Query: 275  --------------PKSVTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIKGGTHVD 319
                           K V + H++   RWE+ ++ ++G QFQQVSFVN I T KGGTHV 
Sbjct: 333  KGELEDEEDVANGVEKKVIKIHDK-QWRWEVVISSTDGGQFQQVSFVNSICTTKGGTHVS 391

Query: 320  YVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            +V   +   ++   N KNK    +KA +VK HLW+FV+ LI NPAFDSQTKETLT + + 
Sbjct: 392  HVIEPLLAAIVKKANTKNKGGMEIKAAHVKQHLWIFVSCLIVNPAFDSQTKETLTTKPAK 451

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS-------------------------- 412
            FGSKC L+++ + +V  KS IVE ++ WA  KQ                           
Sbjct: 452  FGSKCTLADKTIGQVV-KSSIVENVVLWAQTKQQSVRAFSLSLLDCWRLGALSVDRPVFR 510

Query: 413  --------KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGL 464
                    K +K       E + GI KLEDAN AGGR+S+ CTLILTEGDSAK   +AGL
Sbjct: 511  LLVFVELRKQMKVGKTKGRERLAGIPKLEDANDAGGRHSQDCTLILTEGDSAKTSCLAGL 570

Query: 465  SVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHL 524
            SVVGRDR+GVFPLRGKLLNVR+AS  Q+  N EI NI KI+GL+      + + LRYG +
Sbjct: 571  SVVGRDRYGVFPLRGKLLNVRDASFKQLTENKEIQNILKIVGLQVNDRTEDTRGLRYGSV 630

Query: 525  MIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIP 584
            MIMTDQ                            DHDGSHIKGLLIN +H +WP LLK  
Sbjct: 631  MIMTDQ----------------------------DHDGSHIKGLLINMMHHYWPQLLKCR 662

Query: 585  SFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGK 644
             FL  F TPIVK + KN    +FY++P+YE WK S   N + W IKYYKGLGTST +E K
Sbjct: 663  GFLKAFSTPIVKVS-KNNVEKAFYTIPEYEQWKRSC--NTTGWKIKYYKGLGTSTDREFK 719

Query: 645  EYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSD 704
            EYF ++  H+ DFVW    DGE I++AF+KK+ E RK+WL  ++ G  +D     + YSD
Sbjct: 720  EYFNDLDKHQIDFVWSGQHDGELIDMAFNKKRAEDRKRWLQSYQEGTFVDHNASSLSYSD 779

Query: 705  FVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAY 764
            FVNKELILFS  D +RSIP +VDG KPGQRK+LF   K+N   E KVAQ +GYVSE SAY
Sbjct: 780  FVNKELILFSRYDTERSIPQLVDGWKPGQRKVLFACIKKNMKHELKVAQLAGYVSEVSAY 839

Query: 765  HHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFL 824
            HHGE SL  TI+ MAQ FVGSNN+N L+P GQFG+R +GGKDA++ARYIFTRL+  TR +
Sbjct: 840  HHGEASLQQTIVTMAQRFVGSNNLNFLEPVGQFGSRKEGGKDASAARYIFTRLAFYTRLV 899

Query: 825  FPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVR 884
            F + DD +L+Y  E+GQ+IEP  Y+P+IPTVL+NGSEGIGTGWSS++PNYNPRD++ N+R
Sbjct: 900  FHEADDPILEYEYEEGQRIEPKMYVPVIPTVLINGSEGIGTGWSSFVPNYNPRDVIENLR 959

Query: 885  RLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQ 944
            R ++GE M+ M PWYRGF G IE+ A   AG  +   G++    E T  I ELPI+RWTQ
Sbjct: 960  RYIDGEEMQRMTPWYRGFRGRIEENA---AGTGFETIGLVRRCGEDTYEITELPIKRWTQ 1016

Query: 945  DYREFLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTT 1001
            DY+E+LE  +   ++ D+ I  +R  S    + F V + EE + R ++EGL K FKL ++
Sbjct: 1017 DYKEWLEENLPTAEKRDTLIADYRDCSSHEEIHFTVKVGEERVERPEREGLEKYFKLKSS 1076

Query: 1002 ISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRF 1061
            +S +N+ LFD  G +++Y    +I++EF  IRLEFY +RK   L  LE     L N++RF
Sbjct: 1077 LSITNLTLFDPHGRVQRYANELEIIKEFAPIRLEFYHRRKAYCLAMLEKARRILSNRLRF 1136

Query: 1062 ILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA---------TDETEE 1112
            IL VVNGE+++NN+++  L+ EL  +G+ P  +   +  A +  A             E 
Sbjct: 1137 ILAVVNGELIINNKRKKALIEELFSQGYDPMKEIEDAANAGIRAALKRDVTVDDEALAEG 1196

Query: 1113 SEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVK 1172
             EE  E+V G  +  YDYLL M + +LTLEKV+ L  +  +   E+++LR  + ++LW +
Sbjct: 1197 GEEEEEIVAGCTAKHYDYLLGMPMWSLTLEKVEDLRGEMRQKELELEELRHTSVQTLWKR 1256

Query: 1173 DLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNA 1219
            DLDAL   LD+ D  D    +E  K + N    AG  +  K+  + A
Sbjct: 1257 DLDALVAALDKQDGIDEMLLQEGRKFQKNAR--AGQALSQKQKQRKA 1301


>gi|242016991|ref|XP_002428978.1| DNA topoisomerase 2-beta, putative [Pediculus humanus corporis]
 gi|212513807|gb|EEB16240.1| DNA topoisomerase 2-beta, putative [Pediculus humanus corporis]
          Length = 1223

 Score = 1158 bits (2996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 618/1199 (51%), Positives = 809/1199 (67%), Gaps = 75/1199 (6%)

Query: 16   NVVGPTAPNK---TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRT 72
            N V P    K   T+EE+YQKKSQLEHILLRPDTYIGS+E   + +WIY+ E++ MI + 
Sbjct: 19   NAVPPAKKIKSKTTVEEIYQKKSQLEHILLRPDTYIGSVEPVKENMWIYDNETEKMIQKD 78

Query: 73   ISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEG 132
            I+YVPGLYKIFDEILVNAADNKQRD KMD +K+ ID E++ +SV N+G G+PV  H+EE 
Sbjct: 79   ITYVPGLYKIFDEILVNAADNKQRDKKMDCIKIDIDAENNTVSVWNNGQGIPVVEHKEEK 138

Query: 133  VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVF 192
            ++VP +IFG+LLTSSNY+D  +K TGGRNGYGAKL NIFST+F +ETA  +  +K+KQ +
Sbjct: 139  MFVPTMIFGYLLTSSNYNDEEEKVTGGRNGYGAKLCNIFSTKFTLETASIEYKRKFKQTW 198

Query: 193  TNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKS 252
             NNM K ++P IS    G+++TKV+F PDLAKF MTHL+ D+V LM +R  D+A    + 
Sbjct: 199  ANNMTKTTDPKISDF-FGEDFTKVTFSPDLAKFKMTHLDKDIVDLMSRRAYDVAAS-TRG 256

Query: 253  VKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVS 304
            VKV LNG R+P+KSF +YV++Y K         V   +E VNERWE+ VT+S+  FQQVS
Sbjct: 257  VKVILNGKRLPIKSFKDYVELYTKGKEDDAGNPVKIIYENVNERWEVAVTMSDNDFQQVS 316

Query: 305  FVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPA 363
            FVN IAT KGG HVD+V + +   ++ V NKKNK    +KAH +KNHLW+F+N LI NP 
Sbjct: 317  FVNSIATTKGGRHVDHVTDILVKKLLEVCNKKNKAGMQLKAHQIKNHLWIFINCLIVNPT 376

Query: 364  FDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTK 422
            FDSQTK  +TL+  +FGSKC LS++F+  VT K G++E +LSWA FK    + +K  G K
Sbjct: 377  FDSQTKTHMTLQMKNFGSKCTLSDKFITNVT-KCGVIEAVLSWAKFKAEAQMDRKCSGKK 435

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
               ++GI+KLEDAN AG +NS  CTLILTEGDSAK+LA++GL VVGRD++GVFPLRGKLL
Sbjct: 436  MTKLKGIAKLEDANDAGTKNSVNCTLILTEGDSAKSLAVSGLGVVGRDKYGVFPLRGKLL 495

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFL 539
            NVREA+  Q+L N+EI N+ KILGL+   +Y   +++K+LRYG LMIMTDQ         
Sbjct: 496  NVREATHKQILENAEINNLIKILGLQYKKKYESSDDLKTLRYGKLMIMTDQ--------- 546

Query: 540  LWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATN 599
                               D DGSHIKGL+INFIH  WPSLL++P FL EFITPIVKAT 
Sbjct: 547  -------------------DQDGSHIKGLIINFIHHNWPSLLRLP-FLEEFITPIVKAT- 585

Query: 600  KNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
            K  + LSFYS+P++E WK++   NA  +  KYYKGLGTSTSKE KEYFQ++  H+  F +
Sbjct: 586  KGKEELSFYSLPEFEDWKKA-TENAHLYRTKYYKGLGTSTSKEAKEYFQDMKRHRILFNY 644

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLLQF--------EPG---NHLDQKEKY-IKYSDFVN 707
            +   D   I +AFSKK  + RK+WL  +        E G     L QK    + YSDF+N
Sbjct: 645  DGPSDDYCINMAFSKKCADQRKEWLTSWMEDCKRRRETGLGEAFLYQKNTIAVSYSDFIN 704

Query: 708  KELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHG 767
            KEL+LFS  D +RSIPSMVDGLKPGQRK+LF   KRN  KE KVAQ +G V+EHSAYHHG
Sbjct: 705  KELVLFSNLDNERSIPSMVDGLKPGQRKVLFTCLKRNDKKEIKVAQLAGSVAEHSAYHHG 764

Query: 768  EQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPK 827
            E SL  TI+ +AQ++VGSNN+NLL P GQFGTR QGGKDAAS RYIFT L+P+TR +F  
Sbjct: 765  EASLMGTIINLAQNYVGSNNLNLLLPIGQFGTRLQGGKDAASPRYIFTLLNPLTRLIFHV 824

Query: 828  DDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL 887
             DD LL Y  +D Q+IEP WY+PIIP VLVNG++GIGTGW + IPN+NPR+IV N++R+L
Sbjct: 825  HDDPLLKYNKDDNQKIEPEWYIPIIPMVLVNGADGIGTGWMTKIPNHNPREIVQNIKRML 884

Query: 888  NGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYR 947
            +G+   PM PWY+GF G IE          Y V+G I  ++   L I ELP+  WTQ Y+
Sbjct: 885  DGDEPLPMKPWYKGFKGDIESYGDSR----YLVSGEISIISNNQLEITELPVGTWTQAYK 940

Query: 948  E-----FLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTI 1002
            E      L  + ++    I+ +++Y+ DTTV F + +    + + ++EGL K FKL +TI
Sbjct: 941  ENVLEPLLHGVENKVPPLIQDYKEYNTDTTVRFVIQMEPSKLQKFEEEGLHKVFKLQSTI 1000

Query: 1003 STSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFI 1062
            S ++M  FDS GV+K+ +    IL+EF+ +R+ FY KRK      L+ E  KL N+ RFI
Sbjct: 1001 SINSMCTFDSNGVLKRSEDVTVILKEFYDLRMLFYVKRKSYLEGMLQSEADKLSNQARFI 1060

Query: 1063 LGVVNGEIVVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEESEENPE 1118
            +   +G++V+ N+K+  ++ EL +  +   P    K +   EA +       +E   + E
Sbjct: 1061 IEKCDGKLVIENKKKKVMIDELVKLKYESDPVKTWKTNIDKEAALTYGEIWEDEGSGSEE 1120

Query: 1119 VVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
                    DYDYLL M + +LTLE+   LL  RD   +E+  L+  +P  LW +DLDA 
Sbjct: 1121 EGTVRSGPDYDYLLGMPLWSLTLERKNELLKKRDDKIKELKSLQAKSPSLLWREDLDAF 1179


>gi|391343500|ref|XP_003746047.1| PREDICTED: DNA topoisomerase 2-beta [Metaseiulus occidentalis]
          Length = 1489

 Score = 1158 bits (2996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1258 (48%), Positives = 829/1258 (65%), Gaps = 75/1258 (5%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEI 86
            IE++YQKK+QLEH+LLRPDTYIGS+E  TQ +W+++ E + M+ R I+YVPGLYKIFDEI
Sbjct: 5    IEKIYQKKTQLEHVLLRPDTYIGSVEPLTQKMWVFDGEQEGMVMREITYVPGLYKIFDEI 64

Query: 87   LVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
            LVNAADNK RD   D +K+ ID E ++ISV N+G G+PV +HQ+E  YVP LIFGHLLTS
Sbjct: 65   LVNAADNKHRDKNQDCIKIEIDPEKNMISVWNNGKGIPVVMHQKEKCYVPTLIFGHLLTS 124

Query: 147  SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            SNY+D  KK TGGRNGYGAKL NIFST+F +ETA   + + +KQ +++NM   +EP I  
Sbjct: 125  SNYNDEEKKVTGGRNGYGAKLCNIFSTKFTVETASRDQKRAFKQSWSDNMTNTAEPKIVD 184

Query: 207  CKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
              +  ++TK++F PDL+KF M  ++ D +AL+ +R  D+AGC    VKV LNG R+P+KS
Sbjct: 185  SSQ--DYTKITFYPDLSKFKMEKMDKDFIALISRRAYDVAGCT-PGVKVFLNGTRLPIKS 241

Query: 267  FAEYVDMYP---------KSVTRFHERVNERWEICVTLS-EGQFQQVSFVNGIATIKGGT 316
            F +YV M+          K +   HE+VNERWE+   LS EG F+Q+SFVN IAT KGGT
Sbjct: 242  FKDYVQMFTSKCVNEDSDKPLVVVHEQVNERWEVACCLSPEGDFKQMSFVNNIATTKGGT 301

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HV+YV + +   +   V KKNK   N+    +++H+W+F+N LI+NP FDSQTKE +T +
Sbjct: 302  HVEYVVDSLCKKLTEQVKKKNKAGVNIGKKQIRDHMWIFINCLIENPTFDSQTKENMTKQ 361

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR-GISKLED 434
               FGSKC +SE+F   V  K GIVE ++SW  FK  K++ K           GI KLED
Sbjct: 362  AKQFGSKCVVSEKFQNNVL-KCGIVEAIMSWVQFKAQKEMNKKCSKSKVSKLKGIPKLED 420

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG   S  CTLILTEGDSAK LA++GL V+GRD++GVFPL+GK+LNVREA+  Q++ 
Sbjct: 421  ANDAGTVRSIDCTLILTEGDSAKTLAVSGLGVIGRDKYGVFPLKGKILNVREATHKQIIE 480

Query: 495  NSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+   +Y    ++K+LRYG +MIMTDQ                     
Sbjct: 481  NAEINNIIKIVGLQYKKKYETPEDMKTLRYGRIMIMTDQ--------------------- 519

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK+ +FL EFITPIVKA   N +  SF+S+P
Sbjct: 520  -------DQDGSHIKGLLINFIHHNWPSLLKM-NFLEEFITPIVKAIKGNQE-FSFFSLP 570

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            ++E WK +   + + + IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI+LA
Sbjct: 571  EFEEWKAATP-DWNKFRIKYYKGLGTSTAKEAKEYFSDMRRHRITFSYAGAEDDNAIQLA 629

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKELILFSMADLQ 719
            FSKK ++ RK WL               P  +L  KE + + ++DFV+KELILFS  D +
Sbjct: 630  FSKKMVDERKTWLTNGMEDRKQRRTLGLPEIYLYGKETRAVSFNDFVHKELILFSNMDNE 689

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS++DG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQSL  TI+ +A
Sbjct: 690  RSIPSLIDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQSLMMTIVNLA 749

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNN+NLLQP GQFGTR QGGKD+AS RYIFT+LSP+ R LFP+ DD +L+YL +D
Sbjct: 750  QNFVGSNNVNLLQPIGQFGTRLQGGKDSASPRYIFTKLSPLARHLFPESDDPVLNYLFDD 809

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
              +IEP +Y+PIIP VLVNG+EGIGTGWS+ + NYNPR++VAN++RLLN E ++ MHPWY
Sbjct: 810  NLKIEPDFYLPIIPMVLVNGAEGIGTGWSTKVQNYNPREVVANIKRLLNDEPLKKMHPWY 869

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQND 958
            + F G I      E    Y V G +  +    L I ELP++ WTQ Y+E  LE+++  +D
Sbjct: 870  KNFRGEIH--VLDEERTRYVVYGEVSILGNKKLEITELPVKTWTQQYKENVLETLLHGSD 927

Query: 959  ---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
                 I+ +++Y+ DTTV F V + E ++ R + EGL K FKL TT++ ++M LFDS G 
Sbjct: 928  KIPGIIQDYKEYNTDTTVRFVVQMDEGNLRRAEDEGLHKVFKLQTTLANTSMVLFDSNGC 987

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            I+ Y TPE+I++EF+++RL+ Y +R++  +  L  E  KL N+ RFI+   +G+I V N+
Sbjct: 988  IRFYQTPEEIMQEFYNVRLDGYVRRREYLIGLLTAEAEKLSNQARFIVEKCDGKIHVENK 1047

Query: 1076 KRTDLLLELRQKGFTPFP-----KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            KR +++  L  KG+ P P     +   + +   A A  E EESE + E     Q+ DY Y
Sbjct: 1048 KRKEMMRILVDKGYDPDPMLRWKEKHTTNQEKEAEAGLEDEESENSAEAREDAQTKDYGY 1107

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK + LL  RD    E+D ++K TP+ LW  DLDA  ++L+E+++ +  
Sbjct: 1108 LLGMTMWNLTYEKKEELLKKRDLKLAELDAIKKKTPKDLWRTDLDAFLVKLEEVERKEIE 1167

Query: 1191 AEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPK 1248
              ++  K         G +  + + P++    D +       EA+ E   V K +K K
Sbjct: 1168 DMQKSAKKSVAQKTTKGGRAFSSKNPEHLPSADGERVAPTIDEALKE--KVAKAIKAK 1223


>gi|221487518|gb|EEE25750.1| DNA topoisomerase II, putative [Toxoplasma gondii GT1]
          Length = 1688

 Score = 1158 bits (2995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 624/1307 (47%), Positives = 814/1307 (62%), Gaps = 154/1307 (11%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            TIE+ YQKKSQLEHILLRPDTYIGS E HTQALW+ EE  +TM+++TI+YVPGLYKI DE
Sbjct: 36   TIEQRYQKKSQLEHILLRPDTYIGSTEVHTQALWVMEEGQETMVYKTINYVPGLYKIVDE 95

Query: 86   ILVNAADNKQRDP-------------KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEG 132
            ILVNAAD K R+              +M A+K+ I++    IS+ N G+G+PV IHQE  
Sbjct: 96   ILVNAADVKAREGEEQKGKPLKPGARRMSAIKIDINKASGRISIWNDGEGIPVAIHQEHK 155

Query: 133  VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVF 192
            VYVPE+IFG LLTS NYDD+  + TGGRNGYGAKLTNIFS EF +E ADG+R KK+K  +
Sbjct: 156  VYVPEMIFGQLLTSDNYDDSECRVTGGRNGYGAKLTNIFSREFTVECADGERKKKFKMTW 215

Query: 193  TNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKS 252
            T NM +KSE  IS    G ++ K+SF PD AKF MT  +DD ++L++KR  DLAG  G  
Sbjct: 216  TKNMEQKSESEISSYN-GTDYVKISFIPDFAKFGMTGFDDDSLSLLRKRAYDLAGTSG-- 272

Query: 253  VKVELNGHRVPVKSFAEYVDMY-------------------------------------- 274
            VKV LNG R+ + SF++YVD+Y                                      
Sbjct: 273  VKVFLNGTRIDINSFSQYVDLYLGGRKSEKPSKEKEEFDESDDDWDEGPKRKKAAKKNGK 332

Query: 275  --------------PKSVTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIKGGTHVD 319
                           K V + H++   RWE+ ++ ++G QFQQVSFVN I T KGGTHV 
Sbjct: 333  KGELEDEEDVANGVEKKVIKIHDK-QWRWEVVISSTDGGQFQQVSFVNSICTTKGGTHVS 391

Query: 320  YVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            +V   +   ++   N KNK    +KA +VK HLW+FV+ LI NPAFDSQTKETLT + + 
Sbjct: 392  HVIEPLLAAIVKKANTKNKGGMEIKAAHVKQHLWIFVSCLIVNPAFDSQTKETLTTKPAK 451

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS-------------------------- 412
            FGSKC L+++ + +V  KS IVE ++ WA  KQ                           
Sbjct: 452  FGSKCTLADKTIGQVV-KSSIVENVVLWAQTKQQSVRAFSLSLLDCWRRGALSVDRPVFR 510

Query: 413  --------KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGL 464
                    K +K       E + GI KLEDAN AGGR+S+ CTLILTEGDSAK   +AGL
Sbjct: 511  LFVFVELRKQMKVGKTKGRERLAGIPKLEDANDAGGRHSQDCTLILTEGDSAKTSCLAGL 570

Query: 465  SVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHL 524
            SVVGRDR+GVFPLRGKLLNVR+AS  Q+  N EI NI KI+GL+      + + LRYG +
Sbjct: 571  SVVGRDRYGVFPLRGKLLNVRDASFKQLTENKEIQNILKIVGLQVNDRTEDTRGLRYGSV 630

Query: 525  MIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIP 584
            MIMTDQ                            DHDGSHIKGLLIN +H +WP LLK  
Sbjct: 631  MIMTDQ----------------------------DHDGSHIKGLLINMMHHYWPQLLKCR 662

Query: 585  SFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGK 644
             FL  F TPIVK + KN    +FY++P+YE WK S   N + W IKYYKGLGTST +E K
Sbjct: 663  GFLKAFSTPIVKVS-KNNVEKAFYTIPEYEQWKRSC--NTTGWKIKYYKGLGTSTDREFK 719

Query: 645  EYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSD 704
            EYF ++  H+ DFVW    DGE I++AF+KK+ E RK+WL  ++ G  +D     + YSD
Sbjct: 720  EYFNDLDKHQIDFVWSGQHDGELIDMAFNKKRAEDRKRWLQSYQEGTFVDHNASSLSYSD 779

Query: 705  FVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAY 764
            FVNKELILFS  D +RSIP +VDG KPGQRK+LF   K+N   E KVAQ +GYVSE SAY
Sbjct: 780  FVNKELILFSRYDTERSIPQLVDGWKPGQRKVLFACIKKNMKHELKVAQLAGYVSEVSAY 839

Query: 765  HHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFL 824
            HHGE SL  TI+ MAQ FVGSNN+N L+P GQFG+R +GGKDA++ARYIFTRL+  TR +
Sbjct: 840  HHGEASLQQTIVTMAQRFVGSNNLNFLEPVGQFGSRKEGGKDASAARYIFTRLAFYTRLV 899

Query: 825  FPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVR 884
            F + DD +L+Y  E+GQ+IEP  Y+P+IPTVL+NGSEGIGTGWSS++PNYNPRD++ N+R
Sbjct: 900  FHEADDPILEYEYEEGQRIEPKMYVPVIPTVLINGSEGIGTGWSSFVPNYNPRDVIENLR 959

Query: 885  RLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQ 944
            R ++GE M+ M PWYRGF G IE+ A   AG  +   G++    E +  I ELPI+RWTQ
Sbjct: 960  RYIDGEEMQRMTPWYRGFRGRIEENA---AGTGFETIGLVRRCGEDSYEITELPIKRWTQ 1016

Query: 945  DYREFLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTT 1001
            DY+E+LE  +   ++ D+ I  +R  S    + F V + EE + R ++EGL K FKL ++
Sbjct: 1017 DYKEWLEENLPTAEKRDTLIADYRDCSSHEEIHFTVKVGEERVERPEREGLEKYFKLKSS 1076

Query: 1002 ISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRF 1061
            +S +N+ LFD  G +++Y    +I++EF  IRLEFY +RK   L  LE     L N++RF
Sbjct: 1077 LSITNLTLFDPHGRVQRYANELEIIKEFAPIRLEFYHRRKAYCLAMLEKARRILSNRLRF 1136

Query: 1062 ILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA---------VVAGATDETEE 1112
            IL VVNGE+++NN+++  L+ EL  +G+ P  +   +  A         V+       E 
Sbjct: 1137 ILAVVNGELIINNKRKKALIEELFSQGYDPMKEIEDAANAGIRAALKRDVIVDDEALAEG 1196

Query: 1113 SEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVK 1172
             EE  E+V G  +  YDYLL M + +LTLEKV+ L  +  +   E+++LR  + ++LW +
Sbjct: 1197 GEEEEEIVAGCTAKHYDYLLGMPMWSLTLEKVEDLRGEMRQKELELEELRHTSVQTLWKR 1256

Query: 1173 DLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNA 1219
            DLDAL   LD+ D  D    +E  K + N    AG  +  K+  + A
Sbjct: 1257 DLDALVAALDKQDGIDEMLLQEGRKFQKNAR--AGQALSQKQKQRKA 1301


>gi|380013857|ref|XP_003690962.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Apis
            florea]
          Length = 1497

 Score = 1157 bits (2993), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1202 (50%), Positives = 808/1202 (67%), Gaps = 84/1202 (6%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            +A  KTIE +YQKKSQLEHILLRPDTYIGS+E  T+ +WIY++E ++MI + I YVPGLY
Sbjct: 13   SAKKKTIEGIYQKKSQLEHILLRPDTYIGSVEPVTETMWIYDKEKESMIQKXIKYVPGLY 72

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADNKQRDPKMD +K+ I+ E+++ISV N+G G+PV IH+EE +YVP +IF
Sbjct: 73   KIFDEILVNAADNKQRDPKMDTIKIEINAENNIISVWNNGKGIPVVIHKEENMYVPTMIF 132

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            GHLLTSSNYDD  +K TGGRNGYGAKL NIFS  F +ETA  +  K  KQ ++NNMG  S
Sbjct: 133  GHLLTSSNYDDEEEKVTGGRNGYGAKLCNIFSHRFTVETASKEYKKCLKQTWSNNMGSAS 192

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
            EP I K   G+++TKV F PDL+KF M  L+DD++ALM +R  D+A    + VKV LNG 
Sbjct: 193  EPRI-KDFSGEDFTKVIFSPDLSKFKMQSLDDDIIALMSRRAYDIAAST-RGVKVFLNGT 250

Query: 261  RVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATI 312
            ++PVK+F +YVD Y K         +   +E    RWE+ +TLS+  FQQ+SFVN IAT 
Sbjct: 251  KIPVKNFKDYVDFYIKGREDDVGNPLKIVYENCGPRWEVAITLSDKGFQQMSFVNSIATT 310

Query: 313  KGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
            KGG HVD+V   +   +   + KKNK    +K   +KNHLW+F+N LI+NP FDSQTKE 
Sbjct: 311  KGGRHVDHVTELIVKQLTETLKKKNKAGVTIKPFQIKNHLWIFINCLINNPTFDSQTKEN 370

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK-NDGTKTEDVRGIS 430
            +TL+  SFGSKC LSE+F+  VT K GIVE +L+WA FK    L+K    +K   ++GI 
Sbjct: 371  MTLQAKSFGSKCTLSEKFITSVT-KIGIVEAVLTWAKFKADSQLQKLGPKSKQRKLQGIP 429

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KLEDAN AG   S +CTLILTEGDSAK +A++GL+ +GRD++G+FPLRGK+LNVREA+  
Sbjct: 430  KLEDANDAGTNKSLECTLILTEGDSAKTMAVSGLAAIGRDKYGIFPLRGKILNVREATHK 489

Query: 491  QVLNNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            Q+L N+EI N+ KILGL+   +Y    ++K+LRYG +MIMTDQ                 
Sbjct: 490  QILENAEINNLIKILGLQYKKKYETREDLKTLRYGKMMIMTDQ----------------- 532

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSF 607
                       D DGSHIKGLLINFIH  WPSLLK+ +F+ EFITPIVKAT K  +VLSF
Sbjct: 533  -----------DQDGSHIKGLLINFIHHNWPSLLKL-NFVEEFITPIVKAT-KGNQVLSF 579

Query: 608  YSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA 667
            +SMP++  WK S   N  ++ IKYYKGLGTST+KE KEYF+N+T H+  F ++ DQD + 
Sbjct: 580  FSMPEFNKWK-SETENFHTYKIKYYKGLGTSTAKEAKEYFENMTRHRIRFRYDGDQDDQN 638

Query: 668  IELAFSKKKIEARKKWLLQFEPGNHLDQK---------EKY--------IKYSDFVNKEL 710
            I +AFSKK ++ RK WL+     NH+D+          E+Y        + +SDF+N EL
Sbjct: 639  IIMAFSKKCVDQRKDWLM-----NHMDETKRRKEIGLGERYLYEKDTRTVSFSDFINVEL 693

Query: 711  ILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQS 770
            +L+S  D  RSIP+M+DG KPGQRK+L+   KRN  +E KVAQ +G V+EHSAYHHGE S
Sbjct: 694  VLYSNYDNVRSIPNMIDGFKPGQRKVLYTCLKRNDKREVKVAQLAGSVAEHSAYHHGEVS 753

Query: 771  LASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDD 830
            L STI+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LSP+ R++F K DD
Sbjct: 754  LMSTIINLAQNFVGSNNINLLQPIGQFGTRLAGGKDAASPRYIFTMLSPLARYIFHKHDD 813

Query: 831  KLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE 890
             LL +  +D Q+IEP +Y+P IP VLVNG++GIGTGW + IPNYNPR+I+ N+ R+++G 
Sbjct: 814  ALLKHEYDDNQKIEPVFYIPTIPMVLVNGADGIGTGWMTKIPNYNPREIIENLYRMMDGA 873

Query: 891  MMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-F 949
              +PM P+Y+ F G IE          Y + G I  +    + I ELPI  WTQ Y+E  
Sbjct: 874  DPKPMVPYYKNFKGVIESCGD----FRYIINGEISVIGPDKVEITELPIGTWTQTYKETV 929

Query: 950  LESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN 1006
            LE ++   D+  + I  +++Y+ DT V F + L+ + ++  +++GL K FKL TT++ ++
Sbjct: 930  LEPMLHGTDKTPATITDYKEYNTDTAVHFIIMLNRDKLLELERDGLHKAFKLQTTMTVTS 989

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            M  FD    ++KYD+  QIL+ F+ +RLE Y KRK+     L+ E  KL N+ RFI+   
Sbjct: 990  MCAFDENQCLQKYDSVLQILKGFYKVRLEMYHKRKEYLEGILQAEASKLSNQARFIVEKC 1049

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEESEENPEVVNG 1122
            +G IV+ N+KR D++ EL ++ +   P    K S++ E V+    +  ++   +  V+  
Sbjct: 1050 DGTIVIENKKRKDMIAELIRREYESDPVLAWKLSQNREEVLEEVAENVDDETVSSTVITK 1109

Query: 1123 VQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
                ++DYLL M + +LT EK   LL  +D    E+  L+  TP SLW +DLD L  +L+
Sbjct: 1110 E---NFDYLLGMTLWSLTKEKKDELLRQKDDKLAELKRLQARTPISLWKEDLDNLLNELN 1166

Query: 1183 EL 1184
             L
Sbjct: 1167 RL 1168


>gi|17136538|ref|NP_476760.1| topoisomerase 2, isoform A [Drosophila melanogaster]
 gi|442628399|ref|NP_001260580.1| topoisomerase 2, isoform B [Drosophila melanogaster]
 gi|135995|sp|P15348.1|TOP2_DROME RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|8711|emb|CAA43523.1| DNA topoisomerase type II [Drosophila melanogaster]
 gi|22946840|gb|AAF53802.2| topoisomerase 2, isoform A [Drosophila melanogaster]
 gi|440213938|gb|AGB93115.1| topoisomerase 2, isoform B [Drosophila melanogaster]
          Length = 1447

 Score = 1157 bits (2992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1212 (49%), Positives = 814/1212 (67%), Gaps = 98/1212 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE+MYQKKSQLEHILLRPD+YIGS+E   + +W+Y+     M+ + IS+VPGLYKIFDE
Sbjct: 9    SIEQMYQKKSQLEHILLRPDSYIGSVEFTKELMWVYDNSQNRMVQKEISFVPGLYKIFDE 68

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M+ +K+ ID E +++SV N+G G+PV +H+E+ +YVP +IFGHLLT
Sbjct: 69   ILVNAADNKQRDKSMNTIKIDIDPERNMVSVWNNGQGIPVTMHKEQKMYVPTMIFGHLLT 128

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKL NIFST F +ETA  +  K +KQ + NNMGK S+  I 
Sbjct: 129  SSNYNDDEKKVTGGRNGYGAKLCNIFSTSFTVETATREYKKSFKQTWGNNMGKASDVQI- 187

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G ++T+++F PDLAKF M  L++D+VALM +R  D+A    K V V LNG+++ V+
Sbjct: 188  KDFNGTDYTRITFSPDLAKFKMDRLDEDIVALMSRRAYDVAAS-SKGVSVFLNGNKLGVR 246

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            +F +Y+D++ K+        +   HE  NERWE+    S+  FQQVSFVN IAT KGG H
Sbjct: 247  NFKDYIDLHIKNTDDDSGPPIKIVHEVANERWEVACCPSDRGFQQVSFVNSIATYKGGRH 306

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD+V + +   ++ V+ KKNK   N+K   V+NHLWVFVN LI+NP FDSQTKE +TL+Q
Sbjct: 307  VDHVVDNLIKQLLEVLKKKNKGGINIKPFQVRNHLWVFVNCLIENPTFDSQTKENMTLQQ 366

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
              FGSKC LSE+F+  ++ KSGIVE++L+WA FK   D+ K  G K+  ++GI KLEDAN
Sbjct: 367  KGFGSKCTLSEKFINNMS-KSGIVESVLAWAKFKAQNDIAKTGGRKSSKIKGIPKLEDAN 425

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AGG+NS +CTLILTEGDSAK+LA++GL V+GRD +GVFPLRGKLLNVREA+  Q+  N+
Sbjct: 426  EAGGKNSIKCTLILTEGDSAKSLAVSGLGVIGRDLYGVFPLRGKLLNVREANFKQLSENA 485

Query: 497  EIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            EI N+ KI+GL+   +Y   +++K+LRYG +MIMTDQ                       
Sbjct: 486  EINNLCKIIGLQYKKKYLTEDDLKTLRYGKVMIMTDQ----------------------- 522

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
                 D DGSHIKGLLINFIH+ WP LL++P FL EFITPIVKAT KN + LSFYS+P++
Sbjct: 523  -----DQDGSHIKGLLINFIHTNWPELLRLP-FLEEFITPIVKATKKNEE-LSFYSLPEF 575

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
            E WK     N  +++IKYYKGLGTSTSKE KEYFQ++  H+  F ++   D E+I +AFS
Sbjct: 576  EEWKNDTA-NHHTYNIKYYKGLGTSTSKEAKEYFQDMDRHRILFKYDGSVDDESIVMAFS 634

Query: 674  KKKIEARKKWLLQFEPGNHLDQ---------KEKY--------IKYSDFVNKELILFSMA 716
            KK IE+RK WL      NH+D+          E+Y        I Y+DF+N EL+LFS A
Sbjct: 635  KKHIESRKVWLT-----NHMDEVKRRKELGLPERYLYTKGTKSITYADFINLELVLFSNA 689

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D +RSIPS+VDGLKPGQRK++F  FKRN  +E KVAQ SG V+E SAYHHGE SL  TI+
Sbjct: 690  DNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIV 749

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQ+FVG+NNINLL+P GQFGTR  GGKD ASARYIFT +SP+TR ++   DD LLDY 
Sbjct: 750  NLAQNFVGANNINLLEPRGQFGTRLSGGKDCASARYIFTIMSPLTRLIYHPLDDPLLDYQ 809

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +DGQ+IEP WY+PIIP VLVNG+EGIGTGWS+ I NYNPR+I+ N+R+++NG+    MH
Sbjct: 810  VDDGQKIEPLWYLPIIPMVLVNGAEGIGTGWSTKISNYNPREIMKNLRKMINGQEPSVMH 869

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ 956
            PWY+ F G +E  +       Y  TG I+ ++   L I ELP+  WTQ+Y+E +   +  
Sbjct: 870  PWYKNFLGRMEYVSDGR----YIQTGNIQILSGNRLEISELPVGVWTQNYKENVLEPLSN 925

Query: 957  NDSFIRG----FRQYSDDTTVDFEVFLSEESMMRTKQE--GLLKKFKLTTTISTSNMHLF 1010
                ++G    +R+Y  DTTV F +  +     R   E  G  + FKLTTT+ST+ MH F
Sbjct: 926  GTEKVKGIISEYREYHTDTTVRFVISFAPGEFERIHAEEGGFYRVFKLTTTLSTNQMHAF 985

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    ++++ T   IL+E++ +R E+Y +R+   +  L  +  +L ++ RFIL     ++
Sbjct: 986  DQNNCLRRFPTAIDILKEYYKLRREYYARRRDFLVGQLTAQADRLSDQARFILEKCEKKL 1045

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP------------------KNSKSIEAVVAGATDETEE 1112
            VV N++R  +  EL ++G+ P P                  ++ +  EA  + ++   +E
Sbjct: 1046 VVENKQRKAMCDELLKRGYRPDPVKEWQRRIKMEDAEQADEEDEEEEEAAPSVSSKAKKE 1105

Query: 1113 SEENPE-VVNGVQSI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLW 1170
             E +PE     +  +  +DYLL M++  LT EK   LL  RD    E++ LRK TPE LW
Sbjct: 1106 KEVDPEKAFKKLTDVKKFDYLLGMSMWMLTEEKKNELLKQRDTKLSELESLRKKTPEMLW 1165

Query: 1171 VKDLDALDMQLD 1182
            + DLDAL+ +L+
Sbjct: 1166 LDDLDALESKLN 1177


>gi|195397652|ref|XP_002057442.1| GJ18099 [Drosophila virilis]
 gi|194141096|gb|EDW57515.1| GJ18099 [Drosophila virilis]
          Length = 1445

 Score = 1156 bits (2991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/1453 (44%), Positives = 902/1453 (62%), Gaps = 165/1453 (11%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE+MYQKKSQLEHILLRPD+YIGS+E   + +W+++ E   M+ R IS+VPGLYKIFDE
Sbjct: 10   SIEQMYQKKSQLEHILLRPDSYIGSVEFTKELMWVHDVEKNRMVQREISFVPGLYKIFDE 69

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M+ +KV ID E +L+S+ N+G G+PV +H++E +YVP +IFGHLLT
Sbjct: 70   ILVNAADNKQRDKTMNTIKVDIDPERNLVSIWNNGQGIPVTMHKDENMYVPTMIFGHLLT 129

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKL NIFS  F +ETA  K  K +KQ + NNMGK  +P IS
Sbjct: 130  SSNYNDDEKKVTGGRNGYGAKLCNIFSNSFTVETATRKYRKCFKQTWGNNMGKAGDPVIS 189

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
                G ++T+++F PDL KF M  L++D+VALM +R  D+A    K V V LNG +VPVK
Sbjct: 190  DF-NGTDYTRITFSPDLTKFKMESLDNDIVALMSRRAYDVAAST-KGVSVFLNGTKVPVK 247

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F +Y+D++ K+        +   +E   +RWEI    S+  FQQVSFVN IAT KGG H
Sbjct: 248  GFKDYIDLFIKNTDDDAGQPMKVVYEACGDRWEIACCPSDRGFQQVSFVNSIATTKGGRH 307

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD+V + V   ++ V+ KKNKN  ++K   V+NHLW+FVN LI+NP FDSQTKE +TL+ 
Sbjct: 308  VDHVVDNVIKQLIEVLKKKNKNGISIKPFQVRNHLWIFVNCLIENPTFDSQTKENMTLQA 367

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
             SFGSKC LSE+F+  V+ K+GIVE++L+WA FK   D+ K  G K+  ++GI KLEDAN
Sbjct: 368  KSFGSKCVLSEKFISNVS-KAGIVESVLAWAKFKAQNDIAKTGGKKSSKIKGIPKLEDAN 426

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG +NS  CTLILTEGDSAK+LA++GL V+GR+ +GVFPLRGKLLNVREA+  Q+  N+
Sbjct: 427  EAGTKNSIMCTLILTEGDSAKSLAVSGLGVIGRNYYGVFPLRGKLLNVREATFKQLTENA 486

Query: 497  EIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            EI N+ KI+GL+   +Y   +++K+LRYG +MIMTDQ                       
Sbjct: 487  EINNLCKIIGLQYKKKYLTTDDLKTLRYGKVMIMTDQ----------------------- 523

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
                 D DGSHIKGLLINFIH+ WP LL++P FL EFITPIVKA+ KN ++ SFYS+P++
Sbjct: 524  -----DQDGSHIKGLLINFIHTNWPELLRLP-FLEEFITPIVKASKKNEEI-SFYSLPEF 576

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
            E WK     N  +++IKYYKGLGTSTSKE KEYFQ++  H+  F ++   D + I +AF+
Sbjct: 577  EEWKMDTP-NHHTYNIKYYKGLGTSTSKEAKEYFQDMDRHRILFKYDGQVDDDNIVMAFA 635

Query: 674  KKKIEARKKWLLQFEPGNHLDQKE-----------------KYIKYSDFVNKELILFSMA 716
            KK +E+RK WL      NH+D+ +                 K++ YSDF+N EL+LFS A
Sbjct: 636  KKHVESRKTWLT-----NHMDEVKRRRQLGLPERYLYTKGTKHVSYSDFINLELVLFSNA 690

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D +RSIPS+VDGLKPGQRK++F  FKRN  +E KVAQ SG V+E SAYHHGE SL  TI+
Sbjct: 691  DNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLSGSVAEMSAYHHGEMSLQMTIV 750

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQ+FVGSNNINLL+P GQFGTR  GGKD ASARYIFT +SP+TR ++   DD LL Y 
Sbjct: 751  NLAQNFVGSNNINLLEPRGQFGTRLTGGKDCASARYIFTLMSPLTRLIYHPLDDPLLQYQ 810

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +DGQ+IEP WY+PIIP VLVNG+EGIGTGWS+ I NYNPR++++N+RR++NGE + P+H
Sbjct: 811  VDDGQRIEPIWYIPIIPMVLVNGAEGIGTGWSTKIANYNPRELISNLRRMINGEELLPLH 870

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYR----EFLES 952
            PWY+ F G+++  +       Y  +G I+ + +  + I ELP+  WTQ+Y+    E L +
Sbjct: 871  PWYKNFQGSMDYVSDGR----YVHSGNIQLLPDNRIEITELPVGVWTQNYKENVLEVLSN 926

Query: 953  IIDQNDSFIRGFRQYSDDTTVDFEVFLS--EESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
              ++  + I  +R+Y  DTTV F V  +  E   +R++  G  +  KL++++ST+ MH F
Sbjct: 927  GTEKVKAVISEYREYHTDTTVRFVVSFAPGEFERLRSEPGGFHRVLKLSSSLSTNQMHAF 986

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    ++++ +P+ IL+EF+ +RLE+Y +RK   +  L  +  +L ++ RFIL     ++
Sbjct: 987  DENNCLRRFPSPKDILQEFYKLRLEYYNRRKDYLVGQLTAQSDRLSDQARFILEKCEKKL 1046

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP-----------------KNSKSIEAVVAGATDETEES 1113
             + N++R  ++ EL ++G+ P P                  +    +     AT  +++ 
Sbjct: 1047 TIENKQRKAMIEELIKRGYRPDPVKEWQRRIKMEEAEAADDDDDEEDEGAESATTSSKKV 1106

Query: 1114 EENPEVVNGVQSI----DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESL 1169
            ++  +     Q +     +DYLL M++  LT E+   LL  RD    E+D+L K  P  L
Sbjct: 1107 KKEVDPEKAFQKLTEVKKFDYLLGMSMWMLTEERKNELLKQRDLKLAELDNLIKKMPTHL 1166

Query: 1170 WVKDLDALDMQLD-------------ELDKSDARAEEERMKIKGN------GNGDAGPKI 1210
            W+ DLD L+ +L+              L ++ A   ++   I+G       GN D  P  
Sbjct: 1167 WMDDLDNLEAKLNEVEEKERLEEQGINLKQAKAIKGQKPATIRGKKGKAAAGNADIFPDP 1226

Query: 1211 VAKR---------------APKNARKNDKKSNNARAT--EAMGEMDNVTKVVK------- 1246
            + +R               A   A K  +++   +    E + E+D+   +V+       
Sbjct: 1227 IGERVAFKITDDIIKKFQAATIIAVKAKERNTKVKMVKKETVEEVDDFDVLVEGGATKTS 1286

Query: 1247 PKGRAG--LKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSG---VMETE 1301
            PK +    LKK PAEK    +++    LKQ   KL+   A    + SPD+S     MET 
Sbjct: 1287 PKAKKAPVLKKEPAEKKPRQKKENGDGLKQ--PKLDFSKAKGSKKDSPDESSGDVEMETL 1344

Query: 1302 KVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIAAPEEGKK-GGRKAAGN 1360
            +V+ P        R AA KK+        +   ++ DDE    AA   G    G +   +
Sbjct: 1345 RVERPG-------RRAASKKI--------DYSFLLSDDEGGTEAASAPGNNDDGDEDIDD 1389

Query: 1361 SKAAKPAAETKKR 1373
            S   +PAA  ++R
Sbjct: 1390 SPIKRPAAAKRQR 1402


>gi|50551479|ref|XP_503213.1| YALI0D23969p [Yarrowia lipolytica]
 gi|49649081|emb|CAG81413.1| YALI0D23969p [Yarrowia lipolytica CLIB122]
          Length = 1537

 Score = 1156 bits (2990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 592/1216 (48%), Positives = 806/1216 (66%), Gaps = 68/1216 (5%)

Query: 12   SNNANVVGPTAPNK----TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT 67
            ++NA V  P    K    +  E YQK +QLEHIL RPDTYIGS+E     +W++ + +  
Sbjct: 84   NDNAPVPSPKGTPKGKKGSASEQYQKLTQLEHILKRPDTYIGSVEATASPMWVWNQTTSA 143

Query: 68   MIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEI 127
            + H+ ++ VPGLYKIFDEILVNAADNK RDPKMD+++V ID + + ISV N+G G+PVEI
Sbjct: 144  LEHKMVTIVPGLYKIFDEILVNAADNKIRDPKMDSLEVTIDADKNEISVMNNGKGIPVEI 203

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
            H +E +Y+PELIFG+LLTSSNY+DN KK  GGRNG+GAKL NIFSTEF +ETAD K  K 
Sbjct: 204  HDKEKIYIPELIFGNLLTSSNYNDNEKKVVGGRNGFGAKLCNIFSTEFKLETADQKNGKI 263

Query: 188  YKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
            Y Q ++NNM K  +P I + K    +TKV+FKPDL  FNMT L+ D V ++ +RV D+AG
Sbjct: 264  YTQTWSNNMSKVDKPKIKELKTKKEYTKVTFKPDLKLFNMTELDADTVGVLMRRVYDIAG 323

Query: 248  CLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR------------FHERVNERWEICVTL 295
                 VKV+LNG R+ +K F  YVD+Y KS+               HE VN+RWE+   +
Sbjct: 324  TT-HGVKVKLNGTRLALKDFKAYVDLYLKSLVADEDNEVVQKSKIVHEIVNDRWEVAFAV 382

Query: 296  SEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFV 355
            S+G +Q VSFVN IAT  GGTHV+Y+A+Q+   + A   KK K+A VK   +K ++++F+
Sbjct: 383  SDGTYQNVSFVNSIATTSGGTHVNYIADQLVAKLTATAKKKLKDAQVKPAQLKANMFIFI 442

Query: 356  NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
            N LI+NPAF SQTKE +T + S+FGSKCELS++F+K+VT  + I+E +LS A       L
Sbjct: 443  NCLIENPAFTSQTKEQMTTKVSAFGSKCELSDKFIKQVTNNTDIMERVLSIAGRNADAAL 502

Query: 416  KKNDG-TKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGV 474
            KK DG +K + +  + KLEDA LAG +   +CTLILTEGDSA  +A AGLSV+GR+R+G 
Sbjct: 503  KKTDGSSKKKRITTLVKLEDAQLAGTKRGHECTLILTEGDSAMTMANAGLSVIGRERYGA 562

Query: 475  FPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLA 534
            FPLRGK+LNVREAS++Q++ N+EI  IK+I+GL+    Y + K LRYGHLMIMTD     
Sbjct: 563  FPLRGKMLNVREASTDQIMKNAEIQAIKEIIGLQHKKHYTSCKDLRYGHLMIMTD----- 617

Query: 535  PLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPI 594
                                   QDHDGSHIKGL+INF+ + +P LL+IP FL+EFITPI
Sbjct: 618  -----------------------QDHDGSHIKGLIINFLETMFPGLLQIPGFLLEFITPI 654

Query: 595  VKATNKNG----KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNI 650
            VK     G    K + FY+MP+YEAW++   G   +W+ KY+KGLGT+ + +  EYF+++
Sbjct: 655  VKVMVMRGKKVVKTIPFYNMPEYEAWRD-FEGQQCTWTSKYFKGLGTTPTADATEYFKDL 713

Query: 651  TLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKEL 710
              H K F     +D   IELAFSKKK + RK+WL +++PG HLD K  +I  SDF+NKEL
Sbjct: 714  DRHMKQFHAVTAEDRPFIELAFSKKKADDRKEWLRKYKPGTHLDPKLTHIPVSDFINKEL 773

Query: 711  ILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQS 770
            ILFSMAD  RSI S+ DG KPGQRK+LF SFKR F    +VAQ  GY+SEH+ YHHGE S
Sbjct: 774  ILFSMADNMRSIASVCDGFKPGQRKVLFGSFKRKFTVSIRVAQLVGYISEHTGYHHGEAS 833

Query: 771  LASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDD 830
            L STI+ MAQDF GSNNI L++P+G FG+R+QGGKDAA+ RY  T L  IT+ +F K D+
Sbjct: 834  LGSTIMAMAQDFAGSNNIYLMKPDGGFGSRSQGGKDAAAMRYAQTELMDITKAIFNKQDE 893

Query: 831  KLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE 890
             L +Y+ +D   +EP +Y+P++P +LVNG EGIG+GWS+ IP YNP DIV N+RR+L  E
Sbjct: 894  PLYNYVTDDDTPVEPEYYLPVLPMLLVNGCEGIGSGWSTSIPPYNPLDIVDNLRRMLKDE 953

Query: 891  MMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREF- 949
               PM PW+RG+ G +E          Y V G+IE+V+E TL I ELP R WT   +EF 
Sbjct: 954  PPVPMIPWFRGWHGEVEPVGDGR----YKVKGLIEQVDERTLCITELPARMWTISMKEFL 1009

Query: 950  LESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
            L S+ID  +   +I  F +      V F + LSE+ M +T+Q GL ++FKL +++STSNM
Sbjct: 1010 LSSLIDSKNEKGWIEDFTE-DHGFRVKFNITLSEKEMEKTRQIGLRERFKLISSLSTSNM 1068

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVN 1067
              FD +G IKKYD+PE I++E+F +RLEFY+KRK   + + E +L KL  + RFI  +++
Sbjct: 1069 VAFDPEGRIKKYDSPEAIMKEYFPVRLEFYQKRKDRLVSDFEQQLEKLTAQARFIKLIID 1128

Query: 1068 GEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEES---------EENPE 1118
             ++ +NN+ R  L+ EL +  F  + KN + + +    A  E EE+          E  E
Sbjct: 1129 KKLNINNKGRKVLIAELSELKFPRYGKNGERLASDAKAAIAEDEEAPSDEVAEDLAEAEE 1188

Query: 1119 VVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
            +   + +  YDYLL MA+ +LT E+ + LL +RD   EE+ +L K + + +W+ DLD   
Sbjct: 1189 IHGKIPTNGYDYLLGMALWSLTKERYEKLLRERDGKEEELIELLKKSAKDIWMDDLDVFM 1248

Query: 1179 MQLDELDKSDARAEEE 1194
               ++ ++ D   +++
Sbjct: 1249 EAYEKFEEQDVEKQQK 1264


>gi|403344015|gb|EJY71343.1| DNA topoisomerase 2 [Oxytricha trifallax]
          Length = 1554

 Score = 1156 bits (2990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1258 (48%), Positives = 837/1258 (66%), Gaps = 72/1258 (5%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K++E++YQKK+QLEH+LLRPDTY+GS EK  Q LWI++E+++    + ISY P LYKIFD
Sbjct: 4    KSVEKIYQKKTQLEHVLLRPDTYVGSTEKIDQILWIFDEKTEKFKEKKISYTPALYKIFD 63

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG--- 141
            E+LVNAADN QRD K   +KV I+Q  + IS++N+G  VPV IH+E   YVPEL+FG   
Sbjct: 64   EVLVNAADNYQRDKKTSQIKVNINQAKNSISIYNNGSTVPVVIHKEHKCYVPELVFGKIL 123

Query: 142  --------HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFT 193
                    HLLTSSNYDD  KKTTGGRNG+GAKLTNIFS +F +E  D K  K YKQ FT
Sbjct: 124  QKLLIHLGHLLTSSNYDDTEKKTTGGRNGFGAKLTNIFSKKFTVEIGDSKNKKHYKQEFT 183

Query: 194  NNMGKKSEPNISKCKEGDN-WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKS 252
            NN+    EP IS      N +  V+F+PDL +F M  LE+D+V L+KKRV DLAG   KS
Sbjct: 184  NNLQNVGEPTISPYSPDQNDYIIVTFQPDLKRFGMKELENDIVGLLKKRVYDLAGTSPKS 243

Query: 253  VKVELNGHRVPVKSFAEYVDMY-PKSV-TRFHERVNERWEICV-TLSEGQFQQVSFVNGI 309
            VKV LN  ++ +++F +YVD+Y  K+V  +F+E+   RWEICV  L   QFQQVSFVN I
Sbjct: 244  VKVYLNEKKLEIETFEQYVDLYFNKTVPQKFYEKCGPRWEICVAVLDLDQFQQVSFVNSI 303

Query: 310  ATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTK 369
             T++GG HV++V++Q+ N+++  + KK+K   +K   ++ +LWVF+NALI+NPAFDSQTK
Sbjct: 304  CTVRGGQHVNHVSDQIVNNLLEAIQKKHKKIELKPFQIRQNLWVFINALIENPAFDSQTK 363

Query: 370  ETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT--KTEDVR 427
            ETLT R S+FGS+C++SE+FL K+ AKSGI+E +++ A  K++  LKK  GT  K + + 
Sbjct: 364  ETLTSRLSTFGSRCDISEKFLSKI-AKSGIIEDIVAKAEMKEAMKLKKELGTGVKKKKLF 422

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
            GI KLEDANLAG   SE C LILTEGDSAK+LAM+GL VVGRDRFGVFPLRGKLLNVR+ 
Sbjct: 423  GIPKLEDANLAGTSESESCILILTEGDSAKSLAMSGLQVVGRDRFGVFPLRGKLLNVRDC 482

Query: 488  SSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
               Q+L+N EI NI KILGL  G +Y+++K+LRYG +MIM DQ                 
Sbjct: 483  GMKQILDNEEIQNIIKILGLYMGRQYDDLKTLRYGSIMIMADQ----------------- 525

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK-IPSFLVEFITPIVKATNKNGKVLS 606
                       DHDGSHIKGL+INFIH+FWPSL+K  P+F+ EF+TPI+KAT+ N + L 
Sbjct: 526  -----------DHDGSHIKGLIINFIHNFWPSLIKKFPTFVKEFVTPIIKATSHN-ECLQ 573

Query: 607  FYSMPDYEAWKESLGGNA-SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG 665
            F+++ +YE W +  G N   S+ IKYYKGLGTST+ E K+YFQ+I  H+ +F ++DD+D 
Sbjct: 574  FFTIAEYEKWAQLKGTNELKSYRIKYYKGLGTSTALEAKQYFQSIKKHQINFYYKDDKDE 633

Query: 666  EAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSM 725
            + I LAFSK K + RK WL QF P  ++D  +  + Y++FV++ELI FS+AD  RSIPS+
Sbjct: 634  DKILLAFSKTKADDRKNWLSQFNPNIYVDHSKNKLCYAEFVDQELIHFSIADNMRSIPSV 693

Query: 726  VDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGS 785
            +DGLKPGQRKILF  FKR    E KVAQ SGY++EH+AYHHGE SL  TI+ MAQDFVGS
Sbjct: 694  MDGLKPGQRKILFACFKRKLKAEIKVAQLSGYIAEHTAYHHGEISLQMTIINMAQDFVGS 753

Query: 786  NNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEP 845
            NN+NLLQP GQFGTR  GGK++AS RYI+T L+P  R LF ++DD LL Y  E+G  IEP
Sbjct: 754  NNLNLLQPIGQFGTRMMGGKESASPRYIYTNLTPFARSLFNENDDPLLKYQIEEGMGIEP 813

Query: 846  TWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGT 905
             +Y+P++P VL+NG+EGIGTGWS+YIP ++P  I+ N++R L G+    M PWY+GF G 
Sbjct: 814  EFYVPVLPLVLINGAEGIGTGWSTYIPCFSPIHIIHNIKRHLEGKPFLRMQPWYKGFTGQ 873

Query: 906  IEKTASKEAGVTYTVTGIIEEVNE-TTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGF 964
            IE   + E+G++Y   G  +   E   L I ELP+++WT++Y+ FLE +  Q D  I   
Sbjct: 874  IEPKQNDESGLSYIDKGKFKVDKERNKLIITELPLQKWTREYKNFLEELA-QKDEII-DI 931

Query: 965  RQYSDDTTVDFEVFL--SEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTP 1022
            +++  D TV FEV    S+  +     + + KKFKLT+ ++ +N+ LFD    IKKY+  
Sbjct: 932  KEFHQDNTVHFEVKFNRSKLDIGTLDDDQIEKKFKLTSNLNCTNLVLFDRNCKIKKYENE 991

Query: 1023 EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLL 1082
             QILEEFF+ RL  Y+KRK+  L+ +  +  KL NK RF+  +++G + +  +K+ D++ 
Sbjct: 992  CQILEEFFNYRLNLYKKRKESMLKIITEQYEKLSNKYRFVASIIDGSLEIYKKKKEDVVK 1051

Query: 1083 ELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS---------IDYDYLLS 1133
             L++KGF       K+ + +        ++ E  P+   G  +          DY+YLL+
Sbjct: 1052 LLKEKGF-------KTYQEIHGHQKQNLQQVENQPQEKQGKDAKKNFQLDKRQDYNYLLN 1104

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD-MQLDELDKSDARAE 1192
            M I +   +++  L    ++++E+  DL++ TPE LW  DLD +  +  D + K+D    
Sbjct: 1105 MKIFSFVEDQLVLLKTKMNEIDEKRQDLQRKTPEDLWRIDLDQVQALYEDTMSKTDKIIT 1164

Query: 1193 EERMKIKGNG-NGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKG 1249
            ++ M+IK     G  G +I  K    N ++N +  +     +   + D   +++ PK 
Sbjct: 1165 QDIMRIKHKEWEGVQGNQIQTKVERGNVQQNLRAKDLEEENKMEIDEDLTKEIIMPKA 1222


>gi|66826863|ref|XP_646786.1| DNA topoisomerase II [Dictyostelium discoideum AX4]
 gi|74997376|sp|Q55BP5.1|TOP2_DICDI RecName: Full=Probable DNA topoisomerase 2; AltName: Full=DNA
            topoisomerase II
 gi|60474622|gb|EAL72559.1| DNA topoisomerase II [Dictyostelium discoideum AX4]
          Length = 1521

 Score = 1155 bits (2989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 611/1261 (48%), Positives = 825/1261 (65%), Gaps = 111/1261 (8%)

Query: 16   NVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISY 75
            N+       K+IEE+YQKK  L+ ILLRPDTYIGS E+  + LW++E+  K M+HR +S+
Sbjct: 92   NIASSAKKGKSIEEIYQKKELLDQILLRPDTYIGSTERQEEELWVWED--KRMVHRKVSF 149

Query: 76   VPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYV 135
            VPG+YKIFDEILVNAADNKQR+  M  +KVVID+E   ISV N G G+P+++H E  +Y+
Sbjct: 150  VPGIYKIFDEILVNAADNKQREGNMKFIKVVIDREKGFISVTNDGAGIPIQVHSEHKIYI 209

Query: 136  PELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNN 195
            PELIFG+LLTSS+YDD+ K+ TGGRNG+GAKL NIFST+FI+E AD K  K YKQ FTNN
Sbjct: 210  PELIFGNLLTSSHYDDSEKRLTGGRNGFGAKLANIFSTKFIVECADSKSKKLYKQTFTNN 269

Query: 196  MGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKV 255
            M  K +P I+  +   ++TK++F P+L +F M   +DD+VAL+ KRV D+AGC   ++KV
Sbjct: 270  MRSKEDPKITSYQNKTDYTKITFYPELDRFGMVEFDDDLVALLSKRVYDIAGC-NPTLKV 328

Query: 256  ELNGHRVPVKSFAEYVDMY-------PKSVTRFHERVNERWEICVTLS-EGQFQQVSFVN 307
             LN   + ++SF +Y+++Y       PK    ++E+V++RWE+ VTLS E QF QVSFVN
Sbjct: 329  SLNDEELGIRSFEKYINLYFPDEENAPKV---YYEKVSDRWELAVTLSKESQFNQVSFVN 385

Query: 308  GIATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDS 366
             I T+KGGTHV +  + +   +   VNKKNK +A++K   +KNHL VFVN LI+NP FDS
Sbjct: 386  SICTVKGGTHVTHALSNIVTAIQEQVNKKNKGSADIKPAFIKNHLSVFVNCLIENPHFDS 445

Query: 367  QTKETLTLRQSSFGSKCELSEEFLKKVT-AKSGIVETLLSWANFKQSKDLKKN--DGTKT 423
            QTKETLT + SSFGS+CE SE+F+K+V  +KSGIV ++L +A FK    LK++   G K 
Sbjct: 446  QTKETLTSKISSFGSRCEPSEKFIKRVLDSKSGIVASILEFAQFKDQSALKRSTSSGGKK 505

Query: 424  EDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLN 483
              V  I KL+DANLAGG  SE CTLILTEGDSAK+LA AG+SVVG+D +G FPL+GKLLN
Sbjct: 506  GKV-SIPKLDDANLAGGTKSEDCTLILTEGDSAKSLATAGISVVGKDHYGAFPLKGKLLN 564

Query: 484  VREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFI 543
            VR+ S+ +V+NN EI NI  ILGLK G  Y  +  LRYGHLMIMTDQ             
Sbjct: 565  VRDQST-KVINNDEINNIVTILGLKYGKVYETLSDLRYGHLMIMTDQ------------- 610

Query: 544  LIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK 603
                           DHDGSHIKGL+IN +H FWP+LL++P FLVEFITPIVK    N K
Sbjct: 611  ---------------DHDGSHIKGLIINMVHHFWPTLLRMPGFLVEFITPIVKVFKNNQK 655

Query: 604  VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
             +SFY+MP++  W+E+   N   W +KYYKGLGTST  EGKEYF ++  HK DF W D+ 
Sbjct: 656  PISFYTMPEFLKWRET---NDKGWDVKYYKGLGTSTPGEGKEYFSDLERHKIDFEW-DEG 711

Query: 664  DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQ-KEKYIKYSDFVNKELILFSMADLQRSI 722
              + IELAFSK + + RKKW+ +   G  L+Q   K + YSDF+NKEL+LFS+AD +RSI
Sbjct: 712  ANDNIELAFSKSRADDRKKWMAEHIEGTFLEQFGVKKLTYSDFINKELVLFSIADCERSI 771

Query: 723  PSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDF 782
            P++VDGLK   RK L+  FKRN  KE KVAQ  GYVSEHSAYHHGE SL STI+GMAQ+F
Sbjct: 772  PNIVDGLKTSHRKTLYSCFKRNLKKEIKVAQLIGYVSEHSAYHHGEASLYSTIVGMAQEF 831

Query: 783  VGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQ 842
            VGSNNINLL P G +GTR  GGKD +SARYI TRL+ I R ++  DDD +L  + +DG++
Sbjct: 832  VGSNNINLLNPAGSYGTRIAGGKDCSSARYIHTRLNDIARAVYHADDDPILSCVVDDGKK 891

Query: 843  IEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGF 902
            ++P +Y+P+IP +LVNG  GIGTGWSS IPNYNPRD++ N+R  ++G+ ++P+ PWYRGF
Sbjct: 892  VQPKFYIPVIPMILVNGCVGIGTGWSSTIPNYNPRDLIQNMRLAIDGKPLKPIKPWYRGF 951

Query: 903  GGTIEKT-ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI-------- 953
             G+IE    SK  G  Y   GI +++++    I ELPI  WTQDYRE L+ +        
Sbjct: 952  LGSIEANQGSKVQGGQYLSKGIWKKLSDNRFEITELPIGFWTQDYRELLDELETPGTRKK 1011

Query: 954  ---------------------------IDQND-------SFIRGFRQYSDDTTVDFEVFL 979
                                       +D +D       + ++ +  YS ++T+ F +  
Sbjct: 1012 KKEEKEKKAASRKGTKAKPTTTKRSKRVDDDDDNEKVTEATVKSYTNYSSESTIHFII-- 1069

Query: 980  SEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEK 1039
              +++    +  + K FKL +TI+ +NM +FD +G I+++ T   + E FF +R++ Y+ 
Sbjct: 1070 --DTIQPVDEINIEKVFKLVSTINETNMVVFDEEGRIQRFATTTALQEHFFPLRIKHYQM 1127

Query: 1040 RKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTP-FPKNS-K 1097
            RK    E L  E  +L NK RFIL VVN E+V++N K+ DL+ +L++  F     KNS K
Sbjct: 1128 RKDFLSERLSEEYSRLSNKARFILAVVNKELVISNVKKVDLINKLKEMKFDRIINKNSNK 1187

Query: 1098 SIEAVV---AGATDETEESEENPEVVNGVQ------SIDYDYLLSMAIGTLTLEKVQGLL 1148
            S    +     A DE + +  + E  +G Q      +  YDYLLS+ + +LTLE+V+ L+
Sbjct: 1188 SARDKIKKKKNAFDEEDAAISSDEEKDGAQEEQDDDTKGYDYLLSLPLWSLTLERVKKLI 1247

Query: 1149 ADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGP 1208
             +RD   +E D L     + ++ +DLDAL+  LD+ D  D   + +   +K      A P
Sbjct: 1248 EERDSKKKEWDILLSTPIQEIYKRDLDALEKALDDQDAYDESLKNQTESLKKRTKTKALP 1307

Query: 1209 K 1209
            +
Sbjct: 1308 R 1308


>gi|18369816|dbj|BAB84103.1| DNA topoisomerase II [Penicillium chrysogenum]
          Length = 1423

 Score = 1155 bits (2988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/1173 (51%), Positives = 797/1173 (67%), Gaps = 66/1173 (5%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E YQK +QLEHI+ RPDTYIGS E+ TQ +W+Y   ++ M  R +S+VPGLYKIFDEI+V
Sbjct: 8    EKYQKLTQLEHIIKRPDTYIGSTERTTQQMWVYNSGTELMEFRDVSFVPGLYKIFDEIVV 67

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNK  D  M+ +++ ID+E   ISV N+G G+P+EIH +E +YVPELIFGHLLTSSN
Sbjct: 68   NAADNKHNDSSMNEIRITIDREAGEISVWNNGRGIPIEIHSKEKIYVPELIFGHLLTSSN 127

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD+ +K TGGRNG+GAKL N+FSTEF +ET D ++ KKYKQ +T NM K  +  I+  K
Sbjct: 128  YDDSQQKVTGGRNGFGAKLCNVFSTEFTLETQDSRQKKKYKQTWTENMTKMGKAKITDAK 187

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
             GD++TKV+FKPD AKF M  ++DD  +L+K+RV DLAG  G  V V+LN  RVP++SF 
Sbjct: 188  -GDDYTKVTFKPDFAKFGMEGIDDDFESLVKRRVYDLAGTAG--VAVKLNNTRVPIRSFR 244

Query: 269  EYVDMYPKSVTRFHERVNE---------------RWEICVTLSEGQFQQVSFVNGIATIK 313
            +Y++MY K++ +  ER ++               RWEI   +S+G FQQVSFVN IAT  
Sbjct: 245  KYMEMYTKAIRK--ERGDDGPPTKDEIITCSPDPRWEIGFAVSDGSFQQVSFVNSIATTS 302

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETL 372
            GGTHV+Y+A+Q+   +   V KKNK+ A +K+  ++NH+++FV ALI NPAF SQTKE L
Sbjct: 303  GGTHVNYIADQICTRLADQVKKKNKSGATLKSAQIRNHIFIFVKALIVNPAFTSQTKEQL 362

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKL 432
            T + S FGSKC L E+F KKV  K+ ++  +L +A  K   DLKK D  +   +    KL
Sbjct: 363  TTKASQFGSKCPLDEDFYKKVL-KTEVMSNILHFAEQKADPDLKKGDTGRRTRMNN-PKL 420

Query: 433  EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
             DAN AG R    CTLILTEG+SAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+
Sbjct: 421  VDANKAGTREGRHCTLILTEGESAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASFDQI 480

Query: 493  LNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              N EI +IK  +GL+   EY + K LRYGHLMIMTDQ                      
Sbjct: 481  SKNVEIQSIKNFIGLQHKKEYTDTKGLRYGHLMIMTDQ---------------------- 518

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFY 608
                  DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPI+K    +     K  SF+
Sbjct: 519  ------DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIIKVWKGDPKNPTKQKSFF 572

Query: 609  SMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA- 667
            +MP+++ W+E+   +   W  KYYKGLGTST+++ + YF+++  H K+F     QDGEA 
Sbjct: 573  TMPEHDEWREA-HQHERGWEHKYYKGLGTSTTEDAQVYFRDLDRHLKEF--HTMQDGEAG 629

Query: 668  -IELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
             IELAFSKKK + RK+WL QF+PG  LD     I Y+DF+NKELILFSMAD QRSIPS+V
Sbjct: 630  LIELAFSKKKADERKEWLRQFKPGTFLDHSGAKITYTDFINKELILFSMADNQRSIPSVV 689

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DGLKPGQRK+L   F+RN  K+ KV + +G+VS  +AYHHG+ SL  TI+G+AQ FVGSN
Sbjct: 690  DGLKPGQRKVLHTCFRRNLKKDMKVVELAGHVSGMTAYHHGDVSLQQTIVGLAQTFVGSN 749

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            NIN L+P+G FG+R QGG D ASARYI+TRLSP  R +F   D+ LL Y  +DG++IEP 
Sbjct: 750  NINCLEPSGNFGSRLQGGGDCASARYIYTRLSPFARKVFHSADEPLLTYNEDDGKKIEPE 809

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI 906
             +MP++P +L+NG++GIGTGWSS IPNYNP ++V N++RL+ GE  EPM PW+RGF G +
Sbjct: 810  VFMPVVPMILINGADGIGTGWSSSIPNYNPEEVVNNLKRLMAGEPTEPMQPWFRGFTGEV 869

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGF 964
                    G  +  +GII E  E  + I ELPIR WTQD+++ LE II  ++  SFI+ +
Sbjct: 870  VAV----GGDRFKFSGIIRECGEKEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDY 925

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
            R Y+  T V F + L E+ M     EGL +KFKLT TI+T+N+  FD +G I KY T + 
Sbjct: 926  RDYNTHTKVHFIIQLDEKHMKVALTEGLEEKFKLTKTIATTNLVAFDPEGRITKYATVDD 985

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            IL+EFF +RL++YE+RK+ QL +L+ +L KL N+ RF+  +++G++V++ +KR DL+ EL
Sbjct: 986  ILKEFFVVRLKYYERRKQFQLADLQRDLEKLSNQARFVQMIIDGKLVISKKKRPDLIAEL 1045

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            + KGF P  K +++ +        E E  EE+ +      S  +DYLLSM + +LT E+V
Sbjct: 1046 KDKGFKPISKVAEAPKMGEDEPVVEEEGEEESDDNDTQKLSSSFDYLLSMPMWSLTQERV 1105

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            + L         EVD L K + E +W +DLD L
Sbjct: 1106 EKLRRQIGDKETEVDVLIKLSKEDIWTRDLDEL 1138


>gi|219121760|ref|XP_002181228.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407214|gb|EEC47151.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1143

 Score = 1155 bits (2987), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 599/1184 (50%), Positives = 806/1184 (68%), Gaps = 76/1184 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+EE YQK SQLEHIL+RPDTYIGS+E HT+ ++I E++   +I + I+Y PGL+KIFD
Sbjct: 3    KTVEETYQKMSQLEHILIRPDTYIGSVEPHTKLMFILEDDK--IIEKEITYTPGLFKIFD 60

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EI+VNAADNKQRDP MD + V I+ E ++IS+ N+G G+P+ +H+E G+YVPELI GHLL
Sbjct: 61   EIVVNAADNKQRDPNMDKLDVTINAEENVISIQNNGKGIPIVMHKEHGIYVPELILGHLL 120

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            T SN+DD  +KTTGGRNGYGAKL N+FSTEF++E AD +   KY+QVF  NM +K +P +
Sbjct: 121  TGSNFDDGERKTTGGRNGYGAKLANVFSTEFVVECADTENGLKYRQVFRENMKQKDKPVV 180

Query: 205  ----SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCL----GKSVKVE 256
                +K  +  ++ K++F PDL +F M  L++D V L+ KR  D+AG +    GK + V 
Sbjct: 181  KALTAKEMKAADYVKITFSPDLERFKMDRLDEDTVGLLSKRAYDIAGTMSQSSGKKLLVS 240

Query: 257  LNGHRVPVKSFAEYVDMY-----PKSVTRFHERVNERWEICVTLSE-GQFQQVSFVNGIA 310
            LNG ++P+KSF +++ ++     P +        ++RWE+ V  S+    +QVSFVN I+
Sbjct: 241  LNGKKLPIKSFKDFIGVFEGINKPSAFETVRLANSDRWEVGVAASDDAAMKQVSFVNSIS 300

Query: 311  TIKGGTHVDYVANQVANHVMAVVNKKNKNAN-VKAHNVKNHLWVFVNALIDNPAFDSQTK 369
            T KGGTHV Y+A+QVA+H+   + KKNK    VKA  +KNHL +FVN LI+NPAFDSQTK
Sbjct: 301  TSKGGTHVQYIADQVASHLAKAITKKNKKGGEVKASFIKNHLAIFVNCLIENPAFDSQTK 360

Query: 370  ETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGI 429
            E +T +   FGS C+LS+ FLKK+  KS IVE +L+++ F+  + LK   G K   + GI
Sbjct: 361  EFMTSKPKDFGSTCKLSDSFLKKL-EKSAIVENVLAFSQFRDRQALKNKSGKKKAKLTGI 419

Query: 430  SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS 489
             KL+DAN AG   S+ CTLI+TEGDSAK+LAMAGLSV+GRD +GVFPLRGK LNVR+A  
Sbjct: 420  DKLDDANFAGTAKSKDCTLIITEGDSAKSLAMAGLSVIGRDYYGVFPLRGKPLNVRDAPI 479

Query: 490  NQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
              V +N EI N+ +I+GLK    Y+  N+K LRYGHLMIM DQ                 
Sbjct: 480  KAVTSNEEIKNVVEIMGLKFQTVYDETNIKQLRYGHLMIMADQ----------------- 522

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSF 607
                       D+DGSHIKGL+INFIH+FWPSLL IP FL +FITPIVK + K  K  SF
Sbjct: 523  -----------DNDGSHIKGLIINFIHNFWPSLLDIPGFLQQFITPIVKVS-KGQKSQSF 570

Query: 608  YSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG-E 666
            +++P+YE W ES G N   W IKYYKGLGTSTS E KEYF N+ LH  + + +  Q G +
Sbjct: 571  FNLPEYENWLESTGKNGHGWKIKYYKGLGTSTSAEAKEYFSNLDLH--EVLPDTVQSGND 628

Query: 667  AIELAFSKKKIEARKKWLLQFEPGNHLDQKE---KYIKYSDFVNKELILFSMADLQRSIP 723
             I++ F K ++E RK+WL        L+  E   + + YS+F+N+E ILFS +D +RSIP
Sbjct: 629  LIDMVFRKNRVEDRKQWLNAIAKDTFLNYSEVSKEGVMYSEFINREYILFSKSDNERSIP 688

Query: 724  SMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFV 783
             ++DG KP QRKILF  FKR    E KVAQ +GYV+EHSAYHHGE SL +TI+ MAQ+F 
Sbjct: 689  HLLDGFKPSQRKILFACFKRKLKGEIKVAQLTGYVAEHSAYHHGEASLQATIVNMAQNFC 748

Query: 784  GSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQI 843
            GSNNINLL P+GQFGTR  GGKDAASARYIFT+L PITR +F  DDD+LL Y+N+DG  +
Sbjct: 749  GSNNINLLTPSGQFGTRRMGGKDAASARYIFTKLEPITRAIFHPDDDELLSYINDDGVTV 808

Query: 844  EPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFG 903
            EP +Y+P+IP +LVNG++GIGTGWS+ + NYNPR+IV N+RR + GE    M P+Y GF 
Sbjct: 809  EPEYYVPVIPMILVNGADGIGTGWSTSVNNYNPREIVRNLRRKIAGEDFVAMAPFYSGFK 868

Query: 904  GTI--EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSF- 960
            G I    + S+ +G +Y + G +E +N+TT+ I ELP+R+WTQDY+ FLE ++  +    
Sbjct: 869  GEIIPVDSNSRRSG-SYDMLGKVERINDTTIIISELPVRKWTQDYKAFLEIMLTGDGKKK 927

Query: 961  ---IRGFRQYSDDTTVDFEVFLSEESMMRTKQE--GLLKKFKLTTTISTSNMHLFDSKGV 1015
               I+ F +   +TTV F +   +E +   ++E  GL+ KFKLT ++STSNM LFD +G 
Sbjct: 928  LPEIKDFTENHTETTVSFTIIAEKEKIDEFEKEKAGLMGKFKLTGSLSTSNMTLFDERGR 987

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            I +++ PE I+  F+ IRL+FY+KRK++ ++ L+ E  KL NK RF+  V   E+VVNNR
Sbjct: 988  ITRFEDPESIMNAFYDIRLDFYDKRKRLLVKKLKEEQRKLSNKARFVEEVCRVELVVNNR 1047

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVA-GATDETEESEENPEVVNGVQSIDYDYLLSM 1134
            KR D+L ELR +G+  F  +++S E   + G  D   ES+ + E+  G     Y+YLL M
Sbjct: 1048 KRQDILHELRNRGYETFGADARSKETSDSDGEEDSINESQSDAELARG-----YEYLLGM 1102

Query: 1135 AIGTLTLEKVQGLLADRDKLNE---EVDDLRKATPESLWVKDLD 1175
             I +LT EK + L   R KL E   E++ L+  +P  LW+ DLD
Sbjct: 1103 KIWSLTFEKAEEL---RRKLGEKTTELNALQGTSPSELWLNDLD 1143


>gi|270004896|gb|EFA01344.1| topoisomerase II [Tribolium castaneum]
          Length = 1547

 Score = 1155 bits (2987), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1276 (49%), Positives = 833/1276 (65%), Gaps = 107/1276 (8%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            +TIEE YQKKSQLEHILLRPDTYIGS+EK  + +W+Y+ +++ +I + ISYVPGLYKIFD
Sbjct: 31   QTIEETYQKKSQLEHILLRPDTYIGSVEKVDENMWVYDRDTEMIIQKNISYVPGLYKIFD 90

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRD  MD +K+ I+Q+ ++ISV N+G G+PV +H+ E +YVP +IFGHLL
Sbjct: 91   EILVNAADNKQRDNTMDCIKIEINQDDNVISVWNNGQGIPVAMHKSENMYVPTMIFGHLL 150

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNY+D  +K TGGRNGYGAKL NIFST+F +ETA  +  + +KQV+ NNM K SEP I
Sbjct: 151  TSSNYNDKEEKVTGGRNGYGAKLCNIFSTKFTVETATKEYKRHFKQVWGNNMTKASEPKI 210

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
             K   G+++TK++F PDL KF M  LEDD+V+LM +R  D+A    + VKV LNG RVPV
Sbjct: 211  -KDHFGEDFTKITFSPDLVKFKMEKLEDDIVSLMCRRAFDVAAST-RGVKVFLNGKRVPV 268

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            K+F +YVD + K             +E  NERWE+ +TLS+  FQQ+SFVN IAT KGG 
Sbjct: 269  KNFKDYVDFFTKGKDEDGNEKCKVVYEVCNERWEVAMTLSDRGFQQMSFVNSIATTKGGR 328

Query: 317  HVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV   +   ++ V+ K+NK    +K   VKNH+W+F+N LI NP FDSQTKE +TL+
Sbjct: 329  HVDYVTEMIVKQIIEVLKKRNKGGVAIKPFQVKNHMWIFINCLIVNPTFDSQTKENMTLQ 388

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC LSE+F+ +V  KSGIVE++LSWA FK   +L KK  G K   ++GI KLED
Sbjct: 389  AKSFGSKCTLSEKFITQV-VKSGIVESVLSWAKFKAQTELEKKTAGKKQSKLKGIPKLED 447

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG +N  +CTLILTEGDSAK+LA++GL V+GRD +GVFPLRGKLLNVREA+  Q+L 
Sbjct: 448  ANEAGTKNGLRCTLILTEGDSAKSLAVSGLGVIGRDYYGVFPLRGKLLNVREATHKQILE 507

Query: 495  NSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N EI N+ KILGL+   +YN   ++++LRYG +MIMTD                      
Sbjct: 508  NQEINNLIKILGLQYKKKYNTDEDMRTLRYGKVMIMTD---------------------- 545

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                  QD DGSHIKGLLINFIH  WP LL+   FL EFITPIVKA  +N + LSFYS+P
Sbjct: 546  ------QDQDGSHIKGLLINFIHYNWPELLR-RDFLEEFITPIVKAKKRN-ETLSFYSLP 597

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            ++E WK S   N  ++ IKYYKGLGTS SKE KEYF ++  H+  F ++  +D + I LA
Sbjct: 598  EFEEWK-SNTPNHRTYQIKYYKGLGTSDSKEAKEYFSDMARHRIRFRYKGPEDDDHIVLA 656

Query: 672  FSKKKIEARKKWLLQF----EPGNHLDQKEKY--------IKYSDFVNKELILFSMADLQ 719
            FSKK IE RK+WL  F         L   EKY        + Y+DFVN EL+LFS AD  
Sbjct: 657  FSKKHIEHRKEWLTNFMVESRRRKELGLAEKYLYAKDTKSVSYTDFVNLELVLFSNADNI 716

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIP +VDGLKPGQRK++F  FKRN  +E KVAQ +G V+E SAYHHGE SL  TI+ +A
Sbjct: 717  RSIPCLVDGLKPGQRKVMFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEVSLCMTIVNLA 776

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLL+P GQFGTR  GGKD+AS RYIFT++SP+TR +F   DD LL +  ED
Sbjct: 777  QNFVGSNNINLLEPRGQFGTRMAGGKDSASPRYIFTKMSPLTRMIFNPSDDYLLKHEFED 836

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q+IEP WY+PIIP VLVNG++GIGTGW + IPNYNPR++V N+R +L+ E    M PWY
Sbjct: 837  NQKIEPVWYIPIIPMVLVNGADGIGTGWMTKIPNYNPRELVKNIRAMLDQEEPTNMVPWY 896

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQND 958
            + F G+I           Y  +G I  + +  + I ELPI  WTQ+Y+E  LE ++  ++
Sbjct: 897  KNFIGSIVDCGDNR----YVASGEIAIIGDNRVEITELPIGTWTQNYKENVLEPLLHGSE 952

Query: 959  ---SFIRGFRQYSDDTTVDFEV-FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
               + I+ +++Y+ DTTV F + FL  +      + GL K FKL + ISTS+M +FD  G
Sbjct: 953  KVKAVIQDYKEYNTDTTVKFIITFLPGQLETLENEAGLHKTFKLQSLISTSSMCVFDELG 1012

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             I++YD+   IL++++ +RL  Y+KRK      L+ E  KL N+ RFI+   +  +VV N
Sbjct: 1013 CIRRYDSVTDILKDYYKLRLTMYQKRKDYLEGMLKAEASKLSNQARFIMEKCDRTLVVEN 1072

Query: 1075 RKRTDLLLELRQKGFTPFP-KNSKSIEAVVAG------------ATDETEESEENPEVV- 1120
            +KR  ++ EL ++G+ P P K+ K   A   G            AT++T +   +PE   
Sbjct: 1073 KKRKVIIDELIKRGYEPDPVKDWKQRVATEDGDEEAPAEEEEAPATEQTTKKPVDPEKAF 1132

Query: 1121 -NGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
             N      +DYLL M++  LT EK   LL  RD   +E++ L+K T   LW +DLDA   
Sbjct: 1133 QNSTDVQKFDYLLGMSMWMLTEEKKNELLRQRDIKLQELETLKKKTHCDLWREDLDAFME 1192

Query: 1180 QLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMD 1239
            +LDE++      E+ER       N +AG K      PK A+   KK N A    +     
Sbjct: 1193 KLDEVE------EKER-------NDEAGIK------PKKAQAGRKKINLAETMPS----- 1228

Query: 1240 NVTKVVKPKGRAGLKK 1255
             + K V+PK    +KK
Sbjct: 1229 PIAKRVEPKISDDMKK 1244


>gi|25006387|dbj|BAC24013.1| DNA topoisomerase II [Arthroderma otae]
          Length = 1087

 Score = 1154 bits (2986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/1124 (52%), Positives = 781/1124 (69%), Gaps = 59/1124 (5%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +SYVPGLYKIFDEILVNA
Sbjct: 2    YQKITQLEHILKRPDTYIGSVERTEKQMWVYNSTTELMEYREVSYVPGLYKIFDEILVNA 61

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ DP M+ ++V +D+E   ISV N+G G+PVE+H +E +Y+PELIFGHLLTSSNY+
Sbjct: 62   ADNKQNDPNMNEIRVTLDKEGGEISVWNNGRGIPVEVHSKEKIYIPELIFGHLLTSSNYN 121

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  +K TGGRNGYGAKL NIFS EF IETAD +  KK+K  +TNNM    +P I++CK G
Sbjct: 122  DQQEKVTGGRNGYGAKLCNIFSNEFTIETADSRTKKKFKLTWTNNMSAMGKPKITECK-G 180

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG ++PVKSF +Y
Sbjct: 181  DDYTKVTFKPDFAKFGMEGMDDDFEALVKRRVYDMAGTCGTAVK--LNGTKIPVKSFKKY 238

Query: 271  VDMYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++MY K++                 E  + RWEI  T+S+G FQQVSFVN IAT  GGTH
Sbjct: 239  MEMYTKAIKTERGEDPTSDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTH 298

Query: 318  VDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN  I NPAF SQTKE LT R 
Sbjct: 299  VNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNCQIVNPAFTSQTKEQLTTRS 358

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSKC +S+EFLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN
Sbjct: 359  SQFGSKCIVSDEFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDAN 416

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG +    CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+
Sbjct: 417  KAGTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNA 476

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI NIK  +GL+   EY + + LRYGHLMIMTDQ                          
Sbjct: 477  EIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ-------------------------- 510

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPD 612
              DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++P+
Sbjct: 511  --DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHSKSFFTLPE 568

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            YE WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAF
Sbjct: 569  YEEWKET-HAHDKKWQKKYYKGLGTSSTEDAQIYFQDLDKHLKQFHTLQDKEAELIELAF 627

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            SKKK + RK+WL QF+PG +LD   + I YSDF+NKELILFSMAD  RSIPS++DGLKPG
Sbjct: 628  SKKKADERKEWLRQFKPGTYLDHSTEQITYSDFINKELILFSMADNIRSIPSVIDGLKPG 687

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+
Sbjct: 688  QRKVLYTMFKRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLE 747

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P+G FG+R QGG D+ASARYI+TRLSP  R LF   D+ LL    +DG+ IEP  Y+P++
Sbjct: 748  PSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHPADEPLLVNNTDDGKVIEPETYVPVV 807

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P +L+NG++GIGTGWS+ IPNYNP D+VAN++RL+ GE + PM PW+RGF G  E T S 
Sbjct: 808  PLILINGADGIGTGWSTSIPNYNPEDVVANLKRLMAGEELVPMKPWFRGFKG--EVTGS- 864

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDD 970
              G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  D+  SFI+ ++ Y+  
Sbjct: 865  --GDRYKFSGIIKQTGDNEVEITELPIRTWTQDFKDRLEEIIKADKVPSFIKDYKDYNTH 922

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            T V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL+ F+
Sbjct: 923  TNVHFIIQMDEKHMKKALEEGLEEKFKLIKPIATSNMVAFDAEGRITRYETPEDILQAFY 982

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +R++ YE+RK+  L  L+ +L KL N+ RF+  +++G++V++ +K+T L+ EL+ K F 
Sbjct: 983  AVRIKLYERRKQHLLSQLQSQLDKLSNQARFVQMIIDGKLVISKKKKTILIQELKDKAFK 1042

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSM 1134
            PFPK + + ++      +  E+ EE       + S  YDYLLSM
Sbjct: 1043 PFPKVADTAKSDEVDDEEGEEDEEEEGNSDAVLSSDAYDYLLSM 1086


>gi|345563425|gb|EGX46426.1| hypothetical protein AOL_s00109g184 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1586

 Score = 1154 bits (2984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/1188 (50%), Positives = 790/1188 (66%), Gaps = 83/1188 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQ EH+L+RPDTYIGSIE+    +WI+ ++   M++  +S+VPGLYKIFDEI+VNA
Sbjct: 136  YQKLSQEEHVLIRPDTYIGSIERTESKMWIHNQDEDRMVYSEVSFVPGLYKIFDEIIVNA 195

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M+ +KV +D+E   ISV+N+G G+P++IH +  +Y+PE+IFGHLLT SNY+
Sbjct: 196  ADNKIRDPSMNMLKVELDREKGTISVYNNGSGIPIQIHDKTKIYIPEMIFGHLLTGSNYN 255

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            DN KK  GGRNG+GAKL NIFSTEFI+ETAD K  +KYKQV+ NNM    +  I    + 
Sbjct: 256  DNEKKVVGGRNGFGAKLCNIFSTEFILETADKKSKQKYKQVWRNNMKVCEKAIIKPMAKA 315

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            + +TKV+FKPDL KF MT ++    +L+++RV DLAGC  + +KV  NG ++ +K F  +
Sbjct: 316  EEYTKVTFKPDLEKFGMTEIDSHFESLVRRRVYDLAGCC-RDLKVYYNGDQIKIKDFKTF 374

Query: 271  VDMYPKSVTR------------------FHERVNERWEICVTLSEGQFQQVSFVNGIATI 312
            + ++  S+ R                   +ERVN+RWEI   +S+G FQQVS+VN IAT 
Sbjct: 375  MQLHVDSILREKQESGAILELDSKPPVIAYERVNDRWEIGFAVSDGTFQQVSYVNSIATT 434

Query: 313  KGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETL 372
             GGTHV+YVA+++ N + A + K+   A +K   +KNH ++F+N LI+NPAF SQTKE L
Sbjct: 435  SGGTHVNYVADRIVNRLNAEMKKQKALAALKPAQIKNHFFLFINCLIENPAFTSQTKEQL 494

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKL 432
            T R ++FGS CE+S+ FL KV  +SGI E L   A  K    LKK DG++   +   SKL
Sbjct: 495  TTRPNAFGSACEISDAFLTKVV-RSGIKEALSDTAQTKTDALLKKTDGSRRARIVN-SKL 552

Query: 433  EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
             DAN AG ++  QCTLILTEGDSAKALAM+G+ VVGRD FGVFPLRGK+LNVR+A ++Q+
Sbjct: 553  VDANKAGTKDGWQCTLILTEGDSAKALAMSGMEVVGRDLFGVFPLRGKMLNVRDAPADQI 612

Query: 493  LNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
              N+EI NIK+ILGL+    Y+  N+K LRYGHLMIMTDQ                    
Sbjct: 613  AKNAEIQNIKQILGLQHKKTYDEKNIKDLRYGHLMIMTDQ-------------------- 652

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA----TNKNGKVLS 606
                    DHDGSHIKGLLINF+ + + SLLKI  FL+EFITPIVKA      K  K  +
Sbjct: 653  --------DHDGSHIKGLLINFLDAQFASLLKIDGFLLEFITPIVKAYKGVVTKPTKSRA 704

Query: 607  FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
            F++MP+YE WKE+       W  KYYKGLGTS+S E KEYF ++  H K+F     ++  
Sbjct: 705  FFTMPEYEEWKET--NTEKGWQTKYYKGLGTSSSAEAKEYFSDLDKHLKEFHSMKLEERG 762

Query: 667  AIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
             I++ FSKKKIE RK+WL Q+ PG +LD   + I Y DF+NKELILFSMAD  RSIPS +
Sbjct: 763  LIDMVFSKKKIEERKEWLRQYRPGVYLDHSIEKISYDDFINKELILFSMADNIRSIPSAI 822

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DGLKPGQRK+LF  FK+   KE KV   +GYV +H+ Y HG+ SLA TI+ +AQ FVGSN
Sbjct: 823  DGLKPGQRKVLFGCFKKKLSKEVKVQSLAGYVLDHTHYQHGDVSLAQTIIALAQTFVGSN 882

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            N+N+L+P G FG+R  GGKDAASARYI T LSP  R LFP  DD +L+Y  EDG +IEP 
Sbjct: 883  NVNILEPIGNFGSRLGGGKDAASARYISTMLSPFARALFPAADDAILEYNYEDGDKIEPN 942

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI 906
            WY P++P +L+NGS+GIGTGWSS IPNYNP D+  N+RRLL+ + +EPM PWYRGF G +
Sbjct: 943  WYAPVLPLILMNGSDGIGTGWSSSIPNYNPEDVAMNIRRLLDDQDLEPMQPWYRGFKGRL 1002

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND-------- 958
            E+   ++    Y  +GII +VN+TT+ I ELP+R WTQ+++E L+ II   +        
Sbjct: 1003 ERLTPEK----YQFSGIINQVNDTTVEITELPVRLWTQEFKEKLDDIIKPPEKDGKDKDK 1058

Query: 959  -------SFIRGFRQYSDDTTVDFEVFL-SEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
                   ++I+ +  Y+ D  V F V L S+ SM    +EGL  +FKL  T ST+NM  F
Sbjct: 1059 KVTKVEKAWIKDYLDYNSDLRVHFIVELDSKASMEAALKEGLETRFKLNKTASTTNMVAF 1118

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D++G + +Y+TPE IL+EF+ +RL+ Y+ RK   L  L  +L KL N+ RF+  ++  E+
Sbjct: 1119 DAQGRLTRYETPEDILKEFYFVRLKLYQSRKDYLLGELNKQLRKLTNQARFVQMIIKKEL 1178

Query: 1071 VVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID-YD 1129
            VV+N+KR  L+ ELR + F      S   EA  +G T+     EEN E+  G    D ++
Sbjct: 1179 VVSNKKRAVLIAELRSQKFDVI---SNKKEAEESGETEPI--VEENEEITGGDDVGDGFN 1233

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            YLL M I +LT EKV+ LLA+      E+D L K +P+ LW +DLD  
Sbjct: 1234 YLLGMPIWSLTKEKVEKLLAECGTKEGEIDTLAKRSPKDLWREDLDVF 1281


>gi|307211209|gb|EFN87409.1| DNA topoisomerase 2 [Harpegnathos saltator]
          Length = 1492

 Score = 1154 bits (2984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1206 (49%), Positives = 812/1206 (67%), Gaps = 83/1206 (6%)

Query: 16   NVVGPTAP-NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTIS 74
            N  G + P  KTIE +YQKKSQLEHILLRPDTYIGS+E  T+ +WI+++E   M+ + I 
Sbjct: 7    NGAGDSGPKQKTIEGIYQKKSQLEHILLRPDTYIGSVEPVTEMMWIFDKEKDMMVQKDIK 66

Query: 75   YVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVY 134
            YVPGLYKIFDEILVNAADNKQRDPKMD +K+ ID E++ ISV N+G G+PV IH+EE +Y
Sbjct: 67   YVPGLYKIFDEILVNAADNKQRDPKMDMIKIDIDSENNTISVWNNGKGIPVVIHKEENMY 126

Query: 135  VPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTN 194
            VP +IFGHLLTSSNYDD  +K TGGRNGYGAKL NIFS  F +ETA  +  K  KQ + N
Sbjct: 127  VPTMIFGHLLTSSNYDDEEEKVTGGRNGYGAKLCNIFSHRFTVETATKEYRKSLKQTWGN 186

Query: 195  NMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVK 254
            NMGK SEP I K   G+++TKV+F PDL+KF M  L++D+VALM +R  D+A    K VK
Sbjct: 187  NMGKASEPRI-KEYHGEDFTKVTFSPDLSKFKMQSLDEDIVALMSRRAYDVAAS-SKGVK 244

Query: 255  VELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFV 306
            V LNG RVPVK+F +Y+D Y K         +   +E    RWE+ +TLS+  FQQ+SFV
Sbjct: 245  VYLNGTRVPVKNFKDYIDFYIKGKEDDVGNPLKIIYENCGPRWEVAITLSDKGFQQMSFV 304

Query: 307  NGIATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFD 365
            N IAT KGG HVD+V   +   ++  + KKNK    +K   +KNHLW+F+N LI+NP FD
Sbjct: 305  NSIATTKGGRHVDHVTELIVKQLIETLKKKNKAGVAIKPFQIKNHLWIFINCLINNPTFD 364

Query: 366  SQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK-NDGTKTE 424
            SQTKE +TL+  SFGSKC L+++F+  +T K GIVE +L+WA FK    L+K    +K  
Sbjct: 365  SQTKENMTLQAKSFGSKCTLTDKFIANIT-KIGIVEAVLTWAKFKADSQLQKLGPKSKQR 423

Query: 425  DVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNV 484
             ++GI KLEDAN AG   S +CTLILTEGDSAK +A++G++ +GRD++G+FPLRGK+LNV
Sbjct: 424  KLQGIPKLEDANDAGTGKSLECTLILTEGDSAKTMAVSGIASIGRDKYGIFPLRGKMLNV 483

Query: 485  REASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLW 541
            REA+  Q+L N+EI N+ KILGL+   +Y   +++K+LRYG +MIMTDQ           
Sbjct: 484  REATHKQILENAEINNLIKILGLQYKKKYETRDDLKTLRYGKMMIMTDQ----------- 532

Query: 542  FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
                             D DGSHIKGLLINFIH  WPSLLK+ +F+ EFITPIVKAT  N
Sbjct: 533  -----------------DQDGSHIKGLLINFIHHNWPSLLKL-NFIEEFITPIVKATKGN 574

Query: 602  GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWED 661
             + LSF+S+P++E WK+    N  ++ IKYYKGLGTST+KE KEYF+N+  H+  F ++ 
Sbjct: 575  QQ-LSFFSLPEFEMWKKETD-NFHTYKIKYYKGLGTSTAKEAKEYFENMARHRIRFRYDG 632

Query: 662  DQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQ---------KEKY--------IKYSD 704
            +QD + I +AFSKK ++ RK WL+     NH+++          E+Y        + +SD
Sbjct: 633  EQDDQNIIMAFSKKCVDQRKDWLM-----NHMNETKRRKEIGLSERYLYEKDTRAVSFSD 687

Query: 705  FVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAY 764
            F+N EL+L+S  D  RSIP+M+DG KPGQRK++F   KRN  +E KVAQ +G V+EHSAY
Sbjct: 688  FINVELVLYSNYDNVRSIPNMIDGFKPGQRKVMFTCLKRNDRREVKVAQLAGSVAEHSAY 747

Query: 765  HHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFL 824
            HHGE SL +TI+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LSP+ R++
Sbjct: 748  HHGETSLMATIINLAQNFVGSNNINLLQPIGQFGTRLAGGKDAASPRYIFTMLSPLARYI 807

Query: 825  FPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVR 884
            F K DD LL +  +D Q+IEP +Y+P+IP VLVNG++GIGTGW + IPNYNPR+I+ N++
Sbjct: 808  FHKHDDALLKHEYDDNQKIEPVFYIPVIPMVLVNGADGIGTGWMTKIPNYNPREIIENLQ 867

Query: 885  RLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQ 944
            R+++G   +PM P+Y+ F G +E          Y ++G I  +    L I ELPI  WTQ
Sbjct: 868  RMMDGIDPKPMTPYYKNFKGVVESCGD----FRYVISGEISVIGPDKLEITELPIGTWTQ 923

Query: 945  DYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTT 1000
             Y+E  LE ++   D+  + I  +++Y+ DT V F V L+ + ++  +++GL K FK+ T
Sbjct: 924  TYKETVLEPMLHGSDKTPAVITDYKEYNTDTAVHFIVMLNRDKLLELEKDGLHKAFKIQT 983

Query: 1001 TISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVR 1060
            T++ ++M  FD    + KYD+  QIL+ F+ +R++ Y KRK      L+ E  KL N+ R
Sbjct: 984  TMTITSMCAFDENQCLNKYDSVIQILKRFYKVRMDTYHKRKDYLEGVLQAEAAKLSNQAR 1043

Query: 1061 FILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEESEEN 1116
            FIL   +G +V+ N+K+ D++ EL ++ +   P    K S++ E V+    +  +E+   
Sbjct: 1044 FILEKCDGTLVIENKKKKDMIAELVRRNYESDPVVAWKLSQNREQVLEEVAENDDENAAA 1103

Query: 1117 PEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDA 1176
               +  ++S ++DYLL M + TLT EK   LL  RD+   E+  L+  TP SLW +DLD 
Sbjct: 1104 ATAIT-MESENFDYLLGMTMWTLTKEKKDDLLRQRDEKVAELKRLQARTPISLWKEDLDN 1162

Query: 1177 LDMQLD 1182
            L  +L+
Sbjct: 1163 LLSELN 1168


>gi|402900108|ref|XP_003913022.1| PREDICTED: DNA topoisomerase 2-alpha isoform 2 [Papio anubis]
          Length = 1526

 Score = 1152 bits (2981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1199 (51%), Positives = 818/1199 (68%), Gaps = 74/1199 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PV 
Sbjct: 207  KPFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVS 265

Query: 266  SFAEY---VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVA 322
             F +    +D     +   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG HVDYVA
Sbjct: 266  IFLDVNDNLDETGNPLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRHVDYVA 325

Query: 323  NQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS 381
            +Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+  SFGS
Sbjct: 326  DQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQPKSFGS 385

Query: 382  KCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAGG 440
             C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DAN AGG
Sbjct: 386  TCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDANDAGG 444

Query: 441  RNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGN 500
            RNS  CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N+EI N
Sbjct: 445  RNSTDCTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKMLNVREASHKQIMENAEINN 504

Query: 501  IKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLA 557
            I KI+GL+    Y   +++K+LRYG +MIMTDQ                           
Sbjct: 505  IIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ--------------------------- 537

Query: 558  QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWK 617
             D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P++E WK
Sbjct: 538  -DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPEFEEWK 594

Query: 618  ESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
             S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAFSKK+I
Sbjct: 595  SSTP-NYKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQI 653

Query: 678  EARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQRSIPSM 725
            + RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +RSIPSM
Sbjct: 654  DDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERSIPSM 713

Query: 726  VDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGS 785
            VDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ+FVGS
Sbjct: 714  VDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGS 773

Query: 786  NNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEP 845
            NN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D Q++EP
Sbjct: 774  NNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDNQRVEP 833

Query: 846  TWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGT 905
             WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRL++GE   PM P Y+ F GT
Sbjct: 834  EWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLMDGEEPLPMLPSYKNFKGT 893

Query: 906  IEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQNDSFI 961
            IE+ A  +    Y ++G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++    I
Sbjct: 894  IEELAPNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEKTPPLI 949

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDT 1021
              +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +KKYDT
Sbjct: 950  TDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDT 1009

Query: 1022 PEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLL 1081
               IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ + +L+
Sbjct: 1010 VLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELI 1069

Query: 1082 LELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMA 1135
              L Q+G+   P         K  +      +D  +E+E++  V +   +  ++YLL M 
Sbjct: 1070 KVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTDSGPT--FNYLLDMP 1127

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            +  LT EK   L   R++  +E+D L++ +P  LW +DL      ++EL+  +A+ +++
Sbjct: 1128 LWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATF---IEELEAVEAKEKQD 1183


>gi|307180209|gb|EFN68242.1| DNA topoisomerase 2 [Camponotus floridanus]
          Length = 1502

 Score = 1152 bits (2981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/1218 (49%), Positives = 814/1218 (66%), Gaps = 84/1218 (6%)

Query: 13   NNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRT 72
            N A    P+   KTIE +YQKKSQLEHILLRPDTYIGS+E  T+ +W++++E   MI + 
Sbjct: 7    NGAGDGKPSTKQKTIEGIYQKKSQLEHILLRPDTYIGSVEPVTEMMWVFDKEKDMMIQKD 66

Query: 73   ISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEG 132
            I YVPGLYKIFDEILVNAADNKQRDPKMD +K+ ID E++ ISV N+G G+PV IH+EE 
Sbjct: 67   IKYVPGLYKIFDEILVNAADNKQRDPKMDMIKIDIDSENNTISVWNNGKGIPVVIHKEEN 126

Query: 133  VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVF 192
            +YVP +IFGHLLTSSNYDD  +K TGGRNGYGAKL NIFS  F +ETA  +  K  KQ +
Sbjct: 127  MYVPTMIFGHLLTSSNYDDEEEKVTGGRNGYGAKLCNIFSHRFTVETATKEYKKCLKQTW 186

Query: 193  TNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKS 252
             +NMGK SEP I K   GD++TKV+F PDL+KF M  L++D+V LM +R  D+A    K 
Sbjct: 187  GDNMGKASEPRI-KEYHGDDFTKVTFSPDLSKFKMQSLDNDIVGLMSRRAYDVAAS-SKG 244

Query: 253  VKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVS 304
            VKV LNG R+PVK+F +YVD Y K         +   +E    RWE+ +TLS+  FQQ+S
Sbjct: 245  VKVYLNGSRIPVKNFKDYVDFYIKGKEDDVGNPLKIVYENCGPRWEVALTLSDKGFQQMS 304

Query: 305  FVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPA 363
            FVN IAT KGG HVD+V   +   ++  + KKNK    +K   +KNHLW+FVN LI+NP 
Sbjct: 305  FVNSIATTKGGRHVDHVTELIVKQLIETLKKKNKAGVAIKPFQIKNHLWIFVNCLINNPT 364

Query: 364  FDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK-NDGTK 422
            FDSQTKE +TL+  SFGSKC L+++F+  +T K G+VE +LSWA FK    L+K    +K
Sbjct: 365  FDSQTKENMTLQAKSFGSKCVLTDKFIASIT-KIGVVEAVLSWAKFKADSQLEKLGPKSK 423

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
               + GI KLEDAN AG   S +CTLILTEGDSAK +A++G++ +GRD++G+FPLRGK+L
Sbjct: 424  QRKLHGIPKLEDANDAGTAKSLECTLILTEGDSAKTMAVSGIASIGRDKYGIFPLRGKML 483

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFL 539
            NVREA+  Q+L N+EI N+ KILGL+   +Y   +++K+LRYG +MIMTDQ         
Sbjct: 484  NVREATHKQILENAEINNLIKILGLQYKKKYETRDDLKTLRYGKMMIMTDQ--------- 534

Query: 540  LWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATN 599
                               D DGSHIKGLLINFIH  WPSLLK+ +F+ EFITPIVKAT 
Sbjct: 535  -------------------DQDGSHIKGLLINFIHHNWPSLLKL-NFIEEFITPIVKAT- 573

Query: 600  KNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
            K  + LSF+S+P++EAWK+    N  ++ IKYYKGLGTST+KE KEYF+N+  H+  F +
Sbjct: 574  KGSQTLSFFSLPEFEAWKKETE-NFHTYKIKYYKGLGTSTAKEAKEYFENMARHRIRFRY 632

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQK---------EKY--------IKY 702
            E D+D + I +AFSKK ++ RK WL+     NH+++          E+Y        + +
Sbjct: 633  EGDRDDQNIIMAFSKKCVDQRKDWLM-----NHMNETKRRKEIGLGERYLYEKDTRTVSF 687

Query: 703  SDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHS 762
            SDF+N EL+L+S  D  RSIP+M+DG KPGQRK++F   KRN  +E KVAQ +G V+EHS
Sbjct: 688  SDFINVELVLYSNYDNVRSIPNMIDGFKPGQRKVMFTCLKRNDKREVKVAQLAGSVAEHS 747

Query: 763  AYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITR 822
            AYHHGE SL +TI+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LSP+ R
Sbjct: 748  AYHHGETSLMATIINLAQNFVGSNNINLLQPIGQFGTRLTGGKDAASPRYIFTMLSPLAR 807

Query: 823  FLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVAN 882
            ++F K DD LL +  +D Q+IEP +Y+P+IP +LVNG++GIGTGW + IPNYNPR+I+ N
Sbjct: 808  YIFHKHDDALLKHEYDDNQKIEPVFYVPVIPMILVNGADGIGTGWMTKIPNYNPREIIEN 867

Query: 883  VRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRW 942
            + R+++G   +PM P+Y+ F G +E          Y ++G I  +    L I ELPI  W
Sbjct: 868  LHRMMDGADPKPMSPYYKNFKGVVESCGD----YRYVISGEISVIGPDKLEITELPIGTW 923

Query: 943  TQDYRE-FLESIIDQND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKL 998
            TQ Y+E  LE ++  ++   + I  +++Y+ DT V F + L+ + ++  ++EGL K FK+
Sbjct: 924  TQTYKETVLEPMLHGSEKIPAIITDYKEYNTDTAVHFIIILNRDKLLELEREGLHKAFKI 983

Query: 999  TTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENK 1058
             +T + ++M  FD    + KY+   QIL+ F+ +RLE Y KRK      L+ E  KL N+
Sbjct: 984  QSTTTITSMCAFDENQCLNKYENVIQILKVFYKVRLETYHKRKDYLEGILKAESAKLSNQ 1043

Query: 1059 VRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEESE 1114
             RFIL   +G +V+ N+K+ D++ EL ++ +   P    K S++ E V+    +  E  +
Sbjct: 1044 ARFILEKCDGTLVIENKKKKDMIAELVRRNYDSDPVMVWKLSQNREQVLE---EVGEHDD 1100

Query: 1115 ENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDL 1174
            EN      ++  ++DYLL M + TLT EK   LL  RD+   E+  L+  TP SLW +DL
Sbjct: 1101 ENAPTATAMEKENFDYLLGMTMWTLTKEKKDDLLRQRDEKMAELKRLQVRTPISLWKEDL 1160

Query: 1175 DALDMQLDELDKSDARAE 1192
            D L  +L++L++ + + +
Sbjct: 1161 DNLLTELNKLEEKEQKED 1178


>gi|91079588|ref|XP_967653.1| PREDICTED: similar to topoisomerase II [Tribolium castaneum]
          Length = 1552

 Score = 1152 bits (2981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1213 (50%), Positives = 809/1213 (66%), Gaps = 83/1213 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            +TIEE YQKKSQLEHILLRPDTYIGS+EK  + +W+Y+ +++ +I + ISYVPGLYKIFD
Sbjct: 31   QTIEETYQKKSQLEHILLRPDTYIGSVEKVDENMWVYDRDTEMIIQKNISYVPGLYKIFD 90

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRD  MD +K+ I+Q+ ++ISV N+G G+PV +H+ E +YVP +IFGHLL
Sbjct: 91   EILVNAADNKQRDNTMDCIKIEINQDDNVISVWNNGQGIPVAMHKSENMYVPTMIFGHLL 150

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNY+D  +K TGGRNGYGAKL NIFST+F +ETA  +  + +KQV+ NNM K SEP I
Sbjct: 151  TSSNYNDKEEKVTGGRNGYGAKLCNIFSTKFTVETATKEYKRHFKQVWGNNMTKASEPKI 210

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
             K   G+++TK++F PDL KF M  LEDD+V+LM +R  D+A    + VKV LNG RVPV
Sbjct: 211  -KDHFGEDFTKITFSPDLVKFKMEKLEDDIVSLMCRRAFDVAAST-RGVKVFLNGKRVPV 268

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            K+F +YVD + K             +E  NERWE+ +TLS+  FQQ+SFVN IAT KGG 
Sbjct: 269  KNFKDYVDFFTKGKDEDGNEKCKVVYEVCNERWEVAMTLSDRGFQQMSFVNSIATTKGGR 328

Query: 317  HVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV   +   ++ V+ K+NK    +K   VKNH+W+F+N LI NP FDSQTKE +TL+
Sbjct: 329  HVDYVTEMIVKQIIEVLKKRNKGGVAIKPFQVKNHMWIFINCLIVNPTFDSQTKENMTLQ 388

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGSKC LSE+F+ +V  KSGIVE++LSWA FK   +L KK  G K   ++GI KLED
Sbjct: 389  AKSFGSKCTLSEKFITQV-VKSGIVESVLSWAKFKAQTELEKKTAGKKQSKLKGIPKLED 447

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG +N  +CTLILTEGDSAK+LA++GL V+GRD +GVFPLRGKLLNVREA+  Q+L 
Sbjct: 448  ANEAGTKNGLRCTLILTEGDSAKSLAVSGLGVIGRDYYGVFPLRGKLLNVREATHKQILE 507

Query: 495  NSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N EI N+ KILGL+   +YN   ++++LRYG +MIMTD                      
Sbjct: 508  NQEINNLIKILGLQYKKKYNTDEDMRTLRYGKVMIMTD---------------------- 545

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                  QD DGSHIKGLLINFIH  WP LL+   FL EFITPIVKA  +N + LSFYS+P
Sbjct: 546  ------QDQDGSHIKGLLINFIHYNWPELLR-RDFLEEFITPIVKAKKRN-ETLSFYSLP 597

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            ++E WK S   N  ++ IKYYKGLGTS SKE KEYF ++  H+  F ++  +D + I LA
Sbjct: 598  EFEEWK-SNTPNHRTYQIKYYKGLGTSDSKEAKEYFSDMARHRIRFRYKGPEDDDHIVLA 656

Query: 672  FSKKKIEARKKWLLQF----EPGNHLDQKEKY--------IKYSDFVNKELILFSMADLQ 719
            FSKK IE RK+WL  F         L   EKY        + Y+DFVN EL+LFS AD  
Sbjct: 657  FSKKHIEHRKEWLTNFMVESRRRKELGLAEKYLYAKDTKSVSYTDFVNLELVLFSNADNI 716

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIP +VDGLKPGQRK++F  FKRN  +E KVAQ +G V+E SAYHHGE SL  TI+ +A
Sbjct: 717  RSIPCLVDGLKPGQRKVMFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEVSLCMTIVNLA 776

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLL+P GQFGTR  GGKD+AS RYIFT++SP+TR +F   DD LL +  ED
Sbjct: 777  QNFVGSNNINLLEPRGQFGTRMAGGKDSASPRYIFTKMSPLTRMIFNPSDDYLLKHEFED 836

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q+IEP WY+PIIP VLVNG++GIGTGW + IPNYNPR++V N+R +L+ E    M PWY
Sbjct: 837  NQKIEPVWYIPIIPMVLVNGADGIGTGWMTKIPNYNPRELVKNIRAMLDQEEPTNMVPWY 896

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQND 958
            + F G+I           Y  +G I  + +  + I ELPI  WTQ+Y+E  LE ++  ++
Sbjct: 897  KNFIGSIVDCGDNR----YVASGEIAIIGDNRVEITELPIGTWTQNYKENVLEPLLHGSE 952

Query: 959  ---SFIRGFRQYSDDTTVDFEV-FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
               + I+ +++Y+ DTTV F + FL  +      + GL K FKL + ISTS+M +FD  G
Sbjct: 953  KVKAVIQDYKEYNTDTTVKFIITFLPGQLETLENEAGLHKTFKLQSLISTSSMCVFDELG 1012

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             I++YD+   IL++++ +RL  Y+KRK      L+ E  KL N+ RFI+   +  +VV N
Sbjct: 1013 CIRRYDSVTDILKDYYKLRLTMYQKRKDYLEGMLKAEASKLSNQARFIMEKCDRTLVVEN 1072

Query: 1075 RKRTDLLLELRQKGFTPFP-KNSKSIEAVVAG------------ATDETEESEENPEVV- 1120
            +KR  ++ EL ++G+ P P K+ K   A   G            AT++T +   +PE   
Sbjct: 1073 KKRKVIIDELIKRGYEPDPVKDWKQRVATEDGDEEAPAEEEEAPATEQTTKKPVDPEKAF 1132

Query: 1121 -NGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
             N      +DYLL M++  LT EK   LL  RD   +E++ L+K T   LW +DLDA   
Sbjct: 1133 QNSTDVQKFDYLLGMSMWMLTEEKKNELLRQRDIKLQELETLKKKTHCDLWREDLDAFME 1192

Query: 1180 QLDELDKSDARAE 1192
            +LDE+++ +   E
Sbjct: 1193 KLDEVEEKERNDE 1205


>gi|255946696|ref|XP_002564115.1| DNA topoisomerase II top2-Penicillium chrysogenum [Penicillium
            chrysogenum Wisconsin 54-1255]
 gi|211591132|emb|CAP97358.1| DNA topoisomerase II top2-Penicillium chrysogenum [Penicillium
            chrysogenum Wisconsin 54-1255]
          Length = 1725

 Score = 1152 bits (2980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 601/1188 (50%), Positives = 802/1188 (67%), Gaps = 67/1188 (5%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E YQK +QLEHI+ RPDTYIGS E+ TQ +W+Y   ++ M  R +S+VPGLYKIFDEI+V
Sbjct: 132  EKYQKLTQLEHIIKRPDTYIGSTERTTQQMWVYNSGTELMEFRDVSFVPGLYKIFDEIVV 191

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNK  D  M+ +++ ID+E   ISV N+G G+P+EIH +E +YVPELIFGHLLTSSN
Sbjct: 192  NAADNKHNDSSMNEIRITIDREAGEISVWNNGRGIPIEIHSKEKIYVPELIFGHLLTSSN 251

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD+ +K TGGRNG+GAKL N+FSTEF +ET D ++ KKYKQ +T NM K  +  I+  K
Sbjct: 252  YDDSQQKVTGGRNGFGAKLCNVFSTEFTLETQDSRQKKKYKQTWTENMTKMGKAKITDAK 311

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
             GD++TKV+FKPD AKF M  ++DD  +L+K+RV DLAG  G  V V+LN  RVP++SF 
Sbjct: 312  -GDDYTKVTFKPDFAKFGMEGIDDDFESLVKRRVYDLAGTAG--VAVKLNNTRVPIRSFR 368

Query: 269  EYVDMYPKSVTRFHERVNE---------------RWEICVTLSEGQFQQVSFVNGIATIK 313
            +Y++MY K++ +  ER ++               RWEI   +S+G FQQVSFVN IAT  
Sbjct: 369  KYMEMYTKAIRK--ERGDDGPPTKDEIITCSPDPRWEIGFAVSDGSFQQVSFVNSIATTS 426

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETL 372
            GGTHV+Y+A+Q+   +   V KKNK+ A +K+  ++NH+++FV ALI NPAF SQTKE L
Sbjct: 427  GGTHVNYIADQICTRLADQVKKKNKSGATLKSAQIRNHIFIFVKALIVNPAFTSQTKEQL 486

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKL 432
            T + S FGSKC L E+F KKV  K+ ++  +L +A  K  + LKK D  +   +    KL
Sbjct: 487  TTKASQFGSKCPLDEDFYKKVL-KTEVMSNILHFAEQKADQILKKGDTGRRTRMNN-PKL 544

Query: 433  EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
             DAN AG R    CTLILTEG+SAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+
Sbjct: 545  VDANKAGTREGHHCTLILTEGESAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASFDQI 604

Query: 493  LNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              N EI +IK  +GL+   EY + K LRYGHLMIMTDQ                      
Sbjct: 605  SKNVEIQSIKNFIGLQHKKEYTDTKGLRYGHLMIMTDQ---------------------- 642

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFY 608
                  DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPI+K    +     K  SF+
Sbjct: 643  ------DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIIKVWKGDPKNPTKQKSFF 696

Query: 609  SMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA- 667
            +MP+++ W+E+   +   W  KYYKGLGTST+++ + YF+++  H K+F     QDGEA 
Sbjct: 697  TMPEHDEWREA-HQHERGWEHKYYKGLGTSTTEDAQVYFRDLDRHLKEF--HTMQDGEAG 753

Query: 668  -IELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
             IELAFSKKK + RK+WL QF+PG  LD     I Y+DF+NKELILFSMAD QRSIPS+V
Sbjct: 754  LIELAFSKKKADERKEWLRQFKPGTFLDHSVAKITYTDFINKELILFSMADNQRSIPSVV 813

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DGLKPGQRK+L   F+RN  K+ KV + +G+VS  +AYHHG+ SL  TI+G+AQ FVGSN
Sbjct: 814  DGLKPGQRKVLHTCFRRNLKKDMKVVELAGHVSGMTAYHHGDVSLQQTIVGLAQTFVGSN 873

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            NIN L+P+G FG+R QGG D ASARYI+TRLSP  R +F   D+ LL Y  +DG++IEP 
Sbjct: 874  NINCLEPSGNFGSRLQGGGDCASARYIYTRLSPFARKVFHSADEPLLTYNEDDGKKIEPE 933

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI 906
             +MP++P +L+NG++GIGTGWSS IPNYNP D+V N++RL+ GE  EPM PW+RGF G +
Sbjct: 934  VFMPVVPMILINGADGIGTGWSSSIPNYNPEDVVNNLKRLMAGEPTEPMQPWFRGFTGEV 993

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGF 964
                    G  +  +GII E  E  + I ELPIR WTQD+++ LE II  ++  SFI+ +
Sbjct: 994  VAV----GGDRFKFSGIIRECGEKEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDY 1049

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
            R Y+  T V F + L E+ M     EGL +KFKLT TI+T+N+  FD +G I KY T + 
Sbjct: 1050 RDYNTHTKVHFIIQLDEKHMKVALTEGLEEKFKLTKTIATTNLVAFDPEGRITKYATVDD 1109

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            IL+EFF +RL++YE+RK+ QL +L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL
Sbjct: 1110 ILKEFFVVRLKYYERRKQFQLADLQRDLEKLSNQARFVQMIIDGKLVISKKKKPVLIAEL 1169

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            + KGF P  K +++ +        E E  EE+ +      S  +DYLLSM + +LT E+V
Sbjct: 1170 KDKGFKPISKVAEAPKMGEDEPVVEEEGEEESDDNDTQKLSSSFDYLLSMPMWSLTQERV 1229

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD-ELDKSDARA 1191
            + L         EVD L K + E +W +DLD    +   +L+  D RA
Sbjct: 1230 EKLRRQIGDKETEVDVLIKLSKEDIWTRDLDEFIQEWRFQLEDEDRRA 1277


>gi|378755091|gb|EHY65118.1| DNA topoisomerase 2 [Nematocida sp. 1 ERTm2]
          Length = 1186

 Score = 1152 bits (2980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/1179 (50%), Positives = 789/1179 (66%), Gaps = 79/1179 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+EE+YQKK+ +EH+LLRPDTYIGS++  T+ ++++  E+  M+ + ++Y PGLYKIFD
Sbjct: 6    KTVEEIYQKKTPIEHVLLRPDTYIGSVQPETRNMYVWCSETMKMVRKEVTYTPGLYKIFD 65

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RD +M  +++ +D++   ISV N G G+PV IH +E VYVPELIFGHLL
Sbjct: 66   EILVNAADNKTRDKRMSEIRIEVDRKTSTISVCNDGQGIPVVIHAKENVYVPELIFGHLL 125

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD  KK TGGRNGYGAKL NIFST FIIETAD K  + ++QV+TNNM  K EP I
Sbjct: 126  TSSNYDDAEKKMTGGRNGYGAKLCNIFSTRFIIETADKKNKRMFRQVYTNNMLSKEEPEI 185

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +    G  +TKV+F+PDLAKF M  ++DD ++++ KRV DLAG +   + V  NG ++ V
Sbjct: 186  TPF-SGAEYTKVTFQPDLAKFGMKRIDDDFMSMIMKRVYDLAGTVA-GITVYYNGEKIGV 243

Query: 265  KSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQ 324
             +F EY+ ++  S         +RWE+   L + QFQ VSFVN I+T +GGTHV+Y+A+Q
Sbjct: 244  SNFKEYIRLFFDSDVEIAYEAKDRWEVAYVLGDEQFQHVSFVNRISTPRGGTHVNYIADQ 303

Query: 325  VANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE 384
            +   V+    K  K   V+   VK ++++F+N LI+NPAFDSQTKETLTL+QSSFGSK  
Sbjct: 304  IVAAVVEQTKKVEKGLVVRPVQVKANIFLFLNCLIENPAFDSQTKETLTLKQSSFGSKHV 363

Query: 385  LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSE 444
            L   F+  +  +SGIVE     A  KQ++ LKK DG KT  +RGI KL+DAN AG R + 
Sbjct: 364  LGSRFIADI-MRSGIVEKSAYAARAKQTQQLKKTDGHKTSKLRGIPKLDDANNAGTRFAS 422

Query: 445  QCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKI 504
            QCTLILTEGDSAK+LA++GLSV+GRD +GVFPLRGKLLNVREA+  Q++ N EI NIKKI
Sbjct: 423  QCTLILTEGDSAKSLAVSGLSVIGRDNYGVFPLRGKLLNVREATHKQLMENIEINNIKKI 482

Query: 505  LGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSH 564
            +GL+ G EY   +SLRYGH+MIMTDQ                            DHDGSH
Sbjct: 483  MGLQHGKEYATTESLRYGHIMIMTDQ----------------------------DHDGSH 514

Query: 565  IKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNA 624
            IKGL+IN I  F+PSLL+I  FL EFITPIV+AT K      F+++P++E+W E+  G  
Sbjct: 515  IKGLIINMIDHFFPSLLRIKGFLQEFITPIVRAT-KGSMSRDFFTIPEFESWTETAEGRE 573

Query: 625  SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
            + W +KYYKGLGTST+K+ K+YF N+  H K+F   D  D + IELAFSKK++E+RK WL
Sbjct: 574  NGWRVKYYKGLGTSTAKDAKDYFSNLDFHIKEFNTVDSVDRDKIELAFSKKRVESRKVWL 633

Query: 685  LQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRN 744
             +F PG +LD + + I   +F+++ELI FS+AD  RSIP+M+DG+KPGQRKI+FC FKR 
Sbjct: 634  KEFVPGTYLDNRVQAISIKNFIDRELIHFSLADNIRSIPNMIDGMKPGQRKIIFCCFKRQ 693

Query: 745  FIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGG 804
               E KVAQ +GYVSEHSAYHHGEQSL STI+ +AQD+VGSNNI LLQP GQFGTR QGG
Sbjct: 694  LRTEIKVAQLAGYVSEHSAYHHGEQSLCSTIVNLAQDYVGSNNIPLLQPIGQFGTRLQGG 753

Query: 805  KDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIG 864
            KDAAS RYIFT L PITR+LF ++DD LL+YL +D   +EP  Y+PIIP VLVNGS+GIG
Sbjct: 754  KDAASPRYIFTALQPITRYLFREEDDNLLNYLKDDNLMVEPDMYVPIIPMVLVNGSDGIG 813

Query: 865  TGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGII 924
            TGWS+ IP YNP +IV NV+R++ G+  + M PWY+GF G  +   S +    Y   G  
Sbjct: 814  TGWSTCIPPYNPIEIVDNVKRMIMGKEPKEMIPWYKGFVGECDDLGSGK----YRTIGAF 869

Query: 925  EEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESM 984
            E+  +  + I ELP+  WTQ+Y++FLE++I+  D  I+ FR+Y+ DT V+FEV +S +  
Sbjct: 870  EQ-EKDKISILELPVGVWTQNYKDFLETLIESGD--IKDFREYNTDTRVNFEVVVSTKHK 926

Query: 985  MRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQ 1044
            +      + K FKL+  IS +NM  F+SKGV++KY    +IL+EFF +R + Y +RK   
Sbjct: 927  I-----NVPKVFKLSNQISIANMVAFNSKGVLQKYANTTEILKEFFIVRRDLYVRRKDFL 981

Query: 1045 LENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVA 1104
            L+ L  E   LENKVRFI  VV   + +  RK +D++ +L  K +               
Sbjct: 982  LKKLLTETTILENKVRFIKEVVADTLKILKRKSSDVINDLTAKDY--------------- 1026

Query: 1105 GATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKA 1164
                     ++N           YDYLL+M I +LT E+++ L  +      E   L+  
Sbjct: 1027 -------HKKDN----------SYDYLLTMQIASLTTERMEKLENEAAGKRSEYIRLKAV 1069

Query: 1165 TPESLWVKDLDALDMQLDELDKSDA---RAEEERMKIKG 1200
            + E +W+ DLD    +LD   K D    R +  +MK KG
Sbjct: 1070 SIEDMWLADLDEFLGKLDLTVKDDGPGPRKKGRKMKNKG 1108


>gi|332027283|gb|EGI67367.1| DNA topoisomerase 2 [Acromyrmex echinatior]
          Length = 1552

 Score = 1151 bits (2978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/1232 (48%), Positives = 823/1232 (66%), Gaps = 87/1232 (7%)

Query: 6    RLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES 65
            ++    +N A         KTIE +YQKKSQLEHILLRPDTYIGS+E  T+ +W++++E 
Sbjct: 47   KMSTAVANGAGNSKSVTKQKTIEGIYQKKSQLEHILLRPDTYIGSVETITEMMWVFDKEK 106

Query: 66   KTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPV 125
            + M+ + I YVPGLYKIFDEILVNAADNKQRDPKMD +K+ ID E++ ISV N+G G+PV
Sbjct: 107  EMMVQKDIKYVPGLYKIFDEILVNAADNKQRDPKMDMIKIDIDSENNTISVWNNGKGIPV 166

Query: 126  EIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRL 185
             IH+EE +YVP +IFGHLLTSSNYDD  +K TGGRNGYGAKL NIFS  F +ETA  +  
Sbjct: 167  VIHKEENMYVPTMIFGHLLTSSNYDDEEEKVTGGRNGYGAKLCNIFSHRFTVETATKEYK 226

Query: 186  KKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDL 245
            K  KQ + +NMGK SEP I K   G+++TKV+F PDL+KF M  L+DD+V+LM +R  D+
Sbjct: 227  KCLKQTWGDNMGKASEPRI-KEYFGEDFTKVTFSPDLSKFKMQSLDDDIVSLMSRRAYDV 285

Query: 246  AGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSE 297
            A    K VKV LNG RVPVK+F +YVD Y K         +   +E  + RWE+ +TLS+
Sbjct: 286  AAST-KGVKVFLNGSRVPVKNFKDYVDFYIKGKEDDIGNPLKIVYENCSPRWEVALTLSD 344

Query: 298  GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVN 356
              +QQ+SFVN IAT KGG HVD+V   +   ++  + KKNK    +K   +KNH+W+FVN
Sbjct: 345  KGYQQMSFVNSIATTKGGRHVDHVTELIVKQLIETLKKKNKAGVAIKPFQIKNHMWIFVN 404

Query: 357  ALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK 416
             LI+NP FDSQTKE +TL+  SFGSKC LS++F+  +T K G+VE +L+WA FK    L+
Sbjct: 405  CLINNPTFDSQTKENMTLQPKSFGSKCALSDKFITSIT-KIGVVEAVLTWAKFKADSQLE 463

Query: 417  K-NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVF 475
            K    +K   + GI KLEDAN AG   S +CTLILTEGDSAK +A++G++ +GRD++G+F
Sbjct: 464  KLGPKSKQRKLHGIPKLEDANDAGTAKSLECTLILTEGDSAKTMAVSGIASIGRDKYGIF 523

Query: 476  PLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVL 532
            PLRGK+LNVREA+  Q+L N+EI N+ KILGL+   +Y    ++K+LRYG +MIMTDQ  
Sbjct: 524  PLRGKMLNVREATHKQILENAEINNLIKILGLQYKKKYETREDMKTLRYGKMMIMTDQ-- 581

Query: 533  LAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 592
                                      D DGSHIKGLLINFIH  WPSLLK+ +F+ EFIT
Sbjct: 582  --------------------------DQDGSHIKGLLINFIHHNWPSLLKL-NFIEEFIT 614

Query: 593  PIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITL 652
            PIVKAT K  +V SF+S+P++E WK+    N  ++ IKYYKGLGTST+KE KEYF+N++ 
Sbjct: 615  PIVKAT-KGSQVKSFFSLPEFEQWKKETE-NFHTYKIKYYKGLGTSTAKEAKEYFENMSR 672

Query: 653  HKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQK---------EKY---- 699
            H+  F ++ +QD + I +AFSKK ++ RK WL+     NH+++          E+Y    
Sbjct: 673  HRIRFRYDGEQDDQNIIMAFSKKCVDQRKDWLM-----NHMNETKRRKEIGLGERYLYEK 727

Query: 700  ----IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFS 755
                + +SDFVN EL+L+S  D  RSIP+M+DG KPGQRK+LF   KRN  +E KVAQ +
Sbjct: 728  ETRDVSFSDFVNVELVLYSNYDNVRSIPNMMDGFKPGQRKVLFTCLKRNDKREVKVAQLA 787

Query: 756  GYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFT 815
            G V+EHSAYHHGE SL +TI+ +AQ+FVGSNNINLLQP GQFGTR  GGKD+AS RYIFT
Sbjct: 788  GSVAEHSAYHHGETSLMATIVNLAQNFVGSNNINLLQPIGQFGTRLAGGKDSASPRYIFT 847

Query: 816  RLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYN 875
             LSP+ R++F K DD LL Y  +D Q+IEP +Y+P+IP VLVNG++GIGTGW + IPNYN
Sbjct: 848  MLSPLARYIFHKHDDPLLKYEYDDNQRIEPVYYVPVIPMVLVNGADGIGTGWMTKIPNYN 907

Query: 876  PRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIK 935
            PR+I+ N++R++ G   +PM P+Y+ F G +E          Y ++G I  +    + I 
Sbjct: 908  PREIIENLQRMMEGADPKPMIPYYKNFKGVVESCGD----FRYVISGEISVIGPDKVEIT 963

Query: 936  ELPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEG 991
            ELPI  WTQ Y+E  LE ++   ++  + I  +++Y+ DT V F V ++ + ++  +++G
Sbjct: 964  ELPIGTWTQAYKETVLEPMLHGTEKTPAIITDYKEYNTDTAVHFIVMMNRDKLVELERDG 1023

Query: 992  LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
            L K FKL TT++ ++M  FD    + KY++  QIL+ F+ +R++ Y KRK      L+ E
Sbjct: 1024 LHKTFKLQTTMTITSMCAFDENQCLNKYESVVQILKGFYKVRMDTYHKRKDYLEGILQAE 1083

Query: 1052 LLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGAT 1107
              KL N+ RFIL   +  +V+ N+K+ D++ EL ++ +   P    K S++ E V+  A 
Sbjct: 1084 AAKLSNQARFILEKCDSTLVIENKKKKDMIAELVRRNYESDPVVSWKLSQNREQVLEEA- 1142

Query: 1108 DETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPE 1167
               E  EE+    + ++  ++DYLL M + +LT EK + LL  RD+   E+  L+  TP 
Sbjct: 1143 --VENDEESTPTTSTMEKENFDYLLGMTMWSLTREKKEDLLRQRDEKIAELKRLQARTPI 1200

Query: 1168 SLWVKDLDALDMQLDELDKSDARAEEERMKIK 1199
             LW +DLD L   L EL+K + + ++E+MK K
Sbjct: 1201 DLWKEDLDNL---LTELNKVEDKEQKEQMKTK 1229


>gi|18369808|dbj|BAB84099.1| DNA topoisomerase II [Aspergillus candidus]
          Length = 1096

 Score = 1151 bits (2977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/1134 (52%), Positives = 793/1134 (69%), Gaps = 63/1134 (5%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK +QLEHI+ RPDTYIGSIEK TQ +W+Y+  +++M  R +++VPGLYKIFDEI+VNA
Sbjct: 4    YQKLTQLEHIIKRPDTYIGSIEKATQQMWVYDSATESMEFREVTFVPGLYKIFDEIVVNA 63

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ D KMD +++ ID+E  +ISV N+G G+P+EIH +E +YVPELIFGHLLTSSNYD
Sbjct: 64   ADNKQNDEKMDEIRITIDRESGVISVWNNGRGIPIEIHSKEKIYVPELIFGHLLTSSNYD 123

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D   K TGGRNG+GAKL N+FSTEF IET D ++ KKY Q +T+NM K  +  I+  K G
Sbjct: 124  DGQMKVTGGRNGFGAKLCNVFSTEFSIETVDSRQGKKYVQTWTDNMSKVGKAKITSAK-G 182

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            +++TKV+FKPD  KF M  ++DD  AL+K+RV DLAG     V V+LNG R+PV++F +Y
Sbjct: 183  EDYTKVTFKPDYKKFGMEGMDDDFEALVKRRVYDLAGT--AKVAVKLNGSRIPVRNFKKY 240

Query: 271  VDMYPKSVT--RFHERVNE-----------RWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++MY K++   R  E  N+           RWE+   +S+G FQQVSFVN IAT  GG+H
Sbjct: 241  MEMYTKAIKKERGEEAANDKSEIVTASPDPRWEVGFAVSDGSFQQVSFVNSIATTSGGSH 300

Query: 318  VDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+Y+A+Q+ N +   V KKNK  A +KA  ++NH+++FVNALI NPAF SQTKE LT + 
Sbjct: 301  VNYIADQICNRLAEAVKKKNKQGATLKASQIRNHIFIFVNALIVNPAFTSQTKEQLTTKP 360

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSKC L ++F KKV  K+ ++  +L +A  K  + LKK DG K   +    KL DAN
Sbjct: 361  SQFGSKCILDDDFYKKVL-KTEVMTNILHFAEKKADQLLKKTDGGKRSRMNN-PKLTDAN 418

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+
Sbjct: 419  KAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASIDQISKNA 478

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI NIK  +GL+   EY + + LRYGHLMIMTDQ                          
Sbjct: 479  EIQNIKSFIGLQHKKEYTDTRGLRYGHLMIMTDQ-------------------------- 512

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFYSMPD 612
              DHDGSHIKGLLINF+   +PSLLKIP FL+EFITPIVK    +     K  SF++MP+
Sbjct: 513  --DHDGSHIKGLLINFLQVQFPSLLKIPEFLIEFITPIVKVWKGDPKNPTKSKSFFTMPE 570

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            YE WKE    N  +W  KYYKGLGTST+++ + YF+++  H K+F    D + + I+LAF
Sbjct: 571  YEQWKEE-HKNDRAWQHKYYKGLGTSTTEDAQIYFRDLDRHLKEFHTMQDHEAQLIDLAF 629

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            SKKK + RK+WL Q++PG  LD   K I Y+DF+NKELILFSMAD QRSIPS+VDGLKPG
Sbjct: 630  SKKKADERKEWLRQYKPGTFLDHSTKQITYTDFINKELILFSMADNQRSIPSVVDGLKPG 689

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+L+  FKRN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ FVGSNN+N L+
Sbjct: 690  QRKVLYTCFKRNVKKDMKVVELAGHVSGMTAYQHGDTSLQQTIVGLAQTFVGSNNLNCLE 749

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P+G FG+R QGG D ASARYI+TRLSP  R +F + D+ LL Y  +DG++IEP  Y+P++
Sbjct: 750  PSGNFGSRLQGGADCASARYIYTRLSPFARRVFNQQDEPLLTYNEDDGEKIEPELYVPVV 809

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P +L+NG++GIGTGWSS IPNYNP DIVAN++R+++GE  EPM PW+RGF G +    + 
Sbjct: 810  PLILINGADGIGTGWSSSIPNYNPEDIVANLKRMMDGEEPEPMQPWFRGFHGDV----TP 865

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDD 970
            +    Y  +G I+E+NE  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  
Sbjct: 866  QGPDRYKFSGRIQELNEKEVEITELPIRTWTQDFKDKLEDIIKAEKTPSFIKDYKDYNTH 925

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            T V F + + E+ +    +EGL +KFKL+ TI+T+N+  FD +G I KY T   IL+EFF
Sbjct: 926  TKVHFVIQMDEKHLKSAVEEGLEEKFKLSKTIATTNLVAFDPEGRITKYATVSDILKEFF 985

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +RL++YE+RK+ QL  L+ +L KL N+ RF+  +++G++VV+ +K++ L+ EL++KGF 
Sbjct: 986  AVRLKYYERRKQHQLSELQKDLDKLTNQARFVQMIIDGKLVVSKKKKSILITELKEKGFK 1045

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVV--NGVQSIDYDYLLSMAIGTLTLE 1142
             FPK +   EAV AG T++  E E + E      V S  YDYLL MAI +LT E
Sbjct: 1046 AFPKVA---EAVKAGETEQVVEEEGSEEEEAKTEVASNAYDYLLGMAIWSLTHE 1096


>gi|451854684|gb|EMD67976.1| hypothetical protein COCSADRAFT_80849 [Cochliobolus sativus ND90Pr]
          Length = 1633

 Score = 1151 bits (2977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 594/1190 (49%), Positives = 793/1190 (66%), Gaps = 73/1190 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQ  + LEHI+ RPDTYIGS+E+ T  +W+Y  ES++M +R +SYVPGLYKIFDEILVNA
Sbjct: 63   YQMLTHLEHIMKRPDTYIGSVERQTDKMWVYNSESESMEYRDVSYVPGLYKIFDEILVNA 122

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ D  M  ++V +D+E   IS+ N G G+P+EIH+E G+YVPE+IFGHLLTSSNYD
Sbjct: 123  ADNKQNDKNMSEIRVTVDRESGEISIRNDGKGIPIEIHKEHGIYVPEMIFGHLLTSSNYD 182

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ +K TGGRNGYGAKL N+FSTEF +ET D K+ KKYKQ +T NM K  +  I+  K  
Sbjct: 183  DDQQKVTGGRNGYGAKLCNVFSTEFTVETVDSKQKKKYKQTWTENMSKMGKAKITDIK-A 241

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++TKVS+K D A+F M  ++DD  A++K+R  D+AG L + VKV LNG R+ + SFA+Y
Sbjct: 242  DDYTKVSWKADYARFGMEGIDDDFEAMVKRRTYDMAGTL-RGVKVYLNGERIKITSFAKY 300

Query: 271  VDMYPKSVTRFHERVN-------------ERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++MY KS++R                   ERW+I   +S+G F QVSFVN IAT  GGTH
Sbjct: 301  MEMYTKSISRDQGNSEDNKEKDVIITDKLERWDIGFAVSDGAFNQVSFVNSIATTSGGTH 360

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+++A+Q+   +MA+VNKKNK A  +K   +KNHL++FVN  I NPAF SQTKE LT + 
Sbjct: 361  VNHIADQIVEKLMAIVNKKNKAAVKLKPAQIKNHLFLFVNCSIVNPAFTSQTKEQLTTKP 420

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSK  LS++FL  + AK+ +++ ++ +A  K  + +KK DG K   +   +KL DAN
Sbjct: 421  SQFGSKPVLSDKFLNAI-AKTDVIQNIMHFAQQKADQMMKKTDGNKRNRINN-AKLTDAN 478

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG ++   CTLILTEG+SA  LA+AG +VV +D FGVFPLRGKLLNVR+A+ +Q++ N+
Sbjct: 479  KAGTKDGHLCTLILTEGESASVLALAGRAVVNQDLFGVFPLRGKLLNVRDATVDQIMKNA 538

Query: 497  EIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
            EI NIKK +GL+   EY   ++KSLRYGHLMIMTDQ                        
Sbjct: 539  EIQNIKKFMGLQHKKEYTVADMKSLRYGHLMIMTDQ------------------------ 574

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---ATNKNGKVL-SFYSM 610
                DHDGSHIKGLLINF+   +PSLLKIP FL+EFITPIVK      KN + + SF+SM
Sbjct: 575  ----DHDGSHIKGLLINFLQCQFPSLLKIPGFLLEFITPIVKVWKGDQKNPRNMKSFFSM 630

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+YE WKE    +   W  KYYKGLGTS   + + YF+++  H K F    +++ + IEL
Sbjct: 631  PEYEEWKEQ-HAHEKGWDHKYYKGLGTSDIPDAQIYFKDLDTHMKRFQVMREEEEKLIEL 689

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AFSKKK +ARK WL  F PG HLD     I Y DFVNKELILFSMAD  RSIPS++DGLK
Sbjct: 690  AFSKKKADARKDWLRDFVPGRHLDLTTPDISYDDFVNKELILFSMADNVRSIPSVIDGLK 749

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+++  F+RN  K+ KV + +G VS  + Y HGE S+  TI+G+AQ+FVG+NNIN 
Sbjct: 750  PGQRKVMYTCFRRNIKKDVKVVELAGAVSGSTDYAHGEASMQGTIVGLAQNFVGTNNINF 809

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+P+G FG+R +GG DAASARYI+TRL+P  R +F   DD LL Y   DG +IEP  Y+P
Sbjct: 810  LEPSGNFGSRLKGGADAASARYIYTRLTPFARRIFHPHDDALLKYGESDGNKIEPEMYVP 869

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL----NGEMMEPMHPWYRGFGGTI 906
            I+PT+L+NGS GIGTGWSS IPN+NP DI+ N+RR +      E M PM PWY+GF GT 
Sbjct: 870  ILPTILINGSSGIGTGWSSEIPNFNPMDIIENIRRRMQPGATKEDMTPMVPWYKGFTGTT 929

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGF 964
                       Y  TG + +  +  + I ELP+R WTQD++E LE II  ++  SFI+ +
Sbjct: 930  TVLGPDR----YQFTGTVRQTGDNEIEITELPVRYWTQDFKEKLEEIIKAEKGPSFIKDY 985

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
              Y+    V F + + ++ M     +GL + FKL    +TSN+  FD++G I KY T   
Sbjct: 986  IDYNTPDRVHFVIKMEDKYMAAALAKGLEEMFKLFKPQATSNLVAFDAQGRIHKYSTVLD 1045

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            I+EEF+HIRL +YEKRK+ QL+ +E ELLKL N+ RFI  +++G++ V+ +K+  L+ EL
Sbjct: 1046 IIEEFYHIRLRYYEKRKQHQLQVMEKELLKLTNQARFIQMIIDGKLTVSKKKKAALVQEL 1105

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            ++ GF P PK    +E       +E  + +E+ E    V + DYDYLL MAI +LT E+V
Sbjct: 1106 KKLGFAPIPK----VEEAKNIGEEEDAQEDESDEAEVEVSANDYDYLLGMAIWSLTQERV 1161

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            + L+    +  EEVD L K +P+ +W  DLDA       +D+ + + EEE
Sbjct: 1162 EKLMKQIGERQEEVDTLIKLSPKDIWNVDLDAF------MDEWNLQQEEE 1205


>gi|258569355|ref|XP_002543481.1| DNA topoisomerase 2 [Uncinocarpus reesii 1704]
 gi|237903751|gb|EEP78152.1| DNA topoisomerase 2 [Uncinocarpus reesii 1704]
          Length = 1704

 Score = 1150 bits (2976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 627/1297 (48%), Positives = 843/1297 (64%), Gaps = 92/1297 (7%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            + YQK +Q EHI+ RPDTYIGS+E+  Q +W++   ++ M  R +SYVPGLYKIFDEILV
Sbjct: 130  DQYQKLTQKEHIIRRPDTYIGSVERTQQQMWVFNSTTEQMEFREVSYVPGLYKIFDEILV 189

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNKQRD  M  ++V +D+E   ISV N+G G+PVEIH +E +Y+PELIFGHLLTSSN
Sbjct: 190  NAADNKQRDSSMSEIRVTLDKEAGEISVWNNGRGIPVEIHSKEKIYIPELIFGHLLTSSN 249

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD+  K TGGRNGYGAKL NIFSTEF +ETAD    KKYKQ + +NM    +  I+  K
Sbjct: 250  YDDDQAKVTGGRNGYGAKLCNIFSTEFTVETADSNSKKKYKQTWKDNMSVMGKAKIADVK 309

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
             GD++TK++FKPD  KF M  ++DD  AL+K+RV DLAG     V V+LNG ++ ++ F 
Sbjct: 310  -GDDYTKITFKPDFMKFGMEGMDDDFEALVKRRVYDLAGTC--KVNVKLNGTKIALRGFK 366

Query: 269  EYVDMYPKSVTRFHERVNE---------------RWEICVTLSEGQFQQVSFVNGIATIK 313
            +Y++MY K++   +ER  E               RWEI   +S+G FQQVSFVN IAT  
Sbjct: 367  KYMEMYTKAIK--NERGEEATSDKSEIVTDSPDPRWEIGFAVSDGSFQQVSFVNSIATTS 424

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKNANV-KAHNVKNHLWVFVNALIDNPAFDSQTKETL 372
            GGTHV+Y+++Q+   +   V KKNK   + K   ++NH+++FVN LI NPAF SQTKE L
Sbjct: 425  GGTHVNYISDQICAKLAESVKKKNKTGPLLKPAQIRNHIFLFVNCLIVNPAFTSQTKEQL 484

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKL 432
            T + S FGSKC LSE+FLKK+  K+ +++ ++ +A  K  + LKK DG++   +    KL
Sbjct: 485  TTKPSQFGSKCTLSEDFLKKIL-KTQVMQNIMHFAEQKADQILKKTDGSRRARMNN-PKL 542

Query: 433  EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
             DAN AG +    CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+
Sbjct: 543  TDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQI 602

Query: 493  LNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              N EI NIK  LGL+   EY + + LRYGHLMIMTDQ                      
Sbjct: 603  SKNQEIQNIKNFLGLQHKKEYADTRGLRYGHLMIMTDQ---------------------- 640

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFY 608
                  DHDGSHIKGLLIN++   +PSLLKIP FL+EFITPIVK    + K      SF+
Sbjct: 641  ------DHDGSHIKGLLINYLQVAFPSLLKIPGFLIEFITPIVKVWKGDPKQPTATKSFF 694

Query: 609  SMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAI 668
            ++P+YEAWKE + G+   W  KYYKGLGTS++++ + YF+++  H K+F    D + + I
Sbjct: 695  TIPEYEAWKE-VHGHDRRWDKKYYKGLGTSSTEDAEIYFRDLDRHLKEFHALQDNEAQLI 753

Query: 669  ELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
            +LAFSKKK + RK+WL QF+PG +LD   + I Y+DF+NKELILFSMAD  RSIPS+VDG
Sbjct: 754  DLAFSKKKADERKEWLRQFKPGTYLDHSVEKISYTDFINKELILFSMADNIRSIPSVVDG 813

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKPGQRK+L+  FKRN  K+AKV +  GYVS  + Y HGE SL  TI+G+AQ FVGSNN+
Sbjct: 814  LKPGQRKVLYAMFKRNVRKDAKVVELGGYVSGMTGYQHGEVSLQQTIVGLAQTFVGSNNV 873

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            N L+P+G FG+R QGG D ASARYI TRLSP  R +F   DD LL +  +DG+ IEP  +
Sbjct: 874  NCLEPSGNFGSRLQGGSDCASARYIHTRLSPFARRIFSTADDPLLKHNVDDGKIIEPEVF 933

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            +P++P VL+NG++GIGTGWS+ IPN+NP DIV N++RL++GE + PM PW+RGF G +  
Sbjct: 934  VPVVPLVLINGADGIGTGWSTSIPNFNPEDIVDNLKRLMDGEPVVPMKPWFRGFTGEV-- 991

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQ 966
            TA   AG  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ 
Sbjct: 992  TA---AGDRYKFSGIIKQTGDYEVEITELPIRTWTQDFKDKLEEIIKAEKAPSFIKDYKD 1048

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
            Y+  + V F + + E+ M +  ++GL ++FKL+ TI+TSNM  FD++G I KY+T E IL
Sbjct: 1049 YNTHSKVHFIIQMDEKHMKKAVEDGLEERFKLSRTITTSNMVAFDAEGRITKYNTAEDIL 1108

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
            E FF +R+ FYEKRK+  L  L  EL KL N+ RF+  +++G++V+  + +  L+ EL++
Sbjct: 1109 EAFFAVRIRFYEKRKQFMLAQLHKELEKLTNQARFVQMIIDGKLVIAKKPKAKLMQELKE 1168

Query: 1087 KGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQG 1146
            K F PFPK    ++A   G  + T E++E+ E      S  YDYLL MA+ +LT E+V  
Sbjct: 1169 KAFKPFPKG---VDAAKEGEDEPTVENDESEEEEKKSGSDGYDYLLGMALWSLTQERVAK 1225

Query: 1147 LLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD-ELDKSDARAEEER-------MKI 1198
            LL        E+D L K + E LW +DLD    +   +L+  + RA++ R        K+
Sbjct: 1226 LLRQMGDKELEIDALIKLSKEDLWRRDLDEFIAEWRYQLEDEERRAKKSRSYGRRTSTKL 1285

Query: 1199 KGNGNG-------DAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTK-VVKPKGR 1250
            K  G         D G    A +A K A  N  K          G +D + K   KPK +
Sbjct: 1286 KTAGPAAKKRKATDGGDSDFAPKAKKTAIVNKVKPKG-------GLLDYLGKSSAKPKPK 1338

Query: 1251 A-GLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLAST 1286
            + GL    A  +DD E + +P +K R A   +  A T
Sbjct: 1339 STGLDG--ASDMDDSEAEVMPRVKARAAPTKKPQAIT 1373


>gi|328353447|emb|CCA39845.1| DNA topoisomerase II [Komagataella pastoris CBS 7435]
          Length = 1312

 Score = 1150 bits (2976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 608/1293 (47%), Positives = 840/1293 (64%), Gaps = 98/1293 (7%)

Query: 9    LTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTM 68
            +  S N      TA N  + + YQK SQLEHIL RPDTYIGS+EKH    WIY +E+++M
Sbjct: 45   VNNSENGTTRSSTANNVNVSDQYQKLSQLEHILKRPDTYIGSVEKHESEQWIYNKETESM 104

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIH 128
              + +S VPGL+KIFDEILVNAADNK RDP M  ++V I  E +LI V N G G+PV+IH
Sbjct: 105  ERKVVSIVPGLFKIFDEILVNAADNKIRDPSMKNIEVTIKPEENLIEVKNDGKGIPVQIH 164

Query: 129  QEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKY 188
             +E +Y+PELIFG+LLTSSNY+D+ KK TGGRNGYGAKL NIFSTEFI+ET D    K Y
Sbjct: 165  DKEHIYIPELIFGNLLTSSNYNDDQKKVTGGRNGYGAKLCNIFSTEFIVETYDKSSGKLY 224

Query: 189  KQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGC 248
             Q ++ NMGK  +P I   K+   +TKVSF+PDLAKFNMT L++D++ ++++RV DL G 
Sbjct: 225  TQRWSQNMGKTDKPVIKSIKKATEYTKVSFRPDLAKFNMTELDEDILGVLRRRVFDLCGS 284

Query: 249  LGKSVKVELNGHRVPVKSFAEYVDMYPKSV-------------------------TRFHE 283
            + + + V+LNG ++ +++F +YV+MY K++                         T  ++
Sbjct: 285  V-RDISVKLNGEKLKIRNFKQYVEMYVKALEHKNDPIKTEDSSLLPPPSSSSPSQTIVYQ 343

Query: 284  RVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVK 343
             +N+RWEI   +S+  F QVSFVN IAT  GGTHV+++A+Q+   +   +  KNK A +K
Sbjct: 344  TLNDRWEIAFAVSDSTFNQVSFVNSIATTSGGTHVNFIADQIVKKIEKEIKTKNKKAMIK 403

Query: 344  AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSK-CELSEEFLKKVTAKSGIVET 402
               +KN++++F+N L++NPAF SQTKE LT R S FG K  E+ ++F+KK+  ++GIV+ 
Sbjct: 404  PFQIKNNMFLFINCLVENPAFTSQTKEQLTTRASQFGGKKTEVPDDFIKKIL-RTGIVDA 462

Query: 403  LLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMA 462
            +L  A     K LKKNDG++   + G  KLEDAN AG +   +CTLILTEGDSA +LA+A
Sbjct: 463  ILDIAAMNADKALKKNDGSRKNRITGYPKLEDANKAGTKEGYKCTLILTEGDSASSLAVA 522

Query: 463  GLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLR 520
            GL+VVGRD +GV+PLRGK+LNVREAS++Q++ N+EI  IK+I+G +    Y   N+ SLR
Sbjct: 523  GLAVVGRDYYGVYPLRGKMLNVREASADQIMKNAEIQAIKQIMGFQHKKNYTPENINSLR 582

Query: 521  YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
            YGH+MIMTDQ                            DHDGSHIKGL+INF+ S +P L
Sbjct: 583  YGHIMIMTDQ----------------------------DHDGSHIKGLIINFLESSFPGL 614

Query: 581  LKIPSFLVEFITPIVKATNKNG----KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
            LK+P+FL+EFITPIVK T  +G    KV+ FYSMP+YEAW+E    N  S+  KYYKGLG
Sbjct: 615  LKVPNFLLEFITPIVKVTITSGPEKRKVIPFYSMPEYEAWREQ---NTESFKQKYYKGLG 671

Query: 637  TSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQK 696
            TS ++E +EYF  +  H K F    D D   I+LAFSKKK + RK+WL  FEPG HLD  
Sbjct: 672  TSLAEEMREYFSQLDKHMKTFHALQDVDPGFIDLAFSKKKADDRKEWLRGFEPGVHLDPD 731

Query: 697  EKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSG 756
               I  SDF+NKELILFSMAD  RSIPSM+DG KP QRKIL+  +KRN   E KV+Q +G
Sbjct: 732  LSIIPISDFINKELILFSMADNIRSIPSMLDGFKPSQRKILYGCYKRNLRSEIKVSQLAG 791

Query: 757  YVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTR 816
            Y+ EHSAYHHG+QSL  +I+G+AQDFVGSNN+NLLQP G FG+R QGGKDA++ARYIFT 
Sbjct: 792  YIGEHSAYHHGDQSLIQSIIGLAQDFVGSNNLNLLQPIGGFGSRAQGGKDASAARYIFTD 851

Query: 817  LSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNP 876
            LS ITR +F  DD+ LL+YL +D Q +EP WY+PI+P +L+NGSEGIGTGWS+ IP +NP
Sbjct: 852  LSKITRKIFHVDDNPLLNYLQDDEQTVEPEWYLPIVPMLLINGSEGIGTGWSTNIPPFNP 911

Query: 877  RDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKE 936
             DIVAN+RRL++G+ ME M PWYRG+ G+I K ++ +    + + G IE++++ T+ I E
Sbjct: 912  VDIVANIRRLMDGQEMEEMIPWYRGWNGSITKISADK----FRMEGNIEQIDDETIEITE 967

Query: 937  LPIRRWTQDYREFLESII---DQNDSFIRGF-RQYSDDTTVDFEVFLSEESMMRTKQEGL 992
            +P + WT + +EFL + I   ++  S+I+    Q+  D  + F + L++E M ++ Q GL
Sbjct: 968  IPAKTWTINMKEFLLNGIAGSEKQKSWIKDMEEQHGMD--LKFVITLTKEEMKKSLQMGL 1025

Query: 993  LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
             ++FKL TTI+  NM  FD+ G IKKYD   +I+E+++H+RL+FY++RK    E L  +L
Sbjct: 1026 KERFKLITTINVGNMVAFDAAGKIKKYDNVNEIIEDYYHVRLDFYQRRKDHLAEVLGNQL 1085

Query: 1053 LKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSI------EAVVAGA 1106
             K+ ++ RF+  ++  E+ VNNRKR +L+ EL++  F  F K+ K I      E +    
Sbjct: 1086 EKISSQARFVKMIIENELRVNNRKRIELIEELQRLNFPKFSKDGKPIWQQVDQEEITEAE 1145

Query: 1107 TDETEESEENPEVVNGV-QSID----YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
                EE EE  +  N + +S++    YDYLL M I +LT E+   LL  + +  +++ +L
Sbjct: 1146 IKVEEEEEEEIDDENLLNKSVNIFASYDYLLGMPIWSLTRERYHKLLLQKAEKEDQLTEL 1205

Query: 1162 RKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNG------------NGDAGPK 1209
             K + + +W KDL+    +     K D        K  G              N +  P 
Sbjct: 1206 LKLSAKQIWNKDLEVFLEEWHAFLKEDEEKRASSFKKSGPAAKKKRVRRVKKENDENDPD 1265

Query: 1210 IVAKRAPKNARKNDKKSNNARATEAMGEMDNVT 1242
              +K+    A+K        ++   MG + ++T
Sbjct: 1266 FGSKKPKTVAKKVLNPKTKPKSASLMGSLSDIT 1298


>gi|25006381|dbj|BAC24010.1| DNA topoisomerase II [Trichophyton rubrum]
          Length = 1097

 Score = 1150 bits (2976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 589/1136 (51%), Positives = 790/1136 (69%), Gaps = 62/1136 (5%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNA
Sbjct: 2    YQKITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNA 61

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+
Sbjct: 62   ADNKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEQIYIPELIFGHLLTSSNYN 121

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM    +  I++CK G
Sbjct: 122  DMQEKVTGGRNGYGAKLCNIFSKEFTVETADSKQKKKFKLTWTNNMSTMGKAKITECK-G 180

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+P+KSF +Y
Sbjct: 181  DDYTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTAVK--LNGTRIPIKSFKKY 238

Query: 271  VDMYPKSVTR---------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGG 315
            ++MY K++                   E  + RWEI  T+S+G FQQVSFVN IAT  GG
Sbjct: 239  MEMYTKAIKAERGEDPTSASDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGG 298

Query: 316  THVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            THV+Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT 
Sbjct: 299  THVNYISDQICNKLADALKKKNKTGATLKATQIKNHIFLFVNSQIVNPAFTSQTKEQLTT 358

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED 434
            R S FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL D
Sbjct: 359  RPSQFGSKCVVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTD 416

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  
Sbjct: 417  ANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISK 476

Query: 495  NSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
            N+EI NIK  +GL+   EY + + LRYGHLMIMTD                         
Sbjct: 477  NAEIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTD------------------------- 511

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSM 610
               QD+DGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++
Sbjct: 512  ---QDYDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHTKSFFTL 568

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+YE WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IEL
Sbjct: 569  PEYEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIEL 627

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AFSKKK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLK
Sbjct: 628  AFSKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINKELILFSMADNIRSIPSVVDGLK 687

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+L+  FKRN  ++ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN 
Sbjct: 688  PGQRKVLYTMFKRNVRRDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINC 747

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+P+G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P
Sbjct: 748  LEPSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNVDDGKVIEPETYVP 807

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTA 910
            ++P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ GE + PM PW+RGF G  E T 
Sbjct: 808  VVPLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMAGEELVPMKPWFRGFKG--EVTG 865

Query: 911  SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYS 968
            S   G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+
Sbjct: 866  S---GDRYKFSGIIKQTGDNEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYN 922

Query: 969  DDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
              T V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  
Sbjct: 923  THTNVHFVIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRA 982

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ +R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++KG
Sbjct: 983  FYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQELQEKG 1042

Query: 1089 FTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            F PFPK   + E   AG  +E E+ EE       V S  YDYLLSM + +LT E+V
Sbjct: 1043 FKPFPKVVGTPEPGEAGDIEEEEDEEEETASA-AVSSDAYDYLLSMPLWSLTHERV 1097


>gi|323455286|gb|EGB11155.1| hypothetical protein AURANDRAFT_22331, partial [Aureococcus
            anophagefferens]
          Length = 1228

 Score = 1150 bits (2975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1218 (50%), Positives = 808/1218 (66%), Gaps = 83/1218 (6%)

Query: 9    LTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTY----------IGSIEKHTQAL 58
            + T+N A    P   +KTIEE YQKK+QLEHILLRPDTY          +GSIE  TQ +
Sbjct: 8    METTNAAPKKAPGKKSKTIEETYQKKTQLEHILLRPDTYSAPAAPETARLGSIEMSTQPM 67

Query: 59   WIYEEESKTMIHRTISY----VPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLI 114
            W+   ++K ++ R ++Y    VPGL+KIFDEI+VNAADNKQRDP M  +KV ID   + I
Sbjct: 68   WVLNPDTKRIVRRNVTYARRGVPGLFKIFDEIMVNAADNKQRDPSMTTIKVDIDVAANSI 127

Query: 115  SVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTE 174
            SV N G G+PVE+H E G YVPELIFGHLLT SN+DDN KKTTGGRNGYGAKL NIFS +
Sbjct: 128  SVGNDGKGIPVEMHGEHGCYVPELIFGHLLTGSNFDDNEKKTTGGRNGYGAKLANIFSKK 187

Query: 175  FIIETADGKRLKKYKQVFTNNM-GKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDD 233
            F +ETAD K  +K  Q + +NM G +    IS  K   ++T+V+F+PDLA+F M  L+DD
Sbjct: 188  FTVETADSKSGRKLSQTWEHNMSGTQGPAKISPHKNKKDFTRVTFEPDLARFKMDRLDDD 247

Query: 234  VVALMKKRVVDLAG---CLGKSVKVELNGHRVPVKSFAEYVDMY-----PKSVTRFHERV 285
            +VAL+ KR  D+A    C G S+KVELNG RVPVKSFA+YV ++     P ++    ERV
Sbjct: 248  IVALLSKRAYDVAASASCHGSSLKVELNGERVPVKSFAQYVALHDGLEPPAAL----ERV 303

Query: 286  NERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAH 345
            ++RW + V  S+G FQ +SFVN I T KGG+HV+YVA+Q+   + A V KKNK   VK  
Sbjct: 304  DDRWTVGVAPSDGTFQHLSFVNSICTSKGGSHVNYVADQITAKLAAAVKKKNKGQEVKPA 363

Query: 346  NVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLS 405
             +K HL V+V+A+I NPAFDSQTKETLT ++ +FGSKC L ++FLK +  KSG+V+ +L+
Sbjct: 364  FIKAHLCVYVDAMIVNPAFDSQTKETLTTKEKAFGSKCVLPDKFLKAIE-KSGVVDRVLA 422

Query: 406  WANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLS 465
            W  FKQ + LK+  G+K   + GI+KL+DAN AGG   + CTLILTEGDSAKALA++GL 
Sbjct: 423  WTKFKQDEQLKRKGGSKKTRLTGITKLDDANAAGGARGKDCTLILTEGDSAKALAVSGLG 482

Query: 466  VVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGH 523
            VVGRD +GVFPL+GK LNVREAS   ++ N E+ N+ KILGL+ GV Y+  N+K+LRYGH
Sbjct: 483  VVGRDLYGVFPLKGKPLNVREASHAAIMKNEEVQNVVKILGLRFGVTYDEANLKTLRYGH 542

Query: 524  LMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI 583
            LMIMTDQ                            DHDGSHIKGLLIN +H FWPSLL+I
Sbjct: 543  LMIMTDQ----------------------------DHDGSHIKGLLINCLHHFWPSLLQI 574

Query: 584  PSFLVEFITPIVKAT--NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSK 641
            P FL  FITPIVKAT   K+     F+++P+YEAWKE+ GG     +IKYYKGLGTST+K
Sbjct: 575  PGFLRCFITPIVKATPAAKSKPAEVFFTLPEYEAWKEARGG-LHGHAIKYYKGLGTSTAK 633

Query: 642  EGKEYFQNITLHKKDFVWEDD--QDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKY 699
            E KEYF  +  H+ D+   D+  ++G+ I++AFSKK++E RK WL   EPG  +D     
Sbjct: 634  EAKEYFGELDTHQLDYATLDESAREGDLIDMAFSKKRVEDRKTWLRNLEPGTFVDYAVDA 693

Query: 700  IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVS 759
            + Y DFVNKELILFS+AD QRSIPS+VDGLKP QRK+LF  FKR   KE KVAQ +GYVS
Sbjct: 694  MSYGDFVNKELILFSVADNQRSIPSVVDGLKPSQRKVLFACFKRKLKKEIKVAQLAGYVS 753

Query: 760  EHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSP 819
            EH+AYHHGE SL  TI+GMAQDFVGSNN+NLL P GQFGTR  GGKDAAS+RYIFT+L  
Sbjct: 754  EHAAYHHGEMSLTGTIVGMAQDFVGSNNVNLLTPAGQFGTRIMGGKDAASSRYIFTKLEA 813

Query: 820  ITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDI 879
            + R +F  DDD +LDYL +DGQ IEPT+Y+P++P  L NG++GIGTGW++ +PNY PR +
Sbjct: 814  VARKVFHPDDDFVLDYLEDDGQSIEPTYYVPVLPFALCNGADGIGTGWATSVPNYAPRAL 873

Query: 880  VANVRRLLNGEM-MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELP 938
            +  +RR+++ ++    + P YRGFGG I     K AG  + V G    +++ T+ + ELP
Sbjct: 874  IGVLRRMIDADVGAADLAPHYRGFGGDIVAKGGKNAG-AFAVLGRATRLDDVTVLVDELP 932

Query: 939  IRRWTQDYREFLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQE---GL 992
               WT DY+++LE  +   D+  ++++ F++   DT V F V +++   +   +    GL
Sbjct: 933  ---WTHDYKQWLEVQLSGDDKTKAWVKDFKENHTDTRVSFTVTVTKGEDLDDAEAALGGL 989

Query: 993  LKKFKLTTTISTSNMHLFDSKG-VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
             KKFKL  +++TSNM+ FD  G VI KYD P  +++ F+ +R+  Y KRK   ++     
Sbjct: 990  EKKFKLEGSLATSNMNFFDDTGLVIDKYDAPFDVIKAFYKVRVATYAKRKAHLVKAKRAR 1049

Query: 1052 LLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETE 1111
            +  L NKVRF+L V++G++VV NRKR +LL +L   G+      +   +       D   
Sbjct: 1050 VSLLRNKVRFVLSVLSGDLVVQNRKRAELLAQLVDDGYDAVYNAAAKKKTPAKADDDGDA 1109

Query: 1112 ESEENPEVVNGVQSI--------DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
               +  +   G  +          YDYLLSM I +LT+E+V  L A+    + E+  L  
Sbjct: 1110 SGSDGDDDGAGAAAGSSDAQLAKGYDYLLSMKIWSLTMERVDALRAELKDEDAELVALVA 1169

Query: 1164 ATPESLWVKDLDALDMQL 1181
                ++W+ DL  L+ +L
Sbjct: 1170 KPETAIWLDDLADLEAEL 1187


>gi|195119011|ref|XP_002004025.1| GI19824 [Drosophila mojavensis]
 gi|193914600|gb|EDW13467.1| GI19824 [Drosophila mojavensis]
          Length = 1431

 Score = 1150 bits (2975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 637/1407 (45%), Positives = 871/1407 (61%), Gaps = 152/1407 (10%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE+MYQKKSQLEHILLRPD+YIGS+E   + +W+++ E   M+ R IS+VPGLYKIFDE
Sbjct: 9    SIEQMYQKKSQLEHILLRPDSYIGSVEFTKELMWVHDAEKNRMVQREISFVPGLYKIFDE 68

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M+ +KV ID E +++S+ N+G G+PV +H+EE +YVP +IFGHLLT
Sbjct: 69   ILVNAADNKQRDKSMNTIKVDIDPERNIVSIWNNGQGIPVTMHKEENMYVPTMIFGHLLT 128

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKL NIFS  F +ETA  +  K +KQ + NNM K  +P I 
Sbjct: 129  SSNYNDDEKKVTGGRNGYGAKLCNIFSNSFTVETATKQYKKSFKQTWGNNMSKAGDP-II 187

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G ++T+++F PDL+KF M  L+ D+VALM +R  D+A    K V V LNG +VPV+
Sbjct: 188  KDFNGSDYTRITFSPDLSKFKMESLDSDIVALMSRRAYDIAAST-KGVSVFLNGTKVPVR 246

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F EY+D++ K+        +   +E   ERWE+    S+  FQQVSFVN IAT KGG H
Sbjct: 247  GFKEYIDLFVKNTDDDAGQPIKVVYEACGERWEVACCPSDRGFQQVSFVNSIATTKGGRH 306

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD+V + V   ++ V+ KKNKN  ++K   V+NHLW+FVN LI+NP FDSQTKE +TL+ 
Sbjct: 307  VDHVVDNVIKQLIEVLKKKNKNGISIKPFQVRNHLWIFVNCLIENPTFDSQTKENMTLQA 366

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
             SFGSKC  SE+F+  V AK+GIVE++L+WA FK   D+ K  G K+  ++GI KLEDAN
Sbjct: 367  KSFGSKCTFSEKFIANV-AKAGIVESVLAWAKFKAQNDIAKTGGKKSHKIKGIPKLEDAN 425

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG +NS  CTLILTEGDSAK+LA++GL V+GR+ +GVFPLRGKLLNVREA+  Q+  N+
Sbjct: 426  EAGTKNSINCTLILTEGDSAKSLAVSGLGVIGRNYYGVFPLRGKLLNVREATFKQLTENA 485

Query: 497  EIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            EI N+ KI+GL+   +Y   +++K+LRYG +MIMTDQ                       
Sbjct: 486  EINNLCKIIGLQYKKKYLTMDDLKTLRYGKVMIMTDQ----------------------- 522

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
                 D DGSHIKGLLINFIH+ WP LL++P FL EFITPIVKAT KN ++ SFYS+P++
Sbjct: 523  -----DQDGSHIKGLLINFIHTNWPELLRLP-FLEEFITPIVKATKKNEEI-SFYSLPEF 575

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
            E WK     N  +++IKYYKGLGTSTSKE KEYFQ++  H+  F ++   D + I +AF+
Sbjct: 576  EEWKMDTP-NHHTYNIKYYKGLGTSTSKEAKEYFQDMERHRILFKYDGQVDDDNIVMAFA 634

Query: 674  KKKIEARKKWLLQFEPGNHLDQKE-----------------KYIKYSDFVNKELILFSMA 716
            KK +E+RK WL      NH+D+ +                 K++ YSDF+N EL+LFS A
Sbjct: 635  KKHVESRKTWLT-----NHMDEVKRRKQLGLPERYLYTKGTKHVSYSDFINLELVLFSNA 689

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D +RSIPS+VDGLKPGQRK++F  FKRN  +E KVAQ SG V+E SAYHHGE SL  TI+
Sbjct: 690  DNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLSGSVAEMSAYHHGEMSLQMTIV 749

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQ+FVGSNNINLL+P GQFGTR  GGKD ASARYIFT +SP+TR ++   DD LL Y 
Sbjct: 750  NLAQNFVGSNNINLLEPRGQFGTRLTGGKDCASARYIFTLMSPLTRLIYHPLDDPLLQYQ 809

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +DGQ+IEP WY+PIIP VLVNG+EGIGTGWS+ I NYNPRD++ N+RR++N E   P+H
Sbjct: 810  VDDGQRIEPLWYIPIIPMVLVNGAEGIGTGWSTKIANYNPRDMITNLRRMINNEEPLPLH 869

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE----FLES 952
            PWY+ F GT+E  +       Y  +G ++ + +  + I ELPI  WTQ+Y+E     L +
Sbjct: 870  PWYKNFTGTMEYVSDGR----YVHSGNVQILPDNRIEITELPIGVWTQNYKENVLEVLSN 925

Query: 953  IIDQNDSFIRGFRQYSDDTTVDFEVFLS--EESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
              ++  + I  +R+Y  DTTV F +  +  E   +R+++ G  +  KL+++IST+ MH F
Sbjct: 926  GTEKVKAIISDYREYHTDTTVRFVITFAPGEFERLRSEEGGFHRVLKLSSSISTNQMHAF 985

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    ++++ TP+ IL EF+ +RLE+Y +RK   +  L  +  +L ++ RFIL     ++
Sbjct: 986  DENNCLRRFPTPKDILVEFYKLRLEYYNRRKDYLVGQLTAQADRLSDQARFILEKCEKKL 1045

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP----------------KNSKSIEAVVAGATDETEESE 1114
            V+ N++R  ++ EL ++G+ P P                ++ +  E    GA+ +  + E
Sbjct: 1046 VIENKQRKMMIDELIKRGYRPDPVKEWQRRIKMEDAEAAEDDEEEEESSVGASSKKIKKE 1105

Query: 1115 ENPEVVNGVQSI----DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLW 1170
             +PE     Q +     +DYLL M++  LT E+   LL  RD    E+D+L K TP  LW
Sbjct: 1106 VDPE--KAFQKLTEVKKFDYLLGMSMWMLTEERKNELLKQRDLKIAELDNLMKKTPSHLW 1163

Query: 1171 VKDLDALDMQLDE-----------LDKSDARAEEERMKIKGN--------GNGDAGPKIV 1211
            + DLD L+ +L E           ++   A+A + +    G         GN D  P  +
Sbjct: 1164 LDDLDNLEQKLTEVEEKERLEEQGINLKQAKAMKGQKPAAGRAKKGGKSAGNADIFPDPI 1223

Query: 1212 AKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPD 1271
             +R          K   A    A+   + +TKV   K          +  D   E   P 
Sbjct: 1224 GERVAFKVTDEIIKKFQAATNTAVKTKERMTKVKAVKKEETTADKEVDDFDLLVEGGAPK 1283

Query: 1272 -------------------------LKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVP 1306
                                     LKQ   KL+   +  K + S D SG +  E   VP
Sbjct: 1284 TSPKAKKAPKKEPAEKKPKKQNGDGLKQ--GKLD--FSKGKKKESLDSSGELAEE---VP 1336

Query: 1307 AKKKEPSKRTAAQKKVVTVETSDSEDE 1333
             + + P +R A++K   +   SD E E
Sbjct: 1337 -RVERPGRRAASKKINYSFLISDEEGE 1362


>gi|25006385|dbj|BAC24012.1| DNA topoisomerase II [Trichophyton violaceum]
          Length = 1094

 Score = 1150 bits (2974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 589/1134 (51%), Positives = 788/1134 (69%), Gaps = 62/1134 (5%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNA
Sbjct: 1    YQKITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNA 60

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+
Sbjct: 61   ADNKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEQIYIPELIFGHLLTSSNYN 120

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM    +  I++CK G
Sbjct: 121  DMQEKVTGGRNGYGAKLCNIFSNEFTVETADSKQKKKFKLTWTNNMSTMGKAKITECK-G 179

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+P+KSF +Y
Sbjct: 180  DDYTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTAVK--LNGTRIPIKSFKKY 237

Query: 271  VDMYPKSVTR---------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGG 315
            ++MY K++                   E  + RWEI  T+S+G FQQVSFVN IAT  GG
Sbjct: 238  MEMYTKAIKAERGEDTTSASDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGG 297

Query: 316  THVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            THV+Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT 
Sbjct: 298  THVNYISDQICNKLADALKKKNKTGATLKATQIKNHIFLFVNSQIVNPAFTSQTKEQLTT 357

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED 434
            R S FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL D
Sbjct: 358  RPSQFGSKCVVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTD 415

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  
Sbjct: 416  ANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISK 475

Query: 495  NSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
            N+EI NIK  +GL+   EY + + LRYGHLMIMTDQ                        
Sbjct: 476  NAEIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ------------------------ 511

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSM 610
                DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++
Sbjct: 512  ----DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHTKSFFTL 567

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+YE WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IEL
Sbjct: 568  PEYEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIEL 626

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AFSKKK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLK
Sbjct: 627  AFSKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINKELILFSMADNIRSIPSVVDGLK 686

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+L+  FKRN  ++ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN 
Sbjct: 687  PGQRKVLYTMFKRNVRRDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINC 746

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+P+G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P
Sbjct: 747  LEPSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNVDDGKVIEPETYVP 806

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTA 910
            ++P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ GE + PM PW+RGF G  E T 
Sbjct: 807  VVPLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMAGEELVPMKPWFRGFKG--EVTG 864

Query: 911  SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYS 968
            S   G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+
Sbjct: 865  S---GDRYKFSGIIKQTGDNEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYN 921

Query: 969  DDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
              T V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  
Sbjct: 922  THTNVHFVIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRA 981

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ +R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++KG
Sbjct: 982  FYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQELQEKG 1041

Query: 1089 FTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLE 1142
            F PFPK   + E   AG  +E E+ EE       V S  YDYLLSM + +LT E
Sbjct: 1042 FKPFPKVVGTPEPGEAGDIEEEEDEEEETASA-AVSSDAYDYLLSMPLWSLTHE 1094


>gi|425768541|gb|EKV07062.1| DNA topoisomerase 2 [Penicillium digitatum PHI26]
 gi|425775683|gb|EKV13939.1| DNA topoisomerase 2 [Penicillium digitatum Pd1]
          Length = 1758

 Score = 1149 bits (2972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1227 (49%), Positives = 823/1227 (67%), Gaps = 80/1227 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK +QLEHI+ RPDTYIGS E+ TQ +W+Y   ++ M +R +S+VPGLYKIFDEI+VNA
Sbjct: 132  YQKLTQLEHIIKRPDTYIGSTERTTQHMWVYNSGTEAMEYREVSFVPGLYKIFDEIVVNA 191

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK  D  M+ +++ ID+E   ISV N+G G+P+EIH  E +YVPELIFGHLLTSSNYD
Sbjct: 192  ADNKHNDSSMNEMRITIDREAGEISVWNNGRGIPIEIHSREKIYVPELIFGHLLTSSNYD 251

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ +K TGGRNG+GAKL N+FSTEF +ET D ++ KKYKQ +T NM K  +  I+  K G
Sbjct: 252  DSQQKVTGGRNGFGAKLCNVFSTEFTLETQDSRQKKKYKQTWTENMTKMGKAKITDAK-G 310

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++TKV+FKPD A+F M  ++DD  AL+ +RV DLAG    +V V+LNG RVPV++F +Y
Sbjct: 311  DDYTKVTFKPDFARFGMDGIDDDFEALVMRRVYDLAGTA--NVGVKLNGTRVPVRNFRKY 368

Query: 271  VDMYPKSVTRFHE-------------RVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++MY K++ +  +             + + RWEI   +S+G FQQVSFVN IAT  GGTH
Sbjct: 369  MEMYTKAIRKERDDDGPPSKDEIITCQPDPRWEIGFAVSDGSFQQVSFVNSIATTSGGTH 428

Query: 318  VDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+Y+A+Q+   +   V KKNK+ A +K+  ++NH+++FV ALI NPAF+SQTKE LT + 
Sbjct: 429  VNYIADQICTRLADQVKKKNKSGATLKSAQIRNHIFIFVKALIVNPAFNSQTKEQLTTKA 488

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSKC L E+F KKV  K+ ++  +L +A  K  + LKK++  +   +    KL DAN
Sbjct: 489  SQFGSKCSLDEDFYKKVL-KTEVMSNILHFAEQKADQILKKSETGRRTRMNN-PKLVDAN 546

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG R    CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N 
Sbjct: 547  KAGTREGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASFDQISKNV 606

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI +IK  +GL+   EY   K LRYGH+MIMTDQ                          
Sbjct: 607  EIQSIKNFIGLQHKKEYTETKGLRYGHIMIMTDQ-------------------------- 640

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---ATNKN-GKVLSFYSMPD 612
              DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPI+K      KN  K  SF++MP+
Sbjct: 641  --DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIIKVWKGDPKNPTKQKSFFTMPE 698

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA--IEL 670
            ++ W+++   +   W  KYYKGLGTST+++ + YF+++  H K+F     QDGEA  IEL
Sbjct: 699  HDEWRQA-HKHERGWQHKYYKGLGTSTTEDAQVYFRDLDRHLKEF--HTMQDGEAGLIEL 755

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AFSKKK + RK+WL Q++PG +LD     I Y+DF+NKELILFSMAD QRSIPS+VDGLK
Sbjct: 756  AFSKKKADERKEWLRQYKPGTYLDHSVAKITYTDFINKELILFSMADNQRSIPSVVDGLK 815

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+L   F RN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ FVGSNNIN 
Sbjct: 816  PGQRKVLHTCFIRNLKKDMKVVELAGHVSGMTAYQHGDVSLQQTIVGLAQTFVGSNNINC 875

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+P+G FG+R QGG D ASARYI+TRLSP  R +F   D+ LL Y  +DG++IEP  ++P
Sbjct: 876  LEPSGNFGSRLQGGGDCASARYIYTRLSPFARKIFHAADEPLLTYNEDDGKKIEPEVFIP 935

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTA 910
            ++P +L+NG++GIGTGWSS IPNYNP D+V N++RL+ GE  EPM PW+RGF G +    
Sbjct: 936  VVPMILINGADGIGTGWSSSIPNYNPEDVVNNLKRLMAGEPTEPMQPWFRGFTGEVVAV- 994

Query: 911  SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYS 968
                G  Y  +GII E  E  + I ELP+R WTQD+++ LE II  ++  SFI+ +R Y+
Sbjct: 995  ---GGDRYKFSGIIRECGEKEVEITELPLRTWTQDFKDKLEEIIKAEKVPSFIKDYRDYN 1051

Query: 969  DDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
              T V F + L E+ M     EGL +KFKLT +I+T+N+  FD +G I KY T + IL+E
Sbjct: 1052 THTKVHFIIQLDEKHMKAALSEGLEEKFKLTKSIATTNLVAFDPEGRITKYATVDDILKE 1111

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ +RL++YE+RK+ QL NL+ EL KL N+ RF+  +++G++V++ +K+  L+ EL++KG
Sbjct: 1112 FYVVRLKYYERRKQFQLSNLQRELEKLSNQARFVQMIIDGKLVISKKKKPVLITELKEKG 1171

Query: 1089 FTPFPKNSKSI-----EAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEK 1143
            F P  K +++      EAVV    +E E+  ++P     V S  +DYLL M + +LT E+
Sbjct: 1172 FKPIAKVAEAAKMGEDEAVVEEGLEEGEDESDDPNA--EVLSSSFDYLLGMPMWSLTQER 1229

Query: 1144 VQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD-ELDKSDARAEEE-----RMK 1197
            V+ L +   +   EVD L K + E +W +DL+    +   +L+  D RA +E     R+ 
Sbjct: 1230 VEKLRSQIGEKETEVDVLIKLSKEDIWNRDLEEFIKEWRFQLEDEDRRARKEAGLGCRVP 1289

Query: 1198 IK-GNGNGDAGPKIVAKRAPKNARKND 1223
             K   G G    ++ A R  K A  +D
Sbjct: 1290 TKLATGGG----RVAASRKRKAANGDD 1312


>gi|7388329|sp|Q9Y8G8.1|TOP2_PENCH RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|5441259|dbj|BAA82356.1| type II DNA topoisomerase [Aspergillus terreus]
          Length = 1587

 Score = 1149 bits (2972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 591/1171 (50%), Positives = 788/1171 (67%), Gaps = 65/1171 (5%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEI 86
            + E YQK +QLEHI+ RPDTY+GS E+ TQ +W+Y  ES+ M +R +SYVPGLYKIFDEI
Sbjct: 64   VSEKYQKLTQLEHIIKRPDTYVGSTERTTQHMWVYSSESEGMEYREVSYVPGLYKIFDEI 123

Query: 87   LVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
            +VNAADNKQ D  MD ++V ID+E   ISV N+G G+P+E+H +E +YVPELIFGHLLTS
Sbjct: 124  VVNAADNKQNDKNMDEIRVTIDRESGEISVWNNGRGIPIEMHSKEKMYVPELIFGHLLTS 183

Query: 147  SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            SNYDD   K TGGRNG+GAKL N+FSTEF IET D ++ KKYKQ +T NM K  +  I+ 
Sbjct: 184  SNYDDTQMKVTGGRNGFGAKLCNVFSTEFTIETQDSRQKKKYKQTWTENMTKMGKAKITD 243

Query: 207  CKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
             K G ++TKV+FKPD AKF MT ++DD  AL+K+RV DLAG     V V+LNG R+P+++
Sbjct: 244  AK-GADYTKVTFKPDYAKFGMTGMDDDFEALVKRRVYDLAGTA--KVAVKLNGSRIPIRN 300

Query: 267  FAEYVDMYPKSVTRFHER---------------VNERWEICVTLSEGQFQQVSFVNGIAT 311
            F  Y++MY K++ R  ER                + RWE+   +S+G FQQVSFVN IA 
Sbjct: 301  FKMYMEMYTKAIRR--ERGDMGPAGKNEIITCSPDPRWEVGFAVSDGAFQQVSFVNSIAI 358

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
              GGTHV+Y+A+Q+ + +   V KKNKN A +K   ++NH+++FVNALI NPAF SQTKE
Sbjct: 359  TSGGTHVNYIADQICSKLAEQVKKKNKNGATLKPAQIRNHIFIFVNALIVNPAFTSQTKE 418

Query: 371  TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGIS 430
             LT +QS FGSKC L E+F KK+  K+ ++  +L +A  K  + LKK DG +   +    
Sbjct: 419  QLTTKQSQFGSKCVLEEDFYKKIL-KTEVMTNILHFAQQKADQMLKKTDGGRRSRMNN-P 476

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KL DAN AG +    CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +
Sbjct: 477  KLTDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASFD 536

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            Q+  N EI NIK  +GL+   EY + + LRYGHLMI TDQ                    
Sbjct: 537  QIAKNQEIQNIKNFIGLQHKKEYTDTRGLRYGHLMITTDQ-------------------- 576

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLS 606
                    DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPIVK    +     K  S
Sbjct: 577  --------DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIVKVWKGDPKNPTKQRS 628

Query: 607  FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
            F++MP+YEAWKE   G+   W  KYYKGLGTST+++ + YF+++  H K+F    D + E
Sbjct: 629  FFTMPEYEAWKEE-HGHERGWEHKYYKGLGTSTTEDAQIYFRDLDRHLKEFHTMQDNEVE 687

Query: 667  AIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
             IELAFSKKK + RK  + QF PG  LD     I Y+DF+NKELILFSMAD  RSIPS+V
Sbjct: 688  LIELAFSKKKADERKGNVRQFRPGTFLDHSVDKITYTDFINKELILFSMADNIRSIPSVV 747

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DGLKPGQRK+L+  F+RN  K+ KV + +G+VS  +AY HGE SL  TI+G+AQ FVGSN
Sbjct: 748  DGLKPGQRKVLYTCFRRNLKKDMKVVELAGHVSGTTAYQHGEGSLQQTIVGLAQTFVGSN 807

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            N+N L+P+G FG+R QGG D ASARYI+TRL P  R +F   DD LL Y  +DG +IE  
Sbjct: 808  NVNCLEPSGNFGSRLQGGADCASARYIYTRLWPFARRVFHNHDDPLLTYNEDDGAKIEQE 867

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI 906
             Y+P++P +L+NG++GIGTGWSS  PNYNP DIV N++R+++GE ++PM PW+RGF G +
Sbjct: 868  VYVPVVPMILINGADGIGTGWSSSTPNYNPEDIVENLKRMMDGEPLKPMQPWFRGFTGEV 927

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGF 964
                       +  +GII+E  +  + I ELPIR WTQD+++ LE II  ++  SFI+ +
Sbjct: 928  TAVGQDR----FKFSGIIKETGDKEVEITELPIRTWTQDFKDKLEDIIKAEKTPSFIKDY 983

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
            + Y+  T V F + + E+ M     EGL +KFKL+ T++T+N+  FD +  I KY + E 
Sbjct: 984  KDYNTHTKVHFVIQMDEKHMKTAIAEGLEEKFKLSKTMTTTNLVAFDPE-RITKYASVED 1042

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            I++EF+ +RL++YE+RK+ QL  ++ EL KL N+ RF+  +++G++V++ +K+  L+ EL
Sbjct: 1043 IMKEFYAVRLKYYERRKQYQLSEMQKELDKLSNQARFVQMIIDGKLVISKKKKAVLVAEL 1102

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            ++K F PFPK  ++++A       E EE  E       V S  YDYLL M I +LT E+V
Sbjct: 1103 KEKDFKPFPKVKEAVKAGETEPVVEEEEDSE--SGDTEVLSNSYDYLLGMPIWSLTQERV 1160

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            + L         E+D L K + E +W +DL+
Sbjct: 1161 EKLRRQIGDKELEIDTLIKLSKEDIWKRDLE 1191


>gi|189193341|ref|XP_001933009.1| DNA topoisomerase 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187978573|gb|EDU45199.1| DNA topoisomerase 2 [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1722

 Score = 1149 bits (2971), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 591/1183 (49%), Positives = 792/1183 (66%), Gaps = 70/1183 (5%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQ  + LEHI+ RPDTYIGS+E+ T  +W+Y  ES +M  R ++YVPGLYKIFDEILVNA
Sbjct: 144  YQMLTHLEHIMKRPDTYIGSVERQTDKMWVYNSESDSMEFRDVTYVPGLYKIFDEILVNA 203

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ D  M  ++V +D+E   IS+ N G G+P+EIH+E G+YVPE+IFGHLLTSSNYD
Sbjct: 204  ADNKQNDKNMSEIRVTVDRETGEISIKNDGKGIPIEIHKEHGIYVPEMIFGHLLTSSNYD 263

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ +K TGGRNGYGAKL N+FSTEF +ET D K+ KKY+Q +T NM K  +  IS  K  
Sbjct: 264  DDQQKVTGGRNGYGAKLCNVFSTEFTVETVDSKQKKKYRQTWTENMSKMGKAKISDIK-S 322

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++TKVS+K D A+F MT ++DD  A++K+R  D+AG L + VKV LNG R+ + SFA+Y
Sbjct: 323  DDYTKVSWKADYARFGMTGIDDDFEAMVKRRTYDMAGTL-RGVKVYLNGDRIKLTSFAKY 381

Query: 271  VDMYPKSVTRFHERVNE-------------RWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++MY KS++R   +  +             RW+I   +S+G F QVSFVN IAT  GGTH
Sbjct: 382  MEMYTKSISRDQGKSEDDKEKDVIITDKLDRWDIGFAVSDGSFNQVSFVNSIATTSGGTH 441

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+++A+Q+   +MA+VNKKNK A  +K   +KNHL++FVN  I NPAF SQTKE LT R 
Sbjct: 442  VNHIADQIVEKLMAIVNKKNKAAVKLKPAQIKNHLFLFVNCSIVNPAFTSQTKEQLTTRP 501

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSK  LS++FL  + AK+ +++ ++ +A  K  + +KK DG K   +   +KL DAN
Sbjct: 502  SQFGSKPVLSDKFLNAI-AKTDVIQNIMHFAQQKADQMMKKTDGNKRNRISN-AKLTDAN 559

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG ++   CTLILTEG+SA  LA+AG +VV +D FGVFPLRGKLLNVR+A+ +Q++ N+
Sbjct: 560  KAGTKDGHLCTLILTEGESASVLALAGRAVVNQDLFGVFPLRGKLLNVRDATVDQIMKNA 619

Query: 497  EIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
            EI NIKK +GL+   EY   ++KSLRYGHLMIMTDQ                        
Sbjct: 620  EIQNIKKFMGLQHKKEYTMADMKSLRYGHLMIMTDQ------------------------ 655

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSM 610
                DHDGSHIKGLLINF+   +PSLLKIP FL+EFITPIVK    + K    + SF+SM
Sbjct: 656  ----DHDGSHIKGLLINFLQCQFPSLLKIPGFLLEFITPIVKVWKGDPKNPRNMKSFFSM 711

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+YE WKE    +   W  KYYKGLGTS   + + YF+++  H K F    +++ + IEL
Sbjct: 712  PEYEEWKEQ-HQHEKGWDHKYYKGLGTSDIPDAQIYFKDLDTHMKRFQVMREEEEKLIEL 770

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AFSKKK +ARK WL  F PG HLD     I Y DFVNKELILFSMAD  RSIPS++DGLK
Sbjct: 771  AFSKKKADARKDWLRDFVPGQHLDLTTPDISYDDFVNKELILFSMADNVRSIPSVIDGLK 830

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+L+  F+RN  K+ KV + +G VS  + Y HGE S+  TI+ +AQ+FVG+NNIN 
Sbjct: 831  PGQRKVLYTCFRRNIKKDVKVVELAGSVSGSTDYAHGEASMQGTIVNLAQNFVGTNNINY 890

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+P+G FG+R +GG DAASARYI+TRLSP  R +F   DD LL Y   DG +IEP  ++P
Sbjct: 891  LEPSGNFGSRLKGGADAASARYIYTRLSPFARRIFHGHDDALLKYGESDGHKIEPEMFVP 950

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL----NGEMMEPMHPWYRGFGGTI 906
            I+PT+L+NGS GIGTGWSS IPN+NP DI+AN+RR +      + M PM PWY+GF GT 
Sbjct: 951  ILPTILINGSSGIGTGWSSEIPNFNPMDIIANIRRRMEPGATKDDMTPMIPWYKGFTGTT 1010

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGF 964
             +         Y  TG + +  +  + I ELP+R WTQD++E LE II  ++  S+I+ +
Sbjct: 1011 TEIGPDR----YQFTGTVRQTGDNEVEITELPVRYWTQDFKEKLEEIIKAEKAPSYIKDY 1066

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
              Y+    V F + + ++ M     +GL + FKL    STSN+  FD+ G I KY T   
Sbjct: 1067 IDYNTPDRVHFIIKMEDKYMAEAVTKGLEEYFKLFKPQSTSNLVAFDAHGRIHKYATVLD 1126

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            I+EEF+HIRL +YEKRK+ QL+ +E E LK+ N+ +FI  +++G++ V+ +K+  L+ EL
Sbjct: 1127 IIEEFYHIRLRYYEKRKQHQLQVMEKEHLKMTNQAKFIQMIIDGKLTVSKKKKAVLVQEL 1186

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            ++ GFTPFPK     EA  AG  ++ +E E + +    V + DYDYLL MAI +LT E+V
Sbjct: 1187 KKLGFTPFPKVE---EAKQAGEVEDYQEDEASEDADVEVSANDYDYLLGMAIWSLTQERV 1243

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDE 1183
            + L+    +   E+D L K +P+ +W  DLDA     ++QL+E
Sbjct: 1244 EKLMKQIGEKQHEIDTLIKLSPKDIWNVDLDAFMDEWNLQLEE 1286


>gi|25006383|dbj|BAC24011.1| DNA topoisomerase II [Trichophyton interdigitale]
          Length = 1093

 Score = 1148 bits (2969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 591/1133 (52%), Positives = 787/1133 (69%), Gaps = 64/1133 (5%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNA
Sbjct: 1    YQKITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNA 60

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+
Sbjct: 61   ADNKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEQIYIPELIFGHLLTSSNYN 120

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM    +  I++CK G
Sbjct: 121  DMQEKVTGGRNGYGAKLCNIFSNEFTVETADSKQKKKFKLTWTNNMSTMGKAKITECK-G 179

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+P+KSF +Y
Sbjct: 180  DDYTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTAVK--LNGTRIPIKSFKKY 237

Query: 271  VDMYPKSVTR---------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGG 315
            ++MY K++                   E  + RWEI  T+S+G FQQVSFVN IAT  GG
Sbjct: 238  MEMYTKAIKAERGEDPTSASDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGG 297

Query: 316  THVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            THV+Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT 
Sbjct: 298  THVNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNSQIVNPAFTSQTKEQLTT 357

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED 434
            R S FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL D
Sbjct: 358  RASQFGSKCVVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTD 415

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  
Sbjct: 416  ANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISK 475

Query: 495  NSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
            N+EI NIK  +GL+   EY + + LRYGHLMIMTDQ                        
Sbjct: 476  NAEIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ------------------------ 511

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSM 610
                DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    N K      SF+++
Sbjct: 512  ----DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGNPKNPTHTKSFFTL 567

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+YE WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IEL
Sbjct: 568  PEYEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIEL 626

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AFSKKK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLK
Sbjct: 627  AFSKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINKELILFSMADNIRSIPSVVDGLK 686

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN 
Sbjct: 687  PGQRKVLYTMFKRNVRKDVKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINC 746

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+P+G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P
Sbjct: 747  LEPSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNIDDGKVIEPETYVP 806

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTA 910
            ++P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ GE + PM PW+RGF G  E T 
Sbjct: 807  VVPLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMAGEELVPMKPWFRGFKG--EVTG 864

Query: 911  SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYS 968
            S   G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+
Sbjct: 865  S---GDRYKFSGIIKQTADNEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYN 921

Query: 969  DDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
              T V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  
Sbjct: 922  THTDVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRA 981

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ +R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++KG
Sbjct: 982  FYAVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQELQEKG 1041

Query: 1089 FTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID-YDYLLSMAIGTLT 1140
            F PFPK   + E   AG  D  EE +E  E      S D YDYLLSM + +LT
Sbjct: 1042 FKPFPKVVGTPEPGEAG--DVEEEEDEEEETTTAAASSDAYDYLLSMPLWSLT 1092


>gi|402900106|ref|XP_003913021.1| PREDICTED: DNA topoisomerase 2-alpha isoform 1 [Papio anubis]
          Length = 1540

 Score = 1148 bits (2969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/1213 (50%), Positives = 818/1213 (67%), Gaps = 88/1213 (7%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV- 264
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PV 
Sbjct: 207  KPFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVS 265

Query: 265  --------KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNG 308
                    K F  +  M            +   HE+VN RWE+C+T+SE  FQQ+SFVN 
Sbjct: 266  IFLDVNDNKGFCNHCQMXXXXXLDETGNPLKVIHEQVNHRWEVCLTMSEKGFQQISFVNS 325

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            IAT KGG HVDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQ
Sbjct: 326  IATSKGGRHVDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQ 385

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDV 426
            TKE +TL+  SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   +
Sbjct: 386  TKENMTLQPKSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRI 444

Query: 427  RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
            +GI KL+DAN AGGRNS  CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVRE
Sbjct: 445  KGIPKLDDANDAGGRNSTDCTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKMLNVRE 504

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFI 543
            AS  Q++ N+EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ             
Sbjct: 505  ASHKQIMENAEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ------------- 551

Query: 544  LIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK 603
                           D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN +
Sbjct: 552  ---------------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQ 594

Query: 604  VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
             ++FYS+P++E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +
Sbjct: 595  EMAFYSLPEFEEWKSSTP-NYKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPE 653

Query: 664  DGEAIELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELI 711
            D  AI LAFSKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELI
Sbjct: 654  DDAAISLAFSKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELI 713

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            LFS +D +RSIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL
Sbjct: 714  LFSNSDNERSIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSL 773

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
              TI+ +AQ+FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD 
Sbjct: 774  MMTIINLAQNFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDH 833

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
             L +L +D Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRL++GE 
Sbjct: 834  TLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLMDGEE 893

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FL 950
              PM P Y+ F GTIE+ A  +    Y ++G +  +N TT+ I ELPIR WTQ Y+E  L
Sbjct: 894  PLPMLPSYKNFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVL 949

Query: 951  ESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
            E ++   ++    I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M
Sbjct: 950  EPMLNGTEKTPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSM 1009

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVN 1067
             LFD  G +KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++
Sbjct: 1010 VLFDHVGCLKKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKID 1069

Query: 1068 GEIVVNNRKRTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVN 1121
            G+I++ N+ + +L+  L Q+G+   P         K  +      +D  +E+E++  V +
Sbjct: 1070 GKIIIENKPKKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTD 1129

Query: 1122 GVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL 1181
               +  ++YLL M +  LT EK   L   R++  +E+D L++ +P  LW +DL      +
Sbjct: 1130 SGPT--FNYLLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATF---I 1184

Query: 1182 DELDKSDARAEEE 1194
            +EL+  +A+ +++
Sbjct: 1185 EELEAVEAKEKQD 1197


>gi|324500590|gb|ADY40273.1| DNA topoisomerase 2 [Ascaris suum]
          Length = 1560

 Score = 1147 bits (2968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 646/1357 (47%), Positives = 872/1357 (64%), Gaps = 104/1357 (7%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQA-LWIYEEESKTMIHRTISYVPGLYKIFD 84
            +IE +YQKKSQLEHILLRPDTYIGS+E   +A +W+Y+ E + ++ R I+YVPGLYKIFD
Sbjct: 23   SIERIYQKKSQLEHILLRPDTYIGSVEYTERAPMWVYDAELERIVQRDITYVPGLYKIFD 82

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDPKM+ +KV ID+E+  I+V N+G G+PV +H+ E V+VPELIFG LL
Sbjct: 83   EILVNAADNKQRDPKMNVIKVTIDKENCEITVFNNGKGIPVVLHKTEKVFVPELIFGTLL 142

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD  +K TGGRNGYGAKL N+FST F IET+  +  K +KQ + NNM K+ EP I
Sbjct: 143  TSSNYDDTERKVTGGRNGYGAKLCNVFSTRFTIETSSKEYGKSFKQTWVNNMTKEREPEI 202

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
             K K G+++TKV+F+PDLAKF MT L+DD+VALM +R  D+AG   + VKV LN  ++PV
Sbjct: 203  GKSK-GEDFTKVTFRPDLAKFRMTELDDDIVALMSRRAFDIAGST-RGVKVFLNHKQLPV 260

Query: 265  KSFAEYVDMYPKSVTR--------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            + F +YV+ Y K             +E+VN+RWE+ +T+SE  FQQVSF N IAT KGG 
Sbjct: 261  QGFKQYVEQYVKYNVNAQGEPYGFIYEQVNDRWEVALTVSERGFQQVSFANSIATTKGGR 320

Query: 317  HVDYVANQVANHVMAVVNKK---NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            HVDY+ +QV   ++ ++ KK   +   NVK   V+NH+WVFVNALI+NP FDSQ+KET+T
Sbjct: 321  HVDYIVDQVTAKLIDIIKKKVGKSGGINVKPFQVRNHMWVFVNALIENPTFDSQSKETMT 380

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKL 432
            L+  SFGSKCELS++F++  T K GIVE +++W  FKQ + L KK    KT  ++G+ KL
Sbjct: 381  LQAKSFGSKCELSDKFIQS-TMKCGIVEAVMAWVRFKQQESLDKKCSSKKTSKLKGVPKL 439

Query: 433  EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
            EDAN AG +NS  CTLILTEGDSAK+LA++GL VVGRDR+GVFPLRGK+LNVRE +  Q+
Sbjct: 440  EDANDAGTKNSSHCTLILTEGDSAKSLAVSGLGVVGRDRYGVFPLRGKMLNVREGNHKQI 499

Query: 493  LNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
            + N EI  + KI+GL+  ++Y N   +K+LRYG +M+M DQ                   
Sbjct: 500  MENVEINALLKIIGLQYRLKYENDDDMKTLRYGKVMVMADQ------------------- 540

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYS 609
                     D DGSHIKGL+INFIH  WP+L++  +F+ EFITPIVKAT K  +  SF+S
Sbjct: 541  ---------DQDGSHIKGLVINFIHFNWPALIR-RNFVEEFITPIVKAT-KGKEEFSFFS 589

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            +P+Y  W+ +   N  S+ IKYYKGLGTSTSKE KEYF ++  H+  F +    D  +++
Sbjct: 590  LPEYAEWRNNTE-NWKSYRIKYYKGLGTSTSKEAKEYFTDMARHRIRFRYGGQDDDMSLD 648

Query: 670  LAFSKKKIEARKKWLLQF--EPGNHLDQ--KEKY--------IKYSDFVNKELILFSMAD 717
            +AFSKK+IE RK WL  +  E  N  +Q   E+Y        + + DFVNKEL+LFS  D
Sbjct: 649  MAFSKKRIEDRKTWLTSWMAERKNRREQGLTEEYLYDKDTHTVSFKDFVNKELVLFSNLD 708

Query: 718  LQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
             +RSIPS+VDGLKPGQRK+LF  FKR   KE KVAQ +G V E SAYHHGE SL +TI+ 
Sbjct: 709  NERSIPSLVDGLKPGQRKVLFTCFKRADKKEVKVAQLAGAVGEMSAYHHGEASLMATIIN 768

Query: 778  MAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLN 837
            +AQD+VGSNNINLL P GQFGTR QGGKD+AS RYIFT+L+P+T+ LFP  D+ +L +L 
Sbjct: 769  LAQDYVGSNNINLLLPIGQFGTRLQGGKDSASPRYIFTQLNPVTKALFPSVDESVLRFLY 828

Query: 838  EDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHP 897
            E+ Q+IEP WY PIIPTVLVNG+EGIGT WS+ +PNYNPR+IV N+R ++ GE    M P
Sbjct: 829  EENQRIEPEWYCPIIPTVLVNGAEGIGTAWSTKVPNYNPREIVENIRLMIRGEQPRHMVP 888

Query: 898  WYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQ 956
            W++ F GTIE+         +  +G I  + E T+ I ELPIR WTQ Y+E  LE ++D 
Sbjct: 889  WFKNFRGTIEQMDENR----FVCSGEIAIIGEGTIEITELPIRTWTQTYKESVLEPMLDG 944

Query: 957  ND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
            +D   + I  F++Y  DTTV F V ++ E +   + EGL K FKL T I+T++M LFD+ 
Sbjct: 945  SDKQPAMITDFKEYHTDTTVKFLVKMTPEKLRAAQMEGLHKVFKLQTVINTTSMVLFDAM 1004

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G +++++T E+I  +FF  R + Y +RK  Q+  L  +  +L N+ RFIL  + GEI++ 
Sbjct: 1005 GCLRRFNTVEEICTDFFETRKKKYIERKAFQMGMLRAQSQRLSNQARFILAKIKGEILIE 1064

Query: 1074 NRKRTDLLLELRQKGFTPFP-------KNSKSIEA---VVAGATDETEESEENPEVVNGV 1123
            N+++  ++ +L + GF P P       +  K +EA   V+    +E E   E  E  +  
Sbjct: 1065 NKRKLVIVEQLVKMGFDPDPVKKWKEAQKRKELEATGEVIPDEDEENESENEENEEASTP 1124

Query: 1124 QS-------IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDA 1176
            Q         DYDYL+ MAI  L+ E+   LL + +   EE+  L + +   LW  DLD 
Sbjct: 1125 QGKDLERKLSDYDYLVGMAIMKLSTEEKDKLLRESEAKMEELKALEEMSWAELWTSDLDH 1184

Query: 1177 LDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKND-KKSNNARATEAM 1235
                L ELDK +A         K   + D   K  AK+  K+A     KK N   A E +
Sbjct: 1185 F---LVELDKQEA---------KEKADLDVQIKNAAKKLAKDAVGGGRKKGNTILAKEVL 1232

Query: 1236 GEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQS 1295
             + + +   V PK  +  +K  A+K    E         + AK   +    +      + 
Sbjct: 1233 PDPNGIR--VAPKIDSMREKYEAKKGTSGEPKVRKPRALKEAKQKNEGGDVRTFFKKTED 1290

Query: 1296 GVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSED 1332
            G  + ++ + PA+K   +K+ A  KKV     SD++D
Sbjct: 1291 GSGQGDQAKEPARKPGATKKVA--KKVGWYSQSDTDD 1325


>gi|383858079|ref|XP_003704530.1| PREDICTED: DNA topoisomerase 2-like [Megachile rotundata]
          Length = 1497

 Score = 1147 bits (2966), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/1196 (50%), Positives = 799/1196 (66%), Gaps = 83/1196 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIE +YQKKSQLEHILLRPDTYIGS+E   + +W++++E + MI + I YVPGLYKIFD
Sbjct: 17   KTIERIYQKKSQLEHILLRPDTYIGSVEPVCELMWVFDKEKECMIQKEIKYVPGLYKIFD 76

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDPKMD +K+ ID  +++ISV N+G G+PV +H+EE +YVP +IFGHLL
Sbjct: 77   EILVNAADNKQRDPKMDTIKIEIDSTNNIISVWNNGKGIPVVVHKEENMYVPTMIFGHLL 136

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD  +K TGGRNGYGAKL NIFS  F IETA  +  K  KQ ++NNMG  SEP I
Sbjct: 137  TSSNYDDEEEKVTGGRNGYGAKLCNIFSHRFTIETASKEYRKCLKQTWSNNMGSASEPRI 196

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
             K   G+++TKV F PDL+KF M  L++D+++LM +R  D+A    + VKV LNG R+PV
Sbjct: 197  -KDFSGEDFTKVIFSPDLSKFKMECLDEDIISLMSRRAYDVAAST-RGVKVYLNGTRIPV 254

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            KSF +Y+D Y K         +   +E    RWEI VT+S+  FQQ+SFVN IAT KGG 
Sbjct: 255  KSFKDYIDFYIKGKEDDAGNPLKIAYENCGPRWEIAVTISDKGFQQMSFVNSIATTKGGR 314

Query: 317  HVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVD+V   +   +   + KKNK    +K   +KNHLW+FVN LI+NP FDSQTKE +TL+
Sbjct: 315  HVDHVTELIVKQLTETLKKKNKGGLTIKPFQIKNHLWIFVNCLINNPTFDSQTKENMTLQ 374

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK-NDGTKTEDVRGISKLED 434
              SFGSKC LS++F+  VT K+GIVE +LSWA FK    L+K    +K   ++GI KLED
Sbjct: 375  AKSFGSKCTLSDKFITAVT-KTGIVEAVLSWAKFKADSQLQKLGPKSKQRKLQGIPKLED 433

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG   S  CTLILTEGDSAK +A++GL+ +GRD+FG+FPLRGK+LNVREA+  Q+L 
Sbjct: 434  ANDAGTGKSLDCTLILTEGDSAKTMAVSGLASIGRDKFGIFPLRGKILNVREATHKQILE 493

Query: 495  NSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N EI N+ KILGL+   +Y    ++K+LRYG LMIMTDQ                     
Sbjct: 494  NPEINNLIKILGLQYKKKYETREDLKTLRYGKLMIMTDQ--------------------- 532

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK+ +F+ EFITPIVKAT K  +VLSF+S+P
Sbjct: 533  -------DQDGSHIKGLLINFIHHNWPSLLKL-NFVEEFITPIVKAT-KGNQVLSFFSVP 583

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            ++  WK S   N  ++ IKYYKGLGTST+KE KEYF+N+  H+  F ++ +QD + I +A
Sbjct: 584  EFTKWK-SETDNYHTYKIKYYKGLGTSTAKEAKEYFENMARHRIRFRYDGEQDDQNIIMA 642

Query: 672  FSKKKIEARKKWLLQFEPGNHLDQK---------EKY--------IKYSDFVNKELILFS 714
            FS+K ++ RK WL+     NH+D+          E+Y        + +SDF+N EL+L+S
Sbjct: 643  FSRKCVDQRKDWLM-----NHMDETKRRKEIGLGERYLYEKDTRTVTFSDFINVELVLYS 697

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
              D  RSIP+M+DG KPGQRK+++   KRN  +E KVAQ +G V+EHSAYHHGE SL ST
Sbjct: 698  NYDNVRSIPNMIDGFKPGQRKVVYTCLKRNDKREVKVAQLAGSVAEHSAYHHGETSLMST 757

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +AQ+FVGSNNINLLQ  GQFGTR  GGKDAAS RYIFT LSP+ RF+F K DD LL 
Sbjct: 758  IINLAQNFVGSNNINLLQSIGQFGTRLAGGKDAASPRYIFTMLSPLARFIFHKHDDPLLK 817

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            +  +D Q+IEP +Y+P IP VLVNG++GIGTGW + IPNYNPR+I+ N+ R+++    +P
Sbjct: 818  HEYDDNQKIEPVYYVPTIPMVLVNGADGIGTGWMTKIPNYNPREIIENLFRMMDDGEPKP 877

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESI 953
            M P+Y+ F GTIE          Y ++G I  +    + I ELP+  WTQ Y+E  LE +
Sbjct: 878  MIPYYKNFKGTIESCGE----YRYVISGEISVIGPDKVEITELPVGTWTQVYKETVLEPM 933

Query: 954  I---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
            +   D+  + I  +++Y+ DT+V F V L+ + ++  +++GL K FKL TT++ ++M  F
Sbjct: 934  LHGTDKTPAVINDYKEYNTDTSVHFIVILNRDKLVELERDGLHKAFKLQTTMTVTSMCAF 993

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    ++KYD+  QIL  FF +RLE Y KRK      L+ E  KL N+ RF+L   +G +
Sbjct: 994  DENQCLQKYDSALQILRCFFKVRLEMYHKRKAYLEGILQAEASKLSNQARFVLEKCDGSL 1053

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEESEENPEVVNGVQSI 1126
            V+ N+K+ D++ EL  +G+   P    K S++ E V+    D  E+       V  +   
Sbjct: 1054 VIENKKKKDMIAELVARGYESDPVVAWKLSQNREEVLDEVADNVEDEAALSTAV--IAQE 1111

Query: 1127 DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
            +YDYLL M + +LT E+   LL  RD+   E+  L+  +P SLW +DLD L  +L+
Sbjct: 1112 NYDYLLGMTLWSLTKERKDELLRQRDEKLAELKRLQARSPVSLWKEDLDNLLSELN 1167


>gi|51467892|ref|NP_001003834.1| DNA topoisomerase 2-alpha [Danio rerio]
 gi|49619131|gb|AAT68150.1| topoisomerase 2 [Danio rerio]
          Length = 1574

 Score = 1147 bits (2966), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 610/1200 (50%), Positives = 801/1200 (66%), Gaps = 75/1200 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++E++  M  R I++VPGLYKIFDE
Sbjct: 28   SVERIYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDEDT-GMNCRDITFVPGLYKIFDE 86

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M+ +KV ID E++ ISV N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 87   ILVNAADNKQRDKTMNCIKVNIDPENNTISVWNNGKGIPVVEHKVEKVYVPALIFGQLLT 146

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFS +F +ETA  +  + +KQ + +NM +  E  I 
Sbjct: 147  SSNYDDDEKKVTGGRNGYGAKLCNIFSLKFTVETACRESKRCFKQTWFDNMERAGESKI- 205

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  +GD++T ++F+PDLAKF M  L+ D VAL+ +R  D+AG   K V+V LNG R+P+ 
Sbjct: 206  KPFDGDDYTCITFQPDLAKFKMQALDKDTVALLTRRAYDIAGST-KGVRVLLNGKRLPIN 264

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            +F  YVD+Y K         +T  HE VNERWE+C+TLSE  FQQVSFVN I   KGG H
Sbjct: 265  NFRTYVDLYVKDKVDETGSPLTVVHEMVNERWEVCLTLSEKGFQQVSFVNSIDKNKGGRH 324

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
             DYVA+Q+ + ++ VV KKNK    VK   VKNH+W+FVN LI+NP+FDSQTKE +TL+Q
Sbjct: 325  TDYVADQIVSKLIEVVKKKNKAGVAVKPFQVKNHMWLFVNCLIENPSFDSQTKENMTLQQ 384

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             +FGS C LS++F+K+     GIVE++++W  FK    L KK    K   ++G+ KL+DA
Sbjct: 385  KNFGSACSLSDKFVKQANG-CGIVESIMNWVKFKAQAQLNKKCSAVKHTKIKGVPKLDDA 443

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGG+NS  CTLILTEGDSAK LA++GL VVGRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 444  NDAGGKNSNSCTLILTEGDSAKTLAVSGLGVVGRDRYGVFPLRGKMLNVREASHKQIMEN 503

Query: 496  SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KILGL+    Y++   +KSLRYG LMIMTDQ                      
Sbjct: 504  AEINNIIKILGLQYKKNYSDPESLKSLRYGKLMIMTDQ---------------------- 541

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+  +FL EFITPI+KA+NK  ++ SFYS+P+
Sbjct: 542  ------DQDGSHIKGLLINFIHHNWPSLLR-HNFLEEFITPIIKASNKKQEI-SFYSIPE 593

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +  WKE    +  SW IKYYKGLGTSTSKE KEYF ++T H+  F +    D EAI LAF
Sbjct: 594  FTEWKEK-QSSIKSWKIKYYKGLGTSTSKEAKEYFSDMTRHRIPFKYSGPADDEAITLAF 652

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK IE RK+WL  F            P  +L  Q+ K + Y DF+NKEL+LFS +D +R
Sbjct: 653  SKKMIEERKEWLTSFMINRRQRREHNLPEEYLYGQETKSLSYHDFINKELVLFSNSDNER 712

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIP MVDGLKPGQRK++FC FKRN  +E KVAQ +G V+E SAYHHGE SL  TI+G+AQ
Sbjct: 713  SIPCMVDGLKPGQRKVVFCCFKRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQ 772

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD LL Y  +D 
Sbjct: 773  NFVGSNNLNLLQPLGQFGTRLHGGKDSASPRYIFTMLSTLARLLFPVVDDNLLKYNYDDY 832

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPM--HPW 898
             ++EP WYMPIIP VL NG EGIGTGW+S IP Y+ R+I+ N+ R++NGE   PM   P 
Sbjct: 833  LRVEPEWYMPIIPLVLANGGEGIGTGWASRIPKYDVREIINNIHRMINGEEPLPMVNLPS 892

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQ--DYRE-FLESIID 955
            Y+GF GTI++ A  +    Y   G +  ++ TT+ I ELP++ WT    Y+E  LE +++
Sbjct: 893  YKGFKGTIDELAKNQ----YVNNGEVAIIDSTTIEITELPVKTWTPGLTYKENVLEVMLN 948

Query: 956  QND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDS 1012
              +   + I  +++Y  DTTV F V ++EE +   +  GL K FKL   ++ ++M LFD 
Sbjct: 949  GTEKVPALITDYKEYHTDTTVRFVVKMTEERLREAEAAGLHKVFKLQNLLTCNSMVLFDH 1008

Query: 1013 KGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVV 1072
             G +KKY++ + IL+EFF +R+++Y  RK   +  L  E  KL N+ RFIL  + G +V+
Sbjct: 1009 VGSLKKYESVQDILKEFFELRMKYYVLRKDWLVGMLGAESAKLSNQARFILEKIQGTLVI 1068

Query: 1073 NNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLL 1132
             N+ + +L+  L+Q G+   P  +           D  ++ E+  E  +G    DY+YLL
Sbjct: 1069 ENKPKKELIRMLQQMGYDSDPVKAWKDAQEKEEEEDAEDDDEKEKEDTSGP---DYNYLL 1125

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1192
            SM +  LT EK   L   RD    E++ L+   P  LW +DL A   +L+ +++ +  A+
Sbjct: 1126 SMPMWYLTKEKKDELCKQRDAKMTELNTLKMKAPADLWKEDLAAFTEELERVEQKEKEAQ 1185


>gi|324500583|gb|ADY40270.1| DNA topoisomerase 2 [Ascaris suum]
          Length = 1514

 Score = 1146 bits (2965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 680/1512 (44%), Positives = 925/1512 (61%), Gaps = 143/1512 (9%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQA-LWIYEEESKTMIHRTISYVPGLYKIFD 84
            +IE +YQKKSQLEHILLRPDTYIGS+E   +A +W+Y+ E + ++ R I+YVPGLYKIFD
Sbjct: 23   SIERIYQKKSQLEHILLRPDTYIGSVEYTERAPMWVYDAELERIVQRDITYVPGLYKIFD 82

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDPKM+ +KV ID+E+  I+V N+G G+PV +H+ E V+VPELIFG LL
Sbjct: 83   EILVNAADNKQRDPKMNVIKVTIDKENCEITVFNNGKGIPVVLHKTEKVFVPELIFGTLL 142

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD  +K TGGRNGYGAKL N+FST F IET+  +  K +KQ + NNM K+ EP I
Sbjct: 143  TSSNYDDTERKVTGGRNGYGAKLCNVFSTRFTIETSSKEYGKSFKQTWVNNMTKEREPEI 202

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
             K K G+++TKV+F+PDLAKF MT L+DD+VALM +R  D+AG   + VKV LN  ++PV
Sbjct: 203  GKSK-GEDFTKVTFRPDLAKFRMTELDDDIVALMSRRAFDIAGST-RGVKVFLNHKQLPV 260

Query: 265  KSFAEYVDMYPKSVTR--------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            + F +YV+ Y K             +E+VN RWE+ +T+SE  FQQVSF N IAT KGG 
Sbjct: 261  QGFKQYVEQYVKYNVNAQGEPYGFIYEQVNNRWEVALTVSERGFQQVSFANSIATTKGGR 320

Query: 317  HVDYVANQVANHVMAVVNKK---NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            HVDY+ +QV   ++ ++ KK   +   NVK   V+NH+WVFVNALI+NP FDSQ+KET+T
Sbjct: 321  HVDYIVDQVTAKLIDIIKKKVGKSGGINVKPFQVRNHMWVFVNALIENPTFDSQSKETMT 380

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKL 432
            L+  SFGSKCELS++F++  T K GIVE +++W  FKQ + L KK    KT  ++G+ KL
Sbjct: 381  LQAKSFGSKCELSDKFIQS-TMKCGIVEAVMAWVRFKQQESLDKKCSSKKTSKLKGVPKL 439

Query: 433  EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
            EDAN AG +NS  CTLILTEGDSAK+LA++GL VVGRDR+GVFPLRGK+LNVRE +  Q+
Sbjct: 440  EDANDAGTKNSSHCTLILTEGDSAKSLAVSGLGVVGRDRYGVFPLRGKMLNVREGNHKQI 499

Query: 493  LNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
            + N EI  + KI+GL+  ++Y N   +K+LRYG +M+M DQ                   
Sbjct: 500  MENVEINALLKIIGLQYRLKYENDDDMKTLRYGKVMVMADQ------------------- 540

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYS 609
                     D DGSHIKGL+INFIH  WP+L++  +F+ EFITPIVKAT K  +  SF+S
Sbjct: 541  ---------DQDGSHIKGLVINFIHFNWPALIR-RNFVEEFITPIVKAT-KGKEEFSFFS 589

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            +P+Y  W+ +   N  S+ IKYYKGLGTSTSKE KEYF ++  H+  F +    D  +++
Sbjct: 590  LPEYAEWRNNTE-NWKSYRIKYYKGLGTSTSKEAKEYFTDMARHRIRFRYGGQDDDMSLD 648

Query: 670  LAFSKKKIEARKKWLLQF--EPGNHLDQ--KEKY--------IKYSDFVNKELILFSMAD 717
            +AFSKK+IE RK WL  +  E  N  +Q   E+Y        + + DFVNKEL+LFS  D
Sbjct: 649  MAFSKKRIEDRKTWLTSWMAERKNRREQGLTEEYLYDKDTHTVSFKDFVNKELVLFSNLD 708

Query: 718  LQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
             +RSIPS+VDGLKPGQRK+LF  FKR   KE KVAQ +G V E SAYHHGE SL +TI+ 
Sbjct: 709  NERSIPSLVDGLKPGQRKVLFTCFKRADKKEVKVAQLAGAVGEMSAYHHGEASLMATIIN 768

Query: 778  MAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLN 837
            +AQD+VGSNNINLL P GQFGTR QGGKD+AS RYIFT+L+P+T+ LFP  D+ +L +L 
Sbjct: 769  LAQDYVGSNNINLLLPIGQFGTRLQGGKDSASPRYIFTQLNPVTKALFPSVDESVLRFLY 828

Query: 838  EDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHP 897
            E+ Q+IEP WY PIIPTVLVNG+EGIGT WS+ +PNYNPR+IV N+R ++ GE    M P
Sbjct: 829  EENQRIEPEWYCPIIPTVLVNGAEGIGTAWSTKVPNYNPREIVENIRLMIRGEQPRHMVP 888

Query: 898  WYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQ 956
            W++ F GTIE+         +  +G I  + E T+ I ELPIR WTQ Y+E  LE ++D 
Sbjct: 889  WFKNFRGTIEQMDENR----FVCSGEIAIIGEGTIEITELPIRTWTQTYKESVLEPMLDG 944

Query: 957  ND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
            +D   + I  F++Y  DTTV F V ++ E +   + EGL K FKL T I+T++M LFD+ 
Sbjct: 945  SDKQPAMITDFKEYHTDTTVKFLVKMTPEKLRAAQMEGLHKVFKLQTVINTTSMVLFDAM 1004

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G +++++T E+I  +FF  R + Y +RK  Q+  L  +  +L N+ RFIL  + GEI++ 
Sbjct: 1005 GCLRRFNTVEEICTDFFETRKKKYIERKAFQMGMLRAQSQRLSNQARFILAKIKGEILIE 1064

Query: 1074 NRKRTDLLLELRQKGFTPFP-------KNSKSIEA---VVAGATDETEESEENPEVVNGV 1123
            N+++  ++ +L + GF P P       +  K +EA   V+    +E E   E  E  +  
Sbjct: 1065 NKRKLVIVEQLVKMGFDPDPVKKWKEAQKRKELEATGEVIPDEDEENESENEENEEASTP 1124

Query: 1124 QS-------IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDA 1176
            Q         DYDYL+ MAI  L+ E+   LL + +   EE+  L + +   LW  DLD 
Sbjct: 1125 QGKDLERKLSDYDYLVGMAIMKLSTEEKDKLLRESEAKMEELKALEEMSWAELWTSDLDH 1184

Query: 1177 LDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKND-KKSNNARATEAM 1235
                L ELDK +A         K   + D   K  AK+  K+A     KK N   A E +
Sbjct: 1185 F---LVELDKQEA---------KEKADLDVQIKNAAKKLAKDAVGGGRKKGNTILAKEVL 1232

Query: 1236 GEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQS 1295
             + + +   V PK  +  +K  A+K    E         + AK   +    +      + 
Sbjct: 1233 PDPNGIR--VAPKIDSMREKYEAKKGTSGEPKVRKPRALKEAKQKNEGGDVRTFFKKTED 1290

Query: 1296 GVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFE--------IAAP 1347
            G  + ++ + PA+K   +K+ A  KKV     SD++D  + +  E  +        I AP
Sbjct: 1291 GSGQGDQAKEPARKPGATKKVA--KKVGWYSQSDTDDYSVEEISEDDDDDDDVHEVIPAP 1348

Query: 1348 EEGKKGGRKAAGNSKAAKPAAET---KKRG----------PAKKQ----QPEASL----- 1385
            ++     R  A N    K  AE    K+R           P KKQ     P+ ++     
Sbjct: 1349 KK-----RNIADNRGEVKEDAEIVPPKRRSIEETDSNAIKPVKKQTKPLSPQVTVDDFFD 1403

Query: 1386 -GQRLLTEMLKPAESSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSPSTSEEVAEV 1444
             G     E + PA+  P  K R+ +A      +  M        E  G  P+ S++    
Sbjct: 1404 KGADSDDEDIAPAKKKPVSKPREKKAQKRASPTAFMNDFFAENVETHGDGPAPSKKPT-- 1461

Query: 1445 LPPKARPQRANR 1456
              PKAR ++  +
Sbjct: 1462 -APKARVKKTQK 1472


>gi|170592146|ref|XP_001900830.1| Probable DNA topoisomerase II [Brugia malayi]
 gi|158591697|gb|EDP30301.1| Probable DNA topoisomerase II, putative [Brugia malayi]
          Length = 1570

 Score = 1146 bits (2965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1213 (51%), Positives = 821/1213 (67%), Gaps = 89/1213 (7%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQA-LWIYEEESKTMIHRTISYVPGLYKIFD 84
            +IE++YQKKSQLEHILLRPDTYIGS+E+  +A LW+Y+ E++ +I R ISYVPGLYKIFD
Sbjct: 76   SIEKIYQKKSQLEHILLRPDTYIGSVERTDKAPLWVYDMETERIIQRDISYVPGLYKIFD 135

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRD KM+ +K+ I++E + ISV N+G G+PV +H+ E +YVPELIFG LL
Sbjct: 136  EILVNAADNKQRDSKMNLIKININKETNEISVFNNGKGIPVVLHKVEQLYVPELIFGTLL 195

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ +K TGGRNGYGAKL NIFS EF +ET+  +  K +KQ + NNM K  +P +
Sbjct: 196  TSSNYDDSERKVTGGRNGYGAKLCNIFSREFTVETSSKEYGKAFKQTWKNNMTKDKDPFV 255

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            SK   G+++T+V+FKPDLAKF MT L+DD+++L+ +R  D+AG   K VKV LNG  +PV
Sbjct: 256  SKS-SGEDFTRVTFKPDLAKFRMTELDDDIISLISRRAYDVAGST-KGVKVYLNGKLLPV 313

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            + F +YVD Y K             +E+VNERWE+ +T+SE  FQQVSFVN IAT KGG 
Sbjct: 314  QGFKQYVDQYAKHNLDNDGEPYKVVYEQVNERWEVALTVSEKGFQQVSFVNSIATTKGGR 373

Query: 317  HVDYVANQVANHVMAVVNKK--NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            HVDYVA+Q+   ++  + KK      NVK   +K+H+W+FVN+L++NP FDSQTKET+TL
Sbjct: 374  HVDYVADQITAKLIDTIKKKVGKSGVNVKPFQIKSHMWIFVNSLVENPTFDSQTKETMTL 433

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLE 433
            +  SFGSKCELSE F+  V  K GIVE +L+W  FKQ + L KK    KT  ++GI KLE
Sbjct: 434  QAKSFGSKCELSERFINAVM-KCGIVEAVLAWVRFKQQETLDKKCSSKKTSKLKGIPKLE 492

Query: 434  DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            DAN AG +NS  CTLILTEGDSAK+LA++GL VVGRDR+GVFPLRGK+LNVRE S  Q++
Sbjct: 493  DANDAGTKNSSLCTLILTEGDSAKSLAVSGLGVVGRDRYGVFPLRGKMLNVREGSHKQIM 552

Query: 494  NNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
             N+EI ++ KI+GL+  ++Y+   ++++LRYG +M+M DQ                    
Sbjct: 553  ENAEINSLIKIIGLQYRLKYDKDEDMRTLRYGKIMVMADQ-------------------- 592

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                    D DGSHIKGL+INFIH  WP L++  +F+ EFITPIVKAT K  + LSF+S+
Sbjct: 593  --------DQDGSHIKGLVINFIHYNWPVLIR-RNFVEEFITPIVKAT-KGKESLSFFSL 642

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+Y  W+ +   N  ++ IKYYKGLGTSTSKE KEYF ++  H+  F +  ++D  ++++
Sbjct: 643  PEYAEWRNNTE-NWKTYRIKYYKGLGTSTSKEAKEYFTDMIRHRIRFQYSGEEDDSSLDM 701

Query: 671  AFSKKKIEARKKWLLQF--------EPG---NHL-DQKEKYIKYSDFVNKELILFSMADL 718
            AFSKKKIE RK WL  +        E G    +L D+  + + + DFVNKEL+LFS AD 
Sbjct: 702  AFSKKKIEDRKVWLTNWMAEKKTRREQGLTEEYLYDKDTRAVSFKDFVNKELVLFSNADN 761

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
            +RSIPS+VDGLKPGQRK+LF  FKR   KE KVAQ +G V E SAYHHGE SL STI+ +
Sbjct: 762  ERSIPSLVDGLKPGQRKVLFTCFKRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVNL 821

Query: 779  AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
            AQD+VGSNNINLL P GQFGTR QGGKD+AS RYIFT+L+P+TR LFP  D+ +L +L E
Sbjct: 822  AQDYVGSNNINLLLPIGQFGTRLQGGKDSASPRYIFTQLNPVTRALFPAVDENVLRFLFE 881

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPW 898
            + Q+IEP WY PIIPTVLVNG+EGIGT WS+ IPNYNPR+IV N+RRL+ GE  +P+ PW
Sbjct: 882  ENQRIEPEWYCPIIPTVLVNGAEGIGTAWSTKIPNYNPREIVDNMRRLIRGEEPKPLIPW 941

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQN 957
            ++ F GTIEK         Y  +G I  + + T+ I ELPIR WTQ+Y+E  LES+++ +
Sbjct: 942  FKNFRGTIEKLDESR----YICSGEIALLGDDTIEITELPIRTWTQNYKESVLESMLEGS 997

Query: 958  DS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
            D     I+ F++Y  DTTV F V ++   +   K EGL K FKL T I+ S+M LFD  G
Sbjct: 998  DKQPPLIQDFKEYHTDTTVKFVVKMNPAKLREAKMEGLHKIFKLQTAINISSMVLFDPLG 1057

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             ++++   E+I +EFF IR + Y +RK  Q   L  +  +L N+ RFIL  + GEI++ N
Sbjct: 1058 CLRRFSNVEEICKEFFEIRKKKYIERKAFQEGMLRAQSERLSNQARFILEKIKGEILIEN 1117

Query: 1075 RKRTDLLLELRQKGFTPFP-------KNSKSIEAVVAGATDETEESEENPEVVNGVQS-- 1125
            +++  ++ +L +KGF P P       +  + +E       D+ E   E  E      S  
Sbjct: 1118 KRKAVIVEQLVKKGFDPDPVKKWKELQRKRELEMTGEXQVDDEEMEGEEEEESESSVSPM 1177

Query: 1126 --------IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
                     DYDYL+ MAI  L+ E+   LL D +   EE+  L   T   LW +DL+  
Sbjct: 1178 KKDLEKKLSDYDYLVGMAILKLSEEEKDKLLHDSELKLEELKALELKTWSDLWEEDLNNF 1237

Query: 1178 DMQLDELDKSDAR 1190
               L EL+K +A+
Sbjct: 1238 ---LVELEKQEAK 1247


>gi|18369822|dbj|BAB84106.1| DNA topoisomerase II [Talaromyces flavus var. flavus]
          Length = 1094

 Score = 1146 bits (2964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/1134 (51%), Positives = 781/1134 (68%), Gaps = 65/1134 (5%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK S  EHI+ RPDTYIGS E   Q +W+Y   ++ M  R ++YVPGLYKIFDEI+VNA
Sbjct: 4    YQKLSPREHIIKRPDTYIGSTEMTPQQMWVYSSATEGMEFREVTYVPGLYKIFDEIVVNA 63

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ D  MD ++V ID+E  +ISV N+G G+P+E+H +E +YVPELIFGHLLTSSNYD
Sbjct: 64   ADNKQNDKNMDEIRVTIDRESGVISVWNNGRGIPIEMHAKEKIYVPELIFGHLLTSSNYD 123

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  +K TGGRNGYGAKL N+FSTEFI+ET D  + K+YKQ +T+NM K  +  I++ K G
Sbjct: 124  DTQQKVTGGRNGYGAKLCNVFSTEFILETQDSHQKKRYKQTWTDNMTKVGKAKITEAK-G 182

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            +++TKV+FKPD AKF MT ++DD  AL+K+RV DLAG     V V+LNG R+P+++F +Y
Sbjct: 183  EDFTKVTFKPDYAKFGMTGIDDDFEALVKRRVYDLAGT--AKVAVKLNGSRIPIRNFKKY 240

Query: 271  VDMYPKSVTRFHERVNE---------------RWEICVTLSEGQFQQVSFVNGIATIKGG 315
            ++MY K++ R  ER ++               RWE+   +S+G FQQVSFVN IAT  GG
Sbjct: 241  MEMYTKAIRR--ERGDDGPAPKDEIITCSPDPRWEVGFAVSDGSFQQVSFVNSIATTSGG 298

Query: 316  THVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            THV+Y+A+Q+   +   + KKNKN A +K   ++NH+++FVNALI NPAF SQTKE LT 
Sbjct: 299  THVNYIADQICGRLATELKKKNKNGATLKPAQLRNHIFIFVNALIVNPAFTSQTKEQLTT 358

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED 434
            +Q+ FGSKC L ++F KK+  K+ ++  +LS+A  K  + LKK DG +   +    KL D
Sbjct: 359  KQTQFGSKCPLEDDFYKKI-LKTNVMSNILSFAAHKADQMLKKTDGGRRSRMNN-PKLTD 416

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG +    CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS  Q+  
Sbjct: 417  ANKAGTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASFEQISK 476

Query: 495  NSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
            N+EI NIK  +GL+   EY + + LRYGHLMIMTDQ                        
Sbjct: 477  NAEIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ------------------------ 512

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSM 610
                DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPIVK    + K      SF++M
Sbjct: 513  ----DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIVKVWKGDPKNPTRQHSFFTM 568

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+YEA++E+       W  KYYKGLGTST+++ + YF+++  H K+F    D +   IEL
Sbjct: 569  PEYEAFREA--HKNERWEHKYYKGLGTSTTEDAQVYFRDLDRHLKEFHTIQDNEAALIEL 626

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AFSKKK + RK+WL QF PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLK
Sbjct: 627  AFSKKKADERKEWLRQFRPGTYLDHTLSKITYTDFINKELILFSMADNIRSIPSVVDGLK 686

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+L+  F+RN  K+ KV + +G+VS  +AY HG+ SL  TI+G+AQ+FVGSNNIN 
Sbjct: 687  PGQRKVLYTCFRRNLKKDMKVVELAGHVSGMTAYQHGDASLQQTIVGLAQNFVGSNNINC 746

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+P+G FG+R QGG D ASARYI+TRLSP  R ++   DD LL Y  +DG++IEP  YMP
Sbjct: 747  LEPSGNFGSRLQGGSDCASARYIYTRLSPFARRVYHSHDDPLLTYNEDDGEKIEPEIYMP 806

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTA 910
            ++P +LVNG++GIGTGWSS IPNYNP DIV N+RR+++GE ++PM PW+RGF G +    
Sbjct: 807  VVPMILVNGTDGIGTGWSSSIPNYNPEDIVENLRRMMDGEEIKPMQPWFRGFNGEV---- 862

Query: 911  SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYS 968
            +   G  Y  +GII+E  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+
Sbjct: 863  TDMGGDRYKFSGIIKETGDKEVEITELPIRTWTQDFKDKLEDIIKAEKTPSFIKDYKDYN 922

Query: 969  DDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
                V F + + E+ M     EGL +KFKLT +I+TSN+  FD +G I KY   + IL+E
Sbjct: 923  THHKVHFVIQMDEKHMTAALSEGLEEKFKLTKSIATSNLVAFDPEGRITKYAGVDDILKE 982

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ IRL++YE+RK+ QL  ++ EL +L N+ RF+  +++G++VV+ +K++ L+ EL++K 
Sbjct: 983  FYTIRLKYYERRKQYQLSEMQRELDRLSNQARFVQMIIDGDLVVSKKKKSALVAELKEKN 1042

Query: 1089 FTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLE 1142
            F PFPK   +++A    A    E+ EE       V S  YDYLL MAI +LT E
Sbjct: 1043 FKPFPKVKDAVKA--GEAEPALEDEEEEGAEDTEVLSNSYDYLLGMAIWSLTHE 1094


>gi|449304612|gb|EMD00619.1| hypothetical protein BAUCODRAFT_144266 [Baudoinia compniacensis UAMH
            10762]
          Length = 1725

 Score = 1145 bits (2963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 605/1226 (49%), Positives = 815/1226 (66%), Gaps = 75/1226 (6%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E YQK +QLEHIL RPDTYIGS+E+ T+ +W+Y  E+  M +R ++YVPGLYKIFDEILV
Sbjct: 135  EQYQKLTQLEHILKRPDTYIGSVERTTEQMWVYNSETDQMENRKVTYVPGLYKIFDEILV 194

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNKQRD  M+ ++V++++E  +ISV N+G G+PVEIH  EG+Y+PE+IFGHLLTSSN
Sbjct: 195  NAADNKQRDKNMNEMRVLVNREMGVISVQNNGRGIPVEIHATEGIYIPEMIFGHLLTSSN 254

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD   K TGGRNGYGAKLTNI+ST+F +ET D K  +KYKQ +  NM +     I  CK
Sbjct: 255  YDDEEAKVTGGRNGYGAKLTNIYSTQFQLETVDSKTKQKYKQTWKKNMSEIGTAKIEPCK 314

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPVKSF 267
            E D++TK++F PD  KF M  ++DD  AL+K+RV D+AG C G  VKV LN  R+ +  F
Sbjct: 315  E-DDYTKITFMPDFRKFGMDKMDDDFEALVKRRVYDMAGTCTG--VKVFLNDKRIKISKF 371

Query: 268  AEYVDMYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKG 314
             +Y++MY K++                 +  +ERWEI   +S+G FQQVSFVN IAT  G
Sbjct: 372  KQYMEMYTKAIKSENLANGTESEQVILTDNPHERWEIGFAVSDGSFQQVSFVNSIATTSG 431

Query: 315  GTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            GTHV+Y+A+Q+ + +  +VNKKNK    +K   ++NH+++FVNALI NPAF SQTKE LT
Sbjct: 432  GTHVNYIADQICDKLEEIVNKKNKGGVKLKKAQIRNHIFLFVNALIVNPAFTSQTKEQLT 491

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLE 433
             + S+FGSK ++SE+FLK + AK+  V  +L +A  K  K L K+DG + + +   SKL 
Sbjct: 492  TKPSAFGSKPQVSEKFLKDI-AKTEAVTNILHFAQQKADKVLAKSDGNRRQRMNN-SKLT 549

Query: 434  DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            DAN AG ++  +CTLILTEGDSA  LA+AG +VVG DRFGVFPLRGKLLNVR+AS +Q+ 
Sbjct: 550  DANDAGTKDGYKCTLILTEGDSASLLALAGRAVVGPDRFGVFPLRGKLLNVRDASIDQIS 609

Query: 494  NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
             N EI NIKK +GL+   EY + KSLRYGHLMIMTDQ                       
Sbjct: 610  KNQEIQNIKKFMGLQHKKEYTDTKSLRYGHLMIMTDQ----------------------- 646

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---ATNKNGKV-LSFYS 609
                 DHDGSHIKGLLINF+   +PSLLKIP FL+EFITPIVK      KN K    F++
Sbjct: 647  -----DHDGSHIKGLLINFLQVQFPSLLKIPGFLLEFITPIVKVWRGDPKNPKAKRDFFT 701

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MP+YEAWKE   GN   W  KYYKGLGTS +K+ + YF ++  H K F    D + E +E
Sbjct: 702  MPEYEAWKEQ-PGNERGWDHKYYKGLGTSDTKDAQIYFADLDKHLKRFHKIQDGEPELLE 760

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQK-EKYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
            LAFSKKK +ARK+WL +F PG +LD      I Y  F+NKELILFSMAD  RSIPS++DG
Sbjct: 761  LAFSKKKADARKQWLQEFVPGTYLDMSGTDDITYDSFINKELILFSMADNVRSIPSVIDG 820

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
             KPGQRK+L+  F+RN  K+ KV + +G VS  +AY +GE S+  TI+G+AQ+FVGSNN+
Sbjct: 821  FKPGQRKVLYTCFRRNLKKDVKVVELAGSVSGLTAYAYGEASMQGTIVGLAQNFVGSNNM 880

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            N L+P+G FG+R QGG+DAASARYI+TRLSP  R +F   D+ LL Y  +DG+ IEP  Y
Sbjct: 881  NCLEPSGNFGSRLQGGQDAASARYIYTRLSPFARKVFHTTDEALLTYNTDDGKTIEPECY 940

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG---EMMEPMHPWYRGFGGT 905
            +PI+P +L+NG++GIGTGWS+ IPNYNP D++AN++R + G   + M+ M PW+RG+ G 
Sbjct: 941  LPIVPMILINGADGIGTGWSTSIPNYNPEDVIANLKRRMEGDGKDAMQAMTPWFRGWTGP 1000

Query: 906  IEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRG 963
            +E+T   +    +   G+I    + T+ + ELP+R WTQD+++ LE II  +++ SFI+ 
Sbjct: 1001 VEQTRDDQ----FKFNGVITVTGDNTVEVTELPVRVWTQDFKDKLEDIIKAEKSPSFIKD 1056

Query: 964  FRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPE 1023
            + +Y+    V F + + E+S M++ +  L   FKL+  ++TSN+  FD+ G I KY TP 
Sbjct: 1057 YVEYNTPERVHFIIKMEEKS-MQSDEGKLADFFKLSKPMATSNLVAFDAHGRIHKYATPL 1115

Query: 1024 QILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLE 1083
             I+EEF+ +RL+ Y+KRK+  L  ++ EL KL N+ RF+  +++G++VV+ +K+  L+ E
Sbjct: 1116 DIMEEFYQVRLQMYQKRKQHMLAEMQRELEKLSNQARFVKMIIDGKLVVSKKKKAVLVAE 1175

Query: 1084 LRQKGFTPFP-----KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGT 1138
            L++ GFT FP     K     EAV+   T E EES  + +      + DYDYLL MAI +
Sbjct: 1176 LQKLGFTRFPKVVDAKKEGEFEAVIEPGT-EGEESNAD-DADTAAGASDYDYLLGMAIWS 1233

Query: 1139 LTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKI 1198
            LT E+V+ LL        E+D L K + + LW  DLDAL   L+E  K      +   K+
Sbjct: 1234 LTQERVEKLLKQIGDKETEIDALTKKSAKDLWKTDLDAL---LEEWQKQLEEEAKREKKV 1290

Query: 1199 KGNG-NGDAGPKIVAKRAPKNARKND 1223
            +  G    A   I AK   K  + ND
Sbjct: 1291 RSKGRRASAKLGIGAKGGSKKRKAND 1316


>gi|198473349|ref|XP_001356262.2| GA10169 [Drosophila pseudoobscura pseudoobscura]
 gi|198139416|gb|EAL33325.2| GA10169 [Drosophila pseudoobscura pseudoobscura]
          Length = 1450

 Score = 1145 bits (2963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 593/1213 (48%), Positives = 809/1213 (66%), Gaps = 99/1213 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE+MYQKKSQLEHILLRPD+YIGS+E   + +W+Y+ E   MI R I++VPGLYKIFDE
Sbjct: 8    SIEQMYQKKSQLEHILLRPDSYIGSVEFTKELMWVYDFEKARMIQREIAFVPGLYKIFDE 67

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M+ +K+ ID E +++S+ N+G G+PV +H+E+ +YVP +IFGHLLT
Sbjct: 68   ILVNAADNKQRDKSMNTIKIDIDAEKNVVSIWNNGQGIPVTMHKEQKMYVPTMIFGHLLT 127

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKL NIFST F +ETA  +  K +KQ + +NM K S+  I 
Sbjct: 128  SSNYNDDEKKVTGGRNGYGAKLCNIFSTSFTVETATKQYKKNFKQTWGSNMSKASDVTI- 186

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G ++T+++F PDLAKF M  L++D+VALM +R  D+A    K V V LNG+++ VK
Sbjct: 187  KDFNGTDFTRITFSPDLAKFKMERLDEDIVALMSRRAFDVAAS-SKGVSVFLNGNKLTVK 245

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            +F +Y+D++ K+        +   HE  NERWE+    S+  FQQVSFVN IAT KGG H
Sbjct: 246  NFKDYIDLHVKNQDDDCGQPIKIVHEVANERWEVACCPSDRGFQQVSFVNSIATTKGGRH 305

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD+V + V   ++ V+ KKNK   N+K   V+NHLW+FVN LI+NP FDSQTKE +TL+ 
Sbjct: 306  VDHVVDNVIKQLIEVLKKKNKGGINIKPFQVRNHLWIFVNCLIENPTFDSQTKENMTLQA 365

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
              FGSKC LSE+F+  ++ KSGIVE++L+WA FK   D+ K  G K+  ++GI KLEDAN
Sbjct: 366  KGFGSKCTLSEKFISSLS-KSGIVESVLAWAKFKAQNDIAKTGGRKSSKIKGIPKLEDAN 424

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AGG+NS  CTLILTEGDSAK+LA++GL V+GR+ +GVFPLRGKLLNVREA+  Q+  N+
Sbjct: 425  EAGGKNSINCTLILTEGDSAKSLAVSGLGVIGRNYYGVFPLRGKLLNVREANFKQLSENA 484

Query: 497  EIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            EI N+ KI+GL+   +Y   +++K+LRYG +MIMTDQ                       
Sbjct: 485  EINNLCKIIGLQYKKKYLTEDDLKTLRYGKVMIMTDQ----------------------- 521

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
                 D DGSHIKGLLINF+H+ WP LL++P FL EFITPIVK T KN + LSFYS+P++
Sbjct: 522  -----DQDGSHIKGLLINFVHTNWPELLRLP-FLEEFITPIVKVTKKNEE-LSFYSLPEF 574

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
            E WK     N  ++++KYYKGLGTSTSKE KEYFQ++  H+  F ++   D + I +AFS
Sbjct: 575  EEWKMDTP-NHHTYNVKYYKGLGTSTSKEAKEYFQDMERHRILFKYDGQVDDDNIMMAFS 633

Query: 674  KKKIEARKKWLLQFEPGNHLDQKE-----------------KYIKYSDFVNKELILFSMA 716
            +K IE+RK WL      NH+D+ +                 K+I YSDF+N EL+LFS A
Sbjct: 634  RKHIESRKVWLT-----NHMDEVKRRREMGLPERYLYTKGTKHISYSDFINLELVLFSNA 688

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D +RSIPS+VDGLKPGQRK++F  FKRN  +E KVAQ SG V+E SAYHHGE SL  TI+
Sbjct: 689  DNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIV 748

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQ++VGSNNINLL+P GQFGTR  GGKD ASARYIFT +SP+TR ++   DD LL+Y 
Sbjct: 749  NLAQNYVGSNNINLLEPRGQFGTRLTGGKDCASARYIFTLMSPLTRLIYHPLDDPLLEYQ 808

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +DGQ+IEP WY+PIIP VLVNG+EGIGTGWS+ I NYNPR+I  N+RR++N E   PMH
Sbjct: 809  TDDGQRIEPLWYLPIIPMVLVNGAEGIGTGWSTKIANYNPREITRNLRRMINEEEPLPMH 868

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIID 955
            PWY+ F G +E  +       Y  TG I+ +    + I ELPI  WTQ+Y+E  LE++ +
Sbjct: 869  PWYKNFTGRMEYISDGR----YVHTGNIQILPGERVEITELPIGVWTQNYKENVLEALSN 924

Query: 956  QND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQE--GLLKKFKLTTTISTSNMHLF 1010
              +   + +  +R+Y  DTTV F +  +     R + E  G  + FKL++T+S + MH F
Sbjct: 925  GTEKVKAIVSEYREYHTDTTVRFVISFAPGEFRRIQSEDGGFYRVFKLSSTLSINQMHAF 984

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    +++Y +   +L+EF+ +R+E+Y +RK+  +  L     +L ++ RFIL      +
Sbjct: 985  DQNNCLRRYASSTDVLKEFYQLRVEYYGRRKEYLVGQLTALADRLSDQARFILEKCEKTL 1044

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP--------------------KNSKSIEAVVAGATDET 1110
            VV N++R  +  EL ++G+ P P                    ++ +  +A  + +  + 
Sbjct: 1045 VVENKQRKAMCDELTKRGYRPDPVKEWQRRIKMEDAEPENEEEEDEEGEQAAPSSSKKDV 1104

Query: 1111 EESEENPEVVNGVQSI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESL 1169
            ++  +  +    +  +  +DYLL M++  LT EK   LL  RD    E+D+LRK TP  L
Sbjct: 1105 KKEVDPDKAFKKLTDVKKFDYLLGMSMWMLTEEKKNELLKQRDYKLSELDNLRKRTPHQL 1164

Query: 1170 WVKDLDALDMQLD 1182
            W+ DLDAL+ +L+
Sbjct: 1165 WLDDLDALEQKLN 1177


>gi|340729154|ref|XP_003402873.1| PREDICTED: DNA topoisomerase 2-like [Bombus terrestris]
          Length = 1502

 Score = 1145 bits (2963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 597/1198 (49%), Positives = 800/1198 (66%), Gaps = 83/1198 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIE +YQKKSQLEHILLRPDTYIGS+E  T+ +WIY++E ++M+ + I YVPGLYKIFD
Sbjct: 17   KTIEGIYQKKSQLEHILLRPDTYIGSVEPMTEMMWIYDKEKESMVQKEIKYVPGLYKIFD 76

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDPKMD +K+ ID ++++ISV N+G G+PV IH+EE +YVP +IFGHLL
Sbjct: 77   EILVNAADNKQRDPKMDTIKIEIDPKNNVISVWNNGKGIPVVIHKEENMYVPTMIFGHLL 136

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD  +K TGGRNGYGAKL NIFS  F +ETA  +  K  KQ + NNMG  SEP I
Sbjct: 137  TSSNYDDEEEKVTGGRNGYGAKLCNIFSHRFTVETASKEYKKCLKQTWNNNMGSASEPRI 196

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
             K   G+++TKV F PDL+KF M  L+DD+VALM +R  D+A    + VKV LNG ++PV
Sbjct: 197  -KDFSGEDFTKVIFSPDLSKFKMQSLDDDIVALMSRRAYDIAAST-RGVKVYLNGTKIPV 254

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            K+F +YVD Y K         +   +E    RWE+ V LS+  +QQ+SFVN IAT KGG 
Sbjct: 255  KNFKDYVDFYIKGREDEGGNPLKVVYESCGARWEVAVALSDKGYQQMSFVNSIATTKGGR 314

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            H D+V + +   +   + +KNK    +K   +KNHLW+FVN LI+NP FDSQTKE +TL+
Sbjct: 315  HTDHVTDLIVKQLTETLKRKNKAGVAIKPFQIKNHLWIFVNCLINNPTFDSQTKENMTLQ 374

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK-NDGTKTEDVRGISKLED 434
              SFGSKC LSE+F+  VT K GIVE +L+WA FK    L+K    +K   ++GI KLED
Sbjct: 375  PKSFGSKCTLSEKFITAVT-KIGIVEAVLTWAKFKADSQLQKLGPKSKQRKLQGIPKLED 433

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG   S +CTLILTEGDSAK +A++GL+ +GRD++G+FPLRGK+LNVREA+  Q+L 
Sbjct: 434  ANDAGTNKSLECTLILTEGDSAKTMAVSGLAAIGRDKYGIFPLRGKILNVREATHKQILE 493

Query: 495  NSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI N+ KILGL+   +Y    ++K+LRYG +MIMTDQ                     
Sbjct: 494  NAEINNLIKILGLQYKKKYETREDLKTLRYGKMMIMTDQ--------------------- 532

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK+ +F+ EFITPIVKA+ K  ++LSF+SMP
Sbjct: 533  -------DQDGSHIKGLLINFIHHNWPSLLKL-NFVEEFITPIVKAS-KGNQILSFFSMP 583

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK S   N  ++ IKYYKGLGTST+KE KEYF+N+T H+  F ++ DQD + I +A
Sbjct: 584  EFQKWK-SETENFHTYKIKYYKGLGTSTAKEAKEYFENMTRHRIRFRYDGDQDDQNIIMA 642

Query: 672  FSKKKIEARKKWLLQFEPGNHLDQKEK-----------------YIKYSDFVNKELILFS 714
            FSKK ++ RK WL+     NH+D+ ++                  + +SDF+N EL+L+S
Sbjct: 643  FSKKCVDQRKDWLM-----NHMDETKRRKEIGLGERFLYEKDTRTVSFSDFINVELVLYS 697

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
              D  RSIP+M+DG KPGQRK+L+   KRN  +E KVAQ +G V+EHSAYHHGE SL ST
Sbjct: 698  NYDNVRSIPNMIDGFKPGQRKVLYTCLKRNDKREVKVAQLAGSVAEHSAYHHGEVSLMST 757

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LSP+ R++F K DD LL 
Sbjct: 758  IINLAQNFVGSNNINLLQPIGQFGTRLAGGKDAASPRYIFTMLSPLARYIFHKHDDPLLK 817

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            +  +D Q+IEP +Y+P IP VLVNG++GIGTGW + IPNYNPR+I+ N+ R+++G   +P
Sbjct: 818  HEYDDNQKIEPVFYVPTIPMVLVNGADGIGTGWMTKIPNYNPREIIENLYRMMDGADPKP 877

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESI 953
            M P+Y+ F G IE          Y + G I  +    + I ELP+  WTQ Y+E  LE +
Sbjct: 878  MVPYYKNFKGVIESCGD----YRYVINGEISVIAPDKVEITELPVGTWTQTYKETVLEPM 933

Query: 954  IDQND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
            +   +   + I  +++Y+ DT V F + ++ + ++  +++GL K FKL TT + ++M  F
Sbjct: 934  LHGTEKIPAMISDYKEYNTDTAVHFIIMINRDKLVELERDGLHKAFKLQTTTTVTSMCAF 993

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    ++KYD+  QIL+ F+ +RLE Y KRK+     L+ E  KL N+ RFIL   +G I
Sbjct: 994  DENLCLQKYDSVLQILKGFYKVRLETYHKRKEYLEGILQAEASKLSNQARFILEKCDGTI 1053

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEESEENPEVVNGVQSI 1126
            V+ N+KR D++ EL ++ +   P    K S++ E V+    +  +E         G +  
Sbjct: 1054 VIENKKRKDMIAELIRREYESDPVLAWKLSQNREEVLEEVAENVDEESATSSTAIGKE-- 1111

Query: 1127 DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL 1184
            ++DYLL M +  LT EK   LL  +D    E+  L+  TP SLW +DLD L  +L+ L
Sbjct: 1112 NFDYLLGMTLWCLTKEKKDELLRQKDDKLAELKRLQARTPISLWKEDLDNLLNELNRL 1169


>gi|156063624|ref|XP_001597734.1| hypothetical protein SS1G_01930 [Sclerotinia sclerotiorum 1980]
 gi|154697264|gb|EDN97002.1| hypothetical protein SS1G_01930 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1846

 Score = 1145 bits (2963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/1196 (49%), Positives = 798/1196 (66%), Gaps = 74/1196 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT  E YQK +QLEHI+ RPDTYIGS+EK  Q +W++  E+K M  R +++VPGLYKIFD
Sbjct: 150  KTSTEQYQKLTQLEHIIKRPDTYIGSVEKTEQTMWVFNSETKEMELRKVTFVPGLYKIFD 209

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EI+VNAADNKQ DP M  +KVV+D+E   ISV N G G+PVEIH++E +Y+PE+IFGHLL
Sbjct: 210  EIMVNAADNKQNDPNMKNLKVVVDREKGEISVENDGRGIPVEIHEKEKIYIPEMIFGHLL 269

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            T SNYDD+  KTTGGRNGYGAKL NIFSTEF +ET D    K+YKQ + +NM K  +  I
Sbjct: 270  TGSNYDDDEAKTTGGRNGYGAKLCNIFSTEFTLETQDSNSGKRYKQTWADNMSKMGKAKI 329

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            S  K  D +T+V+F PD  KF MT ++DD  A++K+RV D+AG + K VKV LNG ++ +
Sbjct: 330  SSSKNAD-FTRVTFTPDWKKFKMTGIDDDFEAMVKRRVYDMAGVV-KGVKVYLNGTQIKL 387

Query: 265  KSFAEYVDMYPKSVTRFHERVNE----------------RWEICVTLSEGQFQQVSFVNG 308
              F +Y++MY K++ +  ER +E                +WE+   +S+G FQQVSFVN 
Sbjct: 388  -DFKKYIEMYAKAINK--ERGSEDTSANTVIVEDSKGHPKWEVGFAVSDGSFQQVSFVNS 444

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKN-KNANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            IAT  GGTHV+Y+A+Q+ + ++ VV K+N K A +KA+ V+NH+++FVN LI NPAF SQ
Sbjct: 445  IATTSGGTHVNYIADQICDKLLEVVKKRNPKGALLKANQVRNHIFLFVNCLITNPAFTSQ 504

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
            TKE LT R+  FGSKC L+EEFLKK+  K+  VE +L++A  K   +L K+DG +   + 
Sbjct: 505  TKEQLTTRKPQFGSKCTLTEEFLKKI-GKTEAVENILNFAAKKADLELAKSDGNRRSRMN 563

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
               KL DANLAG +   +CTLILTEGDSAK LA+AG +V+  DR GVFPLRGKLLNVR+A
Sbjct: 564  N-PKLVDANLAGTKRGHECTLILTEGDSAKGLAVAGRAVLDPDRIGVFPLRGKLLNVRDA 622

Query: 488  SSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            S +Q+  N+EI NIK+ LGLK    Y +   LRYGHLMIM DQ                 
Sbjct: 623  SHDQIAKNAEIQNIKQFLGLKHKTVYKDTLGLRYGHLMIMADQ----------------- 665

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA-----TNKNG 602
                       DHDGSHIKGLLINF+   +PSLLK+P F  EFITPIVK       NK  
Sbjct: 666  -----------DHDGSHIKGLLINFLQVQYPSLLKLPEFFREFITPIVKVWKGPNPNKPT 714

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
             + SF+++P+YE WKE+   N   W  KYYKGLGTS +++ + YF N+ +H ++F     
Sbjct: 715  NLRSFFTIPEYEEWKEA-HANDKGWKHKYYKGLGTSKAEDAQIYFSNLDVHLREFEVIKP 773

Query: 663  QDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
            ++ E ++LAFSKKK ++RK WL  F PG +LD  +K + Y +F+NKELILFSMAD  RSI
Sbjct: 774  EEEEMLDLAFSKKKADSRKTWLGNFVPGTYLDHTDKMLTYDNFINKELILFSMADNLRSI 833

Query: 723  PSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDF 782
            PS++DGLKPGQRK+++  FKRN   + KV + +GYVS+ SAYHHGE S+  TI+G+AQ+F
Sbjct: 834  PSVIDGLKPGQRKVMYACFKRNLTNDMKVVELAGYVSQVSAYHHGEASMQMTIVGLAQNF 893

Query: 783  VGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQ 842
            VGSNN+N L+P+G FG+R QGG DAASARYIFTRLSP  R ++   DD +L+Y  +DG+ 
Sbjct: 894  VGSNNVNCLEPSGNFGSRLQGGSDAASARYIFTRLSPFARRVYSALDDPVLEYNVDDGRS 953

Query: 843  IEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL-----NGE--MMEPM 895
            IEP  Y P++P VL+NG++GIGTGWS+ IPNY+P +IV N++R +     +GE    E M
Sbjct: 954  IEPVTYFPVVPMVLINGADGIGTGWSTNIPNYHPVEIVNNLKRRMGRLDDSGEEKPFETM 1013

Query: 896  HPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII- 954
             PW+RG+ GT E          Y   GII E  +T + I ELPIR WT D++  LE II 
Sbjct: 1014 MPWFRGWKGTAEPAGPDR----YKFNGIIRETGDTEVEITELPIRMWTDDFKAKLEEIIK 1069

Query: 955  -DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
             ++  SFI+ +++++D  TV   + + ++ M     EGL +KFKL  T++TSN+  FD +
Sbjct: 1070 AEKVPSFIKDYKEFNDHKTVHMIIQMDDKHMKAALVEGLAEKFKLNKTVATSNLVAFDHR 1129

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G I+KY+  E ILEEF+  R + Y  RK   +  L +E  KL N+ RF+  ++  +++V+
Sbjct: 1130 GQIRKYEKVEDILEEFYEQRFKMYTVRKAYWVNKLNVEYRKLTNQARFVTEIIENKLIVS 1189

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLS 1133
             +K+  L+ ELR++G+  FPK S   EA  AG TD+  E+EE   +     + D+DYLL 
Sbjct: 1190 KKKKPVLVAELRKRGYEGFPKVS---EAKKAGETDDVVENEEEVGIDEDAGARDFDYLLG 1246

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            + I +LT E+V  L   +D   +E+D L + + + LW +DLDA  ++ ++  K DA
Sbjct: 1247 LPIWSLTQERVDKLNKQKDDKKDEIDTLERLSEKDLWCEDLDAFVLEWEDQLKQDA 1302


>gi|195031277|ref|XP_001988321.1| GH10628 [Drosophila grimshawi]
 gi|193904321|gb|EDW03188.1| GH10628 [Drosophila grimshawi]
          Length = 1486

 Score = 1145 bits (2963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 597/1211 (49%), Positives = 812/1211 (67%), Gaps = 97/1211 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE+MYQKKSQLEHILLRPD+YIGS+E   + +W+ + E   M+ R IS+VPGLYKIFDE
Sbjct: 26   SIEQMYQKKSQLEHILLRPDSYIGSVEFTKELMWVLDLEKNRMVQREISFVPGLYKIFDE 85

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M+ +KV ID E +++S+ N+G G+PV +H+EE +YVP +IFGHLLT
Sbjct: 86   ILVNAADNKQRDKSMNTIKVDIDPEKNIVSIWNNGQGIPVTMHKEENMYVPTMIFGHLLT 145

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKL NIFS  F +ET+  +  K +KQ + NNMGK  +P I 
Sbjct: 146  SSNYNDDEKKVTGGRNGYGAKLCNIFSDSFTVETSTKQFRKSFKQTWGNNMGKAGDP-II 204

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G ++T+++F PDL KF M  L+ D+VALM +R  D+A    K V V LNG +VPVK
Sbjct: 205  KDSSGTDFTRITFSPDLTKFKMDSLDKDIVALMSRRAYDVAAST-KGVSVFLNGTKVPVK 263

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F +Y+D++ K+        +   +E   +RWE+ V  SE  FQQVSFVN IAT KGG H
Sbjct: 264  GFKDYIDLFVKNDDEDSGQPIKVVYEACGDRWEVAVCPSERGFQQVSFVNSIATTKGGRH 323

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD+V + V   ++ V+ KKNKN  ++K   V+NHLW+FVN LI+NP FDSQTKE +TL+ 
Sbjct: 324  VDHVVDNVIKQLIEVLKKKNKNGISIKPFQVRNHLWIFVNCLIENPTFDSQTKENMTLQA 383

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
             SFGSKC LS++F+  V+ K+GIVE++L+WA FK   D+ K  G K+  ++GI KLEDAN
Sbjct: 384  KSFGSKCVLSDKFIGSVS-KAGIVESVLAWAKFKAQNDIAKTGGKKSSKIKGIPKLEDAN 442

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG +NS QCTLILTEGDSAK+LA++GL V+GR+ +GVFPLRGKLLNVREA+  Q+  N+
Sbjct: 443  EAGTKNSIQCTLILTEGDSAKSLAVSGLGVIGRNYYGVFPLRGKLLNVREATFKQLTENA 502

Query: 497  EIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            EI N+ KI+GL+   +Y   +++K+LRYG +MIMTDQ                       
Sbjct: 503  EINNLCKIIGLQYKKKYLSIDDLKTLRYGKVMIMTDQ----------------------- 539

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
                 D DGSHIKGLLINFIH+ WP LL++P FL EFITPIVKAT KN + LSFYSMP++
Sbjct: 540  -----DQDGSHIKGLLINFIHTNWPELLRLP-FLEEFITPIVKATKKNEE-LSFYSMPEF 592

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
            E WK     N  +++IKYYKGLGTSTSKE KEYFQ++  H+  F ++   D + I +AF+
Sbjct: 593  EEWKMDTA-NHHTYNIKYYKGLGTSTSKEAKEYFQDMERHRILFKYDGQVDDDNIVMAFA 651

Query: 674  KKKIEARKKWLLQFEPGNHLDQ---------KEKY--------IKYSDFVNKELILFSMA 716
            KK +++RK WL      NH+D+          E+Y        + YSDF+N EL+LFS A
Sbjct: 652  KKHVDSRKTWLT-----NHMDEVKRRKQLGLPERYLYTKGTKQVSYSDFINLELVLFSNA 706

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D +RSIPS+VDGLKPGQRK++F  FKRN  +E KVAQ SG V+E SAYHHGE SL  TI+
Sbjct: 707  DNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIV 766

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQ++VGSNNINLL+P GQFGTR  GGKD ASARYIFT +SP+TR ++   DD LL Y 
Sbjct: 767  NLAQNYVGSNNINLLEPRGQFGTRLTGGKDCASARYIFTLMSPLTRLIYHPLDDPLLQYQ 826

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +DGQ+IEP WY+PIIP VLVNG+EGIGTGWS+ I NYNPR+++ N+RR++NGE    MH
Sbjct: 827  TDDGQRIEPLWYIPIIPMVLVNGAEGIGTGWSTKIANYNPRELINNLRRMINGEEPLLMH 886

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIID 955
            PWY+ F G ++          Y  +G I+ +++  + I ELPI  WTQ Y+E  LE++ +
Sbjct: 887  PWYKNFTGNMDYVNDGR----YVHSGNIQMLSDNRIEITELPIGVWTQTYKENVLEALSN 942

Query: 956  QND---SFIRGFRQYSDDTTVDFEVFLS--EESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
              +   + +  +R++  DTTV F V  +  E   +R++  G  + FKL+++IST+ MH F
Sbjct: 943  GTEKVKAIVSEYREFHTDTTVRFVVSFNPGEFERLRSENGGFHRVFKLSSSISTNQMHAF 1002

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    ++++ +P+ IL EF+ +RLE+Y +RK   +  L  +  +L ++ RFIL     ++
Sbjct: 1003 DDSNCLRRFSSPKDILLEFYKLRLEYYNRRKDYLVGQLTAQADRLSDQARFILEKCEKKL 1062

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP---------------KNSKSIEAVVAGATDETEESEE 1115
            VV N++R  ++ EL ++G+ P P                +++  E    GA+   ++ ++
Sbjct: 1063 VVENKQRKVMIDELIKRGYRPDPVKEWQRRIKIEEAETADAEEEEDEETGASGSGKKVKK 1122

Query: 1116 NPEVVNGVQSI----DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWV 1171
              +     Q +     +DYLL M++  LT E+   LL  RD    E+D+L K TP  LW+
Sbjct: 1123 ELDPEKAFQKLTEVKKFDYLLGMSMWMLTEERKNELLKQRDTKLIELDNLMKKTPNHLWM 1182

Query: 1172 KDLDALDMQLD 1182
             DLD L+ +LD
Sbjct: 1183 DDLDNLEQKLD 1193


>gi|195164670|ref|XP_002023169.1| GL21103 [Drosophila persimilis]
 gi|194105254|gb|EDW27297.1| GL21103 [Drosophila persimilis]
          Length = 1451

 Score = 1145 bits (2962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 593/1213 (48%), Positives = 809/1213 (66%), Gaps = 99/1213 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE+MYQKKSQLEHILLRPD+YIGS+E   + +W+Y+ E   MI R I++VPGLYKIFDE
Sbjct: 8    SIEQMYQKKSQLEHILLRPDSYIGSVEFTKELMWVYDFEKARMIQREIAFVPGLYKIFDE 67

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M+ +K+ ID E +++S+ N+G G+PV +H+E+ +YVP +IFGHLLT
Sbjct: 68   ILVNAADNKQRDKSMNTIKIDIDAEKNVVSIWNNGQGIPVTMHKEQKMYVPTMIFGHLLT 127

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKL NIFST F +ETA  +  K +KQ + +NM K S+  I 
Sbjct: 128  SSNYNDDEKKVTGGRNGYGAKLCNIFSTSFTVETATKQYKKNFKQTWGSNMSKASDVTI- 186

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G ++T+++F PDLAKF M  L++D+VALM +R  D+A    K V V LNG+++ VK
Sbjct: 187  KDFNGTDFTRITFSPDLAKFKMERLDEDIVALMSRRAFDVAAS-SKGVSVFLNGNKLTVK 245

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            +F +Y+D++ K+        +   HE  NERWE+    S+  FQQVSFVN IAT KGG H
Sbjct: 246  NFKDYIDLHVKNQDDDCGQPIKIVHEVANERWEVACCPSDRGFQQVSFVNSIATTKGGRH 305

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD+V + V   ++ V+ KKNK   N+K   V+NHLW+FVN LI+NP FDSQTKE +TL+ 
Sbjct: 306  VDHVVDNVIKQLIEVLKKKNKGGINIKPFQVRNHLWIFVNCLIENPTFDSQTKENMTLQA 365

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
              FGSKC LSE+F+  ++ KSGIVE++L+WA FK   D+ K  G K+  ++GI KLEDAN
Sbjct: 366  KGFGSKCTLSEKFISSLS-KSGIVESVLAWAKFKAQNDIAKTGGRKSSKIKGIPKLEDAN 424

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AGG+NS  CTLILTEGDSAK+LA++GL V+GR+ +GVFPLRGKLLNVREA+  Q+  N+
Sbjct: 425  EAGGKNSINCTLILTEGDSAKSLAVSGLGVIGRNYYGVFPLRGKLLNVREANFKQLSENA 484

Query: 497  EIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            EI N+ KI+GL+   +Y   +++K+LRYG +MIMTDQ                       
Sbjct: 485  EINNLCKIIGLQYKKKYLTEDDLKTLRYGKVMIMTDQ----------------------- 521

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
                 D DGSHIKGLLINF+H+ WP LL++P FL EFITPIVK T KN + LSFYS+P++
Sbjct: 522  -----DQDGSHIKGLLINFVHTNWPELLRLP-FLEEFITPIVKVTKKNEE-LSFYSLPEF 574

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
            E WK     N  ++++KYYKGLGTSTSKE KEYFQ++  H+  F ++   D + I +AFS
Sbjct: 575  EEWKMDTP-NHHTYNVKYYKGLGTSTSKEAKEYFQDMERHRILFKYDGQVDDDNIMMAFS 633

Query: 674  KKKIEARKKWLLQFEPGNHLDQKE-----------------KYIKYSDFVNKELILFSMA 716
            +K IE+RK WL      NH+D+ +                 K+I YSDF+N EL+LFS A
Sbjct: 634  RKHIESRKVWLT-----NHMDEVKRRRELGLPERYLYTKGTKHISYSDFINLELVLFSNA 688

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D +RSIPS+VDGLKPGQRK++F  FKRN  +E KVAQ SG V+E SAYHHGE SL  TI+
Sbjct: 689  DNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIV 748

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQ++VGSNNINLL+P GQFGTR  GGKD ASARYIFT +SP+TR ++   DD LL+Y 
Sbjct: 749  NLAQNYVGSNNINLLEPRGQFGTRLTGGKDCASARYIFTLMSPLTRLIYHPLDDPLLEYQ 808

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +DGQ+IEP WY+PIIP VLVNG+EGIGTGWS+ I NYNPR+I  N+RR++N E   PMH
Sbjct: 809  TDDGQRIEPLWYLPIIPMVLVNGAEGIGTGWSTKIANYNPREITRNLRRMINEEEPLPMH 868

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIID 955
            PWY+ F G +E  +       Y  TG I+ +    + I ELPI  WTQ+Y+E  LE++ +
Sbjct: 869  PWYKNFTGRMEYISDGR----YVHTGNIQILPGERVEITELPIGVWTQNYKENVLEALSN 924

Query: 956  QND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQE--GLLKKFKLTTTISTSNMHLF 1010
              +   + +  +R+Y  DTTV F +  +     R + E  G  + FKL++T+S + MH F
Sbjct: 925  GTEKVKAIVSEYREYHTDTTVRFVISFAPGEFRRIQSEDGGFYRVFKLSSTLSINQMHAF 984

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    +++Y +   +L+EF+ +R+E+Y +RK+  +  L     +L ++ RFIL      +
Sbjct: 985  DQNNCLRRYASSTDVLKEFYQLRVEYYGRRKEYLVGQLTALADRLSDQARFILEKCEKTL 1044

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP--------------------KNSKSIEAVVAGATDET 1110
            VV N++R  +  EL ++G+ P P                    ++ +  +A  + +  + 
Sbjct: 1045 VVENKQRKAMCDELTKRGYRPDPVKEWQRRIKMEDAEPENEEEEDEEGEQAAPSSSKKDV 1104

Query: 1111 EESEENPEVVNGVQSI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESL 1169
            ++  +  +    +  +  +DYLL M++  LT EK   LL  RD    E+D+LRK TP  L
Sbjct: 1105 KKEVDPDKAFKKLTDVKKFDYLLGMSMWMLTEEKKNELLKQRDYKLSELDNLRKRTPHQL 1164

Query: 1170 WVKDLDALDMQLD 1182
            W+ DLDAL+ +L+
Sbjct: 1165 WLDDLDALEQKLN 1177


>gi|195484462|ref|XP_002090705.1| GE12650 [Drosophila yakuba]
 gi|194176806|gb|EDW90417.1| GE12650 [Drosophila yakuba]
          Length = 1441

 Score = 1145 bits (2961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 601/1197 (50%), Positives = 807/1197 (67%), Gaps = 98/1197 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE+MYQKKSQLEHILLRPD+YIGS+E   + +W+Y++    M+ R IS+VPGLYKIFDE
Sbjct: 9    SIEQMYQKKSQLEHILLRPDSYIGSVEFTKELMWVYDKSQNRMVQREISFVPGLYKIFDE 68

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M+ +K+ ID E +++SV N+G G+PV +H+E+ +YVP +IFGHLLT
Sbjct: 69   ILVNAADNKQRDKSMNTIKIDIDPERNIVSVWNNGQGIPVTMHKEQKMYVPTMIFGHLLT 128

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKL NIFST F +ETA  +  K +KQ + NNMGK S+  I 
Sbjct: 129  SSNYNDDEKKVTGGRNGYGAKLCNIFSTSFTVETATREYRKSFKQTWGNNMGKASDVQI- 187

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G ++T+++F PDLAKF M  L++D+VALM +R  D+A    K V V LNG+++ V+
Sbjct: 188  KDFNGTDYTRITFSPDLAKFKMETLDEDIVALMSRRAYDVAAS-SKGVSVFLNGNKLSVR 246

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            +F +Y+D++ KS        +   HE  NERWE+    S+  FQQVSFVN IAT KGG H
Sbjct: 247  NFKDYIDLHVKSSDDDSGPPIKIVHEVANERWEVACCPSDRGFQQVSFVNSIATYKGGRH 306

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD+V + +   ++ V+ KKNK   N+K   V+NHLWVFVN LI+NP FDSQTKE +TL+Q
Sbjct: 307  VDHVVDNLIKQLLEVLKKKNKGGINIKPFQVRNHLWVFVNCLIENPTFDSQTKENMTLQQ 366

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
              FGSKC LSE+F+  ++ KSGIVE++L+WA FK   D+ K  G K+  ++GI KLEDAN
Sbjct: 367  KGFGSKCTLSEKFINNMS-KSGIVESVLAWAKFKAQNDIAKTGGRKSSKIKGIPKLEDAN 425

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AGG+NS  CTLILTEGDSAK+LA++GL V+GR+ +GVFPLRGKLLNVREA+  Q+  N+
Sbjct: 426  EAGGKNSINCTLILTEGDSAKSLAVSGLGVIGRNFYGVFPLRGKLLNVREANFKQLSENA 485

Query: 497  EIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            EI N+ KI+GL+   +Y   +++K+LRYG +MIMTDQ                       
Sbjct: 486  EINNLCKIIGLQYKKKYLTEDDLKTLRYGKVMIMTDQ----------------------- 522

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
                 D DGSHIKGLLINFIH+ WP LL++P FL EFITPIVKAT KN + LSFYS+P++
Sbjct: 523  -----DQDGSHIKGLLINFIHTNWPELLRLP-FLEEFITPIVKATKKNEE-LSFYSLPEF 575

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
            E WK     N  +++IKYYKGLGTSTSKE KEYFQ++  H+  F ++   D E+I +AFS
Sbjct: 576  EEWKNDTA-NHHTYNIKYYKGLGTSTSKEAKEYFQDMERHRILFKYDGSVDDESIVMAFS 634

Query: 674  KKKIEARKKWLLQFEPGNHLDQ----KE-------------KYIKYSDFVNKELILFSMA 716
            KK IE+RK WL      NH+D+    KE             K+I Y+DF+N EL+LFS A
Sbjct: 635  KKHIESRKVWLT-----NHMDEVKRRKELGLPERYLYAKGTKHITYADFINLELVLFSNA 689

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D +RSIPS+VDGLKPGQRK++F  FKRN  +E KVAQ SG V+E SAYHHGE SL  TI+
Sbjct: 690  DNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIV 749

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQ+FVG+NNINLL+P GQFGTR  GGKD ASARYIFT +SP+TR ++   DD LLDY 
Sbjct: 750  NLAQNFVGANNINLLEPRGQFGTRLTGGKDCASARYIFTLMSPLTRLIYHPLDDPLLDYQ 809

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +DGQ+IEP WY+PIIP VLVNG+EGIGTGWS+ I N+NPR+I+ N+R+++NGE  + MH
Sbjct: 810  VDDGQKIEPQWYLPIIPMVLVNGAEGIGTGWSTKIANHNPREIMNNLRKMINGEEPKVMH 869

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIID 955
            PWY+ F G +E  +       Y  TG I+ +    + I ELP+  WTQ+Y+E  LE + +
Sbjct: 870  PWYKNFTGRMEYVSDGR----YVQTGNIQILPGNRVEITELPVGVWTQNYKENVLEPLAN 925

Query: 956  QND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQE--GLLKKFKLTTTISTSNMHLF 1010
              +   + +  +R+Y  DTTV F +  +     R + E  G  + FKLTTT+ST+ MH F
Sbjct: 926  GTEKVKAIVSDYREYHTDTTVRFVITFATGEFERIQAEEGGFHRVFKLTTTLSTNQMHAF 985

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    ++++ T   IL+EF+ +R E+Y +RK   +  L  +  +L ++ RFIL     ++
Sbjct: 986  DQNNCLRRFPTAVDILKEFYQLRREYYARRKDFLVGQLTAQADRLSDQARFILEKCEKKL 1045

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP------------------KNSKSIEAVVAGATDETEE 1112
            VV N++R  +  EL ++G+ P P                  ++ +  EA  + ++   +E
Sbjct: 1046 VVENKQRKAMCDELLKRGYRPDPVKEWQRRIKMEDAEPANEEDDEEEEAAPSVSSKVKKE 1105

Query: 1113 SEENPE-VVNGVQSI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPE 1167
             E +PE     +  +  +DYLL M++  LT EK   LL  RD    E+++LRK TPE
Sbjct: 1106 KEVDPEKAFKKLTDVKKFDYLLGMSMWMLTEEKKNELLKQRDAKLAELENLRKKTPE 1162


>gi|330924028|ref|XP_003300481.1| hypothetical protein PTT_11728 [Pyrenophora teres f. teres 0-1]
 gi|311325363|gb|EFQ91408.1| hypothetical protein PTT_11728 [Pyrenophora teres f. teres 0-1]
          Length = 1723

 Score = 1145 bits (2961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 589/1183 (49%), Positives = 792/1183 (66%), Gaps = 70/1183 (5%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQ  + LEHI+ RPDTYIGS+E+ T  +W+Y  ES +M  R ++YVPGLYKIFDEILVNA
Sbjct: 146  YQMLTHLEHIMKRPDTYIGSVERQTDKMWVYNSESDSMEFRDVTYVPGLYKIFDEILVNA 205

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ D  M  ++V +D+E   IS+ N G G+P+EIH+E G+YVPE+IFGHLLTSSNYD
Sbjct: 206  ADNKQNDKNMSEIRVTVDRETGEISIKNDGKGIPIEIHKEHGIYVPEMIFGHLLTSSNYD 265

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ +K TGGRNGYGAKL N+FSTEF +ET D K+ KKY+Q +T NM K  +  IS  K  
Sbjct: 266  DDQQKVTGGRNGYGAKLCNVFSTEFTVETVDSKQKKKYRQTWTENMSKMGKAKISDIKSE 325

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D +TKVS+K D A+F M+ ++DD  A++K+R  D+AG L + VKV LNG R+ + SFA+Y
Sbjct: 326  D-YTKVSWKADYARFGMSGIDDDFEAMVKRRTYDMAGTL-RGVKVYLNGDRIKLTSFAKY 383

Query: 271  VDMYPKSVTRFHERVNE-------------RWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++MY KS++R   +  +             RW+I   +S+G F QVSFVN IAT  GGTH
Sbjct: 384  MEMYTKSISRDQGKSEDDKEKDVIITDKLDRWDIGFAVSDGSFNQVSFVNSIATTSGGTH 443

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+++A+Q+   +MA+VNKKNK A  +K   +KNHL++FVN  I NPAF SQTKE LT R 
Sbjct: 444  VNHIADQIVEKLMAIVNKKNKAAVKLKPAQIKNHLFLFVNCSIVNPAFTSQTKEQLTTRP 503

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSK  LS++FL  + AK+ +++ ++ +A  K  + +KK DG K   +   +KL DAN
Sbjct: 504  SQFGSKPVLSDKFLNAI-AKTDVIQNIMHFAQQKADQMMKKTDGNKRNRISN-AKLTDAN 561

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG ++   CTLILTEG+SA  LA+AG +VV +D FGVFPLRGKLLNVR+A+ +Q++ N+
Sbjct: 562  KAGTKDGHLCTLILTEGESASVLALAGRAVVNQDLFGVFPLRGKLLNVRDATVDQIMKNA 621

Query: 497  EIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
            EI NIKK +GL+   EY   ++KSLRYGHLMIMTDQ                        
Sbjct: 622  EIQNIKKFMGLQHKKEYTMADMKSLRYGHLMIMTDQ------------------------ 657

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---ATNKNGKVL-SFYSM 610
                DHDGSHIKGLLINF+   +PSLLKIP FL+EFITPIVK      KN + + SF+SM
Sbjct: 658  ----DHDGSHIKGLLINFLQCQFPSLLKIPGFLLEFITPIVKVWKGDPKNPRSMKSFFSM 713

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+YE WKE    +   W  KYYKGLGTS   + + YF+++  H K F    +++ + IEL
Sbjct: 714  PEYEEWKEQ-HQHEKGWDHKYYKGLGTSDIPDAQVYFKDLDTHMKRFQVMREEEEKLIEL 772

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AFSKKK +ARK WL  F PG HLD     I Y DFVNKELILFSMAD  RSIPS++DGLK
Sbjct: 773  AFSKKKADARKDWLRDFVPGQHLDLTTPDISYDDFVNKELILFSMADNVRSIPSVIDGLK 832

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+L+  F+RN  K+ KV + +G VS  + Y HGE S+  TI+ +AQ+FVG+NNIN 
Sbjct: 833  PGQRKVLYTCFRRNIKKDVKVVELAGSVSGSTDYAHGEASMQGTIVNLAQNFVGTNNINF 892

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+P+G FG+R +GG DAASARYI+TRLSP  R +F   DD LL Y   DG +IEP  ++P
Sbjct: 893  LEPSGNFGSRLKGGADAASARYIYTRLSPFARRIFHGHDDALLKYGESDGHKIEPEMFVP 952

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL----NGEMMEPMHPWYRGFGGTI 906
            I+PT+L+NGS GIGTGWSS IPN+NP DI+ N++R +      E M PM PWY+GF GT 
Sbjct: 953  ILPTILINGSSGIGTGWSSEIPNFNPMDIIENIKRRMQPGATKEDMTPMIPWYKGFTGTT 1012

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGF 964
             +         Y  TG + +  +  + I ELP+R WTQD++E LE II  ++  S+I+ +
Sbjct: 1013 TELGPDR----YQFTGTVRQTGDNEVEITELPVRYWTQDFKEKLEEIIKAEKAPSYIKDY 1068

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
              Y+    V F + + ++ M     +GL + FKL    STSN+  FD+ G I KY T   
Sbjct: 1069 IDYNTPDRVHFIIKMEDKYMAEAVTKGLEEYFKLFKPQSTSNLVAFDAHGRIHKYATVLD 1128

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            I+EEF+H+RL +YEKRK+ QL+ +E E LK+ N+ +FI  +++G+++V+ +K+  L+ EL
Sbjct: 1129 IIEEFYHVRLRYYEKRKQHQLQVMEKEHLKMTNQAKFIQMIIDGKLIVSKKKKAVLVQEL 1188

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            ++ GFTPFPK     EA  AG  ++ +E E + +    V + DYDYLL MAI +LT E+V
Sbjct: 1189 KKLGFTPFPKVE---EAKQAGEVEDYQEDEASEDADVEVSANDYDYLLGMAIWSLTQERV 1245

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDE 1183
            + L+    +   E+D L K +P+ +W  DLDA     ++QL+E
Sbjct: 1246 EKLMKQIGEKQHEIDTLIKLSPKDIWKVDLDAFMDEWNLQLEE 1288


>gi|261188733|ref|XP_002620780.1| DNA topoisomerase 2 [Ajellomyces dermatitidis SLH14081]
 gi|239592012|gb|EEQ74593.1| DNA topoisomerase 2 [Ajellomyces dermatitidis SLH14081]
          Length = 1758

 Score = 1144 bits (2959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/1120 (51%), Positives = 765/1120 (68%), Gaps = 70/1120 (6%)

Query: 22   APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
            A  K   E YQK +QLEHI+ RPDTYIGSIE+ T  +W+Y  ES++M  R +SYVPGLYK
Sbjct: 125  ATPKESSERYQKLTQLEHIIKRPDTYIGSIERSTNQMWVYNSESESMEFREVSYVPGLYK 184

Query: 82   IFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            IFDEILVNAADN+  D  MD ++V +++E   ISV N+G G+P+EIH  E VY+PELIFG
Sbjct: 185  IFDEILVNAADNRHNDKNMDEIRVTVNRESGEISVWNNGRGIPIEIHSREKVYIPELIFG 244

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            HLLTSSNY+D+ +K TGGRNGYGAKL NIFSTEF +ETAD K  KKYKQ +T+NM K  +
Sbjct: 245  HLLTSSNYNDDQQKVTGGRNGYGAKLCNIFSTEFTLETADSKLKKKYKQTWTDNMSKMGK 304

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            P I+ CK GD++TKV+F PD  KF M  ++DD  AL+K+RV DLAG     V V+LNG R
Sbjct: 305  PKITDCK-GDDYTKVTFTPDFKKFGMDGIDDDFEALVKRRVYDLAGTC--KVTVKLNGSR 361

Query: 262  VPVKSFAEYVDMYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSFVNG 308
            VPV++F +Y+ MY  ++ +               +  + RWEI   +S+G FQQVSFVN 
Sbjct: 362  VPVRNFKQYMQMYTNAIKKERGEEACRDKSEIITDNPDPRWEIGFAVSDGSFQQVSFVNS 421

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            IAT  GG+HV+ VA+Q+ N ++ VV KKNK  A +K   ++NH++VFVN+ I NPAF SQ
Sbjct: 422  IATTSGGSHVNTVADQICNKLVEVVKKKNKTGATLKPAQIRNHIFVFVNSQIVNPAFTSQ 481

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
            TKE LT + S FGSKC LS++FLKK+  K+ ++E ++ +A  K  + LKK+DG +   + 
Sbjct: 482  TKEQLTTKPSQFGSKCVLSDDFLKKIL-KTQVMENIMHFAEKKADQILKKSDGNRRSRMN 540

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
               KL DAN AG ++   CTLILTEGDSAK LAMAG ++VG D FGVFPLRGKLLNVR+A
Sbjct: 541  N-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAIVGPDLFGVFPLRGKLLNVRDA 599

Query: 488  SSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            S +Q+  N+EI NIK  LGL+   EY + K LRYGHLMIMTDQ                 
Sbjct: 600  SVDQISKNAEIQNIKNFLGLQHKKEYTDTKGLRYGHLMIMTDQ----------------- 642

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---ATNKNGKV 604
                       DHDGSHIKGLLINF    +PSLLKIP FL+EFITPIVK      KN  +
Sbjct: 643  -----------DHDGSHIKGLLINFFQVAFPSLLKIPQFLIEFITPIVKVWKGDPKNPTI 691

Query: 605  L-SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
              SF++M +YE W E + G+   W  KYYKGLGTST+ + + YF+++  H K F    D 
Sbjct: 692  SKSFFTMQEYETWLE-IHGHDKRWEKKYYKGLGTSTTDDAEIYFRDLDRHLKQFHVMRDH 750

Query: 664  DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIP 723
            + E I+LAFSKKK + RK+WL QF+PG  LD   + I Y+DF+NKELILFSMAD  RSIP
Sbjct: 751  EAELIDLAFSKKKADERKEWLRQFKPGTFLDHTTEEITYTDFINKELILFSMADNIRSIP 810

Query: 724  SMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFV 783
            S++DGLKPGQRK+L+  FK N  K+ KVA+ SGYV   +AY HG+ SL  TI+G+AQ+FV
Sbjct: 811  SVIDGLKPGQRKVLYTCFKLNVKKDMKVAELSGYVLGLTAYQHGDASLQQTIIGLAQNFV 870

Query: 784  GSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQI 843
            GSNNIN L+P+G FG+R QGG DAAS RYI+TRLSP  R +F + D  LL Y  +DGQ I
Sbjct: 871  GSNNINCLEPSGNFGSRLQGGSDAASPRYIYTRLSPFARRIFHEADGPLLTYNVDDGQVI 930

Query: 844  EPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFG 903
            EP  Y P++P +L+NG++GIGTGWS+ IPNYNP +IVAN++RL+ GE + PM PW+RGF 
Sbjct: 931  EPETYFPVVPMILINGADGIGTGWSTSIPNYNPEEIVANIKRLMVGEPVVPMQPWFRGFT 990

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFI 961
            G +        G  Y  +G   ++ +  + I ELPIR WTQD+++ LE II  ++  SFI
Sbjct: 991  GEVVSM----GGERYKFSGRFSQIGDNEIEITELPIRSWTQDFKDRLEEIIKAEKIPSFI 1046

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDT 1021
            + ++ Y+  T V F + L E+   +T  EGL +K KLT T++TSN+  FDS+G I KY++
Sbjct: 1047 KDYKDYNTHTKVHFVIQLDEKHAKKTIAEGLEEKLKLTKTLATSNLVAFDSEGRITKYES 1106

Query: 1022 PEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLL 1081
            PE IL+EF+ +R++ YEKRK+ QL  ++ +L KL N+ RF+  +++G++V++ + +  L+
Sbjct: 1107 PEHILQEFYSVRIKLYEKRKQHQLSQMQKDLEKLSNQARFVQMIIDGKLVISKKPKAQLV 1166

Query: 1082 LELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVN 1121
             EL++KGF             +A  +D  ++ E+ P VVN
Sbjct: 1167 QELKEKGF-----------KAIAKVSDAAKQGEKAP-VVN 1194


>gi|38453807|dbj|BAD02204.1| DNA topoisomerase II [Arthroderma persicolor]
          Length = 1086

 Score = 1144 bits (2958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/1127 (52%), Positives = 783/1127 (69%), Gaps = 61/1127 (5%)

Query: 33   KKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAAD 92
            K +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNAAD
Sbjct: 1    KITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNAAD 60

Query: 93   NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN 152
            NKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D 
Sbjct: 61   NKQNDPSMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEQIYIPELIFGHLLTSSNYNDM 120

Query: 153  VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             +K TGGRNGYGAKL NIFS EF +ETAD  + KK+K  +TNNM    +  I++ K GD+
Sbjct: 121  QEKVTGGRNGYGAKLCNIFSNEFTVETADSSKKKKFKLTWTNNMSTMGKAKITESK-GDD 179

Query: 213  WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            +TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+P+KSF +Y++
Sbjct: 180  YTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTAVK--LNGTRIPIKSFKKYME 237

Query: 273  MYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
            MY K++                 E  + RWEI  T+S+G FQQVSFVN IAT  GGTHV+
Sbjct: 238  MYTKAIKTERGEDPTSDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTHVN 297

Query: 320  YVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT R S 
Sbjct: 298  YISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNSQIVNPAFTSQTKEQLTTRASQ 357

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLA 438
            FGSKC +S+EFLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN A
Sbjct: 358  FGSKCIVSDEFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDANKA 415

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            G +    CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+EI
Sbjct: 416  GTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNAEI 475

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
             NIK  +GL+   EY + + LRYGHLMIMTDQ                            
Sbjct: 476  QNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ---------------------------- 507

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPDYE 614
            DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++P+YE
Sbjct: 508  DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHSKSFFTLPEYE 567

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
             WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K+F    D++ E IELAFSK
Sbjct: 568  EWKET-HAHDKKWQKKYYKGLGTSSTEDAQIYFQDLDKHLKEFHTLQDKEAELIELAFSK 626

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            KK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPGQR
Sbjct: 627  KKADERKEWLRQFKPGTYLDHSTDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQR 686

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+P+
Sbjct: 687  KVLYTMFKRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPS 746

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++P 
Sbjct: 747  GNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNVDDGKVIEPETYVPVVPL 806

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            +L+NG++GIGTGWS+ IPNYNP D+V N++RL+ GE + PM PW+RGF G  E T S   
Sbjct: 807  ILINGADGIGTGWSTSIPNYNPEDVVDNLKRLMAGEELVPMKPWFRGFKG--EVTGS--- 861

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTT 972
            G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  T 
Sbjct: 862  GDRYKFSGIIKQTADNEVEISELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYNTHTN 921

Query: 973  VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
            V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  F+ +
Sbjct: 922  VHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRAFYAV 981

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            R++ YEKRK+  L  L+ +L KL N+ RFI  +++G++V++ +K+  L+ EL++KGF PF
Sbjct: 982  RIKLYEKRKQHLLSELQTQLDKLSNQARFIQMIIDGKLVISKKKKALLIQELQEKGFKPF 1041

Query: 1093 PKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            PK + + E   AG  D  E+ EE   V   + S  YDYLLSM + +L
Sbjct: 1042 PKVADTPEPGEAG--DIEEDEEEEETVTATLASDAYDYLLSMPLWSL 1086


>gi|301110016|ref|XP_002904088.1| DNA topoisomerase 2 [Phytophthora infestans T30-4]
 gi|262096214|gb|EEY54266.1| DNA topoisomerase 2 [Phytophthora infestans T30-4]
          Length = 1505

 Score = 1144 bits (2958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 602/1231 (48%), Positives = 791/1231 (64%), Gaps = 145/1231 (11%)

Query: 19   GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPG 78
            G   P ++IE++YQKK+QLEHILLRPDTY+GSIE   Q++W++++E + M+ + I+YVPG
Sbjct: 90   GKGTPKQSIEQIYQKKTQLEHILLRPDTYVGSIEHVEQSMWVFDDEKQRMVLKKINYVPG 149

Query: 79   LYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
            LYKIFDEI+VNA DNKQRD  M+ +KV ID E + ISV N+G G+P+ +H+E  VYVPEL
Sbjct: 150  LYKIFDEIIVNACDNKQRDKSMNTLKVTIDVEKNEISVWNNGKGIPIVLHKEHKVYVPEL 209

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            IFGHLLT SN+DD  KKTTGGRNGYGAKL NIFS EF++ETAD    +KYKQVF +NM K
Sbjct: 210  IFGHLLTGSNFDDKKKKTTGGRNGYGAKLANIFSNEFVVETADSSTKQKYKQVFESNMSK 269

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
            K+ P+I+K  + D +T +SFKPDL +F +  L DD+V+L KKRV D+AG  GK + V LN
Sbjct: 270  KNPPSITKWAQKD-FTCISFKPDLERFKLDFLNDDIVSLFKKRVYDVAGVSGKGMNVFLN 328

Query: 259  GHRVPVKSFAEYVDMY-------------------------------------------- 274
            G ++P+KSF +YV +Y                                            
Sbjct: 329  GDKIPIKSFPQYVALYPGPRGYEADKDKDDEDAHPDENGDDDDEDYSEDKAKKAKAARAK 388

Query: 275  PKSVTR---FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
            P +VT+     E+ +ERW++ V +SE  FQQ              HV Y+ +Q+   +++
Sbjct: 389  PSNVTKNGVIFEKPDERWQVGVGMSEDGFQQ--------------HVSYIVDQITAKLVS 434

Query: 332  VVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLK 391
            V+ KKNK   VK + +KNH++V+V+ALIDNPAFDSQTKETLT R +SFGS   LS++FLK
Sbjct: 435  VLKKKNKGEAVKPNYIKNHMFVYVSALIDNPAFDSQTKETLTTRANSFGSTFNLSDKFLK 494

Query: 392  KVTAKSGIVETLLSWANFKQSKDLKKNDGT--KTEDVRGISKLEDANLAGGRNSEQCTLI 449
            ++  KSG+VE +LS+A FKQ+ +L++  G+  K   + GI KL+DAN AG   S+ CTLI
Sbjct: 495  QL-EKSGLVEKILSFAAFKQTAELRRKGGSSGKRSRLTGIPKLDDANHAGTAKSKDCTLI 553

Query: 450  LTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQ 509
            LTEGDSAK                                  +L N EI N+ KILGLK 
Sbjct: 554  LTEGDSAKT---------------------------------ILKNEEIQNVVKILGLKY 580

Query: 510  GVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLL 569
            G +Y + K LRYGHLMIM D                            QDHDGSHIKGL+
Sbjct: 581  GQKYESTKGLRYGHLMIMAD----------------------------QDHDGSHIKGLV 612

Query: 570  INFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSI 629
            IN IH FWPSLL +  FL EFITPIVK T    K + FY+MP+YEAW+E        W I
Sbjct: 613  INLIHHFWPSLLVVDGFLQEFITPIVKCTKGRTKEV-FYTMPEYEAWRERT-NQGRGWVI 670

Query: 630  KYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEP 689
            KYYKGLGTST+ E KEYF ++  H+  F ++ D D + I++AFSKK++E RK WL  +EP
Sbjct: 671  KYYKGLGTSTAAETKEYFSDLQTHQIGFTYDGDGDADVIDMAFSKKRVEDRKDWLRGYEP 730

Query: 690  GNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEA 749
            G ++D     + Y++FVNKELILFSMAD  RSIPS++DG KP QRK+LFC FKRN   E 
Sbjct: 731  GTYVDYDVDEMGYTEFVNKELILFSMADNIRSIPSVMDGFKPSQRKVLFCCFKRNLRAEL 790

Query: 750  KVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAAS 809
            KVAQ +GYVSEHSAYHHGE SL   I+ MAQDFVGSNNI+LL P GQFGTR  GGKDAAS
Sbjct: 791  KVAQLAGYVSEHSAYHHGEASLQGCIVNMAQDFVGSNNIHLLSPIGQFGTRLMGGKDAAS 850

Query: 810  ARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSS 869
            ARYIFT L  +TR ++   D+  L YL+EDGQ IEP WY+PIIP VLVNGS+GIGTGWSS
Sbjct: 851  ARYIFTNLEQLTRLIYHPLDNDCLKYLSEDGQSIEPEWYIPIIPMVLVNGSDGIGTGWSS 910

Query: 870  YIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVT--YTVTGIIEEV 927
             +PNYNP DI+  +R+++NGE + P+ PWYRGF G I + A+     T  Y V G+ E  
Sbjct: 911  SVPNYNPLDIIKGLRQMINGEEIAPLTPWYRGFTGHIVEKANSRGTDTGNYIVQGLYEVT 970

Query: 928  NETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRT 987
            +++TL + ELP++ WTQ Y++FLE ++D     I+ F++   D  V F + +  +++   
Sbjct: 971  DDSTLVVSELPVKSWTQTYKQFLEGLLDAGT--IKDFKENHTDVKVLFTITMEPKALSDV 1028

Query: 988  KQE--GLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQL 1045
             +   G++KKFKL +++STSNMHLFD+ G IKKY+ P++I+ EF+ IRLE+Y +RKK  L
Sbjct: 1029 TKAPGGIVKKFKLESSLSTSNMHLFDAAGHIKKYENPKEIMAEFYGIRLEYYGRRKKAML 1088

Query: 1046 ENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAG 1105
            + L+ ++  L NK RF+L VV G++VVNNRK+ +LL EL  +G+      +K        
Sbjct: 1089 QKLQDQIKLLSNKARFVLAVVEGKLVVNNRKKQELLEELMAEGYDQIVSKTKKKPDNED- 1147

Query: 1106 ATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKAT 1165
                 E  +E P V +   S  YDYLLSM I +LT E+V  L A+  +   E   L   T
Sbjct: 1148 ---SNESEDEEPNVAD--VSRGYDYLLSMKIWSLTKERVDKLRAELQEREHEYSVLEGRT 1202

Query: 1166 PESLWVKDLDALDMQLDELDKSDARAEEERM 1196
             + LW+ DLDAL+  L E +     AE ER+
Sbjct: 1203 VQDLWLTDLDALEKMLVETE-----AERERI 1228


>gi|294950051|ref|XP_002786436.1| DNA topoisomerase 2-alpha, putative [Perkinsus marinus ATCC 50983]
 gi|239900728|gb|EER18232.1| DNA topoisomerase 2-alpha, putative [Perkinsus marinus ATCC 50983]
          Length = 1579

 Score = 1144 bits (2958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 604/1242 (48%), Positives = 809/1242 (65%), Gaps = 104/1242 (8%)

Query: 20   PTAP---NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYV 76
            P+AP    K++E++Y+K +Q+EHIL RPDTY+GS+E  T+ +W++E E+  ++ + I++ 
Sbjct: 5    PSAPRHGGKSVEQIYKKMTQIEHILARPDTYVGSLEHQTERMWVWESETGHIVQKQITFC 64

Query: 77   PGLYKIFDEILVNAADNKQRDPK-MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYV 135
            PGLYKIFDEILVNAADN QRDPK M+ +KV ID E+  I V+N+G G+P++IH+E  VYV
Sbjct: 65   PGLYKIFDEILVNAADNLQRDPKHMNTIKVDIDAENGFIKVYNNGKGLPIQIHKEHHVYV 124

Query: 136  PELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNN 195
            PEL+FGHLLTS NYDD  KK TGGRNGYGAKL+NIFS +F+I TAD  R K YKQ F  +
Sbjct: 125  PELVFGHLLTSDNYDDKEKKVTGGRNGYGAKLSNIFSKKFLITTADRTRKKLYKQQFEKS 184

Query: 196  MGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGC-LGKSVK 254
            M KK EP I+   + D +T V F PDL KF MTHL+ D+V+LM KRV+D+AG    K  K
Sbjct: 185  MQKKKEPVITDYDKED-FTCVQFWPDLEKFGMTHLDADIVSLMSKRVIDVAGTSASKKCK 243

Query: 255  VELNGHRVPVKSFAEYVDMY--------PK----------SVTRFHERVNERWEICVTLS 296
            V LNG RVP+ SF +Y ++Y        PK           V+  H +V++RWE+ VTLS
Sbjct: 244  VYLNGKRVPISSFKDYAELYLTGEWVDAPKIYEKVARANVYVSCGHVQVSDRWEVLVTLS 303

Query: 297  E-----GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNH 350
            +     GQFQQVSF N I T+KGGTHV++VA Q+ N V+     KNK    +K   VKNH
Sbjct: 304  DPAGGGGQFQQVSFANSINTVKGGTHVNHVAEQIVNAVLKKAQTKNKGGMELKPFQVKNH 363

Query: 351  LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFK 410
            +W+FVNALI+NP FDSQTKETLTL+ + FGSKC LSE  +KKV + SGIV+ +++WA FK
Sbjct: 364  MWLFVNALIENPTFDSQTKETLTLKVAKFGSKCVLSEGTMKKVLS-SGIVDQVVNWAKFK 422

Query: 411  QSKDLK---KNDGTKTED-VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSV 466
            Q+  L+   K  GT  +  + G+ KLEDAN AGGR S++CTLILTEGDSAKALA+AGL V
Sbjct: 423  QTATLQSKIKVGGTGGQTRIFGVPKLEDANDAGGRYSDRCTLILTEGDSAKALAVAGLGV 482

Query: 467  VGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMI 526
            +GRD++GVFPLRGK+LNVREAS  Q ++N EI  I KI+GL+    Y+ VK LRYG +M+
Sbjct: 483  IGRDKYGVFPLRGKVLNVREASYKQTVDNKEIQAILKIIGLEPRKAYDGVKGLRYGSIMV 542

Query: 527  MTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSF 586
            MTDQ                            D DGSHIKGLLIN +H +WP LL+   F
Sbjct: 543  MTDQ----------------------------DLDGSHIKGLLINLVHHWWPGLLQTRGF 574

Query: 587  LVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEY 646
            + EF+TPIVK   K  + LSF+++ +YE WK +   +   W IKYYKGLGTSTSKE ++Y
Sbjct: 575  MKEFVTPIVKCV-KGRRELSFFTLTEYEEWKRN-NNDGKGWKIKYYKGLGTSTSKEAQQY 632

Query: 647  FQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFV 706
            F  I+ H   F + D  DGEAI++AF+KK+ + RK+W+  +  G+ +D  +  ++Y DF+
Sbjct: 633  FSQISKHSLSFDYRDGDDGEAIDMAFNKKRADDRKEWINGYADGDCVDHSKASLRYLDFI 692

Query: 707  NKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHH 766
            NKEL+ FS  D+ RSIPSMVDG KP QRK+LFC+ KRN   + KVAQF GYVSEHSAYHH
Sbjct: 693  NKELVQFSKYDVMRSIPSMVDGFKPSQRKVLFCALKRNLKSDTKVAQFVGYVSEHSAYHH 752

Query: 767  GEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFP 826
            GEQSL S I+GMAQDF GSNN+NLL P+GQFGTR QGGKDAAS RYI+TRLS  TR +F 
Sbjct: 753  GEQSLESCIVGMAQDFTGSNNLNLLFPSGQFGTRQQGGKDAASGRYIYTRLSKYTRTIFH 812

Query: 827  KDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRL 886
             DDD +L+YL E+GQ IEP WY PIIP VLVNG+EGIGTGWS+ + +Y+PR+I+  +R L
Sbjct: 813  PDDDDVLEYLTEEGQSIEPKWYCPIIPMVLVNGAEGIGTGWSTNVLSYDPREIIHLLRAL 872

Query: 887  LNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEV-NETTLRIKELPIRRWTQD 945
            + G  +  +HPWYRGF G++E+         Y   G +    ++ T+ I ELP++ WTQ+
Sbjct: 873  IRGVELHDIHPWYRGFTGSVERNDKN----GYDFVGKVRMASDDRTVDITELPVKTWTQN 928

Query: 946  YREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQE-GLLKKFKLTTTIST 1004
            Y++    ++      +    +Y  + +V F+  L  E+        GL K FKL +  ST
Sbjct: 929  YKDLDTLVVS-----VILLGRYHTEHSVHFKCTLQNEAAKSVVDSLGLEKAFKLRSAFST 983

Query: 1005 SNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILG 1064
            +NM LFD  G I++YD+   I+++F  +RL+ Y KRK   +  L  E+L L NK RF++ 
Sbjct: 984  TNMVLFDRDGKIRRYDSVLDIIKDFADLRLDMYVKRKDSLIAKLTKEILILSNKCRFVMM 1043

Query: 1065 VVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAG--------ATDETEESEEN 1116
            V+NGEIV   +K   L+ EL++K F    +      A   G        A+  T +  ++
Sbjct: 1044 VINGEIVFQKKKIVQLMEELKRKKFMTMMEIDAQTRAAKIGSLKGKTVAASSATSDEVKS 1103

Query: 1117 PEVVNGVQSID--------------YDYLLSMAIGTLTLEKVQG---LLADRDKLNEEVD 1159
                +  +                 YDYLL+M++ +LTLE+V+    LL D++    E+ 
Sbjct: 1104 EGESSEEEEEADEEAKVEKQQKRSGYDYLLAMSMWSLTLERVEAMERLLHDKEG---ELK 1160

Query: 1160 DLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGN 1201
             LR  + E +W +DL  L   LDE D+  A+  +   + + N
Sbjct: 1161 VLRGRSIEEMWDRDLVQLLAALDEDDERRAKDIQAEARYRKN 1202


>gi|195438268|ref|XP_002067059.1| GK24224 [Drosophila willistoni]
 gi|194163144|gb|EDW78045.1| GK24224 [Drosophila willistoni]
          Length = 1453

 Score = 1143 bits (2956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/1197 (49%), Positives = 803/1197 (67%), Gaps = 98/1197 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE+MYQKK+QLEHILLRPD+YIGS+E   + +W+Y+ E+  M+ R IS+VPGLYKIFDE
Sbjct: 12   SIEQMYQKKTQLEHILLRPDSYIGSVEYTKELMWVYDFENNRMVQREISFVPGLYKIFDE 71

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M+A+K+ ID E ++IS+ N+G G+PV +H+E+ +YVP +IFGHLLT
Sbjct: 72   ILVNAADNKQRDKSMNAIKIDIDAEKNVISIWNNGQGIPVTMHKEQKMYVPTMIFGHLLT 131

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKL NIFST F +ETA  +  K ++Q + NNMGK SE NI 
Sbjct: 132  SSNYNDDEKKVTGGRNGYGAKLCNIFSTSFTLETATKQYKKSFQQTWANNMGKASEANI- 190

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G ++T+++F PDL+KF M  L++D+VALM +R  D+A    K V V LNG+++ VK
Sbjct: 191  KDFNGTDFTRITFSPDLSKFKMEKLDEDIVALMSRRAFDVAAST-KGVSVFLNGNKLSVK 249

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            +F +Y+D++ K+        +   +E   ERWE+    S+  FQQVSFVN IAT KGG H
Sbjct: 250  NFKDYIDLHIKNQDSDSGQPIKVVYEACGERWEVACCPSDRGFQQVSFVNSIATYKGGRH 309

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD+V + V   ++ V+ KKNK   N+K   V+NHLW+FVN LI+NP FDSQTKE +TL+ 
Sbjct: 310  VDHVVDGVIKQLIEVLKKKNKGGINIKPFQVRNHLWIFVNCLIENPTFDSQTKENMTLQA 369

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
             SFGSKC LSE+F+  V+ KSGIVE++L+WA FK   D+ K  G K+  ++GI KLEDAN
Sbjct: 370  KSFGSKCTLSEKFIANVS-KSGIVESVLAWAKFKAQNDIAKTGGRKSGKIKGIPKLEDAN 428

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AGG+NS QCTLILTEGDSAK+LA++GL V+GR+ +GVFPLRGKLLNVREA+  Q+  N+
Sbjct: 429  EAGGKNSIQCTLILTEGDSAKSLAVSGLGVIGRNYYGVFPLRGKLLNVREANFKQLTENA 488

Query: 497  EIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            EI N+ KI+GL+   +Y   +++K+LRYG +MIMTDQ                       
Sbjct: 489  EINNLCKIIGLQYKKKYLTEDDLKTLRYGKVMIMTDQ----------------------- 525

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
                 D DGSHIKGLLINFIH+ WP LL++P FL EFITPIVKAT KN + LSFYS+P++
Sbjct: 526  -----DQDGSHIKGLLINFIHTNWPELLRLP-FLEEFITPIVKATKKNEE-LSFYSLPEF 578

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
            E WK     N +++ IKYYKGLGTSTSKE KEYFQ++  H+  F ++   D + I +AFS
Sbjct: 579  EEWKMDTP-NHATYHIKYYKGLGTSTSKEAKEYFQDMERHRILFKYDGQADDDNIVMAFS 637

Query: 674  KKKIEARKKWLLQFEPGNHLDQKE-----------------KYIKYSDFVNKELILFSMA 716
            KK +++RK WL      NH+D+ +                 K+I YSDF+N EL+LFS +
Sbjct: 638  KKHVDSRKTWLT-----NHMDEVKRRKQLNLPERYLYTKGTKHITYSDFINLELVLFSNS 692

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D +RSIPS+VDGLKPGQRK++F  FKRN  +E KVAQ SG V+E SAYHHGE SL  TI+
Sbjct: 693  DNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIV 752

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQ++VGSNNINLL+P GQFGTR  GGKD ASARYIFT +SP+TR ++   DD LLDY 
Sbjct: 753  NLAQNYVGSNNINLLEPRGQFGTRLTGGKDCASARYIFTLMSPLTRLIYHPLDDPLLDYQ 812

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +DGQ+IEP WY+PIIP VLVNG+EGIGTGWS+ I N+NPR+I+ N+RR++N E   PMH
Sbjct: 813  TDDGQRIEPLWYLPIIPMVLVNGAEGIGTGWSTKIANHNPREIIRNLRRMINSEDPLPMH 872

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYR----EFLES 952
            PWY+ F G IE  +       Y  TG I+ +    + I ELP+  WTQ Y+    E L +
Sbjct: 873  PWYKNFRGRIEYVSDGR----YVHTGNIQMLPGDRIEITELPLGVWTQTYKENVLEVLSN 928

Query: 953  IIDQNDSFIRGFRQYSDDTTVDFEVFLS--EESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
              D+  + +  +R+Y  DTTV F V  +  E + +R+++ G  + FKLT+++ST+ MH F
Sbjct: 929  GTDKVKAVVSEYREYHTDTTVRFVVSFAPGEFNRLRSEEGGFYRVFKLTSSLSTNQMHAF 988

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    ++++ +   IL+EF+ +R+E+Y +RK   +  L  +  +L ++ RFIL      +
Sbjct: 989  DQSNCLRRFPSSIDILKEFYTLRVEYYCRRKDYLVGQLTAQADRLSDQARFILEKCEKTL 1048

Query: 1071 VVNNRKRTDLLLELRQKGFTPFPKN--SKSIE------------------AVVAGATDET 1110
            VV N++R  +  EL ++G+ P P     +SI+                  A  +G+    
Sbjct: 1049 VVENKQRKAMCEELAKRGYRPDPVKEWQRSIKLEDAEKDEEEDEGEEAGEAAASGSKKVK 1108

Query: 1111 EESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPE 1167
            +E +             +DYLL M++  LT EK   LL  RD    E+D+L K TP+
Sbjct: 1109 KEVDPEKAFKKLTDVKKFDYLLGMSMWMLTEEKKNELLKQRDSKLSELDNLMKKTPQ 1165


>gi|194879545|ref|XP_001974253.1| GG21630 [Drosophila erecta]
 gi|190657440|gb|EDV54653.1| GG21630 [Drosophila erecta]
          Length = 1446

 Score = 1142 bits (2955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 599/1197 (50%), Positives = 807/1197 (67%), Gaps = 98/1197 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE+MYQKKSQLEHILLRPD+YIGS+E   + +W+Y+     M+ R IS+VPGLYKIFDE
Sbjct: 9    SIEQMYQKKSQLEHILLRPDSYIGSVEFTKELMWVYDNSQNRMVQREISFVPGLYKIFDE 68

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M+ +K+ ID E +++SV N+G G+PV +H+E+ +YVP +IFGHLLT
Sbjct: 69   ILVNAADNKQRDKSMNTIKIDIDPERNIVSVWNNGQGIPVTMHKEQKMYVPTMIFGHLLT 128

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKL NIFST F +ETA  +  K +KQ + NNMGK S+  I 
Sbjct: 129  SSNYNDDEKKVTGGRNGYGAKLCNIFSTSFTVETATREYKKSFKQTWGNNMGKASDVQI- 187

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G ++T+++F PDLAKF M  L++D+VALM +R  D+A    K V V LNG+++ V+
Sbjct: 188  KDFNGTDYTRITFSPDLAKFKMESLDEDIVALMSRRAYDVAAS-SKGVSVFLNGNKLAVR 246

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            +F +Y+D++ KS        +   HE  NERWE+    S+  FQQVSFVN IAT KGG H
Sbjct: 247  NFKDYIDLHVKSTDDDSGPPIKIVHEVANERWEVACCPSDRGFQQVSFVNSIATYKGGRH 306

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD+V + +   ++ V+ KKNK   N+K   V+NHLWVFVN LI+NP FDSQTKE +TL+Q
Sbjct: 307  VDHVVDNLIKQLLEVLKKKNKGGINIKPFQVRNHLWVFVNCLIENPTFDSQTKENMTLQQ 366

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
              FGSKC LSE+F+  ++ KSGIVE++L+WA FK   D+ K  G K+  ++GI KLEDAN
Sbjct: 367  KGFGSKCTLSEKFINNMS-KSGIVESVLAWAKFKAQNDIAKTGGRKSSKIKGIPKLEDAN 425

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AGG+NS  CTLILTEGDSAK+LA++GL V+GR+ +GVFPLRGKLLNVREA+  Q+  N+
Sbjct: 426  EAGGKNSINCTLILTEGDSAKSLAVSGLGVIGRNFYGVFPLRGKLLNVREANFKQLSENA 485

Query: 497  EIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            EI N+ KI+GL+   +Y   +++K+LRYG +MIMTDQ                       
Sbjct: 486  EINNLCKIIGLQYKKKYLTEDDLKTLRYGKVMIMTDQ----------------------- 522

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
                 D DGSHIKGLLINFIH+ WP LL++P FL EFITPIVKAT KN + LSFYS+P++
Sbjct: 523  -----DQDGSHIKGLLINFIHTNWPELLRLP-FLEEFITPIVKATKKNEE-LSFYSLPEF 575

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
            E WK     N  +++IKYYKGLGTSTSKE KEYFQ++  H+  F ++   D E+I +AFS
Sbjct: 576  EEWKNDTA-NHHTYNIKYYKGLGTSTSKEAKEYFQDMERHRILFKYDGSVDDESIVMAFS 634

Query: 674  KKKIEARKKWLLQFEPGNHLDQ----KE-------------KYIKYSDFVNKELILFSMA 716
            KK IE+RK WL      NH+D+    KE             K+I Y+DF+N EL+LFS A
Sbjct: 635  KKHIESRKVWLT-----NHMDEVKRRKELGLPERYLYTKGTKHISYADFINLELVLFSNA 689

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D +RSIPS+VDGLKPGQRK++F  FKRN  +E KVAQ SG V+E SAYHHGE SL  TI+
Sbjct: 690  DNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIV 749

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQ+FVG+NNINLL+P GQFGTR  GGKD ASARYIFT +SP+TR ++   DD LLDY 
Sbjct: 750  NLAQNFVGANNINLLEPRGQFGTRLTGGKDCASARYIFTLMSPLTRLIYHPLDDPLLDYQ 809

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +DGQ+IEP WY+PIIP VLVNG+EGIGTGWS+ I N+NPR+I++N+R+++NGE  + MH
Sbjct: 810  VDDGQKIEPQWYLPIIPMVLVNGAEGIGTGWSTKISNHNPREIMSNLRKMINGEEPKVMH 869

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIID 955
            PWY+ F G +E  +       Y  TG I+ +      I ELP+  WTQ+Y+E  LE + +
Sbjct: 870  PWYKNFTGRMEYVSDGR----YVQTGNIQILPGNRAEITELPVGVWTQNYKENVLEPLAN 925

Query: 956  QND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQE--GLLKKFKLTTTISTSNMHLF 1010
              +   + I  +R+Y  DTTV F +  +     R + E  G  + FKLTTT+ST+ MH F
Sbjct: 926  GTEKVKAIISDYREYHTDTTVRFVISFAPGEFERIQAEDGGFYRVFKLTTTLSTNQMHAF 985

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    ++++ T   IL+EF+ +R E+Y +RK   +  L  +  +L ++ RFI+   + ++
Sbjct: 986  DHNNCLRRFPTAIDILKEFYELRREYYARRKDFLVGQLTAQADRLSDQARFIVEKCDKKL 1045

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP------------------KNSKSIEAVVAGATDETEE 1112
            VV N++R  +  EL ++G+ P P                  ++ +  EA  + ++   +E
Sbjct: 1046 VVENKQRKAMCDELLKRGYRPDPVKEWQRRIKMEDAEPANEEDDEEEEAAPSASSKVKKE 1105

Query: 1113 SEENPE-VVNGVQSI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPE 1167
             + +P+     +  +  +DYLL M++  LT EK   LL  RD    E+++LRK TPE
Sbjct: 1106 KDVDPDKAFKKLTDVKKFDYLLGMSMWMLTEEKKNELLKQRDAKLSELENLRKKTPE 1162


>gi|194761210|ref|XP_001962822.1| GF15632 [Drosophila ananassae]
 gi|190616519|gb|EDV32043.1| GF15632 [Drosophila ananassae]
          Length = 1456

 Score = 1142 bits (2955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/1198 (49%), Positives = 809/1198 (67%), Gaps = 99/1198 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE+MYQKKSQLEHILLRPD+YIGS+E   + +W+Y+ E   M+ R +S+VPGLYKIFDE
Sbjct: 13   SIEQMYQKKSQLEHILLRPDSYIGSVEYTKELMWVYDFEKNRMVQRELSFVPGLYKIFDE 72

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M+ +K+ ID E +++S+ N+G G+PV +H+E+ +YVP +IFGHLLT
Sbjct: 73   ILVNAADNKQRDKSMNTIKIDIDPERNVVSIWNNGQGIPVTMHKEQKMYVPTMIFGHLLT 132

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKL NIFST F +ETA  +  K +KQ + NNM K S+P I 
Sbjct: 133  SSNYNDDEKKVTGGRNGYGAKLCNIFSTSFTVETATKQYKKSFKQTWGNNMAKASDPTI- 191

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G ++T+++F PDLAKF M  LE+D+VALM +R  D+A    K V V LNG ++ VK
Sbjct: 192  KDFNGSDFTRITFSPDLAKFKMESLEEDIVALMSRRAFDVAAST-KGVAVFLNGTKLTVK 250

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            +F +Y+D++ K+        +   HE  NERWE+    S+  FQQVSFVN IAT KGG H
Sbjct: 251  NFKDYIDLHIKNQDDDAGQPIKIVHEVANERWEVACCPSDRGFQQVSFVNSIATTKGGRH 310

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD+V + V   ++ V+ KKNK   N+K   V+NHLW+FVN LI+NP FDSQTKE +TL+ 
Sbjct: 311  VDHVVDSVIKQLIEVLKKKNKGGINIKPFQVRNHLWIFVNCLIENPTFDSQTKENMTLQA 370

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
             SFGSKC LSE+F+  ++ KSGIVE++L+WA FK   D+ K  G K+  ++GI KLEDAN
Sbjct: 371  KSFGSKCALSEKFISNMS-KSGIVESVLAWAKFKAQNDIAKTGGRKSSKIKGIPKLEDAN 429

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AGG+NS  CTLILTEGDSAK+LA++GL V+GR+ +GVFPLRGKLLNVREA+  Q+  N+
Sbjct: 430  EAGGKNSINCTLILTEGDSAKSLAVSGLGVIGRNFYGVFPLRGKLLNVREANFKQLSENA 489

Query: 497  EIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            EI N+ KI+GL+   +Y   +++K+LRYG +MIMTDQ                       
Sbjct: 490  EINNLCKIIGLQYKKKYLTEDDLKTLRYGKVMIMTDQ----------------------- 526

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
                 D DGSHIKGLLINFIH+ WP LL++P FL EFITPIVKAT KN ++ SFYS+P++
Sbjct: 527  -----DQDGSHIKGLLINFIHTNWPELLRLP-FLEEFITPIVKATKKNEEI-SFYSLPEF 579

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
            E WK     N  +++IKYYKGLGTSTSKE KEYFQ++  H+  F ++   D E+I +AFS
Sbjct: 580  EEWKIDTP-NHHTYNIKYYKGLGTSTSKEAKEYFQDMERHRILFKYDGSVDDESIVMAFS 638

Query: 674  KKKIEARKKWLLQFEPGNHLDQ----KE-------------KYIKYSDFVNKELILFSMA 716
            +K IE+RK WL      NH+D+    KE             K+I Y+DF+N EL+LFS A
Sbjct: 639  RKHIESRKVWLT-----NHMDEVKRRKELGLPERYLYTKGTKHITYADFINLELVLFSNA 693

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D +RSIPS+VDGLKPGQRK++F  FKRN  +E KVAQ SG V+E SAYHHGE SL  TI+
Sbjct: 694  DNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIV 753

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQ++VGSNNINLL+P GQFGTR  GGKD ASARYIFT +SP+TR +F   DD LL+Y 
Sbjct: 754  NLAQNYVGSNNINLLEPRGQFGTRLTGGKDCASARYIFTLMSPLTRLIFHPLDDPLLEYQ 813

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +DGQ+IEP WY+PIIP VLVNG+EGIGTGW++ I N+NPR+I+ N+RR++N E    MH
Sbjct: 814  TDDGQRIEPLWYLPIIPMVLVNGAEGIGTGWATKIANHNPREIMKNLRRMINSEEPVAMH 873

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIID 955
            PWY+ F G +E  +       Y  TG I+ +    + I ELP+  WTQ+Y+E  LE++ +
Sbjct: 874  PWYKNFAGRMEYVSDGR----YVHTGNIQILPGDRVEITELPVGVWTQNYKENVLEALAN 929

Query: 956  QND---SFIRGFRQYSDDTTVDFEVFLS--EESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
              +   + +  +R+Y  DTTV F V  +  E + +R++  G  + FKLT+++ST+ MH F
Sbjct: 930  GTEKVKAVVSEYREYHTDTTVRFVVSFAPGEFNRIRSEDGGFYRVFKLTSSLSTNQMHAF 989

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    ++++ T   +L+EF+ +RLE+Y +RK   +  L  +  +L ++ RFIL      +
Sbjct: 990  DQNNCLRRFPTTMDVLKEFYKLRLEYYARRKDYLVGQLTAQADRLSDQARFILEKCEKTL 1049

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP-------------------KNSKSIEAVVAGATDETE 1111
            VV N++R  +  EL ++G+ P P                   ++ ++ EA  + ++   +
Sbjct: 1050 VVENKQRKAMCDELVKRGYRPDPVKEWQRRIKMEDAEQENDDEDEEAEEAAPSASSKVKK 1109

Query: 1112 ESEENPE-VVNGVQSI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPE 1167
            E + +PE     +  +  +DYLL M++  LT EK   LL  RD    E+++LRK TPE
Sbjct: 1110 EKDADPEKAFKKLTDVKKFDYLLGMSMWMLTEEKKNELLKQRDAKLAELENLRKKTPE 1167


>gi|38453809|dbj|BAD02205.1| DNA topoisomerase II [Trichophyton interdigitale]
          Length = 1089

 Score = 1142 bits (2954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 588/1130 (52%), Positives = 784/1130 (69%), Gaps = 64/1130 (5%)

Query: 33   KKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAAD 92
            K +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNAAD
Sbjct: 1    KITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNAAD 60

Query: 93   NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN 152
            NKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D 
Sbjct: 61   NKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEQIYIPELIFGHLLTSSNYNDM 120

Query: 153  VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM    +  I++CK GD+
Sbjct: 121  QEKVTGGRNGYGAKLCNIFSNEFTVETADSKQKKKFKLTWTNNMSTMGKAKITECK-GDD 179

Query: 213  WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            +TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+P+KSF +Y++
Sbjct: 180  YTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTAVK--LNGTRIPIKSFKKYME 237

Query: 273  MYPKSVTR---------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            MY K++                   E  + RWEI  T+S+G FQQVSFVN IAT  GGTH
Sbjct: 238  MYTKAIKAERGEDPTSASDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTH 297

Query: 318  VDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT R 
Sbjct: 298  VNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNSQIVNPAFTSQTKEQLTTRA 357

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN
Sbjct: 358  SQFGSKCVVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDAN 415

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+
Sbjct: 416  KAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNA 475

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI NIK  +GL+   EY + + LRYGHLMIMTDQ                          
Sbjct: 476  EIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ-------------------------- 509

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPD 612
              DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    N K      SF+++P+
Sbjct: 510  --DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGNPKNPTHTKSFFTLPE 567

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            YE WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAF
Sbjct: 568  YEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAF 626

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            SKKK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPG
Sbjct: 627  SKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINKELILFSMADNIRSIPSVVDGLKPG 686

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+
Sbjct: 687  QRKVLYTMFKRNVRKDVKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLE 746

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P+G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++
Sbjct: 747  PSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNIDDGKVIEPETYVPVV 806

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ GE + PM PW+RGF G  E T S 
Sbjct: 807  PLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMAGEELVPMKPWFRGFKG--EVTGS- 863

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDD 970
              G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  
Sbjct: 864  --GDRYKFSGIIKQTADNEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYNTH 921

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            T V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  F+
Sbjct: 922  TDVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRAFY 981

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++KGF 
Sbjct: 982  AVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQELQEKGFK 1041

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID-YDYLLSMAIGTL 1139
            PFPK   + E   AG  D  EE +E  E      S D YDYLLSM + +L
Sbjct: 1042 PFPKVVGTPEPGEAG--DVEEEEDEEEETTTAAASSDAYDYLLSMPLWSL 1089


>gi|452000834|gb|EMD93294.1| hypothetical protein COCHEDRAFT_1192655 [Cochliobolus heterostrophus
            C5]
          Length = 1631

 Score = 1142 bits (2954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 590/1173 (50%), Positives = 784/1173 (66%), Gaps = 67/1173 (5%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQ  + LEHI+ RPDTYIGS+E+ T  +W+Y  E+++M +R +SYVPGLYKIFDEILVNA
Sbjct: 62   YQMLTHLEHIMKRPDTYIGSVERQTDKMWVYNSEAESMEYRDVSYVPGLYKIFDEILVNA 121

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ D  M  ++V +D+E   IS+ N G G+P+EIH+E G+YVPE+IFGHLLTSSNYD
Sbjct: 122  ADNKQNDKNMSEIRVTVDRESGEISIRNDGKGIPIEIHKEHGIYVPEMIFGHLLTSSNYD 181

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ +K TGGRNGYGAKL N+FSTEF +ET D K+ KKYKQ +T NM K  +  I+  K  
Sbjct: 182  DDQQKVTGGRNGYGAKLCNVFSTEFTVETVDSKQKKKYKQTWTENMSKMGKAKITDIK-A 240

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++TKVS+K D A+F M  ++DD  A++K+R  D+AG L + VKV LNG R+ + SFA+Y
Sbjct: 241  DDYTKVSWKADYARFGMEGIDDDFEAMVKRRTYDMAGTL-RGVKVYLNGERIKITSFAKY 299

Query: 271  VDMYPKSVTRFHERVN-------------ERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++MY KS++R                   ERW+I   +S+G F QVSFVN IAT  GGTH
Sbjct: 300  MEMYTKSISRDQGNSEDDKEKDVIITDKLERWDIGFAVSDGAFNQVSFVNSIATTSGGTH 359

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+++A+Q+   +MA+VNKKNK A  +K   +KNHL++FVN  I NPAF SQTKE LT + 
Sbjct: 360  VNHIADQIVEKLMAIVNKKNKAAVKLKPAQIKNHLFLFVNCSIVNPAFTSQTKEQLTTKP 419

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSK  LS++FL  + AK+ +++ ++ +A  K  + +KK DG K   +   +KL DAN
Sbjct: 420  SQFGSKPVLSDKFLNAI-AKTDVIQNIMHFAQQKADQMMKKTDGNKRNRINN-AKLTDAN 477

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG ++   CTLILTEG+SA  LA+AG +VV +D FGVFPLRGKLLNVR+A+ +Q++ N 
Sbjct: 478  KAGTKDGHLCTLILTEGESASVLALAGRAVVNQDLFGVFPLRGKLLNVRDATVDQIMKNV 537

Query: 497  EIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
            EI NIKK +GL+   EY   ++KSLRYGHLMIMTDQ                        
Sbjct: 538  EIQNIKKFMGLQHKKEYTVADMKSLRYGHLMIMTDQ------------------------ 573

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---ATNKNGKVL-SFYSM 610
                DHDGSHIKGLLINF+   +PSLLKIP FL+EFITPIVK      KN + + SF+SM
Sbjct: 574  ----DHDGSHIKGLLINFLQCQFPSLLKIPGFLLEFITPIVKVWKGDQKNPRNMKSFFSM 629

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+YE WKE    +   W  KY+KGLGTS   + + YF+++  H K F    +++ + IEL
Sbjct: 630  PEYEEWKEQ-HAHEKGWDHKYFKGLGTSDIPDAQIYFKDLDTHMKRFQVMREEEEKLIEL 688

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AFSKKK +ARK WL  F PG HLD     I Y DFVNKELILFSMAD  RSIPS+VDGLK
Sbjct: 689  AFSKKKADARKDWLRDFVPGRHLDLTTPDISYDDFVNKELILFSMADNVRSIPSVVDGLK 748

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+++  F+RN  K+ KV + +G VS  + Y HGE S+  TI+G+AQ+FVG+NNIN 
Sbjct: 749  PGQRKVMYTCFRRNIKKDVKVVELAGAVSGSTDYAHGEASMQGTIVGLAQNFVGTNNINF 808

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+P+G FG+R +GG DAASARYI+TRL+P  R +F   DD LL Y   DG +IEP  Y+P
Sbjct: 809  LEPSGNFGSRLKGGADAASARYIYTRLTPFARRIFHPHDDALLKYGESDGNKIEPEMYVP 868

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL----NGEMMEPMHPWYRGFGGTI 906
            I+PT+L+NGS GIGTGWSS IPN+NP DI+ N+RR +      E M PM PWY+GF GT 
Sbjct: 869  ILPTILINGSSGIGTGWSSEIPNFNPMDIIENIRRRMQPGATKEDMTPMVPWYKGFTGTT 928

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGF 964
                       Y  TG + +  +  + I ELP+R WTQD++E LE II  ++  SFI+ +
Sbjct: 929  TVLGPDR----YQFTGTVRQTGDNEIEITELPVRYWTQDFKEKLEEIIKAEKGPSFIKDY 984

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
              Y+    V F + + ++ M     +GL + FKL    +TSN+  FD++G I KY T   
Sbjct: 985  IDYNTPDRVHFVIKMEDKHMATALAKGLEEMFKLYKPQATSNLVAFDAQGRIHKYSTVLD 1044

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            I+EEF+HIRL +YEKRK+ QL+ LE ELLKL N+ +FI  +++G+  V+ +K+  L+ EL
Sbjct: 1045 IIEEFYHIRLRYYEKRKQHQLQVLEKELLKLTNQAKFIQMIIDGKFTVSKKKKAVLVQEL 1104

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            ++ GF P    +K  +A  AG  ++ +E E +   V  V + DYDYLL MAI +LT E+V
Sbjct: 1105 KKLGFAPI---NKVEDAKTAGEEEDAQEDESDEAEVE-VSANDYDYLLGMAIWSLTQERV 1160

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            + LL    +   EVD L K +P+ +W  DLDA 
Sbjct: 1161 EKLLKQIGEKQAEVDTLIKLSPKDIWNVDLDAF 1193


>gi|296418623|ref|XP_002838930.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634913|emb|CAZ83121.1| unnamed protein product [Tuber melanosporum]
          Length = 1612

 Score = 1142 bits (2953), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/1199 (49%), Positives = 802/1199 (66%), Gaps = 99/1199 (8%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K+  + YQK +QLEHIL RPDTY+GS+E+  + +W+++  + +M+ + ++ VPGLYKIFD
Sbjct: 48   KSFADAYQKLTQLEHILKRPDTYVGSVERSERHMWVFDSGTTSMVWKPVTMVPGLYKIFD 107

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDPKMD +KV +D+  + ISV+N+G G+P+EIH +E VYVPELIFGHLL
Sbjct: 108  EILVNAADNKIRDPKMDTLKVTVDKATNTISVYNNGRGIPIEIHSKEKVYVPELIFGHLL 167

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ KK TGGRNGYGAKL NIFSTEF +ET D    +KYKQ +T+NMGK  +  I
Sbjct: 168  TSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFTVETGDKNTKQKYKQTWTDNMGKMGKAKI 227

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +   +G+ +TK++FKPDLAKF+M  ++DD  AL+K+RV D+A  + K VKV LNG R+ +
Sbjct: 228  TANPKGEQFTKITFKPDLAKFHMEEMDDDFEALVKRRVYDMAASV-KDVKVFLNGERIKL 286

Query: 265  KSFAEYVDMYPKSVTRFHER-------------VNERWEICVTLSEGQFQQVSFVNGIAT 311
             +F +Y +MY   V   HE              VN+RWE+    S G FQQVSFVN IAT
Sbjct: 287  -NFRKYCEMY---VNALHEEAGCEEKLVITWEVVNDRWEVAFAASGGNFQQVSFVNSIAT 342

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
              GGTHV+Y+A+Q+  H+   + K+NK+ A VK   ++NH ++FVN LI+NPAF SQTKE
Sbjct: 343  TSGGTHVNYIADQLCTHLQGALKKQNKSGAAVKNAQMRNHFFIFVNCLIENPAFTSQTKE 402

Query: 371  TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGIS 430
             LT R  +FGSKC LS+ F+K +   + ++  ++ +AN K  K LKK DG++   +    
Sbjct: 403  QLTTRAGAFGSKCALSDTFIKNILKNTPVISNIIDYANMKADKQLKKTDGSRRSRINN-P 461

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV-GRDRFGVFPLRGKLLNVREASS 489
            KL DAN AG ++S++C LILTEGDSA++LA+AG+S + GRDRFGVFPLRGKLLNVR+AS 
Sbjct: 462  KLIDANRAGTKDSQECVLILTEGDSARSLAVAGISAIDGRDRFGVFPLRGKLLNVRDASH 521

Query: 490  NQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
            +Q++ N+EI NIK+ILGL+    Y + K LRYGHLMIMTDQ                   
Sbjct: 522  DQIMKNAEIQNIKQILGLQHKKVYESRKELRYGHLMIMTDQ------------------- 562

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYS 609
                     D+DGSHIKGLLINF  + +PSLL                        +F++
Sbjct: 563  ---------DYDGSHIKGLLINFFETQFPSLL------------------------NFFT 589

Query: 610  MPDYEAWKESLGGNAS-SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAI 668
            MP+YE WKE+   NA   W  KYYKGLGTS  ++ K YF ++  H K+F   + +    I
Sbjct: 590  MPEYEYWKEN---NAEKGWEHKYYKGLGTSGERDAKLYFSDLERHVKEFHVMEAEGQRLI 646

Query: 669  ELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
            ELAFSKKK + RK+WL  ++PG +LD     I Y +FVNKELILFSMAD  RSIPS+VDG
Sbjct: 647  ELAFSKKKADERKEWLRLYKPGTYLDHSIDKISYPEFVNKELILFSMADNIRSIPSVVDG 706

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKPGQRKILF  FKR   K+ KV++ SG+VSE +AY HGE SL  TI GMAQ FVGSNN+
Sbjct: 707  LKPGQRKILFACFKRKLTKQLKVSELSGFVSECTAYQHGESSLQVTITGMAQTFVGSNNV 766

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            NLL+P G FGTR  GGKDAAS RYI+T LSP  R LFP  DD LL Y  +D ++IEP WY
Sbjct: 767  NLLEPEGSFGTRLDGGKDAASPRYIYTLLSPFARKLFPATDDPLLTYNLDDDKKIEPMWY 826

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
             P++P VL+NG++GIGTGWS+ IPNYNP D+VAN+RRL+N E +EPM PWYR + G +E+
Sbjct: 827  APVVPLVLINGADGIGTGWSTTIPNYNPEDVVANIRRLMNNEELEPMTPWYRDWAGKVEQ 886

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYS 968
             A  +    +  +G+I +++  T  ++ELPI+ WTQ+++E LE II    SF++ +  Y+
Sbjct: 887  VAVDK----FKFSGVINQIDGVTCEVRELPIKMWTQEFKEKLEEIIKGEKSFVKDYVDYN 942

Query: 969  DDTTVDFEVFL-SEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILE 1027
                V F + + SE+ M     EGL+ +FKLT TI+TSN+  FD +G I KY +   IL+
Sbjct: 943  SPRRVHFIITMESEKHMQEALAEGLVNRFKLTKTIATSNLVAFDPEGRINKYASVNDILK 1002

Query: 1028 EFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK 1087
            EF++IRL++Y++RK   L+ +  +L+K  N+ RF+  ++  E+ V+ RKR++++ +L +K
Sbjct: 1003 EFYYIRLKYYQERKDNMLKEMSKQLMKYTNQARFVQMIIKKELAVSGRKRSEIIEDLVKK 1062

Query: 1088 GFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGL 1147
             F    K S   EA  AG T++T E E++  V +G     Y+YLL MAI +LT EKVQ L
Sbjct: 1063 KFD---KISNKAEAQKAGETEDTVEEEDS-TVGDG-----YNYLLGMAIWSLTHEKVQKL 1113

Query: 1148 LADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDELDKSDARAEEERMKIKGNG 1202
            L D      EVD+L K +P+ LW  +LDA      +QL+E    D + +   +K K NG
Sbjct: 1114 LQDVADKELEVDELIKKSPKDLWNTELDAFIEEWRIQLEE----DKKEQGTVVKRKKNG 1168


>gi|154297045|ref|XP_001548951.1| hypothetical protein BC1G_12611 [Botryotinia fuckeliana B05.10]
 gi|347838482|emb|CCD53054.1| hypothetical protein [Botryotinia fuckeliana]
          Length = 1823

 Score = 1142 bits (2953), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 583/1194 (48%), Positives = 795/1194 (66%), Gaps = 70/1194 (5%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT  E YQK +QLEHI+ RPDTYIGS+EK  Q +W++  E+K M  R +++VPGLYKIFD
Sbjct: 145  KTSTEQYQKLTQLEHIIKRPDTYIGSVEKTEQTMWVFNSENKEMELRKVTFVPGLYKIFD 204

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EI+VNAADNKQ D  M  +KVV+D+E   ISV N G G+PVEIH++E +Y+PE+IFGHLL
Sbjct: 205  EIMVNAADNKQNDANMKNIKVVVDREKGEISVENDGRGIPVEIHEKEKIYIPEMIFGHLL 264

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            T SNYDD+  KTTGGRNGYGAKL NIFSTEF +ET D    K+YKQ +T+NM K  +  I
Sbjct: 265  TGSNYDDDEAKTTGGRNGYGAKLCNIFSTEFTLETQDSNSGKRYKQTWTDNMSKMGKARI 324

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            S  K  D +T+V+F PD  KF MT ++DD  A++K+RV D+AG + K VKV LNG ++ +
Sbjct: 325  SSSKNAD-FTRVTFTPDWTKFKMTGIDDDFEAMVKRRVYDMAGTV-KGVKVYLNGAQIKL 382

Query: 265  KSFAEYVDMYPKSVTRFH--------------ERVNERWEICVTLSEGQFQQVSFVNGIA 310
              F +Y++MY K++ +                 + + +WE+   +S+G FQQVSFVN IA
Sbjct: 383  -DFKKYIEMYAKAINKERGLDDASANSVIVEDSKGHPKWEVGFAVSDGSFQQVSFVNSIA 441

Query: 311  TIKGGTHVDYVANQVANHVMAVVNKKN-KNANVKAHNVKNHLWVFVNALIDNPAFDSQTK 369
            T  GGTHV+Y+A+Q+ + ++ VV K+N K A +KA+ V+NH+++FVN LI NPAF SQTK
Sbjct: 442  TTSGGTHVNYIADQICDKLLEVVKKRNPKGALLKANQVRNHIFLFVNCLITNPAFTSQTK 501

Query: 370  ETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGI 429
            E LT R+  FGSKC L+EEFLKK+  K+  VE +L++A  K   +L K+DG +   +   
Sbjct: 502  EQLTTRKPQFGSKCVLTEEFLKKI-GKTEAVENILNFAAKKADLELAKSDGNRRSRMNN- 559

Query: 430  SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS 489
             KL DANLAG +   +CTLILTEGDSAK LA+AG +V+  DR GVFPLRGKLLNVR+AS 
Sbjct: 560  PKLVDANLAGTKRGHECTLILTEGDSAKGLAVAGRAVLDPDRIGVFPLRGKLLNVRDASH 619

Query: 490  NQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
            +Q+  N+EI NIK+ LGLK    Y +   LRYGHLMIM DQ                   
Sbjct: 620  DQIAKNAEIQNIKQFLGLKHKTTYKDTLGLRYGHLMIMADQ------------------- 660

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA-----TNKNGKV 604
                     DHDGSHIKGLLINF+   +PSLLK+P F  EFITPIVK       NK   +
Sbjct: 661  ---------DHDGSHIKGLLINFLQVQYPSLLKLPEFFREFITPIVKVWKGPNPNKPTNL 711

Query: 605  LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD 664
             SF++MP+YE WKES   N  SW  KYYKGLGTS  ++ + YF N+ +H ++F     ++
Sbjct: 712  RSFFTMPEYEEWKES-NNNDKSWKHKYYKGLGTSKPEDAQIYFSNLDVHLREFETIKPEE 770

Query: 665  GEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPS 724
             E ++LAFSKKK ++RK WL  F PG +LD  +K + Y +F+NKELILFSMAD  RSIPS
Sbjct: 771  EEMLDLAFSKKKADSRKTWLGNFIPGTYLDHTDKMLTYDNFINKELILFSMADNMRSIPS 830

Query: 725  MVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVG 784
            ++DGLKPGQRK+++  FKRN I + KV + +GYVS+ SAYHHGE S+  TI+G+AQ+FVG
Sbjct: 831  VIDGLKPGQRKVMYACFKRNLINDMKVVELAGYVSQISAYHHGEASMQMTIVGLAQNFVG 890

Query: 785  SNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIE 844
            SNN+N L+P+G FG+R QGG D+ASARYIFTRLSP  R ++   DD +L+Y  +DG+ IE
Sbjct: 891  SNNVNCLEPSGNFGSRLQGGSDSASARYIFTRLSPFARRVYSALDDPVLEYNIDDGKSIE 950

Query: 845  PTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL-----NGE--MMEPMHP 897
            P  Y P++P VL+NG+EGIGTGWS+ IPNY+P ++V N++R +     +GE    E M P
Sbjct: 951  PVTYFPVVPMVLINGAEGIGTGWSTNIPNYHPVEVVNNLKRRMGRLDDSGEEKPFETMMP 1010

Query: 898  WYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--D 955
            W+RG+ GT E          Y   GII E  +T + I ELPIR WT D++  LE +I  +
Sbjct: 1011 WFRGWKGTPEPAGPDR----YKFNGIIRETGDTEVEITELPIRMWTDDFKAKLEEVIKAE 1066

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  SFI+ +++++D   V   + + ++ M    +EGL +KFKL  T++TSN+  FD +G 
Sbjct: 1067 KVPSFIKDYKEFNDHKNVHMIIQMDDKHMKEALKEGLAEKFKLNKTVATSNLVAFDHRGQ 1126

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            I+KYD  E ILEEF+  RL+ Y  RK   ++ L +E  KL N+ RF+  ++  +++V+ +
Sbjct: 1127 IRKYDKVEDILEEFYEQRLKMYTVRKAHWMKKLNVEYRKLTNQARFVTEIIENKLIVSKK 1186

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMA 1135
            K+  L+ ELR++G+  FPK +   +A  AG  D+  E+EE         + DYDYLL + 
Sbjct: 1187 KKPVLVAELRKRGYEGFPKIT---DAKKAGEADDVVENEEEVTADEDAGARDYDYLLGLP 1243

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            I +LT E+V  L        +E+D L + + + LW +DLDA  ++ ++  + DA
Sbjct: 1244 IWSLTQERVDKLNKQMYDKKDEIDTLDRLSEKDLWCEDLDAFVLEWEDQLRQDA 1297


>gi|340505648|gb|EGR31961.1| topoisomerase ii beta 180kda, putative [Ichthyophthirius multifiliis]
          Length = 1481

 Score = 1142 bits (2953), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/1190 (49%), Positives = 806/1190 (67%), Gaps = 54/1190 (4%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE  YQKK+QLEHILLRPDTY+GS+++ TQ LW+  ++ ++  +R I+YVP LYKIFDE
Sbjct: 3    SIEHTYQKKTQLEHILLRPDTYVGSVQQQTQQLWVLSKDGQSFENRNITYVPALYKIFDE 62

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNA+DN QRD +M  + V ID E ++IS++N G  +PV+IH++  VYV E+IFG LLT
Sbjct: 63   ILVNASDNYQRDKRMKKLDVTIDNEKNIISIYNDGASIPVQIHKQYNVYVSEMIFGQLLT 122

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKLTNIFS +F IETAD K   K    ++ NM ++ EP I+
Sbjct: 123  SSNYNDHEKKVTGGRNGYGAKLTNIFSKKFSIETADSKNKLKLTMTWSKNMQEREEPKIT 182

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K  E D +T++SF+PDL +F+M  L+DD++ LMKKRV D+AG +G SV+V LNG ++ + 
Sbjct: 183  KYTEAD-YTRISFEPDLKRFHMQKLDDDILDLMKKRVYDMAGIIGGSVRVFLNGKKIEIN 241

Query: 266  SFAEYVDMYPKSVTRFHERV-----------NERWEICVTLSEGQFQQVSFVNGIATIKG 314
            +F+EY D Y K+      R            NERWEI  ++SEGQFQQVSFVN I T KG
Sbjct: 242  NFSEYCDFYLKNSDYNESREIIKVADNKNTNNERWEIIASVSEGQFQQVSFVNSICTTKG 301

Query: 315  GTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            GTHV+Y+ +Q+   ++  +  K K ++N+K   +KNH+W+F+NALI+NP+FDSQTKETLT
Sbjct: 302  GTHVNYITDQLCERLLEKLKSKQKGSSNIKQFQIKNHIWIFINALIENPSFDSQTKETLT 361

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN-DGTKTEDVRGISKL 432
            L+Q  FGS+C +SE+FLK    K+GI+E +L     K+   +KK     K   + GI KL
Sbjct: 362  LKQQDFGSQCIVSEKFLKDY-LKTGILENILVQIKAKEQAKMKKALSSNKQSRLLGIPKL 420

Query: 433  EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
            EDAN AG R  +QCTL +TEGDSAKALAM+G+ VVGRD+FGVFPL+GK+LNVREAS  Q+
Sbjct: 421  EDANDAGTRLGDQCTLFVTEGDSAKALAMSGIEVVGRDKFGVFPLKGKMLNVREASVKQI 480

Query: 493  LNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              N EI NI KI+GLK G +Y N KSLRYG + IM DQ                      
Sbjct: 481  TENQEIQNIIKIMGLKLGAKYENTKSLRYGSIAIMADQ---------------------- 518

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  DHDGSHIKGL INFI +FWPSL ++  FL EF+TPIVK   K  + LSF+S+ D
Sbjct: 519  ------DHDGSHIKGLFINFIQNFWPSLFEMKGFLKEFVTPIVKVR-KGEQSLSFFSLHD 571

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            ++ WK SLG N++ W  KYYKGLGTST  E +EYFQN+  H   F + +D+D E+I+LAF
Sbjct: 572  FKKWKNSLGDNSNQWKTKYYKGLGTSTDMEAREYFQNVEKHMISFTYLNDEDEESIDLAF 631

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            +KKK +ARK+WL  F   +++D  +K ++Y DFV+KELI FS++D  RSIP++ DGLK G
Sbjct: 632  NKKKADARKEWLNAFNEDDNVDHTQKNLRYKDFVHKELINFSISDNARSIPNICDGLKTG 691

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRKILF  FKRN  +E KVAQ SGYV+EHSAYHHGEQSLA TI GMAQ+FVGSNNINLL 
Sbjct: 692  QRKILFACFKRNLKQEIKVAQLSGYVAEHSAYHHGEQSLAQTITGMAQNFVGSNNINLLM 751

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P GQFG+RN GGK+AASARYI T L+ ITR +FP++DD +L YL +DG  +EP +Y+PII
Sbjct: 752  PIGQFGSRNMGGKEAASARYIHTNLNKITRVIFPQNDDYILQYLEDDGYLVEPKYYLPII 811

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P VLVNG+EGIGTGWS+ IP YNPR+IV ++++ + GE  E + PWY+G+ G IE     
Sbjct: 812  PMVLVNGAEGIGTGWSTSIPQYNPREIVQSIQKRMEGENWEQLIPWYKGYQGEIENNDKG 871

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN---DSFIRGFRQYSD 969
            +    Y V G    + E  + I ELPI++WT+D++ FLE  ++ +   +  I   ++Y  
Sbjct: 872  Q----YNVKGRASIIGENLVEITELPIKKWTRDFKNFLEEKMESSKDKEQEIEDIKEYHT 927

Query: 970  DTTVDFEVFLSEESMMRTKQEGLLKK-FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
               V FEV +    + +  +EG L K FKL ++ISTSNM LF+ +G I KY+  ++I+E+
Sbjct: 928  GNNVRFEVKMVNGMLDKILKEGGLDKYFKLVSSISTSNMVLFNHEGKIVKYNNIQEIMED 987

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ +RL+ Y++RK+     +  +L  L NK RFIL V+  ++ + N K+ ++L +L    
Sbjct: 988  FYKLRLDLYKQRKEFLASKILRDLEILNNKKRFILSVIEEKLDIKNTKKKEILKQLVALR 1047

Query: 1089 FTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI-DYDYLLSMAIGTLTLEKVQGL 1147
            F    +N   I+       ++  + EEN E      +  +++YLL M I  L+ EK++ +
Sbjct: 1048 FVEM-RNMPKIKQSNKFLNEKLNQDEENSEFQEEETTFKEFNYLLQMPIWNLSYEKIEEI 1106

Query: 1148 LADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMK 1197
                ++  +E+ ++ K   + +W  DL+     L+E+++++   ++ER K
Sbjct: 1107 KNQCEQKEKELAEILKKDVKDIWKDDLNEFVNVLNEIEENEDIEKQERFK 1156


>gi|350401441|ref|XP_003486153.1| PREDICTED: DNA topoisomerase 2-like [Bombus impatiens]
          Length = 1502

 Score = 1141 bits (2951), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1198 (49%), Positives = 798/1198 (66%), Gaps = 83/1198 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIE +YQKKSQLEHILLRPDTYIGS+E  T+ +WIY++E ++M+ + I YVPGLYKIFD
Sbjct: 17   KTIEGIYQKKSQLEHILLRPDTYIGSVEPMTEMMWIYDKEKESMVQKEIKYVPGLYKIFD 76

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDPKMD +K+ ID ++++ISV N+G G+PV IH+EE +YVP +IFGHLL
Sbjct: 77   EILVNAADNKQRDPKMDTIKIEIDPKNNVISVWNNGKGIPVVIHKEENMYVPTMIFGHLL 136

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD  +K TGGRNGYGAKL NIFS  F +ETA  +  K  KQ + NNMG  SEP I
Sbjct: 137  TSSNYDDEEEKVTGGRNGYGAKLCNIFSHRFTVETASKEYKKCLKQTWNNNMGIASEPRI 196

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
             K   G+++TKV F PDL+KF M  L+DD+VALM +R  D+A    + VKV LNG ++PV
Sbjct: 197  -KDFSGEDFTKVIFSPDLSKFKMQSLDDDIVALMSRRAYDVAAST-RGVKVYLNGTKIPV 254

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            K+F +YVD Y K         +   +E    RWE+ V LS+  +Q +SFVN IAT KGG 
Sbjct: 255  KNFKDYVDFYIKGREDESGNPLKVVYENCGARWEVAVALSDKGYQHMSFVNSIATTKGGR 314

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVD+V   +   +   + KKNK    +K   +KNHLW+FVN LI+NP FDSQTKE +TL+
Sbjct: 315  HVDHVTELIVKQLTETLKKKNKAGVAIKPFQIKNHLWIFVNCLINNPTFDSQTKENMTLQ 374

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK-NDGTKTEDVRGISKLED 434
              SFGSKC LSE+F+  VT K GIVE +L+WA FK    L+K    +K   ++GI KLED
Sbjct: 375  PKSFGSKCTLSEKFITTVT-KIGIVEAVLTWAKFKADSQLQKLGPKSKQRKLQGIPKLED 433

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG   S +CTLILTEGDSAK +A++GL+ +GRD++G+FPLRGK+LNVREA+  Q+L 
Sbjct: 434  ANDAGTNKSLECTLILTEGDSAKTMAVSGLAAIGRDKYGIFPLRGKILNVREATHKQILE 493

Query: 495  NSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI N+ KILGL+   +Y    ++K+LRYG +MIMTDQ                     
Sbjct: 494  NAEINNLIKILGLQYKKKYETREDLKTLRYGKMMIMTDQ--------------------- 532

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGLLINFIH  WPSLLK+ +F+ EFITPIVKA+ K  ++LSF+SMP
Sbjct: 533  -------DQDGSHIKGLLINFIHHNWPSLLKL-NFVEEFITPIVKAS-KGNQILSFFSMP 583

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK S   N  ++ IKYYKGLGTST+KE KEYF+N+T H+  F ++ DQD + I +A
Sbjct: 584  EFQKWK-SETENFHTYKIKYYKGLGTSTAKEAKEYFENMTRHRIRFRYDGDQDDQNIIMA 642

Query: 672  FSKKKIEARKKWLLQFEPGNHLDQKEK-----------------YIKYSDFVNKELILFS 714
            FSKK ++ RK WL+     NH+D+ ++                  + +SDF+N EL+L+S
Sbjct: 643  FSKKCVDQRKDWLM-----NHMDETKRRKEIGLGERFLYEKDTRTVSFSDFINVELVLYS 697

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
              D  RSIP+M+DG KPGQRK+L+   KRN  +E KVAQ +G V+EHSAYHHGE SL ST
Sbjct: 698  NYDNVRSIPNMIDGFKPGQRKVLYTCLKRNDKREVKVAQLAGSVAEHSAYHHGEVSLMST 757

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LSP+ R++F K DD LL 
Sbjct: 758  IINLAQNFVGSNNINLLQPIGQFGTRLAGGKDAASPRYIFTMLSPLARYIFHKHDDPLLK 817

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            +  +D Q+IEP +Y+P IP VLVNG++GIGTGW + IPNYNPR+I+ N+ R+++G   +P
Sbjct: 818  HEYDDNQKIEPVFYVPTIPMVLVNGADGIGTGWMTKIPNYNPREIIENLYRMMDGADPKP 877

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESI 953
            M P+Y+ F G IE          Y + G I  +    + I ELP+  WTQ Y+E  LE +
Sbjct: 878  MVPYYKNFKGVIESCGD----YRYVINGEISVIAPDKVEITELPVGTWTQTYKETVLEPM 933

Query: 954  IDQND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
            +   +   + I  +++Y+ DT V F + ++ + ++  +++GL K FKL TT + ++M  F
Sbjct: 934  LHGTEKIPAIITDYKEYNTDTAVHFIIMINRDKLVELERDGLHKAFKLQTTTTVTSMCAF 993

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    ++KYD+  QIL+ F+ +RLE Y KRK+     L+ E  KL N+ RFIL   +G I
Sbjct: 994  DENLCLQKYDSVLQILKGFYKVRLETYHKRKEYLEGILQAEASKLSNQARFILEKCDGTI 1053

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEESEENPEVVNGVQSI 1126
            V+ N+KR D++ EL ++ +   P    K S++ E V+    +   E         G +  
Sbjct: 1054 VIENKKRKDMIAELIRREYESDPVLAWKLSQNREEVLEEVAENVNEESATSSTAIGKE-- 1111

Query: 1127 DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL 1184
            ++DYLL M +  LT EK   LL  +D    E+  L+  TP SLW +DLD L  +L+ L
Sbjct: 1112 NFDYLLGMTLWCLTKEKKDELLRQKDDKLAELKRLQARTPISLWKEDLDNLLNELNRL 1169


>gi|38453811|dbj|BAD02206.1| DNA topoisomerase II [Trichophyton quinckeanum]
          Length = 1089

 Score = 1140 bits (2950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/1130 (51%), Positives = 784/1130 (69%), Gaps = 64/1130 (5%)

Query: 33   KKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAAD 92
            K +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNAAD
Sbjct: 1    KITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNAAD 60

Query: 93   NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN 152
            NKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D 
Sbjct: 61   NKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEQIYIPELIFGHLLTSSNYNDM 120

Query: 153  VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM    +  I++CK GD+
Sbjct: 121  QEKVTGGRNGYGAKLCNIFSNEFTVETADSKQKKKFKLTWTNNMSTMGKAKITECK-GDD 179

Query: 213  WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            +TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+P+KSF +Y++
Sbjct: 180  YTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTAVK--LNGTRIPIKSFKKYME 237

Query: 273  MYPKSVTR---------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            MY K++                   E  + RWEI  T+S+G FQQVSFVN IAT  GGTH
Sbjct: 238  MYTKAIKAERGEDPTSASDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTH 297

Query: 318  VDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT R 
Sbjct: 298  VNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNSQIVNPAFTSQTKEQLTTRT 357

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN
Sbjct: 358  SQFGSKCVVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDAN 415

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+
Sbjct: 416  KAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNA 475

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI NIK  +GL+   EY + + LRYGHLMIMTDQ                          
Sbjct: 476  EIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ-------------------------- 509

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPD 612
              DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++P+
Sbjct: 510  --DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGSPKNPTHTKSFFTLPE 567

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            YE WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAF
Sbjct: 568  YEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAF 626

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            SKKK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPG
Sbjct: 627  SKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINKELILFSMADNIRSIPSVVDGLKPG 686

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+
Sbjct: 687  QRKVLYTMFKRNVRKDVKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLE 746

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P+G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++
Sbjct: 747  PSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNIDDGKVIEPETYVPVV 806

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ GE + PM PW+RGF G  E T S 
Sbjct: 807  PLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMAGEELVPMKPWFRGFKG--EVTGS- 863

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDD 970
              G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  
Sbjct: 864  --GDRYKFSGIIKQTADNEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYNTH 921

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            T V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  F+
Sbjct: 922  TDVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRAFY 981

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++KGF 
Sbjct: 982  AVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQELQEKGFK 1041

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID-YDYLLSMAIGTL 1139
            PFPK   + E   AG  D  EE +E  E      S D YDYLLSM + +L
Sbjct: 1042 PFPKVVGTPEPGEAG--DVEEEEDEEEETTTAAASSDAYDYLLSMPLWSL 1089


>gi|38453817|dbj|BAD02209.1| DNA topoisomerase II [Trichophyton tonsurans]
          Length = 1089

 Score = 1140 bits (2949), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 588/1130 (52%), Positives = 783/1130 (69%), Gaps = 64/1130 (5%)

Query: 33   KKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAAD 92
            K +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNAAD
Sbjct: 1    KITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNAAD 60

Query: 93   NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN 152
            NKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D 
Sbjct: 61   NKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEQIYIPELIFGHLLTSSNYNDM 120

Query: 153  VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM    +  I++CK GD+
Sbjct: 121  QEKVTGGRNGYGAKLCNIFSNEFTVETADSKQKKKFKLTWTNNMSTMGKAKITECK-GDD 179

Query: 213  WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            +TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G SVK  LNG R+P+KSF +Y++
Sbjct: 180  YTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTSVK--LNGTRIPIKSFKKYME 237

Query: 273  MYPKSVTR---------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            MY K++                   E  + RWEI  T+S+G FQQVSFVN IAT  GGTH
Sbjct: 238  MYTKAIKAERGEDSTSASDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTH 297

Query: 318  VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT R 
Sbjct: 298  VNYISDQICNKLADALKKKNKAGATLKAAQIKNHIFLFVNSQIVNPAFTSQTKEQLTTRA 357

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN
Sbjct: 358  SQFGSKCVVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDAN 415

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+
Sbjct: 416  KAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNA 475

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI NIK  +GL+   EY + + LRYGHLMIMTDQ                          
Sbjct: 476  EIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ-------------------------- 509

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPD 612
              DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    N K      SF+++P+
Sbjct: 510  --DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGNPKNPTHTKSFFTLPE 567

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            YE WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAF
Sbjct: 568  YEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAF 626

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            SKKK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPG
Sbjct: 627  SKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINKELILFSMADNIRSIPSVVDGLKPG 686

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+
Sbjct: 687  QRKVLYTMFKRNVRKDVKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLE 746

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P+G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++
Sbjct: 747  PSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNIDDGKVIEPETYVPVV 806

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ GE + PM PW+RGF G  E T S 
Sbjct: 807  PLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMAGEELVPMKPWFRGFKG--EVTGS- 863

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDD 970
              G  Y  +GII++  +  + I ELPI  WTQD+++ LE II  ++  SFI+ ++ Y+  
Sbjct: 864  --GDRYKFSGIIKQTADNEVEITELPICTWTQDFKDKLEEIIKAEKVPSFIKDYKDYNTH 921

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            T V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  F+
Sbjct: 922  TDVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRAFY 981

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++KGF 
Sbjct: 982  AVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQELQEKGFK 1041

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID-YDYLLSMAIGTL 1139
            PFPK   + E   AG  D  EE +E  E      S D YDYLLSM + +L
Sbjct: 1042 PFPKVVGTPEPGEAG--DVEEEEDEEEETTTAAASSDAYDYLLSMPLWSL 1089


>gi|366995499|ref|XP_003677513.1| hypothetical protein NCAS_0G02740 [Naumovozyma castellii CBS 4309]
 gi|342303382|emb|CCC71161.1| hypothetical protein NCAS_0G02740 [Naumovozyma castellii CBS 4309]
          Length = 1412

 Score = 1139 bits (2946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 636/1390 (45%), Positives = 866/1390 (62%), Gaps = 124/1390 (8%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T   K+  E YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  M+ + +  VPGL+
Sbjct: 2    TVAVKSASERYQKISQLEHILKRPDTYIGSVELQEQEQWIYDEETDCMVEKHVKMVPGLF 61

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEI+VNAADNK RDP M  ++V I  E +LI V N G G+P+EIHQ+E +Y+PELIF
Sbjct: 62   KIFDEIIVNAADNKVRDPTMKKIEVTIKPEENLIEVKNDGKGIPIEIHQKEKIYIPELIF 121

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            GHLLTSSNYDDN KK TGGRNGYGAKL NIFSTEF++ETAD K   KY Q +  NM    
Sbjct: 122  GHLLTSSNYDDNEKKVTGGRNGYGAKLCNIFSTEFVLETADPKLGSKYVQKWEKNMSVCH 181

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
             P I+  K+G ++TKVSFKPDL++FNMT L++D++ +M++RV D+ G + + + V LNG 
Sbjct: 182  PPKITSYKKGPSYTKVSFKPDLSRFNMTSLDNDILGVMRRRVYDINGSV-RDISVYLNGK 240

Query: 261  RVPVKSFAEYVDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQ 301
             + +++F  YV++Y KS+                   T  +ERVN  WEI   +S+  FQ
Sbjct: 241  SLKIRNFKNYVELYMKSLEKKKKLDAGEDASDQSNVPTILYERVNASWEIAFAVSDISFQ 300

Query: 302  QVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDN 361
            Q+SFVN IAT  GGTHV+Y+++Q+   V  ++ KK K    K   +KN++++F+N LI+N
Sbjct: 301  QISFVNSIATTSGGTHVNYISDQIVRKVQDLIKKKRKKTI-KPFQIKNNMFIFINCLIEN 359

Query: 362  PAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT 421
            PAF SQTKE LT R   FGSKCE+S E++ K+  K+     +   A+  ++  LKK+DGT
Sbjct: 360  PAFTSQTKEQLTTRVKDFGSKCEVSPEYINKI-MKTDFATKISEIADENEANTLKKSDGT 418

Query: 422  KTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKL 481
            +   +    KLEDAN AG ++  +CTLILTEGDSA +LA+AGL+VVGRD +G +PLRGK+
Sbjct: 419  RKTRITEYPKLEDANKAGTKDGYKCTLILTEGDSALSLAVAGLAVVGRDLYGCYPLRGKM 478

Query: 482  LNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLW 541
            LNVREAS++Q+L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTDQ           
Sbjct: 479  LNVREASADQILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTDQ----------- 527

Query: 542  FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
                             DHDGSHIKGL+INF+ S +P LL IP FLVEFITPI+K T   
Sbjct: 528  -----------------DHDGSHIKGLIINFLESSFPGLLDIPGFLVEFITPIIKVTITK 570

Query: 602  GK--VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
             +  V++FY+MPDYE W+E    N + W  KYYKGLGTS ++E +EYF+++  H K F  
Sbjct: 571  PRRSVIAFYNMPDYEKWREEESNNYT-WKQKYYKGLGTSLAQEIREYFRDLDKHLKTFHS 629

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
                D + I+LAFSKKK + RK+WL Q+EPG  LD     I  SDF+NKELILFS+AD  
Sbjct: 630  LQGNDKDLIDLAFSKKKADDRKEWLRQYEPGTVLDSSLNEIPISDFINKELILFSLADNI 689

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIP+++DG KPGQRK+LF  FKRN   E KVAQ +  V+E ++YHHGEQSLA TI+GMA
Sbjct: 690  RSIPNVLDGFKPGQRKVLFGCFKRNLRSEIKVAQLAPNVAEATSYHHGEQSLALTIIGMA 749

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVG+NNINLL+PNG FGTR  GGKDAA+ RYIFT LS ITR +F   DD L  Y+ +D
Sbjct: 750  QNFVGANNINLLKPNGAFGTRATGGKDAAAPRYIFTELSKITRKIFHPSDDALYKYVQDD 809

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
               +EP WY+P+IP +LVNG EGIGTGWS+ +P +NP DIV N+R L+NGE +E M PW+
Sbjct: 810  EATVEPEWYLPVIPMILVNGCEGIGTGWSTNVPPFNPLDIVKNIRHLMNGEELEDMQPWF 869

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFL---ESIIDQ 956
            +G+ G+IE    +     Y + G IE++   TL I ELP R WT   +E+L    S  ++
Sbjct: 870  KGWNGSIEAIDPQR----YRMYGRIEQIGPNTLEITELPARTWTSTIKEYLLLGLSGNEK 925

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
            N ++I+   ++  D T+ F + L+ E M +TK+ G  ++FKLT+ IS  NM  FD++G I
Sbjct: 926  NKAWIKDMEEHHGD-TIKFIITLTPEEMEKTKKIGFYERFKLTSPISLMNMVAFDARGKI 984

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKY+T  +IL +F+++RLE+Y+KRK    E L+ E+ KL  +V+FI  +++  + V N+ 
Sbjct: 985  KKYETVFEILNDFYYVRLEYYQKRKDYMSERLQWEVEKLSYQVKFIKMIIDRALTVTNKP 1044

Query: 1077 RTDLLLELRQKGFTPFPK---------NSKSIEAVVAGATDETEESEENPEVVNGVQSI- 1126
            R D++ EL + GF    K         +SK  E V  G  ++  E++ +  ++NG + + 
Sbjct: 1045 RKDIIKELEELGFPRINKEGKPHYGSISSKIEELVDEGEGEDESENQTDEAIINGPEEVY 1104

Query: 1127 -DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELD 1185
              ++YLL M I +LT E+ Q LL  + +   E++DL K +   LW  DL+      DE  
Sbjct: 1105 GTFEYLLGMRIWSLTRERYQKLLNQKQERETELEDLLKLSASDLWNNDLEEFMKAYDEFL 1164

Query: 1186 KSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMG--------- 1236
              D   EE R    GN +G A  K  AKR  K+A  +D     ++               
Sbjct: 1165 IID---EESR---NGNESG-ASSKTKAKRKRKSAADDDDDYGKSKKKPKATKKSLNKLKL 1217

Query: 1237 EMDNVTKV-VKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQL---ASTKLEPSP 1292
            E  N  +V ++PK    +K+    K +   ++  P +K + ++ N  L   +ST  +  P
Sbjct: 1218 ETANFERVLLEPKVAVKVKRPTKIKSETASKEVTPTIKAQESETNSSLSKNSSTIFDKLP 1277

Query: 1293 DQS-------------------GVMETEKVQ---VPAK------KKEPSKRTAAQKKVVT 1324
             Q                    G    E VQ   +P +      KKEP KR   +     
Sbjct: 1278 KQETEDTLSTFSNRFKELTKNFGETPKESVQSQKIPLQKTAVKPKKEPVKRKIPE----I 1333

Query: 1325 VETSDSEDEI 1334
            VE SD EDE+
Sbjct: 1334 VELSDDEDEV 1343


>gi|407916972|gb|EKG10299.1| DNA topoisomerase II eukaryotic-type [Macrophomina phaseolina MS6]
          Length = 1732

 Score = 1139 bits (2945), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 599/1205 (49%), Positives = 802/1205 (66%), Gaps = 73/1205 (6%)

Query: 10   TTSNNANVVGPTAPNK---TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK 66
            T  ++A+ V P AP     +  E YQ+ +QLEHIL RPDTYIGS+E+  + +W+Y   ++
Sbjct: 63   TIMSDASPVMPKAPKAAPGSATEKYQRLTQLEHILKRPDTYIGSVERDQKQMWVYNSVTE 122

Query: 67   TMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE 126
            +M  R +S+VPGLYKIFDEILVNAADNKQ D  M+ ++V ID+    ISV N+G G+P+E
Sbjct: 123  SMEMREVSFVPGLYKIFDEILVNAADNKQNDKNMNEMRVKIDRVSGEISVKNNGKGIPIE 182

Query: 127  IHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLK 186
            IH +EG+Y+PELIFGHLLTSSNYDDN +K TGGRNGYGAKL NIFSTEF +ET D +  K
Sbjct: 183  IHSKEGIYIPELIFGHLLTSSNYDDNQQKVTGGRNGYGAKLCNIFSTEFSLETVDSRVGK 242

Query: 187  KYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLA 246
            KYKQ +T+NM K  +  I+  K G+++T V+FKPD AKF M  ++DD   L K+RV DLA
Sbjct: 243  KYKQTWTDNMAKCGKAKITSHK-GEDYTMVTFKPDYAKFGMDGIDDDFEGLAKRRVYDLA 301

Query: 247  GCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR----------------FHERVNERWE 290
            G   K VKV LNG R+ +K+F +Y+ MY K++                    +  +ERWE
Sbjct: 302  GTC-KGVKVYLNGERIKIKNFKDYMKMYTKAIKSEQVASGASSEGEKEVILTDNPDERWE 360

Query: 291  ICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKN 349
            I   +S+G FQQVSFVN IAT  GGTHV Y+A+Q+ N +  ++ KKNK    +K  ++KN
Sbjct: 361  IGFAVSDGSFQQVSFVNSIATTSGGTHVSYIADQIVNKLTDIIKKKNKGGFQLKPQHLKN 420

Query: 350  HLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANF 409
            H+++FVN  I NPAF SQTKE +T + S FGSKC +S+ FLK + AK+ +V  +L +A  
Sbjct: 421  HIFLFVNCQIVNPAFTSQTKEQMTTKVSQFGSKCSVSDNFLKAI-AKTEVVNNILHFAQQ 479

Query: 410  KQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGR 469
            K  + LKK+DG+K   +   SKL DAN AG ++  +CTLILTEGDSA  LA+AG + V  
Sbjct: 480  KADQVLKKSDGSKRMRMNH-SKLTDANKAGTKDGYRCTLILTEGDSASLLALAGRATVDP 538

Query: 470  DRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTD 529
            D FGVFPLRGK+LNVR+AS +Q+  N EI NIKK +GL+   EY + KSLRYGH+MIMTD
Sbjct: 539  DLFGVFPLRGKMLNVRDASIDQISKNQEIQNIKKFIGLQHKKEYTDTKSLRYGHIMIMTD 598

Query: 530  QVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVE 589
            Q                            DHDGSHIKGLLINF+   +PSLLKI  FL+E
Sbjct: 599  Q----------------------------DHDGSHIKGLLINFLQVQFPSLLKIEGFLLE 630

Query: 590  FITPIVKATNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKE 645
            FITPIVK    + K    + SF++MP+YE WK+    +   W  KYYKGLGTS  ++  E
Sbjct: 631  FITPIVKVWKGDPKHPKQLKSFFTMPEYEEWKKD-PTHQKGWDHKYYKGLGTSKPEDAVE 689

Query: 646  YFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDF 705
            YFQ++  H K+F    DQ+ E I+LAFSKKK +ARK+WL  F PG +LD     I Y DF
Sbjct: 690  YFQDLDKHLKEFHTMKDQEAELIDLAFSKKKADARKEWLRNFVPGTYLDMSASKISYEDF 749

Query: 706  VNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYH 765
            VNKELILFSM D  RSIPS++DG KPGQRK+L+  FK+N  K+ KV + +G+V   + Y 
Sbjct: 750  VNKELILFSMVDNLRSIPSVIDGFKPGQRKVLYTCFKKNLRKDIKVNELAGFVGGLTNYA 809

Query: 766  HGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLF 825
            +G+ SL  TI+G+AQ+FVGSNNINLL+P+G FG+R QGG DAASARYI+TRLSP+ R LF
Sbjct: 810  YGDASLQQTIVGLAQNFVGSNNINLLEPSGNFGSRIQGGSDAASARYIYTRLSPLARKLF 869

Query: 826  PKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRR 885
               D+ LL++  +DG+ IEPT Y+PI+P +LVNG++GIGTGWSS IPNYNP++IV N+RR
Sbjct: 870  HVSDEPLLEHDQDDGKPIEPTMYVPILPMILVNGADGIGTGWSSSIPNYNPKEIVENLRR 929

Query: 886  LLNG---EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRW 942
             + G   + M  M PW++ + GTIE       G  Y  TG I +  E  + I ELPIR W
Sbjct: 930  RMAGSSKDDMVRMMPWFKNWEGTIEDM----GGDRYKFTGKILQTGELEVEISELPIRVW 985

Query: 943  TQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQE-GLLKKFKLT 999
            TQD+++ LE II  +++ SFI+ + +Y   T V F + +S+   M T  E GL ++FKL 
Sbjct: 986  TQDFKDKLEEIIKGEKSASFIKDYNEYHTLTKVRFVIKMSDAKAMATALEMGLEERFKLY 1045

Query: 1000 TTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKV 1059
             +++TSN+  FD +G I KY T   ILEEF+ +RL++YEKRK+  L+ +  EL KL N+ 
Sbjct: 1046 KSMATSNLVAFDHQGRIHKYATELDILEEFYILRLKYYEKRKQNLLDEMNRELEKLSNQS 1105

Query: 1060 RFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEV 1119
            RFI  +++G++ ++ +K+  L+ EL++ GF P PKN    +       ++ EES+  P  
Sbjct: 1106 RFIKMIIDGKLTISKKKKAVLVAELKKLGFKPIPKNEAKKQGEEEEFLEDEEESDNEP-- 1163

Query: 1120 VNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
                 + DYDYLL MAI +LT E+V+ LL       EE+D L K +P+ LW +DL+A   
Sbjct: 1164 ----GANDYDYLLGMAIWSLTQERVEKLLKQIGDKEEEIDILLKKSPKDLWNEDLEAFIE 1219

Query: 1180 QLDEL 1184
            + D +
Sbjct: 1220 EYDNV 1224


>gi|397643397|gb|EJK75837.1| hypothetical protein THAOC_02435 [Thalassiosira oceanica]
          Length = 1391

 Score = 1137 bits (2942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1219 (50%), Positives = 811/1219 (66%), Gaps = 98/1219 (8%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE YQKK+QLEHILLRPDTYIGS+E+ TQ ++I   E+  ++ + IS+ PGLYKIFD
Sbjct: 42   KTIEETYQKKTQLEHILLRPDTYIGSVEQLTQPMFILNSETDRIVQKEISFTPGLYKIFD 101

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDP MD ++V ID E + ISV N+G G+PV  H+E   YVP LIFGHLL
Sbjct: 102  EILVNAADNKQRDPNMDRLEVEIDAETNTISVKNNGKGIPVVEHKEHNCYVPTLIFGHLL 161

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            T SN+DD+ KKTTGGRNGYGAKL NIFSTEF +E  D +  KK+ Q F +NM     P I
Sbjct: 162  TGSNFDDDEKKTTGGRNGYGAKLANIFSTEFTVECLDSENEKKFSQTFRDNMHTAETPKI 221

Query: 205  SKC-----KEGDNWTKVSFKPDLAKFNMT-HLEDDVVALMKKRVVDLAGCL----GKSVK 254
             K      K+GD +TK++F+PDL +FNM   L+ D   L+ KR  D+AG +    GK + 
Sbjct: 222  KKATKAEIKKGD-YTKITFQPDLKRFNMNGQLDSDTTGLLSKRAYDIAGSMSMKGGKKLS 280

Query: 255  VELNGHRVPVKSFAEYVDMY-----PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGI 309
            V LNG ++P+K F  Y+ ++     P +     E+VN++WE+ V +S+G FQQ+SFVN I
Sbjct: 281  VFLNGKKLPIKDFKSYIALFDNIQKPDAF----EKVNDQWEVGVGVSDGSFQQISFVNAI 336

Query: 310  ATIKGGTHVDYVANQVANHVMAVVNKKNKNAN-VKAHNVKNHLWVFVNALIDNPAFDSQT 368
            AT KGG HV+Y+A+QVA  + A V KKNK    +K + +KNHL VFVN L++NP FDSQT
Sbjct: 337  ATTKGGGHVNYIADQVAKKLQAAVKKKNKGGTEIKPNQIKNHLAVFVNCLVENPTFDSQT 396

Query: 369  KETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRG 428
            KE +T + S+F S  +LS++F+K V  KSG+V++++ +A FK ++ LK+  GTK   + G
Sbjct: 397  KENMTKKPSTFSS-VKLSDKFIKAV-EKSGVVDSIMQFAKFKANQALKRKGGTKKTKLTG 454

Query: 429  ISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREAS 488
            I+KL+DAN AG   S+ CTLI+TEGDSAK+LA++GLSVVGRD +GVFPL+GK LNVR+A+
Sbjct: 455  ITKLDDANNAGTAKSKDCTLIITEGDSAKSLAVSGLSVVGRDFYGVFPLKGKPLNVRDAT 514

Query: 489  SNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIF 546
              Q++ N EI N+ +I+GLK G  Y+  N+KSLRYGHLMIM DQ                
Sbjct: 515  HAQIMKNEEIMNLVEIMGLKFGTTYSEENIKSLRYGHLMIMADQ---------------- 558

Query: 547  AWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS 606
                        DHDGSHIKGL+INFIH FWPSLL +P FL +FITPIVK T K  K  +
Sbjct: 559  ------------DHDGSHIKGLVINFIHHFWPSLLDVPGFLQQFITPIVKCT-KGKKSET 605

Query: 607  FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGK---EYFQNITLHKKDF------ 657
            F+++P+YE WKE  G +A  W+ KYYKGLGTSTS EGK   EYF N+ +H+  F      
Sbjct: 606  FFTLPEYEEWKEGTGNDAKGWTTKYYKGLGTSTSSEGKTSKEYFSNLDIHEIHFNEISSD 665

Query: 658  VWE-DDQDGEA-----------IELAFSKKKIEARKKWLLQFEPGNHL---DQKEKYIKY 702
            V + DD D E            I++AFSK K+E RK WL + E    L   + + + + Y
Sbjct: 666  VGDVDDADMEVEDDFVTSGAGLIDMAFSKAKVEERKVWLNRVEKDTFLHYSNAQTRGVNY 725

Query: 703  SDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHS 762
            S+F+NKEL+LFS  D  RSIP ++DGLKP QRK+LF  FK+    E KVAQ +GY+ EHS
Sbjct: 726  SEFINKELVLFSQYDNIRSIPHIMDGLKPSQRKVLFACFKKKLKNEIKVAQLAGYIGEHS 785

Query: 763  AYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITR 822
            AYHHGE SL  T++GMAQ + GSNNINLL P+G         KD ASARYIFTRL  ITR
Sbjct: 786  AYHHGEMSLNGTVIGMAQSYCGSNNINLLYPSG---------KDHASARYIFTRLEKITR 836

Query: 823  FLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVAN 882
             +F  DDD LL YLN+DG  IEP +YMP+IP VLVNGS+GIGTGWS+ I N++PR++++N
Sbjct: 837  TIFHPDDDALLTYLNDDGLSIEPEYYMPVIPLVLVNGSDGIGTGWSTTIQNHDPREVISN 896

Query: 883  VRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRW 942
            +R++++G+  E MHP + G+ G I     K  G +Y V G IE  ++TTL I ELPI +W
Sbjct: 897  LRKMIHGDEPEMMHPHFYGYTGEITAETGKRQG-SYIVRGKIERTSDTTLLITELPIGKW 955

Query: 943  TQDYREFLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESM--MRTKQEGLLKKFK 997
            TQDY+ FLE ++   D++ S I  F++   DTTV F V  +++ +      ++GL  KFK
Sbjct: 956  TQDYKGFLEGLMSGTDKSPSEISDFKENHTDTTVSFTVTTTKDKIDSFEKGKDGLHGKFK 1015

Query: 998  LTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLEN 1057
            L+TTIST NM LFD +G I++Y T   IL  FF  RLEFY KRK + LE +  EL  LEN
Sbjct: 1016 LSTTISTKNMTLFDDQGKIRRYQTSVDILRTFFDHRLEFYVKRKGMLLEKMGRELSILEN 1075

Query: 1058 KVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENP 1117
            K RF+  V N E+VV+NRKR +LL +L+++G+  FPK+ K  +          EES  + 
Sbjct: 1076 KARFVEEVCNEELVVSNRKRKELLHDLKERGYDLFPKDEKKRDDEEDDDEASVEESASDA 1135

Query: 1118 EVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            ++  G     ++YLL M I +LT E+ + L   R +  +EVD+L   +PE LW  DLDA+
Sbjct: 1136 DLAKG-----FEYLLGMKIWSLTHERAEELRRQRAEKADEVDELNATSPEQLWSNDLDAI 1190

Query: 1178 DMQLDELDKSDARAEEERM 1196
            D  L E D   A   +E M
Sbjct: 1191 DEALTERDADIAADLKEEM 1209


>gi|38453799|dbj|BAD02200.1| DNA topoisomerase II [Arthroderma obtusum]
          Length = 1086

 Score = 1137 bits (2940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/1127 (51%), Positives = 778/1127 (69%), Gaps = 61/1127 (5%)

Query: 33   KKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAAD 92
            K +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNAAD
Sbjct: 1    KITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNAAD 60

Query: 93   NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN 152
            NKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D 
Sbjct: 61   NKQNDPNMSEIRVTLDKEAGEISVWNNGHGIPVEIHKKEQIYIPELIFGHLLTSSNYNDM 120

Query: 153  VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             +K TGGRNGYGAKL NIFS EF +ETAD    KK+K  + NNM    +  I++ K GD+
Sbjct: 121  QEKVTGGRNGYGAKLCNIFSNEFTVETADSSNKKKFKLTWMNNMSTMGKAKITESK-GDD 179

Query: 213  WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            +TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+PVKSF +Y++
Sbjct: 180  YTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTTVK--LNGTRIPVKSFKKYME 237

Query: 273  MYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
            MY K++                 E  + RWEI  T+S+G FQQVSFVN IAT  GGTHV+
Sbjct: 238  MYTKAIKTERGEDPTSDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTHVN 297

Query: 320  YVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT R S 
Sbjct: 298  YISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNSQIVNPAFTSQTKEQLTTRPSQ 357

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLA 438
            FGSKC +S+EFLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN A
Sbjct: 358  FGSKCIVSDEFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDANKA 415

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            G +    CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+EI
Sbjct: 416  GTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNAEI 475

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
             NIK  +GL+   EY + + LRYGHLMIMTDQ                            
Sbjct: 476  QNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ---------------------------- 507

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPDYE 614
            DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++P+YE
Sbjct: 508  DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHSKSFFTLPEYE 567

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
             WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAFSK
Sbjct: 568  EWKEA-HAHDKKWQKKYYKGLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSK 626

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            KK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPGQR
Sbjct: 627  KKADERKEWLRQFKPGTYLDHSTDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQR 686

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNN+N L+P+
Sbjct: 687  KVLYTMFKRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNVNCLEPS 746

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++P 
Sbjct: 747  GNFGSRLQGGSDSASARYIYTRLSPFARRLFHQSDEPLLVNNVDDGKVIEPETYVPVVPL 806

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            +L+NG++GIGTGWS+ IPNYNP D+V N++RL+ GE + PM PW+RGF G  E T S   
Sbjct: 807  ILINGADGIGTGWSTSIPNYNPEDVVDNLKRLMAGEELVPMKPWFRGFKG--EVTGS--- 861

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTT 972
            G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  D+  SFI+ ++ Y+  T 
Sbjct: 862  GDRYKFSGIIKQTADNEVEITELPIRTWTQDFKDKLEEIIKADKVPSFIKDYKDYNTHTN 921

Query: 973  VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
            V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  F+ +
Sbjct: 922  VHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRAFYAV 981

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            R++ YEKRK+  L  L+  L KL N+ RF+  +++G++V++ +K+  L+ EL++KGF PF
Sbjct: 982  RIKLYEKRKQHLLSELQTHLDKLSNQARFVQMIIDGKLVISKKKKALLIQELQEKGFKPF 1041

Query: 1093 PKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            P+ + + E   AG  D  EE +E       + S  YDYLLSM + +L
Sbjct: 1042 PRVADTPEPGDAG--DVEEEEDEEETTTAALSSDAYDYLLSMPLWSL 1086


>gi|281208664|gb|EFA82840.1| DNA topoisomerase II [Polysphondylium pallidum PN500]
          Length = 1524

 Score = 1137 bits (2940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 604/1246 (48%), Positives = 816/1246 (65%), Gaps = 114/1246 (9%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K+++E Y++   L+ ILLRPDTYIGS EK  + LWI+E E   M+ R ISYVPGLYKIFD
Sbjct: 135  KSVDETYKRMELLDQILLRPDTYIGSTEKQEEELWIWENER--MVRRKISYVPGLYKIFD 192

Query: 85   EILVNAADNKQR-----DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELI 139
            EILVNAADN QR       KM  +KV ID EH+ I V N G GVPVE+H++E +YVPE+I
Sbjct: 193  EILVNAADNIQRPLQEGQKKMKQIKVEIDPEHNRIMVWNDGPGVPVEMHKKEQMYVPEMI 252

Query: 140  FGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
            FGHLLTSSNYDD+ K+  GGRNG+GAKL N FSTEF++E AD  R K +KQ F  N+  +
Sbjct: 253  FGHLLTSSNYDDSEKRLAGGRNGFGAKLANAFSTEFLVECADSGRRKLFKQTFKANLKNR 312

Query: 200  SEPNISKCKEGDNWTKVSFKPDLAKFNM-THLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
             +P I+   +  ++T+++F PDL+KF M + L+DD VAL+ KRV D+AGC   S+KV LN
Sbjct: 313  EKPEITTYSKATDYTQITFYPDLSKFGMLSMLDDDNVALLTKRVYDIAGC-NPSLKVTLN 371

Query: 259  GHRVPVKSFAEYVDMYPKSVTR----FHERVNERWEICVTLS-EGQFQQVSFVNGIATIK 313
            G  + +KSF  Y+ +Y KS+ +    ++ERV+ERWEI + LS EGQF QVSFVN I T K
Sbjct: 372  GEDLNIKSFQSYIQLYFKSLEKAPEIYYERVSERWEIAIALSHEGQFNQVSFVNSICTPK 431

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETL 372
            GGTHV +  N V   +   V KK+K+ A +K   +KNHL+VFVN+LI+NPAFDSQTKE L
Sbjct: 432  GGTHVTHALNDVLAEIGKAVQKKHKSKAEIKPAFIKNHLFVFVNSLIENPAFDSQTKENL 491

Query: 373  TLRQSSFGSKCELSEEFLKKVT-AKSGIVETLLSWANFKQSKDLKKND--GTKTEDVRGI 429
            + + +SFGS+C  SE+FLKK+  +KSGIV+ ++S+A  K+   + +N    TK      I
Sbjct: 492  STKITSFGSQCHPSEKFLKKIVESKSGIVDQIISYAKHKEEMAMLRNTTATTKKGSRLNI 551

Query: 430  SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS 489
             KL+DANLAG  +SE CTLILTEGDSAK LA++G+SVVG D +G FPLRGKLLNVRE+ +
Sbjct: 552  PKLDDANLAGTSHSEDCTLILTEGDSAKTLAVSGISVVGWDHYGCFPLRGKLLNVRESDA 611

Query: 490  NQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
              ++ N EI NI  I+GL+ G +Y +VKSLRYGHLMIMTD                    
Sbjct: 612  RTMMTNEEIVNIINIMGLQHGKQYEDVKSLRYGHLMIMTD-------------------- 651

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYS 609
                    QDHDGSHIKGLL+NFIH FWPSLL+I  FLVEF+TPI+KAT K  K ++FY+
Sbjct: 652  --------QDHDGSHIKGLLLNFIHHFWPSLLRIEGFLVEFVTPIIKAT-KGNKTIAFYT 702

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            +P+Y AW+E+   N   + IKYYKGLGTST +E KEYF  +  HK DF +++  D +AI+
Sbjct: 703  IPEYLAWREA-NNNGKGYEIKYYKGLGTSTEEEAKEYFSQLVNHKIDFEYDNGAD-DAID 760

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKE-KYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
             AF+KK+   RK W+ Q+ PG +LDQ   K +K +DF++KELILFS+AD +RSIPS+VDG
Sbjct: 761  KAFNKKRANDRKTWMDQYTPGAYLDQYGIKKVKITDFIDKELILFSIADCERSIPSIVDG 820

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
             K  QRKILF  FKRN  KE KVAQ  GYVSE SAYHHG+QSLAS I+G+AQ +VG+NNI
Sbjct: 821  FKTSQRKILFSCFKRNLKKEIKVAQLIGYVSEQSAYHHGDQSLASAIIGLAQTYVGANNI 880

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            N+L P G FG+R  GGKD+++ RYI TRL  I R LFP++D  LL +L +DG++++P WY
Sbjct: 881  NVLYPGGGFGSRLAGGKDSSAPRYINTRLEEIARTLFPEEDHALLSHLTDDGKRVQPKWY 940

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            +P+IP +LVNGS+GIGTGWSS IPNYNPRD++ N++ L+ G+ ++P+ PWYRGF GTIE 
Sbjct: 941  IPVIPMILVNGSKGIGTGWSSTIPNYNPRDLIENMKLLIEGKELKPIVPWYRGFKGTIEL 1000

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN----------- 957
               K +   +   G+  +++E  L I ELPI  WT D+++ ++++ID             
Sbjct: 1001 QTGKTSN--FVAKGVWRKLDEYRLEITELPIESWTNDFKDLVQNLIDPQGKQKRKEAKEK 1058

Query: 958  ------------------------------DSFIRGFRQYSDDTTVDFEVFLSEESMMRT 987
                                          D  ++         ++ F +    E++   
Sbjct: 1059 IKQVKKGKATSTKVVKRKKKDEDDDEVVIADPIVKSMSNQGTVGSIHFII----ETLKPV 1114

Query: 988  KQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLEN 1047
             +  + K FKL   ++ +NM +FD +G IK+++T   I++ FF IRLE+Y+KRK    + 
Sbjct: 1115 DEIDVNKTFKLEKKLAETNMTVFDEEGRIKQFETTTDIIKYFFKIRLEYYQKRKDYLCDK 1174

Query: 1048 LELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPK--NSKSIEAVVAG 1105
            LE E  +L NK RFIL VVN E+V+ N KR DL+ +L++  F  F K    K+ E V   
Sbjct: 1175 LEEEHRRLSNKARFILAVVNKELVIANVKRLDLVKKLKEMKFDQFSKKVGKKAEEQVKKS 1234

Query: 1106 ATDETEE-----SEENPE-----VVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLN 1155
              D+ EE     S++  E     +        YDYLLS+ + +LTLE+V+ +  +R+K  
Sbjct: 1235 KVDKVEEELAVNSDQEEEGSDDEMEMDDDCRGYDYLLSLPLWSLTLERVKKIQEEREKKK 1294

Query: 1156 EEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGN 1201
             E+D LR     ++++ DLD     LD+ D     AE++R+K KG+
Sbjct: 1295 VELDKLRGTAITTMYLLDLDKFSESLDKQD-----AEDQRLKDKGD 1335


>gi|38453813|dbj|BAD02207.1| DNA topoisomerase II [Arthroderma simii]
 gi|38453815|dbj|BAD02208.1| DNA topoisomerase II [Arthroderma simii]
          Length = 1089

 Score = 1137 bits (2940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/1129 (51%), Positives = 782/1129 (69%), Gaps = 62/1129 (5%)

Query: 33   KKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAAD 92
            K +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNAAD
Sbjct: 1    KITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNAAD 60

Query: 93   NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN 152
            NKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D 
Sbjct: 61   NKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEQIYIPELIFGHLLTSSNYNDM 120

Query: 153  VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM    +  I++CK GD+
Sbjct: 121  QEKVTGGRNGYGAKLCNIFSNEFTVETADSKQKKKFKLTWTNNMSTMGKAKITECK-GDD 179

Query: 213  WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            +TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+P+KSF +Y++
Sbjct: 180  YTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTAVK--LNGTRIPIKSFKKYME 237

Query: 273  MYPKSVTR---------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            MY K++                   E  + RWEI  T+S+G FQQVSFVN IAT  GGTH
Sbjct: 238  MYTKAIKAERGEDPTSASDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTH 297

Query: 318  VDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN  I NPAF SQTKE LT R 
Sbjct: 298  VNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNCQIVNPAFTSQTKEQLTTRA 357

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN
Sbjct: 358  SQFGSKCVVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDAN 415

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+
Sbjct: 416  KAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNA 475

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI NIK  +GL+   EY + + LRYGHLMIMTDQ                          
Sbjct: 476  EIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ-------------------------- 509

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPD 612
              DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    N K      SF+++P+
Sbjct: 510  --DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGNPKNPTHSKSFFTLPE 567

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            YE WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAF
Sbjct: 568  YEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAF 626

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            SKKK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPG
Sbjct: 627  SKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINKELILFSMADNIRSIPSVVDGLKPG 686

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+
Sbjct: 687  QRKVLYTMFKRNVRKDVKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLE 746

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P+G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++
Sbjct: 747  PSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNIDDGKVIEPETYVPVV 806

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ GE + PM PW+RGF G  E T S 
Sbjct: 807  PLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMAGEELVPMKPWFRGFKG--EVTGS- 863

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDD 970
              G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  
Sbjct: 864  --GDRYKFSGIIKQTADNEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYNTH 921

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            T V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  F+
Sbjct: 922  TDVHFIIQMDEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRAFY 981

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++KGF 
Sbjct: 982  AVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQELQEKGFK 1041

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            PFPK   + E   AG  +E E+ EE         S  YDYLLSM + +L
Sbjct: 1042 PFPKVVDTPEPGEAGDVEEEEDEEEE-TATAAASSDAYDYLLSMPLWSL 1089


>gi|194383172|dbj|BAG59142.1| unnamed protein product [Homo sapiens]
          Length = 1178

 Score = 1136 bits (2939), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 602/1168 (51%), Positives = 791/1168 (67%), Gaps = 74/1168 (6%)

Query: 58   LWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVH 117
            +W+Y+E+   M  R +++VPGLYKIFDEILVNAADNKQRD  M  +KV ID E ++IS+ 
Sbjct: 1    MWVYDEDV-GMNCREVTFVPGLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIW 59

Query: 118  NSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFII 177
            N+G G+PV  H+ E VYVP LIFG LLTSSNYDD+ KK TGGRNGYGAKL NIFST+F +
Sbjct: 60   NNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTV 119

Query: 178  ETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVAL 237
            ETA  +    +KQ + NNM K SE  I K  +G+++T ++F+PDL+KF M  L+ D+VAL
Sbjct: 120  ETACKEYKHSFKQTWMNNMMKTSEAKI-KHFDGEDYTCITFQPDLSKFKMEKLDKDIVAL 178

Query: 238  MKKRVVDLAG-CLGKSVKVELNGHRVPVKSFAEYVDMYPK--------SVTRFHERVNER 288
            M +R  DLAG C G  VKV  NG ++PV  F  YV +Y K        ++   HE  NER
Sbjct: 179  MTRRAYDLAGSCRG--VKVMFNGKKLPVNGFRSYVGLYVKDKLDETGVALKVIHELANER 236

Query: 289  WEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNV 347
            W++C+TLSE  FQQ+SFVN IAT KGG HVDYV +QV   ++ VV KKNK   +VK   V
Sbjct: 237  WDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQV 296

Query: 348  KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
            KNH+WVF+N LI+NP FDSQTKE +TL+  SFGSKC+LSE+F K   +  GIVE++L+W 
Sbjct: 297  KNHIWVFINCLIENPTFDSQTKENMTLQPKSFGSKCQLSEKFFK-AASNCGIVESILNWV 355

Query: 408  NFKQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSV 466
             FK    L KK    K   ++GI KL+DAN AGG++S +CTLILTEGDSAK+LA++GL V
Sbjct: 356  KFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGV 415

Query: 467  VGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGH 523
            +GRDR+GVFPLRGK+LNVREAS  Q++ N+EI NI KI+GL+    Y++   +K+LRYG 
Sbjct: 416  IGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLRYKKSYDDAESLKTLRYGK 475

Query: 524  LMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI 583
            +MIMTDQ                            D DGSHIKGLLINFIH  WPSLLK 
Sbjct: 476  IMIMTDQ----------------------------DQDGSHIKGLLINFIHHNWPSLLK- 506

Query: 584  PSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEG 643
              FL EFITPIVKA+ KN + LSFYS+P+++ WK+ +  N  +W IKYYKGLGTST+KE 
Sbjct: 507  HGFLEEFITPIVKAS-KNKQELSFYSIPEFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEA 564

Query: 644  KEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNH 692
            KEYF ++  H+  F +   +D  AI LAFSKKKI+ RK+WL  F            P   
Sbjct: 565  KEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQF 624

Query: 693  L-DQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKV 751
            L     K++ Y+DF+NKELILFS +D +RSIPS+VDG KPGQRK+LF  FKRN  +E KV
Sbjct: 625  LYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKV 684

Query: 752  AQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASAR 811
            AQ +G V+E SAYHHGEQ+L  TI+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS R
Sbjct: 685  AQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPR 744

Query: 812  YIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYI 871
            YIFT LS + R LFP  DD LL +L +D Q++EP WY+PIIP VL+NG+EGIGTGW+  +
Sbjct: 745  YIFTMLSTLARLLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKL 804

Query: 872  PNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETT 931
            PNY+ R+IV NVRR+L+G    PM P Y+ F GTI++    +    Y V+G I  V+  T
Sbjct: 805  PNYDAREIVNNVRRMLDGLDPHPMLPNYKNFKGTIQELGQNQ----YAVSGEIFVVDRNT 860

Query: 932  LRIKELPIRRWTQDYRE-FLESIIDQND---SFIRGFRQYSDDTTVDFEVFLSEESMMRT 987
            + I ELP+R WTQ Y+E  LE +++  D   + I  +++Y  DTTV F V ++EE + + 
Sbjct: 861  VEITELPVRTWTQVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQA 920

Query: 988  KQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLEN 1047
            +  GL K FKL TT++ ++M LFD  G +KKY+T + IL+EFF +RL +Y  RK+  +  
Sbjct: 921  EAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGM 980

Query: 1048 LELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGAT 1107
            L  E  KL N+ RFIL  + G+I + NR + DL+  L Q+G+   P  +       A   
Sbjct: 981  LGAESTKLNNQARFILEKIQGKITIENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEE 1040

Query: 1108 DETEESEENPEVVNGVQS-IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
            DET+   ++    +G  S  D++Y+L+M++ +LT EKV+ L+  RD    EV+DL++ +P
Sbjct: 1041 DETQNQHDDSSSDSGTPSGPDFNYILNMSLWSLTKEKVEELIKQRDAKGREVNDLKRKSP 1100

Query: 1167 ESLWVKDLDALDMQLDELDKSDARAEEE 1194
              LW +DL A    ++ELDK +++  E+
Sbjct: 1101 SDLWKEDLAAF---VEELDKVESQERED 1125


>gi|18369818|dbj|BAB84104.1| DNA topoisomerase II [Penicillium citrinum]
          Length = 1100

 Score = 1135 bits (2937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 589/1140 (51%), Positives = 780/1140 (68%), Gaps = 66/1140 (5%)

Query: 28   EEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEIL 87
            +E YQK +QLEHI+ RPDTYIGSIE   Q +W++  E+++M  R +S+VPGLYKIFDEI+
Sbjct: 1    QEQYQKLTQLEHIVKRPDTYIGSIEMTQQQMWVFNSETESMEFRNVSFVPGLYKIFDEIV 60

Query: 88   VNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
            VNAADNKQ D  M  ++V ID+E   ISV N+G G+P+EIH +E +YVPELIFG+LLTSS
Sbjct: 61   VNAADNKQNDKSMSEIRVTIDREKGEISVWNNGRGIPIEIHSKEKIYVPELIFGNLLTSS 120

Query: 148  NYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKC 207
            NYDDN KK TGGRNG+GAKL N+FSTEF +ET D  + KKYKQ +T NM K  +  I+  
Sbjct: 121  NYDDNQKKVTGGRNGFGAKLCNVFSTEFTLETQDSNQKKKYKQTWTENMTKMGKAKITDA 180

Query: 208  KEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVV-DLAGCLGKSVKVELNGHRVPVKS 266
             +G+++T V+FKPD AKF M  ++DD  AL+K  VV DLAG  G  V V+LN  RVP+++
Sbjct: 181  SKGEDYTMVTFKPDFAKFGMEGIDDDFEALVKLLVVYDLAGTAG--VTVKLNKTRVPIRN 238

Query: 267  FAEYVDMYPKSVTRFHERVNE---------------RWEICVTLSEGQFQQVSFVNGIAT 311
            F +Y+ MY K++ R  ER ++               RWEI  ++S+G FQQVSFVN IAT
Sbjct: 239  FKQYMQMYTKAIRR--ERGDDGPAPKDEILTCSPDPRWEIGFSVSDGAFQQVSFVNSIAT 296

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
              GGTHV+Y+A+Q+ N +   V KKNK  A +KA  ++NH+++FVNA I NP+F+SQTKE
Sbjct: 297  TSGGTHVNYIADQICNRLADQVKKKNKTGATLKAAQIRNHIFIFVNAQIVNPSFNSQTKE 356

Query: 371  TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGIS 430
             LT + S FGSKC L EEF KK+  K+ ++  +L +A  K  + LKK+DG +   +    
Sbjct: 357  QLTTKASQFGSKCVLEEEFYKKI-LKTDVMNNILHFAAQKADQILKKSDGGRRTRMNN-P 414

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KL +AN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +
Sbjct: 415  KLVEANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASFD 474

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            Q+  N+EI NIK  +GL+   EY   K LRYGHLMIMTDQ                    
Sbjct: 475  QISKNAEIQNIKNFIGLQHKKEYTETKGLRYGHLMIMTDQ-------------------- 514

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLS 606
                    DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPI+K    +     K  S
Sbjct: 515  --------DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIIKVWKGDPKNPTKQRS 566

Query: 607  FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
            F++MP+YE W E+  G    W  KYYKGLGTS++ + + YF+++  H K+F    D + E
Sbjct: 567  FFTMPEYEEWLEAHKGE-RGWDHKYYKGLGTSSTTDAQVYFRDLDRHLKEFHTMKDHEAE 625

Query: 667  AIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
             IELAFSKKK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD QRSIPS+V
Sbjct: 626  LIELAFSKKKADERKEWLRQFKPGTYLDHSVSKISYTDFINKELILFSMADNQRSIPSVV 685

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DGLKPGQRK+L+  F+RN  K+ KV + +G VS  +AY HGE SL  TI+G+AQ FVGSN
Sbjct: 686  DGLKPGQRKVLYACFRRNLKKDMKVVELAGLVSGMTAYQHGETSLQQTIVGLAQTFVGSN 745

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            NIN L+P+G FG+R QGG D ASARYI+TRLSP  R +F   D+ LL Y  +DG++IEP 
Sbjct: 746  NINCLEPSGNFGSRLQGGSDCASARYIYTRLSPFARKIFHTADEPLLTYNEDDGKKIEPE 805

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI 906
             YMP++P VL+NG++GIGTGWSS IPNYNP D+V N++RL+ GE +EPM PW+RGF G +
Sbjct: 806  TYMPVVPMVLINGADGIGTGWSSSIPNYNPEDVVNNLKRLMKGEPIEPMQPWFRGFTGEV 865

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGF 964
                    G  +  +GII+E  +  + I ELPIR WTQD+++ LE II  ++  SFI+ +
Sbjct: 866  VNM----GGDRFKFSGIIKETGDKEVEITELPIRTWTQDFKDKLEDIIKAEKVPSFIKDY 921

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
            + Y+    V F + L E++M     EGL +KFKLT +I+TSN+  FD +G I KY T + 
Sbjct: 922  KDYNTHDKVHFVIQLDEKNMKAALSEGLEEKFKLTKSIATSNLVAFDPEGRITKYATVDD 981

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            IL+EFF +RL++YE+RK+ QL  L+ EL KL N+ RF+  +++G++V++ +K++ L+ EL
Sbjct: 982  ILKEFFTVRLKYYERRKQHQLSELQKELEKLSNQARFVQMIIDGKLVISKKKKSVLVNEL 1041

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQ-SIDYDYLLSMAIGTLTLEK 1143
            R+KGF  F   +K  +A   G  +   E  E  +  +    S  YDYLL MA+ +LT E+
Sbjct: 1042 REKGFKAF---TKVADAAKLGEDEAVVEEGEEDDDADVEVLSSSYDYLLGMALWSLTHER 1098


>gi|25006389|dbj|BAC24014.1| DNA topoisomerase II [Arthroderma gypseum]
          Length = 1091

 Score = 1135 bits (2937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/1130 (51%), Positives = 780/1130 (69%), Gaps = 61/1130 (5%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNA
Sbjct: 2    YQKITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNA 61

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+
Sbjct: 62   ADNKQNDPSMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEHIYIPELIFGHLLTSSNYN 121

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  +K TGGRNGYGAKL NIFS EF +ETAD    KK+K  +T NM    +  I++ K G
Sbjct: 122  DMQEKVTGGRNGYGAKLCNIFSNEFTVETADSSNKKKFKLTWTKNMSTMGKAKITESK-G 180

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+PVKSF +Y
Sbjct: 181  DDYTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTTVK--LNGTRIPVKSFKKY 238

Query: 271  VDMYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++MY K++                 E  + RWEI  T+S+G FQQVSFVN IAT  GGTH
Sbjct: 239  MEMYTKAIKTERGEDPTSDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTH 298

Query: 318  VDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT R 
Sbjct: 299  VNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNSQIVNPAFTSQTKEQLTTRS 358

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN
Sbjct: 359  SQFGSKCIVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDAN 416

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG +    CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+
Sbjct: 417  KAGTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNA 476

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI NIK  +GL+   EY + + LRYGHLMIMTDQ                          
Sbjct: 477  EIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ-------------------------- 510

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPD 612
              DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++P+
Sbjct: 511  --DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHSKSFFTLPE 568

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            YE WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAF
Sbjct: 569  YEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQVYFQDLDRHLKQFHTLQDKEAELIELAF 627

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            SKKK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPG
Sbjct: 628  SKKKADERKEWLRQFKPGTYLDHSMDQITYTDFINKELILFSMADNIRSIPSVVDGLKPG 687

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+
Sbjct: 688  QRKVLYTMFKRNVKKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLE 747

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P+G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++
Sbjct: 748  PSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLANNVDDGKVIEPETYVPVV 807

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P +L+NG++GIGTGWS+ IPNYNP D+V N++RL+ G+ + PM PW+RGF G  E T S 
Sbjct: 808  PLILINGADGIGTGWSTSIPNYNPEDVVDNLKRLMAGDELVPMKPWFRGFKG--EVTGS- 864

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDD 970
              G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  
Sbjct: 865  --GDRYKFSGIIKQTGDNEVEISELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYNTH 922

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            T V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  F+
Sbjct: 923  TNVHFIIQMEEKHMKKAVEEGLEEKFKLVKPIATSNMVAFDAEGRITRYETPEDILRAFY 982

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++KGF 
Sbjct: 983  AVRIKLYEKRKQHLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKALLIQELQEKGFK 1042

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLT 1140
            PFPK   + E     A D  +E +E       + S  YDYLLSM + +LT
Sbjct: 1043 PFPKVVDTPEP--GEAGDVEDEEDEEETATAALSSDAYDYLLSMPLWSLT 1090


>gi|38453801|dbj|BAD02201.1| DNA topoisomerase II [Arthroderma incurvatum]
          Length = 1086

 Score = 1135 bits (2937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 584/1127 (51%), Positives = 779/1127 (69%), Gaps = 61/1127 (5%)

Query: 33   KKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAAD 92
            K +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNAAD
Sbjct: 1    KITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNAAD 60

Query: 93   NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN 152
            NKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D 
Sbjct: 61   NKQNDPSMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEHIYIPELIFGHLLTSSNYNDL 120

Query: 153  VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             +K TGGRNGYGAKL NIFS EF +ETAD    KK++  +TNNM    +  I++CK GD+
Sbjct: 121  QEKVTGGRNGYGAKLCNIFSNEFTVETADSSNKKKFRLTWTNNMSTMGKAKITECK-GDD 179

Query: 213  WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            +TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+PVKSF +Y++
Sbjct: 180  YTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTTVK--LNGTRIPVKSFKKYME 237

Query: 273  MYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
            MY K++                 E  + RWEI  T+S+G FQQVSFVN IAT  GGTHV+
Sbjct: 238  MYTKAIKTERGEDPTSDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTHVN 297

Query: 320  YVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT R S 
Sbjct: 298  YISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNSQIVNPAFTSQTKEQLTTRSSQ 357

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLA 438
            FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN A
Sbjct: 358  FGSKCIVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDANKA 415

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            G +    CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+EI
Sbjct: 416  GTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNAEI 475

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
             NIK  +GL+   EY + + LRYGHLMIMTDQ                            
Sbjct: 476  QNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ---------------------------- 507

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPDYE 614
            DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++P+YE
Sbjct: 508  DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHSKSFFTLPEYE 567

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
             WKES   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAFSK
Sbjct: 568  EWKES-HAHDKKWQKKYYKGLGTSSTEDAQVYFQDLDRHLKQFHTLQDKEAELIELAFSK 626

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            KK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPGQR
Sbjct: 627  KKADERKEWLRQFKPGTYLDHSMDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQR 686

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+P+
Sbjct: 687  KVLYTMFKRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPS 746

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++P 
Sbjct: 747  GNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNVDDGKVIEPETYVPVVPL 806

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            +L+NG++GIGTGWS+ IPNYNP D+V N++RL+ G+ + PM PW+RGF G  E T S   
Sbjct: 807  ILINGADGIGTGWSTSIPNYNPEDVVDNLKRLMVGDELVPMKPWFRGFKG--EVTGS--- 861

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTT 972
            G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  T 
Sbjct: 862  GDRYKFSGIIKQTGDNEVEISELPIRTWTQDFKDKLEDIIKAEKVPSFIKDYKDYNTHTN 921

Query: 973  VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
            V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  F+ +
Sbjct: 922  VHFIIQMDEKHMKKAVEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRAFYTV 981

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++KGF PF
Sbjct: 982  RIKLYEKRKQHLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAILIEELQEKGFKPF 1041

Query: 1093 PKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            PK   + E     A D  +E +E       + S  YDYLLSM I +L
Sbjct: 1042 PKVIDTREP--GEAGDVDDEEDEEEAASAALTSDAYDYLLSMPIWSL 1086


>gi|38453819|dbj|BAD02210.1| DNA topoisomerase II [Trichophyton verrucosum]
          Length = 1089

 Score = 1135 bits (2936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 583/1129 (51%), Positives = 782/1129 (69%), Gaps = 62/1129 (5%)

Query: 33   KKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAAD 92
            K +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNAAD
Sbjct: 1    KITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNAAD 60

Query: 93   NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN 152
            NKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E  Y+PELIFGHLLTSSNY+D 
Sbjct: 61   NKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEQTYIPELIFGHLLTSSNYNDM 120

Query: 153  VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM    +  I++CK GD+
Sbjct: 121  QEKVTGGRNGYGAKLCNIFSNEFTVETADSKQKKKFKLTWTNNMSTMGKAKITECK-GDD 179

Query: 213  WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            +TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+P+KSF +Y++
Sbjct: 180  YTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTAVK--LNGTRIPIKSFKKYME 237

Query: 273  MYPKSVTR---------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            MY K++                   E  + RWEI  T+S+G FQQVSFVN IAT  GGTH
Sbjct: 238  MYTKAIKAERGEDPTSASDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTH 297

Query: 318  VDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT R 
Sbjct: 298  VNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNSQIVNPAFTSQTKEQLTTRP 357

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN
Sbjct: 358  SQFGSKCVVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDAN 415

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+
Sbjct: 416  KAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNA 475

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI NIK  +GL+   EY + + LRYGHLMIMTDQ                          
Sbjct: 476  EIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ-------------------------- 509

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPD 612
              DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++P+
Sbjct: 510  --DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHSKSFFTIPE 567

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            YE WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAF
Sbjct: 568  YEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAF 626

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            SKKK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPG
Sbjct: 627  SKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINKELILFSMADNIRSIPSVVDGLKPG 686

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+
Sbjct: 687  QRKVLYTMFKRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLE 746

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P+G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++
Sbjct: 747  PSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNVDDGKVIEPETYVPVV 806

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ GE + PM PW+RGF G +  +  +
Sbjct: 807  PLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMVGEELVPMKPWFRGFKGEVSGSGDR 866

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDD 970
                 Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  
Sbjct: 867  -----YKFSGIIKQTADNEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYNTH 921

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            T V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  F+
Sbjct: 922  TNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRAFY 981

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +R++ YEKRK+  L  L+ +L KL N+ RF+  +++GE+V++ +K+  L+ EL++KGF 
Sbjct: 982  AVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGELVISKKKKAVLIQELQEKGFK 1041

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            PFPK   + E   AG  +E E+ EE       V S  YDYLLSM + +L
Sbjct: 1042 PFPKVVGTPEPGEAGDVEEEEDEEEE-TTTAAVSSDAYDYLLSMPLWSL 1089


>gi|320580632|gb|EFW94854.1| DNA topoisomerase II [Ogataea parapolymorpha DL-1]
          Length = 1372

 Score = 1135 bits (2936), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 590/1247 (47%), Positives = 813/1247 (65%), Gaps = 100/1247 (8%)

Query: 5    KRLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEE 64
            KR PL+ S N           +  + YQK SQLEHIL RPDTYIGS+EK     WIY E+
Sbjct: 20   KRKPLSNSTNTT----NGKKSSASDQYQKLSQLEHILKRPDTYIGSVEKIESEQWIYNEQ 75

Query: 65   SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
            +++M  RT++ VPGL+KIFDEILVNAADNK RDP M  + V ID+E+++ISV N G G+P
Sbjct: 76   TESMEKRTVNIVPGLFKIFDEILVNAADNKIRDPSMKKIDVKIDKENNVISVKNDGKGIP 135

Query: 125  VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
            VEIH +E +Y+PELIFG+LLTSSNYDD+ KK TGGRNGYGAKL NIFSTEF + TAD   
Sbjct: 136  VEIHTKEQIYIPELIFGNLLTSSNYDDDQKKVTGGRNGYGAKLCNIFSTEFTVRTADKNT 195

Query: 185  LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
               Y Q + NNM +  +P IS  K+ + +T+V FKPDL+KF M  L+DD++ ++++RV D
Sbjct: 196  QLLYTQTWRNNMSETGKPKISTMKKQEEYTEVIFKPDLSKFGMESLDDDILGVLRRRVYD 255

Query: 245  LAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV-------------------------- 278
            L G + + VKV LNG ++ V +F +YV++Y K++                          
Sbjct: 256  LCGSV-RGVKVSLNGQQLKVHNFKQYVELYVKALEKEKGNLPAPVKTEDSEDGSLAPAPL 314

Query: 279  -----TRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVV 333
                 T  H+ +N+RWE+  ++S+G F QVSFVN IAT  GGTHV+ ++N +   +M  +
Sbjct: 315  SQPLPTIVHQVINDRWEVAFSISDGTFNQVSFVNSIATTAGGTHVELISNMLVTKIMEQI 374

Query: 334  NKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSK-CELSEEFLKK 392
             KK+K A +K   +KN++++FVN LI+NPAF SQTKE LT R S FG K  EL + F+KK
Sbjct: 375  KKKSKTAIIKPIQIKNNMFLFVNCLIENPAFTSQTKEQLTTRASQFGGKKLELPDSFVKK 434

Query: 393  VTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTE 452
            V A SGI+E+++  A     K LKKNDG++   + G  KLEDAN AG +   +CTLILTE
Sbjct: 435  VLA-SGILESVMDIAQANADKALKKNDGSRKSRLTGYPKLEDANKAGTKEGHKCTLILTE 493

Query: 453  GDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVE 512
            GDSAK+LA+AGL+VVGRD +G +PLRGK+LNVREAS++Q++ N+EI  IK+I+GL+    
Sbjct: 494  GDSAKSLAVAGLAVVGRDYYGCYPLRGKMLNVREASTDQIMKNAEIQAIKQIMGLQHKKR 553

Query: 513  YN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLI 570
            Y+  N+ +LRYGH+MIM+D                            QDHDGSHIKGL+I
Sbjct: 554  YDLSNINTLRYGHIMIMSD----------------------------QDHDGSHIKGLII 585

Query: 571  NFIHSFWPSLLKIPSFLVEFITPIVKATNKNG----KVLSFYSMPDYEAWKESLGGNASS 626
            NF+ + +P LL+IP FL+EFITPIVK T   G    K +SF++MP+YE W++++ G   S
Sbjct: 586  NFLETSFPGLLEIPGFLIEFITPIVKVTILTGPDKNKKISFFNMPEYEEWRDTI-GKTCS 644

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            +  KYYKGLGTS   E +EYF  +  H K F    ++D   I+LAFSKKK + RK+WL  
Sbjct: 645  YKQKYYKGLGTSLPTEMREYFSQLDRHLKTFHTLQEEDVSLIDLAFSKKKADDRKEWLRG 704

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PG  LD     I  S+F+NKELILFSMAD  RSIPS++DG KP QRK+L+  +KRN  
Sbjct: 705  FQPGTFLDPNLTEIPISEFINKELILFSMADNIRSIPSVMDGFKPTQRKVLYGVYKRNLT 764

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQ  GY+ EHS YHHGE SL  TI+ +AQDFVGSNN+N+L+PNG FG+R  GGKD
Sbjct: 765  SEIKVAQLVGYIGEHSGYHHGEASLTQTIISLAQDFVGSNNLNILKPNGGFGSRASGGKD 824

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            A++ARYIFT ++PITR ++   D+ LL+YL +D Q +EP WY+P++P +LVNGSEGIG+G
Sbjct: 825  ASAARYIFTEVTPITRKVYNTLDNPLLNYLQDDEQTVEPQWYVPVLPMILVNGSEGIGSG 884

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            WS+ IP +NP DIV N+R L+NGE M  M PW++G+ GTI +    +    + + G IEE
Sbjct: 885  WSTQIPPFNPVDIVKNIRALMNGEEMVDMIPWFKGWEGTISRIGPDK----FRMEGNIEE 940

Query: 927  VNETTLRIKELPIRRWTQDYREFLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEES 983
            +++TT+ I ELP R WT   +EFL   I   D+   +I+   +      + F V LS+E 
Sbjct: 941  IDDTTVEITELPARMWTITMKEFLLQAIAGSDKQKPWIKDMEE-QHGVGIKFVVTLSKEE 999

Query: 984  MMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKV 1043
            M +T++ GL ++FKL + I+TSNM  FD +G IKKYD   QI+E+++ +RL++Y++RK  
Sbjct: 1000 MEKTRRIGLKERFKLISIINTSNMVAFDPQGRIKKYDHVNQIIEDYYLVRLDYYQRRKDY 1059

Query: 1044 QLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIE--- 1100
              +    +  KL  + +F+  +++ E+ +NN+KR +L+ EL+Q GF  F K++K I    
Sbjct: 1060 MADLFSNQFEKLSYQAKFVKMIIDRELNINNKKRVNLVKELKQLGFPGFDKHNKPIRPTE 1119

Query: 1101 --------AVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRD 1152
                     +   A D T   +E    V+      YDYLL M + +LT E+ + LL  RD
Sbjct: 1120 LKEEDDEEDINELAADPTAVVQEKKTAVSA-----YDYLLGMPLWSLTSERYEKLLKQRD 1174

Query: 1153 KLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIK 1199
            +   E+++L + + + LW +DLD     L+E DK     EE R  +K
Sbjct: 1175 EKEAELNNLLRKSAKDLWNEDLDVF---LEEWDKFLKEDEESRSSMK 1218


>gi|38453823|dbj|BAD02212.1| DNA topoisomerase II [Arthroderma benhamiae]
          Length = 1089

 Score = 1134 bits (2934), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/1129 (51%), Positives = 784/1129 (69%), Gaps = 62/1129 (5%)

Query: 33   KKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAAD 92
            K +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNAAD
Sbjct: 1    KITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNAAD 60

Query: 93   NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN 152
            NKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D 
Sbjct: 61   NKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEQIYIPELIFGHLLTSSNYNDM 120

Query: 153  VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM    +  I++CK GD+
Sbjct: 121  QEKVTGGRNGYGAKLCNIFSNEFTVETADSKQKKKFKLTWTNNMSTMGKAKITECK-GDD 179

Query: 213  WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            +TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+P+KSF +Y++
Sbjct: 180  YTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTAVK--LNGTRIPIKSFKKYME 237

Query: 273  MYPKSVTR---------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            MY K++                   E  + RWEI  T+S+G FQQVSFVN IAT  GGTH
Sbjct: 238  MYTKAIKAERGEDPTSASDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTH 297

Query: 318  VDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT R 
Sbjct: 298  VNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNSQIVNPAFTSQTKEQLTTRP 357

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN
Sbjct: 358  SQFGSKCAVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDAN 415

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+
Sbjct: 416  KAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNA 475

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI NIK  +GL+   EY + + LRYGHLMIMTDQ                          
Sbjct: 476  EIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ-------------------------- 509

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPD 612
              DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++P+
Sbjct: 510  --DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHSKSFFTIPE 567

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            YE WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAF
Sbjct: 568  YEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAF 626

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            SKKK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPG
Sbjct: 627  SKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINKELILFSMADNIRSIPSVVDGLKPG 686

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+
Sbjct: 687  QRKVLYTMFKRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLE 746

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P+G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++
Sbjct: 747  PSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNVDDGKVIEPETYVPVV 806

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ GE + PM PW+RGF G  E T S 
Sbjct: 807  PLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMVGEELVPMKPWFRGFKG--EVTGS- 863

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDD 970
              G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  
Sbjct: 864  --GDRYKFSGIIKQTADNEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYNTH 921

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            T V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  F+
Sbjct: 922  TNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRAFY 981

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++KGF 
Sbjct: 982  AVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQELQEKGFK 1041

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            PFPK   + E   AG  +E E+ EE       V S  YDYLLSM + +L
Sbjct: 1042 PFPKVVGTPEPGEAGDVEEEEDEEEE-TTTAAVSSDAYDYLLSMPLWSL 1089


>gi|393908751|gb|EJD75192.1| DNA topoisomerase 2 [Loa loa]
          Length = 1569

 Score = 1134 bits (2933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1246 (50%), Positives = 833/1246 (66%), Gaps = 98/1246 (7%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQA-LWIYEEESKTMIHRTISYVPGLYKIFD 84
            TIE++YQKKSQLEHILLRPDTYIGS+E   +A +W+Y+ E + ++ R ISYVPGLYKIFD
Sbjct: 75   TIEKIYQKKSQLEHILLRPDTYIGSVEHTDKAPMWVYDAEVERIVQRDISYVPGLYKIFD 134

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDPKM+ +++ I++E + ISV N+G G+PV +H+ E +YVPELIFG LL
Sbjct: 135  EILVNAADNKQRDPKMNLIRININKETNEISVFNNGKGIPVVLHKVEQLYVPELIFGTLL 194

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ +K TGGRNGYGAKL NIFS EF +ET+  +  K +KQ + NNM K  +P +
Sbjct: 195  TSSNYDDSERKVTGGRNGYGAKLCNIFSKEFTVETSSKEYGKAFKQTWKNNMTKDKDPFV 254

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            SK   G+++T V+FKPDL KF M  L+DD+++L+ +R  D+AG   K VKV LNG  +PV
Sbjct: 255  SKSV-GEDFTHVTFKPDLTKFKMIELDDDIISLISRRAYDIAGST-KGVKVYLNGKLLPV 312

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            + F +YV+ Y K             +E+VNERWE+ +T+SE  FQQVSFVN IAT KGG 
Sbjct: 313  QGFKQYVEQYTKHNLDNDGEPYKIAYEQVNERWEVALTVSEKGFQQVSFVNSIATTKGGR 372

Query: 317  HVDYVANQVANHVMAVVNKK--NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            HVDYV +Q+   ++  + KK      NVK   +K+H+W+FVN+L++NP FDSQTKET+TL
Sbjct: 373  HVDYVVDQITAKLIDTIKKKVGKSGVNVKPFQIKSHMWIFVNSLVENPTFDSQTKETMTL 432

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLE 433
            +  +FGSKCE+SE F+  V  K GIVE +L+W  FKQ + L KK    KT  ++GI KLE
Sbjct: 433  QAKNFGSKCEMSERFINAVM-KCGIVEAVLAWVRFKQQETLDKKCSTKKTSKLKGIPKLE 491

Query: 434  DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            DAN AG +NS  CTLILTEGDSAK+LA++GL VVGRDR+GVFPLRGK+LNVRE S  Q++
Sbjct: 492  DANDAGTKNSSLCTLILTEGDSAKSLAVSGLGVVGRDRYGVFPLRGKMLNVREGSHKQIM 551

Query: 494  NNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
             N+EI  + KI+GL+  ++Y+   ++K+LRYG +M+M DQ                    
Sbjct: 552  ENAEINALIKIIGLQYRLKYDKDEDMKTLRYGKIMVMADQ-------------------- 591

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                    D DGSHIKGL+INFIH  WP L++  +F+ EFITPIVKAT K  +  SF+S+
Sbjct: 592  --------DQDGSHIKGLVINFIHYNWPVLIR-RNFVEEFITPIVKAT-KGKESFSFFSL 641

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+Y  W+ +   N  ++ IKYYKGLGTSTSKE KEYF ++  H+  F +  ++D  ++++
Sbjct: 642  PEYAEWRNNTE-NWKTYRIKYYKGLGTSTSKEAKEYFTDMVRHRIRFQYSGEEDDNSLDM 700

Query: 671  AFSKKKIEARKKWLLQF--------EPG---NHLDQKE-KYIKYSDFVNKELILFSMADL 718
            AFSKKKIE RK WL  +        E G    +L  K+ + + + DFVNKEL+LFS AD 
Sbjct: 701  AFSKKKIEDRKVWLTNWMAEKKARREQGLTEEYLYNKDTRAVSFKDFVNKELVLFSNADN 760

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
            +RSIPS+VDGLKPGQRK+LF  FKR   KE KVAQ +G V E SAYHHGE SL STI+ +
Sbjct: 761  ERSIPSLVDGLKPGQRKVLFTCFKRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVNL 820

Query: 779  AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
            AQD+VGSNNINLL P GQFGTR QGGKD+AS RYIFT+L+P+TR LFP  D+ +L +L E
Sbjct: 821  AQDYVGSNNINLLLPIGQFGTRLQGGKDSASPRYIFTQLNPVTRALFPIVDENVLRFLFE 880

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPW 898
            + Q+IEP WY PIIPTVLVNG+EGIGT WS+ IPNYNPR+IV N+RRL+ GE  + + PW
Sbjct: 881  ENQRIEPEWYCPIIPTVLVNGAEGIGTAWSTKIPNYNPREIVDNMRRLIRGEEPKSLTPW 940

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQN 957
            ++ F GTIEK         Y  +G I  +++ T+ I ELPIR WTQ+Y+E  LE +++ +
Sbjct: 941  FKNFRGTIEKLDDSR----YICSGEIALLSDDTIEITELPIRTWTQNYKETVLEPMLEGS 996

Query: 958  DS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
            D     I+ F++Y  DTTV F V ++   +   + EGL K FKL + I+ S+M LFD  G
Sbjct: 997  DKQPPLIQDFKEYHTDTTVKFVVKMNAAKLREAEMEGLHKIFKLQSAINISSMVLFDPLG 1056

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             ++++   E+I +EFF IR + Y +RK  Q   L  +  +L N+ RFIL  + GEI++ N
Sbjct: 1057 CLRRFPNVEEICKEFFEIRKKKYIERKAFQEGMLRAQSERLSNQARFILEKIKGEILIEN 1116

Query: 1075 RKRTDLLLELRQKGFTPFP-------KNSKSIEAVVAGATDE---------TEESEENPE 1118
            +++  ++ +L +KGF P P       +  + +E       D+           ES  +P 
Sbjct: 1117 KRKVAIVEQLVKKGFDPDPVKRWKELQRKRELEMTGEIQVDDEEMEGEIEEESESSVSPV 1176

Query: 1119 VVNGVQSI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            + +  + + DYDYL+ MAI  L+ E+   LL D +   EE+  L   T   LW +DLD  
Sbjct: 1177 MKDLTKKLSDYDYLVGMAILKLSEEEKDKLLRDSELKLEELKSLESKTWSDLWKEDLDNF 1236

Query: 1178 DMQLDELDKSDA--RAEEERMKIKGNGNGDAGPKIVAKRAPKNARK 1221
               L EL+K +A  RA+ E M++K     DA  KI A  A K  RK
Sbjct: 1237 ---LVELEKQEAKERADIE-MQVK-----DAVKKI-AGAATKGGRK 1272


>gi|25006391|dbj|BAC24015.1| DNA topoisomerase II [Epidermophyton floccosum]
          Length = 1091

 Score = 1134 bits (2933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 582/1128 (51%), Positives = 778/1128 (68%), Gaps = 61/1128 (5%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNA
Sbjct: 1    YQKITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNA 60

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ DP M  ++V +D+E   ISV N+G G+PVEIH +E +Y+PELIFGHLLTSSNY+
Sbjct: 61   ADNKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHSKEQIYIPELIFGHLLTSSNYN 120

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  +K TGGRNGYGAKL NIFS EF +ETAD    KK+K  +TNNM    +  IS+ K G
Sbjct: 121  DMQEKVTGGRNGYGAKLCNIFSKEFTVETADSHEKKKFKLTWTNNMSTMGKAKISENK-G 179

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+PVKSF +Y
Sbjct: 180  DDYTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTTVK--LNGTRIPVKSFKKY 237

Query: 271  VDMYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++MY K++                 E  + RWEI  T+S+G FQQVSFVN IAT  GGTH
Sbjct: 238  MEMYTKAIKTERGEDPTSDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTH 297

Query: 318  VDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT R 
Sbjct: 298  VNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNSQIVNPAFTSQTKEQLTTRP 357

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSKC +S++FL+KV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN
Sbjct: 358  SQFGSKCIVSDDFLRKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDAN 415

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG +    CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+
Sbjct: 416  KAGTKEGYHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNA 475

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI NIK  +GL+   EY + + LRYGHLMIMTDQ                          
Sbjct: 476  EIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ-------------------------- 509

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPD 612
              DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++P+
Sbjct: 510  --DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHSKSFFTLPE 567

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            YE WK++   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAF
Sbjct: 568  YEEWKKT-HAHDKRWQKKYYKGLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAF 626

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            SKKK + RK+WL QF+PG +LD    +I Y+DF+NKELILFSMAD  RSIPS+VDGLKPG
Sbjct: 627  SKKKADERKEWLRQFKPGTYLDHSTDHITYTDFINKELILFSMADNIRSIPSVVDGLKPG 686

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+
Sbjct: 687  QRKVLYTMFKRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLE 746

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P+G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++
Sbjct: 747  PSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNVDDGKVIEPETYVPVV 806

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P +L+NG++GIGTGWS+ IPNYNP D+V N++RL+ GE + PM PW+RGF G  E T S 
Sbjct: 807  PLILINGADGIGTGWSTSIPNYNPEDVVDNLKRLMAGEELVPMKPWFRGFKG--EVTGS- 863

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDD 970
              G  Y  +GII++  ++ + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  
Sbjct: 864  --GDRYKFSGIIKQTGDSEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYNTH 921

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            T V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  F+
Sbjct: 922  TNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRAFY 981

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +R++ YEKRK+  L  L+  L KL N+ RF+  +++G++V++ +K+  L+ EL++KGF 
Sbjct: 982  AVRIKLYEKRKQYLLSELQTRLDKLSNQARFVQMIIDGKLVISKKKKALLIQELQEKGFK 1041

Query: 1091 PFPK--NSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAI 1136
            PFPK  +++          DE EE        + + S  YDYLLSM +
Sbjct: 1042 PFPKVVDNREPGEASDVEEDEDEEEVVEEAETSALSSDAYDYLLSMPM 1089


>gi|312069494|ref|XP_003137708.1| TOPoisomerase family member [Loa loa]
          Length = 1485

 Score = 1133 bits (2930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 620/1245 (49%), Positives = 831/1245 (66%), Gaps = 96/1245 (7%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQA-LWIYEEESKTMIHRTISYVPGLYKIFD 84
            TIE++YQKKSQLEHILLRPDTYIGS+E   +A +W+Y+ E + ++ R ISYVPGLYKIFD
Sbjct: 75   TIEKIYQKKSQLEHILLRPDTYIGSVEHTDKAPMWVYDAEVERIVQRDISYVPGLYKIFD 134

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDPKM+ +++ I++E + ISV N+G G+PV +H+ E +YVPELIFG LL
Sbjct: 135  EILVNAADNKQRDPKMNLIRININKETNEISVFNNGKGIPVVLHKVEQLYVPELIFGTLL 194

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ +K TGGRNGYGAKL NIFS EF +ET+  +  K +KQ + NNM K  +P +
Sbjct: 195  TSSNYDDSERKVTGGRNGYGAKLCNIFSKEFTVETSSKEYGKAFKQTWKNNMTKDKDPFV 254

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            SK   G+++T V+FKPDL KF M  L+DD+++L+ +R  D+AG   K VKV LNG  +PV
Sbjct: 255  SKSV-GEDFTHVTFKPDLTKFKMIELDDDIISLISRRAYDIAGST-KGVKVYLNGKLLPV 312

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            + F +YV+ Y K             +E+VNERWE+ +T+SE  FQQVSFVN IAT KGG 
Sbjct: 313  QGFKQYVEQYTKHNLDNDGEPYKIAYEQVNERWEVALTVSEKGFQQVSFVNSIATTKGGR 372

Query: 317  HVDYVANQVANHVMAVVNKK--NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            HVDYV +Q+   ++  + KK      NVK   +K+H+W+FVN+L++NP FDSQTKET+TL
Sbjct: 373  HVDYVVDQITAKLIDTIKKKVGKSGVNVKPFQIKSHMWIFVNSLVENPTFDSQTKETMTL 432

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLE 433
            +  +FGSKCE+SE F+  V  K GIVE +L+W  FKQ + L KK    KT  ++GI KLE
Sbjct: 433  QAKNFGSKCEMSERFINAVM-KCGIVEAVLAWVRFKQQETLDKKCSTKKTSKLKGIPKLE 491

Query: 434  DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            DAN AG +NS  CTLILTEGDSAK+LA++GL VVGRDR+GVFPLRGK+LNVRE S  Q++
Sbjct: 492  DANDAGTKNSSLCTLILTEGDSAKSLAVSGLGVVGRDRYGVFPLRGKMLNVREGSHKQIM 551

Query: 494  NNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
             N+EI  + KI+GL+  ++Y+   ++K+LRYG +M+M DQ                    
Sbjct: 552  ENAEINALIKIIGLQYRLKYDKDEDMKTLRYGKIMVMADQ-------------------- 591

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                    D DGSHIKGL+INFIH  WP L++  +F+ EFITPIVKAT K  +  SF+S+
Sbjct: 592  --------DQDGSHIKGLVINFIHYNWPVLIR-RNFVEEFITPIVKAT-KGKESFSFFSL 641

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+Y  W+ +   N  ++ IKYYKGLGTSTSKE KEYF ++  H+  F +  ++D  ++++
Sbjct: 642  PEYAEWRNNTE-NWKTYRIKYYKGLGTSTSKEAKEYFTDMVRHRIRFQYSGEEDDNSLDM 700

Query: 671  AFSKKKIEARKKWLLQF--------EPG---NHLDQKE-KYIKYSDFVNKELILFSMADL 718
            AFSKKKIE RK WL  +        E G    +L  K+ + + + DFVNKEL+LFS AD 
Sbjct: 701  AFSKKKIEDRKVWLTNWMAEKKARREQGLTEEYLYNKDTRAVSFKDFVNKELVLFSNADN 760

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
            +RSIPS+VDGLKPGQRK+LF  FKR   KE KVAQ +G V E SAYHHGE SL STI+ +
Sbjct: 761  ERSIPSLVDGLKPGQRKVLFTCFKRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVNL 820

Query: 779  AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
            AQD+VGSNNINLL P GQFGTR QGGKD+AS RYIFT+L+P+TR LFP  D+ +L +L E
Sbjct: 821  AQDYVGSNNINLLLPIGQFGTRLQGGKDSASPRYIFTQLNPVTRALFPIVDENVLRFLFE 880

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPW 898
            + Q+IEP WY PIIPTVLVNG+EGIGT WS+ IPNYNPR+IV N+RRL+ GE  + + PW
Sbjct: 881  ENQRIEPEWYCPIIPTVLVNGAEGIGTAWSTKIPNYNPREIVDNMRRLIRGEEPKSLTPW 940

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQN 957
            ++ F GTIEK         Y  +G I  +++ T+ I ELPIR WTQ+Y+E  LE +++ +
Sbjct: 941  FKNFRGTIEKLDDSR----YICSGEIALLSDDTIEITELPIRTWTQNYKETVLEPMLEGS 996

Query: 958  DS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
            D     I+ F++Y  DTTV F V ++   +   + EGL K FKL + I+ S+M LFD  G
Sbjct: 997  DKQPPLIQDFKEYHTDTTVKFVVKMNAAKLREAEMEGLHKIFKLQSAINISSMVLFDPLG 1056

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             ++++   E+I +EFF IR + Y +RK  Q   L  +  +L N+ RFIL  + GEI++ N
Sbjct: 1057 CLRRFPNVEEICKEFFEIRKKKYIERKAFQEGMLRAQSERLSNQARFILEKIKGEILIEN 1116

Query: 1075 RKRTDLLLELRQKGFTPFP-------KNSKSIEAVVAGATDE---------TEESEENPE 1118
            +++  ++ +L +KGF P P       +  + +E       D+           ES  +P 
Sbjct: 1117 KRKVAIVEQLVKKGFDPDPVKRWKELQRKRELEMTGEIQVDDEEMEGEIEEESESSVSPV 1176

Query: 1119 VVNGVQSI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            + +  + + DYDYL+ MAI  L+ E+   LL D +   EE+  L   T   LW +DLD  
Sbjct: 1177 MKDLTKKLSDYDYLVGMAILKLSEEEKDKLLRDSELKLEELKSLESKTWSDLWKEDLDNF 1236

Query: 1178 DMQLDELDKSDARAEEE-RMKIKGNGNGDAGPKIVAKRAPKNARK 1221
               L EL+K +A+   +  M++K     DA  KI A  A K  RK
Sbjct: 1237 ---LVELEKQEAKERADIEMQVK-----DAVKKI-AGAATKGGRK 1272


>gi|38453821|dbj|BAD02211.1| DNA topoisomerase II [Arthroderma benhamiae]
          Length = 1089

 Score = 1133 bits (2930), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/1129 (51%), Positives = 783/1129 (69%), Gaps = 62/1129 (5%)

Query: 33   KKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAAD 92
            K +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNAAD
Sbjct: 1    KITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNAAD 60

Query: 93   NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN 152
            NKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D 
Sbjct: 61   NKQNDPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEQIYIPELIFGHLLTSSNYNDM 120

Query: 153  VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM    +  I++CK GD+
Sbjct: 121  QEKVTGGRNGYGAKLCNIFSNEFTVETADSKQKKKFKLTWTNNMSTMGKAKITECK-GDD 179

Query: 213  WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            +TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R P+KSF +Y++
Sbjct: 180  YTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTAVK--LNGTRTPIKSFKKYME 237

Query: 273  MYPKSVTR---------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            MY K++                   E  + RWEI  T+S+G FQQVSFVN IAT  GGTH
Sbjct: 238  MYTKAIKAERGEDPTSASDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTH 297

Query: 318  VDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT R 
Sbjct: 298  VNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNSQIVNPAFTSQTKEQLTTRP 357

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN
Sbjct: 358  SQFGSKCVVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDAN 415

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+
Sbjct: 416  KAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNA 475

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI NIK  +GL+   EY + + LRYGHLMIMTDQ                          
Sbjct: 476  EIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ-------------------------- 509

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPD 612
              DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++P+
Sbjct: 510  --DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHSKSFFTIPE 567

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            YE WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAF
Sbjct: 568  YEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAF 626

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            SKKK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPG
Sbjct: 627  SKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINKELILFSMADNIRSIPSVVDGLKPG 686

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+
Sbjct: 687  QRKVLYTMFKRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLE 746

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P+G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++
Sbjct: 747  PSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNVDDGKVIEPETYVPVV 806

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ GE + PM PW+RGF G  E T S 
Sbjct: 807  PLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMVGEELVPMKPWFRGFKG--EVTGS- 863

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDD 970
              G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  
Sbjct: 864  --GDRYKFSGIIKQTADNEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYNTH 921

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            T V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  F+
Sbjct: 922  TNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRAFY 981

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++KGF 
Sbjct: 982  AVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQELQEKGFK 1041

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            PFPK   + E   AG  +E E+ EE       V S  YDYLLSM + +L
Sbjct: 1042 PFPKVVGTPEPGEAGDVEEEEDEEEE-TTTAAVSSDAYDYLLSMPLWSL 1089


>gi|367000283|ref|XP_003684877.1| hypothetical protein TPHA_0C02900 [Tetrapisispora phaffii CBS 4417]
 gi|357523174|emb|CCE62443.1| hypothetical protein TPHA_0C02900 [Tetrapisispora phaffii CBS 4417]
          Length = 1422

 Score = 1132 bits (2929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/1213 (49%), Positives = 804/1213 (66%), Gaps = 74/1213 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K+  E YQK SQLEHIL RPDTYIGS+E   Q  WIY+ E   MI + ++ VPGL+KIFD
Sbjct: 6    KSASERYQKISQLEHILKRPDTYIGSVEIQEQEQWIYDNELDCMIEKPVNIVPGLFKIFD 65

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RD  M  + V I+ E + ISV N G G+PVEIH++E +Y+PELIFGHLL
Sbjct: 66   EILVNAADNKVRDKNMKRIDVDINAEENTISVRNDGRGIPVEIHEKEQIYIPELIFGHLL 125

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ KK TGGRNGYGAKL NIFSTEFI+ETAD K  KKY Q + NNM     P I
Sbjct: 126  TSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETADSKHAKKYVQKWENNMTTCHPPTI 185

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +  K+G ++TKV+FKPDL +FNM  L+DD++ +M++RV D+ G + + + V LNG+ + +
Sbjct: 186  TTYKKGPSYTKVTFKPDLKRFNMEKLDDDILGVMRRRVYDINGSV-RDINVYLNGNHLKI 244

Query: 265  KSFAEYVDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSF 305
            K+F  Y+++Y KS+                   T  +ER+N+RWE+    S+  FQQVSF
Sbjct: 245  KTFKNYIELYLKSLEKKRQIDNGEDASVQANIPTILYERINDRWEVGFAASDISFQQVSF 304

Query: 306  VNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKA-HNVKNHLWVFVNALIDNPAF 364
            VN IAT  GGTHV+Y+A+Q+   V  V+ KK  N        +KN++++F+NAL++NPAF
Sbjct: 305  VNSIATTTGGTHVNYIADQIVRKVGEVLKKKKNNKKNVKPFQIKNNMFIFINALVENPAF 364

Query: 365  DSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTE 424
             SQTKE LT R   FGS+CE+  +F+ K+  K+     +   A+   +  LKK+DG++  
Sbjct: 365  TSQTKEQLTTRVKDFGSRCEVGADFITKI-MKTDFATKIYEIADANDTNALKKSDGSRKS 423

Query: 425  DVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNV 484
             +    KLEDAN AG +   +CTLILTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNV
Sbjct: 424  RITEYPKLEDANKAGTKEGYKCTLILTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNV 483

Query: 485  REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            REAS++Q+L N+EI  IKKI+GL+   +Y +  SLRYGHLMIMTDQ              
Sbjct: 484  REASADQILKNAEIQAIKKIMGLQHKKKYEDASSLRYGHLMIMTDQ-------------- 529

Query: 545  IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT--NKNG 602
                          DHDGSHIKGL+INF+ S +P LL IP FLVEFITPI+K T    + 
Sbjct: 530  --------------DHDGSHIKGLIINFLESSFPGLLDIPEFLVEFITPIIKVTITKPHR 575

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            + +SFY+MPDYE W+E       +W  KYYKGLGTS+ +E +EYF ++  H K F   + 
Sbjct: 576  EQISFYNMPDYERWREE-ESQKYTWKQKYYKGLGTSSGQEVREYFADLDTHLKKFHALEG 634

Query: 663  QDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
             D + IELAFSKKK + RK+WL  +EPG  LD   K I  SDF+NKELILFS+AD  RSI
Sbjct: 635  NDKDLIELAFSKKKADDRKEWLRLYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSI 694

Query: 723  PSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDF 782
            PS++DGLKPGQRK+++  FKRN + E KVAQ + YVSE +AYHHGEQSLA TI+ +AQ+F
Sbjct: 695  PSVLDGLKPGQRKVMYGCFKRNLVSEIKVAQLAPYVSECTAYHHGEQSLAQTIISLAQNF 754

Query: 783  VGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQ 842
            VG++NI LL+PNG FGTR  GGKDAA+ARYI+T+LS ITR +F   DD L  Y+ ED + 
Sbjct: 755  VGASNIYLLKPNGAFGTRATGGKDAAAARYIYTQLSKITRKIFHPSDDTLYKYVQEDEKT 814

Query: 843  IEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGF 902
            +EP WY+PI+P VLVNG+EGIGTGWS+ IP +NP+DI+ N++ L+NGE ME MHPW+RG+
Sbjct: 815  VEPEWYLPILPMVLVNGTEGIGTGWSTSIPPFNPKDIIKNLKHLMNGEEMEEMHPWFRGW 874

Query: 903  GGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND---S 959
             G++E+   +     Y + G IE+   TTL I ELP R WT   +E+L   +  ND   +
Sbjct: 875  TGSLERIDPQR----YRLFGKIEQTGPTTLEITELPARVWTSTIKEYLLLGLSGNDKTKA 930

Query: 960  FIRGF-RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKK 1018
            +I+    Q+SD   + F + L+ E M +T++ G   +FKL ++IS +NM  FD  G IKK
Sbjct: 931  WIKDMEEQHSD--AIKFIIKLTPEEMSKTRKIGFYDRFKLVSSISLNNMVAFDPHGKIKK 988

Query: 1019 YDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRT 1078
            Y+TP++IL+EF+++RLE+Y+KRK    E L+  L K+  +V+FI  +++ E++V N+ + 
Sbjct: 989  YETPQEILQEFYYVRLEYYQKRKDYMCERLQWVLEKISYQVKFIKMIIDRELIVTNKPKK 1048

Query: 1079 DLLLELRQKGFTPFPKNSKSIEAVVAGATDE------TEESEEN---PEVVNGV--QSID 1127
             ++ EL + GF    K  K     +   ++E       EES++N     +VNG   Q  +
Sbjct: 1049 LVIKELTELGFPRINKIGKPFYGEIKEESEEGIEDVSDEESDQNGNDDSLVNGPEEQYGN 1108

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKS 1187
            YDYLL M I +LT E+ + L   + +   E+++L K + + LWV DLDA D   +     
Sbjct: 1109 YDYLLGMKIWSLTKERYEKLSQQKKEKEIELEELLKLSAQDLWVIDLDAFDEAYETFMAD 1168

Query: 1188 DARAEEERMKIKG 1200
            DA A  +    KG
Sbjct: 1169 DAFARNDDKSGKG 1181


>gi|50305715|ref|XP_452818.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641951|emb|CAH01669.1| KLLA0C13838p [Kluyveromyces lactis]
          Length = 1435

 Score = 1132 bits (2928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 590/1201 (49%), Positives = 778/1201 (64%), Gaps = 86/1201 (7%)

Query: 24   NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
            +KT+ E YQK SQLEHIL RPDTYIGS+E      WI++E +  MI +T++ VPGL+KIF
Sbjct: 4    SKTVSERYQKISQLEHILKRPDTYIGSVEVQESQQWIHDETTDCMIEKTVNIVPGLFKIF 63

Query: 84   DEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            DEILVNAADNK RDP M  + VVI+QE + I V N G G+PVEIH +EG+Y+PELIFGHL
Sbjct: 64   DEILVNAADNKVRDPSMKKIDVVINQEENTIEVKNDGKGIPVEIHDKEGIYIPELIFGHL 123

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LTSSNYDD+ KK TGGRNGYGAKL NIFSTEFI+ETAD  R  KY Q + NNM     P 
Sbjct: 124  LTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETADPSRGHKYIQNWENNMSTCHPPK 183

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            I+  K+G ++TKV FKPDL +F M  L+DD+V +M++RV D+ G + + V V LNG  + 
Sbjct: 184  ITSYKKGPSYTKVIFKPDLQRFGMDKLDDDIVGVMRRRVYDINGSV-RDVNVSLNGKALK 242

Query: 264  VKSFAEYVDMYPKSV-------------------------TRFHERVNERWEICVTLSEG 298
            +++F  YV++Y KS+                         T  +ER+N+RWE+   +SE 
Sbjct: 243  IRNFKNYVELYLKSLEKIKLNRLRESSTPDEPMQEPTKIPTILYERINDRWEVAFAVSEN 302

Query: 299  QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNAL 358
             FQQ+SFVN IAT  GGTHV+YV +Q+   V   + K+ K   +K   +KN++++F+N L
Sbjct: 303  SFQQISFVNSIATTSGGTHVNYVTDQIIKKVSDRLKKQKKT--IKPFQIKNNMFIFINCL 360

Query: 359  IDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN 418
            I+NPAF SQTKE LT R   FGSKCE+  EF+ K+  K+ +   +   A+    K LKK 
Sbjct: 361  IENPAFTSQTKEQLTTRVKDFGSKCEVPSEFINKI-MKTDLATKIFEIADENAHKQLKKT 419

Query: 419  DGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLR 478
            DG++   +    KLEDAN+AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G FPLR
Sbjct: 420  DGSRKNRITEYPKLEDANMAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCFPLR 479

Query: 479  GKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSF 538
            GK+LNVREA+ +Q+  N+EI  IKKI+GL+    Y +  +LRYGH+MIMTDQ        
Sbjct: 480  GKMLNVREATPDQISKNAEIQAIKKIMGLQHKKRYEDTTTLRYGHIMIMTDQ-------- 531

Query: 539  LLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT 598
                                DHDGSHIKGL+INF+ S +P LL IP FL+EFITPI+K T
Sbjct: 532  --------------------DHDGSHIKGLIINFLESSFPGLLDIPGFLIEFITPIIKIT 571

Query: 599  NKNGK--VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKD 656
                K   +SFY+MPDYE W+E    +  +W  KYYKGLGTST +E +EYF  +  H K 
Sbjct: 572  ISRPKKETISFYNMPDYEKWREE-ESHKYTWKQKYYKGLGTSTQQEAREYFSGLDKHLKK 630

Query: 657  FVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMA 716
            F      D + I+LAFSKKK + RK+WL  +EPG  LD K   I  SDF+NKELILFS+A
Sbjct: 631  FHALQGDDSQLIDLAFSKKKADDRKEWLKLYEPGTVLDPKLTEIPISDFINKELILFSLA 690

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D  RSIPS++DGLKPGQRK+++  FKRN   E KVAQ  GYVSEH+ YHHGEQSL  TI+
Sbjct: 691  DNIRSIPSVLDGLKPGQRKVIYACFKRNLKSEIKVAQLGGYVSEHTGYHHGEQSLYQTIV 750

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
            G+AQDFVGSNNI LL+PNG FGTR  GGKD+A+ RYIFT L+ +TR +F   DD LL+Y+
Sbjct: 751  GLAQDFVGSNNIYLLKPNGAFGTRATGGKDSAAPRYIFTELNKLTRKIFNTLDDPLLNYI 810

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +D Q +EP WY+P+IP VLVNG+EGIGTGWS+ IP +NP DIV NV+RL+ GE ME M 
Sbjct: 811  QDDEQTVEPEWYLPVIPMVLVNGTEGIGTGWSTNIPPFNPMDIVNNVKRLMKGEEMEQMA 870

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ 956
            PWYRG+ G++EK   ++    Y   G IE+++E TL I ELP + WT   +E L   +  
Sbjct: 871  PWYRGWQGSLEKIDPQK----YRTYGRIEQIDENTLEITELPPKTWTSVIKEHLLLGLSG 926

Query: 957  NDSFIRGFR--QYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
            ND      +  Q     T+ F + L+ + M +T++ G  ++FKL +T+S SNM  FD +G
Sbjct: 927  NDKVKPWIKDIQEQHGATIKFIITLTSDEMEKTRKIGFYERFKLVSTVSLSNMVAFDPQG 986

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             IKKYD    IL +F++ RL +Y+KRK    E L+ E+ KL  +V+FI+ +V  ++ V+N
Sbjct: 987  KIKKYDDVRDILSDFYYTRLTYYQKRKDYIGERLKWEVEKLSYQVKFIMMIVEKKLSVSN 1046

Query: 1075 RKRTDLLLELRQKGFTPFPKNSK----------SIEAV--------VAGATDETEESEEN 1116
            + R  L  EL   GF    K  K           IEA+            ++  + +EE+
Sbjct: 1047 KPRPVLFEELMSLGFPRINKEGKPTYGKVEEQAQIEALNDEDDDDDDEEKSEAEDNAEES 1106

Query: 1117 PEVVNGVQSI--DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDL 1174
             +VVNG +    +YDYLL M I  LT E+ + L+    +   E++ L K + + LW  DL
Sbjct: 1107 EDVVNGPEEKFGNYDYLLGMKIWALTKERYEKLMKQMQEKQTELERLLKLSAKDLWEIDL 1166

Query: 1175 D 1175
            D
Sbjct: 1167 D 1167


>gi|38453825|dbj|BAD02213.1| DNA topoisomerase II [Arthroderma benhamiae]
          Length = 1089

 Score = 1132 bits (2927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/1129 (51%), Positives = 783/1129 (69%), Gaps = 62/1129 (5%)

Query: 33   KKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAAD 92
            K +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNAAD
Sbjct: 1    KITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNAAD 60

Query: 93   NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN 152
            NKQ DP M  ++V +D++   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D 
Sbjct: 61   NKQNDPNMSEIRVTLDKQAGEISVWNNGRGIPVEIHKKEQIYIPELIFGHLLTSSNYNDM 120

Query: 153  VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM    +  I++CK GD+
Sbjct: 121  QEKVTGGRNGYGAKLCNIFSNEFTVETADSKQKKKFKLTWTNNMSTMGKAKITECK-GDD 179

Query: 213  WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            +TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+P+KSF +Y++
Sbjct: 180  YTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTAVK--LNGTRIPIKSFKKYME 237

Query: 273  MYPKSVTR---------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            MY K++                   E  + RWEI  T+S+G FQQVSFVN IAT  GGTH
Sbjct: 238  MYTKAIKAERGEDPTSASDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTH 297

Query: 318  VDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT R 
Sbjct: 298  VNYISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNSQIVNPAFTSQTKEQLTTRP 357

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN
Sbjct: 358  SQFGSKCVVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDAN 415

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG ++   CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+
Sbjct: 416  KAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNA 475

Query: 497  EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
            EI NIK  +GL+   EY + + LRYGHLMIMTDQ                          
Sbjct: 476  EIQNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ-------------------------- 509

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPD 612
              DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++P+
Sbjct: 510  --DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHSKSFFTIPE 567

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            YE WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAF
Sbjct: 568  YEEWKEA-HAHDKKWQKKYYKGLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAF 626

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            SKKK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPG
Sbjct: 627  SKKKADERKEWLRQFKPGTYLDHSTDQITYTDFINKELILFSMADNIRSIPSVVDGLKPG 686

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+
Sbjct: 687  QRKVLYTMFKRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLE 746

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P+G FG+R QGG D+ASARYI+TRLSP  R LF   D+ LL    +DG+ IEP  Y+P++
Sbjct: 747  PSGNFGSRLQGGSDSASARYIYTRLSPFARRLFHPADEPLLVNNVDDGKVIEPETYVPVV 806

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P +L+NG++GIGTGWS+ IPNYNP ++V N++RL+ GE + PM PW+RGF G  E T S 
Sbjct: 807  PLILINGADGIGTGWSTSIPNYNPEEVVDNLKRLMVGEELVPMKPWFRGFKG--EVTGS- 863

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDD 970
              G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  
Sbjct: 864  --GDRYKFSGIIKQTADNEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYNTH 921

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            T V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  F+
Sbjct: 922  TNVHFIIQMEEKHMKKALEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRAFY 981

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++KGF 
Sbjct: 982  AVRIKLYEKRKQYLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKAVLIQELQEKGFK 1041

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            PFPK   + E   AG  +E E+ EE       V S  YDYLLSM + +L
Sbjct: 1042 PFPKVVGTPEPGEAGDVEEEEDEEEE-TTTAAVSSDAYDYLLSMPLWSL 1089


>gi|169606618|ref|XP_001796729.1| hypothetical protein SNOG_06355 [Phaeosphaeria nodorum SN15]
 gi|111065066|gb|EAT86186.1| hypothetical protein SNOG_06355 [Phaeosphaeria nodorum SN15]
          Length = 1705

 Score = 1131 bits (2925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/1184 (49%), Positives = 790/1184 (66%), Gaps = 72/1184 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQ  + LEHI+ RPDTYIGS+E+ T  +W+Y   +++M +R +SYVPGLYKIFDEILVNA
Sbjct: 134  YQMLTHLEHIMKRPDTYIGSVERQTDKMWVYNSTTESMEYRDVSYVPGLYKIFDEILVNA 193

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ D  M  ++V +D+E   +S+ N G G+P+E+H E G+YVPE+IFGHLLTSSNYD
Sbjct: 194  ADNKQNDKNMSEIRVTVDRESGEVSILNDGKGIPIEVHAEHGIYVPEMIFGHLLTSSNYD 253

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            DN +K TGGRNGYGAKL N+FS EF +ET D K+ KKY+Q +T NM    +  I+  K G
Sbjct: 254  DNQQKVTGGRNGYGAKLCNVFSKEFTVETVDSKQKKKYRQTWTENMSVMGKAKITDFKSG 313

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++TK+S+K D  +F M  ++DD  AL+K+R  D+AG L + +KV LN  RV V SFA+Y
Sbjct: 314  DDYTKISWKADYKRFGMDGIDDDFEALIKRRTYDMAGTL-RGIKVYLNKERVKVTSFAKY 372

Query: 271  VDMYPKSVTRFHERVN---------------ERWEICVTLSEGQFQQVSFVNGIATIKGG 315
            ++MY K++ R  E+ N               +RW+I   +S+G F QVSFVN IAT  GG
Sbjct: 373  MEMYTKAIAR--EQGNNEDDKQKDVIITDKHDRWDIGFAVSDGSFNQVSFVNSIATTSGG 430

Query: 316  THVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            THV+Y+++Q+   +MAV+ K      +K   +KNH+++FVN  I NPAF SQTKE LT +
Sbjct: 431  THVNYISDQIVEKLMAVMKKNKAAVKLKPAQIKNHIFLFVNCSIVNPAFTSQTKEQLTTK 490

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDA 435
             S FGSK  L+++FLK +  K+ +++ ++ +A     K LKK DG K   +   +KL DA
Sbjct: 491  ASQFGSKPVLTDKFLKAI-EKTEVIQNIMHFAQQTADKMLKKTDGNKRNRINN-AKLTDA 548

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG ++   CTLILTEG+SA  LA+AG +VV +D FGVFPLRGKLLNVR+AS +Q+L N
Sbjct: 549  NKAGTKDGHLCTLILTEGESASVLALAGRAVVNQDLFGVFPLRGKLLNVRDASVDQILKN 608

Query: 496  SEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
             EI NIKK +GL+   +Y   ++K LRYGHLMIMTDQ                       
Sbjct: 609  QEIQNIKKFMGLQHKKDYTVADMKGLRYGHLMIMTDQ----------------------- 645

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYS 609
                 DHDGSHIKGLLINF+   +PSLL+IP FL+EFITPIVK    + K    + SF+S
Sbjct: 646  -----DHDGSHIKGLLINFLQCQFPSLLRIPGFLLEFITPIVKVWKGDPKHPRSLKSFFS 700

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MP+YE WKE        W  KY+KGLGTS   + + YF+++  H K F     ++ + IE
Sbjct: 701  MPEYEEWKEQHKLE-KGWDHKYFKGLGTSDIPDAQVYFKDLDTHMKRFQVMRAEEEKLIE 759

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKKK +ARK+WL  F PGNHLD     I Y DFVNKE ILFS+AD  RSIPS++DGL
Sbjct: 760  LAFSKKKADARKEWLGNFVPGNHLDLTTPEISYDDFVNKEFILFSIADNLRSIPSVMDGL 819

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+L+  F+RN  K+ KV + +G VS  + Y HGE S+  TI+G+AQ+FVGSNNIN
Sbjct: 820  KPGQRKVLYTCFRRNIKKDVKVVELAGSVSGSTDYAHGEASMQGTIVGLAQNFVGSNNIN 879

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
             L+P+G FG+R +GG DAASARYI+TRLSP  R LF   DD LL Y   DG +IEP  ++
Sbjct: 880  YLEPSGNFGSRLRGGADAASARYIYTRLSPFARRLFHAHDDALLKYGESDGHKIEPEMFI 939

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVR-RLLNG---EMMEPMHPWYRGFGGT 905
            P++PT+LVNGS GIGTGWSS IPN+NP DI+ N+R RL +G   E M+PM PWY+GF GT
Sbjct: 940  PVLPTILVNGSSGIGTGWSSEIPNFNPMDIIDNIRIRLQDGASKEDMKPMTPWYKGFTGT 999

Query: 906  IEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRG 963
             E  A+      +  TG I +  E  L + ELP+R WTQD++E LE II  ++  +FI+ 
Sbjct: 1000 TETLAADR----FQFTGTIRQTGENELEVTELPVRYWTQDFKEKLEDIIKAEKTPAFIKD 1055

Query: 964  FRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPE 1023
            +  Y+    V F + + ++ M+   Q+GL + FKL +  STSN+  FD++G I KY +  
Sbjct: 1056 YIDYNTPDRVHFIIKMEDKHMLNAVQKGLEETFKLYSKQSTSNLVAFDAQGRIHKYASVL 1115

Query: 1024 QILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLE 1083
             I+EEF+H+RL +YEKRK+ QLE +E EL ++ N+ RFI  ++ G++VV+ +K+  L+ E
Sbjct: 1116 DIMEEFYHVRLRYYEKRKQHQLEVMEKELSRMNNQARFIQMIIEGKLVVSKKKKAVLVAE 1175

Query: 1084 LRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEK 1143
            LR+  FTPF   SK+ +A  AG T++ +E +E+ E    + + DYDYLL MAI +LT E+
Sbjct: 1176 LRKLNFTPF---SKAEDAKKAGETEDVQEEDEDEETELEISASDYDYLLGMAIWSLTQER 1232

Query: 1144 VQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDE 1183
            V+ L        EEVD L K +P+ +W  DLDA     ++QL+E
Sbjct: 1233 VEKLRKQIGDKEEEVDTLIKLSPKDIWNVDLDAFVDEWNLQLEE 1276


>gi|393908752|gb|EJD75193.1| DNA topoisomerase 2, variant [Loa loa]
          Length = 1352

 Score = 1131 bits (2925), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/1246 (50%), Positives = 833/1246 (66%), Gaps = 98/1246 (7%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQA-LWIYEEESKTMIHRTISYVPGLYKIFD 84
            TIE++YQKKSQLEHILLRPDTYIGS+E   +A +W+Y+ E + ++ R ISYVPGLYKIFD
Sbjct: 75   TIEKIYQKKSQLEHILLRPDTYIGSVEHTDKAPMWVYDAEVERIVQRDISYVPGLYKIFD 134

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDPKM+ +++ I++E + ISV N+G G+PV +H+ E +YVPELIFG LL
Sbjct: 135  EILVNAADNKQRDPKMNLIRININKETNEISVFNNGKGIPVVLHKVEQLYVPELIFGTLL 194

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ +K TGGRNGYGAKL NIFS EF +ET+  +  K +KQ + NNM K  +P +
Sbjct: 195  TSSNYDDSERKVTGGRNGYGAKLCNIFSKEFTVETSSKEYGKAFKQTWKNNMTKDKDPFV 254

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            SK   G+++T V+FKPDL KF M  L+DD+++L+ +R  D+AG   K VKV LNG  +PV
Sbjct: 255  SKSV-GEDFTHVTFKPDLTKFKMIELDDDIISLISRRAYDIAGST-KGVKVYLNGKLLPV 312

Query: 265  KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            + F +YV+ Y K             +E+VNERWE+ +T+SE  FQQVSFVN IAT KGG 
Sbjct: 313  QGFKQYVEQYTKHNLDNDGEPYKIAYEQVNERWEVALTVSEKGFQQVSFVNSIATTKGGR 372

Query: 317  HVDYVANQVANHVMAVVNKK--NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            HVDYV +Q+   ++  + KK      NVK   +K+H+W+FVN+L++NP FDSQTKET+TL
Sbjct: 373  HVDYVVDQITAKLIDTIKKKVGKSGVNVKPFQIKSHMWIFVNSLVENPTFDSQTKETMTL 432

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLE 433
            +  +FGSKCE+SE F+  V  K GIVE +L+W  FKQ + L KK    KT  ++GI KLE
Sbjct: 433  QAKNFGSKCEMSERFINAVM-KCGIVEAVLAWVRFKQQETLDKKCSTKKTSKLKGIPKLE 491

Query: 434  DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            DAN AG +NS  CTLILTEGDSAK+LA++GL VVGRDR+GVFPLRGK+LNVRE S  Q++
Sbjct: 492  DANDAGTKNSSLCTLILTEGDSAKSLAVSGLGVVGRDRYGVFPLRGKMLNVREGSHKQIM 551

Query: 494  NNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
             N+EI  + KI+GL+  ++Y+   ++K+LRYG +M+M D                     
Sbjct: 552  ENAEINALIKIIGLQYRLKYDKDEDMKTLRYGKIMVMAD--------------------- 590

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                   QD DGSHIKGL+INFIH  WP L++  +F+ EFITPIVKAT K  +  SF+S+
Sbjct: 591  -------QDQDGSHIKGLVINFIHYNWPVLIR-RNFVEEFITPIVKAT-KGKESFSFFSL 641

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+Y  W+ +   N  ++ IKYYKGLGTSTSKE KEYF ++  H+  F +  ++D  ++++
Sbjct: 642  PEYAEWRNNT-ENWKTYRIKYYKGLGTSTSKEAKEYFTDMVRHRIRFQYSGEEDDNSLDM 700

Query: 671  AFSKKKIEARKKWLLQF--------EPG---NHLDQKE-KYIKYSDFVNKELILFSMADL 718
            AFSKKKIE RK WL  +        E G    +L  K+ + + + DFVNKEL+LFS AD 
Sbjct: 701  AFSKKKIEDRKVWLTNWMAEKKARREQGLTEEYLYNKDTRAVSFKDFVNKELVLFSNADN 760

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
            +RSIPS+VDGLKPGQRK+LF  FKR   KE KVAQ +G V E SAYHHGE SL STI+ +
Sbjct: 761  ERSIPSLVDGLKPGQRKVLFTCFKRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVNL 820

Query: 779  AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
            AQD+VGSNNINLL P GQFGTR QGGKD+AS RYIFT+L+P+TR LFP  D+ +L +L E
Sbjct: 821  AQDYVGSNNINLLLPIGQFGTRLQGGKDSASPRYIFTQLNPVTRALFPIVDENVLRFLFE 880

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPW 898
            + Q+IEP WY PIIPTVLVNG+EGIGT WS+ IPNYNPR+IV N+RRL+ GE  + + PW
Sbjct: 881  ENQRIEPEWYCPIIPTVLVNGAEGIGTAWSTKIPNYNPREIVDNMRRLIRGEEPKSLTPW 940

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQN 957
            ++ F GTIEK         Y  +G I  +++ T+ I ELPIR WTQ+Y+E  LE +++ +
Sbjct: 941  FKNFRGTIEKLDDSR----YICSGEIALLSDDTIEITELPIRTWTQNYKETVLEPMLEGS 996

Query: 958  DS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
            D     I+ F++Y  DTTV F V ++   +   + EGL K FKL + I+ S+M LFD  G
Sbjct: 997  DKQPPLIQDFKEYHTDTTVKFVVKMNAAKLREAEMEGLHKIFKLQSAINISSMVLFDPLG 1056

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             ++++   E+I +EFF IR + Y +RK  Q   L  +  +L N+ RFIL  + GEI++ N
Sbjct: 1057 CLRRFPNVEEICKEFFEIRKKKYIERKAFQEGMLRAQSERLSNQARFILEKIKGEILIEN 1116

Query: 1075 RKRTDLLLELRQKGFTPFP-------KNSKSIEAVVAGATDE---------TEESEENPE 1118
            +++  ++ +L +KGF P P       +  + +E       D+           ES  +P 
Sbjct: 1117 KRKVAIVEQLVKKGFDPDPVKRWKELQRKRELEMTGEIQVDDEEMEGEIEEESESSVSPV 1176

Query: 1119 VVNGVQSI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            + +  + + DYDYL+ MAI  L+ E+   LL D +   EE+  L   T   LW +DLD  
Sbjct: 1177 MKDLTKKLSDYDYLVGMAILKLSEEEKDKLLRDSELKLEELKSLESKTWSDLWKEDLDNF 1236

Query: 1178 DMQLDELDKSDA--RAEEERMKIKGNGNGDAGPKIVAKRAPKNARK 1221
               L EL+K +A  RA+ E M++K     DA  KI A  A K  RK
Sbjct: 1237 ---LVELEKQEAKERADIE-MQVK-----DAVKKI-AGAATKGGRK 1272


>gi|410083495|ref|XP_003959325.1| hypothetical protein KAFR_0J01230 [Kazachstania africana CBS 2517]
 gi|372465916|emb|CCF60190.1| hypothetical protein KAFR_0J01230 [Kazachstania africana CBS 2517]
          Length = 1425

 Score = 1130 bits (2924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/1195 (49%), Positives = 783/1195 (65%), Gaps = 80/1195 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K+  E YQK SQLEHIL RPDTYIGSIE   Q  WIY+E +  M+ + +  VPGL+KIFD
Sbjct: 6    KSASEKYQKISQLEHILKRPDTYIGSIEVQEQEQWIYDETTDCMMEKHVKIVPGLFKIFD 65

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP M  + V I  + + I V N G G+P+E+H++E +Y+PELIFGHLL
Sbjct: 66   EILVNAADNKVRDPTMKKIDVTISPDENQIEVRNDGKGIPIEVHEKEKIYIPELIFGHLL 125

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ KK TGGRNGYGAKL NIFSTEFI+ETAD    KKY Q + NNM     P I
Sbjct: 126  TSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETADPDTGKKYVQRWENNMNVCHPPKI 185

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +  K+G ++TKV+FKPDL++FNM  L+DD++ +M++RV D+ G + + + V LNG  + +
Sbjct: 186  TSYKKGPSYTKVTFKPDLSRFNMEKLDDDILGVMRRRVYDINGSV-RDINVYLNGKSLKI 244

Query: 265  KSFAEYVDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSF 305
            ++F  YV++Y KS+                   T  HERV++RWE+   +S+  FQQ+SF
Sbjct: 245  RNFKNYVELYLKSLEKKRLLDNGQDATVQNNIPTILHERVSDRWEVAFAVSDISFQQISF 304

Query: 306  VNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFD 365
            VN IAT  GGTHV+Y+ +Q+   V   +  K K  ++K   +KN++++FVN LI+NPAF 
Sbjct: 305  VNSIATTSGGTHVNYITDQIVRKVSDFL--KKKKKSIKPFQIKNNMFIFVNCLIENPAFT 362

Query: 366  SQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED 425
            SQTKE LT R   FGS+C++S E++ K+  K+ +   +   A+      LKK+DGT+   
Sbjct: 363  SQTKEQLTTRVKDFGSRCDISNEYINKI-MKTDLATKIFEIADENAHNALKKSDGTRKSR 421

Query: 426  VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
            +    KLEDAN AG R   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVR
Sbjct: 422  ITEYPKLEDANKAGTREGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVR 481

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
            EAS++Q+L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                
Sbjct: 482  EASADQILKNAEIQAIKKIMGLQHKKKYEDTKSLRYGHLMIMTD---------------- 525

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGK 603
                        QDHDGSHIKGL+INFI S +P LL IP FLVEFITPIVK   T    +
Sbjct: 526  ------------QDHDGSHIKGLIINFIESSFPGLLDIPGFLVEFITPIVKVTITKPRRQ 573

Query: 604  VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
             +SFY+MPDYE W+E    +  +W  KYYKGLGTST +E KEYF ++  H K F      
Sbjct: 574  TISFYNMPDYEKWREE-ESHKYTWKQKYYKGLGTSTGQEVKEYFSDLDRHLKKFHTLQGN 632

Query: 664  DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIP 723
            D + I+LAFSKKK + RK+WL Q+EPG  LD +   I  SDF+NKELILFS+AD  RSIP
Sbjct: 633  DKDLIDLAFSKKKADDRKEWLRQYEPGTVLDPRINEIPISDFINKELILFSLADNIRSIP 692

Query: 724  SMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFV 783
            +++DG KPGQRK+L+  F+RN   E KVAQ + YV E +AYHHGEQSLA TI+ +AQ+FV
Sbjct: 693  NVLDGFKPGQRKVLYGCFRRNLRSEIKVAQLAPYVGECTAYHHGEQSLAQTIISLAQNFV 752

Query: 784  GSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQI 843
            GSNNI LL PNG FGTR  GGKDAA+ARYIFT L+ +TR +F   DD L +YL +D + +
Sbjct: 753  GSNNIYLLMPNGAFGTRATGGKDAAAARYIFTELNKLTRKIFHPADDPLFNYLQDDEKTV 812

Query: 844  EPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFG 903
            EP WY+P+IP +LVNG EGIGTGWS+ IP +NP DIV N++ L+N E +E MHPW+RG+ 
Sbjct: 813  EPEWYLPVIPMLLVNGCEGIGTGWSTSIPPFNPEDIVRNIKHLMNNEALEEMHPWFRGWD 872

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFL---ESIIDQNDSF 960
            GTIE+T  +     Y + G IE+V   TL I ELP R WT   +E+L    S  D++  +
Sbjct: 873  GTIEQTDPQR----YRMYGRIEQVGSNTLEITELPARTWTSTIKEYLLLGLSGSDKSKPW 928

Query: 961  IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYD 1020
            I+   +    +T+ F + L++E M +TK+ G  ++FKL + +S  NM  FD  G IKKY+
Sbjct: 929  IKDMEE-QHGSTIKFIITLTDEEMAKTKKVGFYERFKLISPMSLMNMVAFDPYGKIKKYE 987

Query: 1021 TPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDL 1080
               +IL ++F++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E++V N+ R  +
Sbjct: 988  AVNEILTDYFYVRLEYYQKRKDYMSERLQWEVEKYSYQVKFIKMIIERELIVTNKPRKTI 1047

Query: 1081 LLELRQKGFTPFPKNSKSIEAV---VAGATDETEESE-------------ENPEVVNGVQ 1124
            + EL   GF    K  K        V+GA +E +ES              E  EV+NG +
Sbjct: 1048 IQELEAFGFPRINKEGKPYYGKTEDVSGALEEDDESSDAEEHDADSEHHTEGTEVINGPE 1107

Query: 1125 SI--DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
             I   Y+YLL M I +LT EK + LL  + +   E++ L K + + +W  DLDA 
Sbjct: 1108 EIYGSYEYLLGMRIWSLTKEKYERLLKQKQEKEVELEMLLKLSAKDIWNTDLDAF 1162


>gi|340960813|gb|EGS21994.1| topoisomerase-like protein [Chaetomium thermophilum var. thermophilum
            DSM 1495]
          Length = 1887

 Score = 1130 bits (2923), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 592/1257 (47%), Positives = 818/1257 (65%), Gaps = 92/1257 (7%)

Query: 1    MTVDKRLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWI 60
            M +D     T   +A     T   KT  E YQK +QLEHI+ RPDTYIGS+EK  Q +W+
Sbjct: 103  MQIDDAASGTADGDAAPAATTGKKKTATETYQKLTQLEHIIRRPDTYIGSVEKTDQKMWV 162

Query: 61   YEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSG 120
            + +  K M +RTI+YVPGLYKIFDEILVNAADN QRD  M  +KV ID+E   ISV N+G
Sbjct: 163  FNKNEKMMENRTITYVPGLYKIFDEILVNAADNSQRDSSMTYIKVTIDRESGEISVENNG 222

Query: 121  DGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETA 180
             G+PVEIH++E V++PELIFGHLLT SNYDDN KKT GGRNGYGAKLTNIFS  F IE  
Sbjct: 223  KGIPVEIHEKEQVWIPELIFGHLLTGSNYDDNEKKTVGGRNGYGAKLTNIFSKRFTIELQ 282

Query: 181  DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMK 239
            D    K+YKQ +T+NMG   +  I+  K  D + KVSF PD  +F M + ++DD+ AL+ 
Sbjct: 283  DSVNGKRYKQTWTDNMGNMEKAKITSNKSSD-FVKVSFLPDYKRFGMENGIDDDLEALLY 341

Query: 240  KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNER----------- 288
            +RV D+AG +   VKV LNG ++ + +F  Y ++Y +++ R  ER +E            
Sbjct: 342  RRVYDMAGTVN-GVKVYLNGEQLKI-NFKSYCELYARAIAR--ERGDEATDGDKPPAAKV 397

Query: 289  -----------WEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKN 337
                       W+I  T+S+G FQQVSFVN IAT  GGTHV+Y+A+Q+ + ++  +NK+ 
Sbjct: 398  EFDQVRDKGRLWQIGFTVSDGTFQQVSFVNNIATTSGGTHVNYIADQICDALVKELNKRK 457

Query: 338  KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKS 397
            K  ++K  + +NH+++F+N LIDNPAF SQTKE LT + S+FGSKC+LSE FLKK+  +S
Sbjct: 458  KGHSLKPSHFRNHIFIFINCLIDNPAFTSQTKEQLTTKVSAFGSKCQLSEPFLKKIR-QS 516

Query: 398  GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAK 457
              +  ++++A+ K  K L K+DG K   +    KL DANLAG +   +CTLILTEGDSA+
Sbjct: 517  EAIANIMAFADKKADKMLAKSDGNKRSRISN-EKLVDANLAGTKRGHECTLILTEGDSAR 575

Query: 458  ALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVK 517
             LA+AG +V+  DR GVFPLRGK+LNVR+AS +Q++ N EI NIKK LGLK   EY + K
Sbjct: 576  GLAVAGRAVLDPDRIGVFPLRGKMLNVRDASIDQIMKNKEIENIKKFLGLKHKQEYTDTK 635

Query: 518  SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFW 577
            SLRYGHLMIM DQ                            D DGSHIKGLLINF+   +
Sbjct: 636  SLRYGHLMIMADQ----------------------------DLDGSHIKGLLINFLEVQF 667

Query: 578  PSLLKIPSFLVEFITPIVKATNKNG-----KVLSFYSMPDYEAWKESLGGNASSWSIKYY 632
            PSLL+IP F  EFITP+VK    N       +  F+++P+YE WKE        W  KY 
Sbjct: 668  PSLLRIPGFFQEFITPVVKVWQGNNPKKPQNLKMFFNLPEYEQWKEEHKHELRKWKYKYL 727

Query: 633  KGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNH 692
            KGLG+S++++ + YF+++  H K F    D++ + +EL FSKKK +ARK+WL  F PG +
Sbjct: 728  KGLGSSSNEDAQVYFKDLDRHLKRFEVMTDEESKMLELVFSKKKADARKEWLANFVPGTY 787

Query: 693  LDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVA 752
            LD     +KY DF++KELILFSMAD  RSIPS+VDGLKPGQRK+++ +FKRN + + KVA
Sbjct: 788  LDSTTHTVKYKDFIDKELILFSMADNVRSIPSVVDGLKPGQRKVVYGAFKRNLVNDQKVA 847

Query: 753  QFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARY 812
            +F+GY+SE +AYHHGEQSL  TI+G+AQ++VGSNN+N+L+P+G FG+R  GG DAASARY
Sbjct: 848  EFAGYISEVAAYHHGEQSLQQTIVGLAQNYVGSNNVNILEPSGNFGSRLAGGSDAASARY 907

Query: 813  IFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIP 872
            I TRLSP  R +F K D+  L+Y  +DG  IEP  Y+PIIP VLVNG++GIGTGWS+ IP
Sbjct: 908  IHTRLSPFARKVFSKLDEPNLEYQFDDGNMIEPKVYVPIIPMVLVNGADGIGTGWSTGIP 967

Query: 873  NYNPRDIVANVRRLL----NGEMME----PMHPWYRGFGGTIEKTASKEAGVTYTVTGII 924
            NYNP+DIV N++R +    +G+ +E    PM PW+RG+ G +           +   GII
Sbjct: 968  NYNPKDIVENLKRRMGRDESGDGVEKPFLPMTPWWRGWKGQVLPDGPNR----WKFNGII 1023

Query: 925  --EEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLS 980
              +E N   + + ELPIR WT D++  LE I+  ++  SFI+ +++++D  TV F + + 
Sbjct: 1024 KQDETNPNEVHVTELPIRMWTDDFKARLEEILRAEKTPSFIKDYKEFNDHRTVHFVIEME 1083

Query: 981  EESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKR 1040
             + M    +EGL++KFKL+  IS +N+  FD++G IKKY+ PE++LEE++H RL  Y +R
Sbjct: 1084 PKHMEAALKEGLIEKFKLSKIISATNLVAFDTQGKIKKYENPEEMLEEYYHYRLAMYTER 1143

Query: 1041 KKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIE 1100
            KK  L   + E  KL+N+ RFIL ++ G++V+N +++  L+ ELR + + PFP N++   
Sbjct: 1144 KKHWLSVYDAEYRKLKNQYRFILEIIEGKLVINRKQKKILVKELRDRDYEPFPPNAEKKV 1203

Query: 1101 AVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLT---LEKVQGLLADRDKLNEE 1157
                   +  E S ++ +   GV + DYDYLLSM + + T   LEK++G++A +     E
Sbjct: 1204 KNTDEELNRDEASSDDEDAGGGVTARDYDYLLSMPVWSFTAERLEKLKGMIAAK---KAE 1260

Query: 1158 VDDLRKATPESLWVKDLDAL------DMQLDELDKSDARAEEERMKIK-GNGNGDAG 1207
             ++L   + + LWV+DLDA        ++ DE +  +   +  R  +K G GN   G
Sbjct: 1261 WNELNAKSEKDLWVEDLDAFMEEWEAQLKQDEENYHNVTKKGRRQSLKLGLGNAKGG 1317


>gi|118398165|ref|XP_001031412.1| DNA gyrase/topoisomerase IV, A subunit family protein [Tetrahymena
            thermophila]
 gi|89285740|gb|EAR83749.1| DNA gyrase/topoisomerase IV, A subunit family protein [Tetrahymena
            thermophila SB210]
          Length = 1416

 Score = 1129 bits (2921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/1187 (49%), Positives = 798/1187 (67%), Gaps = 72/1187 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K++EE YQKKSQ+EHILLRPD+Y+GSIE   ++LWI  +E   +  + I +VP  YKIFD
Sbjct: 6    KSVEERYQKKSQIEHILLRPDSYVGSIENEQKSLWILNKEGTALEEKEIDFVPAFYKIFD 65

Query: 85   EILVNAADNKQRD---PKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            EI+VNAADN QR+     MD +KV+IDQ++ +ISV N+G G+P++IH+E  +Y+PE+IFG
Sbjct: 66   EIIVNAADNFQRNQDGAPMDTIKVMIDQQNQMISVWNNGQGIPIQIHKEHNIYIPEMIFG 125

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            HLLTSSNYDD  +K  GGRNG+GAKLTNIFS +FI+E  D KR K YKQ +  NM +++E
Sbjct: 126  HLLTSSNYDDKEEKVVGGRNGFGAKLTNIFSKKFIVECNDDKRKKYYKQEWRKNMSERTE 185

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            P I++ K+G N+T V+F PDL+KF M ++ DD+  L++KRV D+AG     VKV LN  +
Sbjct: 186  PLITENKKGGNFTCVTFYPDLSKFKMQNISDDMANLLRKRVYDMAGIFNNKVKVYLNNEQ 245

Query: 262  VPVKSFAEYVDMYPKSVTRFHE-----RVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            + +KSF++YV+++   +   ++       ++RWEI VT S+GQF+QVSFVNGI T +GG 
Sbjct: 246  IKIKSFSQYVNLFIPDIEEQYKCYDPTMTSDRWEILVTFSDGQFKQVSFVNGICTSRGGK 305

Query: 317  HVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            HVD+V +++   +   + KKNK+ ++K H +K +L++F+N LI NP+FDSQTK+TLT + 
Sbjct: 306  HVDFVIDKIVERMQEQILKKNKDLDIKPHQIKQNLFIFMNCLIVNPSFDSQTKDTLTTKA 365

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN-DGTKTEDVRGISKLEDA 435
            S+FGSK ELSE+F+KK+   +GI+E ++S A  +Q+  L K   G K   + GI KL+DA
Sbjct: 366  SAFGSKPELSEKFIKKILG-TGIIEQIVSQAKARQNAKLAKTLKGGKKGRITGIPKLDDA 424

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG   SE CTLILTEGDSAKALAMAG+ VVGRD +GVFPL+GKLLNVREA+  Q++ N
Sbjct: 425  NDAGTARSENCTLILTEGDSAKALAMAGIEVVGRDNYGVFPLKGKLLNVREANKKQIIEN 484

Query: 496  SEIGNIKKILGLKQGVE-YNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
             EI NI KI+GL   V+ Y N K LRYG LMIM DQ                        
Sbjct: 485  QEIQNICKIIGLDPAVQNYENTKQLRYGSLMIMADQ------------------------ 520

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYE 614
                D DGSHIKGL+INFIH FWPSL K+  FL EFITPI+K T K  +V SF+++ D++
Sbjct: 521  ----DSDGSHIKGLVINFIHHFWPSLFKMKGFLKEFITPILKVT-KGDEVHSFFTIQDFK 575

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
             +    G     + +KYYKGLGTST KE KEYF N   H+ +F + D+ D EAIEL FS 
Sbjct: 576  NFAAQKGDRLKQYKVKYYKGLGTSTDKEAKEYFSNFYKHQINFQYLDENDMEAIELGFSG 635

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            KKI+ RK WL  ++P + +D   K ++Y DF+++ELI FS AD  RSIPS+ DGLKPGQR
Sbjct: 636  KKIKERKDWLANYDPNSFVDYNIKQLRYKDFIDRELIHFSNADNLRSIPSLCDGLKPGQR 695

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            KILF  FKRN   E KVAQ  GYV+EHSAYHHGEQSLASTI+GMAQ+FVGSNNINL+ P 
Sbjct: 696  KILFSCFKRNLKSEIKVAQLIGYVAEHSAYHHGEQSLASTIIGMAQNFVGSNNINLMMPI 755

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            GQFGTRNQGGK+ ASARYIFT LS ITR LFP+ DD +L YL +D Q +EP WYMPIIP 
Sbjct: 756  GQFGTRNQGGKEHASARYIFTSLSKITRILFPEHDDHVLKYLEDDNQVVEPEWYMPIIPM 815

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
             LVNGS GIGTGWS+ IPNYN ++IV  +R  L G+    +HPWY+GF G IE   + + 
Sbjct: 816  CLVNGSSGIGTGWSTDIPNYNHKEIVEQIRGKLEGKPFTELHPWYKGFQGQIE--INPKG 873

Query: 915  GVTYTVTGI--IEEVNETTLRIKELPIRRWTQDYREFLESIID--QNDSFIRGFRQYSDD 970
            G  Y V G   I+EV E T++I ELP+ +WT+DY+ +LE ++   + +  I   R+Y  +
Sbjct: 874  G--YIVKGQYEIDEVEE-TIKITELPVGKWTRDYKNYLEELLSPPKGEPEIEDIREYHTN 930

Query: 971  TTVDFEVFLSEESMMRTKQEG-LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEF 1029
              V FEV   +    R +Q G + KK KL+TT+ T+N+ +F+ K  +K+Y +  +I+EEF
Sbjct: 931  NRVHFEV---QAIPGRIQQWGDIEKKLKLSTTMQTTNIVMFNDKYKLKRYQSTVEIMEEF 987

Query: 1030 FHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGF 1089
            + +RL+ Y+KRK   +  ++ ++  L+NK++FI  VVNG + + N ++  +L +L++ G 
Sbjct: 988  YALRLKCYQKRKDYLVSKIQRDVDILQNKMKFITLVVNGTLEIRNARKKGVLNKLKELGL 1047

Query: 1090 TPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI-------------------DYDY 1130
            TP  K ++     +    ++ +ES+      N  + +                   +Y+Y
Sbjct: 1048 TPMSKITRINSTKIQAFEEKKKESQAEKNEDNEDEEVQQDEEEEEEQVQEGEIPLSEYNY 1107

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            LLSM I +LT EKV  L    ++   E+  L+K   + +W +DLD  
Sbjct: 1108 LLSMPIFSLTEEKVLQLKKQVEEKESELLILQKKEIKDMWTEDLDKF 1154


>gi|150951045|ref|XP_001387295.2| DNA topoisomerase II [Scheffersomyces stipitis CBS 6054]
 gi|149388275|gb|EAZ63272.2| DNA topoisomerase II [Scheffersomyces stipitis CBS 6054]
          Length = 1439

 Score = 1129 bits (2921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 604/1312 (46%), Positives = 837/1312 (63%), Gaps = 114/1312 (8%)

Query: 8    PLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT 67
            PLT+++++N    T       E YQK SQLEHIL RPDTYIGS+E+    +W Y+E S  
Sbjct: 48   PLTSTDSSN---GTKSKSNASETYQKLSQLEHILKRPDTYIGSVERTKMEMWSYDEASDE 104

Query: 68   MIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEI 127
            M+++ +S VPGLYKIFDEILVNAADNK RDP M  ++V ID E++ I V N G G+P+EI
Sbjct: 105  MVYKEVSIVPGLYKIFDEILVNAADNKIRDPTMKNIRVKIDPENNTIQVMNDGRGIPIEI 164

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
            H++E +Y+PELIFG+LLTSSNYDD+ KK TGGRNG+GAKL NIFSTEF +ETAD      
Sbjct: 165  HEKEKIYIPELIFGNLLTSSNYDDDEKKVTGGRNGFGAKLCNIFSTEFQLETADLNTELL 224

Query: 188  YKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
            YKQ +T NM + ++P I+K K    +TKVSF+PDL+KF M  L++++++++++RV DL G
Sbjct: 225  YKQTWTGNMSQVTKPKITKLKTKKEYTKVSFRPDLSKFGMESLDEEILSVLRRRVYDLCG 284

Query: 248  CLGKSVKVELNGHRVPVKSFAEYVDMY------------------PKSVTRFHERVNERW 289
             + K   V LN  ++ V++F  YV+MY                   K  T  HE  N+RW
Sbjct: 285  TV-KDCNVYLNDKKLNVRNFKSYVEMYVNAIKKRSPDTALEENNGTKYTTVVHEVFNDRW 343

Query: 290  EICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VKAHN 346
            E+   +S+G F QVSFVN IAT  GGTHV YV++Q+ N ++  ++KK K      +K   
Sbjct: 344  ELAFAVSDGSFNQVSFVNSIATTSGGTHVKYVSDQIINKLVETLSKKEKGKKKLMIKPQE 403

Query: 347  VKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE----LSEEFLKKVTAKSGIVET 402
            V+N++++F+N LI+NPAF SQTKE LT R S FG K      +S+ F+ K+  K+ IV+ 
Sbjct: 404  VRNNMFLFLNCLIENPAFTSQTKEQLTTRVSQFGGKPSEKLVISDNFISKI-LKTSIVDK 462

Query: 403  LLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMA 462
            +   AN  + K L+K DG+K   ++G  KL DAN AG R+  +CTLILTEGDSA +LA++
Sbjct: 463  IRDIANANEDKALQKADGSKKSRIKGQVKLVDANKAGTRDGNKCTLILTEGDSALSLAVS 522

Query: 463  GLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLR 520
            GL+VVGRD +G FPLRGKLLNVREAS++Q+  N+EI  +K+I+GL+    Y   N K+LR
Sbjct: 523  GLAVVGRDYYGCFPLRGKLLNVREASADQIAKNTEINALKQIIGLQHKKVYTPENAKTLR 582

Query: 521  YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
            YGH+MIMTD                            QD DGSHIKGL+INF+ + +P L
Sbjct: 583  YGHIMIMTD----------------------------QDQDGSHIKGLIINFLETSFPGL 614

Query: 581  LKIPSFLVEFITPIVKATNK---NGK-VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
            L IP FL+EFITPI+K T K    GK V+ FY+MP++E W+E  GGN S WS KYYKGLG
Sbjct: 615  LNIPGFLLEFITPIIKVTIKKRGGGKEVIPFYNMPEFETWREREGGN-SRWSHKYYKGLG 673

Query: 637  TSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQK 696
            TST  E ++YF  +  H K F    + D + I+LAFSKKK + RK+WL  F+PG HLD  
Sbjct: 674  TSTPLEARQYFSALDKHLKRFHALQEDDKQYIDLAFSKKKADERKEWLQGFQPGTHLDPN 733

Query: 697  EKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSG 756
               I  SDF+N+ELILFSMAD  RSIPS++DG KPGQRK+L+  FKRN   E KVAQ SG
Sbjct: 734  LTEIPISDFINQELILFSMADNVRSIPSVLDGFKPGQRKVLYGCFKRNLKSEIKVAQLSG 793

Query: 757  YVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTR 816
            YVSE + YHHGEQSL  TI+G+AQ+FVGSNNINLL+PNG FGTR  GGKD ++ARYIFT 
Sbjct: 794  YVSEKTGYHHGEQSLVQTIIGLAQNFVGSNNINLLKPNGAFGTRAAGGKDFSAARYIFTE 853

Query: 817  LSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNP 876
            +S ITR +F   DD +  Y+ +D Q +EP WY+P+IP +LVNGSEGIGTGWS+ IP+YNP
Sbjct: 854  ISKITRAIFNPLDDPIYTYVQDDEQSVEPEWYLPVIPMLLVNGSEGIGTGWSTNIPSYNP 913

Query: 877  RDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKE 936
             D+V N+RRL+NGE ME M PW++G+ GTIE     +    Y V G I++++ETT+ I E
Sbjct: 914  LDLVDNIRRLMNGEPMEEMKPWFKGWEGTIEPNGPDK----YKVVGKIDQIDETTVEITE 969

Query: 937  LPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLK 994
            +P++ WT + +EFL + +  ++  ++I+   +      + F V +S + M +  + GLL+
Sbjct: 970  IPVKTWTNNVKEFLLAGLGNEKTPAWIKDMEE-QHGLNIRFVVKMSPDEMAKALKVGLLE 1028

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
            KFKL ++IS SNM  FD  G IK+Y + ++IL +++++RLE+Y+KRK   ++ L+ +L K
Sbjct: 1029 KFKLISSISMSNMVAFDPLGRIKRYSSAQEILRDYYYVRLEYYQKRKDFMMDELQNQLTK 1088

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSI--------------- 1099
               + RF+  +++ ++ V+N+KR DL+  L    F  F KN+K +               
Sbjct: 1089 FSEQARFVKMIIDKQLSVSNKKRVDLVKTLEDLKFVKFNKNNKPVSETGNDSLFLAAEED 1148

Query: 1100 ------------EAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGL 1147
                        + ++ G     E++E  PE +       YDYLL M+I +LT E+ + L
Sbjct: 1149 IEEAEAEVGDVSQLLIGGIQVGNEDNEHKPETIYS----HYDYLLGMSIWSLTRERYEKL 1204

Query: 1148 LADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAG 1207
            L  +D+   E++DL K + + LW  DLD    + ++   +D +   E +  KG       
Sbjct: 1205 LQQKDEKEHELNDLLKKSAKDLWNYDLDVFVEEWEKFLDADLQERMEMIPTKGT------ 1258

Query: 1208 PKIVAKRAPKNA----RKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKK 1255
             K  AKR  K A     K +  S   +   A  +  ++T V + K +  +KK
Sbjct: 1259 -KKTAKRTRKPAVKPIVKKEDDSEPPKKKAATNKSKSITPVPEIKAKTEVKK 1309


>gi|28277299|gb|AAH44276.1| LOC398512 protein [Xenopus laevis]
          Length = 1132

 Score = 1129 bits (2920), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 604/1170 (51%), Positives = 788/1170 (67%), Gaps = 78/1170 (6%)

Query: 8    PLTTSNNANVVGPT--APNK--TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEE 63
            PL    N   VG    + NK  ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++E
Sbjct: 5    PLQPLENKTAVGKVKKSDNKRLSVERIYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDE 64

Query: 64   ESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGV 123
            + + +  R I++VPGLYKIFDEILVNAADNKQRDP M  +K+ ID +++ ISV N+G G+
Sbjct: 65   D-EGLNCRDITFVPGLYKIFDEILVNAADNKQRDPTMSCIKITIDPDNNTISVWNNGKGI 123

Query: 124  PVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGK 183
            PV  H+ E VYVP LIFG LLTSSNYDD+ KK TGGRNGYGAKL NIFS +F +ETA  +
Sbjct: 124  PVVEHKVEKVYVPALIFGQLLTSSNYDDDQKKVTGGRNGYGAKLCNIFSNKFTVETACRE 183

Query: 184  RLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVV 243
              K +KQ +TNNM    +P I K  EG+++T ++F+PDL+KF M  L+ D+VALM +R  
Sbjct: 184  YKKIFKQTWTNNMSNAPDPKI-KPFEGEDFTCITFQPDLSKFKMQILDKDIVALMSRRAY 242

Query: 244  DLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTL 295
            D+AG   K VKV LNG R+PV  F  YV+MY K             HE+VN+RWE+C+T+
Sbjct: 243  DVAGS-SKGVKVFLNGKRLPVSGFRTYVEMYLKDKLDETGNPFKVMHEQVNDRWEVCLTM 301

Query: 296  SEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVF 354
            SE  FQQ+SFVN IAT KGG HVDYVA+Q+   ++ VV KKNK   +VK   VKNH+WVF
Sbjct: 302  SEKGFQQISFVNSIATTKGGRHVDYVADQIVTKLIDVVKKKNKGGISVKPFQVKNHMWVF 361

Query: 355  VNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKD 414
            VNALI+NP FDSQTKE +TL+  SFGSKC LSE+F+K  T+  GIVE++L+W  FK    
Sbjct: 362  VNALIENPTFDSQTKENMTLQSKSFGSKCTLSEKFIKGATS-CGIVESILNWVKFKAQTQ 420

Query: 415  L-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFG 473
            L KK    K   ++GI KL+DAN AG RNS +CTLILTEGDSAK LA++GL VVGRDR+G
Sbjct: 421  LNKKCSAVKHTKIKGIPKLDDANDAGSRNSLECTLILTEGDSAKTLAVSGLGVVGRDRYG 480

Query: 474  VFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQ 530
            VFPLRGKLLNVREAS  Q++ N+EI NI KI+GL+    Y++   +++LRYG +MIMTDQ
Sbjct: 481  VFPLRGKLLNVREASHKQIMENAEINNIIKIVGLQYKKNYDDNESLRTLRYGKIMIMTDQ 540

Query: 531  VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
                                        D DGSHIKGLLINFIH  WPSLLK   FL EF
Sbjct: 541  ----------------------------DQDGSHIKGLLINFIHHNWPSLLK-HCFLEEF 571

Query: 591  ITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNI 650
            ITPI+K T KN + LSFYS+P++E WK +   +  +W IKYYKGLGTSTSKE KEYF ++
Sbjct: 572  ITPIIKVT-KNKQELSFYSIPEFEEWKNNTESH-KTWKIKYYKGLGTSTSKEAKEYFADM 629

Query: 651  TLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHLDQKE-K 698
              H+  F +    D  AI +AFS+KK++ RK+WL  F            P  +L  K  K
Sbjct: 630  ERHRIPFKYAGPIDDAAITMAFSRKKVDDRKEWLTNFMQDRRERRLHGLPEEYLYGKSTK 689

Query: 699  YIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYV 758
            Y+ ++DF+NKELILFS +D +RSIPS+VDGLKPGQRK+LF  FKRN  +E KVAQ +G V
Sbjct: 690  YLTFNDFINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSV 749

Query: 759  SEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLS 818
            +E SAYHHGE SL  TI+ +AQ+FVGSNN+NLLQP GQFGTR  GGKDAAS RYIFT LS
Sbjct: 750  AEMSAYHHGEISLMMTIINLAQNFVGSNNVNLLQPIGQFGTRLHGGKDAASPRYIFTMLS 809

Query: 819  PITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRD 878
            P+ R LFP  DD +L ++ +D Q++EP WY+PIIP VLVNG+EGIGTGWS  +PNY+ R+
Sbjct: 810  PLARLLFPALDDNVLKFMYDDNQKVEPEWYIPIIPMVLVNGAEGIGTGWSCKLPNYDTRE 869

Query: 879  IVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELP 938
            IV N+RR+L+G+  + M P Y+ F G I++    +    + + G +  ++ TT+ I ELP
Sbjct: 870  IVNNIRRMLDGDEPQQMLPSYKNFKGVIQELGPNQ----FILNGEVSVLDSTTIEISELP 925

Query: 939  IRRWTQDYRE-FLESIIDQNDS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLK 994
             R WTQ+Y+E  LE +++  +     I  +++Y  DTTV F V ++E+ +   +  GL K
Sbjct: 926  ARTWTQNYKEQVLEPMLNGTEKTPPLITDYKEYHTDTTVRFLVKMTEQKLAEAEAAGLHK 985

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             FKL  +++ ++M LFD  G ++KY+T   IL EFF +R+++Y  RK   +  L  E  K
Sbjct: 986  VFKLQASLTCNSMVLFDHVGCLRKYETVLDILREFFDLRVKYYSLRKDWLVGMLTAEASK 1045

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEES 1113
            L N+ RFIL  + G+IV+ N+ + +L+  L Q+G+   P K  K  +          EE 
Sbjct: 1046 LSNQARFILEKIEGKIVIENKPKKELIQMLVQRGYDSDPVKTWKQTQEKEEAGELIEEEE 1105

Query: 1114 EENPEVVNGVQSIDYDYLLSMAIGTLTLEK 1143
             E           D++YLLSM +  LT +K
Sbjct: 1106 AEANAT-----GPDFNYLLSMPLWYLTKKK 1130


>gi|396467124|ref|XP_003837847.1| similar to DNA topoisomerase II [Leptosphaeria maculans JN3]
 gi|312214411|emb|CBX94403.1| similar to DNA topoisomerase II [Leptosphaeria maculans JN3]
          Length = 1716

 Score = 1129 bits (2919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 589/1173 (50%), Positives = 787/1173 (67%), Gaps = 64/1173 (5%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQ  + LEHI+ RPDTYIGS+E+ T  +W+Y   +++M  R ++YVPGLYKIFDEILVNA
Sbjct: 146  YQMLTHLEHIMKRPDTYIGSVERQTDKMWVYNSSTESMEFRDVTYVPGLYKIFDEILVNA 205

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ D  M  ++V +D+E   IS+ N G G+P+EIH+E G+YVPE+IFGHLLTSSNYD
Sbjct: 206  ADNKQNDKNMSEIRVTLDRETGEISIKNDGKGIPIEIHKEHGIYVPEMIFGHLLTSSNYD 265

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            DN +K TGGRNGYGAKL N+FSTEF +ET D K+ KKYKQ +T+NM K  +  I   K  
Sbjct: 266  DNQQKVTGGRNGYGAKLCNVFSTEFTVETVDSKQKKKYKQTWTDNMSKMGKAKIVDFKSS 325

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++TKVS+K D  +F MT ++DD  A++K+R  D+AG L + VKV LNG RV V SFA+Y
Sbjct: 326  DDYTKVSWKADYDRFGMTGIDDDFEAMVKRRTYDIAGTL-RGVKVYLNGDRVKVTSFAKY 384

Query: 271  VDMYPKSVTRFHERV-------------NERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++MY KS+ R   R              ++RW+I   +S+G F QVSFVN IAT  GGTH
Sbjct: 385  MEMYTKSIAREQGRSEDDKEANVIITDKHDRWDIGFAVSDGAFNQVSFVNSIATTSGGTH 444

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            V+Y+A Q+ + ++A+VNKKNK A  +K   +KNH+++FVN  I NPAF SQTKE LT + 
Sbjct: 445  VNYIAEQIVDRLLAIVNKKNKAAVKLKPAQIKNHIFLFVNCSIVNPAFTSQTKEQLTTKS 504

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            S FGSK  LS++FLK +  K+ +++ ++ +A  K  + +KK DG K   +   +KL DAN
Sbjct: 505  SQFGSKPVLSDKFLKAI-EKTDVIQNIMHFAQQKADQMMKKTDGNKRNRISN-AKLTDAN 562

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG ++   CTLILTEG+SA  LA+AG +VV +D FGVFPLRGKLLNVR+A+ +Q++ N+
Sbjct: 563  KAGTKDGHLCTLILTEGESASVLALAGRAVVNQDLFGVFPLRGKLLNVRDATVDQIMKNA 622

Query: 497  EIGNIKKILGLKQGVEY--NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
            EI NIKK +GL+   EY  +++KSLRYGHLMIMTDQ                        
Sbjct: 623  EIQNIKKFMGLQHKKEYTVSDMKSLRYGHLMIMTDQ------------------------ 658

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---ATNKNGKVL-SFYSM 610
                DHDGSHIKGLLINF+   +PSLLKIP FL+EFITPIVK      KN + L SF+SM
Sbjct: 659  ----DHDGSHIKGLLINFLQCQFPSLLKIPGFLLEFITPIVKVWKGDPKNPRSLKSFFSM 714

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+YE WKE    +   W  KY+KGLGTS   + + YF+++  H K F    +++ + IEL
Sbjct: 715  PEYEEWKEQ-HKHEKGWEHKYFKGLGTSDIPDAQIYFKDLDTHMKSFQVMREEEEKLIEL 773

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AFSKKK +ARK+WL  F PG HLD   + I Y DFVNKELILFSMAD  RSIPS++DGLK
Sbjct: 774  AFSKKKADARKEWLRDFVPGQHLDLTTQEISYDDFVNKELILFSMADNLRSIPSVIDGLK 833

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+++  F+RN  K+ KV   +G VS  + Y HGE S+  TI+G+AQ+FVG+NNIN 
Sbjct: 834  PGQRKVMYTCFRRNIKKDVKVIDLAGSVSGTTDYAHGESSMQGTIVGLAQNFVGTNNINY 893

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+P+G FG+R +GG DAASARYI+TRLSP  R +F   DD LL Y   DG+ IEP  Y+P
Sbjct: 894  LEPSGNFGSRLKGGADAASARYIYTRLSPFARRIFHAHDDALLKYGESDGKPIEPEMYIP 953

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVR-RLLNG---EMMEPMHPWYRGFGGTI 906
            ++PT+L+NGS GIGTGWSS IPN+NP +I+ N+R R+  G   E M PM PWY+GF G  
Sbjct: 954  VLPTILINGSSGIGTGWSSEIPNFNPMEIIDNIRIRMKEGATKEDMRPMVPWYKGFTGRT 1013

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGF 964
            E+         Y  TG I +  +  + + ELP+R WTQD++E LE II  D+  SFI+ +
Sbjct: 1014 EELGENR----YQFTGTIRQTGDNEVEVTELPVRYWTQDFKEKLEEIIKADKTPSFIKDY 1069

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
              Y+    V F + + ++ M     +GL + FKL    ST+N+  FD+ G I KY T   
Sbjct: 1070 IDYNTPDRVHFIIKMEDKYMAAALAKGLEEMFKLFKPQSTTNLVAFDAHGRIHKYATVLD 1129

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            I+EEF+H+RL +YEKRK+ QLE +  EL K+ N+ +FI  +++G++VV+ +K+  L+ EL
Sbjct: 1130 IIEEFYHVRLRYYEKRKQHQLEVMHKELSKMTNQAKFIQMIIDGKLVVSKKKKLALVQEL 1189

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            ++ GFTP PK   + +A      D  E+ E+  E   G  + DYDYLL MAI +LT E+V
Sbjct: 1190 KKLGFTPIPKVDDAKKA--GEIDDVQEDEEDTDETEAGASASDYDYLLGMAIWSLTQERV 1247

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            + LL    +  EE+D L K +P+ +W  DLDA 
Sbjct: 1248 EKLLKQIGEKEEEIDTLIKLSPKDIWNVDLDAF 1280


>gi|255718235|ref|XP_002555398.1| KLTH0G08338p [Lachancea thermotolerans]
 gi|238936782|emb|CAR24961.1| KLTH0G08338p [Lachancea thermotolerans CBS 6340]
          Length = 1436

 Score = 1128 bits (2918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 582/1185 (49%), Positives = 788/1185 (66%), Gaps = 68/1185 (5%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K+  E YQK SQLEHIL RPDTY+GS+E   Q  WI++E +  M+ + +  VPGL+KIFD
Sbjct: 5    KSASERYQKISQLEHILKRPDTYVGSVEIQEQTQWIHDEATDCMVEKNVKIVPGLFKIFD 64

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP M  ++V I++E + I V N G G+P+EIH++E +Y+PE+IFGHLL
Sbjct: 65   EILVNAADNKVRDPSMKKIEVNINKEENFIEVKNDGKGIPIEIHEKEQIYIPEMIFGHLL 124

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ KK TGGRNGYGAKL NIFS+EFI+ETAD  + +KY Q +  NM    +P I
Sbjct: 125  TSSNYDDDEKKVTGGRNGYGAKLCNIFSSEFILETADPIKGEKYLQKWEANMSICHKPKI 184

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +  K+G ++TKVSFKPDL +F M HL+DD+V +M++RV D+ G + + + V LNG  + +
Sbjct: 185  TSYKKGPSYTKVSFKPDLQRFGMEHLDDDIVGIMRRRVFDINGSV-RDISVYLNGKSLRI 243

Query: 265  KSFAEYVDMYPKSV----------------TRFHERVNERWEICVTLSEGQFQQVSFVNG 308
            ++F  YV++Y KS+                T  +ER+N+RWEI   +S+  FQQ+SFVN 
Sbjct: 244  RNFKNYVELYLKSLEKKKSEEQGADVGKAPTILYERLNDRWEIAFAVSDVAFQQISFVNS 303

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQT 368
            IAT  GGTHV+YV++Q+   +   + KK K   +KA  +KNH+++FVN  I+NPAF SQT
Sbjct: 304  IATTSGGTHVNYVSDQIVKKITEHLKKKKKGKTIKAFQIKNHIFIFVNCQIENPAFTSQT 363

Query: 369  KETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRG 428
            KE LT R   FGSKC++ +EF+ K+  K+ + E +   A+  + K L+K+DG++   +  
Sbjct: 364  KEQLTTRVRDFGSKCDIKDEFINKIM-KTELAERVFELADQNEEKALQKSDGSRKNRITK 422

Query: 429  ISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREAS 488
             + LEDAN AG +   +CTL+LTEG SA++LA+AGL+VVGRD +G +PLRGK+LNVREAS
Sbjct: 423  YATLEDANCAGTKQGYKCTLVLTEGLSAQSLAVAGLAVVGRDYYGCYPLRGKMLNVREAS 482

Query: 489  SNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAW 548
            + Q+  N+EI  IKKI+GL+   +Y + KSLRYGH+MIMTDQ                  
Sbjct: 483  AEQINKNAEIQAIKKIVGLQHRKKYEDTKSLRYGHIMIMTDQ------------------ 524

Query: 549  ITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK--VLS 606
                      DHDGSHIKGL+INF+ S +P LL IP FL+EFITPIVK T    K  V+S
Sbjct: 525  ----------DHDGSHIKGLIINFLESSFPGLLDIPGFLIEFITPIVKVTITRPKRDVIS 574

Query: 607  FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
            FY+MPDYE W+E    +  SW  KYYKGLGTS+ +E +EYF ++  H K F   + +D +
Sbjct: 575  FYNMPDYEEWREK-ESHKYSWKQKYYKGLGTSSLQEAREYFSDLDTHLKKFHALEGEDSQ 633

Query: 667  AIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
             I+LAFSKKK + RK+WL Q+EPGN LD     I   DF+NKELILFS+AD  RSIPS++
Sbjct: 634  LIDLAFSKKKADDRKEWLRQYEPGNTLDPTLSEIPICDFINKELILFSLADNVRSIPSVL 693

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DG KPGQRK+L+  FKR    E KVAQ  GYVSEH++YHHGEQSLA TI+GMAQD+VGSN
Sbjct: 694  DGFKPGQRKVLYSCFKRKLKSEIKVAQLIGYVSEHTSYHHGEQSLAQTIVGMAQDYVGSN 753

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            NI LL+PNG FGTR  GGKD+A+ RYIFT L+ IT  +F   D+ LL YL ED Q IEP 
Sbjct: 754  NIYLLKPNGAFGTRAAGGKDSAAPRYIFTELNNITPNIFNPLDNPLLTYLQEDDQTIEPQ 813

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI 906
            WY+P+IP +LVNG+EGIGTGWS+ IP +NP +IV N+++L+NGE M+ M P+YRG+ G +
Sbjct: 814  WYLPVIPMILVNGAEGIGTGWSTNIPCFNPLEIVQNIKKLMNGEPMDDMAPFYRGWEGRL 873

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRG 963
            +K      G  Y + G IE+V   TL I ELP + W    +E L   +  N+    +I+ 
Sbjct: 874  QKI----DGQRYRMYGRIEQVGPRTLEITELPAKTWISTIKEHLLLGLAGNEKTKPWIKD 929

Query: 964  FRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPE 1023
              Q +   T+ F V L++E M  T++ G  ++FKL +TIS +NM  FD  G IKKY+   
Sbjct: 930  M-QENHGATIKFTVELTDEEMQNTRRIGFYERFKLVSTISLANMVAFDPNGRIKKYEDVR 988

Query: 1024 QILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLE 1083
             IL +F+++RLE+++KRK    E L+ ++ KL  + RFI  +V  ++ V N+ R+ L  E
Sbjct: 989  DILSDFYYVRLEYFQKRKDHMSERLQWQVEKLSQQTRFIKLIVEKKLTVTNKPRSALFRE 1048

Query: 1084 LRQKGFT-------PFPKNSKSIEAVV--AGATDETEESEENPEVVNGVQSI--DYDYLL 1132
            L + GF        P+    K  E  V  A  +D+ E+ EE    VNG Q     ++YLL
Sbjct: 1049 LEELGFPKINSEGRPYYGAVKGEEQSVLDAAYSDDNEDPEEESNEVNGPQDKYGTFEYLL 1108

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
             M I +LT EK + LL  + +   E+D+L + + + LW +DLDA 
Sbjct: 1109 GMKIWSLTKEKYEKLLNQKQEKEVELDNLLRLSAKDLWCQDLDAF 1153


>gi|38453803|dbj|BAD02202.1| DNA topoisomerase II [Arthroderma gypseum]
          Length = 1086

 Score = 1128 bits (2918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/1127 (51%), Positives = 777/1127 (68%), Gaps = 61/1127 (5%)

Query: 33   KKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAAD 92
            K +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNAAD
Sbjct: 1    KITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNAAD 60

Query: 93   NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN 152
            NKQ DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D 
Sbjct: 61   NKQNDPSMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEHIYIPELIFGHLLTSSNYNDM 120

Query: 153  VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             +K TGGRNGYGAKL NIFS EF +ETAD    KK+K  +T NM    +  I++ K GD+
Sbjct: 121  QEKVTGGRNGYGAKLCNIFSNEFTVETADSSNKKKFKLTWTKNMSTMGKAKITESK-GDD 179

Query: 213  WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            +TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+PVKSF +Y++
Sbjct: 180  YTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTTVK--LNGTRIPVKSFKKYME 237

Query: 273  MYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
            MY K++                 E  + RWEI  T+S+G FQQVSFVN IAT  GGTHV+
Sbjct: 238  MYTKAIKTERGEDPTSDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTHVN 297

Query: 320  YVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVN+ I NPAF SQTKE LT R S 
Sbjct: 298  YISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNSQIVNPAFTSQTKEQLTTRSSQ 357

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLA 438
            FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN A
Sbjct: 358  FGSKCIVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDANKA 415

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            G +    CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+EI
Sbjct: 416  GTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNAEI 475

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
             NIK  +GL+   EY + + LRYGHLMIMTDQ                            
Sbjct: 476  QNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ---------------------------- 507

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPDYE 614
            DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++P+YE
Sbjct: 508  DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHSKSFFTLPEYE 567

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
             WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAFSK
Sbjct: 568  EWKEA-HAHDKKWQKKYYKGLGTSSTEDAQVYFQDLDRHLKQFHTLQDKEAELIELAFSK 626

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            KK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPGQR
Sbjct: 627  KKADERKEWLRQFKPGTYLDHSMDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQR 686

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+P+
Sbjct: 687  KVLYTMFKRNVKKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPS 746

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++P 
Sbjct: 747  GNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNVDDGKVIEPETYVPVVPL 806

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            +L+NG++GIGTGWS+ IPNYNP D+V N++RL+ G+ + PM PW+RGF G  E T S   
Sbjct: 807  ILINGADGIGTGWSTSIPNYNPEDVVDNLKRLMAGDELVPMKPWFRGFKG--EVTGS--- 861

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTT 972
            G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  T 
Sbjct: 862  GDRYKFSGIIKQTGDNEVEISELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYNTHTN 921

Query: 973  VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
            V F + + E+ M +  +EGL +KFKL   I+TSNM  FD++G I +Y+TPE IL  F+ +
Sbjct: 922  VHFIIQMEEKHMKKAVEEGLEEKFKLVKQIATSNMVAFDAEGRITRYETPEDILRAFYAV 981

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++KGF PF
Sbjct: 982  RIKLYEKRKQHLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKALLIQELQEKGFKPF 1041

Query: 1093 PKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            PK   + E     A D  +E +E       + S  YDYLLSM + +L
Sbjct: 1042 PKVVDTPEP--GEAGDVEDEEDEEETATAALSSDAYDYLLSMPLWSL 1086


>gi|351698720|gb|EHB01639.1| DNA topoisomerase 2-alpha, partial [Heterocephalus glaber]
          Length = 1491

 Score = 1128 bits (2917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/1201 (49%), Positives = 789/1201 (65%), Gaps = 107/1201 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 28   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDI-GINYREVTFVPGLYKIFDE 86

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 87   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 146

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KKT                                   + +NMG+  E  + 
Sbjct: 147  SSNYDDDEKKT-----------------------------------WRDNMGRAGEMEL- 170

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 171  KPFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 229

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 230  GFRSYVDMYLKDKLDETGNPLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 289

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 290  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 349

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 350  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 408

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG RNS +CTLILTEGDSAK LA++GL VVGRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 409  NDAGSRNSTECTLILTEGDSAKTLAVSGLGVVGRDRYGVFPLRGKILNVREASHKQIMEN 468

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 469  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 506

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 507  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 558

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 559  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 617

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 618  SKKQIDDRKDWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 677

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 678  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 737

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L +L +D 
Sbjct: 738  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPKDDHTLKFLYDDN 797

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VLVNG+EGIGTGWS  IPN++ R++V N+RRL++GE   PM P Y+
Sbjct: 798  QRVEPEWYIPIIPMVLVNGAEGIGTGWSCKIPNFDVREVVNNIRRLMDGEEPLPMLPSYK 857

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y + G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 858  NFRGTIEELAPNQ----YVINGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 913

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 914  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERAGLHKVFKLQTSLTCNSMVLFDHVGCL 973

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 974  KKYDTALDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1033

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID----YDYLL 1132
            + +L+  L Q+G+   P  +           ++ EES+   E   G  + D    + YLL
Sbjct: 1034 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEDNEESDSEKETAKGDSAADTGPTFAYLL 1093

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1192
             M +  LT EK   L   R +  +E+  L+K +P  LW +DL A   +L+ ++  + + E
Sbjct: 1094 DMPLWYLTKEKKDELCKQRSEKEQELHTLKKKSPSDLWKEDLAAFVEELEAVEAKEKQDE 1153

Query: 1193 E 1193
            +
Sbjct: 1154 Q 1154


>gi|115392233|gb|ABI96917.1| topoisomerase [Trypanosoma congolense]
 gi|342186236|emb|CCC95722.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 1439

 Score = 1128 bits (2917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 582/1206 (48%), Positives = 799/1206 (66%), Gaps = 85/1206 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            +T+EE+YQKK+Q EHIL RPD YIG+IE  T+ +W+Y+E    M  +  ++ PGLYKIFD
Sbjct: 4    RTVEEIYQKKTQHEHILARPDMYIGTIEPVTEDMWVYDEADCVMKLQRCTWTPGLYKIFD 63

Query: 85   EILVNAADNKQRDPK-MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            EILVNAADNK RDP    A+KV ID E  +I V+N+G+G+PV+ H+E  ++VPE+IFGHL
Sbjct: 64   EILVNAADNKVRDPHGQTAIKVWIDTERGVIRVYNNGEGIPVQRHREHDLWVPEMIFGHL 123

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LTSSNYDD   K TGGRNG+GAKLTN+FST F +ET   +  KK+   + NNM +  EP 
Sbjct: 124  LTSSNYDDTEAKVTGGRNGFGAKLTNVFSTCFELETVHSRSRKKFFMRWRNNMLESEEPV 183

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            I+ C +G ++T V+F PD AKF +  L +D+  +MK+RV D+AGC  KS+   LNG ++P
Sbjct: 184  ITSC-DGPDYTMVTFYPDFAKFKLQGLSEDMALIMKRRVYDIAGCTEKSLSCYLNGEKIP 242

Query: 264  VKSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
             +SFAEYVD+YP    +     + RVN+RWE+CV +S   FQQVSFVN IAT +GGTHV 
Sbjct: 243  CRSFAEYVDLYPTMGEERRPGSYSRVNDRWEVCVRVSNIGFQQVSFVNSIATTRGGTHVK 302

Query: 320  YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
            YV  Q+   V     +K+K   VK H ++ H++VFVN LI+NP+FDSQTKETL   ++ F
Sbjct: 303  YVVEQIIAKVTEQAMRKSKT-EVKPHMIRPHMFVFVNCLIENPSFDSQTKETLNTPKTRF 361

Query: 380  GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK-KNDGTKTEDVRGISKLEDANLA 438
            GS C+L    +  V  KS IVE  +  AN K S+++  K   +  + V GI KL+DAN A
Sbjct: 362  GSVCDLPASLIDCVL-KSSIVERAVEMANSKLSREMAMKLRNSNRKQVLGIPKLDDANEA 420

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            GG+NS +CTLILTEGDSAKAL  AGL+V  RD FGVFPLRGK LNVR+AS  +V++ +E 
Sbjct: 421  GGKNSYRCTLILTEGDSAKALCTAGLAVENRDYFGVFPLRGKPLNVRDASIKKVMSCAEF 480

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
              + KI+GL    +Y +V+ LRYGHLMIM+DQ                            
Sbjct: 481  QAVSKIMGLDVTQKYTSVEGLRYGHLMIMSDQ---------------------------- 512

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK---NGK--VLSFYSMPDY 613
            DHDGSHIKGL+IN IH++WP LLK+P FL +FITPIVKA  K   NG    +SF+SMPDY
Sbjct: 513  DHDGSHIKGLIINMIHNYWPDLLKVPGFLQQFITPIVKARKKSRGNGDEGAISFFSMPDY 572

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
              WK ++G N  ++ ++YYKGLGTS +KEG+EYF+NI  H+ +FV+ED +D + I +AF+
Sbjct: 573  FEWKNAVGDNIKNYELRYYKGLGTSGAKEGREYFENIDRHRLNFVYEDKKDDDDIIMAFA 632

Query: 674  KKKIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            K K++ RK+W+  F+   ++++   Y    + YS+FV+KELILFS+AD +RSIPS+VDGL
Sbjct: 633  KDKVDERKRWITDFKANTNINESMNYNVRNVTYSEFVHKELILFSVADCERSIPSVVDGL 692

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRKI+F +FKRN ++  KVAQ +GYVSEH+AYHHGEQSL  TI+G+AQD+VG+NNI 
Sbjct: 693  KPGQRKIMFSAFKRNLVRSIKVAQLAGYVSEHAAYHHGEQSLVQTIVGLAQDYVGANNIP 752

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL  +GQFGTR QGGKD A+ RYIFTRL+ I R ++   DD ++DY ++DG  +EP +Y+
Sbjct: 753  LLHRDGQFGTRLQGGKDHAAGRYIFTRLTNIARRIYHPSDDFVVDYKDDDGLSVEPFYYV 812

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            P+IP VLVNG+ GIGTG+++ IPNY+P D++ N+RRLL+G+ + PM PWY GF GTIE+ 
Sbjct: 813  PVIPMVLVNGTAGIGTGFATNIPNYSPLDVIDNLRRLLSGDDLRPMKPWYFGFTGTIEE- 871

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSD 969
              +E G  +  +G      +  + I ELPI  WT  Y++FLE + ++    +  +R+++ 
Sbjct: 872  --REKG-KFVSSGRYTVRPDGVVCITELPIGTWTSQYKKFLEDLRER--EVVVQYREHNT 926

Query: 970  DTTVDFEVFLSEESMMRTKQEGLLK-KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
            D TVDFEVF+  E + +   +G L+ K +L   I  +N+  FD +G I KY   E +L+E
Sbjct: 927  DVTVDFEVFIHPEVLQQWTNQGCLEDKLQLREYIHATNIIAFDREGRITKYLDAESVLKE 986

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ +RLE+Y +R++  LE L+  +LKLEN VRF+  VVNG  VV  R   ++L +L+Q+G
Sbjct: 987  FYLVRLEYYARRREFLLEQLQRSVLKLENMVRFVNEVVNGTFVVTRRPMKEVLADLQQRG 1046

Query: 1089 FTPFP--------------------------KNSKSIEAVVAGATDE----TEESEENPE 1118
            +TPFP                           NS   E  +    DE    +E   E P 
Sbjct: 1047 YTPFPPQQKKKVSSTTINDGEEEEAERRHAAANSADAEEAIVLQPDELMGSSEGEGEAPA 1106

Query: 1119 VVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
            +    +  DYDYLL + +  LT E    LLA  +    + + + K +P+ LW +DLD L 
Sbjct: 1107 LKRSAR--DYDYLLGLRLWNLTAEMSARLLAQLEAARAKYETIAKCSPKDLWREDLDLLQ 1164

Query: 1179 MQLDEL 1184
             ++++L
Sbjct: 1165 PEMEKL 1170


>gi|336270720|ref|XP_003350119.1| TOP2 protein [Sordaria macrospora k-hell]
 gi|380095513|emb|CCC06986.1| putative TOP2 protein [Sordaria macrospora k-hell]
          Length = 1915

 Score = 1127 bits (2916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 602/1263 (47%), Positives = 816/1263 (64%), Gaps = 97/1263 (7%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T   KT  EMYQK +QLEHIL RPDTYIGS+E+  Q +W++ + +  M +R IS+VPGLY
Sbjct: 120  TGAAKTATEMYQKLTQLEHILKRPDTYIGSVERSEQKMWVFNKATGLMENRQISFVPGLY 179

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADN QRD  M  +KV I++E   ISV N+G G+PVEIH  E  YVPELIF
Sbjct: 180  KIFDEILVNAADNSQRDSSMTFLKVSINRESGEISVENNGKGIPVEIHGTEKCYVPELIF 239

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            GHLL  SN+DDN KKT GGRNGYGAKLTNIFS EFI+E  D    K+YKQ +T+NM K S
Sbjct: 240  GHLLAGSNFDDNEKKTVGGRNGYGAKLTNIFSREFILECQDSVNGKRYKQTWTDNMSKMS 299

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
             P I+  K  D + +++F+PD +KF M   ++DD+ AL+ +RV D+AG +   +KV LNG
Sbjct: 300  TPKITSNKAAD-FVRITFRPDFSKFGMADGIDDDLEALLYRRVYDMAGTVS-GIKVWLNG 357

Query: 260  HRVPVKSFAEYVDMYPKSVTRFHERV-------------------NERWEICVTLSEGQF 300
              + + +F  Y  +Y K++ +  + V                    + WE+  T+S+G F
Sbjct: 358  EHLKL-NFKTYCGLYAKAIAKERDEVADGEDVTPATVIFEQQRSEGKLWEVGFTVSDGSF 416

Query: 301  QQVSFVNGIATIKGGTHVDYVANQVANHVMA-VVNKKNKNANVKAHNVKNHLWVFVNALI 359
            QQVSFVN IAT  GG+HV+Y+A+Q+   +M  +  KK K   +K  NVKN  ++F+N LI
Sbjct: 417  QQVSFVNNIATTSGGSHVNYIADQIIEVLMKELQRKKGKGHGLKTANVKNQFFIFINCLI 476

Query: 360  DNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKND 419
            DNPAF SQTKE LT + + FGSKC+L ++FLKKV  +S  ++ LLS+A+ K+ KDL KND
Sbjct: 477  DNPAFSSQTKEQLTTKPARFGSKCQLGDQFLKKVR-QSEAIDNLLSFADKKRDKDLAKND 535

Query: 420  GTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRG 479
            G+K + +    KL +AN AGG+ S++CTLILTEGDSA+ LA+AG +++  +R GVFPLRG
Sbjct: 536  GSKRKRISN-DKLIEANYAGGKYSQECTLILTEGDSARGLAVAGRAILDPNRIGVFPLRG 594

Query: 480  KLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFL 539
            K+LNVR+AS++Q+L N E+ NIKK LGLK G  Y + K LRYGHLMIM DQ         
Sbjct: 595  KMLNVRDASADQILKNKEVENIKKFLGLKHGKVYTDTKDLRYGHLMIMADQ--------- 645

Query: 540  LWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA-- 597
                               D DGSHIKGLLINF    +PSLL+IP+F  EFITP+VK   
Sbjct: 646  -------------------DLDGSHIKGLLINFFECQFPSLLRIPNFFQEFITPVVKVWQ 686

Query: 598  ---TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHK 654
                 K  K+  F+++P YE WKES       W  KY KGLG+ST+ + + YF N+T H 
Sbjct: 687  GPNPRKPQKLQGFFTLPQYEEWKESHKNELRRWKYKYLKGLGSSTTDDAQIYFTNLTKHL 746

Query: 655  KDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFS 714
            K+F     ++ E  ELAFSKKK +ARK+WL + EPG +LD   + I Y+DFVN+ELILFS
Sbjct: 747  KEFDVMTREESEMFELAFSKKKADARKEWLAKCEPGTYLDHSTEKISYTDFVNRELILFS 806

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
            MAD  RSIPSMVDGLKPGQRK+LF  FK+N I + KV + +GYVS+ +AYHHGEQSL  T
Sbjct: 807  MADNIRSIPSMVDGLKPGQRKVLFGCFKQNLIHDQKVVELAGYVSKEAAYHHGEQSLQQT 866

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+G+AQ+FVGSNNIN L+P+G FG+R  GG DAASARYI TRLSP+ R +F   D+  L+
Sbjct: 867  IVGLAQNFVGSNNINCLEPSGNFGSRLSGGSDAASARYIHTRLSPLARKIFHPLDEPNLE 926

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL------N 888
            +  +DG+ IEP  Y PI+P VLVNG++GIGTGWS+ IPNY+P DIV N++R +      +
Sbjct: 927  FQFDDGKLIEPKVYAPILPMVLVNGADGIGTGWSTSIPNYHPLDIVENLKRRMGRDSSGD 986

Query: 889  GE--MMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIE--EVNETTLRIKELPIRRWTQ 944
            GE    EPM PW+RG+ GT E     +    +   GI+E    N   + + ELPIR WT 
Sbjct: 987  GEEKPFEPMTPWFRGWKGTPEPDGPNK----FKFNGIVEVNPQNPNEVDVTELPIRMWTD 1042

Query: 945  DYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTI 1002
            D++  LE II  D+  S+I+ +++Y+D  TV F + L E+ M    ++GL++KFKLT T+
Sbjct: 1043 DFKSKLEEIIRGDKGPSWIKDYKEYNDHQTVHFIIALEEKQMSSALRDGLIEKFKLTKTV 1102

Query: 1003 STSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFI 1062
            +T+N+  FD++G I KY+ P++I+EE++H RL  Y +RKK  L+    +  KL+N+ RFI
Sbjct: 1103 ATTNLVAFDTRGKIYKYENPQEIMEEYYHYRLNLYGERKKHWLKVYHADYRKLQNQYRFI 1162

Query: 1063 LGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-----KNSKSIEAVVAGATDETEESEENP 1117
              ++  +++V  +K++ L+ ELR++ +  FP     +N KS +  +  A +E EE     
Sbjct: 1163 SEIIENKLIVAKKKKSVLVQELRERKYEAFPPKSDGRNVKSPDEELGAAENEDEE----- 1217

Query: 1118 EVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            + V G +  DYDYLLSM I +LT E++  L         E D+L   + + LW KDLDA 
Sbjct: 1218 DAVGGAR--DYDYLLSMPIWSLTFERLDKLKQQIAAKKAEYDELDALSEKDLWCKDLDAF 1275

Query: 1178 DMQLDELDKSDARAEEE-RMKIKGNGN-----GDAGPKIVAKRAPKNARKNDKKSNNARA 1231
              + +E      R E+E R +I+  G      G A  ++   RA K+    +  +   RA
Sbjct: 1276 TAEWEE----QLRLEDEVRKEIRQKGRRVSYKGGAVSRLKKPRAAKDDEDFEPGAKKPRA 1331

Query: 1232 TEA 1234
              A
Sbjct: 1332 KAA 1334


>gi|47226022|emb|CAG04396.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1345

 Score = 1127 bits (2915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1273 (48%), Positives = 818/1273 (64%), Gaps = 142/1273 (11%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPD+YIGS+E  TQ +W+Y+E+   +  R +++VPGLYKIFDE
Sbjct: 20   SVERIYQKKTQLEHILLRPDSYIGSVEPVTQQMWVYDEDV-GLNCRDVTFVPGLYKIFDE 78

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E++ I + N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 79   ILVNAADNKQRDKTMSCIKVSIDVENNTIVIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 138

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  + NI 
Sbjct: 139  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKESKKTFKQTWYDNMGRAGDANI- 197

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            +  +G+ +T ++F+PDLAKF M+ L+ D VALM +R  D+AG   K ++V  NG ++PV 
Sbjct: 198  RSFDGEEYTCITFRPDLAKFKMSILDKDTVALMTRRAYDIAGST-KGIRVYFNGKKLPVC 256

Query: 266  S------------------------------------------------FAEYVDMYPK- 276
                                                             F  YVD+Y K 
Sbjct: 257  CGFTCVDRWCHRKGEFTTSEKMCGLFNVCGHYMSLCEIRMIVFIFQVTGFRSYVDLYVKD 316

Query: 277  -------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHV 329
                   ++   HE VNERWE+C+T+SE  FQQVSFVN IAT KGG HVDYVA+QV + +
Sbjct: 317  KVDEMGNALNVVHEVVNERWEVCLTMSEKGFQQVSFVNSIATTKGGRHVDYVADQVVSKL 376

Query: 330  MAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEE 388
            + VV KKNK    VK   VKNH+W+FVN L++NP FDSQTKE +TL+Q SFGS C LS++
Sbjct: 377  IEVVKKKNKAGVAVKPFQVKNHMWLFVNCLVENPTFDSQTKENMTLQQKSFGSTCPLSDK 436

Query: 389  FLKKVTAKSGIVETLLSWANFK-QSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCT 447
            F+K+ TA SGIVE++++W  FK QS+  KK    K   ++G+ KL+DAN AGG+NS  CT
Sbjct: 437  FIKQATA-SGIVESIMNWVKFKAQSQLNKKCSAVKHTKIKGVPKLDDANDAGGKNSIGCT 495

Query: 448  LILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGL 507
            LILTEGDSAK LA++GL VVGRDR+GVFPLRGK+LNVREAS  Q++ N+EI NI KILGL
Sbjct: 496  LILTEGDSAKTLAVSGLGVVGRDRYGVFPLRGKMLNVREASLKQIMENAEINNIIKILGL 555

Query: 508  KQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSH 564
            +    Y++   +K+LRYG +MIMTDQ                            D DGSH
Sbjct: 556  QYKKNYSDPESLKTLRYGKIMIMTDQ----------------------------DQDGSH 587

Query: 565  IKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNA 624
            IKGLLINFIH  WPSLL+  +F+ EFITPI+KA++K  + LSFYS+P++ AWKES   N 
Sbjct: 588  IKGLLINFIHHNWPSLLR-HNFIEEFITPIIKASHKKTQ-LSFYSIPEFSAWKES-QANH 644

Query: 625  SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
             SW IKYYKGLGTSTS+E KEYF ++  H+  F +   +D EAI LAFSKKK+E RK+WL
Sbjct: 645  KSWKIKYYKGLGTSTSQEAKEYFSDMQRHRIPFKYAGPEDDEAITLAFSKKKVEERKEWL 704

Query: 685  LQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
             +F            P ++L  Q  KY+ Y+DFVNKEL+LFS +D +RSIP +VDGLKPG
Sbjct: 705  TKFMINRRQRREHNLPEDYLYGQTTKYLSYNDFVNKELVLFSNSDNERSIPCLVDGLKPG 764

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+LFC FKRN  +E KVAQ +G V+E SAYHHGE SL  TI+G+AQ+FVGSNN+NLLQ
Sbjct: 765  QRKVLFCCFKRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQNFVGSNNLNLLQ 824

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P GQFGTR  GGKD+AS RYIFT LS + R +FP  DD LL Y  +D Q++EP WY+PII
Sbjct: 825  PLGQFGTRLHGGKDSASPRYIFTMLSSLARLVFPPVDDNLLKYNYDDNQRVEPEWYIPII 884

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P VLVNG+EGIGTGW+S IPNY+ R+IV N+ R+L+G+   PM P Y+GF GTIE+  + 
Sbjct: 885  PMVLVNGAEGIGTGWASKIPNYDIREIVNNIHRMLSGDEPLPMLPNYKGFKGTIEQVMNN 944

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQNDS---FIRGFRQYS 968
            +    Y  +G +  ++ TT+ I ELP++ WTQ Y+E  LE +++  +     I  F++Y 
Sbjct: 945  Q----YMNSGEVAIIDSTTIEISELPVKAWTQTYKENVLEPMLNGTEKVPPLITDFKEYH 1000

Query: 969  DDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL-- 1026
             DTTV F V +SEE +   +  G  K FKL   ++ ++M              PE++   
Sbjct: 1001 TDTTVRFVVRMSEEKLREAEAAGFHKVFKLQNPLTCNSM--------------PEEVRVC 1046

Query: 1027 ----EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLL 1082
                ++FF +R+++Y  RK   +  L  E  KL N+ RFIL  + G +V+ N+ + +L+ 
Sbjct: 1047 AGYSQDFFELRMKYYVLRKDWLVGMLGAESAKLTNQARFILEKIQGTLVIENKPKKELIR 1106

Query: 1083 ELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLE 1142
             L+Q G+   P  +  + A      +  E+ EE           DY+YLLSM +  LT E
Sbjct: 1107 MLQQMGYDSDPVKAWKL-AQEKNEDETLEDQEEEEGKEEEASGPDYNYLLSMPMWFLTKE 1165

Query: 1143 KVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKI--KG 1200
            K + L   RD    E++ L+K +P  LW +DL A     +EL+ S+A+ +E       KG
Sbjct: 1166 KKEELCKQRDAKLTELNTLKKKSPADLWKEDLAAFS---EELESSEAKEKENAAAPVKKG 1222

Query: 1201 NGNGDAGPKIVAK 1213
             G G +   +V K
Sbjct: 1223 AGKGKSSEDVVMK 1235


>gi|114145437|ref|NP_001041456.1| transcription factor [Ciona intestinalis]
 gi|93003262|tpd|FAA00214.1| TPA: transcription factor protein [Ciona intestinalis]
          Length = 1538

 Score = 1127 bits (2915), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 603/1240 (48%), Positives = 816/1240 (65%), Gaps = 101/1240 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQA+W+Y+E  + M++R I++VPGLYKIFDE
Sbjct: 20   SVERIYQKKTQLEHILLRPDTYIGSVEPVTQAMWVYDE-GEGMVNREITFVPGLYKIFDE 78

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  +K+ I+ E +LISV N G G+PV  H+ E +YVPE+IFGHLLT
Sbjct: 79   ILVNAADNKQRDPKMSTIKITINPEKNLISVWNDGKGIPVVEHKGEKMYVPEMIFGHLLT 138

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA       + Q ++ NM K  +  I 
Sbjct: 139  SSNYDDDDKKVTGGRNGYGAKLCNIFSTKFKVETASKDEKMYFSQSWSKNMSKAHDKKIV 198

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
              ++ D +T V+F PDL KF+M  L+ D VAL+ +R  D+AG     VKV LNG ++PVK
Sbjct: 199  SYEKPD-FTCVTFHPDLEKFHMESLDKDTVALLSRRAYDIAGSTS-GVKVFLNGSKLPVK 256

Query: 266  SFAEYVDMYPKSVTR--------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            +F +YV +Y   +           HE+VN RWEIC+T S+  FQQVSFVN IAT KGG H
Sbjct: 257  NFKDYVQLYVAQMRDDNGEPFKVIHEQVNPRWEICLTSSDKGFQQVSFVNSIATTKGGRH 316

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
             DYV +QV   ++ VV +KNK    VK   +KNH W+FVN LI+NP FDSQTKE +TL+ 
Sbjct: 317  TDYVIDQVTKKLIEVVKRKNKGGVEVKPFQIKNHCWLFVNCLIENPTFDSQTKENMTLQA 376

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
              FGSKC L+E+FLK + + SGIV+ +++W  FK    L+K    K+  ++G+ KL+DAN
Sbjct: 377  KKFGSKCNLTEKFLK-MASSSGIVDNIMNWVKFKAQSQLQKKSAGKSNKLKGVPKLDDAN 435

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AG R+S  CTLILTEGDSAK LA++GLSV+GRD++GVFPLRGKLLNVR+AS  Q+++N 
Sbjct: 436  DAGTRHSLDCTLILTEGDSAKTLAVSGLSVIGRDKYGVFPLRGKLLNVRDASHKQIMDNI 495

Query: 497  EIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            EI +I KI+GLK   +Y   +++KSLRYG LMIMTDQ                       
Sbjct: 496  EINHIIKIMGLKYNKKYETDDDLKSLRYGKLMIMTDQ----------------------- 532

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
                 DHDGSHIKGLLINFIH+ WP +L+    L EFITPIVK T K  +VL FY++P++
Sbjct: 533  -----DHDGSHIKGLLINFIHTNWPKMLQ-RRMLEEFITPIVKVT-KGSQVLCFYTIPEF 585

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
            E W+ ++  N  SW +KYYKGLGTSTSKE K YF ++  H+  F +    D   I++AF+
Sbjct: 586  EDWQNTIE-NPKSWKVKYYKGLGTSTSKEAKSYFADMLRHRVRFRYSGAGDDGCIDMAFN 644

Query: 674  KKKIEARKKWLLQF-------------EPGNHLDQKE-KYIKYSDFVNKELILFSMADLQ 719
            +K+ + RK+WL  F             EPG  L   + + + YSDF+NKEL++FS ADL+
Sbjct: 645  RKRADDRKEWLTNFMEERRLCRLDDRPEPGTDLYSADTRTLSYSDFINKELVMFSCADLE 704

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RS+PS+ DGLKPGQRK+L+   +RN  +E KVAQ +G V+E SAYHHGEQSL  TI+ MA
Sbjct: 705  RSVPSLCDGLKPGQRKVLYTCLRRNDKREVKVAQLAGSVAELSAYHHGEQSLLGTIINMA 764

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q++VGSNN+NLLQP GQFGTR  GGKDAAS RYIFT LSP+TR LFP+ D+ LL +  +D
Sbjct: 765  QNYVGSNNLNLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLTRLLFPQVDENLLTWQYDD 824

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP+WY PIIPTVLVNG+EGIGTGWS+ +PN++ R++V N++RL+NGE   PM P Y
Sbjct: 825  NQKVEPSWYCPIIPTVLVNGTEGIGTGWSTRVPNHDIREVVKNIKRLINGEEPVPMLPSY 884

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTIE+  +      Y V+G    +++ T+ I ELPI+ WTQ Y+E  LE ++   D
Sbjct: 885  KNFRGTIEEVEANR----YVVSGEAALIDDQTVEITELPIKSWTQAYKESVLEPLVAGTD 940

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN-MHLFDSKG 1014
            +    I  +++Y+ D TV F V +  + +   ++ GL K   L  ++S +N + LFD  G
Sbjct: 941  KAPQQILEYKEYNTDITVRFLVKMGADKLKTMERSGLHKFLSLQNSLSCNNTLVLFDEFG 1000

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             ++K++T  +IL EF+ IR + YEKRK      L  E  KL N+ RFI+  + G+I + N
Sbjct: 1001 RLRKFNTTVEILLEFYKIRSKLYEKRKDFLTGLLTAEAAKLTNQARFIVEKIEGKISIFN 1060

Query: 1075 RKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +  L+  L    +   P    KNS + +     + +E EE E+N       +  D++Y
Sbjct: 1061 KPKKVLIKMLVDNNYDSDPVKAWKNSIAKKVEERASDEEEEEVEDN-------KGPDFNY 1113

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            +LSM + +L+ E+   LL  RD    E+++L+K TP  LW+ DLD     ++ELDK + +
Sbjct: 1114 ILSMPLWSLSKERKDELLKQRDAKCGELEELKKKTPTRLWLDDLDKF---MEELDKVEQK 1170

Query: 1191 AEEERMK-------------IKGNGNGDAGPKIVAKRAPK 1217
              E+ M              +KG G G    K+V K+  K
Sbjct: 1171 EREDAMMSTEDAPKKKTMFGVKGRGKG----KMVEKKETK 1206


>gi|341880169|gb|EGT36104.1| hypothetical protein CAEBREN_03194 [Caenorhabditis brenneri]
          Length = 1547

 Score = 1126 bits (2913), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 597/1214 (49%), Positives = 799/1214 (65%), Gaps = 88/1214 (7%)

Query: 19   GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQA-LWIYEEESKTMIHRTISYVP 77
            G  +    IE++YQKKSQLEHILLRPDTYIGS+E   +  +W+Y  E   +  R I YVP
Sbjct: 55   GGGSKKMAIEDIYQKKSQLEHILLRPDTYIGSVEYTERTPMWVYNTEKSQLEQREIKYVP 114

Query: 78   GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
            GLYKIFDEILVNAADNKQRD KM+ +KV ID+E +LISV+N+G G+PV  H+ E VYVPE
Sbjct: 115  GLYKIFDEILVNAADNKQRDSKMNTIKVTIDKERNLISVYNNGKGIPVTQHKVEKVYVPE 174

Query: 138  LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
            LIFG LLTSSNY+D+ KK TGGRNGYGAKL NIFST+F++ET+  +  +++KQ + NNM 
Sbjct: 175  LIFGTLLTSSNYNDDEKKVTGGRNGYGAKLCNIFSTKFVLETSSKEFGQQFKQTWINNMT 234

Query: 198  KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL 257
            +  +P I K   G+++TK++F PDL KF M  L+DD+  LM +R  D+AG   K V V L
Sbjct: 235  RDKDPEIKK-NTGEDFTKITFSPDLTKFKMDELDDDICHLMARRAYDVAGST-KGVTVFL 292

Query: 258  NGHRVPVKSFAEYVDMYPKSVTR-------FHERVNERWEICVTLSEGQFQQVSFVNGIA 310
            NG R+PVK F +YV MY    T         +E+V +RW++ + LSE  FQQVSFVN IA
Sbjct: 293  NGERIPVKGFEDYVKMYTSQFTNDGEPIKVAYEQVGDRWQVALALSEKGFQQVSFVNSIA 352

Query: 311  TIKGGTHVDYVANQVANHVMAVVNKK--NKNANVKAHNVKNHLWVFVNALIDNPAFDSQT 368
            T KGG HVDYVA+Q+    +  + +K    + N+K   +KNH+WVFVNALI+NP FDSQT
Sbjct: 353  TTKGGRHVDYVADQMVTKFIDSIKRKLSKTSMNIKPFQIKNHMWVFVNALIENPTFDSQT 412

Query: 369  KETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVR 427
            KET+TL+   FGS C LSE+F  K  +  GI + ++SW  FKQ  DL KK   TKT  ++
Sbjct: 413  KETMTLQSKQFGSTCVLSEKF-SKAASNVGITDAVMSWVRFKQMDDLNKKCSKTKTSKLK 471

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
            GI KLEDAN AG +NS+QCTLILTEGDSAK LA+AGL+VVGRD++GVFPLRGKLLNVR+ 
Sbjct: 472  GIPKLEDANDAGTKNSQQCTLILTEGDSAKTLAVAGLAVVGRDKYGVFPLRGKLLNVRDG 531

Query: 488  SSNQVLNNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            +  Q+ +N+EI  + KILGL+   +Y    + KSLRYG LM+M DQ              
Sbjct: 532  NMKQIADNAEINAMIKILGLQYKKKYETEEDFKSLRYGKLMVMADQ-------------- 577

Query: 545  IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV 604
                          D DGSHIKGL+INF+H FWPSL++  +F+ EFITPIVKAT K  + 
Sbjct: 578  --------------DQDGSHIKGLVINFVHHFWPSLIQ-RNFVEEFITPIVKAT-KGKEE 621

Query: 605  LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD 664
            +SF+S+P+Y  W+ +   N  ++ IKYYKGLGTSTSKE KEYF ++  H+  F +    D
Sbjct: 622  VSFFSIPEYAEWRMNTD-NWKTYKIKYYKGLGTSTSKEAKEYFSDMLRHRIRFKYGGGDD 680

Query: 665  GEAIELAFSKKKIEARKKWLLQFEPGNHLDQKE------------KYIKYSDFVNKELIL 712
              A+++AFSKKKIE RK WL ++     + +++            + + Y DFVN+EL+L
Sbjct: 681  DAAVDMAFSKKKIEERKDWLTKWMQEKKVRKQQGLADEYLYNKDTRSVSYKDFVNRELVL 740

Query: 713  FSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLA 772
            FS  D +RSIP +VDG KPGQRK+LF  FKR   +E KVAQ +G V+E SAYHHGEQSL 
Sbjct: 741  FSNLDNERSIPCLVDGFKPGQRKVLFACFKRADKREVKVAQLAGAVAELSAYHHGEQSLM 800

Query: 773  STILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKL 832
             TI+ +AQDFVGSNN+NLL P GQFGTR QGGKD+ASARYIFT+LSP+TR +FP  DD +
Sbjct: 801  GTIVNLAQDFVGSNNVNLLLPIGQFGTRLQGGKDSASARYIFTQLSPVTRSIFPAHDDNV 860

Query: 833  LDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMM 892
            L +L E+ Q+IEP WY P+IP VLVNG++GIGTGWS+ IPNYNPRDIV NV+RL+ GE  
Sbjct: 861  LRFLYEENQRIEPEWYCPVIPMVLVNGAQGIGTGWSTNIPNYNPRDIVKNVKRLIAGEAQ 920

Query: 893  EPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLE 951
            + + PWY+GF G I +  S      +   G +  +++ T+ I ELP+++WTQDY+E  LE
Sbjct: 921  KALSPWYKGFRGNIIQIDSSR----FACYGEVAVLDDNTIEITELPVKQWTQDYKEKVLE 976

Query: 952  SIIDQNDS---FIRGFRQYSDDTTVDFEVFLSEESMMRT-KQEGLLKKFKLTTTISTSNM 1007
            ++++ +D     I  +++Y  D TV F V L+   +    + + L + FKL   I+T+ M
Sbjct: 977  TLLESSDKKTPIITDYKEYHTDITVKFVVKLTPGKLRELERSQELHQVFKLQQVINTTCM 1036

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVN 1067
             LFD+ G ++ Y +PE+I +EFF  R E Y +RK+  +  LE +  +L N+ RFIL  +N
Sbjct: 1037 VLFDAAGCLRTYTSPEEICQEFFECRKEKYIQRKEYLVGVLEAQSKRLTNQARFILAKIN 1096

Query: 1068 GEIVVNNRKRTDLLLELRQKGFTPFP-------------KNSKSIEAVVAGATDETEESE 1114
             EIV+ N+K+  ++  L +  F P P             + S  IE           ES+
Sbjct: 1097 NEIVLENKKKASIVETLIKMKFDPDPVKKWKEEQKLKELRESGEIELDEEEQAAADAESD 1156

Query: 1115 -ENPEVVNGVQSI-----DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPES 1168
             E     +  +++     DYDYL+ MA+  L+ E+   L+ + +    E+  L K T + 
Sbjct: 1157 GEGTSSSSASKAVETKLSDYDYLVGMALIKLSEEEKNKLIKESEDKLAEMKTLEKKTWQD 1216

Query: 1169 LWVKDLDALDMQLD 1182
            LW +DLD   ++LD
Sbjct: 1217 LWHEDLDKFIVELD 1230


>gi|330801777|ref|XP_003288900.1| hypothetical protein DICPUDRAFT_4475 [Dictyostelium purpureum]
 gi|325081045|gb|EGC34576.1| hypothetical protein DICPUDRAFT_4475 [Dictyostelium purpureum]
          Length = 1162

 Score = 1126 bits (2912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 599/1194 (50%), Positives = 805/1194 (67%), Gaps = 80/1194 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+EE+YQKK  L+ ILLRPDTYIGS EK  + LW++E E   M+ R +S+VPG+YKIFD
Sbjct: 2    KTLEEIYQKKELLDQILLRPDTYIGSTEKQEEELWVWENER--MVRRKVSFVPGIYKIFD 59

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQR+  M  +KV ID  +  ISV N G G+P+ IH+E  VY+PELIFGHLL
Sbjct: 60   EILVNAADNKQREETMKFIKVEIDSANGRISVTNDGAGIPIHIHKEHKVYIPELIFGHLL 119

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSS+YDD+ K+ TGGRNG+GAKL NIFST+FI+E AD    K YKQVFTNNM  K +P I
Sbjct: 120  TSSHYDDSEKRLTGGRNGFGAKLANIFSTKFIVECADSGSKKLYKQVFTNNMRNKEDPKI 179

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +      N+TK++F P+L++F M   ++D++AL+ KRV D+AGC   ++KV LN   + +
Sbjct: 180  TSYSNKTNYTKITFYPELSRFGMVSFDEDLIALLSKRVYDIAGC-NPTLKVSLNDQELGI 238

Query: 265  KSFAEYVDMY-------PKSVTRFHERVNERWEICVTLS-EGQFQQVSFVNGIATIKGGT 316
            +SF +YV++Y       PK    ++E+V+ RWEI VTLS EGQFQQVSFVN I T+KGGT
Sbjct: 239  RSFEKYVNLYFPDADDAPKV---YYEKVSPRWEIAVTLSTEGQFQQVSFVNSICTVKGGT 295

Query: 317  HVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            HV +  ++V + +   V KK+K   +K   VKNHL+VFVN+LI+NP FDSQTKETLT + 
Sbjct: 296  HVTHALSKVISEITEAVLKKHKGGEIKPAFVKNHLFVFVNSLIENPHFDSQTKETLTSKI 355

Query: 377  SSFGSKCELSEEFLKKVT-AKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDA 435
            +SFGS+CE SE+FLKKV  +KSGI+ T+L++  FK+ + +K +     +     SKL+DA
Sbjct: 356  TSFGSRCEPSEKFLKKVIDSKSGIIATILAFVEFKEQQSIKSSSKPGKKGKVTHSKLDDA 415

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            +LAG   S  CTLILTEGDSAK LA+AG+SVVG+D +G FPL+GKLLNVRE    + L N
Sbjct: 416  SLAGSSKSADCTLILTEGDSAKTLAIAGISVVGKDHYGAFPLKGKLLNVRE-QGQKALKN 474

Query: 496  SEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFM 555
             EI NI  ILGL+  V+Y +V  LRYGHLMIMTDQ                         
Sbjct: 475  DEICNIMMILGLQPFVKYEDVSKLRYGHLMIMTDQ------------------------- 509

Query: 556  LAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSMPDYE 614
               D+DGSHIKGL+INFIH FWP LL +P FLVEFITPIVK + KNGK  +SFY++P++ 
Sbjct: 510  ---DNDGSHIKGLIINFIHHFWPQLLHMPGFLVEFITPIVKVS-KNGKNAISFYTLPEFL 565

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
             W+E    N   W IKYYKGLGTS + EGKEYF ++  HK DF W+D  D  +I+LAFSK
Sbjct: 566  EWREK---NPKGWDIKYYKGLGTSQASEGKEYFSDLEKHKIDFEWDDKAD-TSIDLAFSK 621

Query: 675  KKIEARKKWLLQFEPGNHLDQKE-KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQ 733
             K + RKKW+ +   G +L+Q     + Y+DF+NKELILFS+AD +RSIPS+VDGLK  Q
Sbjct: 622  SKADERKKWMAEHVEGTYLEQYGVGKLSYTDFINKELILFSIADCERSIPSIVDGLKTSQ 681

Query: 734  RKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQP 793
            RKIL+  FKRN  KE KVAQ  GYVSEHSAYHHGE SL STILGMAQ+++GSNN NLL P
Sbjct: 682  RKILYSCFKRNLKKEIKVAQLIGYVSEHSAYHHGEMSLYSTILGMAQEYIGSNNANLLYP 741

Query: 794  NGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIP 853
            +G +GTR QGGKDA+SARYI TRL+ + R L+  DDD +L  + +DG++++P  Y+PIIP
Sbjct: 742  SGAYGTRIQGGKDASSARYIHTRLTDVARALYHPDDDNILACVVDDGKKVQPKHYIPIIP 801

Query: 854  TVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKE 913
             +LVNG+ GIGTGWS+ IP+YNPRD+V N++ LLN + ++P+ PWYRGF G I ++    
Sbjct: 802  MILVNGTVGIGTGWSTTIPSYNPRDLVENMKLLLNKQELKPIQPWYRGFTGEILESGK-- 859

Query: 914  AGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTV 973
             G  Y   G+  +++E +  + ELPI  WTQDYREFL    D+ ++     ++  +    
Sbjct: 860  -GGQYLSRGVWRKLSEHSFEVTELPINSWTQDYREFL----DELETPGTKKKRKEEKEKK 914

Query: 974  DFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIR 1033
              +      +  + K + + K FKL++TI+ +NM +FD +G I+++ T + I E FF +R
Sbjct: 915  KGKRSSKSTTTKKPKSKTIEKIFKLSSTINETNMVVFDEEGRIQRFATTQLIQEHFFGLR 974

Query: 1034 LEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP 1093
            +++Y+KRK    E L  E  KL+NK RFIL V+N EI +NN K+ D++ +L++  F    
Sbjct: 975  MKYYQKRKDYLAEKLSEEFKKLDNKARFILAVINKEIAINNVKKVDIMKKLKEMKFDMI- 1033

Query: 1094 KNSKSIEAVVAGATDETEESEENPEVV--------------NGVQSID----YDYLLSMA 1135
              +KSIE +V     + + S +  + V               G +  D    YDYLLSM 
Sbjct: 1034 -YNKSIEKIVKEKLKKKKGSFDEEDAVDSDGEEKDDDETDETGSKKSDEERGYDYLLSMP 1092

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPES-LWVKDLDALDMQLDELDKSD 1188
            + TLT+E+V+ ++ ++D+  +E  D+   TP S  + +DL  ++  LD  D  D
Sbjct: 1093 LWTLTMERVKKIIEEKDQKKKEW-DIHLGTPLSDFYNRDLILVEKALDAQDAYD 1145


>gi|431890663|gb|ELK01542.1| DNA topoisomerase 2-alpha [Pteropus alecto]
          Length = 1484

 Score = 1126 bits (2912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1200 (49%), Positives = 798/1200 (66%), Gaps = 108/1200 (9%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 17   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDI-GINYREVTFVPGLYKIFDE 75

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 76   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 135

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KKT                                   + +NMG+  E  + 
Sbjct: 136  SSNYDDDEKKT-----------------------------------WMDNMGRAGEMEL- 159

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 160  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 218

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 219  GFRSYVDMYLKDKVDETGNPLKIIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 278

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 279  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQV 338

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             +FGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 339  KNFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQIQLNKKCSAVKHNRIKGIPKLDDA 397

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS +CTLILTEGDSAK LA++GL VVGRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 398  NDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDRYGVFPLRGKILNVREASHKQIMEN 457

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 458  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 495

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 496  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 547

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 548  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 606

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 607  SKKQIDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 666

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 667  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 726

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L +L +D 
Sbjct: 727  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPQDDHTLKFLYDDN 786

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+R L++GE   PM P Y+
Sbjct: 787  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDIREVVNNIRLLMDGEEPLPMLPSYK 846

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 847  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 902

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 903  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 962

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 963  KKYDTALDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1022

Query: 1077 RTDLLLELRQKGFTPFPKNS--KSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSM 1134
            + +L+  L Q+G+   P  +  ++ + V     +E  ++E+  E  + V    ++YLL M
Sbjct: 1023 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTGPTFNYLLDM 1082

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
             +  LT EK   L   R +  +E++ L+K +P  LW +DL A    ++EL+  +A+ +++
Sbjct: 1083 PLWYLTKEKKDELCKLRKEKEQELETLKKKSPSDLWKEDLAAF---IEELETVEAKEKQD 1139


>gi|38453805|dbj|BAD02203.1| DNA topoisomerase II [Arthroderma fulvum]
          Length = 1086

 Score = 1125 bits (2911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1127 (51%), Positives = 777/1127 (68%), Gaps = 61/1127 (5%)

Query: 33   KKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAAD 92
            K +QLEHIL RPDTYIGS+E+  + +W+Y   ++ M +R +S+VPGLYKIFDEILVNAAD
Sbjct: 1    KITQLEHILKRPDTYIGSVERTEKHMWVYNSTTELMEYREVSFVPGLYKIFDEILVNAAD 60

Query: 93   NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN 152
            NKQ D  M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D 
Sbjct: 61   NKQNDSNMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEHIYIPELIFGHLLTSSNYNDM 120

Query: 153  VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             +K TGGRNGYGAKL NIFSTEF +ETAD    KK+K  +TNNM    +  I++ K GD+
Sbjct: 121  QEKVTGGRNGYGAKLCNIFSTEFTVETADSSNKKKFKLTWTNNMSTMGKAKITESK-GDD 179

Query: 213  WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            +TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG R+P+K+F +Y++
Sbjct: 180  YTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTTVK--LNGTRIPIKTFKKYME 237

Query: 273  MYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
            MY K++                 E  + RWEI  T+S+G FQQVSFVN IAT  GGTHV+
Sbjct: 238  MYTKAIKTERGEDPTSDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTHVN 297

Query: 320  YVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            Y+++Q+ N +   + KKNK  A +K   +KNH+++FVN+ I NPAF SQTKE LT R S 
Sbjct: 298  YISDQICNKLADALKKKNKTGATLKPAQIKNHIFLFVNSQIVNPAFTSQTKEQLTTRSSQ 357

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLA 438
            FGSKC +S++FLKKV  K+ +++ +L +A  K  + LKK DG +   +    KL DAN A
Sbjct: 358  FGSKCIVSDDFLKKV-MKTRVMDDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDANKA 415

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            G +    CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  N+EI
Sbjct: 416  GTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNAEI 475

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
             NIK  +GL+   EY + + LRYGHLMIMTDQ                            
Sbjct: 476  QNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ---------------------------- 507

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPDYE 614
            DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++P+YE
Sbjct: 508  DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHSKSFFTLPEYE 567

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
             WKE+   +   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAFSK
Sbjct: 568  EWKEA-HAHDKKWQKKYYKGLGTSSTEDAQVYFQDLDRHLKQFHTLQDKEAELIELAFSK 626

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            KK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPGQR
Sbjct: 627  KKADERKEWLRQFKPGTYLDHSMDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQR 686

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+P+
Sbjct: 687  KVLYTMFKRNVRKDIKVVELAGYVSGMTAYQHGDNSLHTTIVGLAQTFVGSNNINCLEPS 746

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++P 
Sbjct: 747  GNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNVDDGKVIEPETYVPVVPL 806

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            +L+NG++GIGTGWS+ IPNYNP D+V N++RL+ G+ + PM PW+RGF G  E T S   
Sbjct: 807  ILINGADGIGTGWSTSIPNYNPEDVVDNLKRLMAGDELVPMKPWFRGFKG--EVTGS--- 861

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTT 972
            G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ ++ Y+  T 
Sbjct: 862  GDRYKFSGIIKQTGDNEVEISELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYKDYNTHTN 921

Query: 973  VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
            V F + + E+ M +  +EGL +KFKL   I+TSNM  FD +G I +Y+TPE IL  F+ +
Sbjct: 922  VHFIIQMEEKHMKKAVEEGLEEKFKLVKQIATSNMVAFDPEGRITRYETPEDILRAFYAV 981

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++KGF PF
Sbjct: 982  RIKLYEKRKQHLLSELQTQLDKLSNQARFVQMIIDGKLVISKKKKALLIQELQEKGFKPF 1041

Query: 1093 PKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            PK   + EA    A D  +E +E       + S  YDYLLSM + +L
Sbjct: 1042 PKVVDTPEA--GEAGDVEDEEDEEEAAAAALSSDAYDYLLSMPLWSL 1086


>gi|268531746|ref|XP_002631000.1| Hypothetical protein CBG02746 [Caenorhabditis briggsae]
          Length = 1506

 Score = 1125 bits (2910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 613/1291 (47%), Positives = 837/1291 (64%), Gaps = 102/1291 (7%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQA-LWIYEEESKTMIHRTISYVPGLYKIFDE 85
            IE++YQKKSQLEHILLRPDTYIGS+E   Q  +W++  E   +  R I YVPGLYKIFDE
Sbjct: 61   IEDIYQKKSQLEHILLRPDTYIGSVEYTEQTPMWVFNTEKNQLEQRDIRYVPGLYKIFDE 120

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM+ +KVVID+E + ISV+N+G G+PV +H+ E VYVPELIFG LLT
Sbjct: 121  ILVNAADNKQRDPKMNTIKVVIDKERNSISVYNNGKGIPVTLHKVEKVYVPELIFGTLLT 180

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKL NIFST+F +ET+  +  KK+ Q +  NM K+++P++ 
Sbjct: 181  SSNYNDDEKKVTGGRNGYGAKLCNIFSTKFKLETSSKEYHKKFSQTWVKNMTKEADPDVE 240

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++TK++F PDL+KF M  L+DD+  LM +R  D+AG   K V V LNG R+PVK
Sbjct: 241  KST-GEDFTKITFSPDLSKFKMKELDDDICHLMARRAYDVAGST-KGVTVFLNGERIPVK 298

Query: 266  SFAEYVDMYPKSVTR-------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
             F +YV MY              +E+V +RW++ + LSE  FQQVSFVN IAT KGG HV
Sbjct: 299  GFEDYVKMYTNQFQNEGEPLKIAYEQVGDRWQVALALSEKGFQQVSFVNSIATTKGGRHV 358

Query: 319  DYVANQ-VANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            DYVA+Q VA  + ++  K  K A N+K   +KNH+WVFVNALI+NP FDSQTKET+TL+ 
Sbjct: 359  DYVADQMVAKFIDSIKRKLTKTAMNIKPFQIKNHMWVFVNALIENPTFDSQTKETMTLQS 418

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED-VRGISKLEDA 435
             SFGS C LSE+F  K     GI + +++W  FKQ  DL K         ++GI KLEDA
Sbjct: 419  KSFGSTCTLSEKF-SKAAGNVGITDAVMTWVRFKQMDDLNKKCSKTKTSKLKGIPKLEDA 477

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG +NS+QCTLILTEGDSAK LA++GLS+VGRD++GVFPLRGKLLNVR+ +  Q+ +N
Sbjct: 478  NDAGTKNSQQCTLILTEGDSAKTLAVSGLSIVGRDKYGVFPLRGKLLNVRDGNMKQIADN 537

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI  + KILGL+   +Y   ++ K+LRYG +M+M DQ                      
Sbjct: 538  AEINAMIKILGLQYKKKYETDDDFKTLRYGKVMVMADQ---------------------- 575

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGL+INF+H FWPSL++  +F+ EFITPIVKAT K  + +SF+S+P+
Sbjct: 576  ------DQDGSHIKGLVINFVHHFWPSLIQ-RNFVEEFITPIVKAT-KGKEEISFFSIPE 627

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            Y  W+ +   N  ++ IKYYKGLGTSTSKE KEYF ++  H+  F +    D  A+++AF
Sbjct: 628  YSEWRMNTE-NWKTYKIKYYKGLGTSTSKEAKEYFSDMVRHRIRFKYTGADDDNAVDMAF 686

Query: 673  SKKKIEARKKWLLQF--------EPG---NHLDQKE-KYIKYSDFVNKELILFSMADLQR 720
            SKKKI+ RK WL ++        + G    +L  K+ + + + DFVN+EL+LFS  D +R
Sbjct: 687  SKKKIDERKHWLTKWMQEKKARKQQGLAEEYLYNKDTRTVTFKDFVNQELVLFSNCDNER 746

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIP +VDG KPGQRK+LF  FKR   +E KVAQ +G V+E SAYHHGE SL  TI+ +AQ
Sbjct: 747  SIPCLVDGFKPGQRKVLFACFKRADKREVKVAQLAGAVAELSAYHHGEVSLMGTIINLAQ 806

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            D+VGSNNIN+L P GQFGTR QGGKD+ASARYIFT+LSP+TR +FP +DD +L +L E+ 
Sbjct: 807  DYVGSNNINVLLPIGQFGTRLQGGKDSASARYIFTQLSPVTRSVFPANDDNVLRFLYEEN 866

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q+IEP WY PIIP VLVNG+ GIGTGWS+ IPNYNPR++V NV++L+ GE  + + PWY+
Sbjct: 867  QRIEPEWYCPIIPMVLVNGAAGIGTGWSTNIPNYNPRELVKNVKKLIAGEAQKALDPWYK 926

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQNDS 959
             F G I +         Y   G +  +++ T+ I ELPI+ WTQ+Y+E  LES+++  D 
Sbjct: 927  NFRGKIIQIDPSR----YACYGEVAVLDDNTVEITELPIKTWTQEYKEKVLESLMESTDK 982

Query: 960  ---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKK-FKLTTTISTSNMHLFDSKGV 1015
                +  +++Y  DTTV F V LS   +   ++ G L   FKL   I+T+ M LFD+ G 
Sbjct: 983  KTPIVSDYKEYHTDTTVKFVVKLSPGKLAELERSGDLHTVFKLQQVINTTCMVLFDAAGC 1042

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            ++ Y TPE+I +EFF +R E Y +RK+  +  L+ +  +L N+ RFIL  +N EI++ N+
Sbjct: 1043 LRTYTTPEEITQEFFDVRKEKYIQRKEYMVGVLQAQSKRLTNQARFILAKINNEIIMENK 1102

Query: 1076 KRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEESEENPEVVNG--------- 1122
            K+  ++  L +  F P P    K  + ++ +      E +E ++  E  +G         
Sbjct: 1103 KKASIVETLIKMKFDPDPVKKWKEEQKLKELRESGEVELDEEDQVDEEGDGEGTSASFTT 1162

Query: 1123 ----VQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
                 +  DYDYL+ MA+  L+ E+   L+ + +    E+ +L K T + LW +DLD   
Sbjct: 1163 KVLETRLSDYDYLVGMALIKLSEEEKNKLIKESEDKLAEMKELEKKTWQDLWHEDLDNF- 1221

Query: 1179 MQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEM 1238
              L ELDK +A+ + ++         DA  K   K+   +A+    K   A A E +   
Sbjct: 1222 --LVELDKQEAKEKADQ---------DASIKNATKKLAADAKGGRGKKTIA-AAEVLPSK 1269

Query: 1239 DNVTKVVKPKGRAGLKKAPAEKLDDDEEDEV 1269
            D   + ++PK  A L KA  EK+   +++ V
Sbjct: 1270 DG--QRIEPKVDAAL-KAKYEKMSQPKKERV 1297


>gi|406864759|gb|EKD17803.1| DNA topoisomerase 2 [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
          Length = 1725

 Score = 1125 bits (2910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 593/1227 (48%), Positives = 800/1227 (65%), Gaps = 88/1227 (7%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            + YQK +QLEHI+ RPDTYIGS+E+ T+ +W++  ES++M  R I++VPGLYKIFDEILV
Sbjct: 158  DQYQKLTQLEHIIKRPDTYIGSVEQTTETMWVFNSESQSMELRKITFVPGLYKIFDEILV 217

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNKQRDP M ++KVV+D+E   IS+ N G G+P+EIH++EG+Y+PE+IFGHLLT SN
Sbjct: 218  NAADNKQRDPSMKSIKVVVDREKGEISIENDGAGIPIEIHEKEGIYIPEMIFGHLLTGSN 277

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD+  KTTGGRNGYGAKL NIFSTEFI+ET D    K+YKQ +T NM K  +  IS  K
Sbjct: 278  YDDDEAKTTGGRNGYGAKLCNIFSTEFILETQDSNTGKRYKQTWTENMSKMGKAKISSSK 337

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
              D +T+++F PD  KF M +++DD  AL+K+RV D+AG L K VKV LNG  + +  F 
Sbjct: 338  SSD-FTRITFTPDYKKFKMENIDDDFEALVKRRVYDMAGTL-KGVKVTLNGTLIKL-DFK 394

Query: 269  EYVDMYPKSVTRFH-----------------ERVNERWEICVTLSEGQFQQVSFVNGIAT 311
            +Y++MY K++ +                    + + +WE+   +S+G FQQVSFVN IAT
Sbjct: 395  KYIEMYAKAINKERGVEEGAEPPSASVIIEDPKAHAKWEVGFAVSDGSFQQVSFVNSIAT 454

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKN-KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
              GGTHV+Y+A+Q+ + +MAVV KKN K   +K + ++NH+++FVN LI NPAF SQTKE
Sbjct: 455  TSGGTHVNYIADQICDQLMAVVKKKNAKGTALKTNQIRNHIFLFVNCLIVNPAFTSQTKE 514

Query: 371  TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGIS 430
             LT +   FGSKC L+++FLKK+  ++  V+ +L++   K  + L K+DG K   +    
Sbjct: 515  QLTTKSKQFGSKCILTDQFLKKI-GQTEAVQNILNFQQAKADQVLAKSDGNKRSRMSN-P 572

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KL DANLAG R   +CTLILTEGDSAK LA+AG +V+  DR GVFPLRGKLLNVR+AS +
Sbjct: 573  KLVDANLAGTRRGHECTLILTEGDSAKGLAVAGRAVLDPDRIGVFPLRGKLLNVRDASID 632

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            Q+  N+EI NIK+ LGLK    YN+   LRYGHLMIM DQ                    
Sbjct: 633  QISKNAEIQNIKQFLGLKHKQNYNDTTGLRYGHLMIMADQ-------------------- 672

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA-----TNKNGKVL 605
                    DHDGSHIKGLLINF+   +PSLLK+P F  EFITPIVK        K     
Sbjct: 673  --------DHDGSHIKGLLINFLQVQFPSLLKLPDFFREFITPIVKVYKGPNPKKPISQK 724

Query: 606  SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG 665
            SF++MP YE WK+    N   W+ KYYKGLGTS  ++ + YF N+  H ++F      + 
Sbjct: 725  SFFTMPQYEEWKDQ-HANEKGWTHKYYKGLGTSLPEDAQVYFSNLDNHLREFEVMTQAEE 783

Query: 666  EAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSM 725
            E I+LAFSKKK +ARK WL  F PG  LD   K + Y +F+NKELILFSMAD  RSIPS+
Sbjct: 784  ELIDLAFSKKKADARKTWLGNFLPGTFLDHSTKTLTYDNFINKELILFSMADNIRSIPSV 843

Query: 726  VDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGS 785
            +DG KPGQRK++F  FKRN +K+ KV + +GYVSE++AYHHGE S+  TI+G+AQ+F GS
Sbjct: 844  IDGFKPGQRKVMFACFKRNLVKDMKVVELAGYVSENTAYHHGEASMHMTIVGLAQNFTGS 903

Query: 786  NNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEP 845
            NNIN L+P+G FG+R  GG D+AS RYIFTRLSP  R +F   D+ + +Y  +DG+ IEP
Sbjct: 904  NNINCLEPSGNFGSRLAGGSDSASPRYIFTRLSPFARRVFSALDEPIYEYNVDDGKSIEP 963

Query: 846  TWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL------NGE--MMEPMHP 897
            T Y P++P VL+NG++GIGTGWS+ IPNY+P DIV N++R +      +GE    + M P
Sbjct: 964  TMYCPVVPMVLINGADGIGTGWSTTIPNYHPLDIVKNLKRRMGRLDEGDGEEKPFQTMVP 1023

Query: 898  WYRGFGGTIEKTASKEAGVT-YTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII-- 954
            W+RG+ GT E     EAG   Y   G+I+E+    + I ELPIR WT DY+  LE II  
Sbjct: 1024 WFRGWKGTPE-----EAGPNRYNFDGVIKEMGNNEVEITELPIRMWTDDYKAKLEEIIKG 1078

Query: 955  DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
            ++  SF++ +++Y+D  +V F V L E+ M     +GLL +FKL  T++TSN+  FD +G
Sbjct: 1079 EKVPSFVKDYKEYNDHKSVHFVVQLDEKHMKSALTDGLLDRFKLKKTVATSNLVAFDPRG 1138

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             IKKY+  E+ILEEF+  R   Y KRK   L  +  E  KL N+ RF+L +++ ++VV+ 
Sbjct: 1139 QIKKYENVEEILEEFYVYRFAMYTKRKAYWLAKINTEYRKLRNQARFVLEIIDNQLVVSK 1198

Query: 1075 RKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSM 1134
            +K+  L+ ELR++G+  FPK +   +A  +G TD+  E++E     +   + D+DYLL +
Sbjct: 1199 QKKPVLVAELRKRGYDAFPKLN---DAKKSGETDDVVENDEEVSADDDAGARDFDYLLGL 1255

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDELDKSDAR 1190
             I +LT E+V+ L A       E D + K T + LW +DLD      ++QL E       
Sbjct: 1256 PIWSLTQERVEKLKAQMAAKKVEHDTMEKLTEKDLWCEDLDKFVNEWEVQLAE------- 1308

Query: 1191 AEEERMKIKGNGNGDAGPKIVAKRAPK 1217
             E +  K   N N  A  KI A +  K
Sbjct: 1309 -EADYQKTIRNTNRRASRKIGAGKTSK 1334


>gi|71417991|ref|XP_810722.1| DNA topoisomerase II [Trypanosoma cruzi strain CL Brener]
 gi|70875297|gb|EAN88871.1| DNA topoisomerase II, putative [Trypanosoma cruzi]
          Length = 1484

 Score = 1125 bits (2909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 575/1210 (47%), Positives = 792/1210 (65%), Gaps = 82/1210 (6%)

Query: 24   NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
            N+T+EE+YQKK+Q EHIL RPD YIG+IE  T+ +W+Y+E    M  R  ++ PGLYKIF
Sbjct: 3    NRTVEEIYQKKTQHEHILSRPDMYIGTIEPVTEDMWLYDEAENIMKLRKCTWTPGLYKIF 62

Query: 84   DEILVNAADNKQRDP-KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
            DEILVNAADNK RDP    A+KV ID E  ++ V+N+G+G+PV+ H+E  ++VPE+IFG+
Sbjct: 63   DEILVNAADNKVRDPLGQTAIKVWIDAERGMVRVYNNGEGIPVQRHREHNLWVPEMIFGY 122

Query: 143  LLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP 202
            LLTSSNYDD   K TGGRNG+GAKLTN+FST F +ET   +  KK+   + NNM +  EP
Sbjct: 123  LLTSSNYDDTEAKVTGGRNGFGAKLTNVFSTRFEVETVHSRSRKKFFMRWRNNMLESEEP 182

Query: 203  NISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
             I+   EG ++T V+F PD AKFN+    +D+V +M++RV D+AGC  KS++  LN  ++
Sbjct: 183  VITPS-EGPDYTVVTFYPDFAKFNLQGFGEDMVHMMRRRVYDVAGCTDKSLRCYLNDTKI 241

Query: 263  PVKSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
               SF EYVD+YP    +     + RVN RWE+CV +S   FQQVSFVN IAT +GGTHV
Sbjct: 242  ACSSFLEYVDLYPMMGEERKAASYARVNGRWEVCVRVSNIGFQQVSFVNSIATTRGGTHV 301

Query: 319  DYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
             Y+ +QV   V     +K+K   VK H ++ HL+VF+N L++NP FDSQTKETL   ++ 
Sbjct: 302  RYITDQVIAKVTEQAKRKSKT-EVKPHMIRPHLFVFINCLVENPGFDSQTKETLNTPKNR 360

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANL 437
            FGS C+L    +  +  KS IVE  +  AN K ++++  K      + + GI KL+DAN 
Sbjct: 361  FGSTCDLPPSMIDCIL-KSSIVERAVEMANSKLTREIASKLRNADRKQILGIPKLDDANE 419

Query: 438  AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
            AGG+ S +CTLILTEGDSAKAL  AGL+V  RD FGVFPLRGK LNVR+A+  +V+  +E
Sbjct: 420  AGGKYSHRCTLILTEGDSAKALCTAGLAVKDRDYFGVFPLRGKPLNVRDATLKKVMACAE 479

Query: 498  IGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLA 557
               + KI+GL    +Y+ V+ LRYGHLMIM+DQ                           
Sbjct: 480  FQAVSKIMGLDIRQKYSGVERLRYGHLMIMSDQ--------------------------- 512

Query: 558  QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK-----NGKVLSFYSMPD 612
             DHDGSHIKGL+IN IH +WP L+K P FL +FITPIVKA  K     + + +SF+SMPD
Sbjct: 513  -DHDGSHIKGLIINMIHHYWPDLIKTPGFLQQFITPIVKARKKGRSDGDDRAISFFSMPD 571

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            Y  WK ++G    ++ I+YYKGLGTS +KEG+EYF+NI  H+ DFV ED  D   I +AF
Sbjct: 572  YFEWKNAIGDGIRNYEIRYYKGLGTSGAKEGREYFENIDRHRLDFVHEDATDDARIVMAF 631

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDG 728
            +K K+E RK W+ QF+   ++++   Y    ++YS+FV+KELILFS+AD +RSIPS++DG
Sbjct: 632  AKDKVEERKHWITQFKANTNVNESMNYNVRTVRYSEFVDKELILFSVADCERSIPSVIDG 691

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKPGQRKI+F SFKR   +  KV Q +GYVSEH+AYHHGEQSL  TI+G+AQ+FVGSNN+
Sbjct: 692  LKPGQRKIIFSSFKRRLTRSIKVVQLAGYVSEHAAYHHGEQSLVQTIVGLAQNFVGSNNV 751

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
             LLQ +GQFGTR QGGKD A+ RYIFTRL+ I R+++   DD ++DY ++DG  +EP +Y
Sbjct: 752  PLLQQDGQFGTRLQGGKDHAAGRYIFTRLTNIARYIYHPSDDFVVDYKDDDGLSVEPFYY 811

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            +P+IP VLVNG+ GIGTG+++ IPNY+P +++ N+ RLL GE ++PM PWY GF GTIE+
Sbjct: 812  VPVIPMVLVNGTSGIGTGFATNIPNYSPLEVIDNLMRLLRGEEVQPMKPWYFGFAGTIEE 871

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYS 968
               KE G  +  TG      +  ++I ELPI  WTQ Y++FLE +  +    +  +R+++
Sbjct: 872  ---KEKG-KFVSTGCANVRPDGVVQITELPIGTWTQGYKKFLEEL--REKEVVVQYREHN 925

Query: 969  DDTTVDFEVFLSEESMMRTKQEGLL-KKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILE 1027
             D TVDFEVFL  E +     +G + ++ +L   I  +N+  FD +G I KY   E +L+
Sbjct: 926  TDVTVDFEVFLHPEVLHHWVAQGCVEERLQLREYIHATNIIAFDREGQITKYRDAEAVLK 985

Query: 1028 EFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK 1087
            EF+ +RLE+Y KR+   + +L     KLEN VRF+  VV+G ++V  R++ +LL ELRQ+
Sbjct: 986  EFYLVRLEYYAKRRDFLIGDLRSVASKLENMVRFVTEVVDGRLIVTRRRKKELLEELRQR 1045

Query: 1088 GFTPFP-KNSKSIEAVVA------GATDET--------------------EESEENPEVV 1120
            G+ PFP +  K + +         GA D T                    E+++E PE+ 
Sbjct: 1046 GYAPFPLQQKKKVSSTTIQQGEEEGAADATHATAEDVFLVLQPAVDEGGDEDNQETPEMR 1105

Query: 1121 NGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQ 1180
               +  DYDYLL M +  LT E +  L +   K  +E+  L K TP+ LW +DL+ L  +
Sbjct: 1106 RAAR--DYDYLLGMRLWNLTAEMIARLQSQLQKARDELAALEKRTPKDLWAEDLNQLRPR 1163

Query: 1181 LDELDKSDAR 1190
            ++ L +  A+
Sbjct: 1164 IENLFEERAK 1173


>gi|38453797|dbj|BAD02199.1| DNA topoisomerase II [Arthroderma racemosum]
          Length = 1089

 Score = 1124 bits (2908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/1128 (51%), Positives = 778/1128 (68%), Gaps = 60/1128 (5%)

Query: 33   KKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAAD 92
            K +QLEHIL RPDTYIGS+E+    +W+Y   ++ M +R +S+VPGLYKIFDEILVNAAD
Sbjct: 1    KITQLEHILKRPDTYIGSVERTEMHMWVYNSTTELMEYRDVSFVPGLYKIFDEILVNAAD 60

Query: 93   NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDN 152
            NKQ DP M+ ++V +D+E   ISV N+G G+PVEIH +E +Y+PELIFGHLLTSSNY+D 
Sbjct: 61   NKQNDPNMNEIRVTLDKEAGEISVWNNGRGIPVEIHSKEKIYIPELIFGHLLTSSNYNDL 120

Query: 153  VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             +K TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM    +  I+ CK GD+
Sbjct: 121  QEKVTGGRNGYGAKLCNIFSNEFTVETADSKKNKKFKLTWTNNMSTMGKAKITDCK-GDD 179

Query: 213  WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            +TKV+FKPD AKF M  ++DD  AL+K+RV D+AG  G +VK  LNG ++P+K+F +Y++
Sbjct: 180  YTKVTFKPDFAKFGMDGMDDDFEALVKRRVYDMAGTCGTAVK--LNGTKIPIKTFKKYME 237

Query: 273  MYPKSVTR-------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
            MY K++                 E  + RWEI  T+S+G FQQVSFVN IAT  GGTHV+
Sbjct: 238  MYTKAIKTERGEDPTSDKNDIITESPDRRWEIGFTVSDGSFQQVSFVNSIATTSGGTHVN 297

Query: 320  YVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            Y+++Q+ N +   + KKNK  A +KA  +KNH+++FVNA I NPAF SQTKE LT R S 
Sbjct: 298  YISDQICNKLADALKKKNKTGATLKAAQIKNHIFLFVNAQIVNPAFTSQTKEQLTTRSSQ 357

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLA 438
            FGSKC +S++F+KKV  K+ ++E +L +A  K  + LKK DG +   +    KL DAN A
Sbjct: 358  FGSKCVVSDDFMKKV-MKTRVMEDILHFAEKKADQILKKTDGNRRSRMNN-PKLTDANKA 415

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            G +    CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  NSEI
Sbjct: 416  GTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASVDQISKNSEI 475

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
             NIK  +GL+   EY + + LRYGHLMIMTDQ                            
Sbjct: 476  QNIKNFIGLQHKKEYTDTRGLRYGHLMIMTDQ---------------------------- 507

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYSMPDYE 614
            DHDGSHIKGLLIN++   +P+LLKIP FL+EFITPIVK    + K      SF+++P+YE
Sbjct: 508  DHDGSHIKGLLINYLQVAFPTLLKIPGFLIEFITPIVKVWKGDPKNPTHSKSFFTLPEYE 567

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
             WKE+   N   W  KYYKGLGTS++++ + YFQ++  H K F    D++ E IELAFSK
Sbjct: 568  EWKEA-HTNDKKWQKKYYKGLGTSSTEDAQIYFQDLDRHLKQFHTLQDKEAELIELAFSK 626

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            KK + RK+WL QF+PG +LD     I Y+DF+NKELILFSMAD  RSIPS+VDGLKPGQR
Sbjct: 627  KKADERKEWLRQFKPGTYLDHSTDQITYTDFINKELILFSMADNIRSIPSVVDGLKPGQR 686

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+L+  FKRN  K+ KV + +GYVS  +AY HG+ SL +TI+G+AQ FVGSNNIN L+P+
Sbjct: 687  KVLYTMFKRNVRKDIKVVELAGYVSGMTAYQHGDNSLHATIVGLAQTFVGSNNINCLEPS 746

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            G FG+R QGG D+ASARYI+TRLSP  R LF + D+ LL    +DG+ IEP  Y+P++P 
Sbjct: 747  GNFGSRLQGGSDSASARYIYTRLSPFARRLFHQADEPLLVNNIDDGKVIEPETYVPVVPL 806

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            VL+NG++GIGTGWS+ IPNYNP ++V N++RL+ G+ + PM PW+RGF G  E T S   
Sbjct: 807  VLINGADGIGTGWSTSIPNYNPEEVVDNLKRLMAGDELVPMKPWFRGFKG--EVTGS--- 861

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTT 972
            G  Y  +GII++  +  + I ELPIR WTQD+++ LE II  ++  SFI+ +R Y+  T 
Sbjct: 862  GDRYKFSGIIKQTGDNEVEITELPIRTWTQDFKDKLEDIIKAEKVPSFIKDYRDYNTHTN 921

Query: 973  VDFEVFLS-EESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFH 1031
            V F +    + ++ +  ++GL ++FKL   I+TSNM  FD++G I +Y+TPE IL  F+ 
Sbjct: 922  VHFIIQSGVKNTVKKAVEDGLEERFKLVKPIATSNMVAFDAEGRITRYETPEDILRAFYA 981

Query: 1032 IRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTP 1091
            +R++ YEKRK+  L  L+ +L KL N+ RF+  +++G++V++ +K+  L+ EL++K F P
Sbjct: 982  VRIKLYEKRKQHLLSQLQSQLEKLTNQARFVQMIIDGKLVISKKKKAVLIQELQEKAFKP 1041

Query: 1092 FPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            FPK + +  A  A    E +E EE   V   + S  YDYLL M + +L
Sbjct: 1042 FPKVTDAAAAGEAEDVVEEDEDEEEETVDAALASDAYDYLLGMPLWSL 1089


>gi|317158221|ref|XP_001826919.2| DNA topoisomerase 2 [Aspergillus oryzae RIB40]
          Length = 1700

 Score = 1124 bits (2907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 594/1188 (50%), Positives = 784/1188 (65%), Gaps = 100/1188 (8%)

Query: 12   SNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR 71
            +N A+  GP   N  + E YQK +QLEHI+ RPDTYIGSIE+ +Q +W+Y  ES  M  R
Sbjct: 112  TNEADA-GPKDSN--VSEKYQKLTQLEHIIKRPDTYIGSIERTSQQMWVYSTESDGMEFR 168

Query: 72   TISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEE 131
             +SYVPGLYKIFDEI+VNAADNKQ D  MD ++V I +E   ISV N+G G+P+E+H +E
Sbjct: 169  EVSYVPGLYKIFDEIVVNAADNKQNDANMDEIRVTISRETGEISVWNNGRGIPIEMHAKE 228

Query: 132  GVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQV 191
             +YVPELIFGHLLTSSNYDD  +K TGGRNG+GAKL N+FSTEF IET D ++ KKYKQ 
Sbjct: 229  KIYVPELIFGHLLTSSNYDDTQQKVTGGRNGFGAKLCNVFSTEFSIETQDSRQKKKYKQT 288

Query: 192  FTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGK 251
            +T+NM K  +  I+  K GD++TKV+FKPD AKF M  +++D  AL+K+RV DLAG    
Sbjct: 289  WTSNMTKMGKAKITDAK-GDDYTKVTFKPDYAKFGMDGMDNDFEALVKRRVYDLAGTA-- 345

Query: 252  SVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE---------------RWEICVTLS 296
             V V+LNG RVPV++F +Y++MY K++ R  ER ++               RWE+   +S
Sbjct: 346  KVAVKLNGSRVPVRNFKKYMEMYTKAIRR--ERGDDGPAAKDEIITCSPDPRWEVGFAVS 403

Query: 297  EGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFV 355
            +G FQQVSFVN IAT  GGTHV+Y+A+Q+ + +   V KKNKN A +K   ++NH+++FV
Sbjct: 404  DGSFQQVSFVNSIATTSGGTHVNYIADQICSKLADQVKKKNKNGATLKPAQIRNHIFIFV 463

Query: 356  NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
            NA I NPAF SQTKE LT + S FGSKC L E+F KK+  K+ ++  +L +A  K  + L
Sbjct: 464  NAQIVNPAFTSQTKEQLTTKSSQFGSKCVLEEDFYKKIL-KTDVMSNILHFAQQKADQML 522

Query: 416  KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVF 475
            KK DG +   +    KL DAN AG ++   CTLILTEGDSAK LAMAG +VVG D FGVF
Sbjct: 523  KKTDGGRRARMNN-PKLTDANKAGTKDGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVF 581

Query: 476  PLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAP 535
            PLRGKLLNVR+A+  Q+  N+EI NIK  LGL+   EY + + LRYGHLMIMTDQ     
Sbjct: 582  PLRGKLLNVRDATFEQISKNAEIQNIKNFLGLQHKKEYTDTRGLRYGHLMIMTDQ----- 636

Query: 536  LSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIV 595
                                   DHDGSHIKGLLINF+ + +PSLL+IP FL+EFITPI+
Sbjct: 637  -----------------------DHDGSHIKGLLINFLQAQFPSLLRIPEFLIEFITPII 673

Query: 596  KATNKN----GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 651
            K    +     K  SF++MP+YEAWKE    +   W  KYYKGLGTST+++ + YF+++ 
Sbjct: 674  KVWKGDPKNPTKQRSFFTMPEYEAWKEE-HKHERGWEHKYYKGLGTSTTEDAQVYFRDLD 732

Query: 652  LHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELI 711
             H K+F    D +   IELAFSKKK + RK+WL QF+PG  LD     I Y+DF+NKELI
Sbjct: 733  RHLKEFHTMQDNEVGLIELAFSKKKADERKEWLRQFKPGTFLDHSVSKISYTDFINKELI 792

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            LFSMAD  RSIPS+VDGLKPGQRK+L+  F+RN  K+ KV + +G+VS  +AY HG+ SL
Sbjct: 793  LFSMADNVRSIPSVVDGLKPGQRKVLYTCFRRNLKKDMKVVELAGHVSGMTAYQHGDISL 852

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
              TI+G+AQ F                    GG D ASARYI+TRLSP  R +F   DD 
Sbjct: 853  QQTIVGLAQSF--------------------GGSDCASARYIYTRLSPFARRVFHAHDDP 892

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            LL Y  +DG++IEP  Y+P++P +LVNG++GIGTGWSS IPNYNP DIV N++RL++GE 
Sbjct: 893  LLTYNEDDGEKIEPEIYVPVVPMILVNGADGIGTGWSSSIPNYNPEDIVDNLKRLMDGEE 952

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLE 951
              PM PW+RGF G +        G  +  +GII+E  E  + I ELPIR WTQD+++ LE
Sbjct: 953  TRPMQPWFRGFTGEVTDV----GGDRFKFSGIIKETGEKEVEITELPIRTWTQDFKDKLE 1008

Query: 952  SII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHL 1009
             II  ++  SFI+ ++ Y+  T          ++M     EGL +KFKL+ T++T+N+  
Sbjct: 1009 DIIKAEKTPSFIKDYKDYNTHT----------KNMKSALSEGLEEKFKLSKTVATTNLVA 1058

Query: 1010 FDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGE 1069
            FD +G I KY T + IL+EF+  RL+FYEKRK+ QL  L+ EL KL N+ RF+  +++G+
Sbjct: 1059 FDPEGRITKYATVDDILKEFYTYRLKFYEKRKQYQLSQLQKELDKLSNQARFVQEIIDGK 1118

Query: 1070 IVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNG--VQSID 1127
            +VV+ +K+  L+ EL+ KG+  FPK +   EAV AG  +   E +++        V S  
Sbjct: 1119 LVVSKKKKNVLVQELKDKGYKAFPKVA---EAVKAGEEERVVEEDDDESDSQDTEVLSSA 1175

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            YDYLL MAI +LT E+V+ L     +   EVD L K + E +W +DLD
Sbjct: 1176 YDYLLGMAIWSLTQERVEKLRRQIGEKEVEVDALIKMSKEDIWKRDLD 1223


>gi|71424000|ref|XP_812644.1| DNA topoisomerase II [Trypanosoma cruzi strain CL Brener]
 gi|70877452|gb|EAN90793.1| DNA topoisomerase II, putative [Trypanosoma cruzi]
          Length = 1476

 Score = 1124 bits (2907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1204 (47%), Positives = 789/1204 (65%), Gaps = 82/1204 (6%)

Query: 24   NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
            N+T+EE+YQKK+Q EHIL RPD YIG+IE  T+ +W+Y+E    M  R  ++ PGLYKIF
Sbjct: 3    NRTVEEIYQKKTQHEHILSRPDMYIGTIEPVTEDMWLYDEAENIMKLRKCTWTPGLYKIF 62

Query: 84   DEILVNAADNKQRDP-KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
            DEILVNAADNK RDP    A+KV ID E  ++ V+N+G+G+PV+ H+E  ++VPE+IFG+
Sbjct: 63   DEILVNAADNKVRDPLGQTAIKVWIDAERGMVRVYNNGEGIPVQRHREHNLWVPEMIFGY 122

Query: 143  LLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP 202
            LLTSSNYDD   K TGGRNG+GAKLTN+FST F +ET   +  KK+   + NNM +  EP
Sbjct: 123  LLTSSNYDDTEAKVTGGRNGFGAKLTNVFSTRFEVETVHSRSRKKFFMRWRNNMLESEEP 182

Query: 203  NISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
             I+   EG ++T V+F PD AKFN+    +D+V +M++RV D+AGC  KS++  LN  ++
Sbjct: 183  VITPS-EGPDYTVVTFYPDFAKFNLQGFGEDMVHMMRRRVYDVAGCTDKSLRCYLNDTKI 241

Query: 263  PVKSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
               SF EYVD+YP    +     + RVN RWE+CV +S   FQQVSFVN IAT +GGTHV
Sbjct: 242  ACSSFLEYVDLYPMMGEERKAASYARVNGRWEVCVRVSNIGFQQVSFVNSIATTRGGTHV 301

Query: 319  DYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
             Y+ +QV   V     +K+K   VK H ++ HL+VF+N L++NP FDSQTKETL   ++ 
Sbjct: 302  RYITDQVIAKVTEQAKRKSKT-EVKPHMIRPHLFVFINCLVENPGFDSQTKETLNTPKNR 360

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANL 437
            FGS C+L    +  +  KS IVE  +  AN K ++++  K      + + GI KL+DAN 
Sbjct: 361  FGSTCDLPPSMIDCIL-KSSIVERAVEMANSKLTREIASKLRNADRKQILGIPKLDDANE 419

Query: 438  AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
            AGG+ S +CTLILTEGDSAKAL  AGL+V  RD FGVFPLRGK LNVR+A+  +V+  +E
Sbjct: 420  AGGKYSHRCTLILTEGDSAKALCTAGLAVKDRDYFGVFPLRGKPLNVRDATLKKVMACAE 479

Query: 498  IGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLA 557
               + KI+GL    +Y+ V+ LRYGHLMIM+DQ                           
Sbjct: 480  FQAVSKIMGLDIRQKYSGVERLRYGHLMIMSDQ--------------------------- 512

Query: 558  QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK-----NGKVLSFYSMPD 612
             DHDGSHIKGL+IN IH +WP L+K P FL +FITPIVKA  K     + + +SF+SMPD
Sbjct: 513  -DHDGSHIKGLIINMIHHYWPDLIKTPGFLQQFITPIVKARKKGRSDGDDRAISFFSMPD 571

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            Y  WK ++G    ++ I+YYKGLGTS +KEG+EYF+NI  H+ DFV ED  D   I +AF
Sbjct: 572  YFEWKNAIGDGIRNYEIRYYKGLGTSGAKEGREYFENIDRHRLDFVHEDATDDARIVMAF 631

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDG 728
            +K K+E RK W+ QF+   ++++   Y    ++YS+FV+KELILFS+AD +RSIPS++DG
Sbjct: 632  AKDKVEERKHWITQFKANTNVNESMNYNVRTVRYSEFVDKELILFSVADCERSIPSVIDG 691

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKPGQRKI+F SFKR   +  KV Q +GYVSEH+AYHHGEQSL  TI+G+AQ+FVGSNN+
Sbjct: 692  LKPGQRKIIFSSFKRRLTRSIKVVQLAGYVSEHAAYHHGEQSLVQTIVGLAQNFVGSNNV 751

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
             LLQ +GQFGTR QGGKD A+ RYIFTRL+ I R+++   DD ++DY ++DG  +EP +Y
Sbjct: 752  PLLQQDGQFGTRLQGGKDHAAGRYIFTRLTNIARYIYHPSDDFVVDYKDDDGLSVEPFYY 811

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            +P+IP VLVNG+ GIGTG+++ IPNY+P +++ N+ RLL GE ++PM PWY GF GTIE+
Sbjct: 812  VPVIPMVLVNGTSGIGTGFATNIPNYSPLEVIDNLMRLLRGEEVQPMKPWYFGFAGTIEE 871

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYS 968
               KE G  +  TG      +  ++I ELPI  WTQ Y++FLE +  +    +  +R+++
Sbjct: 872  ---KEKG-KFVSTGCANVRPDGVVQITELPIGTWTQGYKKFLEEL--REKEVVVQYREHN 925

Query: 969  DDTTVDFEVFLSEESMMRTKQEGLL-KKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILE 1027
             D TVDFEVFL  E +     +G + ++ +L   I  +N+  FD +G I KY   E +L+
Sbjct: 926  TDVTVDFEVFLHPEVLHHWVAQGCVEERLQLREYIHATNIIAFDREGQITKYRDAEAVLK 985

Query: 1028 EFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK 1087
            EF+ +RLE+Y KR+   + +L     KLEN VRF+  VV+G ++V  R++ +LL ELRQ+
Sbjct: 986  EFYLVRLEYYAKRRDFLIGDLRSVASKLENMVRFVTEVVDGRLIVTRRRKKELLEELRQR 1045

Query: 1088 GFTPFP-KNSKSIEAVVA------GATDET--------------------EESEENPEVV 1120
            G+ PFP +  K + +         GA D T                    E+++E PE+ 
Sbjct: 1046 GYAPFPLQQKKKVSSTTIQQGEEEGAADATHATAEDVFLVLQPAVDEGGDEDNQETPEMR 1105

Query: 1121 NGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQ 1180
               +  DYDYLL M +  LT E +  L +   K  +E+  L K TP+ LW +DL+ L  +
Sbjct: 1106 RAAR--DYDYLLGMRLWNLTAEMIARLQSQLQKARDELAALEKRTPKDLWAEDLNQLRPR 1163

Query: 1181 LDEL 1184
            ++ L
Sbjct: 1164 IENL 1167


>gi|441661001|ref|XP_003278314.2| PREDICTED: DNA topoisomerase 2-alpha [Nomascus leucogenys]
          Length = 1499

 Score = 1124 bits (2906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/1212 (49%), Positives = 791/1212 (65%), Gaps = 126/1212 (10%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E+++IS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNIISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEIAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+ + RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQTDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D 
Sbjct: 774  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDN 833

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R+IV N+RRL++GE   PM     
Sbjct: 834  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMXXXXX 893

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
                T                                    WTQ Y+E  LE ++   ++
Sbjct: 894  XXXXT------------------------------------WTQTYKEQVLEPMMNGTEK 917

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 918  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 977

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 978  KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1037

Query: 1077 RTDLLLELRQKGFTPFP-KNSKSIEAVV--------------AGATDETEESEENPEVVN 1121
            + +L+  L Q+G+   P K  K  +  V               G +D   +S        
Sbjct: 1038 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETGKSDSVTDSGPT----- 1092

Query: 1122 GVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL 1181
                  ++YLL M +  LT EK   L   R++  +E+D L++ +P  LW +DL     +L
Sbjct: 1093 ------FNYLLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATFVEEL 1146

Query: 1182 DELDKSDARAEE 1193
            + ++  + + E+
Sbjct: 1147 EAVEAKEKQDEQ 1158


>gi|406603298|emb|CCH45177.1| DNA topoisomerase II [Wickerhamomyces ciferrii]
          Length = 1503

 Score = 1122 bits (2903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1210 (47%), Positives = 806/1210 (66%), Gaps = 78/1210 (6%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T   K + E YQK SQLEHIL RPDTYIGS E     LWIY++++++M+ + +  VPGL+
Sbjct: 16   TPKKKNVSEQYQKLSQLEHILKRPDTYIGSTEHQESNLWIYDDQTESMMEKPVKLVPGLF 75

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADNK RDP M  ++V I+ E +LI + N G G+P+E+H++EG+Y+PELIF
Sbjct: 76   KIFDEILVNAADNKIRDPSMKKIEVTINPEENLIEIKNDGRGIPIEMHEKEGIYIPELIF 135

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            G+LLTSSNYDD+ KK  GGRNGYGAKL NIFSTEF +ETAD   +K Y Q + NNM K +
Sbjct: 136  GNLLTSSNYDDDEKKVVGGRNGYGAKLCNIFSTEFTVETADKNTMKIYTQTWNNNMTKTN 195

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
            +P I   K+   +TK+SFKPDLAKFNM  L++D + ++++RV D+AG L + V V LNG 
Sbjct: 196  KPKIKTVKKPQEYTKISFKPDLAKFNMEILDNDTLGVLRRRVYDIAGTL-RDVNVSLNGT 254

Query: 261  RVPVKSFAEYVDMYPKSV-------------------TRFHERVNE-----RWEICVTLS 296
             + ++SF +YV+MY K++                   T  ++++ +     RWEI   +S
Sbjct: 255  TLKIRSFKQYVEMYIKALEAKKALENGEPSSEDSKKPTIVYKKIEDPKSKGRWEIAFGVS 314

Query: 297  EGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVN 356
            +  F QVSFVN IAT  GGTHV+Y+A+Q+ + +  V+ K++KN+ VK   ++N++++FVN
Sbjct: 315  DSAFNQVSFVNSIATTSGGTHVNYIADQIVDKIGDVLKKRHKNSTVKPFQIRNNMFLFVN 374

Query: 357  ALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK 416
             LI+NPAF SQTKE ++ R+  FGS+ ++ ++F+ +V  K+  +  +L  A     K L+
Sbjct: 375  CLIENPAFTSQTKEQMSTRRQQFGSEIKVPDDFINQV-LKTEFISNILDAAQANADKALR 433

Query: 417  KNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFP 476
            K DG+K   +   SKLEDAN AG R   +CTLILTEGDSA +LA+AGL+VVGRD FG FP
Sbjct: 434  KTDGSKKSRITNYSKLEDANKAGTREGYKCTLILTEGDSALSLAVAGLAVVGRDYFGCFP 493

Query: 477  LRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPL 536
            LRGK+LNVR+AS++Q+  N+EI  IK+I+GL+   +Y ++KSLRYG +MIMTD       
Sbjct: 494  LRGKMLNVRDASNDQITKNAEIQAIKQIMGLQHKKKYEDLKSLRYGRIMIMTD------- 546

Query: 537  SFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK 596
                                 QD DGSHIKGL+INF+ + +P LL IP FL+EFITPIVK
Sbjct: 547  ---------------------QDTDGSHIKGLIINFLETSFPGLLNIPGFLLEFITPIVK 585

Query: 597  A--TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHK 654
               T    + L+FY+MP+YE+W E+   +  +W+ KYYKGLGTS+ +EG+EYF ++  H 
Sbjct: 586  VNITKPRRETLAFYNMPEYESWIEN-ESHQYTWTHKYYKGLGTSSQEEGREYFSDLEKHL 644

Query: 655  KDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFS 714
            K F   ++ D   I+LAFSKKK + RK+WL  F PG HLD     I  S+F+NKELILFS
Sbjct: 645  KTFNPLEENDKGLIDLAFSKKKADHRKEWLRGFVPGTHLDIDLNEIPISEFINKELILFS 704

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
            MAD  RSIPS++DG KPGQRKIL+ SFKRN   E KVAQ +GY+SEH+ YHHGEQSL +T
Sbjct: 705  MADNIRSIPSVLDGFKPGQRKILYGSFKRNLKSEIKVAQLAGYISEHTGYHHGEQSLITT 764

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+G+AQDFVGSNNINLL P G FGTRN GGKDA++ARYI+T L+ ITR +F + DD L  
Sbjct: 765  IVGLAQDFVGSNNINLLLPKGSFGTRNMGGKDASAARYIYTELATITRKIFNQTDDALYT 824

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            Y  +DG+ +EPTWY+PIIP VLVNG+EGIGTGWS+ +P +NP D+V N++RL+N + +  
Sbjct: 825  YEQDDGENVEPTWYLPIIPMVLVNGAEGIGTGWSTNVPQFNPADLVENMKRLMNNQELLE 884

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII 954
            M PWY+G+ G I+K    +    Y V G IE++++ TL I ELP++ WT   +E L   +
Sbjct: 885  MEPWYKGWDGQIQKIGPDK----YKVYGKIEKLDDNTLAITELPVKTWTASVKEQLLLGL 940

Query: 955  DQNDS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFD 1011
              +D    +I+   Q      + F V LS+  M ++++ GL ++FKL + I+ SNM LFD
Sbjct: 941  GGSDKVKPWIKDM-QEQHGLGIRFIVTLSDAEMKKSEEIGLYERFKLHSVINLSNMVLFD 999

Query: 1012 SKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIV 1071
             +G IKKY+T ++IL++F+++RL++Y++RK    + L   L KL ++ RFI  +++ ++ 
Sbjct: 1000 PQGRIKKYETVDEILKDFYYVRLDYYQRRKDNLAKELSNHLEKLSSQARFIKLIIDKKLN 1059

Query: 1072 VNNRKRTDLLLELRQKGFTPFPKNSKSI-----------EAVVAGATDETEESEENPEVV 1120
            +NNRKR DL+  L++  F  F K    I           + +VA    E +  + +   V
Sbjct: 1060 INNRKRVDLIENLQELNFPKFDKKGNPIFIKKDPEDITQDQIVADEDAEDDGLDADASTV 1119

Query: 1121 NGVQSI--DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
            +  +++   YDYLL + I +LT E+ + LL  +    +E+ +L K T + LW +DLD   
Sbjct: 1120 HIRENVFSSYDYLLGLPIWSLTRERYEKLLQQKANKEDELTELLKLTSKDLWNRDLDDFM 1179

Query: 1179 MQLDELDKSD 1188
            +   +  K D
Sbjct: 1180 ISWKQFLKDD 1189


>gi|407419934|gb|EKF38372.1| DNA topoisomerase II, putative [Trypanosoma cruzi marinkellei]
          Length = 1488

 Score = 1122 bits (2902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/1222 (47%), Positives = 798/1222 (65%), Gaps = 85/1222 (6%)

Query: 24   NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
            N+T+EE+YQKK+Q EHIL RPD YIG+IE  T+ +W+Y+E    M  R  ++ PGLYKIF
Sbjct: 3    NRTVEEIYQKKTQHEHILSRPDMYIGTIEPVTEDMWLYDEAENIMKLRKCTWTPGLYKIF 62

Query: 84   DEILVNAADNKQRDP-KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
            DEILVNAADNK RDP    A+KV ID E  ++ V+N+G+G+PV+ H+E  ++VPE+IFG+
Sbjct: 63   DEILVNAADNKVRDPLGQTAIKVWIDAERGMVRVYNNGEGIPVQRHREHNLWVPEMIFGY 122

Query: 143  LLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP 202
            LLTSSNYDD   K TGGRNG+GAKLTN+FS  F +ET   +  KK+   + NNM +  EP
Sbjct: 123  LLTSSNYDDTEAKVTGGRNGFGAKLTNVFSKRFEVETVHSRSRKKFFMRWRNNMLESEEP 182

Query: 203  NISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
             I+   EG ++T V+F PD AKFN+    +D+V +M++RV D+AGC  KS++  LN  ++
Sbjct: 183  VITPS-EGPDYTVVTFYPDFAKFNLQGFGEDMVHMMRRRVYDVAGCTDKSLRCYLNDTKI 241

Query: 263  PVKSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
               SF EYVD+YP    +     + RVN+RWE+CV +S   FQQVSFVN IAT +GGTHV
Sbjct: 242  ACSSFLEYVDLYPMMGEERKAASYARVNDRWEVCVRVSNIGFQQVSFVNSIATTRGGTHV 301

Query: 319  DYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
             Y+ +QV   V     +K+K   VK H ++ HL+VF+N L++NP FDSQTKETL   ++ 
Sbjct: 302  RYITDQVIAKVTEQAKRKSKT-EVKPHMIRPHLFVFINCLVENPGFDSQTKETLNTPKNR 360

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANL 437
            FGS C+L    +  +  KS IVE  +  AN K ++++  K      + + GI KL+DAN 
Sbjct: 361  FGSTCDLPPSMIDCIL-KSSIVERAVEMANSKLTREIASKLRNADRKQILGIPKLDDANE 419

Query: 438  AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
            AGG+ S +CTLILTEGDSAKAL  AGL+V  RD FGVFPLRGK LNVR+A+  +V+  +E
Sbjct: 420  AGGKYSHRCTLILTEGDSAKALCTAGLAVKDRDYFGVFPLRGKPLNVRDATLKKVMACAE 479

Query: 498  IGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLA 557
               + KI+GL    +Y++V+ LRYGHLMIM+DQ                           
Sbjct: 480  FQAVSKIMGLDIRQKYSSVERLRYGHLMIMSDQ--------------------------- 512

Query: 558  QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK-----NGKVLSFYSMPD 612
             DHDGSHIKGL+IN IH +WP L+K P FL +FITPIVKA  K     + + +SF+SMPD
Sbjct: 513  -DHDGSHIKGLIINMIHHYWPDLIKTPGFLQQFITPIVKARKKGRSDGDDRAISFFSMPD 571

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            Y  WK ++G    ++ I+YYKGLGTS +KEG+EYF+NI  H+ DFV ED  D   I +AF
Sbjct: 572  YFEWKNAIGDGIRNYEIRYYKGLGTSGAKEGREYFENIDRHRLDFVHEDATDDARIVMAF 631

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDG 728
            +K K+E RK W+ QF+   ++++   Y    ++YS+FV+KELILFS+AD +RSIPS++DG
Sbjct: 632  AKDKVEERKHWITQFKANTNVNESMNYNVRTVRYSEFVDKELILFSVADCERSIPSVIDG 691

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKPGQRKI+F SFKR   +  KV Q +GYVSEH+AYHHGEQSL  TI+G+AQ+FVGSNN+
Sbjct: 692  LKPGQRKIIFSSFKRRLTRSIKVVQLAGYVSEHAAYHHGEQSLVQTIVGLAQNFVGSNNV 751

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
             LLQ +GQFGTR QGGKD A+ RYIFTRL+ I R+++   DD ++DY ++DG  +EP +Y
Sbjct: 752  PLLQQDGQFGTRLQGGKDHAAGRYIFTRLTNIARYIYHPSDDFVVDYKDDDGLSVEPFYY 811

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            +P+IP VLVNG+ GIGTG+++ IPNY+P +++ N+ RLL GE ++PM PWY GF GTIE+
Sbjct: 812  VPVIPMVLVNGTSGIGTGFATNIPNYSPIEVIDNLMRLLRGEEVQPMKPWYFGFTGTIEE 871

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYS 968
               KE G  +  TG      +  ++I ELPI  WTQ Y++FLE +  +    +  +R+++
Sbjct: 872  ---KEKG-KFVSTGCATVRPDGVVQITELPIGTWTQAYKKFLEEL--REKEVVVQYREHN 925

Query: 969  DDTTVDFEVFLSEESMMRTKQEGLL-KKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILE 1027
             D TVDFEVFL  E +     +G + ++ +L   I  +N+  FD +G I KY   E +L+
Sbjct: 926  TDVTVDFEVFLHPEVLQHWVAQGCVEERLQLREYIHATNIIAFDREGQITKYRDAEAVLK 985

Query: 1028 EFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK 1087
            EF+ +RLE+Y KR+   + +L     KLEN VRF+  VV+G ++V  R++ +LL ELRQ+
Sbjct: 986  EFYLVRLEYYAKRRDFLIGDLRSVASKLENMVRFVTEVVDGRLIVTRRRKKELLEELRQR 1045

Query: 1088 GFTPFP-KNSKSIEAVVA-------GATDET--------------------EESEENPEV 1119
            G+ PFP +  K + +          GA D T                    E ++E PE+
Sbjct: 1046 GYAPFPLQQKKKVSSTTIQQGEEEEGAADATHATAEDVFLVLQPAVDEEGDEGNQETPEL 1105

Query: 1120 VNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
                +  DYDYLL M +  LT E +  L +   K  +E+  L K TP+ LW +DL+ L  
Sbjct: 1106 RRAAR--DYDYLLGMRLWNLTAEMIARLQSQLQKARDELATLEKRTPKDLWAEDLNQLRP 1163

Query: 1180 QLDEL--DKSDARAEEERMKIK 1199
            +++ L  D++   A  +R K++
Sbjct: 1164 RIENLFEDRAKEIASIQRKKME 1185


>gi|302895481|ref|XP_003046621.1| hypothetical protein NECHADRAFT_33819 [Nectria haematococca mpVI
            77-13-4]
 gi|256727548|gb|EEU40908.1| hypothetical protein NECHADRAFT_33819 [Nectria haematococca mpVI
            77-13-4]
          Length = 1677

 Score = 1122 bits (2901), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 592/1252 (47%), Positives = 810/1252 (64%), Gaps = 84/1252 (6%)

Query: 8    PLTTSNN--ANVVGPTAPN----KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIY 61
            PLT   N   ++  P  P     KT  E YQK +QL+HI+ RPDTYIGS+E   Q +W+Y
Sbjct: 93   PLTEPENDTMDIDTPEKPKTTKPKTATETYQKLTQLQHIIKRPDTYIGSVEMTQQTMWVY 152

Query: 62   EEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGD 121
             +E+  M +R +++VPGLYKIFDEILVNAADNKQRD  M  +K+ ID+   +ISV N+G 
Sbjct: 153  NKETSLMEYRPVTFVPGLYKIFDEILVNAADNKQRDKSMTYMKINIDRATGVISVENNGK 212

Query: 122  GVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 181
            G+P+ IH++E +Y+PEL+FGHLL  SN+DD+ KKT GGRNGYGAKL N+FSTEF +E  D
Sbjct: 213  GIPIVIHEKEKIYIPELVFGHLLAGSNFDDDEKKTVGGRNGYGAKLCNVFSTEFQLECQD 272

Query: 182  GKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKK 240
             +  K+Y+QV+T+NM K  +  I+  K  D + +++FKPD  +F M   ++DD+  L+ +
Sbjct: 273  NEHGKRYRQVWTDNMQKMQKAKITSSKTAD-FVRITFKPDYKRFGMEDGIDDDLERLLYR 331

Query: 241  RVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE------------- 287
            RV D+AG + + VKV LNG  + +K F  Y D+Y KS+ +  ER++E             
Sbjct: 332  RVYDMAGTV-RGVKVHLNGEVLKLKDFKGYCDLYAKSIAK--ERMDEEGGTPTCSVEMDK 388

Query: 288  -----RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANV 342
                 RWE+   +S+G FQQVSFVN IAT  GG+HVDY+ANQV  +++  +NKK K   +
Sbjct: 389  DKGHPRWEVGFAVSDGTFQQVSFVNSIATTSGGSHVDYIANQVTAYLLKALNKKKKGHTL 448

Query: 343  KAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVET 402
            K  ++KNH+++FVN LIDNPAF+SQTKE +T + S FGSKC+L E+FLKKV AKS  ++ 
Sbjct: 449  KQSHLKNHIFIFVNCLIDNPAFNSQTKEHMTTKTSQFGSKCQLGEDFLKKV-AKSEAIQN 507

Query: 403  LLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMA 462
            ++ +A  K  K L K+DG K   V   +KL +ANLAG R   +CTLILTEGDSAK LA++
Sbjct: 508  IMDFAERKADKMLAKSDGNKRSRVSN-AKLVEANLAGTRRGHECTLILTEGDSAKGLAVS 566

Query: 463  GLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYG 522
            G +++  DR GVFPLRGKLLNVR+AS +Q+  N EI NIK+ LGLK    Y + KSLRYG
Sbjct: 567  GRAILDPDRIGVFPLRGKLLNVRDASVDQITKNQEIQNIKQFLGLKHKQVYTDTKSLRYG 626

Query: 523  HLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK 582
            HLMIM DQ                            DHDGSHIKGLLINF+   +PSLLK
Sbjct: 627  HLMIMADQ----------------------------DHDGSHIKGLLINFLQVQFPSLLK 658

Query: 583  IPSFLVEFITPIVKA-----TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGT 637
            +P F  EFITPIVK        K  ++ SF++ P+YE WKE    +   W  KYYKGLGT
Sbjct: 659  VPDFFREFITPIVKVWQGPNPKKPLRLKSFFTQPEYEEWKEDHKDDMGRWHSKYYKGLGT 718

Query: 638  STSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKE 697
            S++++ + YF N+  H K+F     ++ + ++LAFSKKK +ARK+WL  F PG +LD   
Sbjct: 719  SSNEDAQVYFTNLDDHLKEFEVMKPEEADLLDLAFSKKKADARKEWLGNFVPGTYLDHST 778

Query: 698  KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
            K I YSDF+N+ELILFSMAD  RSIPS++DG KPGQRK+L+  FKRN +K+ KV + SGY
Sbjct: 779  KSISYSDFINRELILFSMADNMRSIPSVLDGFKPGQRKVLYACFKRNLVKDKKVVELSGY 838

Query: 758  VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
            VSE +AYHHGE SL  TI+G+AQ+FVGSNNIN L+P+G FG+R  GG DAAS RY FTRL
Sbjct: 839  VSEQTAYHHGEASLQQTIIGLAQNFVGSNNINCLEPSGNFGSRLAGGSDAASPRYTFTRL 898

Query: 818  SPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPR 877
            SP  R +F   D+  L + +EDG++IEP  Y PIIP VLVNG++GIGTGWS+ IPNY+P 
Sbjct: 899  SPFARKIFSPMDEPNLQHQHEDGKKIEPVAYAPIIPMVLVNGADGIGTGWSTSIPNYHPE 958

Query: 878  DIVANVRRLL------NGEMM--EPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIE--EV 927
            DIV N++R +      +GE +  E M PW+RG+ G  E          Y   GI +  E 
Sbjct: 959  DIVRNLKRRMGRLDEKDGEELPFETMMPWFRGWKGQPEAAGPDR----YKFNGIAQQNER 1014

Query: 928  NETTLRIKELPIRRWTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMM 985
            N   + I ELPIR WT D++  LE II  ND  ++I+ +++++D + V FEV + E+   
Sbjct: 1015 NPNEITISELPIRVWTDDFKARLEKIISGNDGPAWIKDYKEFNDHSVVHFEVMMDEKHTE 1074

Query: 986  RTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQL 1045
            +  +EG+L++FKL   ++TSN+  FDS+G I+KY+  E ILEE++H R + Y +RKK  L
Sbjct: 1075 KVLEEGILERFKLLKQVATSNLVAFDSRGQIRKYEKVEDILEEYYHYRFDMYTERKKYWL 1134

Query: 1046 ENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAG 1105
                 +  KL+N+ RFI  +++GE++V  +K+T L+ ELR + +  FP+ S   +     
Sbjct: 1135 GVYHADYRKLKNQARFIKEIIDGELIVGKKKKTVLVQELRDRKYEAFPRGSDKKKTADEE 1194

Query: 1106 ATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKAT 1165
              D  +  + + ++  G +  DYDYLLSM I +LT E+++ L A  +K   E DDL   +
Sbjct: 1195 EDDADDNQDADADMDGGAR--DYDYLLSMPIWSLTAERLEKLKAAIEKKKAEHDDLLALS 1252

Query: 1166 PESLWVKDLDALDMQLDELDKSDA--RAEEERMKIKGNGNGDAGPKIVAKRA 1215
             + LW +DLD    + D     DA  +    RM  + +    AGP    ++A
Sbjct: 1253 EKDLWCRDLDEFSAEWDNQLALDAELKTNIRRMGRRVSKKIGAGPAGRGRKA 1304


>gi|325588262|gb|ADZ31963.1| alpha DNA topoisomerase II [Trypanosoma rangeli]
          Length = 1455

 Score = 1121 bits (2899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1203 (47%), Positives = 784/1203 (65%), Gaps = 82/1203 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            +T+EE+YQKK+Q EHIL RPD YIG+IE  T+ +W+Y+E    M  R  ++ PGLYKIFD
Sbjct: 4    RTVEEIYQKKTQHEHILARPDMYIGTIEPVTEDMWVYDEAENIMKVRKCTWTPGLYKIFD 63

Query: 85   EILVNAADNKQRDP-KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            EILVNAADNK RDP    A+KV ID E  ++ V+N+G+G+PV+ H+E  ++VPE+IFG+L
Sbjct: 64   EILVNAADNKVRDPLGQTAIKVWIDAERGMVRVYNNGEGIPVQRHREHNLWVPEMIFGYL 123

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LTSSNYDD   K TGGRNG+GAKLTN+FS+ F +ET   +  KK+   + NNM +  EP 
Sbjct: 124  LTSSNYDDTEAKVTGGRNGFGAKLTNVFSSRFEVETVHSRSRKKFFMRWRNNMLESEEPV 183

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            I+ C +G ++T V+F PD AKFN+    +D+V +M++RV D+AGC  KS++  LN  ++ 
Sbjct: 184  ITPC-DGPDYTIVTFYPDFAKFNLQGFGEDMVHMMRRRVYDVAGCTDKSLRCYLNDTKIA 242

Query: 264  VKSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
              +F EYVD+YP    +     + RVN RWE+CV +S   FQQVSFVN IAT +GGTHV 
Sbjct: 243  CSTFLEYVDLYPMMGEERKAASYARVNGRWEVCVRVSNIGFQQVSFVNSIATTRGGTHVR 302

Query: 320  YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
            Y+ +QV   V     +K+K   VK H ++ HL+VF+N L++NP FDSQTKETL   ++ F
Sbjct: 303  YITDQVIAKVTEQAKRKSKT-EVKPHMIRPHLFVFINCLVENPGFDSQTKETLNTPKARF 361

Query: 380  GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLA 438
            GS CE     +  +  KS +VE  +  AN K ++++  K      + + GI KL+DAN A
Sbjct: 362  GSICEFPPSMIDCIL-KSSVVERAVEMANSKLTREIASKLRNADRKQILGIPKLDDANEA 420

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            GG++  +CTLILTEGDSAKAL  AGL+V  RD FGVFPLRGK LNVR+A+  +V+  +E 
Sbjct: 421  GGKHGHRCTLILTEGDSAKALCTAGLAVKDRDYFGVFPLRGKPLNVRDAALKKVMACAEF 480

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
              I KI+GL    +   V+ LRYGHLMIM+DQ                            
Sbjct: 481  QAISKIMGLDISKKQTGVEGLRYGHLMIMSDQ---------------------------- 512

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK-----NGKVLSFYSMPDY 613
            DHDGSHIKGL+IN IH +WP L++ P FL +FITPIVKA  K     + + +SF+SMPDY
Sbjct: 513  DHDGSHIKGLIINMIHHYWPDLIRAPGFLQQFITPIVKARRKGRGDGDDRAISFFSMPDY 572

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
              WK ++G    ++ I+YYKGLGTS +KEG+EYF+NI  H+ DFV ED  D   I +AF+
Sbjct: 573  FEWKNAIGDGIRNYEIRYYKGLGTSGAKEGREYFENIDRHRLDFVREDASDEARIVMAFA 632

Query: 674  KKKIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            K K+E RK W+ QF    ++++   Y    ++YS+FV+KELILFS+AD +RSIPSM+DGL
Sbjct: 633  KDKVEERKHWITQFRANTNVNESMNYNVQTVRYSEFVDKELILFSVADCERSIPSMIDGL 692

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRKI+F SFKRN  +  KV Q +GYVSEH+AYHHGEQSL  TI+G+AQDFVG+NN+ 
Sbjct: 693  KPGQRKIIFASFKRNLTRSIKVVQLAGYVSEHAAYHHGEQSLVQTIVGLAQDFVGANNVP 752

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LLQ +GQFGTR QGGKD A+ RYIFTRL+ + R++F   DD ++DY ++DG  +EP +Y+
Sbjct: 753  LLQQDGQFGTRLQGGKDHAAGRYIFTRLTNLARYIFHASDDFVVDYKDDDGLSVEPFYYV 812

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            P+IP VLVNG+ GIGTG+++ IPNY+P D++ N+ RLL GE ++PM PWY GF GTI++ 
Sbjct: 813  PVIPMVLVNGTSGIGTGFATNIPNYSPLDVIDNLMRLLRGEEVQPMKPWYFGFTGTIKE- 871

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSD 969
              KE G  +   G      +  + I ELP+  WTQ Y++FLE +  +    +  +R+++ 
Sbjct: 872  --KEKG-KFVSVGCATVRPDGIVHITELPVGTWTQTYKKFLEEL--REKEVVVQYREHNT 926

Query: 970  DTTVDFEVFLSEESMMRTKQEGLL-KKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
            D T+DFEVF+  E + +   +G + +K +L   I  +N+  FD +G I KY   E +L+ 
Sbjct: 927  DVTIDFEVFVHPEVLQQWVAQGCVEEKLQLREYIHATNIIAFDREGQITKYLDAEAVLKA 986

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ +RLE+Y KR+   + +L     KLEN VRF+  VV+G +VV  R++ +LL ELRQ+G
Sbjct: 987  FYLVRLEYYVKRRDFLIGDLRSVASKLENMVRFVTEVVDGHLVVTRRRKRELLEELRQRG 1046

Query: 1089 FTPFP----KNSKSI-------EAVVAGATDETEE----------------SEENPEVVN 1121
            +TPFP    KN  S        EAV   A   TEE                S E PEV  
Sbjct: 1047 YTPFPPHQKKNMSSTTIQQEDEEAVEDAANAMTEEVFLTLQSAVDAAEDADSGEAPEVQQ 1106

Query: 1122 GVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL 1181
              +  DYDYLL M +  LT E +  L A   K  +E+  L+K TP+ LW  DL+ L  ++
Sbjct: 1107 AAR--DYDYLLGMRLWNLTAEMIARLQAQLQKARDELATLQKQTPKDLWAADLNQLRPRI 1164

Query: 1182 DEL 1184
            ++ 
Sbjct: 1165 EKF 1167


>gi|269860440|ref|XP_002649941.1| DNA topoisomerase II [Enterocytozoon bieneusi H348]
 gi|220066628|gb|EED44103.1| DNA topoisomerase II [Enterocytozoon bieneusi H348]
          Length = 1159

 Score = 1120 bits (2898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/1156 (49%), Positives = 778/1156 (67%), Gaps = 85/1156 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE+YQKK+  EHILLRPDTYIGS+E  TQ+ ++++   + ++ + + + PGLYKIFD
Sbjct: 3    KTIEEIYQKKTPKEHILLRPDTYIGSVEIDTQSAFVWDNMQEKIVLKNVKFAPGLYKIFD 62

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDP+M  +KV I++    +S+ N G+G+P+EIHQ+E VYVPELIFGHLL
Sbjct: 63   EILVNAADNKQRDPRMTYIKVYINEMS--VSIENDGNGIPIEIHQKEQVYVPELIFGHLL 120

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNY+DN KK TGGRNGYGAKL NIFS  F +ET    R  KY QVF NNM    +P I
Sbjct: 121  TSSNYNDNEKKVTGGRNGYGAKLCNIFSVHFEVETVSKGR--KYSQVFKNNMEIIGKPTI 178

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            S    G ++TK++F PD  +F M+  + D++++  KRV D+   + K+ ++ LN  ++ +
Sbjct: 179  S-AYSGKDYTKITFVPDFKRFGMSLFDSDIISIFYKRVYDMCATV-KNTEIYLNDKKLMI 236

Query: 265  KSFAEYVDMY-PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
             +  EY  +Y    V    +++N+RWEI    ++ QF QVSFVN I T KGGTHV++V +
Sbjct: 237  NNLKEYAQLYLSHDVKLVTKKINDRWEIACASTDEQFMQVSFVNSICTSKGGTHVNHVLD 296

Query: 324  QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
            Q+ + +++ V K++K   +K  NVKN+L++F+NALI+NP FDSQTKE LTL+ S+FGSKC
Sbjct: 297  QLMDPLISAVKKRDKTLVLKPLNVKNNLFLFINALIENPIFDSQTKENLTLKSSAFGSKC 356

Query: 384  ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            +  ++ +K +   + I++ +++++  KQ+  LKK DG KT  + GI KLEDAN AG + S
Sbjct: 357  QPIDDIIKDIIKNTDIIDKIITFSKIKQAVLLKKTDGVKTTKIVGIPKLEDANFAGTKRS 416

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
             +CTLILTEGDSAK LA+AGLSVVGRD++GVFPLRGKLLNVREAS+ Q+++N+EI  IKK
Sbjct: 417  SECTLILTEGDSAKTLAVAGLSVVGRDKYGVFPLRGKLLNVREASNKQIMDNAEISAIKK 476

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+ G  Y +  SLRYGH+MIMTDQ                            D DGS
Sbjct: 477  ILGLQHGKTYTDTTSLRYGHIMIMTDQ----------------------------DFDGS 508

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGG- 622
            HIKGL+INF+  F+PSLLKI  FL EFITPIV+AT K  K   F+++P+YE +K+ +   
Sbjct: 509  HIKGLIINFLDYFFPSLLKILGFLQEFITPIVRATKKKEK-YDFFTIPEYEKFKQQIEQI 567

Query: 623  NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
              S W IKYYKGLGTST+ + K+YF N+ LH K F+  + +D E I+LAF+KKK + RK+
Sbjct: 568  KDSGWVIKYYKGLGTSTTDDAKQYFNNLKLHVKTFIPVELEDRELIDLAFNKKKADDRKE 627

Query: 683  WLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
            W+ +FEPG  LDQ    I   DFVNKELILFSMAD  RSIPS++DGLKPGQRK++F  FK
Sbjct: 628  WIGRFEPGTFLDQSMSNITVRDFVNKELILFSMADNIRSIPSVIDGLKPGQRKVIFSCFK 687

Query: 743  RNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQ 802
            RN   E KVAQ  GYVSEHSAYHHGE SLA+TI+ +A DFVGSNNINLL P GQFG+R  
Sbjct: 688  RNLKTEIKVAQLVGYVSEHSAYHHGEASLAATIINLAHDFVGSNNINLLLPLGQFGSRLL 747

Query: 803  GGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEG 862
            GGKD+AS RYIFT L+P++R +F + D  +L+   ED   IEPT+Y+PIIP VLVNG++G
Sbjct: 748  GGKDSASPRYIFTNLNPLSRLIFHEHDIPILESQIEDNLVIEPTYYVPIIPMVLVNGTDG 807

Query: 863  IGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTG 922
            IGTGWS+ IPN+NP D++ N++RLLN +  E M P+YR + GTI K     AG   +   
Sbjct: 808  IGTGWSTNIPNHNPLDLIKNIKRLLNNQEPEEMIPYYRNYKGTITKI---NAGKYISCGK 864

Query: 923  IIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEE 982
            + E +N+  + + ELPI  WTQ Y+E+L+  I   D+ I+ F+ YS D T+D  + ++  
Sbjct: 865  VFENINKKEINVVELPIGVWTQAYKEYLDQAIA--DNVIKSFKDYSTDKTIDILIHMNNN 922

Query: 983  SMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKK 1042
                          KLTT+IST+NM  FD  G IKKY    +IL++F+ +RLEFY KRK 
Sbjct: 923  EFSS----------KLTTSISTNNMVCFDRNGKIKKYHNTLEILKDFYEVRLEFYNKRKI 972

Query: 1043 VQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAV 1102
             +L+ L  EL KL+NKVRFI GV+ G I++  R   +++LEL +K FT +          
Sbjct: 973  YRLKLLADELNKLKNKVRFIEGVITGSIIITQRPLNEIILELERKEFTRYD--------- 1023

Query: 1103 VAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
                                    +Y+YLL M I +LT EK+  L  + +  N E ++L+
Sbjct: 1024 ------------------------NYEYLLDMKISSLTKEKINKLREEYNNKNIEYNELK 1059

Query: 1163 KATPESLWVKDLDALD 1178
              + ++LW +DLD  +
Sbjct: 1060 NKSIKNLWFEDLDKFE 1075


>gi|407843567|gb|EKG01478.1| DNA topoisomerase II, putative [Trypanosoma cruzi]
          Length = 1461

 Score = 1120 bits (2898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/1222 (47%), Positives = 798/1222 (65%), Gaps = 85/1222 (6%)

Query: 24   NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
            N+T+EE+YQKK+Q EHIL RPD YIG+IE  T+ +W+Y+E    M  R  ++ PGLYKIF
Sbjct: 3    NRTVEEIYQKKTQHEHILSRPDMYIGTIEPVTEDMWLYDEAENIMKLRKCTWTPGLYKIF 62

Query: 84   DEILVNAADNKQRDP-KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
            DEILVNAADNK RDP    A+KV ID E  ++ V+N+G+G+PV+ H+E  ++VPE+IFG+
Sbjct: 63   DEILVNAADNKVRDPLGQTAIKVWIDAERGMVRVYNNGEGIPVQRHREHNLWVPEMIFGY 122

Query: 143  LLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP 202
            LLTSSNYDD   K TGGRNG+GAKLTN+FST F +ET   +  KK+   + NNM +  EP
Sbjct: 123  LLTSSNYDDTEAKVTGGRNGFGAKLTNVFSTRFEVETVHSRSRKKFFMRWRNNMLESEEP 182

Query: 203  NISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
             I+   EG ++T V+F PD AKFN+    +D+V +M++RV D+AGC  KS++  LN  ++
Sbjct: 183  VITPS-EGPDYTVVTFYPDFAKFNLQGFGEDMVHMMRRRVYDVAGCTDKSLRCYLNDTKI 241

Query: 263  PVKSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
               SF EYVD+YP    +     + RVN RWE+CV +S   FQQVSFVN IAT +GGTHV
Sbjct: 242  ACSSFLEYVDLYPMMGEERKAASYSRVNGRWEVCVRVSNIGFQQVSFVNSIATTRGGTHV 301

Query: 319  DYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
             Y+ +QV   V     +K+K   VK H ++ HL+VF+N L++NP FDSQTKETL   ++ 
Sbjct: 302  RYITDQVIAKVTEQAKRKSKT-EVKPHMIRPHLFVFINCLVENPGFDSQTKETLNTPKNR 360

Query: 379  FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANL 437
            FGS C+L    +  +  KS IVE  +  AN K ++++  K      + + GI KL+DAN 
Sbjct: 361  FGSTCDLPPSMIDCIL-KSSIVERAVEMANSKLTREIASKLRNADRKQILGIPKLDDANE 419

Query: 438  AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
            AGG++  +CTLILTEGDSAKAL  AGL+V  RD FGVFPLRGK LNVR+A+  +V+  +E
Sbjct: 420  AGGKHGHRCTLILTEGDSAKALCTAGLAVKDRDYFGVFPLRGKPLNVRDATLKKVMACAE 479

Query: 498  IGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLA 557
               + KI+GL    +Y+ V+ LRYGHLMIM+DQ                           
Sbjct: 480  FQAVSKIMGLDIRQKYSGVERLRYGHLMIMSDQ--------------------------- 512

Query: 558  QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK-----NGKVLSFYSMPD 612
             DHDGSHIKGL+IN IH +WP L+K P FL +FITPIVKA  K     + + +SF+SMPD
Sbjct: 513  -DHDGSHIKGLIINMIHHYWPDLIKTPGFLQQFITPIVKARKKGRSDGDDRAISFFSMPD 571

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            Y  WK ++G    ++ I+YYKGLGTS +KEG+EYF+NI  H+ DFV ED  D   I +AF
Sbjct: 572  YFEWKNAIGDGIRNYEIRYYKGLGTSGAKEGREYFENIDRHRLDFVHEDATDDARIVMAF 631

Query: 673  SKKKIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDG 728
            +K K+E RK W+ QF+   ++++   Y    ++YS+FV+KELILFS+AD +RSIPS++DG
Sbjct: 632  AKDKVEERKHWITQFKTNTNVNESMNYNVRTVRYSEFVDKELILFSVADCERSIPSVIDG 691

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKPGQRKI+F SFKR   +  KV Q +GYVSEH+AYHHGEQSL  TI+G+AQ+FVGSNN+
Sbjct: 692  LKPGQRKIIFSSFKRRLTRSIKVVQLAGYVSEHAAYHHGEQSLVQTIVGLAQNFVGSNNV 751

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
             LLQ +GQFGTR QGGKD A+ RYIFTRL+ I R+++   D+ ++DY ++DG  +EP +Y
Sbjct: 752  PLLQQDGQFGTRLQGGKDHAAGRYIFTRLTNIARYIYHPSDEFVVDYKDDDGLSVEPFYY 811

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            +P+IP VLVNG+ GIGTG+++ IPNY+P +++ N+ RLL GE ++PM PWY GF GTIE+
Sbjct: 812  VPVIPMVLVNGTSGIGTGFATNIPNYSPLEVIDNLMRLLRGEEVQPMKPWYFGFTGTIEE 871

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYS 968
               KE G  +  TG      +  ++I ELPI  WTQ Y++FLE +  +    +  +R+++
Sbjct: 872  ---KERG-KFVSTGCANVRPDGVVQITELPIGTWTQGYKKFLEEL--REKEVVVQYREHN 925

Query: 969  DDTTVDFEVFLSEESMMRTKQEGLL-KKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILE 1027
             D TVDFEVFL  E +     +G + ++ +L   I  +N+  FD +G I KY   E +L+
Sbjct: 926  TDVTVDFEVFLHPEVLHHWVAQGCVEERLQLREYIHATNIIAFDREGQITKYRDAEAVLK 985

Query: 1028 EFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK 1087
            EF+ +RLE+Y KR+   + +L     KLEN VRF+  VV+G ++V  R++ +LL ELRQ+
Sbjct: 986  EFYLVRLEYYAKRRDFLIGDLRSVASKLENMVRFVTEVVDGRLIVTRRRKKELLEELRQR 1045

Query: 1088 GFTPFP-KNSKSIEAVVA-------GATDET--------------------EESEENPEV 1119
            G+ PFP +  K + +          GA D T                    E+++E PE+
Sbjct: 1046 GYAPFPLQQKKKVSSTTIQQGEEEEGAADATHSTAEDVFLVLQPAVDEGGDEDNQETPEM 1105

Query: 1120 VNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
                +  DYDYLL M +  LT E +  L +   K  +E+  L K TP+ LW +DL+ L  
Sbjct: 1106 RRAAR--DYDYLLGMRLWNLTAEMIARLQSQLQKARDELAALEKRTPKDLWAEDLNQLRP 1163

Query: 1180 QLDEL--DKSDARAEEERMKIK 1199
            +++ L  D++   A  +R K++
Sbjct: 1164 RIENLFEDRAKEIASIQRKKME 1185


>gi|22830795|dbj|BAC15613.1| DNA topoisomerase II [Aspergillus ochraceus]
          Length = 1101

 Score = 1120 bits (2897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/1143 (51%), Positives = 783/1143 (68%), Gaps = 73/1143 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK +QLEHI+ RPDTYIGS E+ TQ +W+Y   +++M +R +S+VPGLYKIFDEI+VNA
Sbjct: 4    YQKLTQLEHIIKRPDTYIGSTERTTQQMWVYNSGTESMEYRDVSFVPGLYKIFDEIVVNA 63

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK  D KM+ +++ ID+E   ISV N+G G+P+EIH +E +YVPELIFGHLLTSSNYD
Sbjct: 64   ADNKHNDAKMNEMRITIDREAGEISVWNNGRGIPIEIHSKEKIYVPELIFGHLLTSSNYD 123

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ +K TGGRNG+GAKL N+FSTEF +ET D  + KKYKQ +T NM K  +  I+  K G
Sbjct: 124  DSQQKVTGGRNGFGAKLCNVFSTEFTLETQDSHQKKKYKQTWTENMTKMGKAKITDAK-G 182

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++TKV+FKPD AKF M  ++DD  +L+K+RV DLAG    +V V+LNG RV V++F +Y
Sbjct: 183  DDYTKVTFKPDFAKFGMDGIDDDFESLVKRRVYDLAGT--ANVAVKLNGTRVAVRNFRKY 240

Query: 271  VDMYPKSVTRFHERVNE---------------RWEICVTLSEGQFQQVSFVNGIATIKGG 315
            ++MY K++ +  ER ++               RWEI   +S+G FQQVSFVN IAT  GG
Sbjct: 241  MEMYTKAIRK--ERGDDGPPSKDEIITCSPDPRWEIGFAVSDGSFQQVSFVNSIATTSGG 298

Query: 316  THVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            THV+Y+A+Q+   +   V KKNK+ A +K+  ++NH+++FV ALI NPAF SQTKE LT 
Sbjct: 299  THVNYIADQICTRLADQVKKKNKSGATLKSAQIRNHIFIFVKALIVNPAFTSQTKEQLTT 358

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED 434
            + S FGSKC L E+F KKV  K+ ++  +L +A  K  + LKK D  +   +    KL D
Sbjct: 359  KASQFGSKCPLDEDFYKKV-LKTEVMSNILHFAEQKADQILKKGDTGRRTRMNN-PKLVD 416

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG R    CTLILTEG+SAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +Q+  
Sbjct: 417  ANKAGTREGHHCTLILTEGESAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASFDQISK 476

Query: 495  NSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
            N EI +IK  +GL+   EY   K LRYGHLMIMTDQ                        
Sbjct: 477  NVEIQSIKNFIGLQHKKEYTETKGLRYGHLMIMTDQ------------------------ 512

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFYSM 610
                DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPI+K    +     K  SF++M
Sbjct: 513  ----DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIIKVWKGDPKNPTKQKSFFTM 568

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA--I 668
            P+++ W+E+   +   W  KYYKGLGTST+++ + YF+++  H K+F     QDGEA  I
Sbjct: 569  PEHDEWREA-HKHERGWDHKYYKGLGTSTTEDAQVYFRDLDRHLKEF--HTMQDGEAGLI 625

Query: 669  ELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
            ELAFSKKK + RK+WL Q++PG +LD     I Y+DF+NKELILFSMAD QRSIPS+VDG
Sbjct: 626  ELAFSKKKADERKEWLRQYKPGTYLDHSVAKITYTDFINKELILFSMADNQRSIPSVVDG 685

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKPGQRK+L   F+RN  K+ KV + +G+VS  +AYHHG+ SL  TI+G+AQ FVGSNNI
Sbjct: 686  LKPGQRKVLHTCFRRNLKKDMKVVELAGHVSGMTAYHHGDVSLQQTIVGLAQTFVGSNNI 745

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            N L+P+G FG+R QGG D ASARYI+TRLSP  R +F   D+ LL Y  +DG++IEP  +
Sbjct: 746  NCLEPSGNFGSRLQGGGDCASARYIYTRLSPFARKIFNTADEPLLTYNEDDGKKIEPEVF 805

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            MP++P +L+NG++GIGTGWSS IPNYNP D+V N++RL+ G+  EPM PW+RGF G +  
Sbjct: 806  MPVVPMILINGADGIGTGWSSSIPNYNPEDVVNNLKRLMAGQPTEPMQPWFRGFTGEVVA 865

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQ 966
                  G  Y  +GII E  +  + I ELPIR WTQD+++ LE II  ++  SFI+ +R 
Sbjct: 866  V----GGDRYKFSGIIRECGDKEVEITELPIRTWTQDFKDKLEEIIKAEKVPSFIKDYRD 921

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
            Y+  T V F + L E+ M     EGL +KFKLT +I+T+N+  FD +G I KY T + IL
Sbjct: 922  YNTHTKVHFIIQLDEKHMKVALTEGLEEKFKLTKSIATTNLVAFDPEGRITKYATVDDIL 981

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
            +EF+ +RL++YE+RK+ QL +L+ EL KL N+ RF+  +++G++V++ +K+  L+ EL++
Sbjct: 982  KEFYVVRLKYYERRKQFQLNDLQRELEKLSNQARFVQMIIDGKLVISKKKKPVLITELKE 1041

Query: 1087 KGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNG----VQSIDYDYLLSMAIGTLTLE 1142
            KGF P    +K  EA   G  +   E EE  E  +     V S  +DYLL M + +LT E
Sbjct: 1042 KGFKPI---AKVAEAAKMGEDEPVVEEEEGEEESDDTEAQVLSGSFDYLLGMPMWSLTHE 1098

Query: 1143 KVQ 1145
            +V+
Sbjct: 1099 RVE 1101


>gi|17535065|ref|NP_496536.1| Protein TOP-2 [Caenorhabditis elegans]
 gi|6175065|sp|Q23670.2|TOP2_CAEEL RecName: Full=Probable DNA topoisomerase 2; AltName: Full=DNA
            topoisomerase II
 gi|3878527|emb|CAA88867.1| Protein TOP-2 [Caenorhabditis elegans]
          Length = 1520

 Score = 1119 bits (2895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 604/1220 (49%), Positives = 808/1220 (66%), Gaps = 90/1220 (7%)

Query: 19   GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQ--ALWIYEEESKTMIHRTISYV 76
            G  +    IE++YQKKSQLEHILLRPDTYIGS+E HT+   +W+Y  E   +  R ISYV
Sbjct: 55   GGGSKQMAIEDIYQKKSQLEHILLRPDTYIGSVE-HTEKTPMWVYNMEESKLEQRDISYV 113

Query: 77   PGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVP 136
            PGLYKI+DEILVNAADNKQRDPKM+ +K+ I++E + ISV+N+G G+PV  H+ E VYVP
Sbjct: 114  PGLYKIYDEILVNAADNKQRDPKMNTIKITINKEKNEISVYNNGKGIPVTQHKVEKVYVP 173

Query: 137  ELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
            ELIFG LLTSSNY+D+ KK TGGRNGYGAKL NIFST+F +ET+       +KQ +  NM
Sbjct: 174  ELIFGTLLTSSNYNDDEKKVTGGRNGYGAKLCNIFSTKFTLETSSRDYKSAFKQTWIKNM 233

Query: 197  GKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVE 256
             +  EP I K  + D +TK++F PDLAKF M  L+DD+  LM +R  D+AG   K V V 
Sbjct: 234  TRDEEPKIVKSTDED-FTKITFSPDLAKFKMKELDDDICHLMARRAYDVAGS-SKGVAVF 291

Query: 257  LNGHRVPVKSFAEYVDMYPKSVTR-------FHERVNERWEICVTLSEGQFQQVSFVNGI 309
            LNG R+P+K F +YV MY              +E+V +RW++ + LSE  FQQVSFVN I
Sbjct: 292  LNGKRIPIKGFEDYVQMYTSQFNNEGEPLKIAYEQVGDRWQVALALSEKGFQQVSFVNSI 351

Query: 310  ATIKGGTHVDYVANQ-VANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            AT KGG HVDYVA+Q VA  + ++  K  K + N+K   +KNH+WVFVN LI+NP FDSQ
Sbjct: 352  ATTKGGRHVDYVADQMVAKFIDSIKRKLTKTSMNIKPFQIKNHMWVFVNCLIENPTFDSQ 411

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDV 426
            TKET+TL+Q  FGS C LSE+F  K  +  GI + ++SW  FKQ  DL KK   TKT  +
Sbjct: 412  TKETMTLQQKQFGSTCVLSEKF-SKAASSVGITDAVMSWVRFKQMDDLNKKCSKTKTSKL 470

Query: 427  RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
            +GI KLEDAN AG +NS+QCTLILTEGDSAK LA++GLSVVGRD++GVFPLRGKLLNVRE
Sbjct: 471  KGIPKLEDANDAGTKNSQQCTLILTEGDSAKTLAVSGLSVVGRDKYGVFPLRGKLLNVRE 530

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFI 543
             +  Q+ +N+E+  + KILGL+   +Y   ++ K+LRYG LM+M DQ             
Sbjct: 531  GNMKQIADNAEVNAMIKILGLQYKKKYETEDDFKTLRYGKLMVMADQ------------- 577

Query: 544  LIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK 603
                           D DGSHIKGL+INFIH FWPSL++  +F+ EFITPIVKAT K  +
Sbjct: 578  ---------------DQDGSHIKGLVINFIHHFWPSLIQ-RNFVEEFITPIVKAT-KGKE 620

Query: 604  VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
             +SFYS+P+Y  W+ +   N  S+ IKYYKGLGTSTSKE KEYF ++  H+  F +    
Sbjct: 621  EVSFYSLPEYSEWRMNTD-NWKSYKIKYYKGLGTSTSKEAKEYFLDMVRHRIRFKYNGAD 679

Query: 664  DGEAIELAFSKKKIEARKKWLLQF--------EPG---NHLDQKE-KYIKYSDFVNKELI 711
            D  A+++AFSKKKIE RK WL ++        + G    +L  K+ +++ + DFVN+EL+
Sbjct: 680  DDNAVDMAFSKKKIEERKDWLSKWMREKKDRKQQGLAEEYLYNKDTRFVTFKDFVNRELV 739

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            LFS  D +RSIP +VDG KPGQRK+LF  FKR   +E KVAQ +G V+E SAYHHGEQSL
Sbjct: 740  LFSNLDNERSIPCLVDGFKPGQRKVLFACFKRADKREVKVAQLAGAVAEISAYHHGEQSL 799

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
              TI+ +AQD+VGSNNINLL P GQFGTR QGGKD+ASARYIFT+LSP+TR LFP  DD 
Sbjct: 800  MGTIVNLAQDYVGSNNINLLLPIGQFGTRLQGGKDSASARYIFTQLSPVTRTLFPAHDDN 859

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            +L +L E+ Q+IEP WY PIIP VLVNG++GIGTGWS+ IPNYNPR++V N++RL+ GE 
Sbjct: 860  VLRFLYEENQRIEPEWYCPIIPMVLVNGAQGIGTGWSTNIPNYNPRELVKNIKRLIAGEP 919

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FL 950
             + + PWY+ F G I +         +   G +  +++ T+ I ELPI++WTQDY+E  L
Sbjct: 920  QKALAPWYKNFRGKIIQIDPSR----FACYGEVAVLDDNTIEITELPIKQWTQDYKEKVL 975

Query: 951  ESIIDQNDS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQ-EGLLKKFKLTTTISTSN 1006
            E +++ +D     I  +++Y  DTTV F V LS   +   ++ + L + FKL   I+T+ 
Sbjct: 976  EGLMESSDKKSPVIVDYKEYHTDTTVKFVVKLSPGKLRELERGQDLHQVFKLQAVINTTC 1035

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            M LFD+ G ++ Y +PE I +EF+  R E Y +RK+  L  L+ +  +L N+ RFIL  +
Sbjct: 1036 MVLFDAAGCLRTYTSPEAITQEFYDSRQEKYVQRKEYLLGVLQAQSKRLTNQARFILAKI 1095

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEES-------EE 1115
            N EIV+ N+K+  ++  L +  F   P    K  + ++ +      E +E        EE
Sbjct: 1096 NNEIVLENKKKAAIVDVLIKMKFDADPVKKWKEEQKLKELRESGEIELDEDDLAAVAVEE 1155

Query: 1116 NPEVVNGVQSI-----DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLW 1170
            +  + +  +++     DYDYL+ MA+  L+ E+   L+ + ++   EV  + K T + LW
Sbjct: 1156 DEAISSAAKAVETKLSDYDYLVGMALIKLSEEEKNKLIKESEEKMAEVRVIEKKTWQDLW 1215

Query: 1171 VKDLDALDMQLDELDKSDAR 1190
             +DLD     + ELDK +AR
Sbjct: 1216 HEDLDNF---VSELDKQEAR 1232


>gi|448123839|ref|XP_004204766.1| Piso0_000036 [Millerozyma farinosa CBS 7064]
 gi|358249399|emb|CCE72465.1| Piso0_000036 [Millerozyma farinosa CBS 7064]
          Length = 1409

 Score = 1119 bits (2894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/1273 (45%), Positives = 826/1273 (64%), Gaps = 102/1273 (8%)

Query: 8    PLTTSNNANVVGPTAPNKTI----EEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEE 63
            PLT + N+     T P+K       + Y++ SQLEHIL RPDTYIGS+E+    +W ++ 
Sbjct: 34   PLTDTTNS-----TTPSKNAVSDASDQYKRLSQLEHILKRPDTYIGSVERSPMEMWSFDT 88

Query: 64   ESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGV 123
            ES++M+  T+S VPGLYKIFDEILVNAADNK RDP M  +KV ID E+++ISV N G G+
Sbjct: 89   ESESMVFGTVSIVPGLYKIFDEILVNAADNKIRDPNMKNIKVKIDAENNMISVMNDGKGI 148

Query: 124  PVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGK 183
            PVEIH++E +Y+PELIFG+LLTSSNYDD+ +K TGGRNGYGAKL NIFST+F++ETAD  
Sbjct: 149  PVEIHKKEKIYIPELIFGNLLTSSNYDDDERKVTGGRNGYGAKLCNIFSTDFVLETADKN 208

Query: 184  RLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVV 243
                Y+Q + +NM + S+P ++K K    +T+VSFKPDL KF M  L+ D +A++ +RV 
Sbjct: 209  TGLVYRQQWNDNMSRMSKPKVTKMKTKTEYTRVSFKPDLGKFGMDSLDKDTLAVLTRRVY 268

Query: 244  DLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV--------------TRFHERVNERW 289
            DL G + K+  + LN  ++ +K F  YV +Y K++              T  +E +N+RW
Sbjct: 269  DLCGTV-KNCNIYLNDKKLDIKGFKNYVQLYVKAIKDRSPAQFADSNKPTLVYEVINDRW 327

Query: 290  EICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKN 349
            E+   +S+G F QVSFVN IAT  GG+HV Y+ +Q+ N +   +++ +K + +K +++KN
Sbjct: 328  EVAFAVSDGVFNQVSFVNSIATTSGGSHVKYITDQIVNKLTENLSRGDKKSKIKPNDIKN 387

Query: 350  HLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE----LSEEFLKKVTAKSGIVETLLS 405
            ++++FVN LI+NPAF SQTKE LT + S FG K +    +S  F+ K+   S IV+ + +
Sbjct: 388  NMFLFVNCLIENPAFTSQTKEHLTTKVSQFGGKKDDKILVSSGFISKIMNTS-IVDIIKA 446

Query: 406  WANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLS 465
              + ++  +L+K DG++   ++   KL DAN AG +   +CTLILTEGDSA +LA+AGL+
Sbjct: 447  ARSAREDIELQKADGSRKSRIKNQVKLVDANKAGTKEGHKCTLILTEGDSALSLAVAGLA 506

Query: 466  VVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGH 523
            VVGR+ +G FPLRGKLLNVREAS++Q+  N+EI  +K+I+GLK  V Y+  N+K LRYGH
Sbjct: 507  VVGRNYYGCFPLRGKLLNVREASADQIAKNAEINALKQIIGLKHKVHYSLENIKDLRYGH 566

Query: 524  LMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI 583
            +MIMTD                            QDHDGSHIKGL+INF+ + +P LL+I
Sbjct: 567  IMIMTD----------------------------QDHDGSHIKGLIINFLDTSFPGLLQI 598

Query: 584  PSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEG 643
            P FL+EFITPIVK   KN KVLSFY+MP++E W+E+  G    W  KYYKGLGTST  EG
Sbjct: 599  PGFLLEFITPIVKVFLKNKKVLSFYTMPEFEQWRET-EGKTQRWRHKYYKGLGTSTLMEG 657

Query: 644  KEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYS 703
            +EYF  +  H K F      D  +I+LAFSKKK + RK+WL  FEPG HLD   + I  S
Sbjct: 658  REYFAALDRHLKKFHALQGDDKSSIDLAFSKKKADDRKEWLQCFEPGTHLDPLLQEIPIS 717

Query: 704  DFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSA 763
            DF+NKELILFSMAD  RSIPS++DGLKPGQRK+L+  F+RN   + KV+Q +GYVSE++ 
Sbjct: 718  DFINKELILFSMADNIRSIPSVLDGLKPGQRKVLYACFRRNLTVDIKVSQLAGYVSENTG 777

Query: 764  YHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRF 823
            YHHGE SL  TI+G+AQDF+GSNN+N+L+P G FG+R  GGKD ++ARYIFT+LS IT+ 
Sbjct: 778  YHHGEASLVQTIIGLAQDFIGSNNLNVLKPIGTFGSRAAGGKDFSAARYIFTQLSEITKK 837

Query: 824  LFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANV 883
            +F   D+ L  Y+ ED   +EP WY+P++P VLVNG+EGIGTGWS+ IP +NP DIV N+
Sbjct: 838  VFNPLDNPLYTYVQEDEGTVEPEWYLPVLPMVLVNGAEGIGTGWSTNIPPFNPTDIVQNI 897

Query: 884  RRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWT 943
            RRL+ GE M PM PW++G+ G I+  +  +    + V G IE+++ TTL I E+P + W 
Sbjct: 898  RRLMAGEEMIPMTPWFKGWEGEIQPISQDK----FRVMGTIEQIDNTTLEISEIPPKTWI 953

Query: 944  QDYREFLESIID--QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTT 1001
             + +EFL S +D  ++  +I+   ++     + F + LSEE M ++ + GLL++FKL + 
Sbjct: 954  NNMKEFLLSGLDSKKDKPWIKDVEEHH-GMNIKFIIKLSEEEMAKSHKIGLLERFKLISV 1012

Query: 1002 ISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRF 1061
            I+ SNM LFD  G IKKY++P QIL EFF++RLE+Y++RK    + L+ +LLKL  + RF
Sbjct: 1013 INLSNMVLFDPSGRIKKYESPLQILREFFYVRLEYYQRRKDFLTDKLQNQLLKLSEQARF 1072

Query: 1062 ILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIE--------------------- 1100
            I  +++ +I ++N+KR+ L+ +L++  F  F K+ K ++                     
Sbjct: 1073 IKHIIDNKISLSNKKRSVLVKQLQELDFAMFDKDGKKVQEVGEESLFVDPEELMEEEEQQ 1132

Query: 1101 -----AVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLN 1155
                  V A  TD     E  P+ V       YDYLL M + +LT E+ + LL+ +D   
Sbjct: 1133 AEDITQVKASTTDNN--GEHKPDTVYAY----YDYLLGMTMWSLTKERYEKLLSQKDDKE 1186

Query: 1156 EEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIV---A 1212
            +E++ L + + + LW +DL+   +  ++  + D       + +KG        +      
Sbjct: 1187 KELNILLRKSAKDLWNEDLEDFMVSWEKFLQEDLENRSTLIPMKGTKKSAKRTRTTKQSK 1246

Query: 1213 KRAPKNARKNDKK 1225
            +  PK  + N+KK
Sbjct: 1247 QEPPKKKQANEKK 1259


>gi|83367164|gb|ABC17641.1| DNA topoisomerase IIalpha [Trypanosoma brucei]
          Length = 1455

 Score = 1118 bits (2893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/1206 (47%), Positives = 796/1206 (66%), Gaps = 85/1206 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            +T+EE+YQKK+Q EHIL RPD YIG+IE  T+ +W+Y+E    M  R  ++ PGLYKIFD
Sbjct: 4    RTVEEIYQKKTQHEHILARPDMYIGTIEPVTEDVWVYDEADNVMKLRKCTWTPGLYKIFD 63

Query: 85   EILVNAADNKQRDPK-MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            EILVNAADNK RDP     +KV +D    L+ V+N+G+G+PV+ H+E  ++VPE+IFGHL
Sbjct: 64   EILVNAADNKVRDPHGQTTIKVWVDAARGLVRVYNNGEGIPVQRHREHDLWVPEMIFGHL 123

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LTSSNYDD   K TGGRNG+GAKLTN+FST F +ET   +  KK+   + NNM +  E  
Sbjct: 124  LTSSNYDDTEAKVTGGRNGFGAKLTNVFSTRFEVETVHSRSRKKFFMRWRNNMLENEEAV 183

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            I+ C +G ++T V+F PD  KFN+    +D+V +M++RV D+AGC  KS+   LN  R+ 
Sbjct: 184  ITPC-DGPDYTVVTFYPDFEKFNLEGFTEDMVLIMQRRVYDIAGCTDKSLCCYLNDTRIA 242

Query: 264  VKSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
             +SF EYVD+YP    +     + RVN+RWE+CV +S   FQQVSFVN IAT +GGTHV 
Sbjct: 243  CRSFPEYVDLYPTMGEERKPSSYSRVNDRWEVCVRVSNVGFQQVSFVNSIATTRGGTHVK 302

Query: 320  YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
            Y+ +Q+   V     +K+K   VK H ++ HL++FVN+LI+NP+FDSQTKETL   ++ F
Sbjct: 303  YIVDQIIAKVTDQAMRKSKT-EVKPHMIRPHLFIFVNSLIENPSFDSQTKETLNTPKARF 361

Query: 380  GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK-KNDGTKTEDVRGISKLEDANLA 438
            GS C+L    +  V  KS IVE  +  AN + ++++  K   T  + + GI KL+DAN A
Sbjct: 362  GSTCDLPASLIDCVL-KSSIVERAVEMANSRLNREMAMKMRNTNRKQILGIPKLDDANEA 420

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            GG+ S++CTLILTEGDSAKAL  AGL+V  RD FGVFPLRGK LNVR+AS  +V+  +E 
Sbjct: 421  GGKYSQRCTLILTEGDSAKALCTAGLAVENRDYFGVFPLRGKPLNVRDASVKKVMGCAEF 480

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
              + KI+GL    +Y + + LRYGHLMIM+DQ                            
Sbjct: 481  QAVSKIMGLDLSQKYTSTEGLRYGHLMIMSDQ---------------------------- 512

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT-----NKNGKVLSFYSMPDY 613
            DHDGSHIKGL+IN IH++WP LLK+P FL +FITPIVKA      N +   +SF+SMPDY
Sbjct: 513  DHDGSHIKGLIINMIHNYWPDLLKVPGFLQQFITPIVKARKKGRGNSDEGTISFFSMPDY 572

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
              WK ++G    ++ ++YYKGLGTS +KEG+EYF+NI  H+ +FV+ED +D + I +AF+
Sbjct: 573  FEWKNAVGEGIKNYELRYYKGLGTSGAKEGREYFENIDRHRLNFVYEDRKDDDDIVMAFA 632

Query: 674  KKKIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            K K++ RK+W+ +F+   ++++   Y    + YS+FV+KELILFS+AD +RSIPS+VDGL
Sbjct: 633  KDKVDERKRWITEFKANTNINESMNYNVRNVSYSEFVHKELILFSVADCERSIPSVVDGL 692

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRKI+F +FKRN ++  KVAQ +GYVSEH+AYHHGEQSL  TI+G+AQD+VG+NN+ 
Sbjct: 693  KPGQRKIMFSAFKRNLVRSLKVAQLAGYVSEHAAYHHGEQSLVQTIVGLAQDYVGANNVP 752

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL  +GQFGTR QGGKD A+ RYIFTRL+ I R ++   DD +++Y ++DG  +EP +Y+
Sbjct: 753  LLYRDGQFGTRLQGGKDHAAGRYIFTRLTDIARRIYHPSDDFIVEYRDDDGLSVEPFYYV 812

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            P+IP VLVNG+ GIGTG+++ IPNY+P D++ N+ RLL+GE ++PM PWY GF GTIE+ 
Sbjct: 813  PVIPMVLVNGTAGIGTGFATNIPNYSPLDVIDNLNRLLSGEELQPMKPWYFGFTGTIEE- 871

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSD 969
              +E G  +  +G      +  + I ELPI  WTQ Y++FLE + ++    +  +R+++ 
Sbjct: 872  --REKG-KFVSSGCATVRPDGVVHITELPIGTWTQQYKKFLEDLRER--EIVIQYREHNT 926

Query: 970  DTTVDFEVFLSEESMMRTKQEGLLK-KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
            D TVDFEVF+  E + +   +G ++ + +L   I  +N+  FD +G I KY   E +L+E
Sbjct: 927  DVTVDFEVFIHPEVLRQWVAQGCVEERLQLREYIHATNIIAFDREGKITKYLDAESVLKE 986

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ +RLE+Y +R++  LE L+   LKLEN VRF+  V++G  +V  R   D+L +L+Q+G
Sbjct: 987  FYLVRLEYYARRREFLLEQLQRAALKLENMVRFVNEVIDGTFIVTRRSMKDVLKDLKQRG 1046

Query: 1089 FTPFPKNSK---SIEAVV-----------AGATDETEES----------------EENPE 1118
            +TPFP   K   S   +V           A  + + EE+                +E PE
Sbjct: 1047 YTPFPPQQKKKMSSTTIVDEEEETERRNTAATSADAEEAIVLQPDELIGPGGGGAQEEPE 1106

Query: 1119 VVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
            V    +  DYDYLL + +  LT E    L A  D   E+ +++ K TP+ LW +DLD L 
Sbjct: 1107 VKQNAR--DYDYLLGLRLWNLTAEMSARLKAQLDAAREKYENIAKRTPKDLWREDLDLLR 1164

Query: 1179 MQLDEL 1184
              +++L
Sbjct: 1165 PDVEKL 1170


>gi|261335183|emb|CBH18177.1| DNA topoisomerase II, putative [Trypanosoma brucei gambiense DAL972]
          Length = 1455

 Score = 1118 bits (2893), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/1206 (47%), Positives = 796/1206 (66%), Gaps = 85/1206 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            +T+EE+YQKK+Q EHIL RPD YIG+IE  T+ +W+Y+E    M  R  ++ PGLYKIFD
Sbjct: 4    RTVEEIYQKKTQHEHILARPDMYIGTIEPVTEDVWVYDEADNVMKLRKCTWTPGLYKIFD 63

Query: 85   EILVNAADNKQRDPK-MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            EILVNAADNK RDP     +KV +D    L+ V+N+G+G+PV+ H+E  ++VPE+IFGHL
Sbjct: 64   EILVNAADNKVRDPHGQTTIKVWVDAARGLVRVYNNGEGIPVQRHREHDLWVPEMIFGHL 123

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LTSSNYDD   K TGGRNG+GAKLTN+FST F +ET   +  KK+   + NNM +  E  
Sbjct: 124  LTSSNYDDTEAKVTGGRNGFGAKLTNVFSTRFEVETVHSRSRKKFFMRWRNNMLENEEAV 183

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            I+ C +G ++T V+F PD  KFN+    +D+V +M++RV D+AGC  KS+   LN  R+ 
Sbjct: 184  ITPC-DGPDYTVVTFYPDFEKFNLEGFTEDMVLIMQRRVYDIAGCTDKSLCCYLNDTRIA 242

Query: 264  VKSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
             +SF EYVD+YP    +     + RVN+RWE+CV +S   FQQVSFVN IAT +GGTHV 
Sbjct: 243  CRSFPEYVDLYPTMGEERKPSSYSRVNDRWEVCVRVSNVGFQQVSFVNSIATTRGGTHVK 302

Query: 320  YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
            Y+ +Q+   V     +K+K   VK H ++ HL++FVN+LI+NP+FDSQTKETL   ++ F
Sbjct: 303  YIVDQIIAKVTDQAMRKSKT-EVKPHMIRPHLFIFVNSLIENPSFDSQTKETLNTPKARF 361

Query: 380  GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK-KNDGTKTEDVRGISKLEDANLA 438
            GS C+L    +  V  KS IVE  +  AN + ++++  K   T  + + GI KL+DAN A
Sbjct: 362  GSTCDLPASLIDCVL-KSSIVERAVEMANSRLNREMAMKMRNTNRKQILGIPKLDDANEA 420

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            GG+ S++CTLILTEGDSAKAL  AGL+V  RD FGVFPLRGK LNVR+AS  +V+  +E 
Sbjct: 421  GGKYSQRCTLILTEGDSAKALCTAGLAVENRDYFGVFPLRGKPLNVRDASVKKVMGCAEF 480

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
              + KI+GL    +Y + + LRYGHLMIM+DQ                            
Sbjct: 481  QAVSKIMGLDLSQKYTSTEGLRYGHLMIMSDQ---------------------------- 512

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT-----NKNGKVLSFYSMPDY 613
            DHDGSHIKGL+IN IH++WP LLK+P FL +FITPIVKA      N +   +SF+SMPDY
Sbjct: 513  DHDGSHIKGLIINMIHNYWPDLLKVPGFLQQFITPIVKARKKGRGNSDEGTISFFSMPDY 572

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
              WK ++G    ++ ++YYKGLGTS +KEG+EYF+NI  H+ +FV+ED +D + I +AF+
Sbjct: 573  FEWKNAVGEGIKNYELRYYKGLGTSGAKEGREYFENIDRHRLNFVYEDRKDDDDIVMAFA 632

Query: 674  KKKIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            K K++ RK+W+ +F+   ++++   Y    + YS+FV+KELILFS+AD +RSIPS+VDGL
Sbjct: 633  KDKVDERKRWITEFKANTNINESMNYNVRNVSYSEFVHKELILFSVADCERSIPSVVDGL 692

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRKI+F +FKRN ++  KVAQ +GYVSEH+AYHHGEQSL  TI+G+AQD+VG+NN+ 
Sbjct: 693  KPGQRKIMFSAFKRNLVRSLKVAQLAGYVSEHAAYHHGEQSLVQTIVGLAQDYVGANNVP 752

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL  +GQFGTR QGGKD A+ RYIFTRL+ I R ++   DD +++Y ++DG  +EP +Y+
Sbjct: 753  LLYRDGQFGTRLQGGKDHAAGRYIFTRLTDIARRIYHPSDDFIVEYRDDDGLSVEPFYYV 812

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            P+IP VLVNG+ GIGTG+++ IPNY+P D++ N+ RLL+GE ++PM PWY GF GTIE+ 
Sbjct: 813  PVIPMVLVNGTAGIGTGFATNIPNYSPLDVIDNLNRLLSGEELQPMKPWYFGFTGTIEE- 871

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSD 969
              +E G  +  +G      +  + I ELPI  WTQ Y++FLE + ++    +  +R+++ 
Sbjct: 872  --REKG-KFVSSGCATVRPDGVVHITELPIGTWTQQYKKFLEDLRER--EIVIQYREHNT 926

Query: 970  DTTVDFEVFLSEESMMRTKQEGLLK-KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
            D TVDFEVF+  E + +   +G ++ + +L   I  +N+  FD +G I KY   E +L+E
Sbjct: 927  DVTVDFEVFIHPEVLRQWVAQGCVEERLQLREYIHATNIIAFDREGKITKYLDAESVLKE 986

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ +RLE+Y +R++  LE L+   LKLEN VRF+  V++G  +V  R   D+L +L+Q+G
Sbjct: 987  FYLVRLEYYARRREFLLEQLQRAALKLENMVRFVNEVIDGTFIVTRRSMKDVLKDLKQRG 1046

Query: 1089 FTPFPKNSK---SIEAVV-----------AGATDETEES----------------EENPE 1118
            +TPFP   K   S   +V           A  + + EE+                +E PE
Sbjct: 1047 YTPFPPQQKKKMSSTTIVDEEEETERRNTAATSADAEEAIVLQPDELIGPGGGGAQEEPE 1106

Query: 1119 VVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
            V    +  DYDYLL + +  LT E    L A  D   E+ +++ K TP+ LW +DLD L 
Sbjct: 1107 VKQNAR--DYDYLLGLRLWNLTAEMSARLKAQLDAAREKYENIAKRTPKDLWREDLDLLR 1164

Query: 1179 MQLDEL 1184
              +++L
Sbjct: 1165 PDVEKL 1170


>gi|344231970|gb|EGV63849.1| DNA topoisomerase II [Candida tenuis ATCC 10573]
 gi|344231971|gb|EGV63850.1| hypothetical protein CANTEDRAFT_104632 [Candida tenuis ATCC 10573]
          Length = 1429

 Score = 1118 bits (2892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 583/1200 (48%), Positives = 798/1200 (66%), Gaps = 89/1200 (7%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E YQ+ SQLEHIL RPDTYIGS+EK    +W ++  ++ M+ + ++ VPGLYKIFDEILV
Sbjct: 50   EQYQRLSQLEHILKRPDTYIGSVEKSPIEMWCFDAATEQMVFKEVTIVPGLYKIFDEILV 109

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNK RDP M  +KV ID E+++I V N G G+PVEIH +E +Y+PELIFG+LLTSSN
Sbjct: 110  NAADNKIRDPTMKNIKVKIDPENNIIEVMNDGKGIPVEIHSKENMYIPELIFGNLLTSSN 169

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD+ KK TGGRNGYGAKL NIFSTEF +ETAD    K YKQV++ NM K ++P I+  K
Sbjct: 170  YDDDEKKVTGGRNGYGAKLCNIFSTEFQLETADASNEKSYKQVWSGNMSKVNKPRITALK 229

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
                +T+V+FKPDL+KF M  L+D+++++M++RV DL G + K   + LN  ++ +++F 
Sbjct: 230  TKKEFTRVTFKPDLSKFGMDTLDDEILSVMRRRVYDLCGTV-KDCNIYLNDKKLSIRNFK 288

Query: 269  EYVDMYPKSV----------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIATI 312
             YV+MY K++                T  HE  NE WEI   +S+G F QVSFVN IAT 
Sbjct: 289  SYVEMYVKAIKERNPESSEDEEKKFQTIVHEVFNESWEIAFAVSDGTFNQVSFVNSIATT 348

Query: 313  KGGTHVDYVANQVANHVMAVVNKKNKNAN---VKAHNVKNHLWVFVNALIDNPAFDSQTK 369
             GGTHV ++++ +   ++  +NKK K      ++   V+N++++F+N LI+NPAF SQTK
Sbjct: 349  SGGTHVKFISDAIITKLVDSINKKEKGKKKLMIRPQEVRNNMFLFINCLIENPAFTSQTK 408

Query: 370  ETLTLRQSSFGSKCE----LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED 425
            E LT + + F SK      +S+ F+ ++  K+ IV+ + S AN  + K L+K DG+K   
Sbjct: 409  EQLTTKSNQFHSKASDKLVISDNFITRI-LKTSIVDKIKSIANANEDKALQKADGSKKSR 467

Query: 426  VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
            V+G  KL DAN AG +   +CTLILTEGDSA +LA+AGL+V+GRD +G FPLRGKLLNVR
Sbjct: 468  VKGQVKLVDANKAGTKEGHKCTLILTEGDSALSLAVAGLTVIGRDYYGCFPLRGKLLNVR 527

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFI 543
            EAS++QV  N EI  +K+I+GL+   +Y   NV  LRYGH+MIMTDQ             
Sbjct: 528  EASTDQVSKNVEINALKQIIGLQHKKKYTPENVSQLRYGHIMIMTDQ------------- 574

Query: 544  LIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT----N 599
                           D DGSHIKGL+INF+ S +P LL+IP FL+EFITPIVK T     
Sbjct: 575  ---------------DQDGSHIKGLIINFLESSFPGLLEIPGFLLEFITPIVKVTVSQRG 619

Query: 600  KNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
             + KVLSFY+MP++E W+E+  G    W  KYYKGLGTST  E +EYF  +  H K F  
Sbjct: 620  SSKKVLSFYTMPEFENWRET-EGTRCRWKQKYYKGLGTSTDVEAREYFAALDKHLKQFHA 678

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
               +D + I+LAFSKKK + RK WL +F+PG HLD + K I  SDF+NKELILFSMAD  
Sbjct: 679  IQGEDPDLIDLAFSKKKADERKNWLQEFQPGTHLDPELKIIPISDFINKELILFSMADNV 738

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS++DG KPGQRK+LF  FKRN   E KVAQ +GYVSEH+ YHHGEQSL  TI+G+A
Sbjct: 739  RSIPSVLDGFKPGQRKVLFGCFKRNLKSEIKVAQLAGYVSEHTGYHHGEQSLIQTIIGLA 798

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+F+GSNN+NLL+PNG FGTR  GGKD ++ARYIFT ++ ITR +F   D+ LL Y+ ED
Sbjct: 799  QNFIGSNNLNLLKPNGAFGTRAAGGKDFSAARYIFTEINEITRKIFNPLDNGLLTYVQED 858

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q +EP WY+PIIP +LVNG+EGIGTGWS+ IP YNP DIVAN+R+L+N E +E M PWY
Sbjct: 859  EQTVEPEWYLPIIPMILVNGAEGIGTGWSTNIPCYNPEDIVANIRKLMNNEELEEMFPWY 918

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQN 957
            RG+ G +E   SKE    + V+G IE++++ TL I E+P++ WT + +EFL S +  D+ 
Sbjct: 919  RGWEGDLE-IISKEK---FKVSGRIEQIDDQTLEITEIPVKTWTNNVKEFLLSGLGNDKV 974

Query: 958  DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIK 1017
              +I+   +      + F V LS+E M ++ Q GLL +FKL ++I+ +NM  FD +G IK
Sbjct: 975  KPWIKDMEE-QHGMNIRFVVKLSQEEMAKSHQVGLLDRFKLISSINLTNMVAFDPRGKIK 1033

Query: 1018 KYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
            KY++  +IL++F+++RLEFY+KRK   ++ L+ +L KL  + RFI  ++   I V+N+KR
Sbjct: 1034 KYESSLEILKDFYYVRLEFYQKRKDFMIDELKNQLDKLTEQARFIKLIIEKVISVSNKKR 1093

Query: 1078 TDLLLELRQKGFTPFPKNSKSIEA--------VVAGATDETEESEENPEVVNGVQSI--- 1126
             +L+  L++  F  F K +K ++         V     +E E + +  E+  G  ++   
Sbjct: 1094 KELIEILQKHKFKRFNKQNKVVKTEDDSETLFVDEEDIEEEENNADISELNVGNTTVNEE 1153

Query: 1127 -----------DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
                        YDYLL M++ +LT E+ + LL  RD   +E++DL + + + LW  DLD
Sbjct: 1154 EEENKPENIFQQYDYLLGMSLWSLTRERYEKLLRQRDDKEQELNDLLRLSAKDLWNSDLD 1213


>gi|403304571|ref|XP_003942869.1| PREDICTED: DNA topoisomerase 2-alpha [Saimiri boliviensis
            boliviensis]
          Length = 1471

 Score = 1118 bits (2892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 590/1171 (50%), Positives = 788/1171 (67%), Gaps = 76/1171 (6%)

Query: 58   LWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVH 117
            +W+Y+E+   + +R +++VPGLYKIFDEILVNAADNKQRDPKM  ++V ID E++LIS+ 
Sbjct: 1    MWVYDEDV-GINYREVTFVPGLYKIFDEILVNAADNKQRDPKMSCIRVTIDPENNLISIW 59

Query: 118  NSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFII 177
            N+G G+PV  H+ E +YVP LIFG LLTSSNYDD+ KK TGGRNGYGAKL NIFST+F +
Sbjct: 60   NNGKGIPVVEHKVEKMYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTV 119

Query: 178  ETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVAL 237
            ETA  +  K +KQ + +NMG+  E  + K   G+++T ++F+PDL+KF M  L+ D+VAL
Sbjct: 120  ETACREYKKMFKQTWMDNMGRAGEMEL-KPFNGEDYTCITFQPDLSKFKMQSLDKDIVAL 178

Query: 238  MKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERW 289
            M +R  D+AG   K VKV LNG+++PVK F  YVDMY K         +   HE+VN RW
Sbjct: 179  MVRRAYDIAGST-KDVKVFLNGNKLPVKGFRSYVDMYLKDKLDETGNPLKVVHEQVNHRW 237

Query: 290  EICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVK 348
            E+C+T+SE  FQQ+SFVN IAT KGG HVDYVA+Q+   ++ VV KKNK    VKAH VK
Sbjct: 238  EVCLTMSEKGFQQISFVNSIATSKGGRHVDYVADQIVTKLVDVVKKKNKGGVAVKAHQVK 297

Query: 349  NHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWAN 408
            NH+W+FVNALI+NP FDSQTKE +TL+  SFGS C LSE+F+K      GIVE++L+W  
Sbjct: 298  NHMWIFVNALIENPTFDSQTKENMTLQPKSFGSTCHLSEKFIKAAIG-CGIVESILNWVK 356

Query: 409  FKQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
            FK    L KK    K   ++GI KL+DAN AGGRNS +CTLILTEGDSAK LA++GL VV
Sbjct: 357  FKAQVQLNKKCSAVKHNRIKGIPKLDDANDAGGRNSTECTLILTEGDSAKTLAVSGLGVV 416

Query: 468  GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHL 524
            GRDR+GVFPLRGK+LNVREAS  Q++ N+EI NI KI+GL+    Y   +++K+LRYG +
Sbjct: 417  GRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYEDEDSLKTLRYGKI 476

Query: 525  MIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIP 584
            M                                 D DGSHIKGLLINFIH  WPSLL+  
Sbjct: 477  MXXX----------------------------XXDQDGSHIKGLLINFIHHNWPSLLR-H 507

Query: 585  SFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGK 644
             FL EFITPIVK + KN + ++FYS+P++E WK S   +   W +KYYKGLGTSTSKE K
Sbjct: 508  RFLEEFITPIVKVS-KNKQEMAFYSLPEFEEWKSSTP-HHKKWKVKYYKGLGTSTSKEAK 565

Query: 645  EYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHL 693
            EYF ++  H+  F +   +D  AI LAFSKK+I+ RK+WL  F            P ++L
Sbjct: 566  EYFADMKRHRIQFKYCGPEDDAAISLAFSKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYL 625

Query: 694  -DQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVA 752
              Q   Y+ Y+DF+NKELILFS +D +RSIPSMVDGLKPGQRK+LF  FKRN  +E KVA
Sbjct: 626  YGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCFKRNDKREVKVA 685

Query: 753  QFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARY 812
            Q +G V+E S+YHHGE SL  TI+ +AQ+FVGSNN+NLLQP GQFGTR  GGKD+AS RY
Sbjct: 686  QLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRLHGGKDSASPRY 745

Query: 813  IFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIP 872
            IFT LS +TR LFP  DD  L +L +D Q++EP WY+PIIP VL+NG+EGIGTGWS  IP
Sbjct: 746  IFTMLSSLTRLLFPPKDDHTLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWSCKIP 805

Query: 873  NYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTL 932
            N++ R++V N+RRL++GE   PM P Y+ F GTIE+ A  +    Y ++G +  +N TT+
Sbjct: 806  NFDVREVVNNIRRLMDGEEPLPMLPSYKNFKGTIEELAPNQ----YVISGEVAILNSTTI 861

Query: 933  RIKELPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTK 988
             I ELP+R WTQ Y+E  LE ++   ++    I  +R+Y  DTTV F V ++EE +   +
Sbjct: 862  EISELPVRTWTQTYKEQVLEPMLNGTEKTPPLITDYREYHTDTTVKFVVKMTEEKLAEAE 921

Query: 989  QEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENL 1048
            + GL K FKL T+++ ++M LFD  G +KKYDT   IL +FF +RL++Y  RK+  L  L
Sbjct: 922  RVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTVLDILRDFFELRLKYYGLRKEWLLGML 981

Query: 1049 ELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP------KNSKSIEAV 1102
              E  KL N+ RFIL  ++G+I++ N+ + +L+  L Q+G+   P         K  +  
Sbjct: 982  GAESAKLNNQARFILEKIDGKIIIENKPKKELIKVLIQRGYDSDPVKAWKEAQQKVPDEE 1041

Query: 1103 VAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
                +D  +ESE++  V +   +  ++YLL M +  LT EK   L   R++  +E+D L+
Sbjct: 1042 ENEESDNEKESEKSDSVTDSGPT--FNYLLDMPLWYLTKEKKDELCRLRNEKEQELDTLK 1099

Query: 1163 KATPESLWVKDLDALDMQLDELDKSDARAEE 1193
            + +P  LW +DL     +L+ ++  + + E+
Sbjct: 1100 RKSPSDLWKEDLATFIEELEAVEAKEKQDEQ 1130


>gi|195580167|ref|XP_002079927.1| Top2 [Drosophila simulans]
 gi|194191936|gb|EDX05512.1| Top2 [Drosophila simulans]
          Length = 1133

 Score = 1118 bits (2892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 570/1103 (51%), Positives = 765/1103 (69%), Gaps = 78/1103 (7%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE+MYQKKSQLEHILLRPD+YIGS+E   + +W+Y+     M+ + IS+VPGLYKIFDE
Sbjct: 9    SIEQMYQKKSQLEHILLRPDSYIGSVEFTKELMWVYDNSQNRMVQKEISFVPGLYKIFDE 68

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M+ +K+ ID E +++SV N+G G+PV +H+E+ +YVP +IFGHLLT
Sbjct: 69   ILVNAADNKQRDKSMNTIKIDIDPERNIVSVWNNGQGIPVTMHKEQKMYVPTMIFGHLLT 128

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNY+D+ KK TGGRNGYGAKL NIFST F +ETA  +  K +KQ + NNMGK S+  I 
Sbjct: 129  SSNYNDDEKKVTGGRNGYGAKLCNIFSTSFTVETATKEYRKSFKQTWGNNMGKASDVQI- 187

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G ++T+++F PDLAKF M  L++D+VALM +R  D+A    K V V LNG+++ V+
Sbjct: 188  KDFNGTDYTRITFSPDLAKFKMDRLDEDIVALMSRRAYDVAAS-SKGVSVFLNGNKLAVR 246

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            +F +Y+D++ KS        +   HE  NERWE+    S+  FQQVSFVN IAT KGG H
Sbjct: 247  NFKDYIDLHIKSTDDDSGPPIKIVHEVANERWEVACCPSDRGFQQVSFVNSIATYKGGRH 306

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD+V + +   ++ V+ KKNK   N+K   V+NHLWVFVN LI+NP FDSQTKE +TL+Q
Sbjct: 307  VDHVVDNLIKQLLEVLKKKNKGGINIKPFQVRNHLWVFVNCLIENPTFDSQTKENMTLQQ 366

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
              FGSKC LS++F+  ++ KSGIVE++L+WA FK   D+ K  G K+  ++GI KLEDAN
Sbjct: 367  KGFGSKCTLSDKFINNMS-KSGIVESVLAWAKFKAQNDIAKTGGRKSSKIKGIPKLEDAN 425

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
             AGG+NS  CTLILTEGDSAK+LA++GL V+GRD +GVFPLRGKLLNVREA+  Q+  N+
Sbjct: 426  EAGGKNSINCTLILTEGDSAKSLAVSGLGVIGRDLYGVFPLRGKLLNVREANYKQLSENA 485

Query: 497  EIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            E+ N+ KI+GL+   +Y   +++K+LRYG +MIMTDQ                       
Sbjct: 486  EVNNLCKIIGLQYKKKYLTEDDLKTLRYGKVMIMTDQ----------------------- 522

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
                 D DGSHIKGLLINFIH+ WP LL++P FL EFITPIVKAT K  + LSFYS+P++
Sbjct: 523  -----DQDGSHIKGLLINFIHTNWPELLRLP-FLEEFITPIVKATKKKEE-LSFYSLPEF 575

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
            E WK     N  +++IKYYKGLGTSTSKE KEYFQ++  H+  F ++   D E+I +AFS
Sbjct: 576  EEWKNDTA-NHHTYNIKYYKGLGTSTSKEAKEYFQDMQRHRILFKYDGSVDDESIIMAFS 634

Query: 674  KKKIEARKKWLLQFEPGNHLDQ---------KEKY--------IKYSDFVNKELILFSMA 716
            KK IE+RK WL      NH+D+          E+Y        I Y+DF+N EL+LFS A
Sbjct: 635  KKHIESRKVWLT-----NHMDEVKRRKELGLPERYLYTKGTKSITYADFINLELVLFSNA 689

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D +RSIPS+VDGLKPGQRK++F  FKRN  +E KVAQ SG V+E SAYHHGE SL  TI+
Sbjct: 690  DNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIV 749

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQ+FVG+NNINLL+P GQFGTR  GGKD ASARYIFT +SP+TR ++   DD LLDY 
Sbjct: 750  NLAQNFVGANNINLLEPRGQFGTRLTGGKDCASARYIFTLMSPLTRLIYHPLDDPLLDYQ 809

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +DGQ+IEP WY+PIIP VLVNG+EGIGTGWS+ I NYNPR+I+ N+R+++NG+    MH
Sbjct: 810  VDDGQKIEPLWYLPIIPMVLVNGAEGIGTGWSTKISNYNPREIMNNLRKMINGQEPVVMH 869

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIID 955
            PWY+ F G IE  +       Y  TG ++ ++   L I ELP+  WTQ+Y+E  LE++ +
Sbjct: 870  PWYKNFLGRIEYVSDGR----YVQTGNLQILHGNRLEISELPVGVWTQNYKENVLEALSN 925

Query: 956  QND---SFIRGFRQYSDDTTVDFEVFLS--EESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
              +   + +  +++Y  DTTV F +  +  E   +R ++ G  + FKLTTT+ST+ MH F
Sbjct: 926  GTEKVKAVVSEYKEYHTDTTVRFVISFAPGEFERIRAEEGGFHRVFKLTTTLSTNQMHAF 985

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D    ++++ T   IL+EF+ +R E+Y +R+   +  L  +  +L ++ RFIL     ++
Sbjct: 986  DQNNCLRRFPTAIDILKEFYKLRREYYARRRDFLVGQLTAQADRLSDQARFILEKCEKKL 1045

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP 1093
            VV N++R  +  EL ++G+ P P
Sbjct: 1046 VVENKQRKAMCDELLKRGYRPDP 1068


>gi|254580647|ref|XP_002496309.1| ZYRO0C15422p [Zygosaccharomyces rouxii]
 gi|238939200|emb|CAR27376.1| ZYRO0C15422p [Zygosaccharomyces rouxii]
          Length = 1427

 Score = 1118 bits (2891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1202 (48%), Positives = 776/1202 (64%), Gaps = 68/1202 (5%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T  NK+  E YQK +QLEHIL RPDTYIGS+E      WIY+EES +M+ + +S VPGL+
Sbjct: 2    TVDNKSASERYQKITQLEHILKRPDTYIGSVEVQESHQWIYDEESDSMVEKEVSIVPGLF 61

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADNK RDP M  ++V ID E + I V N G G+P+EIH +E +Y+PELIF
Sbjct: 62   KIFDEILVNAADNKVRDPSMKKIEVNIDSEANSIDVKNDGKGIPIEIHNKENIYIPELIF 121

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            GHLLTSSNYDD+ KK TGGRNG+GAKL NIFS EFI+ETAD     KY Q + NNMG   
Sbjct: 122  GHLLTSSNYDDDEKKVTGGRNGFGAKLCNIFSVEFIVETADPGSGNKYVQRWENNMGVCH 181

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
             P I+  K+G ++TK+SFKPDL +FNM  L++D + +M++RV D+ G + + + V LNG 
Sbjct: 182  PPKITSYKKGPSYTKISFKPDLKRFNMETLDNDTLGVMRRRVYDVNGSV-RDINVYLNGK 240

Query: 261  RVPVKSFAEYVDMYPKSVTR-------------------FHERVNERWEICVTLSEGQFQ 301
             + +K+F  YV++Y KS+ R                    +ERVN+ WEI +  S+  FQ
Sbjct: 241  SLKIKTFKNYVELYTKSLERKRIAEGLAPEGSDGKSPPILYERVNDCWEIALATSDMSFQ 300

Query: 302  QVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDN 361
            Q+SFVN IAT  GGTHV+Y+++Q+   +  ++ K+ K   VKAH VKN +++F+N L++N
Sbjct: 301  QISFVNSIATTTGGTHVNYISDQIVRKITEMLRKQKKT--VKAHQVKNLMFLFINCLVEN 358

Query: 362  PAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT 421
            PAF SQTKE LT R   FGS+CE+S EF+KK+  KSG+   +L  A       LKK+DGT
Sbjct: 359  PAFSSQTKEQLTTRVKDFGSQCEISPEFIKKIM-KSGLEAKILDLATENAHATLKKSDGT 417

Query: 422  KTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKL 481
            +   +    KLEDAN AG R   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+
Sbjct: 418  RKNRITDYPKLEDANKAGTREGHKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKM 477

Query: 482  LNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLW 541
            LNVREA+ +Q+  N+EI  IKKI+GL+    Y + K+LRYGHLMIMTDQ           
Sbjct: 478  LNVREATVDQIQKNAEIQAIKKIMGLQHRKRYEDTKTLRYGHLMIMTDQ----------- 526

Query: 542  FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT--N 599
                             DHDGSHIKGL+INF+ S +P LL IP FLVEFITPIVK T   
Sbjct: 527  -----------------DHDGSHIKGLIINFLDSSFPGLLNIPGFLVEFITPIVKVTITK 569

Query: 600  KNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
               +V+SFY+MPDYE W++    +   W  KYYKGLGTS+ +E ++YF ++  H K F  
Sbjct: 570  PRREVISFYNMPDYEKWRDE-ESHRYKWKQKYYKGLGTSSGQEARQYFSDLDRHLKRFHA 628

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
              + + + I+LAFSKKK + RK+WL Q+EPG  LD +   I  SDF+NKELILFS+AD  
Sbjct: 629  LQEGEQDLIDLAFSKKKADDRKEWLRQYEPGTVLDPRLTEIPISDFINKELILFSLADNI 688

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIP+++DG KPGQRK+++ SFKRN   E K++  + YV+E + YHHG  SLA TI+G+A
Sbjct: 689  RSIPNVLDGFKPGQRKVIYGSFKRNITSEIKISTLANYVAEQTDYHHGPDSLAQTIIGLA 748

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q FVGSNNI +L P G FGTR  GGKDAA+ RYI T L+ ITR +F   DD L +YL ED
Sbjct: 749  QSFVGSNNIYVLNPIGSFGTRATGGKDAAAPRYISTELTKITRKIFHPFDDPLYNYLQED 808

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
               +EP WY+PI+P +L+NG EGIGTGWS+ IP +NP DIV N+R L+NGE +E MHPW+
Sbjct: 809  ENTVEPEWYLPILPMLLINGGEGIGTGWSTNIPPFNPLDIVRNLRHLMNGEELEEMHPWF 868

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS 959
            RG+ GTIEK   +     Y V G IE+     L I ELP R WT   +E L   +  ND 
Sbjct: 869  RGWTGTIEKIGPQR----YRVYGRIEQTGPCALEITELPARMWTSTLKEHLLLGLGGNDK 924

Query: 960  FIRGFRQYSDD--TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIK 1017
                 +   +     + F V L++E M +T+  G  ++FKL +TIS +NM  FD  G IK
Sbjct: 925  MKPWIKDLEEQHGNGIRFVVRLTQEEMDKTRVMGFYERFKLISTISLNNMVAFDPHGKIK 984

Query: 1018 KYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
            KY+   +IL EF+++RLE+Y+KRK    E L+ E+ KL  +++FI  ++ GE+ + NR R
Sbjct: 985  KYENVSEILTEFYYVRLEYYQKRKDYMSERLQWEVEKLSFQIKFIKLIIEGEMSITNRPR 1044

Query: 1078 TDLLLELRQKGFTPFPKNSK------SIEAVVAGATDETEESEENPEVVNGVQSI--DYD 1129
              ++ +L +KGF  F K  K      S +       ++ E+ EE   V+NG + +   ++
Sbjct: 1045 KQIIADLEEKGFPRFNKEGKPSYMKISEKDTEEEEGEKGEDEEEVEGVINGPEEVYGSFE 1104

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            YLL M I  LT E+ + LL  +     E++ L + + + LW  DLD      D+    D 
Sbjct: 1105 YLLGMKIWALTRERYEKLLKQKQDRQVELETLLQYSAKDLWSMDLDEFVTAYDKFMAEDE 1164

Query: 1190 RA 1191
             A
Sbjct: 1165 EA 1166


>gi|223634721|sp|Q01879.3|TOP2_PICGU RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|190347620|gb|EDK39928.2| hypothetical protein PGUG_04026 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1400

 Score = 1118 bits (2891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/1329 (45%), Positives = 838/1329 (63%), Gaps = 119/1329 (8%)

Query: 6    RLPLTTSNNANVVGPTAP-NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEE 64
            ++PL  S N     P+AP      + YQK SQLEHIL RPDTYIGS+EK    +W ++  
Sbjct: 34   KVPLRDSTNT-TAQPSAPATGDASDQYQKLSQLEHILKRPDTYIGSVEKTGVEMWSFDAA 92

Query: 65   SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
            +++MI++ +  VPGLYKIFDEILVNAADNK RDP M  +KV ID E++ ISV N G G+P
Sbjct: 93   TESMIYKEVHIVPGLYKIFDEILVNAADNKIRDPSMRNIKVNIDAENNTISVMNDGKGIP 152

Query: 125  VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
            +EIH++E +Y+PELIFG+LLTSSNYDD+ KK TGGRNGYGAKL NIFSTEF++ETAD   
Sbjct: 153  IEIHKKEKIYIPELIFGNLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFVLETADLNT 212

Query: 185  LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
             + YKQ +TNNM   ++P I+K K    +TKV+FKPDL+KF+M  L+DD+++++++RV D
Sbjct: 213  SQVYKQTWTNNMANLTKPKITKLKSKKEYTKVTFKPDLSKFHMEMLDDDILSVLRRRVYD 272

Query: 245  LAGCLGKSVKVELNGHRVPVKSFAEYVDMY-------------PKSVTR-----FHERVN 286
            L G + K   + LN  ++ +++F  YV+MY             P+  TR      HE  N
Sbjct: 273  LCGTV-KDCNIYLNDKKLSIRNFKSYVEMYVNAIRERSPDPVAPEGETRNYSTIVHEVFN 331

Query: 287  ERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA---NVK 343
            +RWE+   +S+G F QVSFVN IAT  GGTHV YV++Q+   ++  + KK K     N+K
Sbjct: 332  DRWEVAFAVSDGSFNQVSFVNSIATTSGGTHVKYVSDQIITKLIDALTKKEKGKKKLNIK 391

Query: 344  AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE----LSEEFLKKVTAKSGI 399
               V+N+++VF+N LI+NPAF SQTKE LT R + FG K      +S++F+ K+  K+ I
Sbjct: 392  PQEVRNNMFVFINCLIENPAFTSQTKEQLTTRVAQFGGKPSEKIVISDQFIAKI-LKTSI 450

Query: 400  VETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKAL 459
             + + +  N  + K++ K DG++   ++   KL DAN AG +   +CTLILTEGDSA  L
Sbjct: 451  ADKIRTIVNANEDKEMSKADGSRKSRIKNQVKLVDANKAGTKEGYKCTLILTEGDSAMPL 510

Query: 460  AMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVK 517
            A+AGL+VVGRD +G FPLRGKLLNVREAS  QV  N+EI +IK+I+GL+    Y   N+K
Sbjct: 511  AVAGLTVVGRDYYGCFPLRGKLLNVREASIEQVSKNAEINSIKQIMGLQHKKRYTPENIK 570

Query: 518  SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFW 577
            SLRYGH+MIMTD                            QD DGSHIKGL+INF+ + +
Sbjct: 571  SLRYGHIMIMTD----------------------------QDQDGSHIKGLIINFLETSF 602

Query: 578  PSLLKIPSFLVEFITPIVKAT---NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKG 634
            P LL+IP FL+EFITPIVK T     N +V+ FY+MP++E W+E+  G    W  KY+KG
Sbjct: 603  PGLLEIPGFLLEFITPIVKVTITGRGNHRVIPFYNMPEFEKWRET-EGTTCKWKHKYFKG 661

Query: 635  LGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLD 694
            LGTS   EG+EYF  +  H K F    D D + I++AFSKKK + RK WL  F PG HLD
Sbjct: 662  LGTSLESEGREYFAALDRHMKSFHALQDGDSQYIDMAFSKKKADERKDWLQAFRPGTHLD 721

Query: 695  QKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQF 754
             + + I  S+F+NKELILFSMAD  RSIPS++DG KPGQRK+L+  FKRN   E KVAQ 
Sbjct: 722  PQIREIPISEFINKELILFSMADNVRSIPSILDGFKPGQRKVLYGCFKRNLRSEIKVAQL 781

Query: 755  SGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIF 814
             GY+SEH+ YHHGE SLA TI+G+AQ+FVG+NN+NLLQP G FG+R  GGKD ++ RYI 
Sbjct: 782  VGYISEHTGYHHGEGSLAQTIVGLAQNFVGANNLNLLQPIGLFGSRAAGGKDFSAVRYIH 841

Query: 815  TRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNY 874
            T ++ +TR +F   DD L  Y+ +D Q +EP  Y+PIIP +LVNG+EGIGTGWS+ IP++
Sbjct: 842  TNITDLTRVIFNPLDDDLYTYVQDDAQTVEPEAYLPIIPMLLVNGAEGIGTGWSTNIPSF 901

Query: 875  NPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRI 934
            NP DIVAN+RR++NGE    M PW++G+ G +E+ + ++    Y V+G IE+V++ T+ I
Sbjct: 902  NPVDIVANIRRMMNGEEPVDMTPWFKGWEGDLERISPEK----YKVSGKIEQVDDDTVEI 957

Query: 935  KELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLK 994
             E+PI+ WT   +EFL + +  +  +I+   +      + F V LS+E M ++ + GLL+
Sbjct: 958  TEIPIKTWTNSVKEFLLAGLGNDKPWIKDMEE-QHGINIRFVVRLSKEEMDKSLRMGLLE 1016

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
            +FKL ++IS SNM  FD +G IKKY +  +IL++++  RLE Y++RK +  EN + +L +
Sbjct: 1017 RFKLISSISLSNMVAFDPQGRIKKYSSANEILKDYYWARLELYQRRKDMMAENFQNQLTR 1076

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSI--EAVVA-------- 1104
            L  + RFI  ++  ++ + N+KR++++ +L++  FT F KN K +  E +V         
Sbjct: 1077 LSEQARFIKLIIEKKLTIANKKRSEMVDDLKKLKFTRFNKNGKPVHDEPLVEAEELAEEE 1136

Query: 1105 ------------GATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRD 1152
                        G     +ES+  PE         YDYLL MAI +LT E+ + LL  RD
Sbjct: 1137 EEAAGDISQLNLGLVAPEDESQYKPETTYS----QYDYLLGMAIWSLTRERYEKLLRQRD 1192

Query: 1153 KLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVA 1212
            +  EE+++L K + + LW  DLD   +  +E  ++D  A               GP    
Sbjct: 1193 EKQEELNELLKKSAKDLWNSDLDDFLVGWEEFLRADIEAR-----------NSFGPT--- 1238

Query: 1213 KRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKA---PAEKLDDDEEDEV 1269
              A  + RK  +KS  +   +        TK   PK      KA   PA+ +  +E ++ 
Sbjct: 1239 --AKTSTRKRARKSTKSEPAQKK------TKSSTPKASTPTIKAEATPAQPVVKEETNKQ 1290

Query: 1270 PDLKQRLAK 1278
            PDL    +K
Sbjct: 1291 PDLLSFFSK 1299


>gi|365987970|ref|XP_003670816.1| hypothetical protein NDAI_0F02550 [Naumovozyma dairenensis CBS 421]
 gi|343769587|emb|CCD25573.1| hypothetical protein NDAI_0F02550 [Naumovozyma dairenensis CBS 421]
          Length = 1420

 Score = 1118 bits (2891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/1243 (47%), Positives = 804/1243 (64%), Gaps = 86/1243 (6%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T   KT  E YQK SQLEHIL RPDTYIGS+E   Q  WIY++E+  M+ + +  VPGL+
Sbjct: 2    TTKEKTASERYQKISQLEHILKRPDTYIGSVEIQEQEQWIYDDETDCMMEKHVKIVPGLF 61

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEI+VNAADNK RDP M  + V I  E +LI V N G G+P+EIHQ+E +++PELIF
Sbjct: 62   KIFDEIVVNAADNKVRDPTMKRIDVNIRPEENLIEVKNDGKGIPIEIHQKEKIHIPELIF 121

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            GHLLTSSNYDD  KK TGGRNGYGAKL NIFSTEFI+ETAD    KKY Q + NNM    
Sbjct: 122  GHLLTSSNYDDKEKKVTGGRNGYGAKLCNIFSTEFILETADPILGKKYVQKWENNMNTCH 181

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
             P I+   +G ++TKVSFKPDL++FNM  L+ D++ +M++RV D+ G +  +V V L+G 
Sbjct: 182  PPKITPYSKGQSYTKVSFKPDLSRFNMEELDKDILGVMRRRVYDIGGSVS-NVNVYLDGK 240

Query: 261  RVPVKSFAEYVDMYPKSVTR-------------------FHERVNERWEICVTLSEGQFQ 301
             + +++F  YV++Y  S  +                    +ERVNE WE+   +S+  FQ
Sbjct: 241  SLKIRNFKNYVELYLNSSEKSRQLDNGEDASIQSNTPPILYERVNESWEVAFAVSDISFQ 300

Query: 302  QVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDN 361
            Q+SFVN IAT  GGTHV+Y+ +Q+   V  ++ KK K  N+K   +KN++++F+N LI N
Sbjct: 301  QISFVNSIATTTGGTHVNYITDQIVRKVSDILKKKKK-KNIKPFQIKNNMFIFINCLIQN 359

Query: 362  PAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT 421
            PAF SQTKE +T R   FGSKC +S++F+ K+  K+     +    +  ++  LKK+DGT
Sbjct: 360  PAFTSQTKEQMTTRVKDFGSKCLISDDFVNKI-MKTDFATKISEIVDENETNALKKSDGT 418

Query: 422  KTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKL 481
            +   +    KLEDAN AG ++  +CTLILTEGDSA +LA+AGL+VVGRD +G +PLRGK+
Sbjct: 419  RKSRITDYPKLEDANKAGTKDGYKCTLILTEGDSALSLAVAGLAVVGRDFYGCYPLRGKM 478

Query: 482  LNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLW 541
            LNVREAS++Q+L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTDQ           
Sbjct: 479  LNVREASADQILKNAEIQAIKKIMGLQHKKKYEDTKSLRYGHLMIMTDQ----------- 527

Query: 542  FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT--N 599
                             DHDGSHIKGL+INF+ S +P LL IP FLVEFITPI+K T   
Sbjct: 528  -----------------DHDGSHIKGLIINFLESSFPGLLDIPGFLVEFITPIIKVTVTK 570

Query: 600  KNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
             + +V++FY+MPDYE W+     N + W  KYYKGLGTS+ +E +EYF+++  H K F  
Sbjct: 571  PSRQVIAFYNMPDYEQWRAEEAQNYT-WKQKYYKGLGTSSGQEVREYFKDLDKHLKTFHA 629

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
                D + I+LAFSKKK + RK+WL  +EPG  LD K   I  SDF+NKELILFS+AD  
Sbjct: 630  LQGHDKDLIDLAFSKKKADDRKEWLRLYEPGTVLDPKISEIPISDFINKELILFSLADNI 689

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS++DG KPGQRK+LF  FKRN   E KVAQ + YV+E SAYHHGEQSLA TI+G+A
Sbjct: 690  RSIPSVLDGFKPGQRKVLFGCFKRNLRSEIKVAQLAPYVAECSAYHHGEQSLAMTIIGLA 749

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLL+PNG FGTR  GGKDAA+ARYIFT LS ITR +F   DD L  Y+ +D
Sbjct: 750  QNFVGSNNINLLKPNGAFGTRATGGKDAAAARYIFTELSKITRKIFHPSDDPLFKYVQDD 809

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
               +EP WY+P++P +LVNG+EGIGTGWS+ IP +NP DIV N+R L+NGE +E M PW+
Sbjct: 810  ETTVEPEWYLPVLPMILVNGAEGIGTGWSTNIPPFNPLDIVKNLRHLMNGEELENMMPWF 869

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND- 958
            +G+GG++EK   +     Y + G IE++   TL I ELP + WT   +E+L   I  N+ 
Sbjct: 870  KGWGGSVEKVEHQR----YRMYGRIEQIGPNTLEITELPAKTWTSTIKEYLLLGISGNER 925

Query: 959  --SFIRGF-RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
               +I+    Q+ +D  + F + L+ E M +T++ G  ++F+L + IS  NM  FD +G 
Sbjct: 926  TKPWIKDMEEQHGND--IKFIIKLTPEEMEKTRKIGFYERFRLISPISLMNMVAFDPRGK 983

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            IKKY++   IL EFF++RLE+Y+KRK    E L+ E+ KL  +V+FI  ++  E++V N+
Sbjct: 984  IKKYESVFDILTEFFYVRLEYYQKRKDFMSERLQWEVEKLSFQVKFIKMIIERELIVTNK 1043

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEE-------------NPEVVNG 1122
             R +++ EL + GF    K+ K     +A   +E  E +E             +  ++NG
Sbjct: 1044 PRKNIIKELEEFGFPRINKDGKPYYGSIAQKVEELIEEDEEAEEIDNDEDVLTDDAIING 1103

Query: 1123 VQSI--DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQ 1180
             +     ++YLL M I +LT E+ + LL  + +   E++DL K +   LW  DLD     
Sbjct: 1104 PEEAYGTFEYLLGMRIWSLTKERYEQLLKQKKEREIELEDLLKLSASDLWNIDLDDFMKS 1163

Query: 1181 LDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKND 1223
             +E    D   EE R     NG+  +G K   KR  KNA  +D
Sbjct: 1164 YEEFLVLD---EEYR-----NGSEASGSKTKGKRKRKNADSDD 1198


>gi|444320547|ref|XP_004180930.1| hypothetical protein TBLA_0E03570 [Tetrapisispora blattae CBS 6284]
 gi|387513973|emb|CCH61411.1| hypothetical protein TBLA_0E03570 [Tetrapisispora blattae CBS 6284]
          Length = 1368

 Score = 1117 bits (2890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/1202 (48%), Positives = 795/1202 (66%), Gaps = 76/1202 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K+  + YQK SQLEHIL RPDTYIGS+E   Q  WIY+E +  M+ +T++ VPGL+KIFD
Sbjct: 5    KSASDRYQKISQLEHILKRPDTYIGSVEIQEQQQWIYDETTDCMLEKTVNIVPGLFKIFD 64

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP M  ++V I+   +LI V N G+G+P+EIH++E +Y+PELIFGHLL
Sbjct: 65   EILVNAADNKVRDPSMKKIEVNINPLENLIEVKNDGNGIPIEIHKKEKIYIPELIFGHLL 124

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ KK TGGRNGYGAKL NIFSTEF +ETAD K  KKY Q + NNM    +P I
Sbjct: 125  TSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFTLETADSKTGKKYIQKWENNMNVCHDPKI 184

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +  K+  ++TKVSFKPDL +F M +L++D++ + ++RV D+ G + + + V LNG  + +
Sbjct: 185  TTYKKIQSYTKVSFKPDLKRFGMENLDEDILGVYRRRVYDINGSV-RDINVYLNGKSLKI 243

Query: 265  KSFAEYVDMYPKSV------------------TRFHERVNERWEICVTLSEGQFQQVSFV 306
            ++F  YV++Y KS+                  T  +E++N+RWEI   +S+  FQQ+SFV
Sbjct: 244  RNFKNYVELYLKSLEKKRQLENGEDSTSQQSPTILYEKLNDRWEIAFAVSDISFQQISFV 303

Query: 307  NGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDS 366
            N IAT  GGTHV+Y+ +Q+   V  +   K K  N+K   +KN++++F+N LI+NPAF S
Sbjct: 304  NSIATTSGGTHVNYIVDQIVRKVSDL--LKKKKKNIKPFQIKNNIFIFINCLIENPAFTS 361

Query: 367  QTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV 426
            QTKE LT R   FGS+C++S E++ K+  K+ +   +   A+   +  LKK+DG++   +
Sbjct: 362  QTKEQLTTRVKDFGSRCDISPEYINKI-MKTDLATKIFEIADENANNALKKSDGSRKSRI 420

Query: 427  RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
                KLEDAN AG +   +CTLILTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVRE
Sbjct: 421  TEYPKLEDANKAGTKEGHKCTLILTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVRE 480

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIF 546
            AS++Q+L N+EI  IKKI+GL+    Y +  SLRYGHLMIMTDQ                
Sbjct: 481  ASADQILKNAEIQAIKKIMGLQHRKRYEDTSSLRYGHLMIMTDQ---------------- 524

Query: 547  AWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT--NKNGKV 604
                        DHDGSHIKGL+INF+ S +P LL IP FLVEFITPI+K T    + + 
Sbjct: 525  ------------DHDGSHIKGLIINFLESSFPGLLDIPGFLVEFITPIIKVTITKPSRQT 572

Query: 605  LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD 664
            + FY+MPDYE W+E    +  +W  KYYKGLGTST +E +EYF ++  H K F   +  D
Sbjct: 573  IVFYNMPDYEKWREE-ESHQYTWKQKYYKGLGTSTGQEMREYFSDLDKHLKQFHALEGND 631

Query: 665  GEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPS 724
             + I+LAFSKKK + RK+WL Q EPG  LD   K I  SDF+NKELILFS+AD  RSIP+
Sbjct: 632  KDLIDLAFSKKKADDRKEWLRQHEPGTVLDPTIKEIPISDFINKELILFSLADNIRSIPN 691

Query: 725  MVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVG 784
            ++DG KPGQRK++F  FKRN   E KVAQ + YV E +AYHHGEQSLA TI+GMAQ+FVG
Sbjct: 692  VLDGFKPGQRKVMFGCFKRNLRSEIKVAQLAPYVGECTAYHHGEQSLAQTIIGMAQNFVG 751

Query: 785  SNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIE 844
            +NNI LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F  +DD L +Y+ ED   +E
Sbjct: 752  TNNIYLLIPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFNPNDDPLYNYIQEDETTVE 811

Query: 845  PTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGG 904
            P WY+P++PT+LVNGSEGIGTGWS+ IP++NP DI+ N++ L+N E ME MHPW+RG+ G
Sbjct: 812  PQWYLPVLPTLLVNGSEGIGTGWSTNIPSFNPLDIIKNIKHLMNNEEMEEMHPWFRGWTG 871

Query: 905  TIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFL---ESIIDQNDSFI 961
            TIEK   +     Y + G IE++   TL I ELP + WT   +E+L    S  ++  ++I
Sbjct: 872  TIEKIGYQR----YRMYGRIEQIGPNTLEITELPAKVWTSTIKEYLLQGLSGTEKTKAWI 927

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDT 1021
            +   +      + F + L+ E M +T++ G  ++FKL + IS +NM  FD +G IKKY+ 
Sbjct: 928  KDMEE-QHGNFIKFIIKLTPEEMQKTRKIGFYERFKLISPISLNNMVAFDPQGRIKKYEN 986

Query: 1022 PEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLL 1081
            P++IL+EF+++RLE+Y+KRK    E L+ ++ KL  +V+FI  ++  E+VV+N  +  ++
Sbjct: 987  PQEILKEFYYVRLEYYQKRKDYMCEKLQWDVEKLSFQVKFIKMIIEKELVVSNIPKKQII 1046

Query: 1082 LELRQKGFTPFPKNSK--------SIEAVVA--GATDETEESEENPEVVNGVQSID---- 1127
             EL   GF    K+ K         IE ++   G ++E +  +EN + +N +   +    
Sbjct: 1047 KELETLGFPRINKDGKPHYGSIQEKIEELLEEDGTSEEEKVEQENNDELNEINGPEEEYG 1106

Query: 1128 -YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
             YDYLL M I +LT E+ + LL  + +   E++ L   TP+ LW  D+D      DE  K
Sbjct: 1107 TYDYLLGMKIWSLTKERYEKLLKQKQEKEVELETLLGLTPQDLWNNDIDEFVKGYDEFLK 1166

Query: 1187 SD 1188
             D
Sbjct: 1167 FD 1168


>gi|342186237|emb|CCC95723.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 1612

 Score = 1114 bits (2882), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1203 (47%), Positives = 798/1203 (66%), Gaps = 80/1203 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            +T+EE+YQKK+Q EHIL RPD YIG+IE  T+ +W+Y+E    M  +  ++ PGLYKIFD
Sbjct: 4    RTVEEVYQKKTQHEHILARPDMYIGTIEPVTEDMWVYDEADCVMKLQRCTWTPGLYKIFD 63

Query: 85   EILVNAADNKQRDPK-MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            EILVNAADNK RDP    A+KV ID E  +I V+N+G+G+PV+ H+E  ++VPE+IFGHL
Sbjct: 64   EILVNAADNKVRDPHGQTAIKVWIDTERGVIRVYNNGEGIPVQRHREHDLWVPEMIFGHL 123

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LTSSNYDD   K TGGRNG+GAKLTN+FST F +ET   +  KK+   + NNM +  EP 
Sbjct: 124  LTSSNYDDTEAKVTGGRNGFGAKLTNVFSTCFELETVHSRSRKKFFMRWRNNMLESEEPV 183

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            I+ C +G ++T V+F PD AKF +  L +D+  +MK+RV D+AGC  KS+   LNG ++P
Sbjct: 184  ITSC-DGPDYTMVTFYPDFAKFKLQGLSEDMALIMKRRVYDIAGCTEKSLSCYLNGGKIP 242

Query: 264  VKSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
             +SFAEYVD+YP    +     + RVN+RWE+CV +S   FQQVSFVN IAT +GGTHV 
Sbjct: 243  CRSFAEYVDLYPTMGEERRPGSYSRVNDRWEVCVRVSNIGFQQVSFVNSIATTRGGTHVK 302

Query: 320  YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
            YV  Q+   V     +K+K   VK H ++ H++VFVN LI+NP+FDSQTKETL   ++ F
Sbjct: 303  YVVEQIIAKVTEQAMRKSKT-EVKPHMIRPHMFVFVNCLIENPSFDSQTKETLNTPKTRF 361

Query: 380  GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK-KNDGTKTEDVRGISKLEDANLA 438
            GS C+L    +  V  KS IVE  +  AN K S+++  K   +  + V GI KL+DAN A
Sbjct: 362  GSVCDLPASLIDCVL-KSSIVERAVEMANSKLSQEMAMKLRNSNRKQVLGIPKLDDANEA 420

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            GG NS +CTLILTEGDSAKAL  AGLS+  RD FGVFPLRGK LNVR+AS  +V++ +E 
Sbjct: 421  GGENSHRCTLILTEGDSAKALCTAGLSLKDRDYFGVFPLRGKPLNVRDASIKKVMSCAEF 480

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
              I KI+GL    +Y +V+ LRYGHLMIM+DQ                            
Sbjct: 481  QAICKIMGLDVTQKYTSVEGLRYGHLMIMSDQ---------------------------- 512

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK---NGK--VLSFYSMPDY 613
            DHDGSHIKGL+IN IH++WP LLK+P FL +FITPI+KA  K   NG    +SF+SMPDY
Sbjct: 513  DHDGSHIKGLIINMIHNYWPDLLKVPGFLQQFITPIMKARKKSRGNGDEGAISFFSMPDY 572

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
              WK ++G N  ++ ++YYKGLGTST+KEG+EYF+NI  H+ +FV+ED +D + I +AF+
Sbjct: 573  FEWKNAVGDNIKNYELRYYKGLGTSTAKEGREYFENIDRHRLNFVYEDKKDDDDIIMAFA 632

Query: 674  KKKIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            K K++ RK+W+  F+   ++++   Y    + YS+FV+KELILFS+AD +RSIPS+VDGL
Sbjct: 633  KDKVDERKRWITDFKANTNINESMNYNVRNVTYSEFVHKELILFSVADCERSIPSVVDGL 692

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRKI+F +FKRN ++  KVAQ +GYVSEH+AYHHGEQSL  TI+G+AQD+VG+NNI 
Sbjct: 693  KPGQRKIMFSAFKRNLVRSIKVAQLAGYVSEHAAYHHGEQSLVQTIVGLAQDYVGANNIP 752

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL  +GQFGTR QGGKD A+ RYI TRL+ I R ++   DD ++DY ++DG  +EP +Y+
Sbjct: 753  LLHRDGQFGTRLQGGKDHAAGRYISTRLTNIARRIYHPSDDFVVDYKDDDGLSVEPFYYV 812

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            P+IP VLVNG+ GIGTG+++ IPNY+P D++ N+RRLL+G+ + PM PWY GF GTIE+ 
Sbjct: 813  PVIPMVLVNGTAGIGTGFATNIPNYSPLDVIDNLRRLLSGDDLRPMKPWYFGFTGTIEE- 871

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSD 969
              +E G  +  +G      +  + I ELPI  WT  Y++FLE +  +    +  +R+++ 
Sbjct: 872  --REKG-KFVSSGRYTVRPDGVVCITELPIGTWTSQYKKFLEDL--RKREIVVQYREHNT 926

Query: 970  DTTVDFEVFLSEESMMRTKQEGLLK-KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
            D TVDFEVF+  E + +   +G L+ K +L   I+ +N+  FD +G I  Y   E +L+E
Sbjct: 927  DVTVDFEVFIHPEVLQQWTNQGCLEDKLQLREYINATNIIAFDREGRITNYADAESVLKE 986

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ +RLE+Y +R+K  + +++  ++KL N +RF+  VVNG  VV  R   ++L +L+Q+G
Sbjct: 987  FYLVRLEYYARRQKFLVNHVDYTVVKLNNMIRFVNEVVNGTFVVTRRPMKEVLADLQQRG 1046

Query: 1089 FTPFPKNSKS--------------------IEAVVAG------ATDETEESEENPEVVNG 1122
            +TPFP   K                     +++++ G      A D    + E  +  + 
Sbjct: 1047 YTPFPPQQKKKVSSTTINDGNNLTVNDDRVVDSLIDGSYHFSCAVDNFFFNYEGCDCDDL 1106

Query: 1123 VQSI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL 1181
             +S  DYDYLL + +  LT E    LLA  +    + + + K +P  LW +DLD L  ++
Sbjct: 1107 KRSARDYDYLLGLRLWNLTAEMSARLLAQLEAARAKCETIAKCSPSDLWREDLDLLQPEV 1166

Query: 1182 DEL 1184
            ++L
Sbjct: 1167 EKL 1169


>gi|340521765|gb|EGR51999.1| predicted protein [Trichoderma reesei QM6a]
          Length = 1619

 Score = 1114 bits (2881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/1200 (48%), Positives = 779/1200 (64%), Gaps = 82/1200 (6%)

Query: 20   PTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGL 79
            P +  KT  E YQK +QLEHI+ RPDTYIGS+EK  Q +W+Y +E+K M +R I+YVPG 
Sbjct: 111  PASKKKTATETYQKLTQLEHIIKRPDTYIGSVEKTDQQMWVYNKETKQMEYRNITYVPGF 170

Query: 80   YKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELI 139
            YKIFDEILVNAADNKQRD  M+ +KV ID+E   ISV N+G G+P+ +H++E VY+PELI
Sbjct: 171  YKIFDEILVNAADNKQRDSSMNMMKVTIDRESGEISVENNGKGIPIVMHEKERVYIPELI 230

Query: 140  FGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
            FGHLL  SN+DD  KKT GGRNGYGAKL N+FSTEF +E  D +  K+YKQ +TNNM   
Sbjct: 231  FGHLLAGSNFDDTEKKTVGGRNGYGAKLCNVFSTEFTLECQDSENGKRYKQQWTNNMQTM 290

Query: 200  SEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELN 258
             +  I+  K  D + +V+FKPD A+F M   + DD+ AL+ +RV D+AG + + VKV+LN
Sbjct: 291  HKAKITSNKSSD-FVRVTFKPDYARFGMEEGITDDLEALLYRRVYDMAGTM-RGVKVQLN 348

Query: 259  GHRVPVKSFAEYVDMYPKSVTRFHERVNE------------------RWEICVTLSEGQF 300
            G  + +K F  Y D+Y KS+    ER  E                  RWEI  T+S+G F
Sbjct: 349  GELIKIKDFKSYCDLYAKSIA--GERSMEEGGNPTCTVEIDKDKGHPRWEIGFTVSDGTF 406

Query: 301  QQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALID 360
            QQVSFVN IAT  GGTHV+Y+A+Q+  +++  V K  K   +K  +++NH+++FVN LID
Sbjct: 407  QQVSFVNSIATTSGGTHVNYIADQITAYLLKAVTKLKKGHGLKPAHLRNHIFIFVNCLID 466

Query: 361  NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG 420
            NPAF SQTKE +T + S FGSKC L ++FLKKV AKS  ++ ++ +A  K  K + K+DG
Sbjct: 467  NPAFTSQTKEQMTTKASQFGSKCVLGDDFLKKV-AKSDAIKNIMDFAERKADKMMAKSDG 525

Query: 421  TKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGK 480
             K   V   +KL +ANLAG R   +CTLILTEGDSAK LA++G +++  DR GVFPLRGK
Sbjct: 526  NKRSRVSN-AKLVEANLAGTRRGHECTLILTEGDSAKGLAVSGRAILDPDRIGVFPLRGK 584

Query: 481  LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLL 540
            LLNVR+AS +Q+  N EI NIK+ LGLK    Y + KSLRYGHLMIM DQ          
Sbjct: 585  LLNVRDASIDQITKNQEIQNIKQFLGLKHKQVYTDTKSLRYGHLMIMADQ---------- 634

Query: 541  WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--- 597
                              DHDGSHIKGLLINF+   +PSLL+IP F  EFITPIVK    
Sbjct: 635  ------------------DHDGSHIKGLLINFLQVQFPSLLQIPDFFREFITPIVKVWQG 676

Query: 598  --TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKK 655
                K  ++ SF++ P YE WK+  G   S W  KY KGLG+S++++ + YF N+  H K
Sbjct: 677  PNPKKPQRLKSFFTQPQYEEWKQERGSEISRWHYKYLKGLGSSSNEDAQVYFTNLDEHLK 736

Query: 656  DFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSM 715
            +F     ++ E  +LAFSKKK +ARK+WL  F PG +LD   K I YSDFVNKELILFSM
Sbjct: 737  EFSVMKPEEAEMFDLAFSKKKADARKEWLGNFVPGTYLDHSSKVITYSDFVNKELILFSM 796

Query: 716  ADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTI 775
            AD  RSIPSM+DGLKPGQRK+L+  FKRN +K+ KV + +GYVS  +AYHHGE SL  TI
Sbjct: 797  ADNIRSIPSMIDGLKPGQRKVLYACFKRNVVKDEKVVELAGYVSGLTAYHHGEASLQQTI 856

Query: 776  LGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDY 835
            +G+AQDFVGSNNIN+L+P+G FG+R  GG DAAS RY FTRLSP  R +F   DD  L +
Sbjct: 857  IGLAQDFVGSNNINVLEPSGNFGSRLAGGSDAASPRYTFTRLSPFARSIFSSLDDPNLKH 916

Query: 836  LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVR----RLLNGE- 890
              EDG+QIEP  Y PI+P VL+NG++GIGTGWS+ IPNY+P ++V N++    RL +G+ 
Sbjct: 917  QFEDGKQIEPEVYAPILPMVLINGADGIGTGWSTSIPNYHPLEVVKNLKRRMGRLEDGDD 976

Query: 891  ---MMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGII--EEVNETTLRIKELPIRRWTQD 945
                 E M PW+RG+ GT E          Y   GI    E N   + I ELPIR WT D
Sbjct: 977  EEKPFETMTPWFRGWKGTPEAAGPDR----YKFNGIAYQNEQNPNEVVITELPIRVWTDD 1032

Query: 946  YREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTIS 1003
            ++  LE II   D  S+I+ +++++D  TV FE+ + E+ M +  +EGLL++FKLT  ++
Sbjct: 1033 FKARLEKIISGVDGPSWIKDYKEFNDHKTVHFEIQVDEKHMPKVLEEGLLERFKLTKQVA 1092

Query: 1004 TSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFIL 1063
            TSN+  F++ G I+KY+  E ILEE++  RLE Y KRK   L   + +  KL+N+ RFI 
Sbjct: 1093 TSNLVAFNTNGQIRKYEKVEDILEEYYVYRLEMYLKRKNHWLAVYDADHRKLKNQARFIQ 1152

Query: 1064 GVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGV 1123
             +++G+++V  +++  L+ ELR + +  FP         V  A  +  E EE  +     
Sbjct: 1153 EIIDGDLIVGKKRKDVLVKELRDRKYEAFPP--------VKNANTKKSEEEEEDDEEGEE 1204

Query: 1124 QSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
             + DYDYLLSM I +LT E+++ L     +   E D+L   + + LW +DL A + + D+
Sbjct: 1205 SARDYDYLLSMPIWSLTAERLEKLKDAIRRKKAEYDELEAKSEKDLWCEDLAAFEAEWDK 1264


>gi|50291033|ref|XP_447949.1| hypothetical protein [Candida glabrata CBS 138]
 gi|51338747|sp|O93794.2|TOP2_CANGA RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|49527260|emb|CAG60900.1| unnamed protein product [Candida glabrata]
          Length = 1406

 Score = 1114 bits (2881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/1209 (47%), Positives = 793/1209 (65%), Gaps = 85/1209 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT  E YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI +T++ VPGL+KIFD
Sbjct: 5    KTASERYQKISQLEHILKRPDTYIGSVEIQEQEQWIYDEETDCMIDKTVNIVPGLFKIFD 64

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP M  + V I+ E + I V N G G+P+EIH++E +Y+PELIFGHLL
Sbjct: 65   EILVNAADNKVRDPSMKRIDVTINPEENFIEVRNDGKGIPIEIHEKEKIYIPELIFGHLL 124

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ KK TGGRNGYGAKL NIFSTEF +ETAD K  +KY Q + NNM     P I
Sbjct: 125  TSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFTLETADPKNGRKYVQTWENNMNVCHPPKI 184

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +  K+G ++TKV+FKPDL++F M  L+ D++ +M++RV D+ G + + V V LNG  + +
Sbjct: 185  TSYKKGPSYTKVAFKPDLSRFGMESLDSDILGVMRRRVYDINGSV-RDVNVYLNGKPLKI 243

Query: 265  KSFAEYVDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSF 305
            ++F  YV++Y KS+                   T  +ERV++RWEI   +S+  F+QVSF
Sbjct: 244  RNFKNYVELYLKSLEKMRKMDNGESDTTPSNIPTILYERVSDRWEIAFAVSDISFKQVSF 303

Query: 306  VNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFD 365
            VN IAT  GGTHV+Y+A+Q+   V  ++  K K  N+K + +KN++++F+N LI+NPAF 
Sbjct: 304  VNSIATTTGGTHVNYIADQIVRKVSDIL--KKKKKNIKPYQIKNNMFIFINCLIENPAFT 361

Query: 366  SQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED 425
            SQTKE LT R   FGS+C++S +++ K+  K+ +   +   A+   +  LKK+DG++   
Sbjct: 362  SQTKEQLTTRVKDFGSRCDISSDYINKI-MKTDLATKIFEIADENANNALKKSDGSRKSR 420

Query: 426  VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
            +    KLEDAN AG ++  +CTLILTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVR
Sbjct: 421  ITDYPKLEDANKAGTKDGYKCTLILTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVR 480

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
            EA+++Q+L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                
Sbjct: 481  EATADQILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD---------------- 524

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN--GK 603
                        QDHDGSHIKGL+INFI + +P LL IP FL+EFITPIVK T      K
Sbjct: 525  ------------QDHDGSHIKGLIINFIETSFPGLLDIPGFLIEFITPIVKVTITKPIKK 572

Query: 604  VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
            V+SF+++PDYE W+E    +  SW  KYYKGLGTSTS E  EYF N+  H K F      
Sbjct: 573  VISFFNLPDYEKWREE-ESHKYSWKQKYYKGLGTSTSPEIIEYFSNLDTHLKKFHALQGD 631

Query: 664  DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIP 723
            D + I+LAFSKKK + RK+WL Q+EPG  LD     I  SDF+NKELILFS+AD  RSIP
Sbjct: 632  DKDLIDLAFSKKKADDRKEWLRQYEPGTVLDPTLNEIPISDFINKELILFSLADNVRSIP 691

Query: 724  SMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFV 783
            S++DG KPGQRK+L+  FK+N   E KVA  +  VS+++AYHHGEQ+L  TI+GMAQ+FV
Sbjct: 692  SVLDGFKPGQRKVLYTCFKKNLTTEKKVANLAPAVSDYTAYHHGEQALVQTIIGMAQNFV 751

Query: 784  GSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQI 843
            G+NNI  L+PNG FGTR  GGKDAA+ARYI+T L+ I R +F   DD L  Y+ ED + +
Sbjct: 752  GTNNIYFLKPNGAFGTRATGGKDAAAARYIYTELNKIARKVFHPADDPLFRYVQEDEKTV 811

Query: 844  EPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFG 903
            EP WY+P++P VL+NG+EGIGTGWS+ IP +NP D+V N+R LLN E M+ MHPW+RG+ 
Sbjct: 812  EPEWYLPVVPMVLINGAEGIGTGWSTSIPPFNPLDVVNNIRHLLNDEEMDDMHPWFRGWT 871

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---F 960
            GT+EK  S+     Y + G IE+V   TL I ELP R WT   +E L   +  ++    +
Sbjct: 872  GTMEKIESQR----YRMYGRIEQVGPNTLEITELPARTWTSTIKEHLLLGLGGSEKVKPW 927

Query: 961  IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYD 1020
            I+   +   + T+ F + L++E M +T++ G  ++FKL + IS  NM  FD +G IKKYD
Sbjct: 928  IKDMEEQHAE-TIKFIIKLTDEEMTKTRKLGFYERFKLISPISLQNMVAFDYRGKIKKYD 986

Query: 1021 TPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDL 1080
               +IL++F+ +RLE+Y+KRK      L+ E  KL  +V+FI  +++  ++V N+ +  L
Sbjct: 987  HVHEILKDFYEVRLEYYQKRKDYMTGRLQWEAEKLSFQVKFIKMIIDKSLIVTNKPKKQL 1046

Query: 1081 LLELRQKGF--------TPFPKNSKSIEAVV-----------AGATDETEESEENPEVVN 1121
            + EL + GF          F K  + +EA++             AT + ++ +E+   VN
Sbjct: 1047 ISELEELGFPRINKEGKPHFGKIDEEVEAIISEDEDEDLEESEEATRKKDKDDES--TVN 1104

Query: 1122 GVQSI--DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
            G + +   Y+YLL + I +LT E+ + LL  + +   E+++L K + + LW  DLD    
Sbjct: 1105 GPEELFGTYEYLLGLKIWSLTKERYEKLLKQKQEKETELENLLKLSAKDLWNNDLDDFLT 1164

Query: 1180 QLDELDKSD 1188
              ++  K D
Sbjct: 1165 AYEDFQKMD 1173


>gi|344305515|gb|EGW35747.1| DNA topoisomerase 2 [Spathaspora passalidarum NRRL Y-27907]
          Length = 1429

 Score = 1113 bits (2879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/1267 (46%), Positives = 820/1267 (64%), Gaps = 100/1267 (7%)

Query: 8    PLTTSNNANVVGPTAPNKTI--------EEMYQKKSQLEHILLRPDTYIGSIEKHTQALW 59
            PL+ S N N  G + P+  +         E YQK SQLEHIL RPDTYIGS+EK    +W
Sbjct: 36   PLSDSTN-NTSGSSTPSTQVGTGPKSNASETYQKLSQLEHILKRPDTYIGSVEKTKMEMW 94

Query: 60   IYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNS 119
             ++ ES++M  + ++ VPGLYKIFDEILVNAADNK RDP M  ++V ID E+++I V N 
Sbjct: 95   CFDAESESMKFKEVTIVPGLYKIFDEILVNAADNKIRDPTMKNIRVKIDPENNVIQVMND 154

Query: 120  GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
            G G+PVEIH +E +Y+PELIFG+LLTSSNY+D+ KK TGGRNGYGAKL NIFSTEF +ET
Sbjct: 155  GKGIPVEIHTKENMYIPELIFGNLLTSSNYNDDEKKVTGGRNGYGAKLCNIFSTEFELET 214

Query: 180  ADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK 239
            AD    K YKQ +TNNMGK S+P I+  K    +TK+SFKPDLAKF+M  L++D++A+++
Sbjct: 215  ADLNTGKLYKQTWTNNMGKVSKPKITTLKTKKEYTKISFKPDLAKFDMDSLDEDILAVLR 274

Query: 240  KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV----------------TRFHE 283
            +RV DL G + K+  + LN  R+ + +F  Y++MY  ++                T  HE
Sbjct: 275  RRVYDLCGTV-KNCNIYLNDKRLSISNFKSYIEMYVNAIKERSPEPEGEESKNYTTIVHE 333

Query: 284  RVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN-- 341
              N+RWEI   +S+G F QVSFVN IAT  GGTHV YV++Q+   ++ V++K+ K     
Sbjct: 334  VFNDRWEIAFAVSDGSFNQVSFVNSIATTSGGTHVKYVSDQIITKLVEVLSKREKGKKKL 393

Query: 342  -VKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL--SEEFLKKVTAKSG 398
             ++   V++++++F+N LI+NPAF SQTKE LT + S FG K +   S+  + ++  K+G
Sbjct: 394  MIRPQEVRDNMFIFLNCLIENPAFTSQTKEQLTTKPSQFGGKDKFVPSDNLINRI-LKTG 452

Query: 399  IVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKA 458
            I + + S A   + K L+K DG++   ++G   L DAN AG ++  +CTLILTEG SA  
Sbjct: 453  IADKIRSIARANEDKALQKADGSRKNRIKGQVNLVDANKAGTKDGLKCTLILTEGLSAMN 512

Query: 459  LAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NV 516
            LA+AGLSVVGRD +G FPLRGKLLNVREAS++Q+  N+EI  +K+I+GL+    Y   ++
Sbjct: 513  LAVAGLSVVGRDYYGCFPLRGKLLNVREASADQIAKNAEINALKQIIGLQHKKVYTQESI 572

Query: 517  KSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSF 576
            KSLRYGH+MIMTDQ                            D DGSHIKGL+INF+ + 
Sbjct: 573  KSLRYGHIMIMTDQ----------------------------DQDGSHIKGLIINFLETS 604

Query: 577  WPSLLKIPSFLVEFITPIVKAT--NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKG 634
            +P LL IP FL+EFITPIVK T   +  +V+SFY+MP++E W+++  G    W+ KYYKG
Sbjct: 605  FPGLLDIPGFLLEFITPIVKVTVKGRTKRVISFYNMPEFERWRDT-EGTQCRWTQKYYKG 663

Query: 635  LGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLD 694
            LGTST  E +EYF  +  H K F      D E I+LAFSKKK + RK+WL  F PG HLD
Sbjct: 664  LGTSTPIEAREYFSALDKHLKRFHALQGDDKECIDLAFSKKKADDRKEWLQGFLPGTHLD 723

Query: 695  QKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQF 754
                 I  SDF+NKELILFSM+D  RSIPS++DGLKPGQRK+LF  +KR    E KVAQ 
Sbjct: 724  PDLNDIPISDFINKELILFSMSDNVRSIPSVLDGLKPGQRKVLFGCYKRKLRSEIKVAQL 783

Query: 755  SGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIF 814
            +GYVSE++ YHHGEQSL  TI+G+AQ+F+GSNNIN+L+PNG FG+R  GGKD ++ARYIF
Sbjct: 784  AGYVSENTGYHHGEQSLIQTIIGLAQNFIGSNNINILKPNGSFGSRAAGGKDYSAARYIF 843

Query: 815  TRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNY 874
            T ++ ITR +F   DD L  Y+ +D Q +EPTWY+P++P +LVNG+EGIGTGWS+ IP+Y
Sbjct: 844  TEINEITRTIFNPLDDPLYTYVQDDEQTVEPTWYLPVLPMILVNGAEGIGTGWSTNIPSY 903

Query: 875  NPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRI 934
            NP+DIVAN+RRL+NGE ++ M PWY+G+ G IE    ++    Y V+G IE+V+  T+ I
Sbjct: 904  NPKDIVANIRRLMNGEPLQEMTPWYKGWEGDIEPMGPQK----YKVSGRIEQVDNNTVEI 959

Query: 935  KELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGL 992
             E+P++ WT + +EFL +    ++  ++I+   ++   T++ F V LS+  M ++ + GL
Sbjct: 960  TEIPVKTWTNNVKEFLLAGFGNEKTQAWIKDMEEHH-TTSIRFVVKLSDAEMEKSLKVGL 1018

Query: 993  LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
            L++FKL +++S  NM  FD  G IKKY+   +IL++++++RLEFY+KRK    E+L+ +L
Sbjct: 1019 LERFKLVSSLSLGNMVAFDPMGRIKKYNDVLEILKDYYYVRLEFYQKRKDYMSEDLQNQL 1078

Query: 1053 LKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA----------- 1101
            + L  + RFI  ++  ++ V N+K+ +L+  L+Q  F  F +  K I+            
Sbjct: 1079 MMLSEQARFIKMIIEKKLSVANKKKKELVSLLQQHKFIKFSRQGKPIKEELFLNDDDSIE 1138

Query: 1102 ------------VVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLA 1149
                        + A    + E  + + E V       Y+YLL M I +LT E+   LL 
Sbjct: 1139 EEEEIVEASDGDISALNLKQVETDKNSTEHVPETVYSSYEYLLGMTIWSLTYERYLKLLK 1198

Query: 1150 DRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPK 1209
             RD    E+++L   + + LW +DL+     + E DK   R +EER  +    +GD   K
Sbjct: 1199 QRDIKEAELNELLSKSAKDLWNEDLERF---MVEFDKFLIRDQEERESLA--ASGDKNKK 1253

Query: 1210 IVAKRAP 1216
               ++AP
Sbjct: 1254 KRTRKAP 1260


>gi|46370594|gb|AAS90119.1| DNA topoisomerase type 2 [Tetrahymena thermophila]
          Length = 1402

 Score = 1113 bits (2878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/1173 (50%), Positives = 789/1173 (67%), Gaps = 58/1173 (4%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K++EE YQKKSQ+EHILLRPD+Y+GSIE   ++LWI  +E   +  + I +VP  YKIFD
Sbjct: 6    KSVEERYQKKSQIEHILLRPDSYVGSIENEQKSLWILNKEGTALEEKEIDFVPAFYKIFD 65

Query: 85   EILVNAADNKQRD---PKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            EI+VNAADN QR+     MD +KV+IDQ++ +ISV N+G G+P++IH+E  +Y+PE+IFG
Sbjct: 66   EIIVNAADNFQRNQDGAPMDTIKVMIDQQNQMISVWNNGQGIPIQIHKEHNIYIPEMIFG 125

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            HLLTSSNYDD  +K  GGRNG+GAKLTNIFS +FI+E  D KR K YKQ +  NM +++E
Sbjct: 126  HLLTSSNYDDKEEKVVGGRNGFGAKLTNIFSKKFIVECNDDKRKKYYKQEWRKNMSERTE 185

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            P I++ K+G N+T V+F PDL+KF M ++ DD+  L++KRV D+AG     VKV LN  +
Sbjct: 186  PLITENKKGGNFTCVTFYPDLSKFKMQNISDDMANLLRKRVYDMAGIFNNKVKVYLNNEQ 245

Query: 262  VPVKSFAEYVDMYPKSVTRFHE-----RVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            + +KSF++YV+++   +   ++       ++RWEI VT S+GQF+QVSFVNGI T +GG 
Sbjct: 246  IKIKSFSQYVNLFIPDIEEQYKCYDPTMTSDRWEILVTFSDGQFKQVSFVNGICTSRGGK 305

Query: 317  HVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            HVD+V +++   +   + KKNK+ ++K H +K +L++F+N LI NP+FDSQTK+TLT + 
Sbjct: 306  HVDFVIDKIVERMQEQILKKNKDLDIKPHQIKQNLFIFMNCLIVNPSFDSQTKDTLTTKA 365

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN-DGTKTEDVRGISKLEDA 435
            S+FGSK ELSE+F+KK+   +GI+E ++S A  +Q+  L K   G K   + GI KL+DA
Sbjct: 366  SAFGSKPELSEKFIKKILG-TGIIEQIVSQAKARQNAKLAKTLKGGKKGRITGIPKLDDA 424

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AG   SE CTLILTEGDSAKALAMAG+ VVGRD +GVFPL+GKLLNVREA+  Q++ N
Sbjct: 425  NDAGTARSENCTLILTEGDSAKALAMAGIEVVGRDNYGVFPLKGKLLNVREANKKQIIEN 484

Query: 496  SEIGNIKKILGLKQGVE-YNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
             EI NI KI+GL   V+ Y N K LRYG LMIM DQ                        
Sbjct: 485  QEIQNICKIIGLDPAVQNYENTKQLRYGSLMIMADQ------------------------ 520

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYE 614
                D DGSHIKGL+INFIH FWPSL K+  FL EFITPI+K T K  +V SF+++ D++
Sbjct: 521  ----DSDGSHIKGLVINFIHHFWPSLFKMKGFLKEFITPILKVT-KGDEVHSFFTIQDFK 575

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
             +    G     + +KYYKGLGTST KE KEYF N   H+ +F + D+ D EAIEL FS 
Sbjct: 576  NFAAQKGDRLKQYKVKYYKGLGTSTDKEAKEYFSNFYKHQINFQYLDENDMEAIELGFSG 635

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            KKI+ RK WL  ++P + +D   K ++   F+++ELI FS AD  RSIPS+ DGLKPGQR
Sbjct: 636  KKIKERKDWLANYDPNSFVDYNIKQLRSKXFIDRELIHFSNADNLRSIPSLCDGLKPGQR 695

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            KILF  FKRN   E KVAQ  GYV+EHSAYHHGEQSLASTI+GMAQ+FVGSNNINL+ P 
Sbjct: 696  KILFSCFKRNLKSEIKVAQLIGYVAEHSAYHHGEQSLASTIIGMAQNFVGSNNINLMMPI 755

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            GQFGTRNQGGK+ ASARYIFT LS ITR LFP+ DD +L YL +D Q +EP WYMPIIP 
Sbjct: 756  GQFGTRNQGGKEHASARYIFTSLSKITRILFPEHDDHVLKYLEDDNQVVEPEWYMPIIPM 815

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
             LVNGS GIGTGWS+ IPNYN + IV  +R  L G     +HPWY+GF G IE   + + 
Sbjct: 816  CLVNGSSGIGTGWSTDIPNYNHKGIVEQIRGKLEGRPFTELHPWYKGFQGQIE--INPKG 873

Query: 915  GVTYTVTGI--IEEVNETTLRIKELPIRRWTQDYREFL-ESIID--QNDSFIRGFRQYSD 969
            G  Y V G   I+EV E T++I ELP+ +WT+DY+  L + ++   + +  I   R+Y  
Sbjct: 874  G--YIVKGQYEIDEVEE-TIKITELPVGKWTRDYKVVLIQELLSPPKGEPEIEDIREYHT 930

Query: 970  DTTVDFEVFLSEESMMRTKQEG-LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
            +  V FEV   +    R +Q G + KK KL+TT+ T+N+ +F+ K  +K+Y +  +I+EE
Sbjct: 931  NNRVHFEV---QAIPGRIQQWGDIEKKLKLSTTMQTTNIVMFNDKYKLKRYQSTVEIMEE 987

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ +RL+ Y+KRK   +  ++ ++  L+NK++FI  VVNG + + N ++  +L +L++ G
Sbjct: 988  FYALRLKCYQKRKDYLVSKIQRDVDILQNKMKFITLVVNGTLEIRNARKKGVLNKLKELG 1047

Query: 1089 FTPFPK----NSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
             TP  K    NS            + EE EE       +   +Y+YLLSM I +LT EKV
Sbjct: 1048 LTPMSKITRINSTKNLDNEDEEVQQDEEEEEEQVQEGEIPLSEYNYLLSMPIFSLTEEKV 1107

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
              L    ++   E+  L+K   + +W +DLD  
Sbjct: 1108 LQLKKQVEEKESELLILQKKEIKDMWTEDLDKF 1140


>gi|402082870|gb|EJT77888.1| DNA topoisomerase 2 [Gaeumannomyces graminis var. tritici R3-111a-1]
          Length = 1699

 Score = 1113 bits (2878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/1186 (48%), Positives = 789/1186 (66%), Gaps = 74/1186 (6%)

Query: 24   NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
            NK+  E YQK +QLEHI+ RPDTYIGS+E+  Q LW++ +E++ + +RT+++VPGLYKIF
Sbjct: 126  NKSATETYQKLTQLEHIIKRPDTYIGSVERTDQKLWVFNKETQLVENRTVNFVPGLYKIF 185

Query: 84   DEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            DEILVNAADN QRD  M A+KV ID+E   ISV N+G G+PVE+H++E VY+PELIFGHL
Sbjct: 186  DEILVNAADNSQRDKTMTALKVTIDRESGQISVENNGKGIPVEMHEKEKVYIPELIFGHL 245

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LT SNYDD   KT GGRNGYGAKLTNIFSTEFI+E  D    K Y Q +TNNMG   +P 
Sbjct: 246  LTGSNYDDKELKTVGGRNGYGAKLTNIFSTEFILECQDSNNGKNYSQRWTNNMGVCEKPK 305

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
            I K K+  ++ +V+FKPD  +F M + ++DD+  LM +RV D+AG L  ++KV LNG ++
Sbjct: 306  I-KAKKSADYVRVTFKPDYKRFGMENGIDDDLEGLMYRRVYDMAGTLESNIKVFLNGEQL 364

Query: 263  PVKSFAEYVDMYPKSVTRFHE--------------------RVNERWEICVTLSEGQFQQ 302
             + +F +Y +MY KS+ +  +                    +++ RW++  T+S+G FQQ
Sbjct: 365  KI-NFKKYCEMYAKSIAKERDDVAPEGAEGAPVAEVIFEDPKLHTRWKVAFTVSDGSFQQ 423

Query: 303  VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNP 362
            VSFVN IAT  GGTH +Y+A+Q+   ++A +NKK K  ++K ++++N++++FV+AL++NP
Sbjct: 424  VSFVNSIATTSGGTHTNYIADQICQALLADLNKKKKGHSLKLNHIRNYIFIFVSALVENP 483

Query: 363  AFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
            AF SQTKE +T + S+FGSKC LS+ FLKKV     I E ++ +A  K  K L K+DG K
Sbjct: 484  AFTSQTKEQMTTKASAFGSKCTLSDAFLKKVKQTEAI-ENIIHFAEKKADKMLSKSDGNK 542

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
               +    KL +ANLAG R+  +CTLILTEGDSA+ LA+AG +V+  DR GVFPLRGK+L
Sbjct: 543  RSRISN-DKLVEANLAGTRHGHECTLILTEGDSARGLAVAGRAVLDPDRIGVFPLRGKML 601

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            NVR+A   Q+L N EI NIK+ LGLK    Y + KSLRYGHLMIM DQ            
Sbjct: 602  NVRDAPVEQILKNKEIQNIKQFLGLKHKQNYTDTKSLRYGHLMIMADQ------------ 649

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA----- 597
                            DHDGSHIKGLLINF+   +PSLL+IP F  EFITP+VK      
Sbjct: 650  ----------------DHDGSHIKGLLINFLQVQFPSLLQIPDFFQEFITPVVKVWQGSN 693

Query: 598  TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDF 657
              K  ++ SF+++P YE WKE+       W  KY KGLGTS++++ + YF ++  H K+F
Sbjct: 694  PKKPLRLKSFFNLPQYEEWKEAHKHEIRRWDYKYLKGLGTSSNEDAQVYFTDLDRHLKEF 753

Query: 658  VWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMAD 717
                 Q+ +  ELAFSKKK +ARK+WL  F PG +LD   K + Y+DFVNKELILFSMAD
Sbjct: 754  DTMKPQEVDLFELAFSKKKADARKEWLGNFVPGTYLDNSTKSVSYTDFVNKELILFSMAD 813

Query: 718  LQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
              RSIPS+VDGLKPGQRK++F SFKRN +K+ KV + +G+VSE +AYHHGE SL  TI+G
Sbjct: 814  NMRSIPSVVDGLKPGQRKVIFASFKRNLVKDKKVVELAGFVSEVAAYHHGEASLQQTIVG 873

Query: 778  MAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLN 837
            +AQ+FVGSNN+N L+P+G FG+R  GG DAASARYIFTRLSP  R +F   D+ +L +  
Sbjct: 874  LAQNFVGSNNVNCLEPSGNFGSRLAGGSDAASARYIFTRLSPFARRVFSALDEPILQHQV 933

Query: 838  EDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRR---LLNGEMMEP 894
            +DG+ IEP  Y P+IP VLVNG++GIGTGWS+ IPNY+P+DIV N+RR    ++GE  +P
Sbjct: 934  DDGKVIEPKTYAPVIPMVLVNGADGIGTGWSTSIPNYHPKDIVDNLRRRMGRMDGEEEQP 993

Query: 895  ---MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLE 951
               M PW+RG+ G++   A      ++  T  ++E N   + I ELPIR WT D++  LE
Sbjct: 994  FQTMLPWFRGWKGSVR--AEGPGRYSFNGTAEVDEKNPNEVVITELPIRMWTDDFKAKLE 1051

Query: 952  SII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHL 1009
             II  ++  SFI+ +++++D   V F + L E+ M    +EGLL+KFKL   I+T+N+  
Sbjct: 1052 DIIRAEKAPSFIKDYKEFNDHRNVHFIIQLEEKHMQIALKEGLLEKFKLLKNIATTNLVA 1111

Query: 1010 FDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGE 1069
            FD+ G+I+KY+  E ILEE++H R   Y +RK   L+    +  KL+N+ RFI  ++ G+
Sbjct: 1112 FDTNGMIRKYEKVEDILEEYYHYRFNMYTERKAHWLKVYHADYRKLKNQYRFISEIIEGK 1171

Query: 1070 IVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYD 1129
            +VV+ +K+  L+ ELR + +  FPK         A    E +E  E  E  +   + DYD
Sbjct: 1172 LVVSKKKKVVLVQELRDRKYEAFPKTE------AAKRAKEDDEDNEPAEEEDEGSASDYD 1225

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            YLLSMAI +LT E+++ L    D    E DDL   + + LW KDLD
Sbjct: 1226 YLLSMAIWSLTYERLEKLKKLIDAKKAEYDDLESKSEKDLWCKDLD 1271


>gi|426339768|ref|XP_004033813.1| PREDICTED: DNA topoisomerase 2-beta [Gorilla gorilla gorilla]
          Length = 1518

 Score = 1113 bits (2878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1285 (47%), Positives = 814/1285 (63%), Gaps = 126/1285 (9%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E   Q +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 45   SVERVYQKKTQLEHILLRPDTYIGSVEPLMQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 103

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 104  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 163

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 164  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 222

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
            K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG C G  VKV  NG ++PV
Sbjct: 223  KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCRG--VKVMFNGKKLPV 280

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
              F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG 
Sbjct: 281  NGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGR 340

Query: 317  HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYV +QV   ++ VV KKNK   +VK   V++ L++                      
Sbjct: 341  HVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVRDALYI---------------------- 378

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
                 S C              GIVE++L+W  FK    L KK    K   ++GI KL+D
Sbjct: 379  ----ASNC--------------GIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDD 420

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ 
Sbjct: 421  ANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIME 480

Query: 495  NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI NI KI+GL+    Y++   +K+LRYG +MIMTD                      
Sbjct: 481  NAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTD---------------------- 518

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                  QD DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P
Sbjct: 519  ------QDQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIP 570

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LA
Sbjct: 571  EFDEWKKHI-ENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLA 629

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
            FSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +
Sbjct: 630  FSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNE 689

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +A
Sbjct: 690  RSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 749

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D
Sbjct: 750  QNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDD 809

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y
Sbjct: 810  NQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNY 869

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
            + F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D
Sbjct: 870  KNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTD 925

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G 
Sbjct: 926  KTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGC 985

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR
Sbjct: 986  LKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENR 1045

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
             + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+L+M
Sbjct: 1046 SKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNM 1105

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD-ELDKSDARAEE 1193
            ++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A   +LD +LD +  + E 
Sbjct: 1106 SLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAFVEELDGDLDTAAVKVEF 1165

Query: 1194 ER----MKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKG 1249
            +       ++G G     P +   + PK  R+  +     R T         T   KP  
Sbjct: 1166 DEEFSGAPVEGAGEEALTPSVPINKGPKPKREKKEPGTRVRKTP--------TSSGKPSA 1217

Query: 1250 RAGLKKAPAEKLDDDEEDEVPDLKQ 1274
            +   K+ P     DDE     DL++
Sbjct: 1218 KKVKKRNP---WSDDESKSESDLEE 1239


>gi|367012033|ref|XP_003680517.1| hypothetical protein TDEL_0C04170 [Torulaspora delbrueckii]
 gi|359748176|emb|CCE91306.1| hypothetical protein TDEL_0C04170 [Torulaspora delbrueckii]
          Length = 1400

 Score = 1112 bits (2876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/1247 (47%), Positives = 812/1247 (65%), Gaps = 92/1247 (7%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T  +K+  E YQK SQLEHIL RPDTYIGS+E   Q  WI++EE+  MI +T++ VPGLY
Sbjct: 2    TVDSKSASERYQKISQLEHILKRPDTYIGSVESQEQQQWIHDEETDCMIEKTVNIVPGLY 61

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADNK RDP M  ++V I +E +LI V N G G+P+EIH++E +Y+PELIF
Sbjct: 62   KIFDEILVNAADNKVRDPSMKKIEVNIQREKNLIEVKNDGKGIPIEIHEKEKIYIPELIF 121

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            GHLLTSSNYDD+ KK TGGRNGYGAKL NIFSTEF +ETAD    +KY Q + NNMG   
Sbjct: 122  GHLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFTLETADSNTGQKYVQKWENNMGVCH 181

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
             P I+  K+G ++TKVSFKPDL +F+M  L+DD++ ++++RV D+ G + + + V LNG 
Sbjct: 182  PPKITSYKKGPSFTKVSFKPDLKRFSMETLDDDIIGVLRRRVYDINGSV-RDISVYLNGK 240

Query: 261  RVPVKSFAEYVDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQ 301
             + +++F  YV++Y KS+                   T  +ERVN  WEI  ++S+  FQ
Sbjct: 241  SLKIRNFKNYVELYVKSLEKKRLAHGNTVDDSQVKMPTILYERVNSCWEIAFSVSDISFQ 300

Query: 302  QVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDN 361
            Q+SFVN IAT  GGTH++Y+ +Q+   V  V+ K+ K+  +K   +KNH+++FVN LI+N
Sbjct: 301  QISFVNSIATTAGGTHINYITDQIIKKVSEVLKKQKKS--IKPFQIKNHIFLFVNCLIEN 358

Query: 362  PAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT 421
            PAF SQTKE LT R   FGS+CE+S++++KK+  K+ +   +L  A   ++  LKK+DG+
Sbjct: 359  PAFTSQTKEQLTTRVRDFGSRCEISDDYVKKI-MKTDLQARILEIATENENNALKKSDGS 417

Query: 422  KTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKL 481
            +   +    KLEDAN AG +   +CTL+LTEGDSA +LA+AGLSVVGRD +G +PLRGK+
Sbjct: 418  RKNRITDYPKLEDANKAGTKEGHKCTLVLTEGDSALSLAVAGLSVVGRDYYGCYPLRGKI 477

Query: 482  LNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLW 541
            LNVREA++ Q+L N+EI  IKKI+GL+    Y N  SLRYGHLMIMTDQ           
Sbjct: 478  LNVREATAEQILKNAEIQAIKKIMGLQHRKRYENTSSLRYGHLMIMTDQ----------- 526

Query: 542  FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT--N 599
                             DHDGSHIKGL+INF+ S +P LL IP FL+EFITPIVK T   
Sbjct: 527  -----------------DHDGSHIKGLIINFLDSSFPGLLDIPGFLLEFITPIVKVTITR 569

Query: 600  KNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
               +V+SFY+MPDYE W+     +  +W  KYYKGLGTS+S+E + YF ++  H K F  
Sbjct: 570  PRREVISFYNMPDYEKWRAE-ESSRYTWKQKYYKGLGTSSSQEVRAYFSDLDRHLKKFHA 628

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
             +  D E IELAF+KKK + RK+WL Q+EPG  LD     I  SDF+NKE ILFS+AD  
Sbjct: 629  LEGGDQELIELAFAKKKADDRKEWLRQYEPGTVLDPNLTEIPISDFINKEFILFSLADNI 688

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIP+++DG KPGQRK+L+  F R    + KVAQ + +V+E ++YHHGEQ+LA TI+G+A
Sbjct: 689  RSIPNILDGFKPGQRKVLYGCFMRKMSTDIKVAQLAPFVAEKTSYHHGEQALAQTIIGLA 748

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNINLL+PNG FGTR  GGKDAA+ARY++T LS ITR +F   DD L  YL ED
Sbjct: 749  QNFVGSNNINLLKPNGAFGTRATGGKDAAAARYLYTELSKITRKIFHPSDDPLYKYLQED 808

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
               IEP WY+PI+P +LVNG+EGIGTGWS+ IP +NP DIV N++ L+  E ME MHPW+
Sbjct: 809  EATIEPEWYLPILPMILVNGAEGIGTGWSTNIPPFNPLDIVKNLKHLMKNEPMEEMHPWF 868

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFL---ESIIDQ 956
            +G+GGT+EK  S+     Y + G IE+   TTL I ELP R WT   +E+L    S  ++
Sbjct: 869  KGWGGTLEKIDSQR----YRMYGKIEQTGPTTLEITELPARTWTSTIKEYLLLGLSGTEK 924

Query: 957  NDSFIRGF-RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
               +I+    Q+SD  T+ F + L++E M +T++ G  ++FKLT+TI+ +NM  F     
Sbjct: 925  MKPWIKDMEEQHSD--TIRFIIKLTQEEMDKTRKIGFFERFKLTSTINLNNMVAFTPSSK 982

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            I+KY+   +ILEEF++ RLE+Y+KRK      L+ E+ KL  +VRFI  ++  E+ V N+
Sbjct: 983  IRKYENVGEILEEFYYTRLEYYQKRKDYMTSRLQWEVEKLSYQVRFIKMIIEKELTVTNK 1042

Query: 1076 KRTDLLLELRQKGF-------TPF-PKNSKSIEAVV----AGATDETEESEENPEVVNGV 1123
                ++ EL   GF        PF  K ++ I+ +V        +E EE+    E+VNG 
Sbjct: 1043 PHKQIVAELETNGFPRINKEGKPFYGKTNEQIKELVDEEIVAEEEEDEEAANEGEIVNGP 1102

Query: 1124 QSI--DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL 1181
            + +   ++YLL M I +LT E+ + LL  + +   E++ L + + + LW  D++      
Sbjct: 1103 EELYGSFEYLLGMRIWSLTKERYERLLKQKQEKQVELELLLELSAQQLWETDIEEFATAY 1162

Query: 1182 DELDKSDARAEEERMKIKGNGNGD---AGPKIVAKRAPKNARKNDKK 1225
            +   K D   EE R       NGD   A  K   KR  +N  K D++
Sbjct: 1163 EHFLKLD---EESR-------NGDVPTASSKAKGKRK-RNTAKTDEE 1198


>gi|255729204|ref|XP_002549527.1| DNA topoisomerase 2 [Candida tropicalis MYA-3404]
 gi|240132596|gb|EER32153.1| DNA topoisomerase 2 [Candida tropicalis MYA-3404]
          Length = 1398

 Score = 1112 bits (2876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 593/1290 (45%), Positives = 837/1290 (64%), Gaps = 84/1290 (6%)

Query: 19   GPTAPN-KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVP 77
            G + PN  +  E YQK SQLEHIL RPDTYIGS+EK    +W ++ E+++M+ + ++ VP
Sbjct: 128  GSSTPNPASASETYQKLSQLEHILKRPDTYIGSVEKTKMEMWCFDAETESMVFKEVTIVP 187

Query: 78   GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
            GLYKIFDEILVNAADNK RDP M  +KV ID E++ I V N G G+PVE+H +E +Y+PE
Sbjct: 188  GLYKIFDEILVNAADNKIRDPTMKNIKVKIDPENNTIEVMNDGKGIPVEMHTKENMYIPE 247

Query: 138  LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
            LIFG+LLTSSNYDDN KK TGGRNG+GAKL NIFST+F +ETAD    K YKQV+T+NM 
Sbjct: 248  LIFGNLLTSSNYDDNQKKVTGGRNGFGAKLCNIFSTQFEVETADLNTGKLYKQVWTDNMT 307

Query: 198  KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL 257
              ++P I+  +    +TK++FKPDLAKF+M  L++D++A++++RV DL G + K+  + L
Sbjct: 308  NVAKPKITTLRTKKEYTKITFKPDLAKFDMDSLDEDLLAVLRRRVYDLCGTV-KNCNIYL 366

Query: 258  NGHRVPVKSFAEYVDMYPKSV------------------TRFHERVNERWEICVTLSEGQ 299
            N  R+ + SF  YV+MY K++                  T  HE  NERWE+   +S+G 
Sbjct: 367  NDKRLSISSFKSYVEMYVKAIRERSPEPLTEDGTSKNFTTIVHEVFNERWEVAFAVSDGT 426

Query: 300  FQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VKAHNVKNHLWVFVN 356
            F QVSFVN IAT  GGTHV YV++Q+ N ++  ++KK K      +K   V++++++F+N
Sbjct: 427  FNQVSFVNSIATTAGGTHVKYVSDQIINKLVETLSKKEKGKKKLMIKPQEVRDNMFLFIN 486

Query: 357  ALIDNPAFDSQTKETLTLRQSSFGSKCE-LSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
             LI+NPAF SQTKE LT + S FG K + ++ + L     K+ IV+ + + AN  + K L
Sbjct: 487  CLIENPAFTSQTKEQLTTKVSQFGGKQKFVANDNLINRILKTSIVDKIRAIANANEDKAL 546

Query: 416  KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVF 475
            +K DG++   ++G   L DAN AG +    CTLILTEG SA  LA+AGLSVVGRD +G F
Sbjct: 547  QKADGSRKSRIKGQVSLVDANKAGTKLGHNCTLILTEGLSALNLAVAGLSVVGRDYYGCF 606

Query: 476  PLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLL 533
            PLRGKLLNVREAS++Q+  N+EI  +K+I+GL+    Y   N+K LRYGH+MIMTD    
Sbjct: 607  PLRGKLLNVREASADQISKNAEINALKQIIGLQHKKHYTAENIKQLRYGHIMIMTD---- 662

Query: 534  APLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITP 593
                                    QD DGSHIKGL+INF+ + +P LL+IP FL+EFITP
Sbjct: 663  ------------------------QDQDGSHIKGLIINFLETSFPGLLEIPGFLLEFITP 698

Query: 594  IVKATNK-----NGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQ 648
            IVK T K     N +V+ FY+MP++EAW++   G+   W+ KYYKGLGTST  E +EYF 
Sbjct: 699  IVKVTIKTRGSGNNRVIPFYTMPEFEAWRDG-EGSQCRWTHKYYKGLGTSTPMEAREYFT 757

Query: 649  NITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNK 708
             +  H K F     +D   I+LAFSKKK + RK WL  F PG HLD +   I  SDF+NK
Sbjct: 758  ALDRHLKKFHALQGEDASYIDLAFSKKKADERKDWLQGFIPGTHLDPEINEIPISDFINK 817

Query: 709  ELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGE 768
            ELILFSM+D  RSIPS++DGLKPGQRK+L+   K+    E KVAQ +GYVSE++ YHHGE
Sbjct: 818  ELILFSMSDNIRSIPSVLDGLKPGQRKVLYGCIKKKLKSEIKVAQLAGYVSENTGYHHGE 877

Query: 769  QSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKD 828
            QSL  TI+G+AQ+FVGSNNIN+L+PNG FG+R  GGKD ++ARYIFT L+ ITR +F   
Sbjct: 878  QSLVQTIIGLAQNFVGSNNINILKPNGSFGSRAAGGKDFSAARYIFTELNEITRKIFNPL 937

Query: 829  DDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN 888
            DD L +Y+ +D Q +EP WY+P++P +LVNG+EGIGTGWS+ IP+YNP+D+VAN++RL+N
Sbjct: 938  DDPLYNYVQDDEQTVEPEWYLPVLPMILVNGAEGIGTGWSTNIPSYNPKDLVANIKRLMN 997

Query: 889  GEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE 948
            GE ++ M PWY+G+ G IE++  ++    Y +TG IE+V +  + I ELP++ WT +Y+E
Sbjct: 998  GEELQEMTPWYKGWDGDIEQSGPQK----YKITGRIEQVGDNEVDITELPVKVWTNNYKE 1053

Query: 949  FLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN 1006
            FL +    ++  ++I+   ++   T++ F V L++  M ++ + GL+++FKL +++S  N
Sbjct: 1054 FLLAGFGTEKTPAWIKDMEEHH-TTSIKFVVKLTDAEMQKSLRMGLMERFKLISSLSLGN 1112

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            M  FDS G IKKY    +IL+EF+++RLE+YEKRK   ++ L+ EL+ L  K RF+  ++
Sbjct: 1113 MVAFDSMGRIKKYTDVLEILKEFYYLRLEYYEKRKSYMVDKLQSELITLSEKARFVKLII 1172

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS- 1125
            + ++ ++N+K+ DL+ EL    F     N +  +A    ++ + ++ E   E  NG  S 
Sbjct: 1173 DKKLSISNKKKKDLISELIANNFKKLKANGEQQDA----SSLDGDDDEVEGEDDNGNSSG 1228

Query: 1126 IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELD 1185
              Y+YLLSM++ +LT E  + LL  RD+  EE++ L   T  +LW  DLD      +   
Sbjct: 1229 SGYNYLLSMSLWSLTREHFERLLQQRDQKEEELNVLLGKTATNLWEADLDEFMEAYEAFL 1288

Query: 1186 KSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVV 1245
            K D   EEER  +  NG          K+  K   +N   S +  A++ +      TKV 
Sbjct: 1289 KKD---EEERESLASNGK---------KKPAKRRARNTASSKDQPASKKLKTEPKETKVT 1336

Query: 1246 KPKGRAGLKKAPAEKLDDDEEDEVPDLKQR 1275
            K K  + +         + E+  VP+ K++
Sbjct: 1337 KKKSPSPVTVKKETVTKEKEKPVVPEEKKK 1366


>gi|448515221|ref|XP_003867280.1| Top2 DNA topoisomerase II [Candida orthopsilosis Co 90-125]
 gi|380351619|emb|CCG21842.1| Top2 DNA topoisomerase II [Candida orthopsilosis]
          Length = 1473

 Score = 1112 bits (2875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1425 (43%), Positives = 883/1425 (61%), Gaps = 135/1425 (9%)

Query: 9    LTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTM 68
            L +S+NA+ +    P+    E YQK SQLEHIL RPDTY+GS+EK    +W ++ ES++M
Sbjct: 74   LNSSSNASTISTGKPSNA-SETYQKLSQLEHILKRPDTYVGSVEKTKMEMWCFDAESESM 132

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIH 128
              + ++ VPGLYKIFDEILVNAADNK RDP M  +KV ID E+++I V N G G+PVE+H
Sbjct: 133  KFQEVTIVPGLYKIFDEILVNAADNKIRDPSMKNIKVRIDPENNIIQVFNDGKGIPVEMH 192

Query: 129  QEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKY 188
             +E +Y+PELIFG+LLTSSNYDD+ KK TGGRNG+GAKL NIFST+F IETAD    K Y
Sbjct: 193  TKEKMYIPELIFGNLLTSSNYDDDQKKVTGGRNGFGAKLCNIFSTQFEIETADLNTGKLY 252

Query: 189  KQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGC 248
            KQ +T+NM K  +P I+  K    +TK++FKPDL+KF+M  L++D+++++++RV DL G 
Sbjct: 253  KQTWTDNMTKVGKPKITALKTKKEYTKITFKPDLSKFDMDSLDEDLLSVLRRRVYDLCGT 312

Query: 249  LGKSVKVELNGHRVPVKSFAEYVDMYPKSV-----------------TRFHERVNERWEI 291
            + K+  + LN  R+PV SF  YV+MY K++                 T  HE  N+RWE+
Sbjct: 313  V-KNCNIYLNDKRLPVTSFKSYVEMYVKAIKERSPEPEGEGAPKNYTTIVHEVFNDRWEV 371

Query: 292  CVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VKAHNVK 348
               +S+G F QVSFVN IAT  GGTHV YV++Q+ + ++  ++KK K      +K + V+
Sbjct: 372  AFAVSDGTFNQVSFVNSIATTAGGTHVKYVSDQIISKLVETLSKKEKGKKKLMIKPNEVR 431

Query: 349  NHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL--SEEFLKKVTAKSGIVETLLSW 406
            +++++F+N LI+NPAF SQTKE LT + S FG K +   S+  + +V  ++GI E +   
Sbjct: 432  DNMFIFINCLIENPAFTSQTKEQLTTKVSQFGGKEKFVASDNLISRV-LRTGIAEKIRDI 490

Query: 407  ANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSV 466
            AN  + K L+K DG++   ++G   L DAN AG ++  +CTLILTEG SA  LA+AGL+V
Sbjct: 491  ANANEDKALQKVDGSRKSRIKGQVNLVDANKAGTKDGTKCTLILTEGLSALNLAVAGLTV 550

Query: 467  VGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHL 524
            +GRD +G FPLRGKLLNVREAS++Q+  N+EI ++K+I+GL+    Y   N+KSLRYGH+
Sbjct: 551  IGRDYYGCFPLRGKLLNVREASADQIAKNAEINSLKQIIGLQHKKAYTAENIKSLRYGHI 610

Query: 525  MIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIP 584
            MIMTDQ                            D DGSHIKGL+INF+ + +P LL IP
Sbjct: 611  MIMTDQ----------------------------DQDGSHIKGLIINFLETSFPGLLDIP 642

Query: 585  SFLVEFITPIVKATNKN---GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSK 641
             FL+EFITPIVK T K     KV+ FYSMP++EAW++   G    W+ KYYKGLGTST  
Sbjct: 643  GFLLEFITPIVKVTVKGRGAKKVIPFYSMPEFEAWRDG-EGQTCRWTQKYYKGLGTSTPM 701

Query: 642  EGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIK 701
            E +EYF  +  H K F     +D   I+LAFSKKK + RK+WL  F PGN LD +   I 
Sbjct: 702  EAREYFTALDRHLKRFHALQGEDSNYIDLAFSKKKADERKEWLQNFVPGNQLDPELNEIP 761

Query: 702  YSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEH 761
             S+F+NKELILFSM+D  RSIPS++DGLKPGQRK+LF  FKRN   E KVAQ + YVSE+
Sbjct: 762  ISEFINKELILFSMSDNIRSIPSVLDGLKPGQRKVLFGCFKRNLKSEIKVAQLAAYVSEN 821

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
            + YHHGE SL  TI+G+AQ+FVGSNNIN+L+PNG FG+R  GGKDAA+ARYIFT L+ IT
Sbjct: 822  TGYHHGEVSLVQTIIGLAQNFVGSNNINILKPNGAFGSRATGGKDAAAARYIFTELNDIT 881

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            + +F   D+ +  Y+ +D Q +EP WY+P++P +LVNG+EGIGTGWS+ IP+++P+DIV 
Sbjct: 882  KAIFNPLDNPIYTYVQDDEQTVEPQWYLPVLPMILVNGAEGIGTGWSTNIPSFDPKDIVV 941

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
            N+RRL+N E +E M PWY+G+GG IE    ++    Y ++G IE+++  T+ I E+P++ 
Sbjct: 942  NLRRLMNNEPLEEMTPWYKGWGGFIEPMGQQK----YKISGRIEQIDNNTVEITEIPVKT 997

Query: 942  WTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLT 999
            WT   +EFL +    ++  ++I+   ++   T + F V L++  M +  + GLL+KFKLT
Sbjct: 998  WTNTVKEFLLAGFGNEKTPAWIKDMEEHH-TTNIRFIVKLNDAEMEKALKVGLLEKFKLT 1056

Query: 1000 TTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKV 1059
            +++S +NM  FD  G IKKY+   +IL++F+++RLE+YEKRK   LE L+ +LL +  + 
Sbjct: 1057 SSVSLANMVAFDPYGRIKKYNDVFEILKDFYYVRLEYYEKRKNHMLEMLQRKLLMISEQA 1116

Query: 1060 RFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA----VVAGATDETEESEE 1115
            RF+  ++  E+ V N+K+ DL+  L Q  FT F K+ K +E+    V     D  EE E 
Sbjct: 1117 RFVKMIIEKELSVANKKKKDLIELLEQHEFTKFTKDGKPVESKSSDVFIDENDSEEEIEN 1176

Query: 1116 NPEV-----------VNGVQSID-----YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVD 1159
              +V           V G    D     YDYLL M I +LT E+   LL ++  L +E++
Sbjct: 1177 EGDVSALNLKKSDDRVEGEHKPDTIFSSYDYLLGMTIWSLTHERYVKLLNEKSNLQKELE 1236

Query: 1160 DLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGN---------------- 1203
             L   +  +LW  DLD     + E +   A+  EER  +  +GN                
Sbjct: 1237 ILIGKSAVNLWNHDLDEF---MKEYELFLAKDAEEREHLSSSGNKKKTTRKRKAVKSEAE 1293

Query: 1204 ----------GDAGPKIVAKRA-----PKNARKNDKKSNNARATEAMGEM------DNVT 1242
                        A PK V+K       PK+A      + +  +T A  E+      +++ 
Sbjct: 1294 PAKKVKVERETQATPKGVSKTCTMQAKPKSASIEPVSTPSTSSTPAPKEVTVKKEPNDIL 1353

Query: 1243 KVVKP----KGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVM 1298
                P    K ++G K A +EK        + D    + +++ + +S K  P P QS + 
Sbjct: 1354 SFFSPSNKSKTKSGDKPAISEKPSKPIASSIFDSDDDIFEVSGK-SSEKSNPKPKQSILD 1412

Query: 1299 ETEKVQV----PAKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDD 1339
            E ++++V    P   +  S+ T   +  +T   SD E +  I+DD
Sbjct: 1413 ELDELEVLGDKPQVLESRSRSTRPVRAKITSVFSDDESDNAIEDD 1457


>gi|342884609|gb|EGU84816.1| hypothetical protein FOXB_04711 [Fusarium oxysporum Fo5176]
          Length = 1666

 Score = 1110 bits (2871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1209 (47%), Positives = 790/1209 (65%), Gaps = 82/1209 (6%)

Query: 8    PLTTSNNANVV--GPTAPNK--TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEE 63
            PL    N ++V   P  P K  T  EMY K SQLEHIL RPDTYIGS+E+  Q +W+  +
Sbjct: 94   PLEELENDSMVIDSPAKPGKKKTATEMYTKLSQLEHILKRPDTYIGSVERTEQQMWVLNK 153

Query: 64   ESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGV 123
            E++ M ++ +S+VPGLYKIFDEILVNAADNKQRD  M  +K+ ID+E+ +ISV N+G G+
Sbjct: 154  ETQLMEYKNVSFVPGLYKIFDEILVNAADNKQRDGSMTYMKINIDRENGVISVENNGKGI 213

Query: 124  PVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGK 183
            P+ IH++E +Y+PELIFGHLL  SN+DD+ KKT GGRNGYGAKL N+FSTEF +E  D +
Sbjct: 214  PIVIHEKEKIYIPELIFGHLLAGSNFDDDEKKTVGGRNGYGAKLCNVFSTEFNLECQDSE 273

Query: 184  RLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRV 242
              K+YKQ + NNM    +  I+  K  D +T+V+FKPD  +F M   ++DD+ +L+ +RV
Sbjct: 274  HGKRYKQTWRNNMQTMEKAKITSSKTSD-FTRVTFKPDFKRFGMEDGIDDDLESLLHRRV 332

Query: 243  VDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE--------------- 287
             D+ G + + +KV LNG ++ +K F  Y D+Y KS+ +  ER  E               
Sbjct: 333  YDMVGTI-RGIKVFLNGEQIKIKDFKAYCDLYAKSIAK--ERSTEEGGAPTCTVEMDKDK 389

Query: 288  ---RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKA 344
               RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+QV   ++  +NKK K   +K 
Sbjct: 390  SHPRWEVGFAVSDGTFQQVSFVNSIATTSGGTHVNYIADQVTEALLKALNKKRKGHALKQ 449

Query: 345  HNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLL 404
             ++KNH+++FVN  I+NPAF SQTKE +T + S FGSKC+L E+FLKK+ AKS  ++ +L
Sbjct: 450  SHLKNHIFIFVNCYINNPAFTSQTKEQMTTKPSQFGSKCKLGEDFLKKI-AKSDALQNIL 508

Query: 405  SWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGL 464
             +A  K  K L K DG K   V   +KL +AN AG R   +CTLILTEGDSAKALA++G 
Sbjct: 509  DFAEKKADKMLAKGDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKALAVSGR 567

Query: 465  SVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHL 524
            +++  DR GVFPLRGKLLNVR+AS +Q++ N+EI NIK+ LGLK    Y + K+LRYGHL
Sbjct: 568  AILDPDRIGVFPLRGKLLNVRDASVDQIMKNAEIQNIKQFLGLKHKQTYTDTKNLRYGHL 627

Query: 525  MIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIP 584
            MIM DQ                            DHDGSHIKGLLINF+   +PSLLKIP
Sbjct: 628  MIMADQ----------------------------DHDGSHIKGLLINFLQVQFPSLLKIP 659

Query: 585  SFLVEFITPIVKA-----TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTST 639
             F  EFITPIVK        K  ++ SF++ P+YE WKE      + W  KY+KGLGTS+
Sbjct: 660  DFFREFITPIVKVWQGPNPKKPQRLKSFFTQPEYEEWKEDHKNELTRWHSKYFKGLGTSS 719

Query: 640  SKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKY 699
            +++ + YF N+  H K+F     ++ + +ELAFSKKK +ARK+WL  F PG +LD   K 
Sbjct: 720  NEDAQVYFTNLDDHLKEFDTMKPEEADLLELAFSKKKADARKEWLGNFVPGTYLDHSTKS 779

Query: 700  IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVS 759
            I YSDF+N+ELILFSMAD  RSIPS++DG KPGQRK+++  FKRN +K+ KV + +GYVS
Sbjct: 780  ITYSDFINRELILFSMADNMRSIPSVLDGFKPGQRKVIYACFKRNLVKDKKVVELAGYVS 839

Query: 760  EHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSP 819
            E +AYHHGEQSL  TI+G+AQ+FVGSNNIN L+P+G FG+R  GG DAAS RY FTRLSP
Sbjct: 840  EQTAYHHGEQSLQQTIIGLAQNFVGSNNINCLEPSGNFGSRLAGGSDAASPRYTFTRLSP 899

Query: 820  ITRFLF-PKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRD 878
              R +F P D+  L+ +  EDG++IEP  Y PIIP VLVNG++GIGTGWS+ IPNY+P D
Sbjct: 900  FARKIFHPMDEPNLMHHY-EDGKKIEPMVYAPIIPMVLVNGADGIGTGWSTSIPNYHPMD 958

Query: 879  IVANVRRL--------LNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGII--EEVN 928
            IV N++R         L     E M PW+RG+ GT E          Y   GI    E  
Sbjct: 959  IVKNLKRRMGRLDDNDLEERPFETMMPWFRGWKGTPEVAGPDR----YKFNGIAYHNEQK 1014

Query: 929  ETTLRIKELPIRRWTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            +  + I ELPIR WT D++  LE II   D  ++I+ +++++D +TV FE+ + ++ M +
Sbjct: 1015 DNEVVITELPIRMWTDDFKGKLEKIIAGVDGPAWIKDYKEFNDHSTVHFEIAVDDKHMGK 1074

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
              +EG+L++FKLT  ++TSN+  FD++G+I+KY+  E ILEEF+  RL+ Y  RKK  L 
Sbjct: 1075 VLEEGVLERFKLTKQVATSNLVAFDTRGMIRKYEKVEDILEEFYLYRLDMYTDRKKHWLG 1134

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
                +  KL+N+ RFI  +++G++VV  +K+T L+ ELR   +  FP   +  +      
Sbjct: 1135 VFHADYRKLKNQARFIKEIIDGQLVVGKKKKTVLVQELRDCDYEAFPPGGEKKKTADEED 1194

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
             D  E  + + ++  G +  DYDYLLSM I +LT E+++ L    +K   E D+L   + 
Sbjct: 1195 DDADENQDVDGDLEGGAR--DYDYLLSMPIWSLTAERLEKLKQAIEKKKAEHDELLALSE 1252

Query: 1167 ESLWVKDLD 1175
            + LW +DLD
Sbjct: 1253 KDLWCRDLD 1261


>gi|358384566|gb|EHK22163.1| hypothetical protein TRIVIDRAFT_28551 [Trichoderma virens Gv29-8]
          Length = 1646

 Score = 1109 bits (2869), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1193 (48%), Positives = 776/1193 (65%), Gaps = 89/1193 (7%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E YQK +QLEHI+ RPDTYIGS+EK  Q +W+Y +ESK M +R I+YVPG YKIFDEILV
Sbjct: 120  ETYQKLTQLEHIIKRPDTYIGSVEKTDQQIWVYNKESKQMEYRNITYVPGFYKIFDEILV 179

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNKQRD  M+ +KV ID+    ISV N+G G+P+ +H++E VY+PELIFGHLL  SN
Sbjct: 180  NAADNKQRDSSMNMMKVNIDRATGEISVENNGKGIPIVMHEKEKVYIPELIFGHLLAGSN 239

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            +DDN KKT GGRNGYGAKL N+FSTEF +E  D +  K+YKQ++TNNM    +  I+  K
Sbjct: 240  FDDNEKKTVGGRNGYGAKLCNVFSTEFTLECQDSENGKRYKQLWTNNMQTMHKAKITSSK 299

Query: 209  EGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSF 267
              D + +V+FKPD A+F M   + DD+ AL+ +RV D+AG + + VKV+LNG  + +K F
Sbjct: 300  SSD-FVRVTFKPDYARFGMEEGITDDLEALLYRRVYDMAGTM-RGVKVQLNGELIKIKDF 357

Query: 268  AEYVDMYPKSVTRFHERVNE------------------RWEICVTLSEGQFQQVSFVNGI 309
              Y D+Y KS+    ER  E                  RWE+  T+S+G FQQVSFVN I
Sbjct: 358  KAYCDLYAKSIA--GERSMEEGGNPTCTVEIDKDKGHPRWEVGFTVSDGTFQQVSFVNSI 415

Query: 310  ATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTK 369
            AT  GGTHV+YVA+Q+  +++  V K  K   +K  +++NH+++FVN L+DNPAF SQTK
Sbjct: 416  ATTSGGTHVNYVADQITAYLLKAVTKLRKGHGLKQAHLRNHIFIFVNCLVDNPAFTSQTK 475

Query: 370  ETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGI 429
            E +T + S FGSKC L E+FLKKV AKS  ++ ++ +A  K  K + K+DG K   V   
Sbjct: 476  EQMTTKASQFGSKCVLGEDFLKKV-AKSDAIKNIMDFAERKADKMMAKSDGNKRSRVSN- 533

Query: 430  SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS 489
            +KL +ANLAG R   +CTLILTEGDSAK LA++G +++  DR GVFPLRGKLLNVR+AS 
Sbjct: 534  AKLVEANLAGTRRGHECTLILTEGDSAKGLAVSGRAILDPDRIGVFPLRGKLLNVRDASI 593

Query: 490  NQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
            +Q+  N EI NIK+ LGLK    Y + KSLRYGHLMIM DQ                   
Sbjct: 594  DQITKNQEIQNIKQFLGLKHKQVYTDTKSLRYGHLMIMADQ------------------- 634

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA-----TNKNGKV 604
                     DHDGSHIKGLLINF+   +PSLL+IP F  EFITPIVK        K  ++
Sbjct: 635  ---------DHDGSHIKGLLINFLQVQFPSLLQIPDFFREFITPIVKVWQGPNPKKPQRL 685

Query: 605  LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD 664
             SF++ P YE WKE  G   S W  KY KGLG+S++++ + YF N+  H K+F     ++
Sbjct: 686  KSFFTQPQYEEWKEERGSEISRWHYKYLKGLGSSSNEDAQVYFTNLDEHLKEFDVMKPEE 745

Query: 665  GEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPS 724
             +  +LAFSKKK +ARK+WL  F PG +LD   K I YSDFVNKELILFSMAD  RSIPS
Sbjct: 746  ADMFDLAFSKKKADARKEWLGNFVPGTYLDHSSKTISYSDFVNKELILFSMADNIRSIPS 805

Query: 725  MVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVG 784
            M+DGLKPGQRK+L+  FKRN +K+ KV + +GYVS  +AYHHGE SL  TI+G+AQDFVG
Sbjct: 806  MIDGLKPGQRKVLYACFKRNVVKDEKVVELAGYVSGLTAYHHGEVSLQQTIIGLAQDFVG 865

Query: 785  SNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIE 844
            SNNIN+L+P+G FG+R  GG DAAS RY FTRLSP  R +F   D+  L +  EDG+QIE
Sbjct: 866  SNNINVLEPSGNFGSRLAGGSDAASPRYTFTRLSPFARSIFSSLDEPNLSHQYEDGKQIE 925

Query: 845  PTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM---------MEPM 895
            P  Y PI+P VL+NG++GIGTGWS+ IPNY+P ++V N++R + G +          E M
Sbjct: 926  PEIYAPILPMVLINGADGIGTGWSTSIPNYHPLEVVKNLKRRM-GRLEEGDDEEKPFETM 984

Query: 896  HPWYRGFGGTIEKTASKEAGVTYTVTGII--EEVNETTLRIKELPIRRWTQDYREFLESI 953
             PW+RG+ GT E          Y   GI    E N   + I ELPIR WT D++  LE I
Sbjct: 985  TPWFRGWKGTPEAAGPDR----YKFNGIAYQNEQNANEVVITELPIRVWTDDFKARLEKI 1040

Query: 954  IDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFD 1011
            I   D  S+I+ +++++D  TV FE+ + E+ M +  +EGLL++FKLT  ++TSN+  FD
Sbjct: 1041 ISGVDGPSWIKDYKEFNDHKTVHFEIQVDEKHMAKVLEEGLLERFKLTKQVATSNLVAFD 1100

Query: 1012 SKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIV 1071
            ++G I+KY+  E ILEE++  RLE Y KRK   L   + +  KL+N+ RFI  +++G+++
Sbjct: 1101 TRGRIRKYEKVEDILEEYYIYRLEMYLKRKNHWLSVYDADHRKLKNQARFIQEIIDGDLI 1160

Query: 1072 VNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEESEENPEVVNGVQSID 1127
            V  +K+  L+ ELR + +  FP     N+K  +       ++ E +E          + D
Sbjct: 1161 VGKKKKAILVKELRDRKYEAFPPVKNNNTKKTQEEEEEEDEDDEGAE---------SARD 1211

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQ 1180
            +DYLLSM I +LT E+++ L     +   E D+L   + + LW +DL A + +
Sbjct: 1212 FDYLLSMPIWSLTAERLEKLKDAIRRKKAEYDELEAKSDKDLWCEDLTAFEAE 1264


>gi|146414654|ref|XP_001483297.1| hypothetical protein PGUG_04026 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1400

 Score = 1109 bits (2868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 598/1329 (44%), Positives = 834/1329 (62%), Gaps = 119/1329 (8%)

Query: 6    RLPLTTSNNANVVGPTAP-NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEE 64
            ++PL  S N     P+AP      + YQK SQLEHIL RPDTYIGS+EK    +W ++  
Sbjct: 34   KVPLRDSTNT-TAQPSAPATGDASDQYQKLSQLEHILKRPDTYIGSVEKTGVEMWSFDAA 92

Query: 65   SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
            +++MI++ +  VPGLYKIFDEILVNAADNK RDP M  +KV ID E++ I V N G G+P
Sbjct: 93   TESMIYKEVHIVPGLYKIFDEILVNAADNKIRDPSMRNIKVNIDAENNTILVMNDGKGIP 152

Query: 125  VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
            +EIH++E +Y+PELIFG+LLTSSNYDD+ KK TGGRNGYGAKL NIFSTEF++ETAD   
Sbjct: 153  IEIHKKEKIYIPELIFGNLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFVLETADLNT 212

Query: 185  LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
             + YKQ +TNNM   ++P I+K K    +TKV+FKPDL+KF+M  L+DD+++++++RV D
Sbjct: 213  SQVYKQTWTNNMANLTKPKITKLKSKKEYTKVTFKPDLSKFHMEMLDDDILSVLRRRVYD 272

Query: 245  LAGCLGKSVKVELNGHRVPVKSFAEYVDMY-------------PKSVTR-----FHERVN 286
            L G + K   + LN  ++ +++F  YV+MY             P+  TR      HE  N
Sbjct: 273  LCGTV-KDCNIYLNDKKLSIRNFKSYVEMYVNAIRERSPDPVAPEGETRNYSTIVHEVFN 331

Query: 287  ERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA---NVK 343
            +RWE+   +S+G F QVSFVN IAT  GGTHV YV++Q+   ++  + KK K     N+K
Sbjct: 332  DRWEVAFAVSDGSFNQVSFVNSIATTSGGTHVKYVSDQIITKLIDALTKKEKGKKKLNIK 391

Query: 344  AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS----KCELSEEFLKKVTAKSGI 399
               V+N+++VF+N LI+NPAF SQTKE LT R + FG     K  +S++F+ K+  K+ I
Sbjct: 392  PQEVRNNMFVFINCLIENPAFTSQTKEQLTTRVAQFGGKPLEKIVISDQFIAKI-LKTSI 450

Query: 400  VETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKAL 459
             + + +  N  + K++ K DG++   ++   KL DAN AG +   +CTLILTEGDSA  L
Sbjct: 451  ADKIRTIVNANEDKEMLKADGSRKSRIKNQVKLVDANKAGTKEGYKCTLILTEGDSAMPL 510

Query: 460  AMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVK 517
            A+AGL+VVGRD +G FPLRGKLLNVREAS  QV  N+EI +IK+I+GL+    Y   N+K
Sbjct: 511  AVAGLTVVGRDYYGCFPLRGKLLNVREASIEQVSKNAEINSIKQIMGLQHKKRYTPENIK 570

Query: 518  SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFW 577
            SLRYGH+MIMTD                            QD DGSHIKGL+INF+ + +
Sbjct: 571  SLRYGHIMIMTD----------------------------QDQDGSHIKGLIINFLETSF 602

Query: 578  PSLLKIPSFLVEFITPIVKAT---NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKG 634
            P LL+IP FL+EFITPIVK T     N +V+ FY+MP++E W+E+  G    W  KY+KG
Sbjct: 603  PGLLEIPGFLLEFITPIVKVTITGRGNHRVIPFYNMPEFEKWRET-EGTTCKWKHKYFKG 661

Query: 635  LGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLD 694
            LGTS   EG+EYF  +  H K F    D D + I++AFSKKK + RK WL  F PG HLD
Sbjct: 662  LGTSLESEGREYFAALDRHMKSFHALQDGDSQYIDMAFSKKKADERKDWLQAFRPGTHLD 721

Query: 695  QKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQF 754
             + + I  S+F+NKELILFSMAD  RSIPS++DG KPGQRK+L+  FKRN   E KVAQ 
Sbjct: 722  PQIREIPISEFINKELILFSMADNVRSIPSILDGFKPGQRKVLYGCFKRNLRSEIKVAQL 781

Query: 755  SGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIF 814
             GY+SEH+ YHHGE SLA TI+G+AQ+FVG+NN+NLLQP G FG+R  GGKD ++ RYI 
Sbjct: 782  VGYISEHTGYHHGEGSLAQTIVGLAQNFVGANNLNLLQPIGLFGSRAAGGKDFSAVRYIH 841

Query: 815  TRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNY 874
            T ++ +TR +F   DD L  Y+ +D Q +EP  Y+PIIP +LVNG+EGIGTGWS+ IP++
Sbjct: 842  TNITDLTRVIFNPLDDDLYTYVQDDAQTVEPEAYLPIIPMLLVNGAEGIGTGWSTNIPSF 901

Query: 875  NPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRI 934
            NP DIVAN+RR++NGE    M PW++G+ G +E+ + ++    Y V G IE+V++ T+ I
Sbjct: 902  NPVDIVANIRRMMNGEEPVDMTPWFKGWEGDLERISPEK----YKVLGKIEQVDDDTVEI 957

Query: 935  KELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLK 994
             E+PI+ WT   +EFL + +  +  +I+   +      + F V L +E M ++ + GLL+
Sbjct: 958  TEIPIKTWTNSVKEFLLAGLGNDKPWIKDMEE-QHGINIRFVVRLLKEEMDKSLRMGLLE 1016

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
            +FKL ++IS SNM  FD +G IKKY +  +IL++++  RLE Y++RK +  EN + +L +
Sbjct: 1017 RFKLISSISLSNMVAFDPQGRIKKYSSANEILKDYYWARLELYQRRKDMMAENFQNQLTR 1076

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSI--EAVVA-------- 1104
            L  + RFI  ++  ++ + N+KR +++ +L++  FT F KN K +  E +V         
Sbjct: 1077 LSEQARFIKLIIEKKLTIANKKRLEMVDDLKKLKFTRFNKNGKPVHDEPLVEAEELAEEE 1136

Query: 1105 ------------GATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRD 1152
                        G     +ES+  PE         YDYLL MAI +LT E+ + LL  RD
Sbjct: 1137 EEAAGDISQLNLGLVAPEDESQYKPETTYS----QYDYLLGMAIWSLTRERYEKLLRQRD 1192

Query: 1153 KLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVA 1212
            +  EE+++L K + + LW  DLD   +  +E  ++D  A               GP    
Sbjct: 1193 EKQEELNELLKKSAKDLWNSDLDDFLVGWEEFLRADIEAR-----------NSFGPT--- 1238

Query: 1213 KRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKA---PAEKLDDDEEDEV 1269
              A  + RK  +KS  +   +        TK   PK      KA   PA+ +  +E ++ 
Sbjct: 1239 --AKTSTRKRARKSTKSEPAQKK------TKSSTPKASTPTIKAEATPAQPVVKEETNKQ 1290

Query: 1270 PDLKQRLAK 1278
            PDL    +K
Sbjct: 1291 PDLLSFFSK 1299


>gi|3786306|dbj|BAA33955.1| TopoisomeraseII [Candida glabrata]
          Length = 1406

 Score = 1108 bits (2865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 575/1209 (47%), Positives = 791/1209 (65%), Gaps = 85/1209 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT  E YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI +T++ VPGL+KIFD
Sbjct: 5    KTASERYQKISQLEHILKRPDTYIGSVEIQEQEQWIYDEETDCMIDKTVNIVPGLFKIFD 64

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP M  + V I+ E + I V N G G+P+EIH++E +Y+PELIFGHLL
Sbjct: 65   EILVNAADNKVRDPSMKRIDVTINPEENFIEVRNDGKGIPIEIHEKEKIYIPELIFGHLL 124

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ KK TGGRNGYGAKL NIFSTEF +ETAD K  +KY Q + NNM     P I
Sbjct: 125  TSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFTLETADPKNGRKYVQTWENNMNVCHPPKI 184

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +  K+  ++TKV+FKPDL++F M  L+ D++ +M++RV D+ G + + V V LNG  + +
Sbjct: 185  TSYKKVPSYTKVAFKPDLSRFGMESLDSDILGVMRRRVYDINGSV-RDVNVYLNGKPLKI 243

Query: 265  KSFAEYVDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSF 305
            ++F  YV++Y KS+                   T  +ERV++RWEI   +S+  F+QVSF
Sbjct: 244  RNFKNYVELYLKSLEKMRKMDNGESDTTPSNIPTILYERVSDRWEIAFAVSDISFKQVSF 303

Query: 306  VNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFD 365
            VN IAT  GGTHV+Y+A+Q+   V  ++  K K  N+K + +KN++++F+N LI+NPAF 
Sbjct: 304  VNSIATTTGGTHVNYIADQIVRKVSDIL--KKKKKNIKPYQIKNNMFIFINCLIENPAFT 361

Query: 366  SQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED 425
            SQTKE LT R   FGS+C++S +++ K+  K+ +   +   A+   +  LKK+DG++   
Sbjct: 362  SQTKEQLTTRVKDFGSRCDISSDYINKI-MKTDLATKIFEIADENANNALKKSDGSRKSR 420

Query: 426  VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
            +    KLEDAN AG ++  +CTLILTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVR
Sbjct: 421  ITDYPKLEDANKAGTKDGYKCTLILTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVR 480

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
            EA+++Q+L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                
Sbjct: 481  EATADQILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD---------------- 524

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN--GK 603
                        QDHDGSHIKGL+INFI + +P LL IP FL+EFITPIVK T      K
Sbjct: 525  ------------QDHDGSHIKGLIINFIETSFPGLLDIPGFLIEFITPIVKVTITKPIKK 572

Query: 604  VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
            V+SF+++PDYE W+E    +  SW  KYYKGLGTSTS E  EYF N+  H K F      
Sbjct: 573  VISFFNLPDYEKWREE-ESHKYSWKQKYYKGLGTSTSPEIIEYFSNLDTHLKKFHALQGD 631

Query: 664  DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIP 723
            D + I+LAFSKKK + RK+WL Q+EPG  LD     I  SDF+NKELILFS+AD   SIP
Sbjct: 632  DKDLIDLAFSKKKADDRKEWLRQYEPGTVLDPTLNEIPISDFINKELILFSLADNVSSIP 691

Query: 724  SMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFV 783
            S++DG KPGQRK+L+  FK+N   E KVA  +  VS+++AYHHGEQ+L  TI+GMAQ+FV
Sbjct: 692  SVLDGFKPGQRKVLYTCFKKNLTTEKKVANLAPAVSDYTAYHHGEQALVQTIIGMAQNFV 751

Query: 784  GSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQI 843
            G+NNI  L+PNG FGTR  GGKDAA+ARYI+T L+ I R +F   DD L  Y+ ED + +
Sbjct: 752  GTNNIYFLKPNGAFGTRATGGKDAAAARYIYTELNKIARKVFHPADDPLFRYVQEDEKTV 811

Query: 844  EPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFG 903
            EP WY+P++P VL+NG+EGIGTGWS+ IP +NP D+V N+R LLN E M+ MHPW+RG+ 
Sbjct: 812  EPEWYLPVVPMVLINGAEGIGTGWSTSIPPFNPLDVVNNIRHLLNDEEMDDMHPWFRGWT 871

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---F 960
            GT+EK  S+     Y + G IE+V   TL I ELP R WT   +E L   +  ++    +
Sbjct: 872  GTMEKIESQR----YRMYGRIEQVGPNTLEITELPARTWTSTIKEHLLLGLGGSEKVKPW 927

Query: 961  IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYD 1020
            I+   +   + T+ F + L++E M +T++ G  ++FKL + IS  NM  FD +G IKKYD
Sbjct: 928  IKDMEEQHAE-TIKFIIKLTDEEMTKTRKLGFYERFKLISPISLQNMVAFDYRGKIKKYD 986

Query: 1021 TPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDL 1080
               +IL++F+ +RLE+Y+KRK      L+ E  KL  +V+FI  +++  ++V N+ +  L
Sbjct: 987  HVHEILKDFYEVRLEYYQKRKDYMTGRLQWEAEKLSFQVKFIKMIIDKSLIVTNKPKKQL 1046

Query: 1081 LLELRQKGF--------TPFPKNSKSIEAVV-----------AGATDETEESEENPEVVN 1121
            + EL + GF          F K  + +EA++             AT + ++ +E+   VN
Sbjct: 1047 ISELEELGFPRINKEGKPHFGKIDEEVEAIISEDEDEDLEESEEATRKKDKDDES--TVN 1104

Query: 1122 GVQSI--DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
            G + +   Y+YLL + I +LT E+ + LL  + +   E+++L K + + LW  DLD    
Sbjct: 1105 GPEELFGTYEYLLGLKIWSLTKERYEKLLKQKQEKETELENLLKLSAKDLWNNDLDDFLT 1164

Query: 1180 QLDELDKSD 1188
              ++  K D
Sbjct: 1165 AYEDFQKMD 1173


>gi|400603233|gb|EJP70831.1| topoisomerase IV [Beauveria bassiana ARSEF 2860]
          Length = 1602

 Score = 1108 bits (2865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 583/1241 (46%), Positives = 796/1241 (64%), Gaps = 91/1241 (7%)

Query: 7    LPLTTSNNANVV-----GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIY 61
            +PL    N ++V      P    K+  E YQK +QLEHI+ RPDTYIGS+E   Q +W+Y
Sbjct: 86   VPLAELENDSMVVDSTPKPAGKKKSATETYQKLTQLEHIIKRPDTYIGSVESTEQQMWVY 145

Query: 62   EEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGD 121
             +E++ M ++TIS+VPG +KIFDEI+VNAAD KQR   M  +KV ID+E   ISV N+G 
Sbjct: 146  NKEAQLMEYKTISFVPGFFKIFDEIMVNAADVKQRHASMTYIKVNIDRESGQISVENNGK 205

Query: 122  GVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 181
            G+PVE+H +E +Y+PELIFGHLL  SN+DD  KKT GGRNGYGAKL N+FSTEF +E  D
Sbjct: 206  GIPVEMHDKEKIYIPELIFGHLLAGSNFDDEEKKTVGGRNGYGAKLCNVFSTEFNLECQD 265

Query: 182  GKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKK 240
                K+YKQ +T+NM K  +  I+  K  D + +++F PD  +F M+  ++DD+ +L+ +
Sbjct: 266  STNGKRYKQTWTDNMSKMGKAKITSNKTSD-FVRITFMPDYKRFGMSDGIDDDLESLLYR 324

Query: 241  RVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE------------- 287
            RV DLAG + + +KV LNG  + + +F  Y D+Y KS+ +  ERV E             
Sbjct: 325  RVYDLAGTI-RGIKVHLNGEVIKIPTFKAYCDLYAKSIAK--ERVAEEGGNPTCNVEIDK 381

Query: 288  -----RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANV 342
                 RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+Q+   ++  +NK+ K   +
Sbjct: 382  EKTHPRWEVGFAVSDGTFQQVSFVNNIATTSGGTHVNYIADQITASLLKTLNKRKKGHTL 441

Query: 343  KAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVET 402
            K  +++NH+++F+N  IDNPAF SQTKE +T + S FGSKC L E+FLKK+ A+S  V+ 
Sbjct: 442  KQSHLRNHIFIFINCFIDNPAFTSQTKEQMTTKASLFGSKCVLGEQFLKKI-AQSEAVQN 500

Query: 403  LLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMA 462
            ++ +A  K  K + K+DG+K   V   +KL +ANLAG R   +CTLILTEGDSAK LA++
Sbjct: 501  IMDFAEKKADKMMAKSDGSKRSRVSN-AKLVEANLAGSRRGHECTLILTEGDSAKGLAVS 559

Query: 463  GLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYG 522
            G +++  DR GVFPLRGKLLNVR+AS +Q+  N EI NIK+ LGLK    Y + KSLRYG
Sbjct: 560  GRAILDPDRIGVFPLRGKLLNVRDASIDQITKNQEIQNIKQFLGLKHKQNYTDTKSLRYG 619

Query: 523  HLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK 582
            HLMIM DQ                            DHDGSHIKGLLINF+   +PSLL+
Sbjct: 620  HLMIMADQ----------------------------DHDGSHIKGLLINFLQVQFPSLLQ 651

Query: 583  IPSFLVEFITPIVKA-----TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGT 637
            IP F  EF+TPI+K        K  K+ +F++ P++  WKES     S W  KY KGLG+
Sbjct: 652  IPDFFREFVTPIMKVWQGSDPKKPTKLQTFFTQPEFSEWKESHKHELSRWHSKYLKGLGS 711

Query: 638  STSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKE 697
            S++++ + YF N+  H K+F     ++ +  +LAFSKKK +ARK+WL  F PG +LD   
Sbjct: 712  SSNEDAQVYFTNLDKHLKEFEVMQPEEAQLFDLAFSKKKADARKEWLGNFVPGTYLDHGT 771

Query: 698  KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
            K I Y+DFVNKELILFSMAD  RSIPS+ DGLKPGQRK+LF  FK+N  K+ KV + +GY
Sbjct: 772  KAITYTDFVNKELILFSMADNMRSIPSIADGLKPGQRKVLFSCFKKNVTKDKKVVELAGY 831

Query: 758  VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
            +SE SAYHHGEQSL  TI+G+AQ FVGSNNINLL+P+G FG+R  GG DAAS RYI TRL
Sbjct: 832  ISEQSAYHHGEQSLQQTIIGLAQTFVGSNNINLLEPSGNFGSRLAGGSDAASPRYISTRL 891

Query: 818  SPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPR 877
            SP  R ++  +D+  L    +D   IEP  Y PIIP +LVNG++GIGTGWS+ IPNY+P 
Sbjct: 892  SPFARKIYLAEDEPNLKQQYDDSNVIEPEVYTPIIPMILVNGADGIGTGWSTSIPNYHPT 951

Query: 878  DIVANVRRLLNGEM---------MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGII--EE 926
            DIV N++R + G +          EPM PW+RG+ GT E          Y   GI    +
Sbjct: 952  DIVKNLKRRM-GRLNLAEEEELPFEPMMPWFRGWKGTPEAAGPDR----YKFNGIAYQND 1006

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIID--QNDSFIRGFRQYSDDTTVDFEVFLSEESM 984
             N   + I ELPIR WT D++  LE II   +  ++I+ +++++D  TV FE+ + E+ M
Sbjct: 1007 QNPNEVVITELPIRVWTDDFKTKLEKIISGTEGPAWIKDYKEFNDHNTVHFEIMVDEKFM 1066

Query: 985  MRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQ 1044
             +  +EGLL++FKL   ++TSN+  FD +G I+KYD  E I+EEF+H RL+ Y +RKK  
Sbjct: 1067 PKVLEEGLLERFKLQKQVATSNLVAFDMQGRIRKYDKVEDIMEEFYHYRLDMYSERKKYW 1126

Query: 1045 LENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK---GFTPFPKNSKSIEA 1101
            L     +  KL+N+ RF+  +++G +VV  +K+  L+ ELR++   GF P    +K+ E 
Sbjct: 1127 LNVYHRDYRKLKNQARFVQEIISGVLVVGKKKKQALVTELRERKYEGFPPSKPGAKAEEE 1186

Query: 1102 VVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
             +  A+D  ++S    +      S DYDYLLSMAI +LT E++Q LL    K   E D+L
Sbjct: 1187 ELGNASDADDDSSGALD----AGSKDYDYLLSMAIWSLTAERLQKLLDAIAKKKAEHDEL 1242

Query: 1162 RKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNG 1202
            +  + + LW +DLDAL   + E DK  A   E + KI+  G
Sbjct: 1243 QAKSEKDLWCEDLDAL---MAEWDKQVAIDAEIQTKIRRLG 1280


>gi|170575369|ref|XP_001893211.1| DNA topoisomerase II, alpha isozyme [Brugia malayi]
 gi|158600906|gb|EDP37957.1| DNA topoisomerase II, alpha isozyme, putative [Brugia malayi]
          Length = 1511

 Score = 1107 bits (2864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 591/1223 (48%), Positives = 812/1223 (66%), Gaps = 120/1223 (9%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQA-LWIYEEESKTMIHRTISYVPGLYKIFD 84
            +IE++YQKKSQLEHILLRPDTYIGS+E   +  +W+Y+ E+  ++ R ISYVPGLYKIFD
Sbjct: 72   SIEKIYQKKSQLEHILLRPDTYIGSVEYTDRTPMWVYDTETDRILQREISYVPGLYKIFD 131

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRDPKM+ +KV I++E + IS++N+G G+PV +H+ E +YVPELIFG LL
Sbjct: 132  EILVNAADNKQRDPKMNLIKVNINKEKNEISIYNNGRGIPVVLHKIEKLYVPELIFGTLL 191

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ +K TGGRNGYGAKL NIFS EF +ET+  +  K +KQ + NNM K  EP I
Sbjct: 192  TSSNYDDSERKVTGGRNGYGAKLCNIFSKEFTLETSTNEYGKAFKQTWVNNMSKDGEPKI 251

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +   + D +T+V+F+PDLAKF MT L+DD+VALM +R  D+AG   + VKV LN  ++PV
Sbjct: 252  TTSSKED-FTRVTFRPDLAKFKMTELDDDIVALMCRRAYDIAGST-RGVKVFLNNKQIPV 309

Query: 265  KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            + F +Y++ Y K        +    +E V+ RWE+ +T+S+  FQQVSF N IAT KGG 
Sbjct: 310  QGFKQYIEQYVKHNVDSNGEAYKVVYESVSPRWEVALTISDKGFQQVSFTNSIATTKGGR 369

Query: 317  HVDYVANQVANHVMAVVNKK---NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            HVDYV +Q+A+ ++ V+ KK   +   NVK   +KNH+W+FVNALI+NP FDSQTKET+T
Sbjct: 370  HVDYVVDQIASKLIDVIKKKIGKSGGINVKPFQIKNHMWIFVNALIENPTFDSQTKETMT 429

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLE 433
            L+  SFGS CELSE+F++    K GIVE +++W                     G+ KLE
Sbjct: 430  LQSKSFGSTCELSEKFIQ-AAMKCGIVEAIMAW---------------------GVPKLE 467

Query: 434  DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            DAN AG +NS QCTLILTEGDSAK+LA++GL VVGRD++GVFPLRGK+LNVRE +  Q++
Sbjct: 468  DANDAGTKNSAQCTLILTEGDSAKSLAVSGLGVVGRDKYGVFPLRGKMLNVREGNHKQIM 527

Query: 494  NNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
             N+E+  + KI+GL+  ++Y+   ++K+LRYG +M+M DQ                    
Sbjct: 528  ENAEVNALLKIIGLQYRLKYDKDEDMKTLRYGKVMVMADQ-------------------- 567

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                    D DGSHIKGL+INFIH  WP+L++  +F+ EFITPIVKAT K  + +SF+S+
Sbjct: 568  --------DQDGSHIKGLVINFIHYNWPALVR-RNFVEEFITPIVKAT-KGKEEISFFSL 617

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P+Y  W  +   N  ++ IKYYKGLGTSTSKE KEYF ++  H+  F +  ++D +A+++
Sbjct: 618  PEYREWLNNTE-NWKTYRIKYYKGLGTSTSKEAKEYFMDMRRHRIQFKYSGEEDDQALDM 676

Query: 671  AFSKKKIEARKKWLLQF--------EPG---NHLDQKEKYI-KYSDFVNKELILFSMADL 718
            AFSKKK+E RK WL  +        E G    +L  K  Y+  + DFVNKEL+LF   D 
Sbjct: 677  AFSKKKVEERKIWLTNWMAERRNRREDGLTEEYLYDKNTYVVSFKDFVNKELVLFLNCDN 736

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
            +RSIPS+VDGLKPGQRK+LF  FKR   KE KVAQ +G V E SAYHHGE SL STI+ +
Sbjct: 737  ERSIPSLVDGLKPGQRKVLFTCFKRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVNL 796

Query: 779  AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
            AQDFVGSNNINLL P GQFGTR QGGKD+AS RYIFT+L+P+T+ LFP  D+ +L +L E
Sbjct: 797  AQDFVGSNNINLLLPIGQFGTRLQGGKDSASPRYIFTQLNPVTKALFPSIDENVLRFLFE 856

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPW 898
            + Q+IEP WY P+IPTVLVNG+EGIGT WS+ +P YNPR+IV N+R L++G+  +P+ PW
Sbjct: 857  ENQKIEPEWYCPVIPTVLVNGAEGIGTAWSTKVPCYNPREIVDNMRALIDGKEPKPLIPW 916

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQN 957
            Y+ F GTIE+   +     +   G +  +N  T+ I ELPIR WTQ Y+E  L  ++D N
Sbjct: 917  YKHFRGTIEQLDDQR----FVCNGEVAVINNETIEITELPIRTWTQTYKETVLVPMMDGN 972

Query: 958  D---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM---H--- 1008
            D   +FI  F++Y  DTTV F + ++ + +  +K+EGL K FKL T I+T++M   H   
Sbjct: 973  DKQPAFITDFKEYHTDTTVKFVIKMNGDKLRASKEEGLHKVFKLQTVINTTSMVYEHYSR 1032

Query: 1009 ----LFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILG 1064
                LFD  G +++++    I +EFF IR + Y +RK  Q   L  +  +L N+ RFIL 
Sbjct: 1033 VCQVLFDPFGYLRRFENVTDICKEFFEIRKKKYIERKSFQEGLLRAQSERLSNQARFILA 1092

Query: 1065 VVNGEIVVNNRKRTDLLLELRQKGFTPFP-----KNSKSIEAVVAG----------ATDE 1109
             + GEI++ N+++  ++ +L +  F P P     +  K  E +++G            + 
Sbjct: 1093 KIKGEILIENKRKAAIVEQLIKMSFKPDPVKKWKEERKKQELIMSGEITQDEDEEEQEEN 1152

Query: 1110 TEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESL 1169
             E++ ++ E+ N +   DYDYL+ MAI  L+ E+   LL + +    E+  L + T   L
Sbjct: 1153 EEDAYQSKELANKLS--DYDYLVGMAILKLSEEEKDKLLRESEAKLIELKSLEEMTWADL 1210

Query: 1170 WVKDLDALDMQLDELDKSDARAE 1192
            W  DL+     L EL+K +A+ +
Sbjct: 1211 WNNDLNCF---LAELEKQEAKEQ 1230


>gi|358393929|gb|EHK43330.1| hypothetical protein TRIATDRAFT_225747 [Trichoderma atroviride IMI
            206040]
          Length = 1677

 Score = 1107 bits (2863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/1196 (48%), Positives = 777/1196 (64%), Gaps = 80/1196 (6%)

Query: 20   PTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGL 79
            P    KT  E YQK +QLEHI+ RPDTYIGS+EK  Q +W+Y +ESK M +R I+YVPG 
Sbjct: 110  PAGKKKTATETYQKLTQLEHIIKRPDTYIGSVEKTDQQMWVYNKESKQMEYRNITYVPGF 169

Query: 80   YKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELI 139
            YKIFDEILVNAADNKQRD  M  +KV ID+    ISV N+G G+P+ +H++E VY+PELI
Sbjct: 170  YKIFDEILVNAADNKQRDSSMSMMKVNIDRTSGEISVENNGKGIPIVMHEKEKVYIPELI 229

Query: 140  FGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
            FGHLL  SN+DDN KKT GGRNGYGAKL N+FSTEF +E  D +  K+YKQ +T+NM   
Sbjct: 230  FGHLLAGSNFDDNEKKTVGGRNGYGAKLCNVFSTEFTLECQDSEHAKRYKQTWTDNMQAM 289

Query: 200  SEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELN 258
             +  I+  K  D + +V+FKPD  +F M   + DD+ AL+ +RV DLAG + + VKV+LN
Sbjct: 290  QKAKIASNKTSD-FVRVTFKPDYRRFGMEEGITDDLEALLYRRVYDLAGTM-RGVKVQLN 347

Query: 259  GHRVPVKSFAEYVDMYPKSVT--RFHE--------------RVNERWEICVTLSEGQFQQ 302
            G  + + +F  Y D+Y KS+   R  E              + + RWE+  T+S+G FQQ
Sbjct: 348  GELIKINNFKAYCDLYAKSIAGERGQEEGGNPTCTVEIDKDKSHPRWEVGFTVSDGTFQQ 407

Query: 303  VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNP 362
            VSFVN IAT  GGTHV Y+A+Q+   ++  V K  K   +K  +++NH+++FVN  IDNP
Sbjct: 408  VSFVNSIATTSGGTHVSYIADQITASLLKAVTKLKKGHGLKPAHLRNHIFIFVNCFIDNP 467

Query: 363  AFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
            AF SQTKE +T + S FGS+C L E+FLKKV AKS  ++ ++++A  K  K + K+DG K
Sbjct: 468  AFTSQTKEQMTTKTSQFGSRCVLGEDFLKKV-AKSDAIQNIMAFAEKKADKMMAKSDGNK 526

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
               V   +KL +ANLAG R   +CTLILTEGDSAK LA++G +++  DR GVFPLRGKLL
Sbjct: 527  RSRVSN-AKLVEANLAGTRRGHECTLILTEGDSAKGLAVSGRAILDPDRIGVFPLRGKLL 585

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            NVR+AS +Q+  N EI NIK+ LGLK    Y + K+LRYGHLMIM DQ            
Sbjct: 586  NVRDASIDQITKNQEIQNIKQFLGLKHKQTYTDTKNLRYGHLMIMADQ------------ 633

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA----- 597
                            DHDGSHIKGLLINF+   +PSLL+IP F  EFITPIVK      
Sbjct: 634  ----------------DHDGSHIKGLLINFLQVQFPSLLQIPDFFREFITPIVKVWQGPN 677

Query: 598  TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDF 657
              K  ++ SF++ P YE WK+  GG  S W  KY KGLGTST+++ + YF N+  H K+F
Sbjct: 678  PKKPQRLKSFFTQPQYEEWKQERGGEVSRWHYKYLKGLGTSTNEDAQVYFTNLDEHLKEF 737

Query: 658  VWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMAD 717
                 ++ +  +LAFSKKK +ARK+WL  F PG +LD   K I YSDFVNKELILFSMAD
Sbjct: 738  SVMKPEEADLFDLAFSKKKADARKEWLGGFVPGTYLDHSSKLITYSDFVNKELILFSMAD 797

Query: 718  LQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
              RSIPSM+DGLKPGQRK+L+  FKRN +K+ KV + +GYVS  +AYHHG+ SL  TI+G
Sbjct: 798  NIRSIPSMIDGLKPGQRKVLYACFKRNVVKDEKVVELAGYVSGLTAYHHGDISLQQTIVG 857

Query: 778  MAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLN 837
            +AQDFVGSNNIN+L+P+G FG+R  GG D+AS RYIFTRLSP  R +F   D+  L++  
Sbjct: 858  LAQDFVGSNNINVLEPSGNFGSRLAGGSDSASPRYIFTRLSPFARAIFSSLDEPSLNHQF 917

Query: 838  EDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM------ 891
            EDG+QIEP  + P++P VLVNG++GIGTGWS+ IPNY+P +IV N++R + G +      
Sbjct: 918  EDGKQIEPEVFAPVLPMVLVNGADGIGTGWSTSIPNYHPLEIVKNLKRRM-GRLEEDDSE 976

Query: 892  ---MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGII--EEVNETTLRIKELPIRRWTQDY 946
                E M PW+RG+ G  E          Y   GI   +E N   + I ELPIR WT D+
Sbjct: 977  EKPFETMTPWFRGWKGAPEAAGQDR----YKFNGIAYQDEKNPNEVVITELPIRVWTDDF 1032

Query: 947  REFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTIST 1004
            +  LE II   D  ++I+ +++++D  TV FE+ + E+ M +  +EGLL++FKLT  ++T
Sbjct: 1033 KARLEKIISGVDGPTWIKDYKEFNDHKTVHFEIQVDEKHMAKVLEEGLLERFKLTKQVAT 1092

Query: 1005 SNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILG 1064
            SN+  F+++G I+KY+  E ILEE++  RLE Y+KRK   L   + +  KL+N+ RFI  
Sbjct: 1093 SNLVAFNTRGQIRKYEKVEDILEEYYVYRLEMYQKRKDHWLGVYDADHRKLKNQARFIQE 1152

Query: 1065 VVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQ 1124
            +++G+++V  +K+T L+ ELR   +  FP         V     ++ E EE+ E      
Sbjct: 1153 IIDGDLIVGKKKKTVLVKELRDHKYEAFPP--------VKNNMKKSTEEEEDEEEDGEES 1204

Query: 1125 SIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQ 1180
            + DYDYLLSM I +LT E+++ L     K   E D+L   + + LW +DL   + +
Sbjct: 1205 ARDYDYLLSMPIWSLTAERLEKLKEAIRKKKAEYDELNAKSDKDLWCEDLAGFEAE 1260


>gi|256083186|ref|XP_002577830.1| DNA topoisomerase II [Schistosoma mansoni]
          Length = 1599

 Score = 1107 bits (2863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 589/1204 (48%), Positives = 801/1204 (66%), Gaps = 77/1204 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPD+YIGS  K TQ +W+ +E  + M++R I++ PGLYKIFDE
Sbjct: 31   SVERIYQKKTQLEHILLRPDSYIGSTLKDTQQMWVLDESQQHMVNRDITFSPGLYKIFDE 90

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNK RDP M  +K+ I+   +++ + N G G+PV  H+ E  YVP LIFGHLLT
Sbjct: 91   ILVNAADNKVRDPTMSCIKIDINPAENMVRIWNDGKGIPVVHHKVENTYVPTLIFGHLLT 150

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD  +K TGGRNGYGAKL NIFS +FI+ET+  +  K ++QV+ +NM K S+P I 
Sbjct: 151  SSNYDDTERKVTGGRNGYGAKLCNIFSKKFIVETSSKEYKKSFRQVWVDNMTKTSDPKIL 210

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
              K G+++T ++F PDL++F M  LE D V+L  +R  D+A  C G  +KV LNG R+P+
Sbjct: 211  ADK-GEDFTCITFYPDLSRFGMNELEQDTVSLFTRRAYDMAATCNG--IKVFLNGKRLPI 267

Query: 265  KSFAEYVDMYPK-------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            K+F +YV+++ K       SV   +E VN+RW++ V +S   FQQVSFVN IAT KGGTH
Sbjct: 268  KNFVDYVNLFIKPNKDDADSVKVVYEAVNQRWQVAVAVSNTGFQQVSFVNSIATTKGGTH 327

Query: 318  VDYVANQVANHVMAVVNKKNKNANV--KAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            ++YV++Q+ N +M +V KK+  + V  K   +KNH+W+FVN LI+NP FDSQTKE +TL+
Sbjct: 328  INYVSDQIVNKLMDIVKKKSGKSGVQIKPFQIKNHMWLFVNCLIENPTFDSQTKENMTLQ 387

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGS C LSE+F+ + + KSGIVE +LSW  FK  + + K+   +K   ++GI KL+D
Sbjct: 388  IKSFGSTCTLSEKFIGQAS-KSGIVENVLSWIRFKAMEKMDKQCHKSKHSKLKGIPKLDD 446

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG +NS QCTLILTEGDSAK LA+AGL VVGRD +GVFPLRGKLLNVREAS+ Q++ 
Sbjct: 447  ANNAGTKNSSQCTLILTEGDSAKTLAVAGLGVVGRDNYGVFPLRGKLLNVREASNKQIME 506

Query: 495  NSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI  + KILGL+  ++Y   + +K LRYG +MIMTDQ                     
Sbjct: 507  NAEINALIKILGLQYKLKYESADTLKDLRYGKIMIMTDQ--------------------- 545

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGL+INF+H  WP+LLK  + + EFITPIVK   K  +  SFYS+P
Sbjct: 546  -------DQDGSHIKGLIINFVHCNWPNLLK-HNVVEEFITPIVKVF-KGKQEHSFYSLP 596

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            ++E W++S   N  +W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  +I+LA
Sbjct: 597  EFEEWQKSTP-NWHTWRVKYYKGLGTSTSKEAKEYFSDMNRHRIRFRYSGIEDDGSIQLA 655

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKELILFSMADLQ 719
            F K KI  RK WL  F            P  +L  K+ + I Y DFV+KEL+LFS  D +
Sbjct: 656  FDKSKIADRKNWLTNFTQERKRRRELGLPEPYLYGKDTRAITYHDFVHKELVLFSNLDNE 715

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDGLKPGQRK+LF   KRN I+E KVAQ +G V+E SAYHHGEQSL STI+G+A
Sbjct: 716  RSIPSVVDGLKPGQRKVLFTCLKRNLIREIKVAQLAGSVAELSAYHHGEQSLMSTIIGLA 775

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNN+NLLQP GQFGTR  GGKDAAS RYIFT L+ +TR +F  +DD LL+YL +D
Sbjct: 776  QNFVGSNNLNLLQPIGQFGTRLSGGKDAASPRYIFTALNSLTRLIFHLEDDPLLNYLYDD 835

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q+IEP WY PIIP VLVNG++GIGTG++++I NYN  +I+ N+ R+L+GE    M P +
Sbjct: 836  NQRIEPEWYAPIIPMVLVNGADGIGTGYATHILNYNVIEIINNLYRMLDGEEPHRMLPNF 895

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQND 958
            RGF GTIE   S      Y   G +  +++ TL I ELPIR WTQ+Y+E  LE +++ ++
Sbjct: 896  RGFTGTIEDLGSNR----YVCYGEVAVLDDDTLEITELPIRVWTQNYKESVLEPMLNGSE 951

Query: 959  ---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
               + I  +++Y  D TV F + +S E +   +  GL K FKL T +ST +M  FD  G 
Sbjct: 952  KVPACITDYKEYHTDVTVRFVIKMSPEKLREAESTGLHKFFKLQTVMSTGSMVCFDPLGC 1011

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLEN-LELELLKLENKVRFILGVVNGEIVVNN 1074
            +K Y     I+ EF+ +RL +YEKR KV LE  L  E  KLEN+ RF+L  +   +V+ N
Sbjct: 1012 LKCYPNEIIIIREFYELRLTWYEKR-KVYLEGVLSAEARKLENQARFVLEKIQSIMVIEN 1070

Query: 1075 RKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI-----DYD 1129
            + + +L+  L++  +   P  +       A A  E EE+  + E V+  +++     DY+
Sbjct: 1071 KPKKELIRMLKEANYDSDPVKAWKESIDKAAALQEQEEARTD-EAVSQTEAVEAGQPDYN 1129

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            Y+L+M + +LT E+   LLA RD   +E+  L+  +P  LW +DL  L+ +  +++   A
Sbjct: 1130 YILNMPLWSLTKERKDDLLAQRDAKQKELLILKSKSPSDLWREDLKKLEEEYKKVEAELA 1189

Query: 1190 RAEE 1193
              E+
Sbjct: 1190 ADEQ 1193


>gi|360044785|emb|CCD82333.1| putative dna topoisomerase II [Schistosoma mansoni]
          Length = 1544

 Score = 1107 bits (2863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 589/1204 (48%), Positives = 801/1204 (66%), Gaps = 77/1204 (6%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPD+YIGS  K TQ +W+ +E  + M++R I++ PGLYKIFDE
Sbjct: 31   SVERIYQKKTQLEHILLRPDSYIGSTLKDTQQMWVLDESQQHMVNRDITFSPGLYKIFDE 90

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNK RDP M  +K+ I+   +++ + N G G+PV  H+ E  YVP LIFGHLLT
Sbjct: 91   ILVNAADNKVRDPTMSCIKIDINPAENMVRIWNDGKGIPVVHHKVENTYVPTLIFGHLLT 150

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD  +K TGGRNGYGAKL NIFS +FI+ET+  +  K ++QV+ +NM K S+P I 
Sbjct: 151  SSNYDDTERKVTGGRNGYGAKLCNIFSKKFIVETSSKEYKKSFRQVWVDNMTKTSDPKIL 210

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
              K G+++T ++F PDL++F M  LE D V+L  +R  D+A  C G  +KV LNG R+P+
Sbjct: 211  ADK-GEDFTCITFYPDLSRFGMNELEQDTVSLFTRRAYDMAATCNG--IKVFLNGKRLPI 267

Query: 265  KSFAEYVDMYPK-------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            K+F +YV+++ K       SV   +E VN+RW++ V +S   FQQVSFVN IAT KGGTH
Sbjct: 268  KNFVDYVNLFIKPNKDDADSVKVVYEAVNQRWQVAVAVSNTGFQQVSFVNSIATTKGGTH 327

Query: 318  VDYVANQVANHVMAVVNKKNKNANV--KAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            ++YV++Q+ N +M +V KK+  + V  K   +KNH+W+FVN LI+NP FDSQTKE +TL+
Sbjct: 328  INYVSDQIVNKLMDIVKKKSGKSGVQIKPFQIKNHMWLFVNCLIENPTFDSQTKENMTLQ 387

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
              SFGS C LSE+F+ + + KSGIVE +LSW  FK  + + K+   +K   ++GI KL+D
Sbjct: 388  IKSFGSTCTLSEKFIGQAS-KSGIVENVLSWIRFKAMEKMDKQCHKSKHSKLKGIPKLDD 446

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG +NS QCTLILTEGDSAK LA+AGL VVGRD +GVFPLRGKLLNVREAS+ Q++ 
Sbjct: 447  ANNAGTKNSSQCTLILTEGDSAKTLAVAGLGVVGRDNYGVFPLRGKLLNVREASNKQIME 506

Query: 495  NSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N+EI  + KILGL+  ++Y   + +K LRYG +MIMTDQ                     
Sbjct: 507  NAEINALIKILGLQYKLKYESADTLKDLRYGKIMIMTDQ--------------------- 545

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGL+INF+H  WP+LLK  + + EFITPIVK   K  +  SFYS+P
Sbjct: 546  -------DQDGSHIKGLIINFVHCNWPNLLK-HNVVEEFITPIVKVF-KGKQEHSFYSLP 596

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            ++E W++S   N  +W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  +I+LA
Sbjct: 597  EFEEWQKSTP-NWHTWRVKYYKGLGTSTSKEAKEYFSDMNRHRIRFRYSGIEDDGSIQLA 655

Query: 672  FSKKKIEARKKWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKELILFSMADLQ 719
            F K KI  RK WL  F            P  +L  K+ + I Y DFV+KEL+LFS  D +
Sbjct: 656  FDKSKIADRKNWLTNFTQERKRRRELGLPEPYLYGKDTRAITYHDFVHKELVLFSNLDNE 715

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS+VDGLKPGQRK+LF   KRN I+E KVAQ +G V+E SAYHHGEQSL STI+G+A
Sbjct: 716  RSIPSVVDGLKPGQRKVLFTCLKRNLIREIKVAQLAGSVAELSAYHHGEQSLMSTIIGLA 775

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNN+NLLQP GQFGTR  GGKDAAS RYIFT L+ +TR +F  +DD LL+YL +D
Sbjct: 776  QNFVGSNNLNLLQPIGQFGTRLSGGKDAASPRYIFTALNSLTRLIFHLEDDPLLNYLYDD 835

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q+IEP WY PIIP VLVNG++GIGTG++++I NYN  +I+ N+ R+L+GE    M P +
Sbjct: 836  NQRIEPEWYAPIIPMVLVNGADGIGTGYATHILNYNVIEIINNLYRMLDGEEPHRMLPNF 895

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQND 958
            RGF GTIE   S      Y   G +  +++ TL I ELPIR WTQ+Y+E  LE +++ ++
Sbjct: 896  RGFTGTIEDLGSNR----YVCYGEVAVLDDDTLEITELPIRVWTQNYKESVLEPMLNGSE 951

Query: 959  ---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
               + I  +++Y  D TV F + +S E +   +  GL K FKL T +ST +M  FD  G 
Sbjct: 952  KVPACITDYKEYHTDVTVRFVIKMSPEKLREAESTGLHKFFKLQTVMSTGSMVCFDPLGC 1011

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLEN-LELELLKLENKVRFILGVVNGEIVVNN 1074
            +K Y     I+ EF+ +RL +YEKR KV LE  L  E  KLEN+ RF+L  +   +V+ N
Sbjct: 1012 LKCYPNEIIIIREFYELRLTWYEKR-KVYLEGVLSAEARKLENQARFVLEKIQSIMVIEN 1070

Query: 1075 RKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI-----DYD 1129
            + + +L+  L++  +   P  +       A A  E EE+  + E V+  +++     DY+
Sbjct: 1071 KPKKELIRMLKEANYDSDPVKAWKESIDKAAALQEQEEARTD-EAVSQTEAVEAGQPDYN 1129

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            Y+L+M + +LT E+   LLA RD   +E+  L+  +P  LW +DL  L+ +  +++   A
Sbjct: 1130 YILNMPLWSLTKERKDDLLAQRDAKQKELLILKSKSPSDLWREDLKKLEEEYKKVEAELA 1189

Query: 1190 RAEE 1193
              E+
Sbjct: 1190 ADEQ 1193


>gi|241955060|ref|XP_002420251.1| DNA topoisomerase 2, putative [Candida dubliniensis CD36]
 gi|223643592|emb|CAX42474.1| DNA topoisomerase 2, putative [Candida dubliniensis CD36]
          Length = 1461

 Score = 1107 bits (2863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 573/1234 (46%), Positives = 805/1234 (65%), Gaps = 102/1234 (8%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E YQK SQLEHIL RPDTYIGS+EK    +W ++ ++++M+ + ++ VPGLYKIFDEILV
Sbjct: 60   ETYQKLSQLEHILKRPDTYIGSVEKTKTEMWCFDADTESMVFKEVTIVPGLYKIFDEILV 119

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNK RDP M  ++V ID E+++I V N G G+PVE+H +E +Y+PELIFG+LLTSSN
Sbjct: 120  NAADNKIRDPSMKNIRVKIDAENNIIEVMNDGKGIPVEMHTKENMYIPELIFGNLLTSSN 179

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDDN KK TGGRNG+GAKL NIFST+F +ETAD    K YKQ +TNNM   S+P I+  K
Sbjct: 180  YDDNEKKVTGGRNGFGAKLCNIFSTQFEVETADLNMGKLYKQSWTNNMSNVSKPKITTLK 239

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
                +TK++F+PDL+KF+M  L++D+++++++RV DL G + K+  + LN  R+ + SF 
Sbjct: 240  TKKEYTKITFRPDLSKFDMDCLDNDLLSVLRRRVYDLCGTV-KNCNIYLNEKRLNISSFK 298

Query: 269  EYVDMYPKSV------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIA 310
             YV+MY K++                  T  HE  N+RWE+   +S+G F QVSFVN IA
Sbjct: 299  SYVEMYVKAIKERSPEPEPQDGTIKNFTTIVHEVFNDRWEVAFAVSDGSFNQVSFVNSIA 358

Query: 311  TIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VKAHNVKNHLWVFVNALIDNPAFDSQ 367
            T  GGTHV YV++Q+ N ++  ++KK K      +K   V++++++F+N LI+NPAF SQ
Sbjct: 359  TTSGGTHVKYVSDQIINKLVETLSKKEKGKKKLMIKPQEVRDNMFLFINCLIENPAFTSQ 418

Query: 368  TKETLTLRQSSFGSKCE-LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV 426
            TKE LT + S FG K + ++ + L     K+ IVE + + AN  + K L+K DG++   +
Sbjct: 419  TKEQLTTKVSQFGGKDKFVANDNLINRILKTSIVEKIRAIANANEDKALQKADGSRKSRI 478

Query: 427  RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
            +G   L DAN AG ++   CTLILTEG SA  LA+AGLSVVGRD +G FPLRGKLLNVRE
Sbjct: 479  KGQVNLVDANRAGTKDGHNCTLILTEGLSAMNLAVAGLSVVGRDYYGCFPLRGKLLNVRE 538

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            AS++Q+  NSEI ++K+I+GL+    Y   N+KSLRYGH+MIMTD               
Sbjct: 539  ASADQIAKNSEINSLKQIIGLQHKKVYTAENIKSLRYGHIMIMTD--------------- 583

Query: 545  IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK---- 600
                         QD DGSHIKGL+INF+ + +P LL IP FL+EFITPIVK T +    
Sbjct: 584  -------------QDQDGSHIKGLIINFLETSFPGLLDIPGFLLEFITPIVKVTVRARGA 630

Query: 601  -NGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
               +V+ FY+MP++E W+++  G    W+ KYYKGLGTST  E +EYF  +  H K F  
Sbjct: 631  GGKRVIPFYTMPEFEHWRDT-EGKQCRWTQKYYKGLGTSTPMEAREYFTALDRHLKRFHA 689

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
               +D   I+LAFSKKK + RK+WL  F PG HLD +   I  SDF+NKELILFSM+D  
Sbjct: 690  LQGEDKNYIDLAFSKKKADERKEWLQGFLPGTHLDPEITEIPISDFINKELILFSMSDNV 749

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS++DG KPGQRK+L+  FK+    E KVAQ +GYVSE++ YHHGEQSL  TI+G+A
Sbjct: 750  RSIPSVLDGFKPGQRKVLYGCFKKKLRSEIKVAQLAGYVSENTGYHHGEQSLVQTIIGLA 809

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+F+GSNNIN+L+PNG FG+R  GGKD ++ARYIFT LS ITR +F   DD L  Y+ +D
Sbjct: 810  QNFIGSNNINVLKPNGSFGSRAAGGKDFSAARYIFTELSEITRKIFNPLDDPLYTYVQDD 869

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q +EP WY+P++P +LVNG+EGIGTGWS+ IP+YNP+D+VAN+RRL+NGE ++ M PWY
Sbjct: 870  EQTVEPEWYLPVLPMILVNGAEGIGTGWSTNIPSYNPKDLVANIRRLMNGEELQEMTPWY 929

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQN 957
            +G+GG +E    ++    + V+G IE+++  T+ I E+P++ WT + +EFL S    ++ 
Sbjct: 930  KGWGGDLEPMGPQK----FKVSGRIEQIDSNTVEITEIPVKTWTNNVKEFLLSGFGNEKT 985

Query: 958  DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIK 1017
              +I+   ++   T++ F V L++  M ++ + GLL++FKL +++S +NM  FD  G IK
Sbjct: 986  QPWIKDMEEHH-TTSIRFVVKLTDAEMQKSLRIGLLERFKLVSSLSLANMVAFDPMGRIK 1044

Query: 1018 KYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
            KY+   +I+++F+++RLE+Y+KRK    +NL+ +LL L  + RFI  ++  ++ V N+K+
Sbjct: 1045 KYNDVLEIIKDFYYVRLEYYQKRKDYMTDNLQNQLLMLSEQARFIKMIIEKQLSVANKKK 1104

Query: 1078 TDLLLELRQKGFTPFPKNSKSIEA----------------------VVAGATD------- 1108
              L+  L +  FT F K+ K I++                         G T        
Sbjct: 1105 KQLVALLEEHNFTKFSKDGKPIKSNQELLTGEAADEEEEVEEQEGDEDVGDTSIANIQEG 1164

Query: 1109 ETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPES 1168
            ETE++   PE +       YDYLL MAI +LT E+   ++  RD+   E++ L   + + 
Sbjct: 1165 ETEQTAHVPETIYS----SYDYLLGMAIWSLTYERFMKIMQQRDQKEAELNALLSKSAKD 1220

Query: 1169 LWVKDLDALDMQLDELDKSDARAEEERMKIKGNG 1202
            LW  DLD     L E DK   R E+ER  +  NG
Sbjct: 1221 LWNHDLDEF---LVEFDKFLIRDEQERESLASNG 1251


>gi|19880936|gb|AAM00578.1|AF458979_3 TOP2 [Saccharomyces cerevisiae]
          Length = 1428

 Score = 1107 bits (2863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/1213 (48%), Positives = 795/1213 (65%), Gaps = 79/1213 (6%)

Query: 20   PTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGL 79
            PT P  +  + YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL
Sbjct: 2    PTEP-VSASDKYQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGL 60

Query: 80   YKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELI 139
            +KIFDEILVNAADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+I
Sbjct: 61   FKIFDEILVNAADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMI 120

Query: 140  FGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
            FGHLLTSSNYDD+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM   
Sbjct: 121  FGHLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSIC 180

Query: 200  SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
              P I+  K+G ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG
Sbjct: 181  HPPKITSYKKGPSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNG 239

Query: 260  HRVPVKSFAEYVDMYPKSV-------------------TRFHERVNERWEICVTLSEGQF 300
              + +++F  YV++Y KS+                   T  +ER+N RWE+   +S+  F
Sbjct: 240  KSLKIRNFKNYVELYLKSLEKKRQLDNGEDGTAKSDIPTILYERINNRWEVAFAVSDISF 299

Query: 301  QQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALID 360
            QQ+SFVN IAT  GGTHV+Y+ +Q+    ++ + KK K  +VK+  +KN++++F+N LI+
Sbjct: 300  QQISFVNSIATTMGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNMFIFINCLIE 358

Query: 361  NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG 420
            NPAF SQTKE LT R   FGS+CE+  E++ K+  K+ +   +   A+  +   LKK+DG
Sbjct: 359  NPAFTSQTKEQLTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALKKSDG 417

Query: 421  TKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGK 480
            T+   +    KLEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK
Sbjct: 418  TRKSRITNYPKLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGK 477

Query: 481  LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLL 540
            +LNVREAS++Q+L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD           
Sbjct: 478  MLNVREASADQILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD----------- 526

Query: 541  WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--T 598
                             QDHDGSHIKGL+INF+ S +P LL I  FL+EFITPI+K   T
Sbjct: 527  -----------------QDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSIT 569

Query: 599  NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFV 658
                  ++FY+MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F 
Sbjct: 570  KPTKNTIAFYNMPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFH 628

Query: 659  WEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADL 718
                 D + I+LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD 
Sbjct: 629  SLQGNDKDYIDLAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADN 688

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
             RSIP+++DG KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+
Sbjct: 689  IRSIPNVLDGFKPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGL 748

Query: 779  AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
            AQ+FVGSNNI LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L  Y+ E
Sbjct: 749  AQNFVGSNNIYLLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQE 808

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPW 898
            D + +EP WY+PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW
Sbjct: 809  DEKTVEPEWYLPILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPW 868

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND 958
            +RG+ GTIE+       + Y + G IE++ +  L I ELP R WT   +E+L   +  ND
Sbjct: 869  FRGWTGTIEEIEP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGND 924

Query: 959  S---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
                +I+   +  DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G 
Sbjct: 925  KIKPWIKDMEEQHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGK 983

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            IKKY++  +IL EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+
Sbjct: 984  IKKYNSVNEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNK 1043

Query: 1076 KRTDLLLELRQKGFTPFPK---------NSKSIEAV--VAGAT---DETEESEENPE-VV 1120
             R  ++ EL   GF  F K         N +  E +  V GAT   ++ E S E+PE V+
Sbjct: 1044 PRNAIIQELENLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDPENVI 1103

Query: 1121 NGVQSI--DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
            NG + +   Y+YLL M I +LT E+ Q LL  + +   E+++L K + + +W  DL A +
Sbjct: 1104 NGPEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFE 1163

Query: 1179 MQLDELDKSDARA 1191
            +   E  + DA A
Sbjct: 1164 VGYQEFLQRDAEA 1176


>gi|448121442|ref|XP_004204208.1| Piso0_000036 [Millerozyma farinosa CBS 7064]
 gi|358349747|emb|CCE73026.1| Piso0_000036 [Millerozyma farinosa CBS 7064]
          Length = 1406

 Score = 1107 bits (2862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/1246 (45%), Positives = 811/1246 (65%), Gaps = 89/1246 (7%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            + Y++ SQLEHIL RPDTYIGS+E+    +W ++ ES++M+  T+S VPGLYKIFDEILV
Sbjct: 54   DQYKRLSQLEHILKRPDTYIGSVERSPMEIWSFDTESESMVFGTVSIVPGLYKIFDEILV 113

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNK RDP M  +KV ID E+++ISV N G G+PVEIH++E +Y+PELIFG+LLTSSN
Sbjct: 114  NAADNKIRDPNMKNIKVKIDAENNMISVMNDGKGIPVEIHKKEKIYIPELIFGNLLTSSN 173

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD+ +K TGGRNGYGAKL NIFST+F++ETAD      Y+Q + +NM + S+P ++K K
Sbjct: 174  YDDDERKVTGGRNGYGAKLCNIFSTDFVLETADKNTGLVYRQQWNDNMSRMSKPKVTKMK 233

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
                +TKVSFKPDL KF M  L+ D +A++ +RV DL G + K+  + LN  ++ +K F 
Sbjct: 234  TKTEYTKVSFKPDLGKFGMDSLDKDTLAVLTRRVYDLCGTV-KNCNIYLNDKKIDIKGFK 292

Query: 269  EYVDMYPKSV--------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKG 314
             YV +Y K++              T  +E +N+RWE+   +S+G F QVSFVN IAT  G
Sbjct: 293  NYVQLYVKAIKDRSPAQFADNNKPTLVYEVINDRWEVAFAVSDGVFNQVSFVNSIATTSG 352

Query: 315  GTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            G+HV Y+ +Q+ N +   + + +K + +K +++KN++++FVN LI+NPAF SQTKE LT 
Sbjct: 353  GSHVKYITDQIVNKLTENLTRGDKKSKIKPNDIKNNMFLFVNCLIENPAFTSQTKEHLTT 412

Query: 375  RQSSFGSKCE----LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGIS 430
            + S FG K +    +S  F+ K+   S IV+ + +  + ++  +L+K DG++   ++   
Sbjct: 413  KVSQFGGKKDDKVLVSSGFISKIMNTS-IVDIIKAARSAREDIELQKADGSRKSRIKNQV 471

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KL DAN AG +   +CTLILTEGDSA +LA+AGL+VVGR+ +G FPLRGKLLNVREAS++
Sbjct: 472  KLVDANKAGTKEGHKCTLILTEGDSALSLAVAGLAVVGRNYYGCFPLRGKLLNVREASAD 531

Query: 491  QVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAW 548
            Q+  N+EI  +K+I+GLK  V Y+  N+K LRYGH+MIMTD                   
Sbjct: 532  QIGKNAEINALKQIIGLKHKVHYSLENIKDLRYGHIMIMTD------------------- 572

Query: 549  ITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFY 608
                     QDHDGSHIKGL+INF+ + +P LL+IP FL+EFITPIVK   KN KVLSFY
Sbjct: 573  ---------QDHDGSHIKGLIINFLDTSFPGLLQIPGFLLEFITPIVKVFLKNKKVLSFY 623

Query: 609  SMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAI 668
            +MP++E W+E+  G    W  KYYKGLGTST  EG+EYF  +  H K F      D  +I
Sbjct: 624  TMPEFEQWRET-EGKTQRWRHKYYKGLGTSTLMEGREYFAALDRHLKKFHALQGDDKSSI 682

Query: 669  ELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
            +LAFSKKK + RK+WL  FEPG HLD   + I  SDF+NKELILFSMAD  RSIPS++DG
Sbjct: 683  DLAFSKKKADDRKEWLQCFEPGTHLDPLLQEIPISDFINKELILFSMADNIRSIPSVLDG 742

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
             KPGQRK+L+  F+RN   + KV+Q +GYVSE++ YHHGE SL  TI+G+AQDF+GSNN+
Sbjct: 743  FKPGQRKVLYGCFRRNLTVDIKVSQLAGYVSENTGYHHGEASLVQTIIGLAQDFIGSNNL 802

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            N+L+P G FG+R  GGKD ++ARYIFT+LS IT+ +F   D+ L  Y+ ED   +EP WY
Sbjct: 803  NVLKPIGTFGSRAAGGKDFSAARYIFTQLSEITKKVFNPLDNPLYTYVQEDEGTVEPEWY 862

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            +P++P VLVNG+EGIGTGWS+ IP +NP DIV N+RRL+ GE M PM PW++G+ G  + 
Sbjct: 863  LPVLPMVLVNGAEGIGTGWSTNIPPFNPADIVQNIRRLMAGEEMIPMTPWFKGWEGETQP 922

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID--QNDSFIRGFRQ 966
             +  +    + V G IE+++  TL I E+P + W  + +EFL S +D  ++  +I+   +
Sbjct: 923  ISQDK----FKVMGTIEQIDNNTLEISEIPPKTWINNMKEFLLSGLDSKKDKPWIKDVEE 978

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
            +     + F + LSEE M ++ + GLL++FKL + I+ SNM LFD  G IKKY++P QI+
Sbjct: 979  HH-GMNIKFIIKLSEEEMAKSHKIGLLERFKLISVINLSNMVLFDPSGRIKKYESPLQIV 1037

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
             EFF++RLE+Y++RK    + L+ +LLKL  + RFI  +++ +I ++N+KR+ L+ +L++
Sbjct: 1038 REFFYVRLEYYQRRKDFLTDKLQNQLLKLSEQARFIKHIIDNKISLSNKKRSVLVQQLQK 1097

Query: 1087 KGFTPFPKNSKSIEAV------------------------VAGATDETEESEENPEVVNG 1122
              F  F K+ K ++ V                           A+      E  P+ V  
Sbjct: 1098 LDFAMFDKDGKKVQEVGEESLFVDPEELMEEEEQQAEDITQVKASTSDNNGEHKPDTVYA 1157

Query: 1123 VQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
                 YDYLL M + +LT E+ + LL+ +D   +E++ L + + + LW +DL+   +  +
Sbjct: 1158 Y----YDYLLGMTMWSLTKERYEKLLSQKDDKEKELNILLRKSAKDLWNEDLEDFMVSWE 1213

Query: 1183 ELDKSDARAEEERMKIKGNGNGDAGPKIV---AKRAPKNARKNDKK 1225
            +  + D       + +KG        +      +  PK  + N+KK
Sbjct: 1214 KFLQEDLENRSTLIPMKGTKKSAKRTRTTKQSKQEPPKKKQTNEKK 1259


>gi|297272911|ref|XP_002808175.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-alpha-like
            [Macaca mulatta]
          Length = 1481

 Score = 1107 bits (2862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 599/1204 (49%), Positives = 801/1204 (66%), Gaps = 100/1204 (8%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 17   SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 75

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 76   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 135

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK           +T IF   + +              + +NMG+  E  + 
Sbjct: 136  SSNYDDDEKK-----------VTXIFHLSYSL----------LPXTWMDNMGRAGEMEL- 173

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 174  KPFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGS-TKDVKVFLNGNKLPVK 232

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 233  GFRSYVDMYLKDKLDETGNPLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 292

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 293  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 352

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 353  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 411

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS  CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 412  NDAGGRNSTDCTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKMLNVREASHKQIMEN 471

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 472  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 509

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 510  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 561

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 562  FEEWKSS-TPNYKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 620

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 621  SKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 680

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 681  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 740

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D 
Sbjct: 741  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDN 800

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRL++GE   PM P Y+
Sbjct: 801  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLMDGEEPLPMLPSYK 860

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 861  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 916

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 917  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 976

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 977  KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1036

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  +      +D  +E+E++  V +   +  ++Y
Sbjct: 1037 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTDSGPT--FNY 1094

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R++  +E+D L++ +P  LW +DL      ++EL+  +A+
Sbjct: 1095 LLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATF---IEELEAVEAK 1151

Query: 1191 AEEE 1194
             +++
Sbjct: 1152 EKQD 1155


>gi|259149274|emb|CAY82516.1| Top2p [Saccharomyces cerevisiae EC1118]
          Length = 1428

 Score = 1106 bits (2861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 583/1215 (47%), Positives = 792/1215 (65%), Gaps = 79/1215 (6%)

Query: 20   PTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGL 79
            PT P  +  + YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL
Sbjct: 2    PTEP-VSASDKYQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGL 60

Query: 80   YKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELI 139
            +KIFDEILVNAADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+I
Sbjct: 61   FKIFDEILVNAADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMI 120

Query: 140  FGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
            FGHLLTSSNYDD+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM   
Sbjct: 121  FGHLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSIC 180

Query: 200  SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
              P I+  K+G ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG
Sbjct: 181  HPPKITSYKKGPSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNG 239

Query: 260  HRVPVKSFAEYVDMYPKSV-------------------TRFHERVNERWEICVTLSEGQF 300
              + +++F  YV++Y KS+                   T  +ER+N RWE+   +S+  F
Sbjct: 240  KSLKIRNFKNYVELYLKSLEKKRQLDNGEDGAAKSDIPTILYERINNRWEVAFAVSDISF 299

Query: 301  QQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALID 360
            QQ+SFVN IAT  GGTHV+Y+ +Q+    ++ + KK K  +VK+  +KN++++F+N LI+
Sbjct: 300  QQISFVNSIATTMGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNMFIFINCLIE 358

Query: 361  NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG 420
            NPAF SQTKE LT R   FGS+CE+  E++ K+  K+ +   +   A+  +   LKK+DG
Sbjct: 359  NPAFTSQTKEQLTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALKKSDG 417

Query: 421  TKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGK 480
            T+   +    KLEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK
Sbjct: 418  TRKSRITNYPKLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGK 477

Query: 481  LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLL 540
            +LNVREAS++Q+L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD           
Sbjct: 478  MLNVREASADQILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD----------- 526

Query: 541  WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--T 598
                             QDHDGSHIKGL+INF+ S +P LL I  FL+EFITPI+K   T
Sbjct: 527  -----------------QDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSIT 569

Query: 599  NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFV 658
                  ++FY+MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F 
Sbjct: 570  KPTKNTIAFYNMPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFH 628

Query: 659  WEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADL 718
                 D + I+LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD 
Sbjct: 629  SLQGNDKDYIDLAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADN 688

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
             RSIP+++DG KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+
Sbjct: 689  IRSIPNVLDGFKPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGL 748

Query: 779  AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
            AQ+FVGSNNI LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L  Y+ E
Sbjct: 749  AQNFVGSNNIYLLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQE 808

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPW 898
            D + +EP WY+PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW
Sbjct: 809  DEKTVEPEWYLPILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPW 868

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND 958
            +RG+ GTIE+       + Y + G IE++ +  L I ELP R WT   +E+L   +  ND
Sbjct: 869  FRGWTGTIEEIEP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGND 924

Query: 959  S---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
                +I+   +  DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G 
Sbjct: 925  KIKPWIKDMEEQHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGK 983

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            IKKY++  +IL EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+
Sbjct: 984  IKKYNSVNEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNK 1043

Query: 1076 KRTDLLLELRQKGFTPFPK---------NSKSIEAV--VAGAT----DETEESEENPEVV 1120
             R  ++ EL   GF  F K         N +  E +  V GAT    DE    E+   V+
Sbjct: 1044 PRNAIIQELENLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVI 1103

Query: 1121 NGVQSI--DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
            NG + +   Y+YLL M I +LT E+ Q LL  + +   E+++L K + + +W  DL A +
Sbjct: 1104 NGPEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFE 1163

Query: 1179 MQLDELDKSDARAEE 1193
            +   E  + DA A +
Sbjct: 1164 VGYQEFLQRDAEARD 1178


>gi|332847785|ref|XP_003315524.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-alpha [Pan
            troglodytes]
          Length = 1500

 Score = 1106 bits (2860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 592/1204 (49%), Positives = 791/1204 (65%), Gaps = 110/1204 (9%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G PV  H+ E +YV   IFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISISNNGKGXPVVQHKIEKMYVLVFIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            S  YDD+ K  TG                               + + +NMG   E  + 
Sbjct: 148  SCKYDDDEKNLTG-------------------------------RTWMDNMGTLGEMEL- 175

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G++   ++F+PDL+KF M  L+ D+VAL+ +R  D+AG   K VKV LNG+++PVK
Sbjct: 176  KPFNGEDSLCITFQPDLSKFKMQSLDKDIVALLVRRAYDIAGST-KDVKVFLNGNKLPVK 234

Query: 266  SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 235  GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 294

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 295  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 354

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             SFGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 355  KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 413

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 414  NDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 473

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 474  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 511

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 512  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 563

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 564  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 622

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 623  SKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 682

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ
Sbjct: 683  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 742

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L +D 
Sbjct: 743  NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDN 802

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R+IV N+RRL++GE   PM P Y+
Sbjct: 803  QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMLPSYK 862

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 863  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 918

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 919  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 978

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 979  KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1038

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  +      +D  +E+E++  V +   +  ++Y
Sbjct: 1039 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTDSGPT--FNY 1096

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R++  +E+D L++ +P  LW +DL      ++EL+  +A+
Sbjct: 1097 LLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATF---IEELEAVEAK 1153

Query: 1191 AEEE 1194
             +++
Sbjct: 1154 EKQD 1157


>gi|19880943|gb|AAM00584.1|AF458980_3 TOP2 [Saccharomyces cerevisiae]
          Length = 1428

 Score = 1106 bits (2860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 582/1202 (48%), Positives = 790/1202 (65%), Gaps = 78/1202 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL+KIFDEILVNA
Sbjct: 12   YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 71

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNYD
Sbjct: 72   ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 131

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM     P I+  K+G
Sbjct: 132  DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKKG 191

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG  + +++F  Y
Sbjct: 192  PSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 250

Query: 271  VDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
            V++Y KS+                   T  +ER+N RWE+   +S+  FQQ+SFVN IAT
Sbjct: 251  VELYLKSLEKKRQLDNGEDGTAKSDIPTILYERINNRWEVAFAVSDISFQQISFVNSIAT 310

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
              GGTHV+Y+ +Q+    ++ + KK K  +VK+  +KN++++F+N LI+NPAF SQTKE 
Sbjct: 311  TMGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQ 369

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
            LT R   FGS+CE+  E++ K+  K+ +   +   A+  +   LKK+DGT+   +    K
Sbjct: 370  LTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALKKSDGTRKSRITNYPK 428

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            LEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++Q
Sbjct: 429  LEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQ 488

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            +L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                      
Sbjct: 489  ILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD---------------------- 526

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFYS 609
                  QDHDGSHIKGL+INF+ S +P LL I  FL+EFITPI+K   T      ++FY+
Sbjct: 527  ------QDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYN 580

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F      D + I+
Sbjct: 581  MPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYID 639

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG 
Sbjct: 640  LAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGF 699

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI 
Sbjct: 700  KPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIY 759

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L  Y+ ED + +EP WY+
Sbjct: 760  LLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYL 819

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+ 
Sbjct: 820  PILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEI 879

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQ 966
                  + Y + G IE++ +  L I ELP R WT   +E+L   +  ND    +I+   +
Sbjct: 880  EP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEE 935

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
              DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +IL
Sbjct: 936  QHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEIL 994

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
             EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL  
Sbjct: 995  SEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELEN 1054

Query: 1087 KGFTPFPK---------NSKSIEAV--VAGAT---DETEESEENPE-VVNGVQSI--DYD 1129
             GF  F K         N +  E +  V GAT   ++ E S E+PE V+NG + +   Y+
Sbjct: 1055 LGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDPENVINGPEELYGTYE 1114

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            YLL M I +LT E+ Q LL  + +   E+++L K + + +W  DL A ++   E  + DA
Sbjct: 1115 YLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDA 1174

Query: 1190 RA 1191
             A
Sbjct: 1175 EA 1176


>gi|452844784|gb|EME46718.1| hypothetical protein DOTSEDRAFT_87208 [Dothistroma septosporum NZE10]
          Length = 1714

 Score = 1105 bits (2859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/1201 (47%), Positives = 796/1201 (66%), Gaps = 73/1201 (6%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            + YQK +QLEHIL RPDTYIGS+E+ T+ LWIY  E+++M +R ++YVPGLYKIFDEILV
Sbjct: 139  DQYQKLTQLEHILKRPDTYIGSVEQTTEQLWIYNSETESMENRKVTYVPGLYKIFDEILV 198

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNKQRD  MD ++V I  E  +ISV N+G G+P+E+H++EG+Y+PE+IFGHLLTSSN
Sbjct: 199  NAADNKQRDKNMDELRVWIHPEKGVISVKNNGKGIPIEMHEKEGIYIPEMIFGHLLTSSN 258

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD   KTTGGRNGYGAKLTNI+STEF ++T D K  ++Y+Q + NNM    +  I K K
Sbjct: 259  YDDEEAKTTGGRNGYGAKLTNIYSTEFQLDTVDRKTKQRYRQTWRNNMSTMEKAKIEKVK 318

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
            +  ++T+++FKPD  KF M  ++ D   L+K+RV D+AG   K VKV LNG R+ +  F 
Sbjct: 319  DTQDYTQITFKPDFRKFKMDGMDADFEGLVKRRVYDMAGT-AKGVKVYLNGERIKIAKFK 377

Query: 269  EYVDMYPKSVTR--------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKG 314
            +Y++MY K++                  +  +ERWEI   +S+G FQQVSFVN IAT  G
Sbjct: 378  QYMEMYTKAIKNENLANDGTAPEQVILTDSPHERWEIGFAVSDGSFQQVSFVNSIATTSG 437

Query: 315  GTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            GTHV+Y+A Q+ + + A VNKKNK    +K   +KNH+++FVN LI NPAF SQTKE LT
Sbjct: 438  GTHVNYIAEQICDKLEAHVNKKNKGGVKLKKAQIKNHIFLFVNCLIVNPAFTSQTKEQLT 497

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLE 433
             + S+FGSK  +SE+FLK +  K+  V  ++ +A  K  K L K+DG + + +   SKL 
Sbjct: 498  TKVSAFGSKPTVSEKFLKDIL-KTEAVTNIIHFAQQKADKVLAKSDGNRRQRMNN-SKLT 555

Query: 434  DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            DAN AG ++  +CTLILTEGDSA  LA+AG +VV  D FGVFPLRGK+LNVR+AS +Q+ 
Sbjct: 556  DANKAGTKDGHKCTLILTEGDSAALLALAGRAVVNPDLFGVFPLRGKILNVRDASIDQIS 615

Query: 494  NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
             N+EI NIKK LGL+   +Y + K LRYGHLMIMTDQ                       
Sbjct: 616  KNAEIQNIKKFLGLQHKKDYTDTKGLRYGHLMIMTDQ----------------------- 652

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATN---KNGKV-LSFYS 609
                 DHDGSHIKGLLINF+   +PSLL+IP FL+EFITPIVK      KN K    F++
Sbjct: 653  -----DHDGSHIKGLLINFLQVQYPSLLRIPGFLMEFITPIVKVWKGDVKNPKQKRDFFT 707

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MP+YEAW+E L GN+  W  KYYKGLGTS +++ + YF ++  H K F    D + E I+
Sbjct: 708  MPEYEAWRE-LPGNSKGWDHKYYKGLGTSDTRDAQVYFADLDTHLKQFHAMQDGEPELID 766

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKY-IKYSDFVNKELILFSMADLQRSIPSMVDG 728
            LAFSKKK + RK WL  F PG +LD      I Y+DF+NKELILFSMAD  RSIPS++DG
Sbjct: 767  LAFSKKKADERKTWLGNFVPGTYLDTSASAEITYNDFINKELILFSMADNMRSIPSVIDG 826

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKPGQRK+++  F+RN  K+ KV + +G VS  +AY +GE SL  TI+G+AQ+FVGSNN+
Sbjct: 827  LKPGQRKVMYTCFRRNLKKDVKVVELAGSVSGLTAYPYGETSLQQTIIGLAQNFVGSNNM 886

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            N+L+P+G FG+R QGG DAAS RYI+TRLSP+ R +F + D+ LL Y  +DG+ IEP  Y
Sbjct: 887  NILEPSGNFGSRLQGGNDAASPRYIYTRLSPLARAIFHQSDEALLTYNTDDGKTIEPEMY 946

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG--EMMEPMHPWYRGFGGTI 906
            +PI+P +L+NG++GIGTGWS+ +PNY P D++AN+ R ++G  + M PM PW+RG+ G  
Sbjct: 947  VPILPMILINGADGIGTGWSTTVPNYRPEDVIANLIRRMDGNKDSMIPMQPWFRGWTGET 1006

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGF 964
            E+   +     +     I +  E  +++ ELP+R WTQD++E LE I+  ++  SFI+ +
Sbjct: 1007 EQLGDER----FKFGAAIRKTGEGEVQVTELPVRYWTQDFKEKLEDILKAEKVPSFIKDY 1062

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
             +Y+   TV+F +   EE  +   ++ L   FKL+ T +T+N+  FD +G I KY TP  
Sbjct: 1063 TEYNTPETVNF-IIKMEEKKLAEHEDKLEDLFKLSKTQATTNLVAFDPQGRIHKYATPLD 1121

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            I+EEF+++RL+ Y++RK   L  +E EL K  N+ RFI  ++ GE+VV+ +K+  L+ EL
Sbjct: 1122 IMEEFYNVRLQKYDQRKMYLLSEMERELRKFTNQARFISMIIKGELVVSKKKKAVLVAEL 1181

Query: 1085 RQKGFTPFP-----KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            ++  F  FP     K     EAV+    DE+++++          + DYDYLL MAI +L
Sbjct: 1182 QKLNFDRFPKVIDAKKQGEFEAVIEEDNDESDDAD------TAAGASDYDYLLGMAIWSL 1235

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIK 1199
            T E+V+ L         E+ +L   + + LW  DL AL+   + + + + +  E+++K K
Sbjct: 1236 TQERVEKLNRQIGDKENEITELTAKSSKDLWRTDLAALEEAWNAMLEEELK-REKKVKAK 1294

Query: 1200 G 1200
            G
Sbjct: 1295 G 1295


>gi|19880950|gb|AAM00590.1|AF458981_3 TOP2 [Saccharomyces cerevisiae]
          Length = 1428

 Score = 1105 bits (2858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1202 (48%), Positives = 786/1202 (65%), Gaps = 78/1202 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL+KIFDEILVNA
Sbjct: 12   YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 71

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNYD
Sbjct: 72   ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 131

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM     P I+  K+G
Sbjct: 132  DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKKG 191

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG  + +++F  Y
Sbjct: 192  PSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 250

Query: 271  VDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
            V++Y KS+                   T  +ER+N RWE+   +S+  FQQ+SFVN IAT
Sbjct: 251  VELYLKSLEKKRQLDNGEDGAAKSDIPTILYERINNRWEVAFAVSDISFQQISFVNSIAT 310

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
              GGTHV+Y+ +Q+    ++ + KK K  +VK+  +KN++++F+N LI+NPAF SQTKE 
Sbjct: 311  TMGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQ 369

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
            LT R   FGS+CE+  E++ K+  K+ +   +   A+  +   LKK+DGT+   +    K
Sbjct: 370  LTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALKKSDGTRKSRITNYPK 428

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            LEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++Q
Sbjct: 429  LEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQ 488

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            +L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                      
Sbjct: 489  ILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD---------------------- 526

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFYS 609
                  QDHDGSHIKGL+INF+ S +P LL I  FL+EFITPI+K   T      ++FY+
Sbjct: 527  ------QDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYN 580

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F      D + I+
Sbjct: 581  MPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYID 639

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG 
Sbjct: 640  LAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGF 699

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI 
Sbjct: 700  KPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIY 759

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L  Y+ ED + +EP WY+
Sbjct: 760  LLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYL 819

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+ 
Sbjct: 820  PILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEI 879

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQ 966
                  + Y + G IE++ +  L I ELP R WT   +E+L   +  ND    +I+   +
Sbjct: 880  EP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEE 935

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
              DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +IL
Sbjct: 936  QHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEIL 994

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
             EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL  
Sbjct: 995  SEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELEN 1054

Query: 1087 KGFTPFPK---------NSKSIEAV--VAGAT----DETEESEENPEVVNGVQSI--DYD 1129
             GF  F K         N +  E +  V GAT    DE    E+   V+NG + +   Y+
Sbjct: 1055 LGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYE 1114

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            YLL M I +LT E+ Q LL  + +   E+++L K + + +W  DL A ++   E  + DA
Sbjct: 1115 YLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDA 1174

Query: 1190 RA 1191
             A
Sbjct: 1175 EA 1176


>gi|190409077|gb|EDV12342.1| DNA topoisomerase 2 [Saccharomyces cerevisiae RM11-1a]
          Length = 1428

 Score = 1105 bits (2857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1202 (48%), Positives = 786/1202 (65%), Gaps = 78/1202 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL+KIFDEILVNA
Sbjct: 12   YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 71

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNYD
Sbjct: 72   ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 131

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM     P I+  K+G
Sbjct: 132  DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKKG 191

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG  + +++F  Y
Sbjct: 192  PSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 250

Query: 271  VDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
            V++Y KS+                   T  +ER+N RWE+   +S+  FQQ+SFVN IAT
Sbjct: 251  VELYLKSLEKKRQLDNGEDGTAKSDIPTILYERINNRWEVAFAVSDISFQQISFVNSIAT 310

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
              GGTHV+Y+ +Q+    ++ + KK K  +VK+  +KN++++F+N LI+NPAF SQTKE 
Sbjct: 311  TMGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQ 369

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
            LT R   FGS+CE+  E++ K+  K+ +   +   A+  +   LKK+DGT+   +    K
Sbjct: 370  LTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALKKSDGTRKSRITNYPK 428

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            LEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++Q
Sbjct: 429  LEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQ 488

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            +L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                      
Sbjct: 489  ILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD---------------------- 526

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFYS 609
                  QDHDGSHIKGL+INF+ S +P LL I  FL+EFITPI+K   T      ++FY+
Sbjct: 527  ------QDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYN 580

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F      D + I+
Sbjct: 581  MPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYID 639

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG 
Sbjct: 640  LAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGF 699

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI 
Sbjct: 700  KPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIY 759

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L  Y+ ED + +EP WY+
Sbjct: 760  LLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYL 819

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+ 
Sbjct: 820  PILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEI 879

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQ 966
                  + Y + G IE++ +  L I ELP R WT   +E+L   +  ND    +I+   +
Sbjct: 880  EP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEE 935

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
              DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +IL
Sbjct: 936  QHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEIL 994

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
             EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL  
Sbjct: 995  SEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELEN 1054

Query: 1087 KGFTPFPK---------NSKSIEAV--VAGAT----DETEESEENPEVVNGVQSI--DYD 1129
             GF  F K         N +  E +  V GAT    DE    E+   V+NG + +   Y+
Sbjct: 1055 LGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYE 1114

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            YLL M I +LT E+ Q LL  + +   E+++L K + + +W  DL A ++   E  + DA
Sbjct: 1115 YLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDA 1174

Query: 1190 RA 1191
             A
Sbjct: 1175 EA 1176


>gi|19880908|gb|AAM00554.1|AF458975_3 TOP2 [Saccharomyces cerevisiae]
 gi|19880915|gb|AAM00560.1|AF458976_3 TOP2 [Saccharomyces cerevisiae]
 gi|19880922|gb|AAM00566.1|AF458977_3 TOP2 [Saccharomyces cerevisiae]
 gi|71064112|gb|AAZ22520.1| Top2p [Saccharomyces cerevisiae]
 gi|151944446|gb|EDN62724.1| topoisomerase II [Saccharomyces cerevisiae YJM789]
 gi|392296902|gb|EIW08003.1| Top2p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 1428

 Score = 1105 bits (2857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1202 (48%), Positives = 786/1202 (65%), Gaps = 78/1202 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL+KIFDEILVNA
Sbjct: 12   YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 71

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNYD
Sbjct: 72   ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 131

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM     P I+  K+G
Sbjct: 132  DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKKG 191

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG  + +++F  Y
Sbjct: 192  PSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 250

Query: 271  VDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
            V++Y KS+                   T  +ER+N RWE+   +S+  FQQ+SFVN IAT
Sbjct: 251  VELYLKSLEKKRQLDNGEDGTAKSDIPTILYERINNRWEVAFAVSDISFQQISFVNSIAT 310

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
              GGTHV+Y+ +Q+    ++ + KK K  +VK+  +KN++++F+N LI+NPAF SQTKE 
Sbjct: 311  TMGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQ 369

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
            LT R   FGS+CE+  E++ K+  K+ +   +   A+  +   LKK+DGT+   +    K
Sbjct: 370  LTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALKKSDGTRKSRITNYPK 428

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            LEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++Q
Sbjct: 429  LEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQ 488

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            +L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                      
Sbjct: 489  ILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD---------------------- 526

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFYS 609
                  QDHDGSHIKGL+INF+ S +P LL I  FL+EFITPI+K   T      ++FY+
Sbjct: 527  ------QDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYN 580

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F      D + I+
Sbjct: 581  MPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYID 639

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG 
Sbjct: 640  LAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGF 699

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI 
Sbjct: 700  KPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIY 759

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L  Y+ ED + +EP WY+
Sbjct: 760  LLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYL 819

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+ 
Sbjct: 820  PILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEI 879

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQ 966
                  + Y + G IE++ +  L I ELP R WT   +E+L   +  ND    +I+   +
Sbjct: 880  EP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEE 935

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
              DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +IL
Sbjct: 936  QHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEIL 994

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
             EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL  
Sbjct: 995  SEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELEN 1054

Query: 1087 KGFTPFPK---------NSKSIEAV--VAGAT----DETEESEENPEVVNGVQSI--DYD 1129
             GF  F K         N +  E +  V GAT    DE    E+   V+NG + +   Y+
Sbjct: 1055 LGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYE 1114

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            YLL M I +LT E+ Q LL  + +   E+++L K + + +W  DL A ++   E  + DA
Sbjct: 1115 YLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDA 1174

Query: 1190 RA 1191
             A
Sbjct: 1175 EA 1176


>gi|19880929|gb|AAM00572.1|AF458978_3 TOP2 [Saccharomyces cerevisiae]
          Length = 1428

 Score = 1105 bits (2857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1202 (48%), Positives = 786/1202 (65%), Gaps = 78/1202 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL+KIFDEILVNA
Sbjct: 12   YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 71

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNYD
Sbjct: 72   ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 131

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM     P I+  K+G
Sbjct: 132  DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKKG 191

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG  + +++F  Y
Sbjct: 192  PSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 250

Query: 271  VDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
            V++Y KS+                   T  +ER+N RWE+   +S+  FQQ+SFVN IAT
Sbjct: 251  VELYLKSLEKKRQLDNGEDGAAKSDIPTILYERINNRWEVAFAVSDISFQQISFVNSIAT 310

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
              GGTHV+Y+ +Q+    ++ + KK K  +VK+  +KN++++F+N LI+NPAF SQTKE 
Sbjct: 311  TMGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQ 369

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
            LT R   FGS+CE+  E++ K+  K+ +   +   A+  +   LKK+DGT+   +    K
Sbjct: 370  LTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALKKSDGTRKSRITNYPK 428

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            LEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++Q
Sbjct: 429  LEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQ 488

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            +L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                      
Sbjct: 489  ILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD---------------------- 526

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFYS 609
                  QDHDGSHIKGL+INF+ S +P LL I  FL+EFITPI+K   T      ++FY+
Sbjct: 527  ------QDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYN 580

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F      D + I+
Sbjct: 581  MPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYID 639

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG 
Sbjct: 640  LAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGF 699

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI 
Sbjct: 700  KPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIY 759

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L  Y+ ED + +EP WY+
Sbjct: 760  LLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYL 819

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+ 
Sbjct: 820  PILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEI 879

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQ 966
                  + Y + G IE++ +  L I ELP R WT   +E+L   +  ND    +I+   +
Sbjct: 880  EP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEE 935

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
              DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +IL
Sbjct: 936  QHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEIL 994

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
             EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL  
Sbjct: 995  SEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELEN 1054

Query: 1087 KGFTPFPK---------NSKSIEAV--VAGAT----DETEESEENPEVVNGVQSI--DYD 1129
             GF  F K         N +  E +  V GAT    DE    E+   V+NG + +   Y+
Sbjct: 1055 LGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYE 1114

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            YLL M I +LT E+ Q LL  + +   E+++L K + + +W  DL A ++   E  + DA
Sbjct: 1115 YLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDA 1174

Query: 1190 RA 1191
             A
Sbjct: 1175 EA 1176


>gi|398364937|ref|NP_014311.3| DNA topoisomerase 2 [Saccharomyces cerevisiae S288c]
 gi|1351262|sp|P06786.2|TOP2_YEAST RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|19880866|gb|AAM00518.1|AF458969_3 TOP2 [Saccharomyces cerevisiae]
 gi|19880880|gb|AAM00530.1|AF458971_3 TOP2 [Saccharomyces cerevisiae]
 gi|19880887|gb|AAM00536.1|AF458972_3 TOP2 [Saccharomyces cerevisiae]
 gi|887623|emb|CAA61422.1| ORF N2244 [Saccharomyces cerevisiae]
 gi|1301989|emb|CAA95964.1| TOP2 [Saccharomyces cerevisiae]
 gi|285814563|tpg|DAA10457.1| TPA: DNA topoisomerase 2 [Saccharomyces cerevisiae S288c]
          Length = 1428

 Score = 1105 bits (2857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1202 (48%), Positives = 786/1202 (65%), Gaps = 78/1202 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL+KIFDEILVNA
Sbjct: 12   YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 71

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNYD
Sbjct: 72   ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 131

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM     P I+  K+G
Sbjct: 132  DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKKG 191

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG  + +++F  Y
Sbjct: 192  PSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 250

Query: 271  VDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
            V++Y KS+                   T  +ER+N RWE+   +S+  FQQ+SFVN IAT
Sbjct: 251  VELYLKSLEKKRQLDNGEDGAAKSDIPTILYERINNRWEVAFAVSDISFQQISFVNSIAT 310

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
              GGTHV+Y+ +Q+    ++ + KK K  +VK+  +KN++++F+N LI+NPAF SQTKE 
Sbjct: 311  TMGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQ 369

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
            LT R   FGS+CE+  E++ K+  K+ +   +   A+  +   LKK+DGT+   +    K
Sbjct: 370  LTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALKKSDGTRKSRITNYPK 428

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            LEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++Q
Sbjct: 429  LEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQ 488

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            +L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                      
Sbjct: 489  ILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD---------------------- 526

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFYS 609
                  QDHDGSHIKGL+INF+ S +P LL I  FL+EFITPI+K   T      ++FY+
Sbjct: 527  ------QDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYN 580

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F      D + I+
Sbjct: 581  MPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYID 639

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG 
Sbjct: 640  LAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGF 699

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI 
Sbjct: 700  KPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIY 759

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L  Y+ ED + +EP WY+
Sbjct: 760  LLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYL 819

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+ 
Sbjct: 820  PILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEI 879

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQ 966
                  + Y + G IE++ +  L I ELP R WT   +E+L   +  ND    +I+   +
Sbjct: 880  EP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEE 935

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
              DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +IL
Sbjct: 936  QHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEIL 994

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
             EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL  
Sbjct: 995  SEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELEN 1054

Query: 1087 KGFTPFPK---------NSKSIEAV--VAGAT----DETEESEENPEVVNGVQSI--DYD 1129
             GF  F K         N +  E +  V GAT    DE    E+   V+NG + +   Y+
Sbjct: 1055 LGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYE 1114

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            YLL M I +LT E+ Q LL  + +   E+++L K + + +W  DL A ++   E  + DA
Sbjct: 1115 YLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDA 1174

Query: 1190 RA 1191
             A
Sbjct: 1175 EA 1176


>gi|349580849|dbj|GAA26008.1| K7_Top2p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 1428

 Score = 1103 bits (2853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/1202 (48%), Positives = 783/1202 (65%), Gaps = 78/1202 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL+KIFDEILVNA
Sbjct: 12   YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 71

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNYD
Sbjct: 72   ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 131

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM     P I+  K+G
Sbjct: 132  DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKKG 191

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG  + +++F  Y
Sbjct: 192  PSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 250

Query: 271  VDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
            V++Y KS+                   T  +ER+N RWE+   +S+  FQQ+SFVN IAT
Sbjct: 251  VELYLKSLEKKRQLDNGEDGTAKSDIPTILYERINNRWEVAFAVSDISFQQISFVNSIAT 310

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
              GGTHV+Y+ +Q+    ++ + KK K  +VK+  +KN++++F+N LI+NPAF SQTKE 
Sbjct: 311  TMGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQ 369

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
            LT R   FGS+CE+  E++ K+  K+ +   +   A+  +   LKK+DGT+   +    K
Sbjct: 370  LTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALKKSDGTRKSRITNYPK 428

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            LEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++Q
Sbjct: 429  LEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQ 488

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            +L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                      
Sbjct: 489  ILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD---------------------- 526

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFYS 609
                  QDHDGSHIKGL+INF+ S +P LL I  FL+EFITPI+K   T      ++FY+
Sbjct: 527  ------QDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYN 580

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F      D + I+
Sbjct: 581  MPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYID 639

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG 
Sbjct: 640  LAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGF 699

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI 
Sbjct: 700  KPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIY 759

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L  Y+ ED + +EP WY+
Sbjct: 760  LLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYL 819

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+ 
Sbjct: 820  PILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEI 879

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQ 966
                  + Y + G IE++ +  L I ELP R WT   +E+L   +  ND    +I+   +
Sbjct: 880  EP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEE 935

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
              DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +IL
Sbjct: 936  QHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEIL 994

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
             EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL  
Sbjct: 995  SEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELEN 1054

Query: 1087 KGFTPFPKNSKSIEAV-----------VAGAT----DETEESEENPEVVNGVQSI--DYD 1129
             GF  F K  K                V GAT    DE    E+   V+NG + +   Y+
Sbjct: 1055 LGFPRFNKEGKPYYGSPKDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYE 1114

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            YLL M I +LT E+ + LL  + +   E+++L K + + +W  DL A ++   E  + DA
Sbjct: 1115 YLLGMRIWSLTKERYEKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDA 1174

Query: 1190 RA 1191
             A
Sbjct: 1175 EA 1176


>gi|19880873|gb|AAM00524.1|AF458970_3 TOP2 [Saccharomyces cerevisiae]
          Length = 1428

 Score = 1103 bits (2853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/1202 (48%), Positives = 782/1202 (65%), Gaps = 78/1202 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL+KIFDEILVNA
Sbjct: 12   YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 71

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNYD
Sbjct: 72   ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 131

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM     P I+  K+G
Sbjct: 132  DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKKG 191

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG  + +++F  Y
Sbjct: 192  PSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 250

Query: 271  VDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
            V++Y KS+                   T  +ER+N RWE+   +S+  FQQ+SFVN IAT
Sbjct: 251  VELYLKSLEKKRQLDNGEDGTAKSDIPTILYERINNRWEVAFAVSDISFQQISFVNSIAT 310

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
              GGTHV+Y+ +Q+    +  + KK K  +VK+  +KN++++F+N LI+NPAF SQTKE 
Sbjct: 311  TMGGTHVNYITDQIV-KKILEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQ 369

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
            LT R   FGS+CE+  E++ K+  K+ +   +   A+  +   LKK+DGT+   +    K
Sbjct: 370  LTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALKKSDGTRKSRITNYPK 428

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            LEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++Q
Sbjct: 429  LEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQ 488

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            +L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                      
Sbjct: 489  ILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD---------------------- 526

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFYS 609
                  QDHDGSHIKGL+INF+ S +P LL I  FL+EFITPI+K   T      ++FY+
Sbjct: 527  ------QDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYN 580

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F      D + I+
Sbjct: 581  MPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYID 639

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG 
Sbjct: 640  LAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGF 699

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI 
Sbjct: 700  KPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIY 759

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L  Y+ ED + +EP WY+
Sbjct: 760  LLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYL 819

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+ 
Sbjct: 820  PILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEI 879

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQ 966
                  + Y + G IE++ +  L I ELP R WT   +E+L   +  ND    +I+   +
Sbjct: 880  EP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEE 935

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
              DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +IL
Sbjct: 936  QHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEIL 994

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
             EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL  
Sbjct: 995  SEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELEN 1054

Query: 1087 KGFTPFPKNSKSIEAV-----------VAGAT----DETEESEENPEVVNGVQSI--DYD 1129
             GF  F K  K                V GAT    DE    E+   V+NG + +   Y+
Sbjct: 1055 LGFPRFNKEGKPYYGSPKDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYE 1114

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            YLL M I +LT E+ + LL  + +   E+++L K + + +W  DL A ++   E  + DA
Sbjct: 1115 YLLGMRIWSLTKERYEKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDA 1174

Query: 1190 RA 1191
             A
Sbjct: 1175 EA 1176


>gi|19880901|gb|AAM00548.1|AF458974_3 TOP2 [Saccharomyces cerevisiae]
          Length = 1428

 Score = 1103 bits (2853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/1202 (48%), Positives = 786/1202 (65%), Gaps = 78/1202 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL+KIFDEILVNA
Sbjct: 12   YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 71

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNYD
Sbjct: 72   ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 131

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM     P I+  K+G
Sbjct: 132  DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKKG 191

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG  + +++F  Y
Sbjct: 192  PSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 250

Query: 271  VDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
            V++Y KS+                   T  +ER+N RWE+   +S+  FQQ+SFVN IAT
Sbjct: 251  VELYLKSLEKKRQLDNGEDGTAKSDIPTILYERINNRWEVAFAVSDISFQQISFVNSIAT 310

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
              GGTHV+Y+ +Q+    ++ + KK K  +VK+  +KN++++F+N LI+NPAF SQTKE 
Sbjct: 311  TMGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQ 369

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
            LT R   FGS+CE+  E++ K+  K+ +   +   A+  +   LKK+DGT+   +    K
Sbjct: 370  LTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALKKSDGTRKSRITNYPK 428

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            LEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++Q
Sbjct: 429  LEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQ 488

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            +L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                      
Sbjct: 489  ILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD---------------------- 526

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFYS 609
                  QDHDGSHIKGL+INF+ S +P LL I  FL+EFITPI+K   T      ++FY+
Sbjct: 527  ------QDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYN 580

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F      D + I+
Sbjct: 581  MPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYID 639

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG 
Sbjct: 640  LAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGF 699

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI 
Sbjct: 700  KPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIY 759

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L  Y+ ED + +EP WY+
Sbjct: 760  LLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYL 819

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+ 
Sbjct: 820  PILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEI 879

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQ 966
                  + Y + G IE++ +  L I ELP R WT   +E+L   +  ND    +I+   +
Sbjct: 880  EP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEE 935

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
              DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +IL
Sbjct: 936  QHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEIL 994

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
             EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL  
Sbjct: 995  SEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELEN 1054

Query: 1087 KGFTPFPK---------NSKSIEAV--VAGAT----DETEESEENPEVVNGVQSI--DYD 1129
             GF  F K         N +  E +  V GAT    DE    E+   V+NG + +   Y+
Sbjct: 1055 LGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYE 1114

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            YLL M I +LT E+ + LL  + +   E+++L K + + +W  DL A ++   E  + DA
Sbjct: 1115 YLLGMRIWSLTKERYEKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDA 1174

Query: 1190 RA 1191
             A
Sbjct: 1175 EA 1176


>gi|354547146|emb|CCE43879.1| hypothetical protein CPAR2_501050 [Candida parapsilosis]
          Length = 1443

 Score = 1103 bits (2852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 583/1244 (46%), Positives = 809/1244 (65%), Gaps = 89/1244 (7%)

Query: 9    LTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTM 68
            L + +NA+      P+    E YQK SQLEHIL RPDTYIGS+EK    +W ++ ES++M
Sbjct: 41   LNSFSNASTTSTGKPSNA-SETYQKLSQLEHILKRPDTYIGSVEKTKMEMWCFDAESESM 99

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIH 128
              + ++ VPGLYKIFDEILVNAADNK RDP M  +KV ID E+++I V N G G+PVE+H
Sbjct: 100  KFQEVTIVPGLYKIFDEILVNAADNKIRDPSMKNIKVRIDPENNVIQVFNDGKGIPVEMH 159

Query: 129  QEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKY 188
             +E +Y+PELIFG+LLTSSNYDD+ KK TGGRNG+GAKL NIFST+F +ETAD    K Y
Sbjct: 160  TKEKMYIPELIFGNLLTSSNYDDDQKKVTGGRNGFGAKLCNIFSTQFEVETADLNTGKLY 219

Query: 189  KQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGC 248
            KQ +T+NM K  +P I+  K    +TK++FKPDL+KF+M  L++D+++++++RV DL G 
Sbjct: 220  KQTWTDNMTKVGKPKINALKTKKEYTKITFKPDLSKFDMDSLDEDLLSVLRRRVYDLCGT 279

Query: 249  LGKSVKVELNGHRVPVKSFAEYVDMYPKSV-----------------TRFHERVNERWEI 291
            + K+  + LN  R+PV SF  YV+MY K++                 T  HE  NERWE+
Sbjct: 280  V-KNCNIYLNDKRLPVTSFKSYVEMYVKAIKERSPEPEGEGAPKNYTTIVHEVFNERWEV 338

Query: 292  CVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VKAHNVK 348
               +S+G F QVSFVN IAT  GGTHV YV++Q+   ++  ++KK K      +K + V+
Sbjct: 339  AFAVSDGSFNQVSFVNSIATTAGGTHVKYVSDQIITKLVETLSKKEKGKKKLMIKPNEVR 398

Query: 349  NHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL--SEEFLKKVTAKSGIVETLLSW 406
            +++++F+N LI+NPAF SQTKE LT + S FG K +   S+  + +V  K+GI + +   
Sbjct: 399  DNMFIFINCLIENPAFTSQTKEQLTTKVSQFGGKEKFVASDNLISRV-LKTGIADKIRDI 457

Query: 407  ANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSV 466
            AN  + K L+K DG++   ++G   L DAN AG R+  +CTLILTEG SA  LA+AGL+V
Sbjct: 458  ANANEDKALQKVDGSRKSRIKGQVNLVDANKAGTRDGLKCTLILTEGLSALNLAVAGLTV 517

Query: 467  VGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHL 524
            +GRD +G FPLRGKLLNVREAS++Q+  N+EI ++K+I+GL+    YN  N+KSLRYGH+
Sbjct: 518  IGRDYYGCFPLRGKLLNVREASADQIAKNAEINSLKQIIGLQHKKTYNAENIKSLRYGHI 577

Query: 525  MIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIP 584
            MIMTDQ                            D DGSHIKGL+INF+ + +P LL IP
Sbjct: 578  MIMTDQ----------------------------DQDGSHIKGLIINFLETSFPGLLDIP 609

Query: 585  SFLVEFITPIVKATNKN---GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSK 641
             FL+EFITPIVK T K     K++ FYSMP++E W++   G    W+ KYYKGLGTST  
Sbjct: 610  GFLLEFITPIVKVTVKGRGAKKIIPFYSMPEFETWRDG-EGQTCRWTQKYYKGLGTSTPM 668

Query: 642  EGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIK 701
            E +EYF  +  H K F     +D   I+LAFSKKK + RK+WL  F PGN LD     I 
Sbjct: 669  EAREYFTALDRHLKRFHALQGEDSSCIDLAFSKKKADERKEWLQNFVPGNQLDPALNEIP 728

Query: 702  YSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEH 761
             S+F+NKELILFSM+D  RSIPS++DGLKPGQRK+LF  FKRN   E KVAQ + YVSE+
Sbjct: 729  ISEFINKELILFSMSDNIRSIPSVLDGLKPGQRKVLFGCFKRNLKSEIKVAQLAAYVSEN 788

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
            + YHHGE SL  TI+G+AQ+FVGSNNIN+L+PNG FG+R  GGKDAA+ARYIFT L+ IT
Sbjct: 789  TGYHHGEVSLVQTIIGLAQNFVGSNNINILKPNGAFGSRATGGKDAAAARYIFTELNDIT 848

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            + +F   D+ +  Y+ +D Q +EP WY+P++P +LVNG+EGIGTGWS+ IP+Y+P++IVA
Sbjct: 849  KAIFNPLDNPIYTYVQDDEQTVEPQWYLPVLPMILVNGAEGIGTGWSTNIPSYDPKEIVA 908

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
            N+RRL+N E +E M PWY+G+ G IE    ++    Y ++G IE++++  + I E+P++ 
Sbjct: 909  NLRRLMNNEPLEEMMPWYKGWDGVIEPMGQQK----YKISGKIEQIDDNIVEITEIPVKT 964

Query: 942  WTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLT 999
            WT   +EFL +    ++  ++I+   ++   T + F V LS+  M +  + GLL+KFKL 
Sbjct: 965  WTNTVKEFLLAGFGNEKTPAWIKDMEEHH-TTNIRFVVKLSDAEMEKALKVGLLEKFKLI 1023

Query: 1000 TTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKV 1059
            ++IS  NM  FD  G IKKY+   +IL++F+++RLE+YEKRK   LE L+ +LL +  + 
Sbjct: 1024 SSISLGNMVAFDPYGRIKKYNDVFEILKDFYYVRLEYYEKRKNHMLEMLQRKLLMISEQA 1083

Query: 1060 RFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA----VVAGATDETEESEE 1115
            RF+  ++  E+ V N+K+ DL+  L +  FT F K+   +E+    V     D  EE E 
Sbjct: 1084 RFVKMIIEKELSVANKKKKDLIELLEKHDFTKFTKDGTPVESKGSDVFIDDNDSEEEIEN 1143

Query: 1116 NPEV-----------VNGVQSID-----YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVD 1159
              +V           V G    D     YDYLL M I +LT E+   LL ++  L +E++
Sbjct: 1144 EGDVSALNLKKTEDRVEGEHKPDTIFSSYDYLLGMTIWSLTHERYVKLLNEKSSLQKELE 1203

Query: 1160 DLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGN 1203
             L   +   LW +DLD     + E +   A+  EER  +  +GN
Sbjct: 1204 ILIGKSAIDLWNQDLDVF---MKEYELFLAKDAEEREHLSSSGN 1244


>gi|19880894|gb|AAM00542.1|AF458973_3 TOP2 [Saccharomyces cerevisiae]
 gi|256270263|gb|EEU05481.1| Top2p [Saccharomyces cerevisiae JAY291]
          Length = 1428

 Score = 1103 bits (2852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/1202 (48%), Positives = 786/1202 (65%), Gaps = 78/1202 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL+KIFDEILVNA
Sbjct: 12   YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 71

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNYD
Sbjct: 72   ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 131

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM     P I+  K+G
Sbjct: 132  DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKKG 191

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG  + +++F  Y
Sbjct: 192  PSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 250

Query: 271  VDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
            V++Y KS+                   T  +ER+N RWE+   +S+  FQQ+SFVN IAT
Sbjct: 251  VELYLKSLEKKRQLDNGEDGTARSDIPTILYERINNRWEVAFAVSDISFQQISFVNSIAT 310

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
              GGTHV+Y+ +Q+    ++ + KK K  +VK+  +KN++++F+N LI+NPAF SQTKE 
Sbjct: 311  TMGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQ 369

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
            LT R   FGS+CE+  E++ K+  K+ +   +   A+  +   LKK+DGT+   +    K
Sbjct: 370  LTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALKKSDGTRKSRITNYPK 428

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            LEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++Q
Sbjct: 429  LEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQ 488

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            +L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                      
Sbjct: 489  ILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD---------------------- 526

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFYS 609
                  QDHDGSHIKGL+INF+ S +P LL I  FL+EFITPI+K   T      ++FY+
Sbjct: 527  ------QDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYN 580

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F      D + I+
Sbjct: 581  MPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYID 639

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG 
Sbjct: 640  LAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGF 699

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI 
Sbjct: 700  KPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIY 759

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L  Y+ ED + +EP WY+
Sbjct: 760  LLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYL 819

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+ 
Sbjct: 820  PILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEI 879

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQ 966
                  + Y + G IE++ +  L I ELP R WT   +E+L   +  ND    +I+   +
Sbjct: 880  EP----LRYRMYGRIEQIGDNILEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEE 935

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
              DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +IL
Sbjct: 936  QHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEIL 994

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
             EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL  
Sbjct: 995  SEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELEN 1054

Query: 1087 KGFTPFPK---------NSKSIEAV--VAGAT----DETEESEENPEVVNGVQSI--DYD 1129
             GF  F K         N +  E +  V GAT    DE    E+   V+NG + +   Y+
Sbjct: 1055 LGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYE 1114

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
            YLL M I +LT E+ + LL  + +   E+++L K + + +W  DL A ++   E  + DA
Sbjct: 1115 YLLGMRIWSLTKERYEKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDA 1174

Query: 1190 RA 1191
             A
Sbjct: 1175 EA 1176


>gi|300176867|emb|CBK25436.2| unnamed protein product [Blastocystis hominis]
          Length = 1573

 Score = 1102 bits (2851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 596/1235 (48%), Positives = 796/1235 (64%), Gaps = 74/1235 (5%)

Query: 4    DKRLPLTTSNNANVVGPTAPNK----TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALW 59
            +K+     S+N+     TA  +    T+EE YQK    EH+L RPD YIGS++K TQ +W
Sbjct: 16   NKKTTEVNSDNSRTSDKTASQRRKSLTVEEKYQKLDPREHVLKRPDMYIGSVDKVTQEMW 75

Query: 60   IYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNS 119
            +Y+ E K +++R I+YVPG YKIFDEILVNAADNK  DP MD ++V ID++   I+V N+
Sbjct: 76   VYDREKKGLVYRNITYVPGFYKIFDEILVNAADNKHNDPTMDTIRVDIDRDQGRITVWNN 135

Query: 120  GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
            G G+PV IH+EE VYVP LIFG LLT  N+DDN KK TGGRNG GAKLTNI+S EF +ET
Sbjct: 136  GKGIPVVIHKEEKVYVPSLIFGLLLTGGNFDDNEKKVTGGRNGLGAKLTNIYSLEFSVET 195

Query: 180  ADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK 239
            AD K  K++KQV+ +NM + ++P I K + G  +TK+S+ PDL  F M  ++DD + L++
Sbjct: 196  ADKKEGKEFKQVWFDNMSRCNDPVIKKYR-GKEYTKISYVPDLKLFQMDSIDDDTLGLLE 254

Query: 240  KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY-------PKSVTRFHERVNERWEIC 292
            KRV D+AG    S+KV LNG R+ VK+F  Y+ MY        K     +    ERWE+ 
Sbjct: 255  KRVYDIAGVTDSSLKVYLNGERLNVKNFESYIKMYQNEGATETKENKVVYCNAGERWEVG 314

Query: 293  VTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLW 352
            V +S+G FQQVSFVN I T KGG HVDY+A +V+++++ V  KK K        VK +L+
Sbjct: 315  VGVSDGHFQQVSFVNSICTSKGGKHVDYIAQKVSDYLLPVFKKKLKKDIKLTM-VKQYLY 373

Query: 353  VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS 412
            +FVN  I+NP FDSQ+KETLT     +GS   LSE+FLKKV  K GIV+ +  ++ FK+ 
Sbjct: 374  IFVNCKIENPTFDSQSKETLTKVSKGWGSLPVLSEQFLKKV-EKCGIVDAVSVFSRFKED 432

Query: 413  KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF 472
            + LKK  G KT     I KL+DAN AG R+S+ CTLI+TEGDSAK+L + GLS++GRD +
Sbjct: 433  QMLKKQSGKKTARKLNIPKLDDANFAGTRHSKDCTLIITEGDSAKSLVVGGLSIIGRDYY 492

Query: 473  GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVL 532
            GVFPLRGK+LNVR+ S   V+ N EI N+ +ILGLK    Y++V SLRYG L+IM DQ  
Sbjct: 493  GVFPLRGKMLNVRDVSRAAVIKNEEIHNLVQILGLKFDTVYDDVSSLRYGKLVIMADQ-- 550

Query: 533  LAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 592
                                      D+DGSHIKGL+INF   FWPSLLK+ +FL +FIT
Sbjct: 551  --------------------------DYDGSHIKGLVINFFQVFWPSLLKL-NFLQQFIT 583

Query: 593  PIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITL 652
            PIVKAT K  +   F+++  Y+ W ++       + IKYYKGLGTST +EGKEYF N++ 
Sbjct: 584  PIVKAT-KGRQSFMFFTLQQYKNWLQT-HNEGKGYYIKYYKGLGTSTPQEGKEYFSNLSR 641

Query: 653  HKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELIL 712
            H   F    D +   +++ F KK++  RK+W+ Q++PG+++D     + YSDF++KELI 
Sbjct: 642  HLVPFKSITDDESSHLDMLFRKKRVAERKEWINQYQPGDYIDYAVDKMAYSDFMDKELIQ 701

Query: 713  FSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLA 772
            FS  D  RSIP +VDGLKP QRK+LF +FKR    E KV QFSGYVSEH+AYHHGEQSL 
Sbjct: 702  FSRYDNARSIPCVVDGLKPSQRKVLFGAFKRKLTSEIKVVQFSGYVSEHAAYHHGEQSLN 761

Query: 773  STILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKL 832
             TI+GMAQDFVGSNNINL  P GQFG+R  GGKDAAS RYI+T LSPITR +F +DDD L
Sbjct: 762  DTIIGMAQDFVGSNNINLFVPAGQFGSRLLGGKDAASPRYIYTYLSPITRLIFKEDDDLL 821

Query: 833  LDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMM 892
             +YL E+GQ IEP +Y+PIIP VLVNG+EGIGTG+S+ IPNYNP +I   +   LN E  
Sbjct: 822  CNYLVEEGQSIEPEFYLPIIPMVLVNGAEGIGTGYSTKIPNYNPVEIANYIIAKLNNEKP 881

Query: 893  EPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLES 952
              +HPW+RGF G I K         Y + G I +V++ T  I ELPI RWTQDY++ L  
Sbjct: 882  PELHPWWRGFTGDIYKRPK-----GYLIRGRITKVDDLTYVITELPIGRWTQDYKQILTE 936

Query: 953  II--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
            ++  ++    I  F++   DTTV F V L+ E     + + L K FKL   I+TSN +LF
Sbjct: 937  MMLPEKKAPVIADFKENHTDTTVHFTVMLTPEQAQALQGQDLYKFFKLEAAITTSNFNLF 996

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
             S G I  Y +P+ I++EFF  RL +Y++RK   L   E E+ +L N  RFIL VV G++
Sbjct: 997  SSTGQITHYASPQHIIDEFFEFRLPYYQERKDFLLAKFEKEIRRLSNMTRFILEVVEGKL 1056

Query: 1071 VVNNRKRTDLLLELRQKGFTP-FPK----NSKSIEAVVAGATDETEE------SEEN-PE 1118
            ++NNR R D++ +L ++ + P +P+    +SKS +  +A   DE EE      ++EN  +
Sbjct: 1057 IINNRPRKDIMQDLVKRKYDPIYPEAKKTSSKSGDVEIA-KQDEKEEGVDLDSADENLSK 1115

Query: 1119 VVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
            ++ G     Y+YLLSM I +LT E V  L  + +   +++ +L+   P  LW  DLDA  
Sbjct: 1116 LLKG-----YNYLLSMKIWSLTKELVDELKKNLETAQKKMQELQDTPPSQLWKNDLDAFL 1170

Query: 1179 MQLDELD----KSDARAEEERMKIKGNGNGDAGPK 1209
             QL EL+    K  A  E+ R +   N  G A  +
Sbjct: 1171 SQLLELERQRMKEKAWEEKNRKRSAKNRRGGAASR 1205


>gi|74025306|ref|XP_829219.1| DNA topoisomerase II [Trypanosoma brucei brucei strain 927/4
            GUTat10.1]
 gi|70834605|gb|EAN80107.1| DNA topoisomerase II, putative [Trypanosoma brucei brucei strain
            927/4 GUTat10.1]
          Length = 1424

 Score = 1102 bits (2851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/1206 (46%), Positives = 794/1206 (65%), Gaps = 85/1206 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            +T+EE+YQKK+Q EHIL RPD YIG+IE  T+ +W+Y+E    M  R  ++ PGLYKIFD
Sbjct: 4    RTVEEIYQKKTQHEHILARPDMYIGTIEPVTEDVWVYDEADNVMKLRKCTWTPGLYKIFD 63

Query: 85   EILVNAADNKQRDPK-MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            EILVNAADNK RDP     +KV +D    L+ V+N+G+G+PV+ H+E  ++VPE+IFGHL
Sbjct: 64   EILVNAADNKVRDPHGQTTIKVWVDAARGLVRVYNNGEGIPVQRHREHDLWVPEMIFGHL 123

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LTSSNYDD   K TGGRNG+GAKLTN+FST F +ET   +  KK+   + NNM +  E  
Sbjct: 124  LTSSNYDDTEAKVTGGRNGFGAKLTNVFSTRFEVETVHSRSRKKFFMRWRNNMLENEEAV 183

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            I+ C +G ++T V+F PD  KFN+    +D+V +M++RV D+AGC  KS+   LN  R+ 
Sbjct: 184  ITPC-DGPDYTVVTFYPDFEKFNLEGFTEDMVLIMQRRVYDIAGCTDKSLCCYLNDTRIA 242

Query: 264  VKSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
             +SF EYVD+YP    +     + RVN+RWE+CV +S   FQQVSFVN IAT +GGTHV 
Sbjct: 243  CRSFPEYVDLYPTMGEERKPSSYSRVNDRWEVCVRVSNVGFQQVSFVNSIATTRGGTHVK 302

Query: 320  YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
            Y+ +Q+   V     +K+K   VK H ++ HL++FVN+LI+NP+FDSQTKETL   ++ F
Sbjct: 303  YIVDQIIAKVTDQAMRKSK-TEVKPHMIRPHLFIFVNSLIENPSFDSQTKETLNTPKARF 361

Query: 380  GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK-KNDGTKTEDVRGISKLEDANLA 438
            GS C+L    +  V  KS IVE  +  AN + ++++  K   T  + + GI KL+DAN A
Sbjct: 362  GSTCDLPASLIDCVL-KSSIVERAVEMANSRLNREMAMKMRNTNRKQILGIPKLDDANEA 420

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            GG+ S++CTLILTEGDSAKAL  AGL+V  RD FGVFPLRGK LNVR+AS  +V+  +E 
Sbjct: 421  GGKYSQRCTLILTEGDSAKALCTAGLAVENRDYFGVFPLRGKPLNVRDASVKKVMGCAEF 480

Query: 499  GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
              + KI+GL    +Y + + LRYGHLMIM+DQ                            
Sbjct: 481  QAVSKIMGLDLSQKYTSTEGLRYGHLMIMSDQ---------------------------- 512

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT-----NKNGKVLSFYSMPDY 613
            DHDGSHIKGL+IN IH++WP LLK+P FL +FITPIVKA      N +   +SF+SMPDY
Sbjct: 513  DHDGSHIKGLIINMIHNYWPDLLKVPGFLQQFITPIVKARKKGRGNNDEGTISFFSMPDY 572

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
              WK ++G    ++ ++YYKGLGTS +KEG+EYF+NI  H+ +FV+ED +D + I +AF+
Sbjct: 573  FEWKNAVGEGIKNYELRYYKGLGTSGAKEGREYFENIDRHRLNFVYEDRKDDDDIVMAFA 632

Query: 674  KKKIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            K K++ RK+W+ +F+   ++++   Y    + YS+FV+KELILFS+AD +RSIPS+VDGL
Sbjct: 633  KDKVDERKRWITEFKANTNINESMNYNVRNVSYSEFVHKELILFSVADCERSIPSVVDGL 692

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRKI+F +FKRN ++  KVAQ +GYVSEH+AYHHGEQSL  TI+G+AQD+VG+NN+ 
Sbjct: 693  KPGQRKIMFSAFKRNLVRSLKVAQLAGYVSEHAAYHHGEQSLVQTIVGLAQDYVGANNVP 752

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL  +GQFGTR QGGKD A+ RYIFTRL+ I R ++   DD +++Y ++DG  +EP +Y+
Sbjct: 753  LLYRDGQFGTRLQGGKDHAAGRYIFTRLTDIARRIYHPSDDFIVEYRDDDGLSVEPFYYV 812

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            P+IP VLVNG+ GIGTG+++ IPNY+P D++ N+ RLL+GE ++PM PWY GF GTIE+ 
Sbjct: 813  PVIPMVLVNGTAGIGTGFATNIPNYSPLDVIDNLNRLLSGEELQPMKPWYFGFTGTIEE- 871

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSD 969
              +E G  +  +G      +  + I ELPI  WTQ Y++FLE + ++    +  +R+++ 
Sbjct: 872  --REKG-KFVSSGCATVRPDGVVHITELPIGTWTQQYKKFLEDLRER--EIVIQYREHNT 926

Query: 970  DTTVDFEVFLSEESMMRTKQEGLLK-KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
            D TVDFEVF+  E + +   +G ++ + +L   I  +N+  FD +G I KY   E +L+E
Sbjct: 927  DVTVDFEVFIHPEVLRQWVAQGCVEERLQLREYIHATNIIAFDREGKITKYLDAESVLKE 986

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ +RLE+Y +R++  LE L+   LKLEN VRF+  V++G  +V  R   D+L +L+Q+G
Sbjct: 987  FYLVRLEYYARRREFLLEQLQRAALKLENMVRFVNEVIDGTFIVTRRSMKDVLKDLKQRG 1046

Query: 1089 FTPFPKNSK-------------------------SIEAV-----VAGATDETEESEENPE 1118
            +TPFP   K                           E+V     V G    T E EE   
Sbjct: 1047 YTPFPPQQKKKMSSTTIVDEEDNDGARKILPDVFEFESVPLCEQVIGKILCTAEPEE-IN 1105

Query: 1119 VVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
            +  GV  ++YDYLLS+ +  LT+E        R+++  + + +  A+ + LW +DLD L 
Sbjct: 1106 MWKGVL-VEYDYLLSLRMVDLTVEMAMYFRTKREQMLNKHNFVLSASSKDLWREDLDLLR 1164

Query: 1179 MQLDEL 1184
              +++L
Sbjct: 1165 SDIEKL 1170


>gi|46136571|ref|XP_389977.1| hypothetical protein FG09801.1 [Gibberella zeae PH-1]
          Length = 1650

 Score = 1102 bits (2850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1205 (47%), Positives = 789/1205 (65%), Gaps = 87/1205 (7%)

Query: 13   NNANVVGPTAP--NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIH 70
            ++ ++  P  P   KT  EMY K +QL+HIL RPDTYIGS+E+  Q LW+  +E++ M +
Sbjct: 87   DSMSIESPAKPAKQKTATEMYTKLTQLQHILKRPDTYIGSVERTEQQLWVLNKETQLMEY 146

Query: 71   RTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQE 130
            + I++VPGLYKIFDEILVNAADNKQRD  M  +K+ ID+E  +ISV N+G G+P+ +H++
Sbjct: 147  KAINFVPGLYKIFDEILVNAADNKQRDSSMTYMKINIDREAGVISVENNGKGIPIVLHEK 206

Query: 131  EGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQ 190
            E +Y+PELIFGHLL  SN+DD+ KKT GGRNGYGAKL N+FSTEF +E  D    KKYKQ
Sbjct: 207  ENIYIPELIFGHLLAGSNFDDDEKKTVGGRNGYGAKLCNVFSTEFNLECQDSVSGKKYKQ 266

Query: 191  VFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCL 249
             +T+NM    +  I+  K   ++T+++FKPD  +F M   ++DD+ +LM +RV D+ G +
Sbjct: 267  TWTDNMNTMHKAKITASKSA-SYTRITFKPDFKRFGMEDGIDDDLESLMYRRVYDMVGTI 325

Query: 250  GKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE------------------RWEI 291
             + +KV LNG +V +K F  Y D+Y KS+ +  +R++E                  RWE+
Sbjct: 326  -RGIKVFLNGEQVKIKDFKAYCDLYAKSIAK--DRLDEEGGSPTCTVEMDKDKSHPRWEV 382

Query: 292  CVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHL 351
               +S+G FQQVSFVN IAT  GGTHV+Y+A+Q+   ++  +NKK K   +K ++++NH+
Sbjct: 383  GFAVSDGTFQQVSFVNSIATTAGGTHVNYIADQITKSLLNTLNKKRKGHTLKQNHLRNHI 442

Query: 352  WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQ 411
            +VF+N  IDNPAF SQTKE +T + S FGSKC L ++FLKKV AKS  ++ +L  A  K 
Sbjct: 443  FVFINCYIDNPAFSSQTKEQMTTKASQFGSKCTLGDDFLKKV-AKSDAIQNILDMAEKKA 501

Query: 412  SKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDR 471
             K + K+DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++  DR
Sbjct: 502  DKMMAKSDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAILDPDR 560

Query: 472  FGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQV 531
             GVFPLRGKLLNVR+AS +Q+  N EI NIK+ LGLK    Y + K+LRYGHLMIM DQ 
Sbjct: 561  IGVFPLRGKLLNVRDASPDQIAKNQEIQNIKQFLGLKHKTSYTDTKNLRYGHLMIMADQ- 619

Query: 532  LLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI 591
                                       DHDGSHIKGLLINF+   +PSLL+IP F  EFI
Sbjct: 620  ---------------------------DHDGSHIKGLLINFLEVQFPSLLRIPDFFREFI 652

Query: 592  TPIVKA-----TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEY 646
            TPIVK        K  K+ SF++ P+YE WK+      + W  KY+KGLGTS++++ + Y
Sbjct: 653  TPIVKVWQGPNPKKPQKLKSFFTQPEYEEWKDVHKNELTRWHSKYFKGLGTSSNEDAQVY 712

Query: 647  FQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFV 706
            F N+  H K+F     ++ + +ELAFSKKK +ARK+WL  F PG  LD   K I YSDF+
Sbjct: 713  FTNLDDHLKEFEVMKPEESKMLELAFSKKKADARKEWLGNFVPGTFLDHSAKQICYSDFI 772

Query: 707  NKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHH 766
            N+ELILFSMAD  RSIPS++DG KPGQRK+++  FKRN IK+ KV + +GYVSE +AYHH
Sbjct: 773  NRELILFSMADNMRSIPSVLDGFKPGQRKVIYACFKRNLIKDKKVVELAGYVSEQTAYHH 832

Query: 767  GEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLF- 825
            GEQSL  TI+G+AQ+FVGSNNIN L+P+G FG+R  GG DAAS RY FTRLSP  R +F 
Sbjct: 833  GEQSLQQTIIGLAQNFVGSNNINCLEPSGNFGSRLAGGSDAASPRYTFTRLSPFARKIFH 892

Query: 826  PKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRR 885
            P D+  LL +  EDG++IEP  Y PI+P VLVNG++GIGTGWSS IPNY+P DIV N+RR
Sbjct: 893  PMDEPNLLHHY-EDGKKIEPMVYAPILPMVLVNGADGIGTGWSSNIPNYHPADIVQNLRR 951

Query: 886  LLNGEM---------MEPMHPWYRGFGGTIEKTAS---KEAGVTYTVTGIIEEVNETTLR 933
             + G +          E M PW+RG+ GT E       K  GV Y       E  +  + 
Sbjct: 952  RM-GRLDENDTEEKPFETMMPWFRGWKGTPEAAGPDRYKFNGVAYA-----NEQKDNEIV 1005

Query: 934  IKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEG 991
            I ELPIR WT D++  LE +I  +   S+I+ +++++D +TV FE+ + ++ M +  +EG
Sbjct: 1006 ITELPIRVWTDDFKAKLEKVISGELGPSWIKDYKEFNDHSTVHFEIAVDDKHMGKVMEEG 1065

Query: 992  LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
            +L++FKLT  ++TSN+  FD+ G I+KY+  E+ILEEF+  RL+ Y  RKK  L     +
Sbjct: 1066 ILERFKLTKQVATSNLVAFDTSGRIRKYEKVEEILEEFYQYRLDMYTDRKKHWLGVYHAD 1125

Query: 1052 LLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF-PKNSKSIEAVVAGATDET 1110
            L KL+N+ RFI  +++ ++VV  +K+  L+ ELR + +  F P+  K   A      D+ 
Sbjct: 1126 LRKLQNQARFIKEIIDNKLVVGKKKKAVLVQELRDRDYEAFPPRGDKKKTADEEEEDDDN 1185

Query: 1111 EESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLW 1170
            ++ E + E   G +  DYDYLLSM I +LT E+++ L    +K   E ++L   + + LW
Sbjct: 1186 QDVEGDSE--GGAR--DYDYLLSMPIWSLTAERLEKLKQAIEKKKAEHEELLALSEKDLW 1241

Query: 1171 VKDLD 1175
             +DLD
Sbjct: 1242 CRDLD 1246


>gi|398409176|ref|XP_003856053.1| hypothetical protein MYCGRDRAFT_98287 [Zymoseptoria tritici IPO323]
 gi|339475938|gb|EGP91029.1| hypothetical protein MYCGRDRAFT_98287 [Zymoseptoria tritici IPO323]
          Length = 1677

 Score = 1101 bits (2848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 592/1230 (48%), Positives = 808/1230 (65%), Gaps = 83/1230 (6%)

Query: 20   PTAPNKT--IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVP 77
            P AP K     + YQ+ +QLEHIL RPDTYIGS+E+ T+ +W++  E++ M +R +S+VP
Sbjct: 106  PKAPAKKGGASDQYQRLTQLEHILKRPDTYIGSVERTTEQMWVFNSETEVMENRKVSFVP 165

Query: 78   GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
            GLYKIFDEILVNAADNKQRD  M  ++V +++E   ISV N+G G+P+E+H +EG+Y+PE
Sbjct: 166  GLYKIFDEILVNAADNKQRDKNMTEMRVWVNREQGCISVRNNGRGIPIEMHAKEGIYIPE 225

Query: 138  LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
            +IFGHLLT SNYDD+  KTTGGRNGYGAKL NI+STEF ++T D K  ++Y+QV+ NNM 
Sbjct: 226  MIFGHLLTGSNYDDDQAKTTGGRNGYGAKLANIYSTEFELDTVDMKTKQRYRQVWKNNMS 285

Query: 198  KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL 257
               + NI K K GD++T+++FKPD  KF M  ++DD  AL+K+RV D+AG + K +KV L
Sbjct: 286  VMGKANIGKVKSGDDYTQITFKPDFRKFGMDQMDDDFEALVKRRVYDMAGTV-KGLKVYL 344

Query: 258  NGHRVPVKSFAEYVDMYPKSVTR--------------FHERVNERWEICVTLSEGQFQQV 303
            N  R+ +  F +Y++MY K++                  +  +ERWEI   +S+G FQQV
Sbjct: 345  NDTRIKISKFKQYMEMYTKAIKTENAANNGDAPEQVILTDSPHERWEIGFAVSDGSFQQV 404

Query: 304  SFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN---ANVKAHNVKNHLWVFVNALID 360
            SFVN IAT  GG+HV+Y+A+Q+ + +   VNKK  N     +K   +KNH+++FVN+ I 
Sbjct: 405  SFVNSIATTHGGSHVNYIADQICDKLEEHVNKKKNNQGGVKLKKAQIKNHIFLFVNSQIV 464

Query: 361  NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG 420
            NPAF SQTKE LT + SSFGSK ++SE+FLK +  K+  V  ++ +A  K  K L K+DG
Sbjct: 465  NPAFTSQTKEQLTTKVSSFGSKPQVSEKFLKDIL-KTEAVSNIIHFAQQKADKLLSKSDG 523

Query: 421  TKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGK 480
             +   +   SKL DAN AG ++  +CTLILTEGDSA  LA+AG +VV  D FGVFPLRGK
Sbjct: 524  NRRTRMNN-SKLTDANKAGTKDGHRCTLILTEGDSAALLALAGRAVVNPDHFGVFPLRGK 582

Query: 481  LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLL 540
            +LNVR+AS +Q+  N+EI NIKK LGL+   EY + KSLRYGHLMIMTDQ          
Sbjct: 583  ILNVRDASVDQISKNAEIQNIKKFLGLQHKKEYTDAKSLRYGHLMIMTDQ---------- 632

Query: 541  WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---A 597
                              DHDGSHIKGLLINF+   +PSLLKIP FL+EFITPIVK    
Sbjct: 633  ------------------DHDGSHIKGLLINFLQVQFPSLLKIPEFLLEFITPIVKVWKG 674

Query: 598  TNKNGKV-LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKD 656
              KN K    F++MP+YEAW++   GN   W  KY+KGLGTS +++ + YF ++  H K 
Sbjct: 675  DPKNPKAKRDFFTMPEYEAWRQE-PGNQKGWDHKYFKGLGTSDTRDAQIYFSDLDKHLKT 733

Query: 657  FVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKE-KYIKYSDFVNKELILFSM 715
            F    + + E I+LAFSKKK +ARK WL  F PG +LD    + I Y DF+NKELILFSM
Sbjct: 734  FHTMQEGEPELIDLAFSKKKADARKTWLGNFVPGTYLDMSSTEDITYDDFINKELILFSM 793

Query: 716  ADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTI 775
            AD  RSIPS+VDGLKPGQRK+++  F+RN  K+ KV + +G VS  +AY +GE SL  TI
Sbjct: 794  ADNMRSIPSVVDGLKPGQRKVMYTCFRRNLKKDVKVVELAGSVSGLTAYSYGETSLQQTI 853

Query: 776  LGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDY 835
            +G+AQ FVGSNNIN+L+P+G FG+R QGG DAASARYI+TRLSP  R LF + D+ LL Y
Sbjct: 854  VGLAQTFVGSNNINILEPSGNFGSRLQGGSDAASARYIYTRLSPFARRLFHQTDEALLTY 913

Query: 836  LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG---EMM 892
              +DG+ IEP  Y+PI+P +L+NG++GIGTGWS+ IPNY P +++AN++R ++G   E M
Sbjct: 914  NTDDGKTIEPEMYIPIVPMILINGADGIGTGWSTSIPNYRPEEVIANLKRRMDGDSKESM 973

Query: 893  EPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLES 952
             PM PW+RG+ G  E+ A +     Y   G I +     + I ELP+R WTQD+++ LE 
Sbjct: 974  VPMMPWFRGWTGVTEQLADER----YKFGGKIRKSGPNEVEITELPVRYWTQDFKDKLEE 1029

Query: 953  II--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
            I+  ++  SFI+ + +Y+    V F +   EE  M+  +E L + FKL+ T++TSN+  F
Sbjct: 1030 ILKAEKTPSFIKDYTEYNTPEDVHF-IIKMEEKKMQENEEKLEELFKLSRTMATSNLVAF 1088

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D +G I KY TP  I+EEF+H+RL  Y KRK   L  ++ EL KL N+ RFI  +++G++
Sbjct: 1089 DPQGRIHKYATPLDIMEEFYHVRLRMYHKRKAYMLSEMQRELEKLTNQARFIKMIIDGKL 1148

Query: 1071 VVNNRKRTDLLLELRQKGFTPFPKNSKS-----IEAVVAGATDETEESEENPEVVNGVQS 1125
            VV+ +K++ L+ EL++  FT FPK + +      EAVV     E  E++++ +   G   
Sbjct: 1149 VVSKKKKSVLVTELQKLNFTRFPKVTDARKEGEFEAVVQ----ENHEADDDEDTAAGAS- 1203

Query: 1126 IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQL 1181
             DYDYLL MAI +LT E+V+ L+       +E+  L   + + LW  DLD L      QL
Sbjct: 1204 -DYDYLLGMAIWSLTQERVEKLMRQIGDKEDEITVLTSKSAQDLWKTDLDELLAEWHTQL 1262

Query: 1182 DELDKSD--ARAEEERMKIKGNGNGDAGPK 1209
            +E    D   +++  R   K    G AG K
Sbjct: 1263 EEEVARDKKVKSKTRRRSAKLGVGGKAGKK 1292


>gi|68480866|ref|XP_715586.1| DNA topoisomerase II [Candida albicans SC5314]
 gi|68480977|ref|XP_715530.1| DNA topoisomerase II [Candida albicans SC5314]
 gi|46437155|gb|EAK96506.1| DNA topoisomerase II [Candida albicans SC5314]
 gi|46437215|gb|EAK96565.1| DNA topoisomerase II [Candida albicans SC5314]
          Length = 1461

 Score = 1101 bits (2847), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/1294 (44%), Positives = 824/1294 (63%), Gaps = 102/1294 (7%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E YQK SQLEHIL RPDTYIGS+EK    +W ++ E+++M+ + ++ VPGLYKIFDEILV
Sbjct: 60   ETYQKLSQLEHILKRPDTYIGSVEKTKTEMWCFDAETESMVFKEVTIVPGLYKIFDEILV 119

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNK RDP M  ++V ID E+++I V N G G+P+E+H +E +Y+PELIFG+LLTSSN
Sbjct: 120  NAADNKIRDPSMKNIRVKIDAENNIIEVMNDGKGIPIEMHTKENMYIPELIFGNLLTSSN 179

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD+ KK TGGRNG+GAKL NIFST+F +ETAD    K YKQ +TNNM   S+P I+  +
Sbjct: 180  YDDDQKKVTGGRNGFGAKLCNIFSTQFEVETADLNMGKLYKQSWTNNMSNVSKPKITTLR 239

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
                +TK++F+PDL+KF+M  L++D+++++++RV DL G + K+  + LN  R+ + SF 
Sbjct: 240  PKKEYTKITFRPDLSKFDMDCLDNDLLSVLRRRVYDLCGTV-KNCNIYLNDKRLNISSFK 298

Query: 269  EYVDMYPKSV------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIA 310
             YV+MY K++                  T  HE  N+RWE+   +S+G F QVSFVN IA
Sbjct: 299  GYVEMYVKAIKERSPEPEPQDGTIKNFTTIVHEVFNDRWEVAFAVSDGSFNQVSFVNSIA 358

Query: 311  TIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VKAHNVKNHLWVFVNALIDNPAFDSQ 367
            T  GGTHV YV++Q+ N ++  ++KK K      +K   V++++++F+N LI+NPAF SQ
Sbjct: 359  TTSGGTHVKYVSDQIINKLVETLSKKEKGKKKLMIKPQEVRDNMFLFINCLIENPAFTSQ 418

Query: 368  TKETLTLRQSSFGSKCE-LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV 426
            TKE LT + S FG K + ++ + L     K+ IV+ + + AN  + K L+K DG++   +
Sbjct: 419  TKEQLTTKVSQFGGKDKFVANDNLINRILKTSIVDKIRAIANANEDKALQKADGSRKSRI 478

Query: 427  RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
            +G   L DAN AG ++   CTLILTEG SA  LA+AGLSVVGRD +G FPLRGKLLNVRE
Sbjct: 479  KGQVNLVDANKAGTKDGHNCTLILTEGLSAMNLAVAGLSVVGRDYYGCFPLRGKLLNVRE 538

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            AS++Q+  N+EI ++K+I+GL+    Y   N+KSLRYGH+MIMTDQ              
Sbjct: 539  ASADQISKNAEINSLKQIIGLQHKKVYTAENIKSLRYGHIMIMTDQ-------------- 584

Query: 545  IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK---- 600
                          D DGSHIKGL+INF+ + +P LL IP FL+EFITPIVK T K    
Sbjct: 585  --------------DQDGSHIKGLIINFLETSFPGLLDIPGFLLEFITPIVKVTVKARGA 630

Query: 601  -NGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
               +V+ FY+MP++E W+++  G    W+ KYYKGLGTST  E +EYF  +  H K F  
Sbjct: 631  GGKRVIPFYTMPEFEHWRDT-EGKQCRWTQKYYKGLGTSTPMEAREYFTALDRHLKRFHA 689

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
               +D + I+LAFSKKK + RK+WL  F PG HLD +   I  SDF+NKELILFSM+D  
Sbjct: 690  LQGEDKDYIDLAFSKKKADERKEWLQGFLPGTHLDPEITEIPISDFINKELILFSMSDNV 749

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS++DG KPGQRK+L+  FK+    E KVAQ +GYVSE++ YHHGEQSL  TI+G+A
Sbjct: 750  RSIPSVLDGFKPGQRKVLYGCFKKKLRSEIKVAQLAGYVSENTGYHHGEQSLVQTIIGLA 809

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNIN+L+PNG FG+R  GGKD ++ARYIFT LS ITR +F   DD L  Y+ +D
Sbjct: 810  QNFVGSNNINVLKPNGSFGSRAAGGKDFSAARYIFTELSEITRKIFNPLDDPLYTYVQDD 869

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q +EP WY+P++P +LVNG+EGIGTGWS+ IP+YNP+D+V N+RRL+NGE ++ M PWY
Sbjct: 870  EQTVEPEWYLPVLPMILVNGAEGIGTGWSTNIPSYNPKDLVTNIRRLMNGEELQEMTPWY 929

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQN 957
            +G+GG +E    ++    + V+G IE+++  T+ I E+P++ WT + +EFL S    ++ 
Sbjct: 930  KGWGGDLEPMGPQK----FKVSGRIEQIDSNTVEITEIPVKTWTNNVKEFLLSGFGNEKT 985

Query: 958  DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIK 1017
              +I+   ++   T++ F + L++  M ++ + GLL++FKL +++S +NM  FD  G IK
Sbjct: 986  QPWIKDMEEHH-TTSIRFVIKLTDAEMQKSLRIGLLERFKLVSSLSLANMVAFDPMGRIK 1044

Query: 1018 KYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
            KY+   +I+++F+++RLE+Y+KRK    +NL+ +LL L  + RFI  ++  ++ V N+K+
Sbjct: 1045 KYNDVLEIIKDFYYVRLEYYQKRKDYMTDNLQNQLLMLSEQARFIKMIIEKQLSVANKKK 1104

Query: 1078 TDLLLELRQKGFTPFPKNSKSIE-----------------------------AVVAGATD 1108
              L+  L +  FT F K+ K I+                             +V      
Sbjct: 1105 KQLVALLEEHNFTKFSKDGKPIKSSEELLTGDDADEEEETQEQEGDEDVGNTSVANIQEG 1164

Query: 1109 ETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPES 1168
            E E++   PE +       YDYLL MAI +LT E+   ++  RD+   E++ L   + + 
Sbjct: 1165 EPEQAAHVPETIYS----SYDYLLGMAIWSLTYERFMRIMQQRDQKEAELNALLSKSAKD 1220

Query: 1169 LWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNN 1228
            LW +DLD     L E DK   R E+ER  +  NG   +  +     A K+   N K    
Sbjct: 1221 LWNQDLDEF---LAEFDKFLLRDEQERESLASNGKKKSTKRRAKATATKDQPNNKKVKVE 1277

Query: 1229 ARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLD 1262
             +  +++     V K    + +A     P EK D
Sbjct: 1278 PKEKKSISAKPVVKKEASNEPQASSSSKPKEKDD 1311


>gi|2501297|sp|P87078.1|TOP2_CANAL RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|2113829|emb|CAA71405.1| topoisomerase II [Candida albicans]
          Length = 1461

 Score = 1100 bits (2844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 572/1254 (45%), Positives = 810/1254 (64%), Gaps = 106/1254 (8%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E YQK SQLEHIL RPDTYIGS+EK    +W ++ E+++M+ + ++ VPGLYKIFDEILV
Sbjct: 60   ETYQKLSQLEHILKRPDTYIGSVEKTKTEMWCFDAETESMVFKEVTIVPGLYKIFDEILV 119

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNK RDP M  ++V ID E+++I V N G G+P+E+H +E +Y+PELIFG+LLTSSN
Sbjct: 120  NAADNKIRDPSMKNIRVKIDAENNIIEVMNDGKGIPIEMHTKENMYIPELIFGNLLTSSN 179

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD+ KK TGGRNG+GAKL NIFST+F +ETAD    K YKQ +TNNM   S+P I+  +
Sbjct: 180  YDDDQKKVTGGRNGFGAKLCNIFSTQFEVETADLNMGKLYKQSWTNNMSNVSKPKITTLR 239

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
                +TK++F+PDL+KF+M  L++D+++++++RV DL G + K+  + LN  R+ + SF 
Sbjct: 240  TKKEYTKITFRPDLSKFDMDCLDNDLLSVLRRRVYDLCGTV-KNCNIYLNDKRLNISSFK 298

Query: 269  EYVDMYPKSV------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIA 310
             YV+MY K++                  T  HE  N+RWE+   +S+G F QVSFVN IA
Sbjct: 299  GYVEMYVKAIKERSPEPEPQDGTIKNFTTIVHEVFNDRWEVAFAVSDGSFNQVSFVNSIA 358

Query: 311  TIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VKAHNVKNHLWVFVNALIDNPAFDSQ 367
            T  GGTHV YV++Q+ N ++  ++KK K      +K   V++++++F+N LI+NPAF SQ
Sbjct: 359  TTSGGTHVKYVSDQIINKLVETLSKKEKGKKKLMIKPQEVRDNMFLFINCLIENPAFTSQ 418

Query: 368  TKETLTLRQSSFGSKCE-LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV 426
            TKE LT + S FG K + ++ + L     K+ IV+ + + AN  + K L+K DG++   +
Sbjct: 419  TKEQLTTKVSQFGGKDKFVANDNLINRILKTSIVDKIRAIANANEDKALQKADGSRKSRI 478

Query: 427  RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
            +G   L DAN AG ++   CTLILTEG SA  LA+AGLSVVGRD +G FPLRGKLLNVRE
Sbjct: 479  KGQVNLVDANKAGTKDGHNCTLILTEGLSAMNLAVAGLSVVGRDYYGCFPLRGKLLNVRE 538

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            AS++Q+  N+EI ++K+I+GL+    Y   N+KSLRYGH+MIMTDQ              
Sbjct: 539  ASADQISKNAEINSLKQIIGLQHKKVYTAENIKSLRYGHIMIMTDQ-------------- 584

Query: 545  IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK---- 600
                          D DGSHIKGL+INF+ + +P LL IP FL+EFITPIVK T K    
Sbjct: 585  --------------DQDGSHIKGLIINFLETSFPGLLDIPGFLLEFITPIVKVTVKARGA 630

Query: 601  -NGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
               +V+ FY+MP++E W+++  G    W+ KYYKGLGTST  E +EYF  +  H K F  
Sbjct: 631  GGKRVIPFYTMPEFEHWRDT-EGKQCRWTQKYYKGLGTSTPMEAREYFTALDRHLKRFHA 689

Query: 660  EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
               +D + I+LAFSKKK + RK+WL  F PG HLD +   I  SDF+NKE ILFSM+D  
Sbjct: 690  LQGEDKDYIDLAFSKKKADERKEWLQGFLPGTHLDPEITEIPISDFINKEFILFSMSDNV 749

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            RSIPS++DG KPGQRK+L+  FK+    E KVAQ +GYVSE++ YHHGEQSL  TI+G+A
Sbjct: 750  RSIPSVLDGFKPGQRKVLYGCFKKKLRSEIKVAQLAGYVSENTGYHHGEQSLVQTIIGLA 809

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+FVGSNNIN+L+PNG FG+R  GGKD ++ARYIFT LS ITR +F   DD L  Y+ +D
Sbjct: 810  QNFVGSNNINVLKPNGSFGSRAAGGKDFSAARYIFTELSEITRKIFNPLDDPLYTYVQDD 869

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             Q +EP WY+P++P +LVNG+EGIGTGWS+ IP+YNP+D+V N+RRL+NGE ++ M PWY
Sbjct: 870  EQTVEPEWYLPVLPMILVNGAEGIGTGWSTNIPSYNPKDLVTNIRRLMNGEELQEMTPWY 929

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQN 957
            +G+GG +E    ++    + V+G IE+++  T+ I E+P++ WT + +EFL S    ++ 
Sbjct: 930  KGWGGDLEPMGPQK----FKVSGRIEQIDSNTVEITEIPVKTWTNNVKEFLLSGFGNEKT 985

Query: 958  DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIK 1017
              +I+   ++   T++ F V L++  M ++ + GLL++FKL +++S +NM  FD  G IK
Sbjct: 986  QPWIKDMEEHH-TTSIRFVVKLTDAEMQKSLRIGLLERFKLVSSLSLANMVAFDPMGRIK 1044

Query: 1018 KYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
            KY+   +I+++F+++RLE+Y+KRK    +NL+ +LL L  + RFI  ++  ++ V N+K+
Sbjct: 1045 KYNDVLEIIKDFYYVRLEYYQKRKDYMTDNLQNQLLMLSEQARFIKMIIEKQLSVANKKK 1104

Query: 1078 TDLLLELRQKGFTPFPKNSKSIE-----------------------------AVVAGATD 1108
              L+  L +  FT F K+ K I+                             +V      
Sbjct: 1105 KQLVALLEEHNFTKFSKDGKPIKSSEELLTGDDADEEEETQEQEGDEDVGNTSVANIQEG 1164

Query: 1109 ETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPES 1168
            E E++   PE +       YDYLL MAI +LT E+   ++  RD+   E++ L   + + 
Sbjct: 1165 EPEQAAHVPETIYS----SYDYLLGMAIWSLTYERFMRIMQQRDQKEAELNALLSKSAKD 1220

Query: 1169 LWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKN 1222
            LW +DLD     L E DK   R E+ER  +  NG      K   +RA   A K+
Sbjct: 1221 LWNQDLDEF---LAEFDKFLLRDEQERESLASNGK----KKSTKRRAKATATKD 1267


>gi|149234581|ref|XP_001523170.1| DNA topoisomerase 2 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146453279|gb|EDK47535.1| DNA topoisomerase 2 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 1492

 Score = 1100 bits (2844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/1243 (47%), Positives = 797/1243 (64%), Gaps = 106/1243 (8%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E YQK SQLEHIL RPDTYIGS+EK    +W ++ ES++M  + ++ VPGLYKIFDEILV
Sbjct: 81   ETYQKLSQLEHILKRPDTYIGSVEKTRTEMWCFDVESESMKFQEVTIVPGLYKIFDEILV 140

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNK RDP M  +KV ID E+++I V N G G+PVEIH +E +Y+PELIFG+LLTSSN
Sbjct: 141  NAADNKIRDPSMKNIKVKIDPENNVIQVMNDGKGIPVEIHTKEKMYIPELIFGNLLTSSN 200

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD+ KK TGGRNG+GAKL NIFST+F +ETAD    K YKQV+T+NM K  +P I+  K
Sbjct: 201  YDDDQKKVTGGRNGFGAKLCNIFSTQFEVETADLNTGKLYKQVWTDNMTKVGKPKITTLK 260

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
                +TK++F PDL KF M  L++D+++++++RV DL G + ++  + LN  R+ V SF 
Sbjct: 261  TKKEYTKITFMPDLQKFGMDSLDEDLLSVLRRRVYDLCGTV-RNCNIYLNDKRLSVNSFK 319

Query: 269  EYVDMY------------------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIA 310
             YV+MY                  P + T  HE  N+RWE+   +S+G F QVSFVN IA
Sbjct: 320  AYVEMYVKAIRERSPEPEGDAESKPATTTIVHEVFNDRWEVAFAVSDGNFNQVSFVNSIA 379

Query: 311  TIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VKAHNVKNHLWVFVNALIDNPAFDSQ 367
            T  GGTHV YV++Q+   ++  ++K+ K      +K   V++++++F+N+LI+NPAF SQ
Sbjct: 380  TTAGGTHVKYVSDQIITKLVETLSKREKGKKKLMIKPQEVRDNMFIFINSLIENPAFTSQ 439

Query: 368  TKETLTLRQSSFGSKCE-LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV 426
            TKE LT + S FG K + ++ E L     K+GI + + + AN  + K L+K DG+K   +
Sbjct: 440  TKEQLTTKPSQFGGKEKFIATENLINRILKTGIADKIRAIANANEDKALQKADGSKKLRI 499

Query: 427  RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
            +    L DAN AG ++  +CTLILTEG SA  LA+AGL+VVGRD +G FPLRGKLLNVRE
Sbjct: 500  KNQVNLVDANKAGTKDGLKCTLILTEGLSALNLAVAGLTVVGRDYYGCFPLRGKLLNVRE 559

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            AS++QV  N EI  +K+I+GL+    Y   N+KSLRYGH+MIMTDQ              
Sbjct: 560  ASADQVSKNIEINALKQIIGLQHKKVYTQENIKSLRYGHIMIMTDQ-------------- 605

Query: 545  IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT-NKNG- 602
                          D DGSHIKGL+INF+ + +P LL IP FL++FITPIVK T N  G 
Sbjct: 606  --------------DQDGSHIKGLIINFLETSFPGLLDIPGFLLQFITPIVKVTVNGRGA 651

Query: 603  -KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWED 661
             KV+ FYSMP++EAW+E  G N   W+ KYYKGLGTST  E +EYF  +  H K F    
Sbjct: 652  KKVIPFYSMPEFEAWREGEGQNCR-WTQKYYKGLGTSTPLEAREYFTALDRHLKRFHALQ 710

Query: 662  DQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
             +D   I+LAFSKKK + RK+WL  F PG++LD +   I  SDF+NKELILFSM+D  RS
Sbjct: 711  GEDASCIDLAFSKKKADDRKEWLQNFVPGDNLDPEMNEIPISDFINKELILFSMSDNVRS 770

Query: 722  IPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQD 781
            IPSM+DGLKPGQRKIL+  FKR    E KVAQ + YV++ S+YHHGEQSL  TI+ MAQ+
Sbjct: 771  IPSMLDGLKPGQRKILYGCFKRKLKNEIKVAQLAAYVADVSSYHHGEQSLVQTIIAMAQN 830

Query: 782  FVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQ 841
            FVGSNNINLL+PNG FG+R  GGKDAA+ARYIFT L+ ITR +F + DD LL+YL +D  
Sbjct: 831  FVGSNNINLLKPNGAFGSRATGGKDAAAARYIFTELNEITRTIFNEADDPLLNYLQDDES 890

Query: 842  QIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRG 901
             +EP WY+P++P +LVNG++GIGTGWS+ IP+YNP DIVAN+RRL+ GE ME M+PWY+G
Sbjct: 891  TVEPQWYLPVLPMILVNGADGIGTGWSTNIPSYNPLDIVANLRRLMRGEPMEEMNPWYKG 950

Query: 902  FGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFI 961
            + G IEK   ++    + ++G IE++++ T+ I E+P++ WT   +EFL + +  N+  +
Sbjct: 951  WYGDIEKVGPQK----FKISGRIEQIDDNTIEISEVPVKTWTNTVKEFLLAGLG-NEKTV 1005

Query: 962  RGFRQYSDD--TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKY 1019
            +  +   +   T++ F V LS+  M +    GLL+KFKL +TIS +NM  FD  G IKKY
Sbjct: 1006 QWIKDMEEQHTTSIRFVVKLSDAEMAKALSVGLLEKFKLVSTISLANMVAFDPHGRIKKY 1065

Query: 1020 DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTD 1079
                 I+++F+ +RLE+YEKRK   LE L+ +   +  + RFI  +++ ++ V N+K+ +
Sbjct: 1066 LDVLDIVKDFYFVRLEYYEKRKNHMLEILQHKHSMISEQARFIKMIIDKQLSVANKKKKE 1125

Query: 1080 LLLELRQKGFTPFPKNSKSIEAVVAGA--------------------------------- 1106
            L+  L    F  F K+ + IE VV                                    
Sbjct: 1126 LIGILEANKFLKFTKDGRPIEQVVVDDDDDDEDEDVIDGAGGAGVDGIAGGEADISQLNL 1185

Query: 1107 --TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKA 1164
               DE   +E  PE V    S  YDY+L M I +LT E+   LLA+++K   ++ DL   
Sbjct: 1186 KEVDENPTNEHRPETV----SSSYDYILGMTIWSLTHERYVKLLAEKEKYQNQLQDLVSK 1241

Query: 1165 TPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAG 1207
            T   LW+ DLD     ++  +   AR E+ER  +   GN   G
Sbjct: 1242 TSVDLWMHDLDVF---VEAYELFLAREEQERESLSTGGNKKNG 1281


>gi|408399894|gb|EKJ78984.1| hypothetical protein FPSE_00841 [Fusarium pseudograminearum CS3096]
          Length = 1652

 Score = 1099 bits (2842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1194 (48%), Positives = 784/1194 (65%), Gaps = 85/1194 (7%)

Query: 22   APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
            A  KT  EMY K +QL+HIL RPDTYIGS+E+  Q LW+  +E++ M ++ I++VPGLYK
Sbjct: 98   AKQKTATEMYTKLTQLQHILKRPDTYIGSVERTEQQLWVLNKETQLMEYKAINFVPGLYK 157

Query: 82   IFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            IFDEILVNAADNKQRD  M  +K+ ID+E  +ISV N+G G+P+ +H++E +Y+PELIFG
Sbjct: 158  IFDEILVNAADNKQRDSSMTYMKINIDREAGVISVENNGKGIPIVLHEKENIYIPELIFG 217

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            HLL  SN+DD+ KKT GGRNGYGAKL N+FSTEF +E  D    KKYKQ +T+NM    +
Sbjct: 218  HLLAGSNFDDDEKKTVGGRNGYGAKLCNVFSTEFNLECQDSVSGKKYKQTWTDNMNTMHK 277

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
              I+  K   ++T+++FKPD  +F M   ++DD+ +LM +RV D+ G + + +KV LNG 
Sbjct: 278  AKITASKSA-SYTRITFKPDFKRFGMEDGIDDDLESLMYRRVYDMVGTI-RGIKVFLNGE 335

Query: 261  RVPVKSFAEYVDMYPKSVTRFHERVNE------------------RWEICVTLSEGQFQQ 302
            +V +K F  Y D+Y KS+ +  +R++E                  RWE+   +S+G FQQ
Sbjct: 336  QVKIKDFKAYCDLYAKSIAK--DRLDEEGGSPICTVEMDKDKSHPRWEVGFAVSDGTFQQ 393

Query: 303  VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNP 362
            VSFVN IAT  GGTHV+Y+A+Q+   ++  +NKK K   +K ++++NH++VF+N  IDNP
Sbjct: 394  VSFVNSIATTAGGTHVNYIADQITKSLLNTLNKKRKGHTLKQNHLRNHIFVFINCYIDNP 453

Query: 363  AFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
            AF SQTKE +T + S FGSKC L +EFLKKV AKS  ++ +L  A  K  K + K+DG K
Sbjct: 454  AFSSQTKEQMTTKASQFGSKCALGDEFLKKV-AKSDAIQNILDMAEKKADKMMAKSDGNK 512

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
               V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++  DR GVFPLRGKLL
Sbjct: 513  RSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAILDPDRIGVFPLRGKLL 571

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            NVR+AS +Q+  N EI NIK+ LGLK    Y + K+LRYGHLMIM DQ            
Sbjct: 572  NVRDASPDQIAKNQEIQNIKQFLGLKHKTSYTDTKNLRYGHLMIMADQ------------ 619

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA----- 597
                            DHDGSHIKGLLINF+   +PSLL+IP F  EFITPIVK      
Sbjct: 620  ----------------DHDGSHIKGLLINFLEVQFPSLLRIPDFFREFITPIVKVWQGPN 663

Query: 598  TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDF 657
              K  K+ SF++ P+YE WK+      + W  KY+KGLGTS++++ + YF N+  H K+F
Sbjct: 664  PKKPQKLKSFFTQPEYEEWKDVHKNELTRWHSKYFKGLGTSSNEDAQVYFTNLDDHLKEF 723

Query: 658  VWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMAD 717
                 ++ + +ELAFSKKK +ARK+WL  F PG  LD   K I YSDF+N+ELILFSMAD
Sbjct: 724  EVMKPEESKMLELAFSKKKADARKEWLGNFVPGTFLDHSAKQICYSDFINRELILFSMAD 783

Query: 718  LQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
              RSIPS++DG KPGQRK+++  FKRN IK+ KV + +GYVSE +AYHHGEQSL  TI+G
Sbjct: 784  NMRSIPSVLDGFKPGQRKVIYACFKRNLIKDKKVVELAGYVSEQTAYHHGEQSLQQTIIG 843

Query: 778  MAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLF-PKDDDKLLDYL 836
            +AQ+FVGSNNIN L+P+G FG+R  GG DAAS RY FTRLSP  R +F P D+  LL + 
Sbjct: 844  LAQNFVGSNNINCLEPSGNFGSRLAGGSDAASPRYTFTRLSPFARKIFHPMDEPNLLHHY 903

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM----- 891
             EDG++IEP  Y PI+P VLVNG++GIGTGWSS IPNY+P DIV N+RR + G +     
Sbjct: 904  -EDGKKIEPMVYAPILPMVLVNGADGIGTGWSSNIPNYHPADIVHNLRRRM-GRLDENDT 961

Query: 892  ----MEPMHPWYRGFGGTIEKTAS---KEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQ 944
                 E M PW+RG+ GT E       K  GV Y       E  +  + I ELPIR WT 
Sbjct: 962  EEKPFETMMPWFRGWKGTPEAAGPDRYKFNGVAYA-----NEQKDNEIVITELPIRVWTD 1016

Query: 945  DYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTI 1002
            D++  LE +I  +   S+I+ +++++D +TV FE+ + ++ M +  +EG+L++FKLT  +
Sbjct: 1017 DFKAKLEKVISGELGPSWIKDYKEFNDHSTVHFEIAVDDKHMGKVMEEGILERFKLTKQV 1076

Query: 1003 STSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFI 1062
            +TSN+  FD+ G I+KY+  E+ILEEF+  RL+ Y  RKK  L     +L KL+N+ RFI
Sbjct: 1077 ATSNLVAFDTSGRIRKYEKVEEILEEFYQYRLDMYTDRKKHWLGVYHADLRKLQNQARFI 1136

Query: 1063 LGVVNGEIVVNNRKRTDLLLELRQKGFTPF-PKNSKSIEAVVAGATDETEESEENPEVVN 1121
              +++ ++VV  +K+  L+ ELR + +  F P+  K   A      ++ +E E + E   
Sbjct: 1137 KEIIDNKLVVGKKKKAVLVQELRDRDYEAFPPRGDKKKTADEEEEDEDNQEVEGDSE--G 1194

Query: 1122 GVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            G +  DYDYLLSM I +LT E+++ L    +K   E ++L   + + LW +DLD
Sbjct: 1195 GAR--DYDYLLSMPIWSLTAERLEKLKQAIEKKKAEHEELLALSEKDLWCRDLD 1246


>gi|67538472|ref|XP_663010.1| hypothetical protein AN5406.2 [Aspergillus nidulans FGSC A4]
 gi|40743376|gb|EAA62566.1| hypothetical protein AN5406.2 [Aspergillus nidulans FGSC A4]
 gi|259485149|tpe|CBF81963.1| TPA: DNA topoisomerase 2 (EC 5.99.1.3)
            [Source:UniProtKB/TrEMBL;Acc:O59864] [Aspergillus
            nidulans FGSC A4]
          Length = 1709

 Score = 1098 bits (2841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1187 (48%), Positives = 803/1187 (67%), Gaps = 74/1187 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK +  EHI +RPD+YIGS+E+ TQ +W+Y  E   M  R +SYVPGLYKIFDEI+VNA
Sbjct: 120  YQKLNLREHITIRPDSYIGSVERTTQEMWVYNSEIDGMEFREVSYVPGLYKIFDEIVVNA 179

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ D  MD ++V   +E + ISV N+G G+PVE+H+E G+Y+P+LIFG+LLTSSNYD
Sbjct: 180  ADNKQNDDNMDEIRVTYSRETNEISVWNNGKGIPVEMHEEHGMYIPQLIFGNLLTSSNYD 239

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  +K TGGRNG+GAKL N+FSTEF +ET D K+ K+Y Q +T+NM    +P I+  K G
Sbjct: 240  DAKEKITGGRNGFGAKLCNVFSTEFTVETQDSKQKKRYLQTWTDNMQTVGKPKITAAK-G 298

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             ++T+V+FK D  +F M  ++DD  AL+K+RV DLAG  G  V V+LNG R+PV++F +Y
Sbjct: 299  SDFTRVTFKADFPRFGMDGIDDDFEALIKRRVYDLAGTTG--VTVKLNGTRLPVRNFKKY 356

Query: 271  VDMYPKSVTRFHERVNE--------------RWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            ++MY K++ R  ER ++               WEI   +S+G F+QVSFVN IAT  GGT
Sbjct: 357  MEMYTKAIRR--ERGDDDSKSDPIITCSPHPYWEIGFAVSDGSFKQVSFVNSIATTSGGT 414

Query: 317  HVDYVANQVANHVMAVV--NKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            HV+Y+A+Q+A  +   +  NKK   + +K   ++N+ ++FVNA I NPAF SQTKE LT 
Sbjct: 415  HVNYIADQIAGKLSESLKKNKKGTGSILKPAQIRNYCFLFVNAKIVNPAFSSQTKEQLTT 474

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED 434
            +Q+ FGSK  L E FLKKV A SG++++L  +A+ K    LKK+DG +   +    KL D
Sbjct: 475  KQTQFGSKPILDESFLKKV-ANSGVLDSLKRFADHKADLMLKKSDGGRRSRMNN-PKLTD 532

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG ++  +CTLILTEG+SAK LAMAG +VVG D FGV+PLRGK+LNVR+AS +Q+  
Sbjct: 533  ANRAGTKDGYKCTLILTEGESAKGLAMAGRAVVGADLFGVYPLRGKMLNVRDASFDQISK 592

Query: 495  NSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
            N EI +IK  +GL+   EY + K LRYGHLMIMTDQ                        
Sbjct: 593  NEEIQSIKNFMGLQHKKEYTDTKGLRYGHLMIMTDQ------------------------ 628

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFYSM 610
                DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPIVK    +     K  SF+++
Sbjct: 629  ----DHDGSHIKGLLINFLEAQFPSLLKIPEFLIEFITPIVKVWKGDIKDPTKQHSFFTI 684

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
             +Y AWKE   G+   W  KYYKGLGTS+++E +EYF+++  H K+F    D++ E IEL
Sbjct: 685  QEYNAWKEK-HGHERGWEHKYYKGLGTSSTEEAQEYFRDLDRHLKEFHVMQDKEHELIEL 743

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AFSKKK+E RK+WL Q+ P   +D     I Y+DF+N ELI FSMAD  RSIPSMVDG+K
Sbjct: 744  AFSKKKVEERKEWLRQYNPDTFMDHSVAKISYTDFINNELIQFSMADNLRSIPSMVDGMK 803

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+++   KRN  K+ KV   +G V   +AYHHG+ S+  TI+G+AQDFVGSNN+N 
Sbjct: 804  PGQRKVMYTVMKRNIKKDVKVLDLTGQVFSLTAYHHGDASMHQTIIGLAQDFVGSNNVNT 863

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+P+G FG+R +GG DA+SARYI TRLSP  R +F   DD +L YL +DG++IEP  Y+P
Sbjct: 864  LEPSGNFGSRLKGGADASSARYIHTRLSPFARKIFHPHDDPILKYLEDDGKEIEPWVYVP 923

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTA 910
            ++P +L+NG++GIGTGWS+ IPNYNP DIV N++R++ GE ++PM PW++GF G + +  
Sbjct: 924  VVPMILINGADGIGTGWSTSIPNYNPEDIVDNLKRMIRGEEIKPMQPWFKGFKGEVTQLG 983

Query: 911  SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYS 968
              +    Y  +G+I++V++  L + ELPIR WTQD+   LE +I  D+  S I+ ++ Y+
Sbjct: 984  PDK----YKFSGLIKQVSDKELEVTELPIRTWTQDFINKLEEMIKADKAPSLIKDYKDYN 1039

Query: 969  DDTTVDFEVFLSEESMMRT-KQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILE 1027
             ++ V   + L E+++     QE L +KFKL+ TI+T+N+  F+++G + KY   E ILE
Sbjct: 1040 TNSDVHLVLQLDEKNVKEPLTQEFLEEKFKLSKTIATTNLVAFNAEGQMTKYPNVEAILE 1099

Query: 1028 EFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK 1087
            EF+ +RL+FY KRK+ QL+ L++EL KL N+ RF+  +++G++VV+ +K++ L+ EL   
Sbjct: 1100 EFYRLRLKFYGKRKQHQLDQLQIELEKLTNQARFVQMIIDGDLVVSKKKKSVLVKELDSL 1159

Query: 1088 GFTPFPKNSKSIEAVVAGATDETEES--EENPEVVNGVQSI--DYDYLLSMAIGTLTLEK 1143
            GF  F   +K+ +A  AG T++  E+  +E+ E  +  Q +   +DYLL MAI +LT E+
Sbjct: 1160 GFKRF---NKTADAAKAGETEKVIEASEDEDTEAQDDTQDLAHAFDYLLGMAIWSLTQER 1216

Query: 1144 VQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDELDK 1186
            V+ L     +   E+D+L K + E +W++DLD        QL E D+
Sbjct: 1217 VEKLRRQIGEKEHEIDELIKLSSEDIWLRDLDEFINEWRFQLSETDR 1263


>gi|401623896|gb|EJS41976.1| top2p [Saccharomyces arboricola H-6]
          Length = 1427

 Score = 1098 bits (2841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/1238 (47%), Positives = 796/1238 (64%), Gaps = 89/1238 (7%)

Query: 18   VGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVP 77
            V PT+ +    + YQK SQL+HIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VP
Sbjct: 3    VEPTSAS----DRYQKISQLDHILKRPDTYIGSVETQEQQQWIYDEETDCMIEKNVTIVP 58

Query: 78   GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
            GL+KIFDEILVNAADNK RD  M  + V I+ E + I V N G G+PVEIH +EG+Y+PE
Sbjct: 59   GLFKIFDEILVNAADNKVRDLSMKRIDVNINPEENTIEVKNDGKGIPVEIHSKEGIYIPE 118

Query: 138  LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
            LIFGHLLTSSNYDD+ KK TGGRNGYGAKL NIFSTEF +ETAD    KKY Q +  NM 
Sbjct: 119  LIFGHLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFTLETADLNAGKKYIQKWEKNMS 178

Query: 198  KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL 257
              + P I+  K+G ++TKV+F+PDL++F M  L++D++ +M++RV D+ G + + + V L
Sbjct: 179  ICNPPKITSYKKGPSYTKVTFRPDLSRFGMESLDNDILGVMRRRVYDINGSV-RGINVYL 237

Query: 258  NGHRVPVKSFAEYVDMYPKSV-------------------TRFHERVNERWEICVTLSEG 298
            NG  + +++F  YV++Y KS+                   T  +ER+NERWE+   +S+ 
Sbjct: 238  NGKFLKIRNFKNYVELYLKSLEKKRQLDNGQDATAQTSIPTILYERINERWEVAFAVSDI 297

Query: 299  QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNAL 358
             FQQ+SFVN IAT  GGTHV+YV +Q+   +  ++ KKNK + VK   +KN++++F+N L
Sbjct: 298  SFQQISFVNSIATTMGGTHVNYVTDQIVRKISDLLKKKNKKS-VKPFQIKNNMFIFINCL 356

Query: 359  IDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN 418
            ++NPAF SQTKE LT R   FGS+CE+  E++ K+  K+ +   +   A+      LKK+
Sbjct: 357  VENPAFTSQTKEQLTTRVKDFGSRCEIPNEYINKIM-KTDLAIKMFEIADANADNALKKS 415

Query: 419  DGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLR 478
            DGT+   +    KL+DAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLR
Sbjct: 416  DGTRKNRITDYPKLQDANKAGTKAGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLR 475

Query: 479  GKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSF 538
            GK+LNVREASS+Q+  N+EI  IKKI+GL+    Y + KSLRYGHLMIMTDQ        
Sbjct: 476  GKMLNVREASSDQISKNAEIQAIKKIMGLQHRKNYEDTKSLRYGHLMIMTDQ-------- 527

Query: 539  LLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA- 597
                                DHDGSHIKGL+INF+ S +P LL I  FL+EFITPIVK  
Sbjct: 528  --------------------DHDGSHIKGLIINFLESSFPGLLDIEGFLLEFITPIVKVF 567

Query: 598  -TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKD 656
             T      +SFY+MPDYE WK+    +  +W  KYYKGLGTS +K+ +EYF N+  H K 
Sbjct: 568  ITKPKKNTISFYNMPDYEKWKQE-ESHKFTWKQKYYKGLGTSLAKDIREYFSNLDKHLKI 626

Query: 657  FVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMA 716
            F      D + I+LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+A
Sbjct: 627  FHSLQGNDKDYIDLAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLA 686

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D  RSIP+++DG KPGQRK+L+  FK+N   E KVAQ + YV E +AYHHGE+SLA TI+
Sbjct: 687  DNIRSIPNVLDGFKPGQRKVLYGCFKKNLKSEIKVAQLAPYVGECTAYHHGEESLAQTII 746

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
            G+AQ+FVGSNNI LL PNG FGTR  GGKDAA++RYI+T L+ +TR +F   DD L  Y+
Sbjct: 747  GLAQNFVGSNNIYLLLPNGAFGTRATGGKDAAASRYIYTELNKLTRMIFHPSDDPLYKYI 806

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +D + +EP WY+PI+P VLVNG+EGIGTGWS+YIP +NP +IV N+R L+N E ME MH
Sbjct: 807  QDDEKTVEPEWYLPILPMVLVNGAEGIGTGWSTYIPPFNPLEIVKNIRHLMNNEEMELMH 866

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ 956
            PW+RG+ GT+E+       + Y + G IE+V   TL I ELP R WT   +E+L   +  
Sbjct: 867  PWFRGWSGTMEEIEP----LRYRMYGRIEQVGSNTLEITELPARTWTSTIKEYLLLGLSG 922

Query: 957  NDS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
            ND    +I+   +  +D  + F + LS E M +T++ G  ++FKL   IS  NM  FD  
Sbjct: 923  NDKIKPWIKDMEEQHND-NIKFIITLSPEEMAKTRKIGFYERFKLIAPISLRNMVAFDPS 981

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G IKKY++  +IL EF++IRLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+VV 
Sbjct: 982  GKIKKYNSVNEILSEFYYIRLEYYQKRKDHMSEILQWEVEKYSFQVKFIKMIIEKELVVT 1041

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSK----SIEAVVAGATDETEES-----------EENPE 1118
            N+ R  ++ EL   GF    K  +    S +  +A   D+   +           E+   
Sbjct: 1042 NKPRKAIIQELENLGFPRINKQGQPYYGSPKTEMAEQIDDMRSATSDEEDEESSHEDTET 1101

Query: 1119 VVNGVQSI--DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDA 1176
            +VNG + +   Y+YLL M I +LT E+ + LL  + +   E+++L K + + +W+ DL+A
Sbjct: 1102 IVNGPEELYGTYEYLLGMKIWSLTKERYEKLLKQKQEKETELENLLKLSAKDIWIADLEA 1161

Query: 1177 LDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKR 1214
             D+   E  K D  A       +G    D G K   KR
Sbjct: 1162 FDIGYQEFLKRDKDA-------RGGNVPDKGDKSKGKR 1192


>gi|55773630|dbj|BAA28664.2| typeII DNA topoisomerase [Emericella nidulans]
          Length = 1709

 Score = 1098 bits (2840), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1187 (48%), Positives = 803/1187 (67%), Gaps = 74/1187 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK +  EHI +RPD+YIGS+E+ TQ +W+Y  E   M  R +SYVPGLYKIFDEI+VNA
Sbjct: 120  YQKLNLREHITIRPDSYIGSVERTTQEMWVYNSEIDGMEFREVSYVPGLYKIFDEIVVNA 179

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNKQ D  MD ++V   +E + ISV N+G G+PVE+H+E G+Y+P+LIFG+LLTSSNYD
Sbjct: 180  ADNKQNDDNMDEIRVTYSRETNEISVWNNGKGIPVEMHEEHGMYIPQLIFGNLLTSSNYD 239

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  +K TGGRNG+GAKL N+FSTEF +ET D K+ K+Y Q +T+NM    +P I+  K G
Sbjct: 240  DAKEKITGGRNGFGAKLCNVFSTEFTVETQDSKQKKRYLQTWTDNMQTVGKPKITAAK-G 298

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             ++T+V+FK D  +F M  ++DD  AL+K+RV DLAG  G  V V+LNG R+PV++F +Y
Sbjct: 299  SDFTRVTFKADFPRFGMDGIDDDFEALIKRRVYDLAGTTG--VTVKLNGTRLPVRNFKKY 356

Query: 271  VDMYPKSVTRFHERVNE--------------RWEICVTLSEGQFQQVSFVNGIATIKGGT 316
            ++MY K++ R  ER ++               WEI   +S+G F+QVSFVN IAT  GGT
Sbjct: 357  MEMYTKAIRR--ERGDDDSKSDPIITCSPHPYWEIGFAVSDGSFKQVSFVNSIATTSGGT 414

Query: 317  HVDYVANQVANHVMAVV--NKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            HV+Y+A+Q+A  +   +  NKK   + +K   ++N+ ++FVNA I NPAF SQTKE LT 
Sbjct: 415  HVNYIADQIAGKLSESLKKNKKGTGSILKPAQIRNYCFLFVNAKIVNPAFSSQTKEQLTT 474

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED 434
            +Q+ FGSK  L E FLKKV A SG++++L  +A+ K    LKK+DG +   +    KL D
Sbjct: 475  KQTQFGSKPILDESFLKKV-ANSGVLDSLKRFADHKADLMLKKSDGGRRSRMNN-PKLTD 532

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG ++  +CTLILTEG+SAK LAMAG +VVG D FGV+PLRGK+LNVR+AS +Q+  
Sbjct: 533  ANRAGTKDGYKCTLILTEGESAKGLAMAGRAVVGADLFGVYPLRGKMLNVRDASFDQISK 592

Query: 495  NSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
            N EI +IK  +GL+   EY + K LRYGHLMIMTDQ                        
Sbjct: 593  NEEIQSIKNFMGLQHKKEYTDTKGLRYGHLMIMTDQ------------------------ 628

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFYSM 610
                DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPIVK    +     K  SF+++
Sbjct: 629  ----DHDGSHIKGLLINFLEAQFPSLLKIPEFLIEFITPIVKVWKGDIKDPTKQHSFFTI 684

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
             +Y AWKE   G+   W  KYYKGLGTS+++E +EYF+++  H K+F    D++ E IEL
Sbjct: 685  QEYNAWKEK-HGHERGWEHKYYKGLGTSSTEEAQEYFRDLDRHLKEFHVMQDKEHELIEL 743

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AFSKKK+E RK+WL Q+ P   +D     I Y+DF+N ELI FSMAD  RSIPSMVDG+K
Sbjct: 744  AFSKKKVEERKEWLRQYNPDTFMDHSVAKISYTDFINNELIQFSMADNLRSIPSMVDGMK 803

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+++   KRN  K+ KV   +G V   +AYHHG+ S+  TI+G+AQDFVGSNN+N 
Sbjct: 804  PGQRKVMYTVMKRNIKKDVKVLDLTGQVFSLTAYHHGDASMHQTIIGLAQDFVGSNNVNT 863

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+P+G FG+R +GG DA+SARYI TRLSP  R +F   DD +L YL +DG++IEP  Y+P
Sbjct: 864  LEPSGNFGSRLKGGADASSARYIHTRLSPFARKIFHPHDDPILKYLEDDGKEIEPWVYVP 923

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTA 910
            ++P +L+NG++GIGTGWS+ IPNYNP DIV N++R++ GE ++PM PW++GF G + +  
Sbjct: 924  VVPMILINGADGIGTGWSTSIPNYNPEDIVDNLKRMIRGEEIKPMQPWFKGFKGEVTQLG 983

Query: 911  SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYS 968
              +    Y  +G+I++V++  L + ELPIR WTQD+   LE +I  D+  S I+ ++ Y+
Sbjct: 984  PDK----YKFSGLIKQVSDKELEVTELPIRTWTQDFINKLEEMIKADKAPSLIKDYKDYN 1039

Query: 969  DDTTVDFEVFLSEESMMRT-KQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILE 1027
             ++ V   + L E+++     QE L +KFKL+ TI+T+N+  F+++G + KY   E ILE
Sbjct: 1040 TNSDVHLVLQLDEKNVKEPLTQEFLEEKFKLSKTIATTNLVAFNAEGQMTKYPNVEAILE 1099

Query: 1028 EFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK 1087
            EF+ +RL+FY KRK+ QL+ L++EL KL N+ RF+  +++G++VV+ +K++ L+ EL   
Sbjct: 1100 EFYRLRLKFYGKRKQHQLDQLQIELEKLTNQARFVHMIIDGDLVVSKKKKSVLVKELDSL 1159

Query: 1088 GFTPFPKNSKSIEAVVAGATDETEES--EENPEVVNGVQSI--DYDYLLSMAIGTLTLEK 1143
            GF  F   +K+ +A  AG T++  E+  +E+ E  +  Q +   +DYLL MAI +LT E+
Sbjct: 1160 GFKRF---NKTADAAKAGETEKVIEASEDEDTEAQDDTQDLAHAFDYLLGMAIWSLTQER 1216

Query: 1144 VQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DMQLDELDK 1186
            V+ L     +   E+D+L K + E +W++DLD        QL E D+
Sbjct: 1217 VEKLRRQIGEKEHEIDELIKLSSEDIWLRDLDEFINEWRFQLSETDR 1263


>gi|403218545|emb|CCK73035.1| hypothetical protein KNAG_0M01820 [Kazachstania naganishii CBS 8797]
          Length = 1432

 Score = 1097 bits (2837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/1204 (47%), Positives = 774/1204 (64%), Gaps = 77/1204 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K+  E YQK SQLEHIL RPDTYIGS+E   Q  WI+++E   M+ + +S VPGL+KIFD
Sbjct: 7    KSASERYQKISQLEHILKRPDTYIGSVEIQEQHQWIFDDEIDCMVEKQVSIVPGLFKIFD 66

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP M  + V I  E +LI V N G G+P+EIH +E VY+PELIFG LL
Sbjct: 67   EILVNAADNKVRDPTMKRIDVSIIPEENLIEVKNDGKGIPIEIHSKEKVYIPELIFGQLL 126

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ KK TGGRNGYGAKL NIFSTEFI+ETAD K  KKY Q + NNM     P I
Sbjct: 127  TSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETADPKAGKKYIQKWENNMTTCHPPEI 186

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +  K+  ++TK+SFKPDL++F M +L+ D++ +M++RV D+ G +   V V LNG  + +
Sbjct: 187  TSYKKVSSYTKISFKPDLSRFGMENLDSDILGVMRRRVYDINGSVA-DVNVYLNGKFLKI 245

Query: 265  KSFAEYVDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSF 305
            K+F  YV++Y KS+                   T  +E+++ RWEI   +S+  FQQ+SF
Sbjct: 246  KNFKNYVELYLKSLEKKRQLDSGQEVETDAKIPTILYEKISNRWEIAFAVSDISFQQISF 305

Query: 306  VNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFD 365
            VN IAT  GGTHV+Y+ +Q+   V  ++ K+ KN  +K   +KN++++F+N LI+NPAF 
Sbjct: 306  VNSIATTTGGTHVNYIVDQIVRKVSDMLKKRKKN--IKPFQIKNNMFIFINCLIENPAFT 363

Query: 366  SQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED 425
            SQTKE LT R   FGS+CE+  +F+ K+  K+ +   +   A+      LKK+DGT+   
Sbjct: 364  SQTKEQLTTRIKDFGSRCEIPGDFVNKI-MKTDLATKIFEIADENAHNQLKKSDGTRKSR 422

Query: 426  VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
            +    KLEDAN AG ++S +CTLILTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVR
Sbjct: 423  ITEYPKLEDANKAGTKDSYKCTLILTEGDSALSLAVAGLAVVGRDFYGCYPLRGKILNVR 482

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
            EAS++Q+L N+EI  IKKI+GL+    Y + K+LRYGHLMIMTDQ               
Sbjct: 483  EASADQILKNAEIQAIKKIMGLQHRKNYEDTKTLRYGHLMIMTDQ--------------- 527

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT--NKNGK 603
                         DHDGSHIKGL+INF+ S +P LL IP FLVEFITPIVK T      +
Sbjct: 528  -------------DHDGSHIKGLIINFLESSFPGLLDIPGFLVEFITPIVKVTITKPRKQ 574

Query: 604  VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
            V++FY++PDYE W+     +  +W  KYYKGLGTS+S+E +EYF ++  H K F      
Sbjct: 575  VIAFYNIPDYEKWRLE-EAHKFTWKQKYYKGLGTSSSQEVREYFSDLDKHLKTFHQLQGN 633

Query: 664  DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIP 723
            D + IELAFSKKK + RK+WL Q+EPG  LD K   I  SDF+NKELILFS+AD  RSIP
Sbjct: 634  DKDLIELAFSKKKADDRKEWLRQYEPGTVLDPKISDIPISDFINKELILFSLADNIRSIP 693

Query: 724  SMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFV 783
            S++DG KPGQRK+LF +FKRN   E KVAQ +  V++ +AYHH E+SLA TI+GMAQ+FV
Sbjct: 694  SVLDGFKPGQRKVLFATFKRNLRSEIKVAQLAPSVAQFTAYHHAEESLAQTIIGMAQNFV 753

Query: 784  GSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQI 843
            GSNNI LL PNG FGTR  GGKDAA+ RYIFT L+ +TR +F   DD L  Y+ +D   +
Sbjct: 754  GSNNIYLLMPNGAFGTRATGGKDAAATRYIFTELNKLTRKIFHPSDDPLYSYVQDDEMTV 813

Query: 844  EPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFG 903
            EP WY+P+IP +LVNG EGIGTGWS+ IP +NP DIV N+  L+NGE +E MHPWYRG+ 
Sbjct: 814  EPEWYLPVIPMLLVNGGEGIGTGWSTNIPPFNPLDIVKNIGHLMNGEDLEEMHPWYRGWT 873

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRG 963
            G++EKT  +     Y + G IE+    TL I ELP + WT   +E L   +  N+     
Sbjct: 874  GSLEKTEPQR----YRMYGRIEQTGPCTLEITELPAKTWTTTIKEHLLLGLSGNERTKAW 929

Query: 964  FRQYSDDTT--VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDT 1021
             +   +  T  + F V L+ E M +T++ G  ++FKL + IS  NM  FD +G I+KYD 
Sbjct: 930  IKDMEEQHTNNIRFIVTLTPEEMTKTRKIGFYERFKLISPISLQNMVAFDPRGKIRKYDN 989

Query: 1022 PEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLL 1081
              +IL EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+ R +++
Sbjct: 990  VNEILSEFYYVRLEYYQKRKDYMSERLQWEVEKYSFQVKFIKMIIENELKVTNKPRKEII 1049

Query: 1082 LELRQKGFTPFPK------------NSKSI---EAVVAGATDETEESEENPEVVNGVQSI 1126
             EL + GF    K             S++I           DE   +E+  E +NG +  
Sbjct: 1050 KELTELGFPRINKLGKPHYGTTDEETSRAIEEATEEEENMADEDLVTEDGTEEINGPEDE 1109

Query: 1127 --DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL 1184
               ++YLL M I +LT E+   LL  + +   E++ L K + + +W  DL+      +E 
Sbjct: 1110 FGTFEYLLGMRIWSLTKERYNRLLKQKQEKEVELEALLKLSAKDIWNTDLEEFSKGYEEF 1169

Query: 1185 DKSD 1188
             K D
Sbjct: 1170 LKLD 1173


>gi|389628778|ref|XP_003712042.1| DNA topoisomerase 2 [Magnaporthe oryzae 70-15]
 gi|351644374|gb|EHA52235.1| DNA topoisomerase 2 [Magnaporthe oryzae 70-15]
          Length = 1686

 Score = 1097 bits (2836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 585/1214 (48%), Positives = 785/1214 (64%), Gaps = 72/1214 (5%)

Query: 12   SNNANVVGPTAPN--KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI 69
            S N + V  T P   KT  E YQK +QLEHI+ RPDTYIGS+E+    +W + +++  + 
Sbjct: 111  SLNLDDVADTKPQTKKTATETYQKLTQLEHIIKRPDTYIGSVERTETKMWTFNKQTGLVE 170

Query: 70   HRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQ 129
            +R +++VPGLYKIFDEILVNAADN QRD  M  +KV +D+E   ISV N+G G+PVE+H+
Sbjct: 171  NRIVAFVPGLYKIFDEILVNAADNSQRDKTMTYLKVTVDRESGQISVENNGKGIPVEMHE 230

Query: 130  EEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYK 189
            +E VY+PELIFGHLLT SNYDD   KT GGRNGYGAKLTNIFSTEFI+E  D    K+YK
Sbjct: 231  KEKVYIPELIFGHLLTGSNYDDKELKTVGGRNGYGAKLTNIFSTEFILEAQDSSNGKRYK 290

Query: 190  QVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGC 248
            Q +TNNM    +  I+  K  D + +V+F PD A+F M   ++DD+  L+ +RV D+AG 
Sbjct: 291  QTWTNNMSNCGKAKITSNKTQD-FVRVTFTPDYARFGMPDGIDDDLEGLLYRRVYDMAGT 349

Query: 249  LGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE------------------RWE 290
            L  +VKV LNG ++ V +F +Y +MY KS+ +  + V E                  RW+
Sbjct: 350  LDSNVKVHLNGEQLKV-NFKKYCEMYAKSIAQERDDVPEGEDSKVAEVIFEDPKAHKRWK 408

Query: 291  ICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNH 350
            +  T+S+GQFQQVSFVN IAT +GGTHV+Y+A+Q+   ++A +NKK K  ++K HN+KN+
Sbjct: 409  VGFTVSDGQFQQVSFVNSIATTQGGTHVNYIADQITAALLADLNKKKKGHSLKQHNIKNY 468

Query: 351  LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFK 410
            +++FV  LI+NPAF SQTKE LT + S FGSKC L+E FLKKV     I E ++ +A  K
Sbjct: 469  IFIFVTCLIENPAFTSQTKEQLTTKASQFGSKCPLTEPFLKKVRQTEAI-ENIIHFAEKK 527

Query: 411  QSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD 470
              K L K+DG K   +    KL DANLAG ++  +CTL+LTEGDSA+ LA+AG +++  D
Sbjct: 528  ADKMLSKSDGNKRSRISN-EKLVDANLAGTKHGHECTLVLTEGDSARGLAVAGRAILDPD 586

Query: 471  RFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQ 530
            R GVFPLRGK+LNVR+AS +Q+L N EI NIK+ LGLK    Y + K LRYGHLMIM DQ
Sbjct: 587  RIGVFPLRGKMLNVRDASIDQILKNKEIQNIKQFLGLKHKQVYTDTKGLRYGHLMIMADQ 646

Query: 531  VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
                                        DHDGSHIKGLLINF+   +PSLL+IP F  EF
Sbjct: 647  ----------------------------DHDGSHIKGLLINFLQVQFPSLLQIPDFFQEF 678

Query: 591  ITPIVKA-----TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKE 645
            ITP+VK        K  K+ +F++MP YE WKE+       W  KY KGLG+S++++ + 
Sbjct: 679  ITPVVKVWQGSNPKKPTKLKTFFNMPQYEEWKEAHKHEIRRWDYKYLKGLGSSSNEDAQV 738

Query: 646  YFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDF 705
            YF ++ LH K F      + E  ELAFSKKK +ARK+WL  F PG  LD   K I YSDF
Sbjct: 739  YFTDLDLHLKQFHTMKPDEIELFELAFSKKKADARKEWLGNFIPGTFLDHSTKQITYSDF 798

Query: 706  VNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYH 765
            VNKELILFSMAD  RSIPSM+DGLKPGQRK++F  FK+N +K+ KV + +GYVSE +AYH
Sbjct: 799  VNKELILFSMADNMRSIPSMIDGLKPGQRKVIFACFKQNLVKDKKVVELAGYVSEKAAYH 858

Query: 766  HGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLF 825
            HGE SL  TI+G+AQ++VGSNN+N L+P+G FG+R QGG DAASARYI TRLSP  R +F
Sbjct: 859  HGEASLQQTIIGLAQNYVGSNNVNCLEPSGNFGSRLQGGSDAASARYIHTRLSPFARRVF 918

Query: 826  PKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRR 885
               D+ +L +  +DG+ IEP  Y P+IP VLVNG++GIGTGWS+ IPNY+P +IV N++R
Sbjct: 919  NPLDEPVLQHQVDDGKAIEPKVYAPVIPMVLVNGADGIGTGWSTSIPNYHPEEIVRNIKR 978

Query: 886  LLNG------EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPI 939
             +        +  EPM PW+RG+ GT E   +      +     +++ N   + I ELPI
Sbjct: 979  RMGRLDVPEEQEFEPMTPWWRGWKGTPEPEDASRIRFKFNGIANLDDKNPNEVVITELPI 1038

Query: 940  RRWTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESM--MRTKQEGLLKK 995
            R WT D++  LE II  ++  S+I+ +++++D   V F + L E+ M   R     LL++
Sbjct: 1039 RMWTDDFKARLEEIIRAEKTPSWIKDYKEFNDHKNVHFIIQLDEKHMKEFRDSPNLLLER 1098

Query: 996  FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKL 1055
            FKL   ++ +N+  FD+ G I+KYD  E ILEEF+H RL  Y  RK   L   + +  KL
Sbjct: 1099 FKLQKNVAITNLVAFDTNGQIRKYDKVEDILEEFYHYRLNVYAARKAHWLRVFDADYRKL 1158

Query: 1056 ENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEE 1115
             N+ RFI  +++G++VV+ +K++ L+ ELRQ+ + PFPK     +A       E EE +E
Sbjct: 1159 TNQYRFISEIIDGKLVVSKKKKSVLVQELRQRKYEPFPKGETGKKAQDEEEEFEDEEEDE 1218

Query: 1116 NPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
              E   G    DYDYLLSMAI +LT E+++ L    +    E D+L   + + LW KDLD
Sbjct: 1219 VAEGTAG----DYDYLLSMAIWSLTHERLERLKKQLEAKKAEFDELNSKSEKDLWCKDLD 1274

Query: 1176 ALDMQLDELDKSDA 1189
               M+ +   K DA
Sbjct: 1275 DFVMEWENQLKLDA 1288


>gi|83367166|gb|ABC17642.1| putative DNA topoisomerase IIbeta [Trypanosoma brucei]
 gi|261335184|emb|CBH18178.1| DNA topoisomerase II, putative [Trypanosoma brucei gambiense DAL972]
          Length = 1465

 Score = 1096 bits (2835), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 570/1217 (46%), Positives = 795/1217 (65%), Gaps = 93/1217 (7%)

Query: 19   GP--TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYV 76
            GP  T   +T+EE+YQKK+Q EHIL RPD YIG+IE  T+ +W+Y+E    M  R  ++ 
Sbjct: 37   GPESTMSGRTVEEIYQKKTQHEHILARPDMYIGTIEPVTEDVWVYDEADNVMKLRKCTWT 96

Query: 77   PGLYKIFDEILVNAADNKQRDPK-MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYV 135
            PGLYKIFDEILVNAADNK RDP     +KV +D    L+ V+N+G+G+PV+ H+E  ++V
Sbjct: 97   PGLYKIFDEILVNAADNKVRDPHGQTTIKVWVDAARGLVRVYNNGEGIPVQRHREHDLWV 156

Query: 136  PELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNN 195
            PE+IFGHLLTSSNYDD   K TGGRNG+GAKLTN+FST F +ET   +  KK+   + NN
Sbjct: 157  PEMIFGHLLTSSNYDDTEAKVTGGRNGFGAKLTNVFSTRFEVETVHSRSRKKFFMRWRNN 216

Query: 196  MGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKV 255
            M +  E  I+ C +G ++T V+F PD  KFN+    +D+V +M++RV D+AGC  KS+  
Sbjct: 217  MLENEEAVITPC-DGPDYTVVTFYPDFEKFNLEGFTEDMVLIMQRRVYDIAGCTDKSLCC 275

Query: 256  ELNGHRVPVKSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
             LN  R+  +SF EYVD+YP    +     + RVN+RWE+CV +S   FQQVSFVN IAT
Sbjct: 276  YLNDTRIACRSFPEYVDLYPTMGEERKPSSYSRVNDRWEVCVRVSNVGFQQVSFVNSIAT 335

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
             +GGTHV Y+ +Q+   V     +K+K   VK H ++ HL++FVN+LI+NP+FDSQTKET
Sbjct: 336  TRGGTHVKYIVDQIIAKVTDQAMRKSK-TEVKPHMIRPHLFIFVNSLIENPSFDSQTKET 394

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK-KNDGTKTEDVRGIS 430
            L   ++ FGS C+L    +  V  KS IVE  +  AN + ++++  K   T  + + GI 
Sbjct: 395  LNTPKARFGSTCDLPASLIDCVL-KSSIVERAVEMANSRLNREMAMKMRNTNRKQILGIP 453

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KL+DAN AGG+ S++CTLILTEGDSAKAL  AGL V  RD FGVFPL GK LNVR+ S  
Sbjct: 454  KLDDANEAGGKYSQRCTLILTEGDSAKALCTAGLGVKNRDYFGVFPLAGKPLNVRDVSLK 513

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            +   NSEI +I KI+GL    +Y + + LRYGHLMIM+DQ                    
Sbjct: 514  KASENSEIISICKIMGLDFNQKYTSTEGLRYGHLMIMSDQ-------------------- 553

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT-----NKNGKVL 605
                    DHDGSHIKGL+IN IH++WP LLK+P FL +FITPIVKA      N +   +
Sbjct: 554  --------DHDGSHIKGLIINMIHNYWPDLLKVPGFLQQFITPIVKARKKGRGNSDEGTI 605

Query: 606  SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG 665
            SF+SMPDY  WK ++G   S + +KYYKGLGTS++KEG+EYF+NI  H+ +FV+ED +D 
Sbjct: 606  SFFSMPDYFKWKNAVGEGISDYEVKYYKGLGTSSAKEGREYFENIDRHRLNFVYEDRKDD 665

Query: 666  EAIELAFSKKKIEARKKWLLQ-------FEPGNHLDQKEKYIKYSDFVNKELILFSMADL 718
            ++I LAF+K K++ RK+W+++       FE    L    + + YS+FV+KELILFS+AD 
Sbjct: 666  DSIVLAFAKDKVDERKRWVMESMSSARRFES---LSYNARDVSYSEFVHKELILFSVADC 722

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
            +RSIPS+VDGLKPGQRKI+F +FKRN ++  KVA+F+GYVSEH+AYHHGEQSL  TI+G+
Sbjct: 723  ERSIPSVVDGLKPGQRKIMFSAFKRNLVRSLKVARFAGYVSEHAAYHHGEQSLVQTIVGL 782

Query: 779  AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
            AQD+VG+NN+ LL  +GQFGTR QGGKD A+ RYI TRL+ I R ++   DD +++Y ++
Sbjct: 783  AQDYVGANNVPLLYRDGQFGTRLQGGKDHAAGRYISTRLTDIARRIYHPSDDFIVEYRDD 842

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPW 898
            DG  +EP +Y+P+IP VLVNG+ GIGTG+++ IPNY+P D++ N+ RLL+GE ++PM PW
Sbjct: 843  DGLSVEPFYYVPVIPMVLVNGTAGIGTGFATNIPNYSPLDVIDNLNRLLSGEELQPMKPW 902

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND 958
            Y GF GTIE+   +E G  +  +G      +  + I ELPI  WTQ Y++FLE + ++  
Sbjct: 903  YFGFTGTIEE---REKG-KFVSSGCATVRPDGVVHITELPIGTWTQQYKKFLEDLRERE- 957

Query: 959  SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLK-KFKLTTTISTSNMHLFDSKGVIK 1017
              +  +R+++ D TVDFEVF+  E + +   +G ++ + +L   I  +N+  FD +G I 
Sbjct: 958  -IVIQYREHNTDVTVDFEVFIHPEVLRQWVAQGCVEERLQLREYIHATNIIAFDREGKIT 1016

Query: 1018 KYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
            KY   E +L+EF+ +RLE+Y +R++  LE L+   LKLEN VRF+  V++G  +V  R  
Sbjct: 1017 KYLDAESVLKEFYLVRLEYYARRREFLLEQLQRAALKLENMVRFVNEVIDGTFIVTRRSM 1076

Query: 1078 TDLLLELRQKGFTPFPKNSK-------------------------SIEAV-----VAGAT 1107
             D+L +L+Q+G+TPFP   K                           E+V     V G  
Sbjct: 1077 KDVLKDLKQRGYTPFPPQQKKKMSSTTIVDEEDNDGARKILPDVFEFESVPLCEQVIGKM 1136

Query: 1108 DETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPE 1167
              T E EE   +  GV  ++YDYLLS+ +  LT+E        R+++  + + +  A+ +
Sbjct: 1137 LCTAEPEE-INMWKGVL-VEYDYLLSLRMVDLTVEMAMYFRTKREQMLNKHNFVLSASSK 1194

Query: 1168 SLWVKDLDALDMQLDEL 1184
             LW +DLD L   +++L
Sbjct: 1195 DLWREDLDLLRSDVEKL 1211


>gi|164425154|ref|XP_962372.2| DNA topoisomerase 2 [Neurospora crassa OR74A]
 gi|157070812|gb|EAA33136.2| DNA topoisomerase 2 [Neurospora crassa OR74A]
          Length = 1909

 Score = 1095 bits (2831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/1190 (48%), Positives = 783/1190 (65%), Gaps = 69/1190 (5%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T   KT  EMYQK +QLEHIL RPDTYIGS+E+  Q +W++ + +  M +R IS+VPGLY
Sbjct: 121  TGAAKTATEMYQKLTQLEHILKRPDTYIGSVERSEQKMWVFNKATGLMENRQISFVPGLY 180

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADN QRD  M  +KV I++E   ISV N+G G+PVEIH  E  YVPELIF
Sbjct: 181  KIFDEILVNAADNSQRDSSMTFLKVTINRESGEISVENNGKGIPVEIHGTEKCYVPELIF 240

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            GHLL  SN+DDN KKT GGRNGYGAKLTNIFS EF +E  D    K+YKQ +T+NM K S
Sbjct: 241  GHLLAGSNFDDNEKKTVGGRNGYGAKLTNIFSREFTLECQDSVNGKRYKQTWTDNMSKMS 300

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
             P I+  K  D + +++F+PD +KF M   ++DD+ AL+ +RV D+AG L       L  
Sbjct: 301  PPKITSNKAAD-FVRITFRPDFSKFGMADGIDDDLEALLYRRVYDMAGTLNFKTYCGLYA 359

Query: 260  HRVPVK--SFAEYVDMYPKSVTRFHERVNER-WEICVTLSEGQFQQVSFVNGIATIKGGT 316
              +  +    A+  D+ P +V    +R   + WE+  T+S+G FQQVSFVN IAT  GG+
Sbjct: 360  KAIAKERDEVADGEDVTPATVIFEQQRSEGKLWEVGFTVSDGSFQQVSFVNNIATTSGGS 419

Query: 317  HVDYVANQVANHVMAVVNKKNKNANVK-AHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HV+Y+A+Q+   +M  + KK    +     NVKN  ++F+N LIDNPAF SQTKE LT +
Sbjct: 420  HVNYIADQIIEVLMKELQKKKGKGHGLKTANVKNQFFIFINCLIDNPAFSSQTKEQLTTK 479

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDA 435
             + FGSKC+L + FLKKV  +S  ++ LLS+A+ K+ KDL KNDG+K + +    KL +A
Sbjct: 480  PAKFGSKCQLGDLFLKKVR-QSEAIDNLLSFADKKRDKDLAKNDGSKRKRISN-DKLIEA 537

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGR S++CTLILTEGDSA+ LA+AG +++  +R GVFPLRGK+LNVR+AS++Q+L N
Sbjct: 538  NYAGGRYSQECTLILTEGDSARGLAVAGRAILDPNRIGVFPLRGKMLNVRDASADQILKN 597

Query: 496  SEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFM 555
             E+ NIKK LGLK G  Y + K LRYGHLMIM DQ                         
Sbjct: 598  KEVENIKKFLGLKHGKVYTDTKDLRYGHLMIMADQ------------------------- 632

Query: 556  LAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA-----TNKNGKVLSFYSM 610
               D DGSHIKGLLINF    +PSLL+IP+F  EFITP+VK        K  ++  F+++
Sbjct: 633  ---DLDGSHIKGLLINFFECQFPSLLRIPNFFQEFITPVVKVWQGPNPKKPQRLQGFFTL 689

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P YE WKE+       W  KY KGLG+ST+ + + YF N+  H K+F     ++ E  EL
Sbjct: 690  PQYEEWKEAHRNELRRWKYKYLKGLGSSTTDDAQLYFTNLNKHLKEFDVMTREESEMFEL 749

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AFSKKK +ARK+WL + EPG +LD   + I Y+DFVN+ELILFSMAD  RSIPSMVDGLK
Sbjct: 750  AFSKKKADARKEWLAKCEPGTYLDHSTEKISYTDFVNRELILFSMADNIRSIPSMVDGLK 809

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+LF  FK+N I + KV + +GYVS+ +AYHHGEQSL  TI+G+AQ+FVGSNNIN 
Sbjct: 810  PGQRKVLFGCFKQNLIHDQKVVELAGYVSKEAAYHHGEQSLQQTIIGLAQNFVGSNNINC 869

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+P+G FG+R  GG DAASARYI TRLSP+ R +F   D+  L++  +DG+ IEP  Y P
Sbjct: 870  LEPSGNFGSRLSGGSDAASARYIHTRLSPLARKIFHPLDEPNLEFQFDDGKLIEPKVYAP 929

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL------NGE--MMEPMHPWYRGF 902
            IIP VLVNG++GIGTGWS+ IPNY+P DIV N++R +      +GE    EPM PW+RG+
Sbjct: 930  IIPMVLVNGADGIGTGWSTSIPNYHPLDIVENLKRRMGRDSSGDGEEKPFEPMTPWFRGW 989

Query: 903  GGTIEKTASKEAGVTYTVTGIIE--EVNETTLRIKELPIRRWTQDYREFLESII--DQND 958
             GT E          +   GI+E    N   + + ELPIR WT D++  LE II  D++ 
Sbjct: 990  KGTPEPDGPNR----FKFNGIVEVNPQNPNEVDVTELPIRMWTDDFKSKLEEIIRGDKSP 1045

Query: 959  SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKK 1018
            S+I+ +++Y+D  TV F + L E+ M    ++GL++KFKLT T++T+N+  FD++G I K
Sbjct: 1046 SWIKDYKEYNDHQTVHFIIALEEKHMSSALRDGLIEKFKLTKTVATTNLVAFDTRGKIHK 1105

Query: 1019 YDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRT 1078
            Y+ P++I+EE++H RL  Y +RKK  L+    +  KL+N+ RFI  ++  ++VV+ +K++
Sbjct: 1106 YENPQEIMEEYYHYRLNLYGERKKHWLKVYHADYRKLQNQYRFISEIIENKLVVSKKKKS 1165

Query: 1079 DLLLELRQKGFTPFP-----KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLS 1133
             L+ ELR++ +  FP     +N KS +  +  A +E EE     + V G +  DYDYLLS
Sbjct: 1166 VLVQELRERKYEAFPPKSDGRNVKSPDEELGAADNEDEE-----DAVGGAR--DYDYLLS 1218

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
            M I +LT E++  L         E D+L   + + LW +DLDA   + +E
Sbjct: 1219 MPIWSLTFERLDKLKQQIAAKKAEHDELDALSEKDLWCRDLDAFTAEWEE 1268


>gi|449706302|gb|EMD46177.1| DNA topoisomerase II, putative [Entamoeba histolytica KU27]
          Length = 1422

 Score = 1094 bits (2830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 571/1160 (49%), Positives = 766/1160 (66%), Gaps = 58/1160 (5%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT-----MIHRTISYVPGLYK 81
            +E++Y K S  E IL RPDTYIGS+E++ + +WIYEE S+      MI + IS  PGL+K
Sbjct: 8    LEDIYVKLSHKEQILTRPDTYIGSVERNDEQVWIYEEPSEQYSEGRMIQKVISLAPGLFK 67

Query: 82   IFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            I+DEILVNA+DN QRDPKM  +KV I  E + I+V+N+G G+P+EIH++E +Y+PELIFG
Sbjct: 68   IYDEILVNASDNFQRDPKMTTIKVTI--EGNSITVYNNGKGIPIEIHKKEHIYIPELIFG 125

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            HLLTSSNY D+ KK TGGRNGYGAKL NIFST+F IET DGK++  YKQ + NNM  K E
Sbjct: 126  HLLTSSNYKDDDKKVTGGRNGYGAKLANIFSTKFSIETCDGKKI--YKQTWKNNMSDKEE 183

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            P I   K+ + +TKV+F PD  +F M  +EDD   L+ +R  D+AGC     ++ +NG +
Sbjct: 184  PEIESVKKVEEYTKVTFTPDYKRFQMKGMEDDARMLLIRRAYDIAGC-NPGKRIWINGKK 242

Query: 262  VPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
            V  K+FAEY  MY        E+  ERW+ICV  S+G+  Q+SFVN I T  GGTHVDYV
Sbjct: 243  VCFKNFAEYARMYVGDEPIVSEKAGERWDICVCASKGEPMQISFVNSINTSHGGTHVDYV 302

Query: 322  ANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFG 380
               +  ++   + K NK  A +K   +KNHL+VFVN+LI+NPAFDSQTKETL  + + FG
Sbjct: 303  TGLMTKYLAEKMKKLNKKGAEIKPFQIKNHLFVFVNSLIENPAFDSQTKETLKTQVNKFG 362

Query: 381  SKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGG 440
            SK  LS++F K++  K  +V+ +L+WA  K   DL K+ G KT  + GI KL+DAN AG 
Sbjct: 363  SKPSLSDKFFKEL-GKLSVVDDILAWAIKKGEMDLNKSGGKKTARITGIPKLDDANKAGT 421

Query: 441  RNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGN 500
            +    CTLILTEGDSAK LA++GLSVVGRD +GVFPLRGK LN RE + ++V  N E  N
Sbjct: 422  KEGNLCTLILTEGDSAKTLAVSGLSVVGRDYYGVFPLRGKPLNAREIAPSKVKENHEFEN 481

Query: 501  IKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDH 560
            I KI+GL+ G  Y ++  LRYG +MIM DQ                            D 
Sbjct: 482  IAKIMGLRYGKVYTSIDELRYGSVMIMADQ----------------------------DF 513

Query: 561  DGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV-LSFYSMPDYEAWKES 619
            DGSHIKGLLIN+ H+FWPSLLKI +FLVEFITPIVK   K GK  +SF+++P +  WK++
Sbjct: 514  DGSHIKGLLINYFHTFWPSLLKIDNFLVEFITPIVKV--KRGKQEISFFTLPQFNEWKDA 571

Query: 620  L--GGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
                G    W IKYYKGLGTS   + K YF ++  HK  F ++     E I+LAF++K+ 
Sbjct: 572  RIQEGQLKKWEIKYYKGLGTSKDSDAKAYFSDLDTHKIKFAYDGAGSDEVIDLAFNRKRA 631

Query: 678  EARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKIL 737
            + RK+WL  ++P  +LDQ    I Y DFV+KELILFS  D +RSIPS+VDGLKP QRK+L
Sbjct: 632  DDRKEWLKGYDPNTYLDQDVDSISYEDFVHKELILFSYDDCERSIPSVVDGLKPSQRKVL 691

Query: 738  FCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQF 797
            +   ++N +KE KV+Q SG VSE S+YHHGE SL +TI+ MAQ+F GSNN+N L P+GQF
Sbjct: 692  WTCLEKNIMKELKVSQLSGLVSEKSSYHHGEVSLQATIVNMAQNFCGSNNVNWLLPSGQF 751

Query: 798  GTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLV 857
            G+R  GGKD A+ARYI+TRLS I+R+L PKDDD++L+YL ++ ++IEP +Y PIIPTVLV
Sbjct: 752  GSRLGGGKDQAAARYIYTRLSSISRYLCPKDDDQILEYLIDEDRRIEPKYYFPIIPTVLV 811

Query: 858  NGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVT 917
            NG++GIGTGWS+ + NYNP D+V N RR LNGE  + M PW+RG+ G + K      G  
Sbjct: 812  NGADGIGTGWSTAVSNYNPLDLVDNCRRYLNGEEFKEMKPWFRGWTGQLRKNKD---GSG 868

Query: 918  YTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV 977
            Y   G    ++E  + I ELPI+ WT  Y++ LE  I+     ++G+ +Y    TV F +
Sbjct: 869  YDCYGKWRRLSEDKIEITELPIQIWTDSYKQHLEKCIEA--KIVKGYSEYHMVNTVHFVI 926

Query: 978  FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFY 1037
             L +        E +    KL +++ T+NMHLF+S+  I KY T   IL EF  +R++ Y
Sbjct: 927  DLVQP----MSDEDIWTNLKLVSSVKTTNMHLFNSEYKITKYHTVLDILSEFCDVRMKGY 982

Query: 1038 EKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSK 1097
            E+RKK  +E++E +L+ L NK RFI  V+ GE++VNNRK+ +L  +L + GF       K
Sbjct: 983  EERKKAIIESMERQLMILSNKARFIKMVIEGELIVNNRKKNELYKDLIKFGFDQIRDPKK 1042

Query: 1098 SIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEE 1157
            + ++   G +++ E  EE  +   G     YDYLLSM I TLT EK + L+ D D L  +
Sbjct: 1043 ANKSKPIGESEDDEIKEEEEDDEVG----GYDYLLSMKIWTLTYEKAKKLMEDCDDLKTQ 1098

Query: 1158 VDDLRKATPESLWVKDLDAL 1177
            +D ++    + +W+KDLDA 
Sbjct: 1099 IDTIKTTPVKDMWLKDLDAF 1118


>gi|452983146|gb|EME82904.1| hypothetical protein MYCFIDRAFT_164213 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 1278

 Score = 1094 bits (2829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 588/1226 (47%), Positives = 811/1226 (66%), Gaps = 79/1226 (6%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E Y+K +QLEHIL RPDTYIGS+E+ T+ +W+Y  E+++M +R +++VPGLYKIFDEILV
Sbjct: 14   EQYEKLTQLEHILKRPDTYIGSVEQTTEQMWVYNSETESMENRKVTFVPGLYKIFDEILV 73

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNKQRD  M+ ++V +D E  +ISV N+G G+P+E+H +EG+++PE+IFGHLLTSSN
Sbjct: 74   NAADNKQRDKNMNELRVWVDAEKGVISVKNNGKGIPIEMHTKEGIWIPEMIFGHLLTSSN 133

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDDN  KTTGGRNGYGAKLTNI+ST+F ++T D K  ++Y+Q +  NM    +  I K K
Sbjct: 134  YDDNEAKTTGGRNGYGAKLTNIYSTQFELDTVDSKSKQRYRQTWRKNMSVMEKAKIDKVK 193

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
              D++T+V+F+PD +KF M  ++ D  AL+K+RV D+AG   K VKV LNG R+ +  F 
Sbjct: 194  V-DDYTQVTFRPDFSKFGMEKMDADFEALVKRRVYDMAGT-AKGVKVYLNGERIKISKFK 251

Query: 269  EYVDMYPKSVTR--------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKG 314
            +Y++MY K++                  +  +ERWEI   +S+G FQQVSFVN IAT  G
Sbjct: 252  QYMEMYTKAIKTENIVNDGTAPEQVILTDNPHERWEIGFAVSDGSFQQVSFVNSIATTSG 311

Query: 315  GTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            GTHV+Y+A+Q+ + +  +VNKKNK    +K   +KNH+++FVNALI NPAF SQTKE LT
Sbjct: 312  GTHVNYIADQICDKLEEIVNKKNKGGVKLKKAQLKNHIFLFVNALIVNPAFTSQTKEQLT 371

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLE 433
             + S+FGS+ ++SE+FLK + AK+ +V  +L +A  K  K L K+DG + + +   SKL 
Sbjct: 372  TKVSAFGSRPQVSEKFLKDI-AKTEVVNNILHFAQQKADKVLAKSDGGRRQRMNH-SKLT 429

Query: 434  DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            DAN AG ++  +CTL+LTEGDSA  LA+AG +VV  D FGVFPLRGK+LNVR+AS +Q+ 
Sbjct: 430  DANKAGTKDGHRCTLVLTEGDSAALLALAGRAVVNPDLFGVFPLRGKVLNVRDASVDQIS 489

Query: 494  NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
             N EI NIKK +GL+   EY + + LRYGH+MIMTDQ                       
Sbjct: 490  KNQEIQNIKKFIGLQHKKEYTDTRGLRYGHIMIMTDQ----------------------- 526

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK----VLSFYS 609
                 DHDGSHIKGLLINF+   +PSLLKIP FL+EFITPIVK    + K       F++
Sbjct: 527  -----DHDGSHIKGLLINFLQVQFPSLLKIPGFLLEFITPIVKVWKGDPKHPKAKHDFFT 581

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MP+YEAW+E   G++  W  KYYKGLGTS +++ + YF ++  H K F    D + E +E
Sbjct: 582  MPEYEAWREQ-PGHSKGWDHKYYKGLGTSDTRDAQIYFADLDKHLKTFHAMQDHEPELLE 640

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQK-EKYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
            +AFSKKK +ARK WL  F PG +LD    + I Y DF+NKELILFSMAD QRSIPS++DG
Sbjct: 641  MAFSKKKADARKTWLQNFVPGTYLDMSGTEEITYDDFINKELILFSMADNQRSIPSVIDG 700

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKPGQRK+++  F+RN  K+ KV + +G VS  +AY +G+ SL  TI+ MAQ+FVGSNN+
Sbjct: 701  LKPGQRKVMYTCFRRNMKKDMKVVELAGLVSGLTAYPYGDASLQQTIVAMAQNFVGSNNM 760

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            N+L+P+G FG+R QGG DAASARYI+TRLSP  R +F + D+ LL Y  +DG+ IEP  Y
Sbjct: 761  NVLEPSGNFGSRLQGGSDAASARYIYTRLSPFARKIFHQSDEALLTYNLDDGKTIEPEQY 820

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVAN-VRRLLNGE--MMEPMHPWYRGFGGT 905
            +PI+P VL+NG+EGIGTGWS+ IP Y P D++ N +RR+  GE   M+PM PWYRG+ G 
Sbjct: 821  VPILPMVLINGAEGIGTGWSTSIPQYKPDDVIDNLIRRMDVGEKDAMQPMTPWYRGWTGQ 880

Query: 906  IEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRG 963
             ++         +  TG IE ++ETT+R+ ELP+  WTQ +++ LE II  ++  SFI+ 
Sbjct: 881  TDQIDD----TRFKFTGKIEVIDETTVRVTELPVHYWTQAFKDKLEDIIKAEKTPSFIKD 936

Query: 964  FRQYSDDTTVDFEVFLSEESMMRTKQEGLLKK-FKLTTTISTSNMHLFDSKGVIKKYDTP 1022
            + +Y+   TV FE+ L  +++ +   EG L++ FKL+ T  T+N+  FD +G I KY +P
Sbjct: 937  YVEYNTPETVHFEIKLEAKTLQQN--EGKLEELFKLSNTQVTTNLVAFDPQGRIYKYASP 994

Query: 1023 EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLL 1082
              I+EEF+H+RL+ Y++RK   L  +  EL KL N+ RF+  ++  E+VV+ +K+  L+ 
Sbjct: 995  LDIIEEFYHVRLQKYQQRKDWLLSEMHKELDKLNNQARFVNMIIKNELVVSKKKKAVLVK 1054

Query: 1083 ELRQKGFTPFPKNSKSIEAVVAG----ATDETEESEENPEVVNGVQSIDYDYLLSMAIGT 1138
            EL + GFT FP   K IEA   G      ++  E  ++ EV  G    D+DYLL M I +
Sbjct: 1055 ELDKLGFTRFP---KVIEAKKQGELEEVVEDDNEESDDAEVAAGAN--DFDYLLGMPIWS 1109

Query: 1139 LTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDE-LDKSDARAEEERMK 1197
            LT E+V  L         E+D L   +P+ LW +DL  L  +    LD+  AR +    K
Sbjct: 1110 LTEERVAKLNKQIGDKEVEIDILTAKSPQDLWKEDLTELRTEYQAYLDEEKARDK----K 1165

Query: 1198 IKGNGNGDAGPKIVAKRAPKNARKND 1223
            I  NG   +G   +  +A K    ND
Sbjct: 1166 INANGRRASGKLGIGGQASKKRNAND 1191


>gi|67472224|ref|XP_651972.1| DNA topoisomerase II [Entamoeba histolytica HM-1:IMSS]
 gi|40804954|gb|AAR91745.1| topoisomerase II [Entamoeba histolytica]
 gi|56468768|gb|EAL46584.1| DNA topoisomerase II, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 1349

 Score = 1093 bits (2828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 571/1160 (49%), Positives = 766/1160 (66%), Gaps = 58/1160 (5%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT-----MIHRTISYVPGLYK 81
            +E++Y K S  E IL RPDTYIGS+E++ + +WIYEE S+      MI + IS  PGL+K
Sbjct: 8    LEDIYVKLSHKEQILTRPDTYIGSVERNDEQVWIYEEPSEQYSEGRMIQKVISLAPGLFK 67

Query: 82   IFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            I+DEILVNA+DN QRDPKM  +KV I  E + I+V+N+G G+P+EIH++E +Y+PELIFG
Sbjct: 68   IYDEILVNASDNFQRDPKMTTIKVTI--EGNSITVYNNGKGIPIEIHKKEHIYIPELIFG 125

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            HLLTSSNY D+ KK TGGRNGYGAKL NIFST+F IET DGK++  YKQ + NNM  K E
Sbjct: 126  HLLTSSNYKDDDKKVTGGRNGYGAKLANIFSTKFSIETCDGKKI--YKQTWKNNMSDKEE 183

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            P I   K+ + +TKV+F PD  +F M  +EDD   L+ +R  D+AGC     ++ +NG +
Sbjct: 184  PEIESVKKVEEYTKVTFTPDYKRFQMKGMEDDARMLLIRRAYDIAGC-NPGKRIWINGKK 242

Query: 262  VPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
            V  K+FAEY  MY        E+  ERW+ICV  S+G+  Q+SFVN I T  GGTHVDYV
Sbjct: 243  VCFKNFAEYARMYVGDEPIVSEKAGERWDICVCASKGEPMQISFVNSINTSHGGTHVDYV 302

Query: 322  ANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFG 380
               +  ++   + K NK  A +K   +KNHL+VFVN+LI+NPAFDSQTKETL  + + FG
Sbjct: 303  TGLMTKYLAEKMKKLNKKGAEIKPFQIKNHLFVFVNSLIENPAFDSQTKETLKTQVNKFG 362

Query: 381  SKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGG 440
            SK  LS++F K++  K  +V+ +L+WA  K   DL K+ G KT  + GI KL+DAN AG 
Sbjct: 363  SKPSLSDKFFKEL-GKLSVVDDILAWAIKKGEMDLNKSGGKKTARITGIPKLDDANKAGT 421

Query: 441  RNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGN 500
            +    CTLILTEGDSAK LA++GLSVVGRD +GVFPLRGK LN RE + ++V  N E  N
Sbjct: 422  KEGNLCTLILTEGDSAKTLAVSGLSVVGRDYYGVFPLRGKPLNAREIAPSKVKENHEFEN 481

Query: 501  IKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDH 560
            I KI+GL+ G  Y ++  LRYG +MIM DQ                            D 
Sbjct: 482  IAKIMGLRYGKVYTSIDELRYGSVMIMADQ----------------------------DF 513

Query: 561  DGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV-LSFYSMPDYEAWKES 619
            DGSHIKGLLIN+ H+FWPSLLKI +FLVEFITPIVK   K GK  +SF+++P +  WK++
Sbjct: 514  DGSHIKGLLINYFHTFWPSLLKIDNFLVEFITPIVKV--KRGKQEISFFTLPQFNEWKDA 571

Query: 620  L--GGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
                G    W IKYYKGLGTS   + K YF ++  HK  F ++     E I+LAF++K+ 
Sbjct: 572  RIQEGQLKKWEIKYYKGLGTSKDSDAKAYFSDLDTHKIKFAYDGAGSDEVIDLAFNRKRA 631

Query: 678  EARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKIL 737
            + RK+WL  ++P  +LDQ    I Y DFV+KELILFS  D +RSIPS+VDGLKP QRK+L
Sbjct: 632  DDRKEWLKGYDPNTYLDQDVDSISYEDFVHKELILFSYDDCERSIPSVVDGLKPSQRKVL 691

Query: 738  FCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQF 797
            +   ++N +KE KV+Q SG VSE S+YHHGE SL +TI+ MAQ+F GSNN+N L P+GQF
Sbjct: 692  WTCLEKNIMKELKVSQLSGLVSEKSSYHHGEVSLQATIVNMAQNFCGSNNVNWLLPSGQF 751

Query: 798  GTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLV 857
            G+R  GGKD A+ARYI+TRLS I+R+L PKDDD++L+YL ++ ++IEP +Y PIIPTVLV
Sbjct: 752  GSRLGGGKDQAAARYIYTRLSSISRYLCPKDDDQILEYLIDEDRRIEPKYYFPIIPTVLV 811

Query: 858  NGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVT 917
            NG++GIGTGWS+ + NYNP D+V N RR LNGE  + M PW+RG+ G + K      G  
Sbjct: 812  NGADGIGTGWSTAVSNYNPLDLVDNCRRYLNGEEFKEMKPWFRGWTGQLRKNKD---GSG 868

Query: 918  YTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV 977
            Y   G    ++E  + I ELPI+ WT  Y++ LE  I+     ++G+ +Y    TV F +
Sbjct: 869  YDCYGKWRRLSEDKIEITELPIQIWTDSYKQHLEKCIEAK--IVKGYSEYHMVNTVHFVI 926

Query: 978  FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFY 1037
             L +        E +    KL +++ T+NMHLF+S+  I KY T   IL EF  +R++ Y
Sbjct: 927  DLVQP----MSDEDIWTNLKLVSSVKTTNMHLFNSEYKITKYHTVLDILSEFCDVRMKGY 982

Query: 1038 EKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSK 1097
            E+RKK  +E++E +L+ L NK RFI  V+ GE++VNNRK+ +L  +L + GF       K
Sbjct: 983  EERKKAIIESMERQLMILSNKARFIKMVIEGELIVNNRKKNELYKDLIKFGFDQIRDPKK 1042

Query: 1098 SIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEE 1157
            + ++   G +++ E  EE  +   G     YDYLLSM I TLT EK + L+ D D L  +
Sbjct: 1043 ANKSKPIGESEDDEIKEEEEDDEVG----GYDYLLSMKIWTLTYEKAKKLMEDCDDLKTQ 1098

Query: 1158 VDDLRKATPESLWVKDLDAL 1177
            +D ++    + +W+KDLDA 
Sbjct: 1099 IDTIKTTPVKDMWLKDLDAF 1118


>gi|322707413|gb|EFY98991.1| DNA topoisomerase 2 [Metarhizium anisopliae ARSEF 23]
          Length = 1647

 Score = 1093 bits (2827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 617/1389 (44%), Positives = 861/1389 (61%), Gaps = 113/1389 (8%)

Query: 7    LPLTTSNNANV---VGPTAP----NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALW 59
            +PL    N +V   V PT P    +KT  EMYQK +QLEHI+ RPDTYIGS+EK  Q +W
Sbjct: 96   VPLAEVENDSVLIDVPPTKPTSKSSKTATEMYQKLTQLEHIIKRPDTYIGSVEKTDQQMW 155

Query: 60   IYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPK-MDAVKVVIDQEHDLISVHN 118
            +Y +E+  M+++ IS+VPG YKIFDEI+VNAADN QR+   M  +KV I++    I+V N
Sbjct: 156  VYNKETSQMVYKNISFVPGFYKIFDEIMVNAADNSQREGSGMTYMKVNINRATGEINVEN 215

Query: 119  SGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
            +G G+P+ IH++E +Y+PE+IFGHLL  SN+DDN KKT GGRNGYGAKL N+FS EF +E
Sbjct: 216  NGKGIPIVIHEKEKIYIPEMIFGHLLAGSNFDDNEKKTVGGRNGYGAKLCNVFSQEFTVE 275

Query: 179  TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVAL 237
              D    K+YKQ +T+NM K  +  I+  K  D + +++FKPD  +F M   ++DD+ AL
Sbjct: 276  CQDSGNGKRYKQTWTDNMQKMQKAKITSNKSAD-FVRITFKPDYDRFGMPEGIDDDLEAL 334

Query: 238  MKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE---------- 287
            + +RV D+AG +   VKV LNG ++ +K F  Y D+Y KS+    ER  E          
Sbjct: 335  LYRRVYDMAGTV-HGVKVYLNGEQIKLKDFKAYCDLYAKSIAA--ERTAEEGGTPTCTVD 391

Query: 288  --------RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN 339
                    RWE+  T+S+G FQQVSFVN IAT  GGTHV+Y+A+Q+   ++  ++KK K 
Sbjct: 392  IDKDKSHPRWEVAFTVSDGTFQQVSFVNSIATTTGGTHVNYIADQITGSLLKALDKKKKG 451

Query: 340  ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGI 399
             ++K  +++NH+++F+N  I+NPAF+SQTKE +T + S FGSKC L + FLK + AKS  
Sbjct: 452  HSLKQSHLRNHIFIFINCFIENPAFNSQTKEQMTTKVSQFGSKCVLGDNFLKAI-AKSDA 510

Query: 400  VETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKAL 459
            +E ++ +A  K  K L K+DG+K   V   +KL +ANLAG R   +CTLILTEGDSAK L
Sbjct: 511  IENIMDFAQKKADKMLSKSDGSKRARVSN-AKLVEANLAGTRRGHECTLILTEGDSAKGL 569

Query: 460  AMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSL 519
            A++G +++  D+ GVFPLRGKLLNVR+AS +Q+  N EI NIK+ LGLK    Y + KSL
Sbjct: 570  AVSGRAILDPDKIGVFPLRGKLLNVRDASLDQITKNQEIQNIKQFLGLKHKQVYTDTKSL 629

Query: 520  RYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPS 579
            RYGHLMIMTDQ                            DHDGSHIKGLLINF+   +PS
Sbjct: 630  RYGHLMIMTDQ----------------------------DHDGSHIKGLLINFLQVQFPS 661

Query: 580  LLKIPSFLVEFITPIVKA-----TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKG 634
            LLKIP FL EFITPIVK        K  ++ SF++ P Y+ WKES     S W  KY+KG
Sbjct: 662  LLKIPQFLQEFITPIVKVWQGPDPKKPQRLKSFFTQPQYDEWKESHKAELSRWQSKYFKG 721

Query: 635  LGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLD 694
            LGTS++++ + YF N+  H K+F     ++ E  +L FSKKK +ARK+WL  F PG  LD
Sbjct: 722  LGTSSNEDAQVYFTNLDNHLKEFEVMKSEEAELFDLVFSKKKADARKEWLGNFIPGTFLD 781

Query: 695  QKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQF 754
               K I Y+DFV+KELILFSMAD  RSIPS++DGLKPGQRK+L+  FKRN IK+ KV + 
Sbjct: 782  HSTKEITYTDFVSKELILFSMADNLRSIPSVIDGLKPGQRKVLYACFKRNLIKDKKVVEL 841

Query: 755  SGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIF 814
            +GYVSEH+AYHHGE SL  TI+G+AQ+FVGSNNIN+L+P+G FG+R  GG DAAS RY F
Sbjct: 842  AGYVSEHTAYHHGEASLQQTIIGLAQNFVGSNNINILEPSGNFGSRLAGGSDAASPRYTF 901

Query: 815  TRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNY 874
            TRL+P  + +F   D+  L +  EDG++IEP  Y PI+P VLVNG++GIGTGWS+ IPNY
Sbjct: 902  TRLAPFAKKIFSPLDEACLKHQYEDGKRIEPEVYSPILPMVLVNGADGIGTGWSTTIPNY 961

Query: 875  NPRDIVANVRRLLNGEM---------MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIE 925
            +P DIV N++R + G +          E M PW+RG+ G+ E          Y   GI  
Sbjct: 962  HPADIVKNLKRRM-GRLDEDGAEEKPFETMTPWFRGWKGSPEAAGPDR----YKFNGIAS 1016

Query: 926  E--VNETTLRIKELPIRRWTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSE 981
            +   N   + I ELPIR WT D++  LE +I  ND  ++I+ +++++D  TV FE+ + E
Sbjct: 1017 QNDQNPNEIIITELPIRMWTDDFKAKLEKVISGNDGPTWIKDYKEFNDHKTVHFEIMVDE 1076

Query: 982  ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
            + + +  +EGLL++FKLT  ++TSN+  FD++G I+KY+  E ILEE++  RL+ Y  RK
Sbjct: 1077 KHLPKILEEGLLERFKLTKQVATSNLVAFDTRGQIRKYEKVEDILEEYYVHRLQMYHDRK 1136

Query: 1042 KVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA 1101
            +  L+  + +L KL+N+ RFI  +++GE++V  +K+  L+ ELR + +  FP   +  + 
Sbjct: 1137 QYWLQVYDNDLEKLKNQYRFIKEIIDGELIVGRKKKAVLVSELRDRKYKAFPPGGQKQKT 1196

Query: 1102 VVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
                  +   E++++ +      + DYDYLLSM I +LT E++  L   +D +N++ DD+
Sbjct: 1197 ADDEPDESDNENDDDDDKATAAGAHDYDYLLSMPIWSLTQERLDKL---KDAINKKKDDI 1253

Query: 1162 RKATPES---LWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKN 1218
               + +S   LW  DLD     + E D   A  +E + KI+  G  ++  KI A R  K 
Sbjct: 1254 EGLSAKSEKDLWCADLDDF---MTEWDAQVALEQELQTKIRRMGRRES-KKIGAGRNRKG 1309

Query: 1219 ARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKAP--AEKLDDDEEDEVPDLKQR- 1275
               +D K       +           VK + ++  + A   + K   + +D+V DL    
Sbjct: 1310 KDDDDYKPEKKSKGKGKAAAAKAAPKVKTETKSAQRFADMFSTKTKKEPKDDVVDLSDNF 1369

Query: 1276 ----LAKLNEQLAS----TKLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVE- 1326
                 A L+    S    T+L  S  QS   + E+  VP     P+KR AA K     E 
Sbjct: 1370 SDDDFAALSRNKPSSARVTELSQSASQS---QAEEPDVP----RPTKRAAASKAKTLFEV 1422

Query: 1327 TSDSEDEII 1335
            +SDSE E +
Sbjct: 1423 SSDSEVEDV 1431


>gi|440294606|gb|ELP87606.1| DNA topoisomerase, putative [Entamoeba invadens IP1]
          Length = 1306

 Score = 1093 bits (2827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1188 (48%), Positives = 788/1188 (66%), Gaps = 61/1188 (5%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYE--EESKTMIHRTISYVPGLYKIFD 84
            +E++Y K S  E IL RPDTYIGS+EK+ +++W++   E+   M+ + ISY PGL+KIFD
Sbjct: 8    LEDVYVKLSHKEQILTRPDTYIGSVEKNDESVWVFSDGEDGGEMVKKPISYTPGLFKIFD 67

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNA+DN QRD  MD +KV I    D+ISV+N+G G+P+EIH++E +Y+PELIFGHLL
Sbjct: 68   EILVNASDNFQRDTNMDTIKVNI--VGDVISVYNNGKGIPIEIHKKEKMYIPELIFGHLL 125

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNY D+ KK TGGRNGYGAKL NIFS  F IET+DG ++  YKQ +T NM  K E  I
Sbjct: 126  TSSNYRDDDKKVTGGRNGYGAKLANIFSNSFEIETSDGTKV--YKQRWTKNMDNKEEAII 183

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            ++ K  + +TKV+F PD A+F M  +E+D  AL+ +R  D+AGC     KV +N  +V  
Sbjct: 184  TE-KHCEEYTKVTFTPDYARFQMKGMEEDTKALLIRRAYDIAGC-NPGKKVYINKVKVCF 241

Query: 265  KSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQ 324
            K F +Y  MY    +   E+  +RWE+CV  S+G+ QQVSFVN I T KGGTHVD V NQ
Sbjct: 242  KRFEDYAKMYVGKESIVSEQAGDRWEVCVCASQGEAQQVSFVNSIFTSKGGTHVDIVLNQ 301

Query: 325  VANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
            +  ++M  + KKNK  A +K   VKNHL+VFV  LI+NPAFDSQTKETL  + S FGSK 
Sbjct: 302  ICKNLMDKLAKKNKKGAEIKPFQVKNHLFVFVRCLIENPAFDSQTKETLKTQSSKFGSKP 361

Query: 384  ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
             LS++F  K+ +K  +++ +L+WA  K  +DL K+ G KT  + GI KL+DAN AG ++ 
Sbjct: 362  VLSDKFFTKL-SKLSVMDDILNWAIKKGEQDLSKSGGRKTARITGIPKLDDANKAGTKDG 420

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSAK LA++GLSVVGRD +GVFPLRGK LN RE SS +V NN E  NI K
Sbjct: 421  KLCTLILTEGDSAKTLAVSGLSVVGRDYYGVFPLRGKPLNAREISSAKVKNNQEFENIAK 480

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            I+GL+ G +Y ++  LRYG +MIM DQ                            D+DGS
Sbjct: 481  IMGLRYGKKYTDLNELRYGCVMIMADQ----------------------------DYDGS 512

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKES--LG 621
            HIKGLLIN+ + FWPSLLKI +FLVEFITPIVK   K  + +SF+++P +  WKE     
Sbjct: 513  HIKGLLINYFNVFWPSLLKIKNFLVEFITPIVKV-KKGKEEISFFTVPQFNEWKEEKIHE 571

Query: 622  GNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARK 681
            G    W IKYYKGLGTS   + K YF ++  HK  F +  +   + I+LAFSKK+ + RK
Sbjct: 572  GELKKWEIKYYKGLGTSKDSDAKVYFGDLDTHKIRFDYNGEPSDQVIDLAFSKKRADDRK 631

Query: 682  KWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 741
            +WL  ++P  +LDQ  + + Y DFV+KELILFS  D +RSIP +VDGLKP QRK+L+   
Sbjct: 632  EWLKGYDPNTYLDQDVESVSYQDFVHKELILFSYDDCERSIPCVVDGLKPSQRKVLWTCL 691

Query: 742  KRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRN 801
             +N I+E KV+Q SG VSE S+YHHGE SL STI+ MAQ+F G+NNINLL P+GQFG+R 
Sbjct: 692  IKNVIRELKVSQLSGLVSEKSSYHHGEVSLQSTIVNMAQNFCGANNINLLLPSGQFGSRL 751

Query: 802  QGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSE 861
            QGGKD A+ARYI+TRLS ITR L  K+DD++LD+L ++ ++IEP +Y+PIIP VLVNG+E
Sbjct: 752  QGGKDQAAARYIYTRLSTITRSLCIKEDDQVLDFLIDEDRKIEPKYYVPIIPMVLVNGAE 811

Query: 862  GIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVT 921
            GIGTGWS+ IPN+NP D+V N +R LNGE ++PM PWYRG+ G +++    + G  +   
Sbjct: 812  GIGTGWSTDIPNFNPLDLVDNCKRYLNGEELQPMKPWYRGWTGELKEN---KEGTGFMCY 868

Query: 922  GIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSE 981
            G    V    + I+ELP+  WT++Y+  LE +I+     ++GF+++    TV F + L+ 
Sbjct: 869  GRWRRVGNNRIEIRELPMHIWTENYKVHLEKMIEAKT--VKGFQEHHLINTVHFVIDLAV 926

Query: 982  ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
            E       E +   FKL ++I  +NMHLF+S+  I+KY TP  I+ EF  +RL+ YE RK
Sbjct: 927  E----MTDEQVWNNFKLASSIKDANMHLFNSEMKIQKYHTPLDIMREFCEVRLKTYEARK 982

Query: 1042 KVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA 1101
            K  ++++E ++L L NKVRFI  V+ G+++VNNRK+ DL  EL   GF       K  ++
Sbjct: 983  KAIIDSMEHQMLILSNKVRFIKMVIEGKLIVNNRKKNDLYKELISLGFDQIKDPKKLEKS 1042

Query: 1102 VVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
               G  +  EES    +     ++  YDYLLSM I TLT E+ + L+ D D L  ++D++
Sbjct: 1043 KPIGGVE--EESVIKVKEEEEEEAGGYDYLLSMKIWTLTYERAKKLMEDCDDLKTQIDEV 1100

Query: 1162 RKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPK 1209
            +  T + +W+K+L + + +  E      + EE  +K+     GD G K
Sbjct: 1101 KTTTVKDMWLKELASFEKKYPEW----LKEEEILLKV-----GDEGTK 1139


>gi|407035214|gb|EKE37602.1| DNA gyrase/topoisomerase IV, A subunit domain containing protein
            [Entamoeba nuttalli P19]
          Length = 1350

 Score = 1092 bits (2825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 570/1160 (49%), Positives = 766/1160 (66%), Gaps = 58/1160 (5%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKT-----MIHRTISYVPGLYK 81
            +E++Y K S  E IL RPDTYIGS+E++ + +WIYEE S+      MI + IS  PGL+K
Sbjct: 8    LEDIYVKLSHKEQILTRPDTYIGSVERNDEQVWIYEEPSEQYNEGRMIQKVISLAPGLFK 67

Query: 82   IFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            I+DEILVNA+DN QRDPKM  +KV I  E + I+V+N+G G+P+EIH++E +Y+PELIFG
Sbjct: 68   IYDEILVNASDNFQRDPKMTTIKVTI--EGNSITVYNNGKGIPIEIHKKEHIYIPELIFG 125

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            HLLTSSNY D+ KK TGGRNGYGAKL NIFST+F IET DGK++  YKQ + NNM  K E
Sbjct: 126  HLLTSSNYKDDDKKVTGGRNGYGAKLANIFSTKFSIETCDGKKI--YKQTWKNNMSDKEE 183

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            P I   K+ + +TKV+F PD  +F M  +E+D   L+ +R  D+AGC     ++ +NG +
Sbjct: 184  PEIESVKKVEEYTKVTFTPDYKRFQMKGMEEDARMLLIRRAYDIAGC-NPGKRIWINGKK 242

Query: 262  VPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
            V  K+FAEY  MY        E+  ERW+ICV  S+G+  Q+SFVN I T  GGTHVDYV
Sbjct: 243  VCFKNFAEYARMYVGDEPIVSEKAGERWDICVCASKGEPMQISFVNSINTSHGGTHVDYV 302

Query: 322  ANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFG 380
               +  ++   + K NK  A +K   +KNHL+VFVN+LI+NPAFDSQTKETL  + + FG
Sbjct: 303  TGLMTKYLAEKMKKLNKKGAEIKPFQIKNHLFVFVNSLIENPAFDSQTKETLKTQVNKFG 362

Query: 381  SKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGG 440
            SK  LS++F K++  K  +V+ +L+WA  K   DL K+ G KT  + GI KL+DAN AG 
Sbjct: 363  SKPSLSDKFFKEL-GKLSVVDDILAWAIKKGEMDLNKSGGKKTARITGIPKLDDANKAGT 421

Query: 441  RNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGN 500
            +    CTLILTEGDSAK LA++GLSVVGRD +GVFPLRGK LN RE + ++V  N E  N
Sbjct: 422  KEGNLCTLILTEGDSAKTLAVSGLSVVGRDYYGVFPLRGKPLNAREIAPSKVKENHEFEN 481

Query: 501  IKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDH 560
            I KI+GL+ G  Y ++  LRYG +MIM DQ                            D 
Sbjct: 482  IAKIMGLRYGKVYTSIDELRYGSVMIMADQ----------------------------DF 513

Query: 561  DGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV-LSFYSMPDYEAWKES 619
            DGSHIKGLLIN+ H+FWPSLLKI +FLVEFITPIVK   K GK  +SF+++P +  WK++
Sbjct: 514  DGSHIKGLLINYFHTFWPSLLKIDNFLVEFITPIVKV--KRGKQEISFFTLPQFNEWKDA 571

Query: 620  L--GGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
                G    W IKYYKGLGTS   + K YF ++  HK  F ++     E I+LAF++K+ 
Sbjct: 572  RIQEGQLKKWEIKYYKGLGTSKDSDAKAYFSDLDTHKIKFAYDGAGSDEVIDLAFNRKRA 631

Query: 678  EARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKIL 737
            + RK+WL  ++P  +LDQ    I Y DFV+KELILFS  D +RSIPS+VDGLKP QRK+L
Sbjct: 632  DDRKEWLKGYDPNTYLDQDVDSISYEDFVHKELILFSYDDCERSIPSVVDGLKPSQRKVL 691

Query: 738  FCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQF 797
            +   ++N +KE KV+Q SG VSE S+YHHGE SL +TI+ MAQ+F GSNN+N L P+GQF
Sbjct: 692  WTCLEKNIMKELKVSQLSGLVSEKSSYHHGEVSLQATIVNMAQNFCGSNNVNWLLPSGQF 751

Query: 798  GTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLV 857
            G+R  GGKD A+ARYI+TRLS I+R+L PKDDD++L+YL ++ ++IEP +Y PIIPTVLV
Sbjct: 752  GSRLGGGKDQAAARYIYTRLSSISRYLCPKDDDQILEYLIDEDRRIEPKYYFPIIPTVLV 811

Query: 858  NGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVT 917
            NG++GIGTGWS+ + NYNP D+V N RR LNGE  + M PW+RG+ G + K      G  
Sbjct: 812  NGADGIGTGWSTAVSNYNPLDLVDNCRRYLNGEEFKEMKPWFRGWTGQLRKNKD---GSG 868

Query: 918  YTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV 977
            Y   G    ++E  + I ELPI+ WT  Y++ LE  I+     ++G+ +Y    TV F +
Sbjct: 869  YDCYGKWRRLSEDKIEITELPIQIWTDSYKQHLEKCIEA--KIVKGYSEYHMVNTVHFVI 926

Query: 978  FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFY 1037
             L +        E +    KL +++ T+NMHLF+S+  I KY T   IL EF  +R++ Y
Sbjct: 927  DLVQP----MSDEDIWTNLKLVSSVKTTNMHLFNSEYKITKYHTVLDILAEFCDVRMKGY 982

Query: 1038 EKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSK 1097
            E+RKK  +E++E +L+ L NK RFI  V+ GE++VNNRK+ +L  +L + GF       K
Sbjct: 983  EERKKAIIESMERQLMILSNKARFIKMVIEGELIVNNRKKNELYKDLIKFGFDQIRDPKK 1042

Query: 1098 SIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEE 1157
            + ++   G +++ E  EE  +   G     YDYLLSM I TLT EK + L+ D D L  +
Sbjct: 1043 ANKSKPIGESEDEEIKEEEEDDEVG----GYDYLLSMKIWTLTYEKAKKLMEDCDDLKTQ 1098

Query: 1158 VDDLRKATPESLWVKDLDAL 1177
            +D ++    + +W+KDLDA 
Sbjct: 1099 IDTIKTTPVKDMWLKDLDAF 1118


>gi|401837856|gb|EJT41712.1| TOP2-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 1487

 Score = 1092 bits (2825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 583/1256 (46%), Positives = 803/1256 (63%), Gaps = 90/1256 (7%)

Query: 4    DKRLPLTTSNNA----NVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALW 59
            D +LP+ +  N      ++  + P  T  E YQK SQLEHIL RPDTY+GS+E   Q  W
Sbjct: 51   DFQLPVLSIQNHIDKNGLIMSSEPTNT-SEKYQKISQLEHILKRPDTYVGSVETQDQLQW 109

Query: 60   IYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNS 119
            IY+EE+  MI + +  VPGL+KIFDEILVNAADNK RDP M  + V I  E + I V N 
Sbjct: 110  IYDEETDCMIEKKVIIVPGLFKIFDEILVNAADNKVRDPSMKRIDVNILPEENTIEVKND 169

Query: 120  GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
            G G+PVEIH +E +Y+PE+IFGHLLTSSNYDD+ KK TGGRNGYGAKL NIFSTEFI+ET
Sbjct: 170  GKGIPVEIHNKENIYIPEMIFGHLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILET 229

Query: 180  ADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK 239
            AD    KKY Q + NNM     P I+  K+G ++TKV+FKPDL++F M  L+ D++ +M+
Sbjct: 230  ADLNVGKKYIQKWENNMSICHPPKITSYKKGPSYTKVTFKPDLSRFGMKSLDSDILGVMR 289

Query: 240  KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV-------------------TR 280
            +RV D+ G + + +   LNG  + +++F  YV +Y KS+                   T 
Sbjct: 290  RRVYDINGSV-RDINAYLNGKSLKIRNFRNYVGLYLKSLEKKRQLDNGQDVAAQPHIPTI 348

Query: 281  FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA 340
             +ER+N+RWE+   +S+  FQQ+SFVN IAT  GGTHV+YV +Q+   +  ++ KK K +
Sbjct: 349  LYERLNDRWEVAFAVSDISFQQISFVNSIATTMGGTHVNYVTDQIVKKISEILKKKKKRS 408

Query: 341  NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIV 400
             VK   +KN++++F+N L++NPAF SQTKE LT R   FGS+CE+  E++ K+  K+ + 
Sbjct: 409  -VKPFQIKNNMFIFINCLVENPAFTSQTKEQLTTRVKDFGSRCEIPIEYINKIM-KTELA 466

Query: 401  ETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALA 460
              +   A+  +   LKK+DGT+   +    KLEDAN AG ++  +CTL+LTEGDSA +LA
Sbjct: 467  TRMFEIADANEDNALKKSDGTRKSRITDYPKLEDANKAGSKDGYKCTLVLTEGDSALSLA 526

Query: 461  MAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLR 520
            +AGLSVVGRD +G +PLRGK+LNVREAS++Q+  N+EI  IKKI+GL+   +Y + KSLR
Sbjct: 527  VAGLSVVGRDYYGCYPLRGKMLNVREASADQISKNAEIQAIKKIMGLQHRKKYEDTKSLR 586

Query: 521  YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
            YGHLMIMTDQ                            DHDGSHIKGL+INF+ S +P L
Sbjct: 587  YGHLMIMTDQ----------------------------DHDGSHIKGLIINFLESSFPGL 618

Query: 581  LKIPSFLVEFITPIVKA--TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTS 638
            L I  FL++FITPI+K   T    K +SFY+MPDYE W+     +  +W  KYYKGLGTS
Sbjct: 619  LDIEGFLLDFITPIIKVSITKPTKKTISFYNMPDYEKWRNE-ESHKFTWKQKYYKGLGTS 677

Query: 639  TSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEK 698
             ++E +EYF ++  H K F      D + I+LAFSKKK + RK+WL Q+EPG  LD   K
Sbjct: 678  LAREVREYFSDLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWLRQYEPGTVLDPTLK 737

Query: 699  YIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYV 758
             I   DF+NKELILFS+AD  RSIP+++DGLKPGQRK+L+  FK+N  +E KV   + YV
Sbjct: 738  EIPIGDFINKELILFSLADNIRSIPNVLDGLKPGQRKVLYGCFKKNLKEEIKVGILASYV 797

Query: 759  SEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLS 818
               +AYHH E+SLA TI+G+AQ+FVGSNNINLL PNG FGTR  GGKDAA+ARYI+T L+
Sbjct: 798  GGCTAYHHAEESLAQTIIGLAQNFVGSNNINLLLPNGAFGTRATGGKDAAAARYIYTNLN 857

Query: 819  PITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRD 878
             +TR +F   DD+L  Y  ED   +EP WY+PI+P VLVNG+EGIGTGWS+YIP +NP +
Sbjct: 858  KLTRKIFHPSDDQLYTYAQEDETTVEPEWYLPILPMVLVNGAEGIGTGWSTYIPPFNPLE 917

Query: 879  IVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELP 938
            IV N+R L+N E  E M PW++G+ GT+E+       + Y + G IE+V   TL I ELP
Sbjct: 918  IVKNIRHLMNDEEQEQMRPWFKGWTGTVEEIER----LRYRMYGKIEQVGTNTLEITELP 973

Query: 939  IRRWTQDYREFL---ESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKK 995
             R WT   +E+L    S  D+  ++I+   +  DD  + F + LS E M +T++ G  ++
Sbjct: 974  ARTWTLTIKEYLLLGLSGSDKIKAWIKDMEEQHDD-NIKFIITLSPEEMAKTRKIGFYER 1032

Query: 996  FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKL 1055
            FKL + IS  NM  FD  G IK+Y +  +IL EFF++RLE+Y+KRK    E L+ E+ K 
Sbjct: 1033 FKLVSPISLMNMVAFDPHGKIKRYYSANEILSEFFYVRLEYYQKRKDHMSERLQWEVEKY 1092

Query: 1056 ENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGF------------TPFPKNSKSIEAVV 1103
              +V+FI  +++ E+VV N+ +  ++ EL   GF             P  + ++ ++ V 
Sbjct: 1093 SFQVKFIKMIIDKELVVTNKLKKAIIQELEDLGFPRINKEGKPYYGAPKTEMTEQVDDVN 1152

Query: 1104 AGATDE--TEESEENPE-VVNGVQSI--DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEV 1158
            + A+DE   E+S E+ E   NG + +   Y+YLL M I +LT E+ + LL  + +   E+
Sbjct: 1153 SVASDEDIEEKSHEDAENSTNGPEELYGTYEYLLGMKIWSLTKERYEKLLKQKQEREIEL 1212

Query: 1159 DDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKR 1214
            ++L K + + +W  DL+A +   +E  + D  A       +G    + G KI  KR
Sbjct: 1213 ENLLKLSAKDIWNADLEAFESGYEEFLQQDKEA-------RGGNVPNKGSKIKGKR 1261


>gi|346323318|gb|EGX92916.1| DNA topoisomerase 2 [Cordyceps militaris CM01]
          Length = 1614

 Score = 1092 bits (2823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/1241 (46%), Positives = 790/1241 (63%), Gaps = 93/1241 (7%)

Query: 7    LPLTTSNNANVVGPTAPN-----KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIY 61
            +PL    N ++V  + P      KT  + YQK +QLEHI+ RPDTYIGS+E   Q +W++
Sbjct: 90   VPLAEVENDSMVVDSTPKSAGKKKTATDTYQKLTQLEHIIKRPDTYIGSVESTEQQMWVF 149

Query: 62   EEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGD 121
             +E++ M ++TIS+VPG +KIFDEI+VNAAD KQR   M  +KV ID+E   ISV N+G 
Sbjct: 150  NKETQLMEYKTISFVPGFFKIFDEIMVNAADVKQRYTTMSFIKVNIDRESGQISVENNGK 209

Query: 122  GVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 181
            G+PVEIH++E +Y+PELIFGHLL  SN+DD  KKT GGRNGYGAKL N+FSTEF +E  D
Sbjct: 210  GIPVEIHEKEKIYIPELIFGHLLAGSNFDDEEKKTVGGRNGYGAKLCNVFSTEFTLECQD 269

Query: 182  GKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKK 240
                K+YKQ +T+NM K  +  I+  K  D + +++F PD  +F M + +++D+ +L+ +
Sbjct: 270  SGNGKRYKQTWTDNMSKMGKAKITSNKTSD-FVRITFMPDYKRFGMPNGIDEDLESLLYR 328

Query: 241  RVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE------------- 287
            RV D+AG + + +KV LNG  + + +F  Y D+Y KS+ +  ER  E             
Sbjct: 329  RVYDMAGTI-RGIKVHLNGEVIKIPTFKAYCDLYAKSIAK--ERSAEEGGEPTCSVEIDK 385

Query: 288  -----RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANV 342
                 RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+Q+   ++  +NK+ K   +
Sbjct: 386  DKSHPRWEVGFAVSDGTFQQVSFVNNIATTSGGTHVNYIADQITASLLKTLNKRKKGHTL 445

Query: 343  KAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVET 402
            K  +++NH+++FVN  IDNPAF SQTKE +T + S FGSKC L ++FLKK+ A+S  VE 
Sbjct: 446  KQSHLRNHIFIFVNCFIDNPAFTSQTKEQMTTKASLFGSKCTLGDQFLKKI-AQSEAVEN 504

Query: 403  LLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMA 462
            ++S+A  K  K + K+DG K   V   +KL +ANLAG R   +CTLILTEGDSAK LA++
Sbjct: 505  IMSFAEKKADKMMAKSDGNKRSRVSN-NKLVEANLAGSRRGHECTLILTEGDSAKGLAVS 563

Query: 463  GLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYG 522
            G +++  DR GVFPLRGKLLNVR+AS +Q+  N EI NIK+ LGLK    Y + KSLRYG
Sbjct: 564  GRAILDPDRIGVFPLRGKLLNVRDASIDQITKNQEIQNIKQFLGLKHKQNYTDTKSLRYG 623

Query: 523  HLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK 582
            HLMIM DQ                            DHDGSHIKGLLINF+   +PSLL+
Sbjct: 624  HLMIMADQ----------------------------DHDGSHIKGLLINFLQVQFPSLLQ 655

Query: 583  IPSFLVEFITPIVKA-----TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGT 637
            IP F  EF+TPI+K        K  K  SF++ P++  WK+S       W  KY KGLG+
Sbjct: 656  IPDFFREFVTPIMKVWQGSDPKKPTKQHSFFTQPEFNEWKQSHQHELGRWQSKYLKGLGS 715

Query: 638  STSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKE 697
            S++++ + YF N+  H K+F     ++ +  +LAFSKKK +ARK+WL  F PG +LD   
Sbjct: 716  SSNEDAQVYFTNLDQHLKEFEVMQPEEAQLFDLAFSKKKADARKEWLGNFVPGTYLDHGT 775

Query: 698  KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
            K I Y+DFVNKELILFSMAD  RSIPS+ DGLKPGQRK+++  FKRN  K+ KV + SGY
Sbjct: 776  KAITYTDFVNKELILFSMADNMRSIPSVADGLKPGQRKVMYSCFKRNLTKDKKVVELSGY 835

Query: 758  VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
            VSE SAYHHGEQSL  TI+G+AQ FVGSNNINLL+P+G FG+R  GG DAAS RYIFTRL
Sbjct: 836  VSEQSAYHHGEQSLQQTIIGLAQTFVGSNNINLLEPSGMFGSRLAGGSDAASPRYIFTRL 895

Query: 818  SPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPR 877
            SP  R +F   D+  L    +D   IEP  Y PIIP +LVNG++GIGTGWS+ IPNY+P 
Sbjct: 896  SPFARKIFLAADEPNLKQQYDDSNTIEPEVYAPIIPMILVNGADGIGTGWSTSIPNYHPT 955

Query: 878  DIVANVRRLL--------NGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE--V 927
            DIV N++R +        +G   EPM PW+RG+ GT E          Y   GI  +   
Sbjct: 956  DIVKNLKRRMGREGFTEDDGHPFEPMMPWFRGWKGTPEAAGPDR----YKFNGIAHQNDQ 1011

Query: 928  NETTLRIKELPIRRWTQDYREFLESIID--QNDSFIRGFRQYSDDTTVDFEVFLSEESMM 985
            N   + + ELPIR WT D++  LE +I   +  ++I+ +++++D  TV FE+ + E+ M 
Sbjct: 1012 NPNEVVVTELPIRMWTDDFKAKLEKVISGGEGAAWIKDYKEFNDHNTVHFEIMVDEKYMD 1071

Query: 986  RTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQL 1045
            +  +EGLL++FKL   ++TSN+  FD +G I+KYD  E I+EEF+  RL+ Y +RKK  L
Sbjct: 1072 KVLEEGLLERFKLQKQVATSNLVAFDIQGRIRKYDKVEDIMEEFYLYRLDMYLERKKYWL 1131

Query: 1046 ENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAG 1105
              L  +  +L+N+ RFI  +++  +VV  +++  L+ ELR + +  FP      +A    
Sbjct: 1132 NVLHRDYRRLKNQARFIQEIISNVLVVGKKRKQILVKELRDRKYEAFPPKKTGAKA---- 1187

Query: 1106 ATDETE----ESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
              DE E     + E+ E  +G  + DYDYLLSM I +LT E+++ LL    K   E D+L
Sbjct: 1188 --DEEELGQASNAEDDEAQDG-GARDYDYLLSMPIWSLTAERLEKLLEAIAKKKAEHDEL 1244

Query: 1162 RKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNG 1202
            +  + + LW +DLDA    + E DK  A   E + KI+  G
Sbjct: 1245 QAKSEKDLWCEDLDAF---MAEWDKQVAIDAEIQTKIRRLG 1282


>gi|336471051|gb|EGO59212.1| DNA topoisomerase 2 [Neurospora tetrasperma FGSC 2508]
 gi|350292130|gb|EGZ73325.1| DNA topoisomerase 2 [Neurospora tetrasperma FGSC 2509]
          Length = 1907

 Score = 1091 bits (2822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 580/1190 (48%), Positives = 782/1190 (65%), Gaps = 69/1190 (5%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T   KT  EMYQK +QLEHIL RPDTYIGS+E+  Q +W++ + +  M +R IS+VPGLY
Sbjct: 121  TGAAKTATEMYQKLTQLEHILKRPDTYIGSVERSEQKMWVFNKATGLMENRQISFVPGLY 180

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADN QRD  M  +KV I++E   ISV N+G G+PVEIH  E  YVPELIF
Sbjct: 181  KIFDEILVNAADNSQRDSSMTFLKVTINRESGEISVENNGKGIPVEIHGTEKCYVPELIF 240

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            GHLL  SN+DDN KKT GGRNGYGAKLTNIFS EF +E  D    K+YKQ +T+NM K +
Sbjct: 241  GHLLAGSNFDDNEKKTVGGRNGYGAKLTNIFSREFTLECQDSVNGKRYKQTWTDNMSKMA 300

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
             P I+  K  D + +++F+PD +KF M   ++DD+ AL+ +RV D+AG L       L  
Sbjct: 301  PPKITSNKAAD-FVRITFRPDFSKFGMADGIDDDLEALLYRRVYDMAGTLNFKTYCGLYA 359

Query: 260  HRVPVK--SFAEYVDMYPKSVTRFHERVNER-WEICVTLSEGQFQQVSFVNGIATIKGGT 316
              +  +    A+  D+ P +V    +R   + WE+  T+S+G FQQVSFVN IAT  GG+
Sbjct: 360  KAIAKERDEVADGEDVTPATVIFEQQRSEGKLWEVGFTVSDGSFQQVSFVNNIATTSGGS 419

Query: 317  HVDYVANQVANHVMAVVNKKNKNANVK-AHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HV+Y+A+Q+   +M  + KK    +     NVKN  ++F+N LIDNPAF SQTKE LT +
Sbjct: 420  HVNYIADQIIEVLMKELQKKKGKGHGLKTANVKNQFFIFINCLIDNPAFSSQTKEQLTTK 479

Query: 376  QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDA 435
             + FGSKC L + FLKKV  +S  ++ LLS+A+ K+ KDL KNDG+K + +    KL +A
Sbjct: 480  PAKFGSKCLLGDLFLKKVR-QSEAIDNLLSFADKKRDKDLAKNDGSKRKRISN-DKLIEA 537

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGR S++CTLILTEGDSA+ LA+AG +++  +R GVFPLRGK+LNVR+AS++Q+L N
Sbjct: 538  NYAGGRYSQECTLILTEGDSARGLAVAGRAILDPNRIGVFPLRGKMLNVRDASADQILKN 597

Query: 496  SEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFM 555
             E+ NIKK LGLK G  Y + K LRYGHLMIM DQ                         
Sbjct: 598  KEVENIKKFLGLKHGKVYTDTKDLRYGHLMIMADQ------------------------- 632

Query: 556  LAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA-----TNKNGKVLSFYSM 610
               D DGSHIKGLLINF    +PSLL+IP+F  EFITP+VK        K  ++  F+++
Sbjct: 633  ---DLDGSHIKGLLINFFECQFPSLLRIPNFFQEFITPVVKVWQGPNPKKPQRLQGFFTL 689

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            P YE WKE+       W  KY KGLG+ST+ + + YF N+  H K+F     ++ E  EL
Sbjct: 690  PQYEEWKEAHRNELRRWKYKYLKGLGSSTTDDAQLYFTNLNKHLKEFDVMTREESEMFEL 749

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AFSKKK +ARK+WL + EPG +LD   + I Y+DFVN+ELILFSMAD  RSIPSMVDGLK
Sbjct: 750  AFSKKKADARKEWLAKCEPGTYLDHSTEKISYTDFVNRELILFSMADNIRSIPSMVDGLK 809

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+LF  FK+N I + KV + +GYVS+ +AYHHGEQSL  TI+G+AQ+FVGSNNIN 
Sbjct: 810  PGQRKVLFGCFKQNLIHDQKVVELAGYVSKEAAYHHGEQSLQQTIIGLAQNFVGSNNINC 869

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+P+G FG+R  GG DAASARYI TRLSP+ R +F   D+  L++  +DG+ IEP  Y P
Sbjct: 870  LEPSGNFGSRLSGGSDAASARYIHTRLSPLARKIFHPLDEPNLEFQFDDGKLIEPKVYAP 929

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL------NGE--MMEPMHPWYRGF 902
            IIP VLVNG++GIGTGWS+ IPNY+P DIV N++R +      +GE    EPM PW+RG+
Sbjct: 930  IIPMVLVNGADGIGTGWSTSIPNYHPLDIVENLKRRMGRDSSGDGEEKPFEPMTPWFRGW 989

Query: 903  GGTIEKTASKEAGVTYTVTGIIE--EVNETTLRIKELPIRRWTQDYREFLESII--DQND 958
             GT E          +   GI+E    N   + + ELPIR WT D++  LE II  D++ 
Sbjct: 990  KGTPEPDGPNR----FKFNGIVEVNPQNPNEVDVTELPIRMWTDDFKSKLEEIIRGDKSP 1045

Query: 959  SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKK 1018
            S+I+ +++Y+D  TV F + L E+ M    ++GL++KFKLT T++T+N+  FD++G I K
Sbjct: 1046 SWIKDYKEYNDHQTVHFIIALEEKHMSSALRDGLIEKFKLTKTVATTNLVAFDTRGKIHK 1105

Query: 1019 YDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRT 1078
            Y+ P++I+EE++H RL  Y +RKK  L+    +  KL+N+ RFI  ++  ++VV+ +K++
Sbjct: 1106 YENPQEIMEEYYHYRLNLYGERKKHWLKVYHADYRKLQNQYRFISEIIENKLVVSKKKKS 1165

Query: 1079 DLLLELRQKGFTPFP-----KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLS 1133
             L+ ELR++ +  FP     +N KS +  +  A +E EE     + V G +  DYDYLLS
Sbjct: 1166 VLVQELRERKYEAFPPKSDGRNVKSPDEELGAADNEDEE-----DAVGGAR--DYDYLLS 1218

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
            M I +LT E++  L         E D+L   + + LW +DLDA   + +E
Sbjct: 1219 MPIWSLTFERLDKLKQQIAAKKAEHDELDALSEKDLWCRDLDAFTAEWEE 1268


>gi|338711459|ref|XP_003362534.1| PREDICTED: DNA topoisomerase 2-alpha-like [Equus caballus]
          Length = 1485

 Score = 1091 bits (2821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/1204 (48%), Positives = 786/1204 (65%), Gaps = 122/1204 (10%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29   SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88   ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K   G+++T ++F PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207  KPFNGEDYTCITFHPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266  SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
             F  YVDMY K         +   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266  GFRSYVDMYLKDKVDETGNPLKIIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318  VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326  VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 385

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
             +FGS C+LSE+F+K      GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 386  KNFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444

Query: 436  NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
            N AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N
Sbjct: 445  NDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504

Query: 496  SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
            +EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                      
Sbjct: 505  AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542

Query: 553  CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                  D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543  ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 594

Query: 613  YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
            +E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 595  FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653

Query: 673  SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
            SKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D +R
Sbjct: 654  SKKQIDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE +  S I     
Sbjct: 714  SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEVNTQSMI----- 768

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
                                                  P+ R LFP  DD  L +L +D 
Sbjct: 769  --------------------------------------PLARLLFPPKDDHTLKFLYDDN 790

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q++EP WY+PIIP VLVNG+EGIGTGWS  IPN++ R+IV N+RRL++GE   PM P Y+
Sbjct: 791  QRVEPEWYIPIIPMVLVNGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMLPSYK 850

Query: 901  GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
             F GTIE+ A  +    Y ++G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++
Sbjct: 851  NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 906

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
                I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +
Sbjct: 907  TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 966

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ 
Sbjct: 967  KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1026

Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + +L+  L Q+G+   P         K  +      +D  +E+E++  V +   +  ++Y
Sbjct: 1027 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDSEKETEKSGSVTDSGPT--FNY 1084

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R++  +E++ L++ +P  LW +DL A    ++EL+  +A+
Sbjct: 1085 LLDMPLWYLTKEKKDELCKLRNEKEQELETLKRKSPSDLWKEDLAAF---IEELEAVEAK 1141

Query: 1191 AEEE 1194
             +++
Sbjct: 1142 EKQD 1145


>gi|429856265|gb|ELA31187.1| DNA topoisomerase 2 [Colletotrichum gloeosporioides Nara gc5]
          Length = 1781

 Score = 1091 bits (2821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 651/1535 (42%), Positives = 899/1535 (58%), Gaps = 182/1535 (11%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K   + YQK +QLEHI+ RPDTYIGS+E   Q +W++ +E+K M +R +++VPGLYKIFD
Sbjct: 125  KNATDTYQKLTQLEHIIKRPDTYIGSVEPTEQPMWVFNKETKLMEYRKVTFVPGLYKIFD 184

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNKQRD  M  +KV +D+E+  ISV N+G G+PVEIH +E +Y+PE+IFGHLL
Sbjct: 185  EILVNAADNKQRDATMTYMKVTVDRENGEISVENNGKGIPVEIHGKEKIYIPEMIFGHLL 244

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            T SNYDD  KKT GGRNGYGAKL N+FS +F +E  D    K+YKQV+T+NM K  +  I
Sbjct: 245  TGSNYDDEEKKTVGGRNGYGAKLCNVFSEQFTLECQDSTNGKRYKQVWTDNMSKCGKAKI 304

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +  K  D + +V+FKPD  +F+MT ++DD+ AL+++RV D+AG + ++VK  LNG  + +
Sbjct: 305  TSSKTSD-FVRVTFKPDFKRFSMTGIDDDLEALIQRRVYDMAGTV-RNVKTYLNGTHIKL 362

Query: 265  KSFAEYVDMYPKSVTRFHERVNE------------------RWEICVTLSEGQFQQVSFV 306
             +F  Y +MY K++ +  ER  E                  RWEI  T+S+G FQQ+SFV
Sbjct: 363  -AFKGYCEMYAKAIAK--ERGAEEGVEPKVVVEIDKTDAHPRWEIGFTVSDGSFQQISFV 419

Query: 307  NGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDS 366
            N IAT  GGTHV+Y+A+Q+   ++  ++KK K   +K ++++NH+++FVN  ++NPAF S
Sbjct: 420  NSIATTSGGTHVNYIADQITGSLLKTLDKKKKGHALKQNHIRNHIFIFVNCFVNNPAFTS 479

Query: 367  QTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV 426
            QTKE +T + S FGSKC L+E+FLKK+ AKS  ++ ++ +A  K  K + K+DG K   +
Sbjct: 480  QTKEQMTTKVSQFGSKCPLTEDFLKKI-AKSDAIQNIIDFAEKKADKMMAKSDGNKRSRI 538

Query: 427  RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
               SKL DANLAG R+  +CTLILTEGDSAK+LA+AG +++  DR GVFPLRGK+LNVR+
Sbjct: 539  SN-SKLVDANLAGTRHGHECTLILTEGDSAKSLAVAGRAILDPDRIGVFPLRGKMLNVRD 597

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIF 546
            AS +Q+  N EI NIK+ LGLK    YN+ K LRYGHLMIM DQ                
Sbjct: 598  ASIDQITKNQEIQNIKQFLGLKHKAVYNDTKGLRYGHLMIMADQ---------------- 641

Query: 547  AWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA-----TNKN 601
                        DHDGSHIKGLLINF+   +PSLL+IP F  EFITPIVK        K 
Sbjct: 642  ------------DHDGSHIKGLLINFLQVQYPSLLQIPDFFREFITPIVKVWQGPNPKKP 689

Query: 602  GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWED 661
             ++ SF++ P YE WKES     S W  KY+KGLGTS++++ + YF N+  H K+F    
Sbjct: 690  QRLKSFFTQPQYEEWKESHTSELSRWHYKYFKGLGTSSNEDAQVYFTNLDDHLKEFNTMK 749

Query: 662  DQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
              + E  ELAFSKKK +ARK+WL  F PG +LD   K I Y+DFVNKELILFSMAD  RS
Sbjct: 750  PDEAELFELAFSKKKADARKEWLGNFVPGTYLDHSTKSITYTDFVNKELILFSMADNMRS 809

Query: 722  IPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQD 781
            IPS+VDGLKPGQRK+++  FKRN  K+ KV + +GYVSE ++YHHGE SL  TI+G+AQ+
Sbjct: 810  IPSVVDGLKPGQRKVMYACFKRNLTKDQKVIELAGYVSEQTSYHHGEVSLQQTIIGLAQN 869

Query: 782  FVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQ 841
            FVGSNNIN L+P+G FG+R  GG DAAS RYI TRLSP  R +F   D+  L+   EDG+
Sbjct: 870  FVGSNNINCLEPSGNFGSRLAGGSDAASPRYIHTRLSPFARKIFSTLDEPNLEPQYEDGK 929

Query: 842  QIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN--------GEMME 893
            +IEP  Y P+IP +L NG++GIGTGWS+ IPNY+P  IV N++R +         G   E
Sbjct: 930  RIEPKCYAPVIPMILCNGADGIGTGWSTSIPNYHPMHIVENLKRRMGRLDPENPEGAPFE 989

Query: 894  PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETT--LRIKELPIRRWTQDYREFLE 951
            PM PW+RG+ GT  + A K+    Y   GI  +++E T  + I ELPIR WT D++  LE
Sbjct: 990  PMMPWFRGWKGT-PQVADKD---RYKFNGIC-DIDEKTGEVVITELPIRMWTDDFKAKLE 1044

Query: 952  SIID--QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHL 1009
             +I   +   +I+ +++++D   V F + + ++       +GL+++FKLT  ++TSN+  
Sbjct: 1045 EVISGTKGPVWIKDYKEFNDHKNVHFVIQMDDKHTKDVMSDGLMERFKLTKQVATSNLVA 1104

Query: 1010 FDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGE 1069
            FD+ G I+KY+  E ILEEF+H RL+ Y +RKK  L     +  KL  + RFI  +++G+
Sbjct: 1105 FDTNGQIRKYEKVEDILEEFYHYRLDMYAERKKHWLGVYHADFRKLSEQARFIREIIDGK 1164

Query: 1070 IVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYD 1129
            +V+  +K+  L+ EL ++ + PFP+N    +      TDE  E +E  E     QS  YD
Sbjct: 1165 LVIAKKKKAVLVEELAKRKYEPFPRNKD--KQAKKKNTDEEMEGDEEDEEGADEQSNAYD 1222

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL------DMQLD- 1182
            YLLSM + +LT E++  L    +    E D L   + + LW +DLD         M LD 
Sbjct: 1223 YLLSMPLWSLTQERLDRLQRQIESKKAEHDSLLALSEKDLWCQDLDEFVAEWENQMALDA 1282

Query: 1183 ELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDK-----KSNNARATEAMGE 1237
            E+  S  R      K  G G G            + A+K+D      +   A A      
Sbjct: 1283 EIQTSIRRLGRRVSKKIGAGKG------------RKAKKDDDEYEPGERKRATAKVKAAA 1330

Query: 1238 MDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGV 1297
               VT+    +  A  +KA A+K D   ED   D     A L ++ +S            
Sbjct: 1331 APKVTEKAAERFAAMFEKAKAKKED---EDAFSD--DDFASLGKKTSSK----------- 1374

Query: 1298 METEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIAAPEEGKKGGRKA 1357
                    PA  ++P +R A  KK      SDS      DDDE F              +
Sbjct: 1375 --------PAAPEKP-QRAATSKKKPIYTLSDS------DDDEEF-------------AS 1406

Query: 1358 AGNSKAAKPA-------AETKKRGPAKKQQPE-----------ASLGQRLLTEMLKPAES 1399
             G   A+ PA       ++++K   AKK  P            A LG++  TE  KPA +
Sbjct: 1407 LGKPSASAPAESTEDVSSQSQKSAAAKKPSPRVEELDDSDDDFAGLGKKSSTE--KPAAA 1464

Query: 1400 SPEKKVRKMRASPFNK----------KSGSMLGRAGTIEEPSGSSPSTSEEVAEVLPPK- 1448
               K     RA+   K          +  S    + +IE+ +    S S E A     K 
Sbjct: 1465 VAVKPTASRRAASTKKYVIDDLSDEDEFASAAEDSASIEKSASVEKSVSVEPAPTKSSKN 1524

Query: 1449 ---ARPQRAN--RRQARYVLSD-SESEKATDDSEF 1477
               +R  RA+  +++  YV+ D SE E   DD++ 
Sbjct: 1525 AAASRGSRASAVKKKPSYVIDDSSEEESEADDNQI 1559


>gi|167391639|ref|XP_001739872.1| DNA topoisomerase [Entamoeba dispar SAW760]
 gi|165896290|gb|EDR23749.1| DNA topoisomerase, putative [Entamoeba dispar SAW760]
          Length = 1351

 Score = 1090 bits (2820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/1160 (48%), Positives = 766/1160 (66%), Gaps = 58/1160 (5%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEE-----ESKTMIHRTISYVPGLYK 81
            +E++Y K S  E IL RPDTYIGSIE++ + +W+YEE     E   M+ + IS  PGL+K
Sbjct: 8    LEDIYVKLSHKEQILTRPDTYIGSIERNDEQVWLYEEPTEQYEEGRMVQKVISLAPGLFK 67

Query: 82   IFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            I+DEILVNA+DN QRDPKM  +KV I  E + I+V+N+G G+P+EIH++E +Y+PELIFG
Sbjct: 68   IYDEILVNASDNFQRDPKMTTIKVTI--EGNSITVYNNGKGIPIEIHKKENIYIPELIFG 125

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            HLLTSSNY D+ KK TGGRNGYGAKL NIFST+F IET DGK++  YKQ + NNM  K E
Sbjct: 126  HLLTSSNYKDDDKKVTGGRNGYGAKLANIFSTKFSIETCDGKKI--YKQTWKNNMSDKEE 183

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            P I   K+ + +TKV+F PD  +F M  +EDD   L+ +R  D+AGC     ++ +NG +
Sbjct: 184  PEIESVKKVEEYTKVTFTPDYKRFQMKGMEDDARRLLIRRAYDIAGC-NPGKRIWINGKK 242

Query: 262  VPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
            V  K+FAEY  MY        E+  ERW+ICV  S+G+  Q+SFVN I T  GGTHVDYV
Sbjct: 243  VCFKNFAEYARMYVGDEPIVSEKAGERWDICVCASKGEPMQISFVNSINTSHGGTHVDYV 302

Query: 322  ANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFG 380
               +  ++   + K NK  A +K   +KNHL+VFVN+LI+NPAFDSQTKETL  + + FG
Sbjct: 303  TGLMTKYLAEKMKKLNKKGAEIKPFQIKNHLFVFVNSLIENPAFDSQTKETLKTQVNKFG 362

Query: 381  SKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGG 440
            SK  LS++F K++  K  +V+ +L+WA  K   DL K+ G KT  + GI KL+DAN AG 
Sbjct: 363  SKPTLSDKFFKEL-GKLSVVDDILAWAIKKGEMDLNKSGGKKTARITGIPKLDDANKAGT 421

Query: 441  RNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGN 500
            +    CTLILTEGDSAK LA++GLSVVGRD +GVFPLRGK LN RE + ++V  N E  N
Sbjct: 422  KEGNLCTLILTEGDSAKTLAVSGLSVVGRDYYGVFPLRGKPLNAREIAPSKVKENQEFEN 481

Query: 501  IKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDH 560
            I KI+GL+ G  Y+++  LRYG +MIM DQ                            D 
Sbjct: 482  IAKIMGLRYGKVYSSINELRYGSVMIMADQ----------------------------DF 513

Query: 561  DGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV-LSFYSMPDYEAWKES 619
            DGSHIKGLLIN+ H+FWPSLLKI +FLVEFITPIVK   K GK  +SF+++P +  WK++
Sbjct: 514  DGSHIKGLLINYFHTFWPSLLKIDNFLVEFITPIVKV--KRGKQEISFFTLPQFNEWKDA 571

Query: 620  L--GGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
                G    W IKYYKGLGTS   + K YF ++  HK  F ++     E I+LAF++K+ 
Sbjct: 572  RIQEGQLKKWEIKYYKGLGTSKDSDAKAYFSDLDTHKIKFAYDGASSDEVIDLAFNRKRA 631

Query: 678  EARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKIL 737
            + RK+WL  ++P  +LDQ    I Y DFV+KELILFS  D +RSIPS+VDGLKP QRK+L
Sbjct: 632  DDRKEWLKGYDPNTYLDQDVDSISYEDFVHKELILFSYDDCERSIPSVVDGLKPSQRKVL 691

Query: 738  FCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQF 797
            +   ++N +KE KV+Q SG VSE S+YHHGE SL +TI+ MAQ+F GSNN+N L P+GQF
Sbjct: 692  WTCLEKNIMKELKVSQLSGLVSEKSSYHHGEVSLQATIVNMAQNFCGSNNVNWLLPSGQF 751

Query: 798  GTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLV 857
            G+R  GGKD A+ARYI+TRLS I+R+L PKDDD++L+YL ++ ++IEP +Y PIIPTVLV
Sbjct: 752  GSRLGGGKDQAAARYIYTRLSSISRYLCPKDDDQILEYLVDEDRRIEPKYYCPIIPTVLV 811

Query: 858  NGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVT 917
            NG++GIGTGWS+ + NYNP D+V N RR LNGE  + M PW+RG+ G + K      G  
Sbjct: 812  NGADGIGTGWSTAVSNYNPLDLVDNCRRYLNGEEFKEMKPWFRGWTGQLRKNKD---GSG 868

Query: 918  YTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV 977
            Y   G    + +  + I ELPI+ WT  Y++ LE  I+     ++G+ +Y    TV F +
Sbjct: 869  YDCYGKWRRLADDKIEITELPIQIWTDTYKQHLEKCIEA--KIVKGYSEYHMVNTVHFVI 926

Query: 978  FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFY 1037
             L +        E +    KL +++ T+NMHLF+S+  I KY T   IL EF  +R++ Y
Sbjct: 927  DLVQP----MSDEDIWTNLKLVSSVKTTNMHLFNSEYKITKYHTVLDILAEFCDVRMKGY 982

Query: 1038 EKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSK 1097
            E+RKK  +E++E +L+ L NKVRFI  V+ G++++NNRK+ +L  +L + GF       K
Sbjct: 983  EERKKAIIESMERQLMILSNKVRFIKMVIEGDLIINNRKKNELYKDLIKLGFDQIRDPKK 1042

Query: 1098 SIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEE 1157
            + ++   G +++ E  EE+ +   G     YDYLL M I TLT EK + L+ D D L  +
Sbjct: 1043 ANKSKPIGESEDAEIKEEDDDDEVG----GYDYLLGMKIWTLTYEKAKKLMEDCDDLKTQ 1098

Query: 1158 VDDLRKATPESLWVKDLDAL 1177
            +D ++    + +W+KDLDA 
Sbjct: 1099 IDTVKTTPVKDMWLKDLDAF 1118


>gi|172998|gb|AAB36610.1| topoisomerase II [Saccharomyces cerevisiae]
          Length = 1429

 Score = 1090 bits (2819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 578/1203 (48%), Positives = 784/1203 (65%), Gaps = 79/1203 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL+KIFDEILVNA
Sbjct: 12   YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 71

Query: 91   ADN-KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            ADN K RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNY
Sbjct: 72   ADNNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNY 131

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DD+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM     P I+  K+
Sbjct: 132  DDDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKK 191

Query: 210  GDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAE 269
            G ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG  + +++F  
Sbjct: 192  GPSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKN 250

Query: 270  YVDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIA 310
            YV++Y KS+                   T  +ER+N RWE+   +S+  FQQ+SFVN IA
Sbjct: 251  YVELYLKSLEKKRQLDNGEDGAAKSDIPTILYERINNRWEVAFAVSDISFQQISFVNSIA 310

Query: 311  TIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
            T  GGTHV+Y+ +Q+    ++ + KK K  +VK+  +KN++++F+N LI+NPAF SQTKE
Sbjct: 311  TTMGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKE 369

Query: 371  TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGIS 430
             LT R   FGS+CE+  E++ K+  K+ +   +   A+  +   LKK+DGT+   +    
Sbjct: 370  QLTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALKKSDGTRKSRITNYP 428

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KLEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++
Sbjct: 429  KLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASAD 488

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            Q+L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                     
Sbjct: 489  QILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD--------------------- 527

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFY 608
                   QDHDGSHIKGL+INF+ S +  LL I  FL+EFITPI+K   T      ++FY
Sbjct: 528  -------QDHDGSHIKGLIINFLESSFLGLLDIQGFLLEFITPIIKVSITKPTKNTIAFY 580

Query: 609  SMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAI 668
            +MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F      D + I
Sbjct: 581  NMPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYI 639

Query: 669  ELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
            +LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG
Sbjct: 640  DLAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDG 699

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
             KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI
Sbjct: 700  FKPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNI 759

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
             LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L  Y+ ED + +EP WY
Sbjct: 760  YLLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWY 819

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            +PI+P +LVNG+EGIGTG S+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+
Sbjct: 820  LPILPMILVNGAEGIGTGRSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEE 879

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFR 965
                   + Y + G IE++ +  L I ELP R WT   +E+L   +  ND    +I+   
Sbjct: 880  IEP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDME 935

Query: 966  QYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQI 1025
            +  DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +I
Sbjct: 936  EQHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEI 994

Query: 1026 LEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELR 1085
            L EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL 
Sbjct: 995  LSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELE 1054

Query: 1086 QKGFTPFPK---------NSKSIEAV--VAGAT----DETEESEENPEVVNGVQSI--DY 1128
              GF  F K         N +  E +  V GAT    DE    E+   V+NG + +   Y
Sbjct: 1055 NLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTY 1114

Query: 1129 DYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSD 1188
            +YLL M I +LT E+ Q LL  + +   E+++L K + + +W  DL A ++   E  + D
Sbjct: 1115 EYLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRD 1174

Query: 1189 ARA 1191
            A A
Sbjct: 1175 AEA 1177


>gi|156848882|ref|XP_001647322.1| hypothetical protein Kpol_1002p113 [Vanderwaltozyma polyspora DSM
            70294]
 gi|156118007|gb|EDO19464.1| hypothetical protein Kpol_1002p113 [Vanderwaltozyma polyspora DSM
            70294]
          Length = 1404

 Score = 1089 bits (2817), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/1243 (46%), Positives = 790/1243 (63%), Gaps = 88/1243 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT  E YQK SQLEHIL RPDTYIGS+E   Q  WIY  E++++  + +  VPGL+KIFD
Sbjct: 6    KTASERYQKISQLEHILKRPDTYIGSVEVQEQEQWIYNVENESLEEKQVKIVPGLFKIFD 65

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP M  + V I+ E +LI + N G G+P+EIH +E +Y+PELIFGHLL
Sbjct: 66   EILVNAADNKVRDPSMKRIDVNINPEENLIEIKNDGKGIPIEIHDKEKIYIPELIFGHLL 125

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD+ KK TGGRNGYGAKL NIFSTEFI+ETAD    KKY Q + +NM     P I
Sbjct: 126  TSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETADPSTGKKYIQRWEDNMNTCHPPKI 185

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +  K   ++TKVSFKPDL +F M  L+DDVV +M++RV D+ G + + + V L+G  + +
Sbjct: 186  TSYKNSTSYTKVSFKPDLKRFKMEKLDDDVVGVMRRRVYDINGSV-RDINVYLDGKPLKI 244

Query: 265  KSFAEYVDMYPKSV------------------TRFHERVNERWEICVTLSEGQFQQVSFV 306
            ++F  YV++Y KS+                  T  +E+VN+RWE+  + SE  FQQVSFV
Sbjct: 245  RNFKSYVELYLKSLEKKKLTESGESTEDLQTPTILYEKVNDRWEVAFSSSEASFQQVSFV 304

Query: 307  NGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDS 366
            N IAT  GGTHV+Y+ +Q+   V   + KK+K    K   +KN++++F+N+LI+NPAF S
Sbjct: 305  NSIATTSGGTHVNYITDQIVKKVSEAIKKKSKKTV-KPFQIKNNMFIFINSLIENPAFTS 363

Query: 367  QTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV 426
            QTKE LT R   FGSKCELS  F+ K+  K+   + +L  AN      LKK+DGT+   +
Sbjct: 364  QTKEQLTTRVRDFGSKCELSNVFINKI-MKTDFFDKILDVANQNDQNALKKSDGTRKIRI 422

Query: 427  RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
                KLEDAN AG +   +CTLILTEGDSA + A+ GL+VVGRD FG +PLRGK+LNVRE
Sbjct: 423  TEYPKLEDANKAGTKEGHKCTLILTEGDSALSQAVLGLTVVGRDYFGCYPLRGKMLNVRE 482

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIF 546
            AS++Q+  N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTDQ                
Sbjct: 483  ASADQINKNAEIEAIKKIMGLQHKKKYEDTKSLRYGHLMIMTDQ---------------- 526

Query: 547  AWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPI--VKATNKNGKV 604
                        DHDGSHIKGL+INF+ + +P LL IP FL EFITPI  VK +    + 
Sbjct: 527  ------------DHDGSHIKGLIINFLETSFPGLLNIPEFLQEFITPIIKVKISKPRKQT 574

Query: 605  LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD 664
            + FY++PDYE W++  G N + W  KYYKGLGTS  +E +EYF ++  H K F    + D
Sbjct: 575  IQFYNIPDYEKWRDEEGQNCT-WKHKYYKGLGTSLGQEFREYFADLDRHLKIFHQLQEDD 633

Query: 665  GEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPS 724
             + IELAFSKKK + RK+WL Q+EPG  LD     I  SDF+NKELILFS+AD  RSIPS
Sbjct: 634  KKLIELAFSKKKADDRKEWLRQYEPGTVLDPNLDAIPISDFINKELILFSLADNVRSIPS 693

Query: 725  MVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVG 784
            ++DG KPGQRK+LFC FK N   E KV   +  VSE ++YHHGE+SL  TI+G+AQ+FVG
Sbjct: 694  VLDGFKPGQRKVLFCCFKINLTYEIKVGTLAAKVSEKTSYHHGEESLQQTIVGLAQNFVG 753

Query: 785  SNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIE 844
            +NNI LL+P G FG+R  GGKDAA+ARYI T+L+ + R +F   DD L +YL +DG  IE
Sbjct: 754  TNNIYLLKPAGSFGSRATGGKDAAAARYIHTQLNKVARSIFHPSDDALFNYLEDDGSPIE 813

Query: 845  PTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGG 904
            P WY+PIIP VLVNG+EGIGTGWS+ IP++NP DI+ N+R L+N E+M+ M+PWYRG+ G
Sbjct: 814  PEWYLPIIPMVLVNGAEGIGTGWSTNIPSFNPLDIIKNIRHLMNDEVMDEMYPWYRGWKG 873

Query: 905  TIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FI 961
             +EK         + + G +E+V    L I E+P R WT   +E+L   +  N+    +I
Sbjct: 874  VVEKVDDHR----FRLYGKVEQVGPNVLEITEVPARTWTSSIKEYLLLGLSGNEKTKPWI 929

Query: 962  RGF-RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYD 1020
            +    Q+++D  + F + L+ E M +TK+ G+  +FKL + ++  NM  FD+ G I+KYD
Sbjct: 930  KDMEEQHTND--IRFIITLTPEEMAKTKKIGVYDRFKLVSQVNLKNMVAFDAHGKIRKYD 987

Query: 1021 TPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDL 1080
            T   IL EF+++RLEFY+KRK    + L+  + K+  +V+F+  +++ E  V+N+ +  +
Sbjct: 988  TVLDILTEFYYVRLEFYQKRKDYMSQKLQWTVEKISFQVKFLKMIIDKEYTVSNKAKKII 1047

Query: 1081 LLELRQKGFTPFPKNSKSIEAVV-------------AGATDETEESEENPEVVNGVQSID 1127
            + EL   GF    K+ K     V               A +E +++   P  + G     
Sbjct: 1048 MKELEGFGFPRINKDGKPHYGSVKIEEIEEGNEIEEGNANEEQDDTVHKPSDIVG----S 1103

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL------ 1181
            YDYLL M +  LT+E+ + L A + +   E++ L K +P+ LW  DL+A + +       
Sbjct: 1104 YDYLLGMKLWDLTMERYEKLRAQKQEKEIELETLLKLSPKDLWNTDLEAFEKEYQEFLLL 1163

Query: 1182 -DELDKSD--ARAEEERMKIKGNGNGDAGPKIVAKRAPKNARK 1221
             +EL   D  +  + +R + K  G+ D  P   AK+  K  +K
Sbjct: 1164 DEELRNGDIPSAGKGKRKRGKAGGDDDYDPSKKAKKPRKQTKK 1206


>gi|326921999|ref|XP_003207240.1| PREDICTED: DNA topoisomerase 2-beta-like, partial [Meleagris
            gallopavo]
          Length = 1688

 Score = 1086 bits (2809), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 589/1204 (48%), Positives = 777/1204 (64%), Gaps = 119/1204 (9%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T+   ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLY
Sbjct: 158  TSKKMSVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLY 216

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADNKQRD  M  +K+ ID E ++IS+ N+G G+PV  H+ E VYVP LIF
Sbjct: 217  KIFDEILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIF 276

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            G LLTSSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K S
Sbjct: 277  GQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTS 336

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
            EP I K  EGD++T ++F+PDL+KF M  L+ D+V+LM +R  DLAG   K VKV LNG 
Sbjct: 337  EPKI-KHFEGDDYTCITFQPDLSKFKMEKLDKDIVSLMTRRAYDLAGSC-KGVKVMLNGK 394

Query: 261  RVPVKSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATI 312
            ++PV  F  YVD+Y K        ++   HE VNERW++C+TLSE  FQQ+SFVN IAT 
Sbjct: 395  KLPVNGFRSYVDLYVKDKLDETGVALKVIHEVVNERWDVCLTLSEKGFQQISFVNSIATT 454

Query: 313  KGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
            KGG HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVFVN LI+NP+FDSQTKE 
Sbjct: 455  KGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNCLIENPSFDSQTKEN 514

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGIS 430
            +TL+  SFGSKC+LSE+F K   +  GI+E++L+W  FK    L KK    K   ++GI 
Sbjct: 515  MTLQPKSFGSKCQLSEKFFK-AASNCGIIESILNWVKFKAQTQLNKKCSSVKHSKIKGIP 573

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KL+DAN AG                                   F +             
Sbjct: 574  KLDDANDAGN----------------------------------FFM------------- 586

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            Q++ N+EI NI KI+GL+    Y +   +KSLRYG +MIMTDQ                 
Sbjct: 587  QIMENAEINNIIKIVGLQYKKSYEDPESLKSLRYGKIMIMTDQ----------------- 629

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSF 607
                       D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSF
Sbjct: 630  -----------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSF 676

Query: 608  YSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA 667
            YS+P+++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  A
Sbjct: 677  YSIPEFDEWKKHME-NHKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAA 735

Query: 668  IELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSM 715
            I LAFSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS 
Sbjct: 736  ITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSN 795

Query: 716  ADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTI 775
            +D +RSIPS+VDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI
Sbjct: 796  SDNERSIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTI 855

Query: 776  LGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDY 835
            + +AQ+FVGSNN+NLLQP GQFGTR  GGKDAAS RYIFT LSP+ R LFP  DD LL +
Sbjct: 856  VNLAQNFVGSNNVNLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARLLFPSVDDNLLKF 915

Query: 836  LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPM 895
            L +D Q++EP WY+PIIP VLVNG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM
Sbjct: 916  LYDDNQRVEPEWYIPIIPMVLVNGAEGIGTGWACKLPNYDTREIVNNVRRMLDGLDPHPM 975

Query: 896  HPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII 954
             P Y+ F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++
Sbjct: 976  LPNYKNFKGTIQELGQNQ----YVVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPML 1031

Query: 955  ---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFD 1011
               ++  + I  +++Y  DTTV F V ++EE + + +  GL K FKL T+++ ++M LFD
Sbjct: 1032 NGTEKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSMVLFD 1091

Query: 1012 SKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIV 1071
              G +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I 
Sbjct: 1092 HMGCLKKYETVQDILKEFFDLRLHYYSLRKEWLVGMLGAESTKLNNQARFILEKIQGKIT 1151

Query: 1072 VNNRKRTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            + NR + DL+  L Q+G+   P K  K  +   A   D    +++           D++Y
Sbjct: 1152 IENRSKRDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDPQNPNDDASSASGSTSGPDFNY 1211

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            +L+M++ +LT EKV+ L+  RD    E++DL++ +   LW +DL A    ++EL+K +A+
Sbjct: 1212 ILNMSLWSLTKEKVEELIKHRDSKERELNDLKRKSASDLWKEDLAAF---VEELEKVEAQ 1268

Query: 1191 AEEE 1194
              E+
Sbjct: 1269 ERED 1272


>gi|346970470|gb|EGY13922.1| DNA topoisomerase [Verticillium dahliae VdLs.17]
          Length = 1743

 Score = 1086 bits (2808), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/1228 (46%), Positives = 790/1228 (64%), Gaps = 91/1228 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+EE YQK +QLEHI+ RPDTYIGS+E+    +W+Y +E++ M  R ++ VPGLYKIFD
Sbjct: 120  KTVEETYQKLTQLEHIVKRPDTYIGSVERTEMPMWVYNKETQLMEFRKVTTVPGLYKIFD 179

Query: 85   EILVNAADNKQR-----DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELI 139
            EILVNAAD K R     +  +  +KV ID+E   IS+ N+G G+PVE+H++ G+YVPE+I
Sbjct: 180  EILVNAADIKVRREESGEEPVTHIKVNIDREAGQISIENNGKGIPVEMHKQHGIYVPEMI 239

Query: 140  FGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
            FGHLLT SNYDD+ KKTTGGRNGYGAKL N+FSTEF +E  D    K+YKQ +T+NM K 
Sbjct: 240  FGHLLTGSNYDDDEKKTTGGRNGYGAKLCNVFSTEFTVECQDSANGKRYKQTWTDNMSKM 299

Query: 200  SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
             +  I+  K  D + +++FKPD  +F+M  ++DD+ AL+ +RV D+AG + K +KV LNG
Sbjct: 300  GKAKITSSKSSD-FVRITFKPDFKRFSMEGIDDDLEALLYRRVYDMAGTI-KGIKVHLNG 357

Query: 260  HRVPVKSFAEYVDMYPKSVTRFHERVNE-----------------RWEICVTLSEGQFQQ 302
              V   +F  Y +MY K++ +  ER +E                 RW++  T+S+G FQ 
Sbjct: 358  TVVKPSAFKGYSEMYAKAIAK--ERASEEGGEPKVTVEMDKNDNPRWDVGFTVSDGSFQH 415

Query: 303  VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNP 362
            +SFVN IAT  GGTHV+YVA+Q+  ++   ++KK K   +K  +++NH++VF+N  I+NP
Sbjct: 416  ISFVNNIATTSGGTHVNYVADQIVQYLTKYLDKKKKGHALKPQHIRNHIFVFINCRIENP 475

Query: 363  AFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
            +F+SQTKE +T + SSFGSKC LSE FLKKV A S  ++ ++S+A  K  K + K+DG +
Sbjct: 476  SFNSQTKEQMTTKVSSFGSKCVLSEAFLKKVAA-SDAIQNIMSFAEKKADKMMAKSDGNR 534

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
               +   +KL DANLAG +   +CTLILTEGDSAK+LA+AG +++  DR GVFPLRGK+L
Sbjct: 535  RSRINN-AKLVDANLAGTKRGHECTLILTEGDSAKSLAVAGRAILDPDRIGVFPLRGKML 593

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            NVR+AS  Q+  N EI NIK+ LGLK    Y + K LRYGHLMIM DQ            
Sbjct: 594  NVRDASIEQITKNQEIQNIKQFLGLKHKQNYTDTKGLRYGHLMIMADQ------------ 641

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA-TNKN 601
                            DHDGSHIKGLLINF+   +PSLL+IP F  EFITPIVK    KN
Sbjct: 642  ----------------DHDGSHIKGLLINFLQVQYPSLLQIPDFFREFITPIVKVWQGKN 685

Query: 602  GK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDF 657
             K    + +F++ P YE WKE+     S W  KYYKGLGTS++++ + YF N+  H K+F
Sbjct: 686  PKNPQKLQAFFTQPQYEEWKEAHKNEISRWEYKYYKGLGTSSNEDAQVYFTNLDDHLKEF 745

Query: 658  VWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMAD 717
                  + E  +LAFSKKK +ARK+WL  F PG +LD   K I Y DFVN+ELILFSMAD
Sbjct: 746  DTMQSSEAELFDLAFSKKKADARKEWLGNFVPGTYLDHSTKSITYDDFVNRELILFSMAD 805

Query: 718  LQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
              RSIPS++DGLKPGQRK++F  FKRN  K+ KV + +GYVSE +AYHHGE SL  TI+G
Sbjct: 806  NMRSIPSVLDGLKPGQRKVMFACFKRNLTKDQKVVELAGYVSEKAAYHHGEMSLQQTIIG 865

Query: 778  MAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLN 837
            +AQ+FVGSNN+N L+P+G FG+R  GG DAAS RYI TRLSP  R +F   D+  L+   
Sbjct: 866  LAQNFVGSNNVNCLEPSGNFGSRLAGGSDAASPRYIHTRLSPFARKIFSVLDEPNLEVQM 925

Query: 838  EDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM------ 891
            EDG+ IEP  Y PIIP VL NG++GIGTGWS+ IPNY+P +IV  ++R + G +      
Sbjct: 926  EDGKPIEPKVYAPIIPMVLCNGADGIGTGWSTSIPNYHPMEIVRAIKRRM-GRLDSDDTE 984

Query: 892  ---MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNET-TLRIKELPIRRWTQDYR 947
                E M PW+RG+ GT E  A K+    Y   GI E  ++T  + IKELPIR WT D++
Sbjct: 985  EKPFETMMPWFRGWKGTPE-PAEKD---RYKFNGIYETDDKTGEIIIKELPIRMWTDDFK 1040

Query: 948  EFLESIID--QNDSFIRGFRQYSDDTTVDFEVFLSEESM--MRTKQEGLLKKFKLTTTIS 1003
              LE +I   +  ++I+ +++++D   V+F + L E+    +    EG++ +FKL   I+
Sbjct: 1041 AKLEEVISGAKGPAWIKDYKEFNDHKNVNFVIQLDEKHYKDIHKTHEGIMDRFKLNKQIA 1100

Query: 1004 TSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFIL 1063
            TSN+  FDS G I+KY+  E ILEEF+  RL+ Y  RKK  L     +  KL+N+ RFI 
Sbjct: 1101 TSNLVAFDSTGRIRKYEKVEDILEEFYVYRLDMYSARKKHWLGVYHSDYRKLKNQARFIQ 1160

Query: 1064 GVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGV 1123
             +++GE++V+ +++  L+ ELR + +  FPKN    +A      ++ + S+   + V G 
Sbjct: 1161 EIIDGELIVSKKRKPVLVQELRDRKYEAFPKNDGKKQATT--EEEDMDASDNEDDSVGG- 1217

Query: 1124 QSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL----DM 1179
             + DYDYLLS+ I +LTLE+++ L +   K   E D L   + + LW +DLD      + 
Sbjct: 1218 -AADYDYLLSLPIWSLTLERLERLNSAIMKKKGEHDALLARSEKDLWCQDLDEFAEEWEA 1276

Query: 1180 QLDELDKSDA---RAEEERMKIKGNGNG 1204
            QL+  DK  +   R    R +  G G G
Sbjct: 1277 QLEMDDKIQSKINRMGRRRSRKIGAGGG 1304


>gi|116194666|ref|XP_001223145.1| hypothetical protein CHGG_03931 [Chaetomium globosum CBS 148.51]
 gi|88179844|gb|EAQ87312.1| hypothetical protein CHGG_03931 [Chaetomium globosum CBS 148.51]
          Length = 1715

 Score = 1084 bits (2804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 615/1384 (44%), Positives = 845/1384 (61%), Gaps = 136/1384 (9%)

Query: 24   NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
            NKT  E YQK +QL+HI+ RPDTYIGS+E+  Q +W+Y +  K M +RT+ +VPGLYKIF
Sbjct: 110  NKTATETYQKLTQLQHIIKRPDTYIGSVERTDQKMWVYNKAEKLMENRTVGFVPGLYKIF 169

Query: 84   DEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            DEILVNAADN QRD  M  +KV +D+E   ISV N+G G+P+E+H++E  Y+PELIFGHL
Sbjct: 170  DEILVNAADNSQRDSSMTYLKVTVDRETGEISVENNGKGIPIEMHEKEKCYIPELIFGHL 229

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LT SNYDD+ KKT GGRNGYGAKLTNIFS +F IE  D K  K+YKQ +T NMGK  +  
Sbjct: 230  LTGSNYDDDEKKTVGGRNGYGAKLTNIFSQKFSIELQDSKNGKRYKQTWTENMGKMEKAK 289

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
            I+  K  D + KVSF PD  +F M   ++DD+  L+ +RV D+AG +   +KV LNG  +
Sbjct: 290  INSNKSAD-FVKVSFLPDYKRFGMEDGIDDDLEGLIYRRVYDMAGTVS-GIKVWLNGEHL 347

Query: 263  PVKSFAEYVDMYPKSVTR------------------FHERVNER-WEICVTLSEGQFQQV 303
             + +F  Y ++Y KS+                      +R N R W+I  T+S+G FQQV
Sbjct: 348  KI-NFKTYCELYAKSIANERGDVAVDGEKPVAKVEFDQQRHNGRLWQIGFTVSDGSFQQV 406

Query: 304  SFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPA 363
            SFVN IAT  GGTHV+Y+A+Q+ + +   + KK K  ++K  + +NH+++F+N LIDNPA
Sbjct: 407  SFVNNIATTSGGTHVNYIADQICDALAKELTKKKKGHSLKPSHFRNHIFIFINCLIDNPA 466

Query: 364  FDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKT 423
            F+SQTKE LT + S+FGSKC LS++FLKKV A   I   ++ +A+ K  K + K+DG K 
Sbjct: 467  FNSQTKEQLTTKMSAFGSKCVLSDQFLKKVKASEAIA-NIMEFADRKADKMMAKSDGNKR 525

Query: 424  EDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLN 483
              +    KL DAN AG R   +CTLILTEGDSA+ LA+AG +V+  DR GVFPLRGK+LN
Sbjct: 526  SRISN-DKLIDANWAGTRRGHECTLILTEGDSARGLAVAGRAVLDPDRIGVFPLRGKMLN 584

Query: 484  VREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFI 543
            VR+AS  Q++ N EI NIKK LGLK    Y + K LRYGHLMIM DQ             
Sbjct: 585  VRDASLEQIMKNKEIENIKKFLGLKHKQNYTDTKGLRYGHLMIMADQ------------- 631

Query: 544  LIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA-----T 598
                           D DGSHIKGLLINF+   +PSLL+I  F  EFITP+VK       
Sbjct: 632  ---------------DLDGSHIKGLLINFLEVQFPSLLRIDDFFQEFITPVVKVWQGSNP 676

Query: 599  NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFV 658
             K   + +F+++P YE WK+S   +   W  KY KGLG+S++++ + YF+++  H K F 
Sbjct: 677  KKPQNLKTFFNLPQYETWKDSHKSDLRRWKYKYLKGLGSSSNEDAQIYFKDLDRHLKKFD 736

Query: 659  WEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADL 718
                ++ +  ELAFSKKK +ARK+WL  F PG +LD       Y+DFV+KELILFSMAD 
Sbjct: 737  VLQPEESQLFELAFSKKKADARKEWLGNFVPGTYLDATAARKSYTDFVHKELILFSMADN 796

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
             RSIPSMVDGLKPGQRK+++ +FKRN + + KVA+ +GY+SE +AYHHGE SL  TI+G+
Sbjct: 797  MRSIPSMVDGLKPGQRKVIYGAFKRNLVNDQKVAELAGYISEVAAYHHGEVSLQQTIVGL 856

Query: 779  AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
            AQ +VGSNN+N L+P+G FG+R  GG DAASARYI TRLSP  R +F K D+  L+Y  +
Sbjct: 857  AQTYVGSNNVNCLEPSGNFGSRLSGGSDAASARYIHTRLSPFARRIFSKLDEPNLEYQFD 916

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG--------E 890
            DG  IEP  Y+PI+P VLVNG++GIGTGWS+ IPNY+P +IV N++R +          +
Sbjct: 917  DGNMIEPKVYVPILPMVLVNGADGIGTGWSTSIPNYHPIEIVDNLKRRMGRLDPEDSEEK 976

Query: 891  MMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIE--EVNETTLRIKELPIRRWTQDYRE 948
              +PM PW+RG+ G +E          Y   GII+  E N   + + ELPIR WT D++ 
Sbjct: 977  AFKPMTPWFRGWKGVLESDGPNR----YKFNGIIQQDEQNPNEIHVTELPIRMWTDDFKS 1032

Query: 949  FLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN 1006
             LE I+  ++  SFI+ +R+++D  TV F + + ++ M     EGLL+KFKL+ +++T+N
Sbjct: 1033 KLEDILRAEKTPSFIKDYREFNDHQTVHFIIDMEDKHMKAALDEGLLEKFKLSKSMTTTN 1092

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            +  F+++G I KY+ PE+I+EEF+H R   Y +RKK  L     +  KL+N+ RFIL ++
Sbjct: 1093 LVAFNTRGQIHKYENPEEIMEEFYHYRFNMYTERKKHWLGVYHADYRKLKNQYRFILEII 1152

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDET--EESEENPEVV 1120
              +++VN +K+  L+ ELR + +  FP    K SKS        TDE   ++  E+ +  
Sbjct: 1153 ENKLIVNKKKKDVLVQELRDRKYEAFPPKDDKKSKS--------TDEELGKDDAEDEDTS 1204

Query: 1121 NGVQSIDYDYLLSMAIGTLT---LEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            NG +  DYDYLLSM I +LT   LEK++  +A +   ++E+D L   + + LW+KDLD  
Sbjct: 1205 NGAR--DYDYLLSMPIWSLTNERLEKLKNQIAAKKAEHDELDAL---SEKDLWIKDLDEF 1259

Query: 1178 ------DMQLDELDKSDARAEEERMKIK-GNGNGDAGPKIVAKRAPKNARKNDKKSNNAR 1230
                   ++LD    +D R    R   K G G G   PK   + AP       +K   A+
Sbjct: 1260 VDEWHTQLKLDAEITADIRRMGRRTSRKIGAGRG-RRPKDDDEYAP-------EKKTKAK 1311

Query: 1231 ATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEP 1290
            A +         +    K +A     P   L DD+           A L ++ A+ K E 
Sbjct: 1312 APKVEKVETKTHQRFTEKFQAAANPKPKIDLSDDD----------FALLGKK-AAVKQES 1360

Query: 1291 SPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIII-----DDDEAFEIA 1345
             P  S + ET  V+        +KR AA K       SD  D+  +     D  +  E++
Sbjct: 1361 EPPAS-IPETANVR--------NKRAAATKPKSKYILSDGSDDDFMELGKADVKDESEVS 1411

Query: 1346 APEE 1349
             PEE
Sbjct: 1412 EPEE 1415


>gi|45191011|ref|NP_985265.1| AER410Wp [Ashbya gossypii ATCC 10895]
 gi|44984079|gb|AAS53089.1| AER410Wp [Ashbya gossypii ATCC 10895]
 gi|374108491|gb|AEY97398.1| FAER410Wp [Ashbya gossypii FDAG1]
          Length = 1427

 Score = 1083 bits (2802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1259 (45%), Positives = 804/1259 (63%), Gaps = 99/1259 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K   E YQK +QLEHIL RPDTYIGS+E     +W+++ E   M+ + ++ VPGL+KIFD
Sbjct: 9    KNASETYQKITQLEHILKRPDTYIGSVEMQDFHMWVHDAEMDCMVEKQVNIVPGLFKIFD 68

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EI+VNAADNK RDP M  ++VVI++E + I V N G+G+P+E+H +EG+Y+PELIFGHLL
Sbjct: 69   EIIVNAADNKVRDPSMKKIEVVINREENYIEVKNDGNGIPIEVHAKEGIYIPELIFGHLL 128

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDDN KK TGGRNGYGAKL NIFSTEFI+ET+D K  +KY Q + +NM     P I
Sbjct: 129  TSSNYDDNEKKVTGGRNGYGAKLCNIFSTEFILETSDPKSGQKYVQKWESNMNVCHPPKI 188

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
            +  K+G ++TK++FKPDL +F M  L+DD++ +M++RV D+ G + + V V LNG  + +
Sbjct: 189  TSYKKGPSYTKITFKPDLQRFGMEVLDDDILGVMRRRVYDINGSV-RDVNVSLNGKSLKI 247

Query: 265  KSFAEYVDMYPKSV----------------------TRFHERVNERWEICVTLSEGQFQQ 302
            ++F  Y+++Y +S+                      T  +E+VN+RWE+   +S+  FQQ
Sbjct: 248  RNFKSYMELYMRSLEKKRLIDSGMAPESASEKVNAPTILYEKVNDRWELGFAVSDISFQQ 307

Query: 303  VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNP 362
            +SFVN IAT  GGTHV+Y+ +Q+   V  +++KK K   VK   ++N++++F+N LI+NP
Sbjct: 308  ISFVNSIATTSGGTHVNYLTDQIVKKVSELLSKKKK--TVKPFQIRNNIFIFINCLIENP 365

Query: 363  AFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
            AF SQTKE LT R   FGSKCE+S +F+ K+  K+ +   +   A+   +K LK+ DGT+
Sbjct: 366  AFTSQTKEQLTTRVRDFGSKCEVSSDFINKI-MKTELATKIFEIADENAAKLLKQTDGTR 424

Query: 423  TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
               +    KLEDAN AG +   +CTL+LTEGDSA +LA+AGLSVVGRD +G FPL+GK+L
Sbjct: 425  KNRITDYPKLEDANKAGTKEGHKCTLVLTEGDSALSLAVAGLSVVGRDYYGCFPLKGKIL 484

Query: 483  NVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLL 540
            NVR+AS  Q+  N+EI  IKKI+GL+   +Y   ++K+LRYGH+MIMTD           
Sbjct: 485  NVRDASVEQIRKNTEIQAIKKIMGLQHKKQYTIEDMKTLRYGHVMIMTD----------- 533

Query: 541  WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT-- 598
                             QDHDGSHIKGLLINF  S +P LL IP FL+EFITPI+K T  
Sbjct: 534  -----------------QDHDGSHIKGLLINFFESTFPGLLDIPGFLIEFITPIMKVTIL 576

Query: 599  NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFV 658
                +V+ FY++PDYE W+++   +   W  KYYKGLGTS+ +E +EYF  + +H K F 
Sbjct: 577  KPKKQVIPFYNLPDYEKWRDT-ESHKYVWKTKYYKGLGTSSFQEAREYFSALDVHIKKFH 635

Query: 659  WEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADL 718
              +  D   I+LAFSKKK + RK+WL Q+EPG  LD     I+  DF+NKELILFS+AD 
Sbjct: 636  SLNPDDSSLIDLAFSKKKADDRKEWLRQYEPGTVLDPHLTEIQIGDFINKELILFSLADN 695

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIK-EAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
             RSIP ++DGLKP QRK++F SFKRN +K E KV + + YVS  +AYHH EQSL  TI+ 
Sbjct: 696  LRSIPHLLDGLKPSQRKVIFGSFKRNIMKTEIKVQELAAYVSGQTAYHHTEQSLVQTIVS 755

Query: 778  MAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLN 837
            +AQDFVG+NNI LL P G FGTR  GGKDAA+ARYIFT+L+ I++ +F   D+ LL Y+ 
Sbjct: 756  LAQDFVGANNIYLLMPRGAFGTRATGGKDAAAARYIFTQLNSISKHVFNPLDNPLLTYVQ 815

Query: 838  EDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHP 897
            +D + +EP WY+P +P VLVNG+EGIGTGWS+ IP +NP DIV N+R+L+ G+  + M P
Sbjct: 816  DDEKTVEPEWYVPALPMVLVNGAEGIGTGWSTSIPPFNPIDIVNNLRKLMRGDEPDDMAP 875

Query: 898  WYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN 957
            W+RG+ GT++K  ++     Y + G IE+V E T+ I ELP R WT   +E L   +  N
Sbjct: 876  WFRGWNGTMQKIDAQR----YRIFGRIEQVGENTVEITELPARTWTTTIKEHLLLALSGN 931

Query: 958  D---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
            +    +++   Q     T+ F V L+ E M RT++ G  ++FKL +T+S SNM LFD+  
Sbjct: 932  ERTKPWVKDM-QEQHGATIKFVVTLTPEEMERTRKIGFYERFKLISTVSLSNMVLFDAHN 990

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             IKKY+  ++IL +FF++RLEFY+KRK   +E L+ +L KL  +V+FI  +++ E+ V  
Sbjct: 991  KIKKYNDVKEILTDFFYVRLEFYQKRKDYMIERLQWQLEKLSFQVKFIKMIIDEELRVTK 1050

Query: 1075 RKRTDLLLELRQKGF--------TPFPKNSKSIEAVVAGATDETEESEENPE-------- 1118
            + R+ L+ EL   GF          F K  + +E +   A+D  E +EE  E        
Sbjct: 1051 KARSVLMKELESLGFPRVDAEGKPHFEKIDEDLEEM--DASDPEEFAEELDEQGGEVADE 1108

Query: 1119 --VVNGVQSI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
              VV  ++    Y+YLL M I +LT EK + LL ++     E+ +L   + + LW  DLD
Sbjct: 1109 NVVVGPLEKFGTYEYLLGMKIWSLTKEKYERLLREKQNKEAELQELLGKSAKDLWNADLD 1168

Query: 1176 ALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEA 1234
                + +E  K D    +  ++         G K+  K   K A K+D   N ++   A
Sbjct: 1169 MFVREYEEFIKYDTEVRDGTIRA-------VGSKVKGK---KRAHKDDDDYNPSKKKPA 1217


>gi|401425172|ref|XP_003877071.1| DNA topoisomerase ii [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|322493315|emb|CBZ28601.1| DNA topoisomerase ii [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 1497

 Score = 1083 bits (2802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/1216 (46%), Positives = 781/1216 (64%), Gaps = 81/1216 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+E++YQKK+Q +HIL RPD YIG+IE  T  +W+Y++    M     ++ PGLYKIFD
Sbjct: 3    KTVEQIYQKKTQHDHILTRPDMYIGTIEPVTDDIWVYDDAENIMKQHKCTWTPGLYKIFD 62

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP    V  V   E + + V+N+G+G+P++ H+E  ++VPE+IFGHLL
Sbjct: 63   EILVNAADNKVRDPIGQTVIRVWMTE-NYVRVYNNGEGIPIQKHREHDLWVPEMIFGHLL 121

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD   K TGGRNG+GAKLTN+FS +F +ET   +  KK+   +TNNM +  +P I
Sbjct: 122  TSSNYDDEEAKVTGGRNGFGAKLTNVFSKQFEVETVHSRSRKKFYMKWTNNMLQHDDPII 181

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
              C   D +T V+F PD A+F++    +D++ +MK+RV D+AGC  K++K  LN  R+  
Sbjct: 182  VSCDSAD-YTMVTFYPDFARFHVDKFSEDMLLMMKRRVYDVAGCTDKTLKCFLNDERIAC 240

Query: 265  KSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDY 320
             +F EYVD+YP    +     + RVN+RWE+CV +S    QQVSFVN IAT +GGTHV Y
Sbjct: 241  TTFPEYVDLYPTMGEERKAASYSRVNDRWEVCVRVSNIGPQQVSFVNSIATTRGGTHVKY 300

Query: 321  VANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFG 380
            + +Q+ + V+    KK K  +VK H ++ H+++FVN LI+NP FDSQTKETL   +S FG
Sbjct: 301  IMDQIISKVVEQAKKKKKT-DVKPHMIRPHIFLFVNCLIENPGFDSQTKETLNTVKSKFG 359

Query: 381  SKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAG 439
            S C+L    +  + + SGIVE  +  AN K +K++  K   +  + + GI KL+DAN AG
Sbjct: 360  STCDLPNSIIDYIMS-SGIVERSVEMANSKIAKEMASKMRSSDRKQIMGIPKLDDANEAG 418

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
            G+ S +CTLILTEGDSAK L  AGL+V  RD FGVFPLRGK LNVREAS  ++    EI 
Sbjct: 419  GKYSHRCTLILTEGDSAKTLCTAGLAVKDRDYFGVFPLRGKPLNVREASLKKLAACEEIQ 478

Query: 500  NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
             + KI+GL    +Y N   LRYGHLMIM+DQ                            D
Sbjct: 479  CVMKIMGLDIRQKYENTDGLRYGHLMIMSDQ----------------------------D 510

Query: 560  HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFYSMPDYEA 615
            HDGSHIKGLLINFIH FWPSLL++P FL EFITPIVKA  K     GK +SF+SMPDY  
Sbjct: 511  HDGSHIKGLLINFIHCFWPSLLRVPGFLQEFITPIVKARPKGRGGAGKAISFFSMPDYFE 570

Query: 616  WKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKK 675
            WK+++G N S++ I+YYKGLGTS ++EG+EYF+NI  H+  FV ++  + + I +AF K 
Sbjct: 571  WKKAIGDNLSNYQIRYYKGLGTSGAEEGREYFENIDRHRLSFVEQEQSEEDRIVMAFGKD 630

Query: 676  KIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDGLKP 731
            ++E RK+W+  F+   ++++   Y    + Y DFV+KELILFS+AD +RSIPS++DG KP
Sbjct: 631  RVEDRKEWITNFKTNVNVNESMDYNVRQVSYRDFVDKELILFSIADCERSIPSVIDGFKP 690

Query: 732  GQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLL 791
            GQRKILF  FKRN +   KV Q +GYVSEHSAYHHGEQSL  TI+GMAQDFVGSNN+ LL
Sbjct: 691  GQRKILFSCFKRNLVNSIKVVQLAGYVSEHSAYHHGEQSLVQTIVGMAQDFVGSNNVPLL 750

Query: 792  QPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPI 851
            + +GQFGTR  GGKD A+ RYIFTRL  + R +F   DD +++Y ++DG  +EP +Y+P+
Sbjct: 751  RKDGQFGTRLHGGKDHAAGRYIFTRLMQVARAIFHPADDFVVEYKDDDGLSVEPFFYIPV 810

Query: 852  IPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTAS 911
            IP VLVNG+ GIGTG+S+ IPNYNP +I++N+ RL+ GE +  M PWY GF GT+E+   
Sbjct: 811  IPMVLVNGTTGIGTGFSTSIPNYNPLEIISNLERLMQGEEVHKMQPWYFGFTGTMEE--- 867

Query: 912  KEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDT 971
            KE G  +   G  E   +  + I ELPI  WTQ Y++FLE +  +    +  +R+++ D 
Sbjct: 868  KEPG-KFVSHGRYEIRPDGVVCITELPIGVWTQTYKKFLEDM--REKELVVQYREHTTDV 924

Query: 972  TVDFEVFLSEESMMR-TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            TVDFEVFL  + + +   Q+ + ++ +L   +  +N+  F+ +G I KY   E +L+EF+
Sbjct: 925  TVDFEVFLHPQVLEQWVAQDVVEERLQLKEYVHATNIIAFNKEGQITKYSDAESVLKEFY 984

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +RL++Y KRK+  L  L     KLEN VRF+  VV G +VV  RK+ +LL +L+++ + 
Sbjct: 985  LVRLDYYAKRKQYLLGELRRLTSKLENMVRFVREVVEGTLVVTKRKKKELLEDLQRRMYL 1044

Query: 1091 PFPKNSK------SIEAVVAGATDETEESE-------------------ENPEVVNGVQS 1125
            PFP ++K      ++E     A  +T+ SE                   E PEV    + 
Sbjct: 1045 PFPPHTKKKLSSTTVEEGDGEAAPDTQNSEDDVLGMGRAADGEADDGAAEPPEVRRATR- 1103

Query: 1126 IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL- 1184
             DYDYLL M + +LT E +  L A   K   +   +   TP+  W++DL  L  +L+   
Sbjct: 1104 -DYDYLLGMKLWSLTAEMIARLEAQMAKARRDTATMEARTPKETWMEDLKVLRTRLESFY 1162

Query: 1185 -DKSDARAEEERMKIK 1199
             D+    A  +R K+K
Sbjct: 1163 ADREVEIATIQRKKVK 1178


>gi|398018328|ref|XP_003862343.1| DNA topoisomerase ii [Leishmania donovani]
 gi|322500572|emb|CBZ35649.1| DNA topoisomerase ii [Leishmania donovani]
          Length = 1498

 Score = 1082 bits (2799), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/1216 (46%), Positives = 784/1216 (64%), Gaps = 81/1216 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+E++YQKK+Q +HIL RPD YIG+IE  T  +W+Y++   TM  R  ++ PGLYKIFD
Sbjct: 3    KTVEQIYQKKTQHDHILTRPDMYIGTIEPVTDDIWVYDDAENTMKQRKCTWTPGLYKIFD 62

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP    V  V   E + + V+N+G+G+P++ H+E  ++VPE+IFGHLL
Sbjct: 63   EILVNAADNKVRDPIGQTVIRVWMTE-NYVRVYNNGEGIPIQKHREHDLWVPEMIFGHLL 121

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD   K TGGRNG+GAKLTN+FS +F +ET   +  KK+   + NNM +  +P I
Sbjct: 122  TSSNYDDEEAKVTGGRNGFGAKLTNVFSKQFEVETVHSRSRKKFYMKWANNMLQHDDPVI 181

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
              C   D +T V+F PD A F++    +D++ +MK+RV D+AGC  K++K  LN  R+  
Sbjct: 182  VPCDSAD-YTMVTFYPDFALFHVDKFSEDMLLMMKRRVYDVAGCTDKTLKCFLNDERIAC 240

Query: 265  KSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDY 320
             +F EYVD+YP    +     + RVN+RWE+CV +S    QQVSFVN IAT +GGTHV Y
Sbjct: 241  TTFPEYVDLYPTMGEERKAASYSRVNDRWEVCVRVSNIGPQQVSFVNSIATTRGGTHVKY 300

Query: 321  VANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFG 380
            + +Q+ + V+    KK K  +VK H ++ H+++FVN LI+NP FDSQTKETL   +S FG
Sbjct: 301  IMDQIISKVVEQAKKKKKT-DVKPHMIRPHIFLFVNCLIENPGFDSQTKETLNTVKSKFG 359

Query: 381  SKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAG 439
            S C+L    +  + + SGIVE  +  AN K ++++  K   +  + + GI KL+DAN AG
Sbjct: 360  STCDLPNSIVDYIMS-SGIVERSVEMANSKIAREMASKMRSSDRKQIMGIPKLDDANEAG 418

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
            G++S +CTLILTEGDSAK L  AGL+V  RD FGVFPLRGK LNVREAS  ++    EI 
Sbjct: 419  GKHSHRCTLILTEGDSAKTLCTAGLAVKDRDYFGVFPLRGKPLNVREASLKKLAACEEIQ 478

Query: 500  NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
             + KI+GL    +Y N   LRYGHLMIM+DQ                            D
Sbjct: 479  CVMKIMGLDIRQKYENADGLRYGHLMIMSDQ----------------------------D 510

Query: 560  HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFYSMPDYEA 615
            HDGSHIKGLLINFIH FWP+LL++P FL +FITPIVKA  K     GK +SF+SMPDY  
Sbjct: 511  HDGSHIKGLLINFIHCFWPNLLRVPGFLQQFITPIVKARPKGRGGAGKAISFFSMPDYFE 570

Query: 616  WKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKK 675
            WK+++G N S++ I+YYKGLGTS ++EG+EYF+NI  H+ +FV ++  + + I +AF K 
Sbjct: 571  WKKAIGDNLSNYQIRYYKGLGTSGAEEGREYFENIDRHRLNFVEQEQSEEDRIVMAFGKD 630

Query: 676  KIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDGLKP 731
            ++E RK+W+  F+   ++++   Y    + Y DFV+KELILFS+AD +RSIPS++DG KP
Sbjct: 631  RVEDRKEWITNFKTNVNVNESMDYNVRQVSYRDFVDKELILFSIADCERSIPSVIDGFKP 690

Query: 732  GQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLL 791
            GQRKILF  FKRN +   KV Q +GYVSEHSAYHHGEQSL  TI+GMAQDFVGSNN+ LL
Sbjct: 691  GQRKILFSCFKRNLVNSIKVVQLAGYVSEHSAYHHGEQSLVQTIVGMAQDFVGSNNVPLL 750

Query: 792  QPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPI 851
            + +GQFGTR  GGKD A+ RYIFTRL  ++R +F   DD +++Y ++DG  +EP +Y+P+
Sbjct: 751  RKDGQFGTRLHGGKDHAAGRYIFTRLMQVSRAIFHPADDFVVEYKDDDGLSVEPFFYIPV 810

Query: 852  IPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTAS 911
            IP VLVNG+ GIGTG+S+ IPNYNP +I++N+ RL+ GE +  M PWY GF GT+E+   
Sbjct: 811  IPMVLVNGTTGIGTGFSTSIPNYNPLEIISNLERLMRGEEVHKMQPWYFGFTGTMEE--- 867

Query: 912  KEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDT 971
            KE G  +   G  E   +  + I ELPI  WTQ Y++FLE +  +    +  +R+++ D 
Sbjct: 868  KEPG-KFVSHGRYEIRPDGVVCITELPIGVWTQAYKKFLEDM--REKELVVQYREHTTDV 924

Query: 972  TVDFEVFLSEESMMR-TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            TVDFEVFL  + + +   Q+ + ++ +L   +  +N+  F+ +G I KY   E +L+EF+
Sbjct: 925  TVDFEVFLHPQVLEQWVSQDVVEERLQLKEYVHATNIIAFNKEGQITKYSDAESVLKEFY 984

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +RL++Y KRK+  L  L     KLEN VRF+  VV G +VV  RK+ +LL +L+++ + 
Sbjct: 985  LVRLDYYAKRKQYLLGELRRLTSKLENMVRFVREVVEGTLVVTKRKKKELLEDLQRRMYL 1044

Query: 1091 PFPKNSK------SIEAVVAGATDETEESEEN-------------------PEVVNGVQS 1125
            PFP  +K      ++E        + + SEE+                   PEV    + 
Sbjct: 1045 PFPPYTKKKLSSTTVEEGDGEGAPDAQNSEEDVLGMGNAADGGADDGAAEPPEVRRATR- 1103

Query: 1126 IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL- 1184
             DYDYLL M + +LT E +  L A  D+   +   +   TP+ +W++DL  L  +L+   
Sbjct: 1104 -DYDYLLGMKLWSLTAEMIARLEAQMDRARRDTATMEARTPKDMWMEDLKVLRTKLESFY 1162

Query: 1185 -DKSDARAEEERMKIK 1199
             D+    A  +R K+K
Sbjct: 1163 ADREVEIATIQRKKVK 1178


>gi|294657090|ref|XP_459406.2| DEHA2E01738p [Debaryomyces hansenii CBS767]
 gi|199432439|emb|CAG87617.2| DEHA2E01738p [Debaryomyces hansenii CBS767]
          Length = 1411

 Score = 1081 bits (2796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 566/1229 (46%), Positives = 795/1229 (64%), Gaps = 100/1229 (8%)

Query: 6    RLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES 65
            + PL+ S N   V     +    + YQK SQLEHIL RPDTYIGS+E+    +W ++  +
Sbjct: 21   KTPLSDSTNTPKVS-NGKSSNASDQYQKLSQLEHILKRPDTYIGSVERSPIEMWCFDPIA 79

Query: 66   KTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPV 125
            ++M+++ ++ VPGLYKIFDEILVNAADNK +DP M  +KV ID E++LI V N G G+PV
Sbjct: 80   ESMVYKEVNIVPGLYKIFDEILVNAADNKIKDPSMKNIKVKIDPENNLIEVMNDGKGIPV 139

Query: 126  EIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRL 185
            EIH +E +Y+PELIFG+LLTSSNYDD+ KK TGGRNG+GAKL NIFSTEFI+ETAD    
Sbjct: 140  EIHDKEKIYIPELIFGNLLTSSNYDDDEKKVTGGRNGFGAKLCNIFSTEFILETADLNTG 199

Query: 186  KKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDL 245
              YKQ +TNNM   S+P I+K K    +TKV+FKPDL+KF MT L+++ ++++ +RV DL
Sbjct: 200  FLYKQTWTNNMSNISKPKITKLKSKREYTKVTFKPDLSKFGMTSLDEETLSVLTRRVYDL 259

Query: 246  AGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV------------------TRFHERVNE 287
             G +  +  + LN  ++ +++F  YV+MY K++                  T  HE  N+
Sbjct: 260  CGTVN-NCNIYLNDKKLNIRNFKAYVEMYVKAIKERNPDPEPMDGTIQNYTTIVHEVFND 318

Query: 288  RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VKA 344
            RWE+   +S+G F QVSFVN IAT  GGTHV +V++Q+   ++A + KK K      +K 
Sbjct: 319  RWEVAFAVSDGSFNQVSFVNSIATTAGGTHVKHVSDQIITKLIATLAKKEKGKKKLMIKT 378

Query: 345  HNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS----KCELSEEFLKKVTAKSGIV 400
              VKN++++FVN LI+NPAF SQTKE LT + S FG     K  +SE+F+ K+  K+ IV
Sbjct: 379  QEVKNNMFLFVNCLIENPAFTSQTKEQLTTKVSQFGGKPSEKIAISEQFINKI-LKTSIV 437

Query: 401  ETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALA 460
            + + S AN  + K L+K DG++   ++G  KL DAN AG +   +CTLILTEGDSA +LA
Sbjct: 438  DKIRSIANANEDKALQKVDGSRKSRIKGQVKLVDANRAGTKEGHKCTLILTEGDSALSLA 497

Query: 461  MAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKS 518
            +AGL+VVGR+ +G FPLRGKLLNVREAS++QV  N EI  +K+I+GL+    Y+  N+ +
Sbjct: 498  VAGLAVVGRNYYGCFPLRGKLLNVREASTDQVSKNVEINALKQIIGLQHKKHYSLENINT 557

Query: 519  LRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWP 578
            LRYGH+MIMTD                            QD DGSHIKGL+INF+ + +P
Sbjct: 558  LRYGHIMIMTD----------------------------QDQDGSHIKGLIINFLETSFP 589

Query: 579  SLLKIPSFLVEFITPIVKAT-NKNG---KVLSFYSMPDYEAWKESLGGNASSWSIKYYKG 634
             LL++P FL+EFITPIVK T N+ G   +V+ FY+MP++E W+++  G    W+ KYYKG
Sbjct: 590  GLLQVPGFLLEFITPIVKVTVNRRGSGKQVIPFYTMPEFEKWRDT-EGLTCRWTQKYYKG 648

Query: 635  LGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLD 694
            LGTST  EG+EYF  +  H K F      D + I+LAFSKKK + RK+WL  FEPG HLD
Sbjct: 649  LGTSTDAEGREYFSALDKHLKTFHALQGDDQQLIDLAFSKKKADDRKEWLQGFEPGTHLD 708

Query: 695  QKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQF 754
               + I  SDF+NKELILFSMAD  RSIPS++DG KPGQRK+L+  FKRN   E KV Q 
Sbjct: 709  PDLEEIPISDFINKELILFSMADNVRSIPSVLDGFKPGQRKVLYGCFKRNLKSEIKVNQL 768

Query: 755  SGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIF 814
            +GYVSE++ YHHGEQSL  TI+G+AQDF+GSNN+N+L+PNG FG+R  GGKD ++ RYIF
Sbjct: 769  AGYVSENTGYHHGEQSLVQTIIGLAQDFIGSNNLNILKPNGSFGSRAAGGKDFSAPRYIF 828

Query: 815  TRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNY 874
            T ++ ITR +F   D+ L  Y+ +D Q +EP WY+P++P +LVNGSEGIGTGWS+ +P +
Sbjct: 829  TEINEITRKIFNPLDNALYKYVQDDEQTVEPEWYLPVLPMLLVNGSEGIGTGWSTNVPPF 888

Query: 875  NPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRI 934
            NP DIV N+++L+NGE M  M PWYRG+ G I           + V G IE+ +ET + I
Sbjct: 889  NPTDIVNNIKKLMNGEEMNEMSPWYRGWEGEIVANGKDR----FRVIGRIEQTDETEVEI 944

Query: 935  KELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGL 992
             E+P++ WT + +EFL + +  ++   +I+   +      + F V LS + M ++ + GL
Sbjct: 945  TEIPVKTWTNNMKEFLLNGLGTEKVKPWIKDMEE-QHGMNIRFVVKLSADEMAKSLKVGL 1003

Query: 993  LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
            L++F L +++S +NM  FD  G IKKY++P +I+ +F+++RLE+Y++RK    + ++ +L
Sbjct: 1004 LERFNLISSVSLTNMVAFDPMGKIKKYESPLEIMRDFYYVRLEYYQRRKDHITDEMQHQL 1063

Query: 1053 LKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSK--------------- 1097
             KL  + RFI  +++ E+ ++N+KR+ L+  L++  F  F KNSK               
Sbjct: 1064 TKLSEQARFIKLIIDKELSISNKKRSVLVDILQKFKFVKFDKNSKPVNDSKDPALFVNAD 1123

Query: 1098 -----------SIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQG 1146
                        I  + AG     + +E  PE +       YDYLL M I +LT E+ + 
Sbjct: 1124 ELVEEEEEEVGDISQINAGGIPNEDNNEHKPETIYS----HYDYLLGMTIWSLTRERYEK 1179

Query: 1147 LLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            LL  +     E++ L   + + LW +DLD
Sbjct: 1180 LLKQKGDKESELNILLSKSAKDLWNEDLD 1208


>gi|157871926|ref|XP_001684512.1| DNA topoisomerase ii [Leishmania major strain Friedlin]
 gi|68127581|emb|CAJ05684.1| DNA topoisomerase ii [Leishmania major strain Friedlin]
          Length = 1497

 Score = 1078 bits (2788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/1214 (46%), Positives = 782/1214 (64%), Gaps = 77/1214 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+E++YQKK+Q +HIL RPD YIG++E  T  +W+Y++   +M  R  ++ PGLYKIFD
Sbjct: 3    KTVEQIYQKKTQHDHILTRPDMYIGTLEPVTDDIWVYDDAENSMKQRKCTWTPGLYKIFD 62

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP    V  V   E   + V+N+G+G+P++ H+E  ++VPE+IFGHLL
Sbjct: 63   EILVNAADNKVRDPIGQTVIRVWMTE-SYVRVYNNGEGIPIQKHREHDLWVPEMIFGHLL 121

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD   K TGGRNG+GAKLTN+FS +F +ET   +  KK+   +TNNM +  +P I
Sbjct: 122  TSSNYDDEEAKVTGGRNGFGAKLTNVFSKQFEVETVHSRSRKKFYMKWTNNMLQHDDPVI 181

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
              C   D +T V+F PD A F++    +D++ +MK+RV D+AGC  K++K  LN  R+  
Sbjct: 182  VPCDSAD-YTMVTFYPDFALFHVDKFTEDMLLMMKRRVYDIAGCTDKTLKCFLNDERIAC 240

Query: 265  KSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDY 320
             +F EYVD+YP    +     + RVN+RWE+CV +S    QQVSFVN IAT +GGTHV Y
Sbjct: 241  TTFPEYVDLYPTMGEERKAASYSRVNDRWEVCVRVSNIGPQQVSFVNSIATTRGGTHVKY 300

Query: 321  VANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFG 380
            + +Q+ + VM    KK K  +VK H ++ H+++FVN LI+NP FDSQTKETL   +S FG
Sbjct: 301  IMDQITSKVMEQAKKKKKT-DVKPHMIRPHIFLFVNCLIENPGFDSQTKETLNTVKSKFG 359

Query: 381  SKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAG 439
            S C+L    +  + + SGIVE  +  AN K ++++  K   +  + + GI KL+DAN AG
Sbjct: 360  STCDLPNSIVDYIMS-SGIVERSVEMANSKIAREMASKMRSSDRKQIMGIPKLDDANEAG 418

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
            G++S +CTLILTEGDSAK L  AGL+V  RD FGVFPLRGK LNVREAS  ++    EI 
Sbjct: 419  GKHSHRCTLILTEGDSAKTLCTAGLAVKDRDYFGVFPLRGKPLNVREASLKKLAACEEIQ 478

Query: 500  NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
             + KI+GL     Y N   LRYGHLMIM+DQ                            D
Sbjct: 479  CVMKIMGLDIRQTYENSDGLRYGHLMIMSDQ----------------------------D 510

Query: 560  HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFYSMPDYEA 615
            HDGSHIKGLLINFIH FWP+LL++P FL +FITPIVKA  K     GK +SF+SMPDY  
Sbjct: 511  HDGSHIKGLLINFIHCFWPNLLRVPGFLQQFITPIVKARPKGRGGAGKAISFFSMPDYFE 570

Query: 616  WKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKK 675
            WK+++G N S++ I+YYKGLGTS ++EG+EYF+NI  H+ +FV ++  + + I +AF K 
Sbjct: 571  WKKAIGDNLSNYQIRYYKGLGTSGAEEGREYFENIDRHRLNFVEQEQSEEDRIVMAFGKD 630

Query: 676  KIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDGLKP 731
            ++E RK+W+  F+   ++++   Y    + Y DFV+KELILFS+AD +RSIPS++DG KP
Sbjct: 631  RVEDRKEWITNFKTNVNVNESMDYNVRQVSYRDFVDKELILFSIADCERSIPSVIDGFKP 690

Query: 732  GQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLL 791
            GQRKILF  FKRN +   KV Q +GYVSEHSAYHHGEQSL  TI+GMAQDFVGSNN+ LL
Sbjct: 691  GQRKILFSCFKRNLVNSIKVVQLAGYVSEHSAYHHGEQSLVQTIVGMAQDFVGSNNVPLL 750

Query: 792  QPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPI 851
            + +GQFGTR  GGKD A+ RYIFTRL  + R +F   DD +++Y ++DG  +EP +Y+P+
Sbjct: 751  RKDGQFGTRLHGGKDHAAGRYIFTRLMQVARAIFHPADDFVVEYKDDDGLSVEPFFYIPV 810

Query: 852  IPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTAS 911
            IP VLVNG+ GIGTG+S+ IPNYNP +I++N+ RL+ GE +  M PWY GF GT+E+   
Sbjct: 811  IPMVLVNGTTGIGTGFSTSIPNYNPLEIISNLERLMRGEEVHKMQPWYFGFTGTMEE--- 867

Query: 912  KEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDT 971
            KE G  +   G  E   +  + I ELPI  WTQ Y++FLE +  +    +  +R+++ D 
Sbjct: 868  KEPG-KFISHGRYEIRPDGVVCITELPIGVWTQAYKKFLEDM--REKELVVQYREHTTDV 924

Query: 972  TVDFEVFLSEESMMR-TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            TVDFEVFL  + + +   Q+ + ++ +L   +  +N+  F+ +G I KY   E +L+EF+
Sbjct: 925  TVDFEVFLHPQVLEQWVAQDVVEERLQLKEYVHATNIIAFNKEGQITKYSDAESVLKEFY 984

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +RL++Y KRK+  L  L     KLEN VRF+  VV G +VV  RK+ +LL +L+++ + 
Sbjct: 985  LVRLDYYAKRKQYLLGELRRLTSKLENMVRFVREVVEGTLVVTKRKKKELLEDLQRRMYL 1044

Query: 1091 PFPKNSK---SIEAVVAGATDETEESEENPEVVNGV--------------------QSID 1127
            PFP ++K   S   V  G  +   +++ + E V GV                     + D
Sbjct: 1045 PFPPHTKKKLSSTTVEEGDDEGAPDAQNSEEDVLGVGNAADSGADDGAAEPPEMRRATRD 1104

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL--D 1185
            YDYLL M + +LT E +  L A   +   +   +   TP+ +W++DL  L  +L+    D
Sbjct: 1105 YDYLLGMKLWSLTAEMIARLEAQMARARRDTAAMEARTPKDMWMEDLKVLRTKLESFYAD 1164

Query: 1186 KSDARAEEERMKIK 1199
            +    A  +R K+K
Sbjct: 1165 REVEIATIQRKKVK 1178


>gi|317419224|emb|CBN81261.1| DNA topoisomerase 2-alpha, partial [Dicentrarchus labrax]
          Length = 968

 Score = 1078 bits (2787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 552/988 (55%), Positives = 704/988 (71%), Gaps = 68/988 (6%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPD+YIGS+E  TQ +W+Y+E+   +  R +++VPGLYKIFDE
Sbjct: 16  SVERIYQKKTQLEHILLRPDSYIGSVEPVTQQMWVYDEDV-GLNCRDVTFVPGLYKIFDE 74

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRD KM  +K+ ID E++ ISV N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 75  ILVNAADNKQRDNKMSCIKISIDVENNTISVWNNGKGIPVVEHKVEKVYVPALIFGQLLT 134

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  + NI 
Sbjct: 135 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKESKKVFKQTWYDNMGRTGDSNI- 193

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
           K   G+ +T ++F+PDL KF M+ L+ D VALM +R  D+AG + K V+VE NG R+P+ 
Sbjct: 194 KSFNGEEYTCITFRPDLPKFKMSTLDKDTVALMTRRAYDIAG-VSKGVRVEFNGKRLPIA 252

Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            F  YVDMY K        S+T  HE VN RWE+C+T+SE  FQQVSFVN IAT KGG H
Sbjct: 253 GFRSYVDMYLKDKVDEVGNSLTVVHEIVNNRWEVCLTMSEKGFQQVSFVNSIATTKGGRH 312

Query: 318 VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
           +DYVA+QV   ++ VV KKNK    VK   VKNH+W+FVN LI+NP FDSQTKE +TL+Q
Sbjct: 313 IDYVADQVVGKLIEVVKKKNKAGVAVKPFQVKNHMWLFVNCLIENPTFDSQTKENMTLQQ 372

Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFK-QSKDLKKNDGTKTEDVRGISKLEDA 435
            +FGS C L ++F+K+ T+  GIVE++++W  FK QS+  KK    K   ++G+ KL+DA
Sbjct: 373 KNFGSTCPLGDKFIKQATS-CGIVESIMNWVKFKAQSQLNKKCSAVKHTKIKGVPKLDDA 431

Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
           N AGG+NS  CTLILTEGDSAK LA++GL VVGRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 432 NDAGGKNSISCTLILTEGDSAKTLAVSGLGVVGRDRYGVFPLRGKMLNVREASLKQIMEN 491

Query: 496 SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
           +EI NI KILGL+    Y++   +KSLRYG +MIMTDQ                      
Sbjct: 492 AEINNIIKILGLQYKKNYSDPESLKSLRYGKIMIMTDQ---------------------- 529

Query: 553 CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                 D DGSHIKGLLINFIH  WPSLL+  +FL EFITPI+K ++K  + LSFYS+P+
Sbjct: 530 ------DQDGSHIKGLLINFIHHNWPSLLR-HNFLEEFITPIIKVSHKKTQ-LSFYSIPE 581

Query: 613 YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
           + +WK+S   N  SW IKYYKGLGTSTS+E KEYF ++  H+  F +   +D EAI LAF
Sbjct: 582 FNSWKDS-QPNHKSWKIKYYKGLGTSTSQEAKEYFSDMQRHRIPFKYAGPEDDEAITLAF 640

Query: 673 SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
           SKKK+E RK+WL  F            P ++L  Q  K + Y+DFVNKEL+LFS +D +R
Sbjct: 641 SKKKVEERKEWLTNFMVNRRQRREHNLPEDYLYGQATKSLSYNDFVNKELVLFSNSDNER 700

Query: 721 SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
           SIP +VDGLKPGQRK+LFC FKRN  +E KVAQ +G V+E SAYHHGE SL  TI+G+AQ
Sbjct: 701 SIPCLVDGLKPGQRKVLFCCFKRNDKREVKVAQLAGSVAEMSAYHHGEVSLMMTIVGLAQ 760

Query: 781 DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
           +FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R +FP  DD LL Y  +D 
Sbjct: 761 NFVGSNNMNLLQPLGQFGTRLHGGKDSASPRYIFTMLSPLARLVFPSVDDNLLKYNYDDN 820

Query: 841 QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
           Q++EP WYMPIIPTVLVNG+EGIGTGW+S IPNYN R+IV+N+ R+LNG+   PM P Y+
Sbjct: 821 QRVEPEWYMPIIPTVLVNGAEGIGTGWASKIPNYNIREIVSNIHRMLNGDEPLPMLPNYK 880

Query: 901 GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQND- 958
           GF GTIE     +    +  +G +  ++ TT+ I ELP++ WTQ Y+E  LE +++  + 
Sbjct: 881 GFRGTIEHVMDNQ----FMNSGEVAIIDSTTIEISELPVKSWTQTYKENVLEPMLNGTEK 936

Query: 959 --SFIRGFRQYSDDTTVDFEVFLSEESM 984
             S I  FR+Y  DTTV F + ++EE +
Sbjct: 937 VPSLITDFREYHTDTTVRFVIKMTEEKL 964


>gi|339898748|ref|XP_001470271.2| DNA topoisomerase ii [Leishmania infantum JPCM5]
 gi|321398489|emb|CAM69466.2| DNA topoisomerase ii, partial [Leishmania infantum JPCM5]
          Length = 1252

 Score = 1077 bits (2786), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/1216 (46%), Positives = 784/1216 (64%), Gaps = 81/1216 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+E++YQKK+Q +HIL RPD YIG+IE  T  +W+Y++   TM  R  ++ PGLYKIFD
Sbjct: 3    KTVEQIYQKKTQHDHILTRPDMYIGTIEPVTDDIWVYDDAENTMKQRKCTWTPGLYKIFD 62

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP    V  V   E + + V+N+G+G+P++ H+E  ++VPE+IFGHLL
Sbjct: 63   EILVNAADNKVRDPIGQTVIRVWMTE-NYVRVYNNGEGIPIQKHREHDLWVPEMIFGHLL 121

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD   K TGGRNG+GAKLTN+FS +F +ET   +  KK+   + NNM +  +P I
Sbjct: 122  TSSNYDDEEAKVTGGRNGFGAKLTNVFSKQFEVETVHSRSRKKFYMKWANNMLQHDDPVI 181

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
              C   D +T V+F PD A F++    +D++ +MK+RV D+AGC  K++K  LN  R+  
Sbjct: 182  VPCDSAD-YTMVTFYPDFALFHVDKFSEDMLLMMKRRVYDVAGCTDKTLKCFLNDERIAC 240

Query: 265  KSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDY 320
             +F EYVD+YP    +     + RVN+RWE+CV +S    QQVSFVN IAT +GGTHV Y
Sbjct: 241  TTFPEYVDLYPTMGEERKAASYSRVNDRWEVCVRVSNIGPQQVSFVNSIATTRGGTHVKY 300

Query: 321  VANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFG 380
            + +Q+ + V+    KK K  +VK H ++ H+++FVN LI+NP FDSQTKETL   +S FG
Sbjct: 301  IMDQIISKVVEQAKKKKK-TDVKPHMIRPHIFLFVNCLIENPGFDSQTKETLNTVKSKFG 359

Query: 381  SKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAG 439
            S C+L    +  + + SGIVE  +  AN K ++++  K   +  + + GI KL+DAN AG
Sbjct: 360  STCDLPNSIVDYIMS-SGIVERSVEMANSKIAREMASKMRSSDRKQIMGIPKLDDANEAG 418

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
            G++S +CTLILTEGDSAK L  AGL+V  RD FGVFPLRGK LNVREAS  ++    EI 
Sbjct: 419  GKHSHRCTLILTEGDSAKTLCTAGLAVKDRDYFGVFPLRGKPLNVREASLKKLAACEEIQ 478

Query: 500  NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
             + KI+GL    +Y N   LRYGHLMIM+DQ                            D
Sbjct: 479  CVMKIMGLDIRQKYENADGLRYGHLMIMSDQ----------------------------D 510

Query: 560  HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFYSMPDYEA 615
            HDGSHIKGLLINFIH FWP+LL++P FL +FITPIVKA  K     GK +SF+SMPDY  
Sbjct: 511  HDGSHIKGLLINFIHCFWPNLLRVPGFLQQFITPIVKARPKGRGGAGKAISFFSMPDYFE 570

Query: 616  WKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKK 675
            WK+++G N S++ I+YYKGLGTS ++EG+EYF+NI  H+ +FV ++  + + I +AF K 
Sbjct: 571  WKKAIGDNLSNYQIRYYKGLGTSGAEEGREYFENIDRHRLNFVEQEQSEEDRIVMAFGKD 630

Query: 676  KIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDGLKP 731
            ++E RK+W+  F+   ++++   Y    + Y DFV+KELILFS+AD +RSIPS++DG KP
Sbjct: 631  RVEDRKEWITNFKTNVNVNESMDYNVRQVSYRDFVDKELILFSIADCERSIPSVIDGFKP 690

Query: 732  GQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLL 791
            GQRKILF  FKRN +   KV Q +GYVSEHSAYHHGEQSL  TI+GMAQDFVGSNN+ LL
Sbjct: 691  GQRKILFSCFKRNLVNSIKVVQLAGYVSEHSAYHHGEQSLVQTIVGMAQDFVGSNNVPLL 750

Query: 792  QPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPI 851
            + +GQFGTR  GGKD A+ RYIFTRL  ++R +F   DD +++Y ++DG  +EP +Y+P+
Sbjct: 751  RKDGQFGTRLHGGKDHAAGRYIFTRLMQVSRAIFHPADDFVVEYKDDDGLSVEPFFYIPV 810

Query: 852  IPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTAS 911
            IP VLVNG+ GIGTG+S+ IPNYNP +I++N+ RL+ GE +  M PWY GF GT+E+   
Sbjct: 811  IPMVLVNGTTGIGTGFSTSIPNYNPLEIISNLERLMRGEEVHKMQPWYFGFTGTMEE--- 867

Query: 912  KEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDT 971
            KE G  +   G  E   +  + I ELPI  WTQ Y++FLE +  +    +  +R+++ D 
Sbjct: 868  KEPG-KFVSHGRYEIRPDGVVCITELPIGVWTQAYKKFLEDM--REKELVVQYREHTTDV 924

Query: 972  TVDFEVFLSEESMMR-TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            TVDFEVFL  + + +   Q+ + ++ +L   +  +N+  F+ +G I KY   E +L+EF+
Sbjct: 925  TVDFEVFLHPQVLEQWVSQDVVEERLQLKEYVHATNIIAFNKEGQITKYSDAESVLKEFY 984

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +RL++Y KRK+  L  L     KLEN VRF+  VV G +VV  RK+ +LL +L+++ + 
Sbjct: 985  LVRLDYYAKRKQYLLGELRRLTSKLENMVRFVREVVEGTLVVTKRKKKELLEDLQRRMYL 1044

Query: 1091 PFPKNSK------SIEAVVAGATDETEESEEN-------------------PEVVNGVQS 1125
            PFP  +K      ++E        + + SEE+                   PEV    + 
Sbjct: 1045 PFPPYTKKKLSSTTVEEGDGEGAPDAQNSEEDVLGMGNAADGGADDGAAEPPEVRRATR- 1103

Query: 1126 IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL- 1184
             DYDYLL M + +LT E +  L A  D+   +   +   TP+ +W++DL  L  +L+   
Sbjct: 1104 -DYDYLLGMKLWSLTAEMIARLEAQMDRARRDTATMEARTPKDMWMEDLKVLRTKLESFY 1162

Query: 1185 -DKSDARAEEERMKIK 1199
             D+    A  +R K+K
Sbjct: 1163 ADREVEIATIQRKKVK 1178


>gi|440474068|gb|ELQ42835.1| DNA topoisomerase 2 [Magnaporthe oryzae Y34]
 gi|440485894|gb|ELQ65810.1| DNA topoisomerase 2 [Magnaporthe oryzae P131]
          Length = 1680

 Score = 1077 bits (2785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/1214 (47%), Positives = 779/1214 (64%), Gaps = 78/1214 (6%)

Query: 12   SNNANVVGPTAPN--KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI 69
            S N + V  T P   KT  E YQK +QLEHI+ RPDTYIGS+E+    +W + +++  + 
Sbjct: 111  SLNLDDVADTKPQTKKTATETYQKLTQLEHIIKRPDTYIGSVERTETKMWTFNKQTGLVE 170

Query: 70   HRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQ 129
            +R +++VPGLYKIFDEILVNAADN QRD  M  +KV +D+E   ISV N+G G+PVE+H+
Sbjct: 171  NRIVAFVPGLYKIFDEILVNAADNSQRDKTMTYLKVTVDRESGQISVENNGKGIPVEMHE 230

Query: 130  EEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYK 189
            +E VY+PELIFGHLLT SNYDD   KT GGRNGYGAKLTNIFSTEFI+E  D    K+YK
Sbjct: 231  KEKVYIPELIFGHLLTGSNYDDKELKTVGGRNGYGAKLTNIFSTEFILEAQDSSNGKRYK 290

Query: 190  QVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGC 248
            Q +TNNM    +  I+  K  D + +V+F PD A+F M   ++DD+  L+ +RV D+AG 
Sbjct: 291  QTWTNNMSNCGKAKITSNKTQD-FVRVTFTPDYARFGMPDGIDDDLEGLLYRRVYDMAGT 349

Query: 249  LGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE------------------RWE 290
            L  +VKV LNG ++ V +F +Y +MY KS+ +  + V E                  RW+
Sbjct: 350  LDSNVKVHLNGEQLKV-NFKKYCEMYAKSIAQERDDVPEGEDSKVAEVIFEDPKAHKRWK 408

Query: 291  ICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNH 350
            +  T+S+GQFQQVSFVN IAT +GGTHV+Y+A+Q+   ++A +NKK K  ++K HN+KN+
Sbjct: 409  VGFTVSDGQFQQVSFVNSIATTQGGTHVNYIADQITAALLADLNKKKKGHSLKQHNIKNY 468

Query: 351  LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFK 410
            +++FV  LI+NPAF SQTKE LT + S FGSKC L+E FLKKV     I E ++ +A  K
Sbjct: 469  IFIFVTCLIENPAFTSQTKEQLTTKASQFGSKCPLTEPFLKKVRQTEAI-ENIIHFAEKK 527

Query: 411  QSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD 470
              K L K+DG K   +    KL DANLAG ++  +CTL+LTEGDSA+ LA+AG +++  D
Sbjct: 528  ADKMLSKSDGNKRSRISN-EKLVDANLAGTKHGHECTLVLTEGDSARGLAVAGRAILDPD 586

Query: 471  RFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQ 530
            R GVFPLRGK+LNVR+AS +Q+L N EI NIK+ LGLK    Y + K LRYGHLMIM DQ
Sbjct: 587  RIGVFPLRGKMLNVRDASIDQILKNKEIQNIKQFLGLKHKQVYTDTKGLRYGHLMIMADQ 646

Query: 531  VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
                                        DHDGSHIKGLLINF+   +PSLL+IP F  EF
Sbjct: 647  ----------------------------DHDGSHIKGLLINFLQVQFPSLLQIPDFFQEF 678

Query: 591  ITPIVKA-----TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKE 645
            ITP+VK        K  K+ +F++MP YE WKE+       W  KY KGLG+S++++ + 
Sbjct: 679  ITPVVKVWQGSNPKKPTKLKTFFNMPQYEEWKEAHKHEIRRWDYKYLKGLGSSSNEDAQV 738

Query: 646  YFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDF 705
            YF ++ LH K F      + E  ELAFSKKK +ARK+WL  F PG  LD   K I YSDF
Sbjct: 739  YFTDLDLHLKQFHTMKPDEIELFELAFSKKKADARKEWLGNFIPGTFLDHSTKQITYSDF 798

Query: 706  VNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYH 765
            VNKELILFSMAD  RSIPSM+DGLKPGQRK++F  FK+N +K+ KV + +GYVSE +AYH
Sbjct: 799  VNKELILFSMADNMRSIPSMIDGLKPGQRKVIFACFKQNLVKDKKVVELAGYVSEKAAYH 858

Query: 766  HGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLF 825
            HGE SL  TI+G+AQ++VGSNN+N L+P+G FG+R QGG DAASARYI TRLSP  R +F
Sbjct: 859  HGEASLQQTIIGLAQNYVGSNNVNCLEPSGNFGSRLQGGSDAASARYIHTRLSPFARRVF 918

Query: 826  PKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRR 885
               D+ +L +  +DG+ IEP  Y P+IP VLVNG++GIGTGWS+ IPNY+P +IV N++R
Sbjct: 919  NPLDEPVLQHQVDDGKAIEPKVYAPVIPMVLVNGADGIGTGWSTSIPNYHPEEIVRNIKR 978

Query: 886  LLNG------EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPI 939
             +        +  EPM PW+RG+ GT E   +      +     +++ N   + I ELPI
Sbjct: 979  RMGRLDVPEEQEFEPMTPWWRGWKGTPEPEDASRIRFKFNGIANLDDKNPNEVVITELPI 1038

Query: 940  RRWTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESM--MRTKQEGLLKK 995
            R WT D++  LE II  ++  S+I+ +++++D   V F + L E+ M   R     LL++
Sbjct: 1039 RMWTDDFKARLEEIIRAEKTPSWIKDYKEFNDHKNVHFIIQLDEKHMKEFRDSPNLLLER 1098

Query: 996  FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKL 1055
            FKL   ++ +N+  FD+ G I+KYD  E ILEEF+H RL  Y  RK   L   + +  KL
Sbjct: 1099 FKLQKNVAITNLVAFDTNGQIRKYDKVEDILEEFYHYRLNVYAARKAHWLRVFDADYRKL 1158

Query: 1056 ENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEE 1115
             N+ RFI  +++G++VV+ +K++ L+ ELRQ+ + PFPK     +A       E EE +E
Sbjct: 1159 TNQYRFISEIIDGKLVVSKKKKSVLVQELRQRKYEPFPKGETGKKAQDEEEEFEDEEEDE 1218

Query: 1116 NPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
              E  N  Q         MAI +LT E+++ L    +    E D+L   + + LW KDLD
Sbjct: 1219 RQE-TNKQQ---------MAIWSLTHERLERLKKQLEAKKAEFDELNSKSEKDLWCKDLD 1268

Query: 1176 ALDMQLDELDKSDA 1189
               M+ +   K DA
Sbjct: 1269 DFVMEWENQLKLDA 1282


>gi|154340639|ref|XP_001566276.1| DNA topoisomerase ii [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134063595|emb|CAM39778.1| DNA topoisomerase ii [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 1501

 Score = 1077 bits (2785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 559/1199 (46%), Positives = 771/1199 (64%), Gaps = 79/1199 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+E++YQKK+Q EHIL RPD YIG+IE  T  +W+Y++    M  R  ++ PGLYKIFD
Sbjct: 3    KTVEQIYQKKTQHEHILTRPDMYIGTIEPVTDDIWVYDDAENIMKQRKCTWTPGLYKIFD 62

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP    V  V   E D + V+N+G+G+P++ H+E  ++VPE+IFGHLL
Sbjct: 63   EILVNAADNKVRDPLGQTVIRVWMTE-DYVRVYNNGEGIPIQRHREHDLWVPEMIFGHLL 121

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYDD   K TGGRNG+GAKLTN+FS +F +ET   +  KK+   +TNNM +  +P I
Sbjct: 122  TSSNYDDEEAKVTGGRNGFGAKLTNVFSKQFEVETVHSRSRKKFYMKWTNNMLQHDDPII 181

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
              C+  D +T V+F PD A+F++    +D++ +MK+RV D+AGC  K++K  LN  R+  
Sbjct: 182  VPCESAD-YTMVTFYPDFARFHVDKFSEDILLMMKRRVYDVAGCTDKTLKCFLNDERIAC 240

Query: 265  KSFAEYVDMYP----KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDY 320
             +F EYVD+YP    +     + R N+RWE+CV +S    QQVSFVN IAT +GGTHV Y
Sbjct: 241  TTFPEYVDLYPTMGEERKAASYSRANDRWELCVRVSNIGPQQVSFVNSIATTRGGTHVKY 300

Query: 321  VANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFG 380
            + +Q+   V+    KK K  +VK+H ++ H+++FVN LIDNP+FDSQTKETL   +S FG
Sbjct: 301  IMDQIVTKVVEQAKKKKKT-DVKSHMIRPHIFLFVNCLIDNPSFDSQTKETLNTVKSKFG 359

Query: 381  SKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAG 439
            S C+L    +  +   SGIVE  +  AN K +K++  K   +  + + GI KL+DAN AG
Sbjct: 360  STCDLPNSIVDYIM-NSGIVERSVEMANSKIAKEMASKIKSSDRKQIMGIPKLDDANEAG 418

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
            G++  +CTLILTEGDSAK L  AGL+V  RD FGVFPLRGK LNVREAS  ++    EI 
Sbjct: 419  GKHGHRCTLILTEGDSAKTLCTAGLAVKDRDYFGVFPLRGKPLNVREASLKKLAACEEIQ 478

Query: 500  NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
             + KI+GL    +Y N   LRYGHLMIM+DQ                            D
Sbjct: 479  CVMKIMGLDIRQKYENTDGLRYGHLMIMSDQ----------------------------D 510

Query: 560  HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFYSMPDYEA 615
            HDGSHIKGLLINFIH FWP+LL++P FL +FITPIVKA  K     GK +SF+SMPDY  
Sbjct: 511  HDGSHIKGLLINFIHCFWPNLLRVPGFLQQFITPIVKARPKGRGGAGKAISFFSMPDYFE 570

Query: 616  WKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKK 675
            WK+++G N S++ I+YYKGLGTS ++EG+EYF+NI  H+  FV +D  + + I +AF K 
Sbjct: 571  WKKAIGDNLSNYQIRYYKGLGTSGAEEGREYFENIDRHRLSFVEQDQSEEDRIVMAFGKD 630

Query: 676  KIEARKKWLLQFEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDGLKP 731
            ++E RK+W+  F+   ++++   Y    + Y DFV+KELILFS+AD +RSIPS +DG KP
Sbjct: 631  RVEDRKEWITNFKTNVNVNESMDYSVRQVSYRDFVDKELILFSIADCERSIPSAIDGFKP 690

Query: 732  GQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLL 791
            GQRKILF  FKRN +   KV Q +GYVSEHSAYHHGEQSL  TI+GMAQDFVGSNN+ LL
Sbjct: 691  GQRKILFSCFKRNLVNSIKVVQLAGYVSEHSAYHHGEQSLVQTIVGMAQDFVGSNNVPLL 750

Query: 792  QPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPI 851
            + +GQFGTR  GGKD A+ RYIFTRL  + R +F   DD +++Y ++DG  +EP +Y+P+
Sbjct: 751  RKDGQFGTRLHGGKDHAAGRYIFTRLMHVARAIFHPADDFVVEYKDDDGLSVEPFYYIPV 810

Query: 852  IPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTAS 911
            IP VLVNG+ GIGTG+S+ IPNYNP +++ N+ RL+ GE +  M PWY GF GT+E+   
Sbjct: 811  IPMVLVNGTTGIGTGFSTSIPNYNPLEVIRNLERLMRGEEVHKMQPWYFGFTGTMEE--- 867

Query: 912  KEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDT 971
            KE G  +   G  E   +  + I ELPI  WTQ Y++FLE +  +    +  +R+++ D 
Sbjct: 868  KEPG-KFISHGRYEVRPDGVVCITELPIGVWTQTYKKFLEDM--REKELVVQYREHTTDV 924

Query: 972  TVDFEVFLSEESMMR-TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            TVDFEVFL  + + +   Q+ + ++ +L   +  +N+  F+ +G I KY   E +L++F+
Sbjct: 925  TVDFEVFLHPQVLEQWVAQDVVEERLQLKEYVHATNIIAFNKEGQITKYWDAESVLKDFY 984

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             +RL++Y KRK   L  L     KLEN VRF+  VV G +VV  RK+ +LL +L+ + + 
Sbjct: 985  LVRLDYYAKRKDYLLGELRRLTSKLENMVRFVREVVEGTLVVTKRKKKELLEDLQGRLYL 1044

Query: 1091 PFPKNSK------SIEAVVAGATDETEESEEN-------------------PEVVNGVQS 1125
            PFP ++K      ++E     A   T+ SEE+                   PEV    + 
Sbjct: 1045 PFPPHAKKKLSSTTVEEEGGEAEPTTQNSEEDVLGMGSAADGGVDDGDAETPEVRRATR- 1103

Query: 1126 IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL 1184
             +YDYLL M + +LT E +  L A   +   +   +   TP+ +W++DL  L  +L+  
Sbjct: 1104 -NYDYLLGMKLWSLTAEMIARLEAQLARARHDTATMEARTPKDMWMEDLQVLRTKLESF 1161


>gi|380477884|emb|CCF43907.1| topoisomerase IV, partial [Colletotrichum higginsianum]
          Length = 1728

 Score = 1077 bits (2784), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 573/1228 (46%), Positives = 795/1228 (64%), Gaps = 85/1228 (6%)

Query: 19   GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPG 78
            GP +  KT  + YQK +QLEHI+ RPDTYIGS+E   Q +W++ +E+K M +R +++VPG
Sbjct: 55   GPKS-KKTATDTYQKLTQLEHIIKRPDTYIGSVEPTEQPMWVFNKETKLMEYRKVTFVPG 113

Query: 79   LYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
            LYKIFDEILVNAADNKQRD  M  +K+ +D+E   I+V N+G G+PVEIH +E +Y+PE+
Sbjct: 114  LYKIFDEILVNAADNKQRDATMTYMKISVDREAGEITVENNGKGIPVEIHGKEKIYIPEM 173

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            IFGHLLT SNYDD+ KKT GGRNGYGAKL N+FS +F +E  D    K+YKQV+T+NM K
Sbjct: 174  IFGHLLTGSNYDDDEKKTVGGRNGYGAKLCNVFSEQFTLECQDSNSGKRYKQVWTDNMSK 233

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
              +  I+  K  D + +V+FKPD  +F+MT ++DD+ AL+ +RV D+AG + + +KV +N
Sbjct: 234  CGKAKITSSKTSD-FVRVTFKPDFKRFSMTGIDDDLEALIYRRVYDMAGTV-RGIKVHMN 291

Query: 259  GHRVPVKSFAEYVDMYPKSVTRFHERVNE------------------RWEICVTLSEGQF 300
            G  + + +F  Y +MY K++ +  ER  E                  RWEI  T+S+G F
Sbjct: 292  GTHIKL-AFKGYCEMYAKAIAK--ERGAEEGVEPKVVVEVDKTDAHPRWEIAFTVSDGSF 348

Query: 301  QQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALID 360
            QQVSFVN IAT  GGTHV+Y+A+Q+   ++  ++KK K   +K ++++NH+++FVN L++
Sbjct: 349  QQVSFVNSIATTSGGTHVNYIADQITGSLLKTLDKKKKGHALKQNHIRNHIFIFVNCLVN 408

Query: 361  NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG 420
            NPAF SQTKE +T + S FGSKC L+EEFLKK+ AKS  ++ ++ +A  K  K + K+DG
Sbjct: 409  NPAFTSQTKEQMTTKVSQFGSKCSLTEEFLKKI-AKSDAIQNIIDFAEKKADKMMAKSDG 467

Query: 421  TKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGK 480
             K   +   SKL DANLAG R+  +CTLILTEGDSAK+LA+AG +++  DR GVFPLRGK
Sbjct: 468  NKRSRISN-SKLVDANLAGTRHGHECTLILTEGDSAKSLAVAGRAILDPDRIGVFPLRGK 526

Query: 481  LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLL 540
            +LNVR+AS +Q+  N EI NIK+ LGLK    Y + KSLRYGHLMIM DQ          
Sbjct: 527  MLNVRDASIDQITKNQEIQNIKQFLGLKHKQTYTDTKSLRYGHLMIMADQ---------- 576

Query: 541  WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--- 597
                              DHDGSHIKGLLINF+   +PSLL+IP F  EFITPIVK    
Sbjct: 577  ------------------DHDGSHIKGLLINFLQVQYPSLLQIPDFFREFITPIVKVWQG 618

Query: 598  --TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKK 655
                K  ++ SF++ P YE WKE      S W  KY+KGLGTS++++ + YF N+  H K
Sbjct: 619  PNPKKPARLKSFFTQPQYEEWKELHKSELSRWHYKYFKGLGTSSNEDAQVYFTNLDDHLK 678

Query: 656  DFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSM 715
            +F     ++ E  +LAFSKKK +ARK+WL  F PG  LD   K I Y+DFVN+ELILFSM
Sbjct: 679  EFDTMKPEEVELFDLAFSKKKADARKEWLGNFVPGTFLDHSTKSITYTDFVNRELILFSM 738

Query: 716  ADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTI 775
            AD  RSIPS+VDGLKPGQRK+++  FKRN +K+ KV + +GY+SE ++YHHGE SL  TI
Sbjct: 739  ADNMRSIPSVVDGLKPGQRKVMYACFKRNLVKDQKVVELAGYISEQTSYHHGEASLQQTI 798

Query: 776  LGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDY 835
            +G+AQ+FVGSNNIN L+P+G FG+R  GG DAAS RYI TRLSP  R +F   D+  L+ 
Sbjct: 799  IGLAQNFVGSNNINCLEPSGNFGSRLAGGSDAASPRYIHTRLSPFARKIFSALDEPNLEP 858

Query: 836  LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN------- 888
              EDG++IEP  Y PIIP +L NG++GIGTGWS+ IPNY+P DIV N++R +        
Sbjct: 859  QYEDGKRIEPKVYAPIIPMILCNGADGIGTGWSTSIPNYHPIDIVNNLKRRMGRLDESTP 918

Query: 889  -GEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETT--LRIKELPIRRWTQD 945
                 +PM PW+RG+ GT E++        Y   GI  E++E T  + + ELPIR WT D
Sbjct: 919  EDAAFQPMMPWFRGWKGTPEQSEKDR----YKFNGIC-ELDERTGEVVVTELPIRMWTDD 973

Query: 946  YREFLESIID--QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTIS 1003
            ++  LE +I   +   +I+ +++++D   V F + + ++       +GL+++FKL+  ++
Sbjct: 974  FKAKLEEVISGVKGPVWIKDYKEFNDHKNVHFVIQMDDKHSKDVLADGLMERFKLSKQVA 1033

Query: 1004 TSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFIL 1063
            TSN+  FD++G I+KY+  E+ILEEF++ RL+ Y +RKK  L     +  KL  + RFI 
Sbjct: 1034 TSNLVAFDTRGQIRKYEKVEEILEEFYNYRLDMYAQRKKHWLGVYHSDYRKLSEQARFIR 1093

Query: 1064 GVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGV 1123
             +++G+++V  +K+  L+ EL ++ +  FPKN          +TDE  E  +  E  N  
Sbjct: 1094 EIIDGKLIVAKKKKQVLVEELAKRKYEAFPKNKDK--NAKKKSTDEDMEGNDEDEEDNDE 1151

Query: 1124 QSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL------ 1177
            Q+  YDYLLSM I +LT E+++ L    D    E D L   + + LW +DLD        
Sbjct: 1152 QTNGYDYLLSMPIWSLTYERLERLQRQIDNKKAEHDALLALSEKDLWTQDLDEFVAEWEN 1211

Query: 1178 DMQLDELDKSDARAEEERMKIK-GNGNG 1204
             M LD   +++ R    R+  K G G G
Sbjct: 1212 QMALDAEIQTNIRRLGRRVSKKIGAGKG 1239


>gi|310795452|gb|EFQ30913.1| topoisomerase IV [Glomerella graminicola M1.001]
          Length = 1779

 Score = 1076 bits (2783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 643/1528 (42%), Positives = 900/1528 (58%), Gaps = 154/1528 (10%)

Query: 19   GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPG 78
            GP +  KT  + YQK +QLEHI+ RPDTYIGS+E   Q +W++ +E+  M +R ++YVPG
Sbjct: 112  GPKS-KKTATDTYQKLTQLEHIIKRPDTYIGSVEPTEQPMWVFNKETNLMEYRKVTYVPG 170

Query: 79   LYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
            LYKIFDEILVNAADNKQRD  M  +K+ +D+E   I+V N+G G+PVEIH +E +Y+PE+
Sbjct: 171  LYKIFDEILVNAADNKQRDATMTYMKISVDREAGEITVENNGKGIPVEIHGKEKIYIPEM 230

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            IFGHLLT SNYDD+ KKT GGRNGYGAKL N+FS +F +E  D    K+YKQ++T+NM K
Sbjct: 231  IFGHLLTGSNYDDDEKKTVGGRNGYGAKLCNVFSEQFTLECQDSNNGKRYKQIWTDNMSK 290

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
              +  I+  K  D + +V+FKPD  +F+MT ++DD+ AL+ +RV D+AG + + +KV LN
Sbjct: 291  CGKAKITSSKTSD-FVRVTFKPDFKRFSMTGIDDDLEALIYRRVYDMAGTV-RGIKVHLN 348

Query: 259  GHRVPVKSFAEYVDMYPKSVTRFHERVNE------------------RWEICVTLSEGQF 300
            G  + + +F  Y +MY K++ +  ER  E                  RWEI  T+S+G F
Sbjct: 349  GTHIKL-AFKGYCEMYAKAIAK--ERGAEEGVEPKVVVEVDKTDAHPRWEIAFTVSDGTF 405

Query: 301  QQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALID 360
            QQVSFVN IAT  GGTHV+Y+A+Q+   ++  ++KK K   +K ++++NH+++FVN L++
Sbjct: 406  QQVSFVNSIATTSGGTHVNYIADQITGSLLKTLDKKKKGHALKQNHIRNHIFIFVNCLVN 465

Query: 361  NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG 420
            NPAF SQTKE +T + S FGSKC L+EEFLKK+ AKS  ++ ++ +A  K  K + K+DG
Sbjct: 466  NPAFTSQTKEQMTTKVSQFGSKCALTEEFLKKI-AKSDAIQNIIDFAEKKADKMMAKSDG 524

Query: 421  TKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGK 480
             K   +   SKL DANLAG R+  +CTLILTEGDSAK+LA+AG +++  DR GVFPLRGK
Sbjct: 525  NKRSRISN-SKLVDANLAGTRHGHECTLILTEGDSAKSLAVAGRAILDPDRIGVFPLRGK 583

Query: 481  LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLL 540
            +LNVR+AS +Q+  N EI NIK+ LGLK    Y + KSLRYGHLMIM DQ          
Sbjct: 584  MLNVRDASIDQITKNQEIQNIKQFLGLKHKQTYTDTKSLRYGHLMIMADQ---------- 633

Query: 541  WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--- 597
                              DHDGSHIKGLLINF+   +PSLL+IP F  EFITPIVK    
Sbjct: 634  ------------------DHDGSHIKGLLINFLQVQYPSLLQIPDFFREFITPIVKVWQG 675

Query: 598  --TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKK 655
                K  ++ SF++ P YE WKE      + W  KYYKGLGTS++++ + YF N+  H K
Sbjct: 676  PNPKKPLRLKSFFTQPQYEEWKEGHRSELARWHYKYYKGLGTSSNEDAQVYFTNLDDHLK 735

Query: 656  DFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSM 715
            +F      + E  +LAFSKKK +ARK+WL  F PG  LD   K I Y+DFVNKELILFSM
Sbjct: 736  EFDTMKPDEVELFDLAFSKKKADARKEWLGNFVPGTFLDHSTKSITYTDFVNKELILFSM 795

Query: 716  ADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTI 775
            AD  RSIPS+VDGLKPGQRK+++  FKRN +K+ KV + +GY+SE ++YHHGE SL  TI
Sbjct: 796  ADNMRSIPSVVDGLKPGQRKVIYACFKRNLVKDQKVVELAGYISEQTSYHHGEVSLQQTI 855

Query: 776  LGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDY 835
            +G+AQ+FVGSNN+N L+P+G FG+R  GG DAAS RYI TRLSP  R +F   D+  L+ 
Sbjct: 856  IGLAQNFVGSNNVNCLEPSGNFGSRLAGGSDAASPRYIHTRLSPFARKIFSPLDEPNLEP 915

Query: 836  LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL------NG 889
              EDG++IEP  Y PIIP +L NG++GIGTGWS+ IPNY+P DIV N++R +      N 
Sbjct: 916  QYEDGKRIEPKVYAPIIPMILCNGADGIGTGWSTSIPNYHPIDIVNNLKRRMGRLDPSNP 975

Query: 890  E--MMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETT--LRIKELPIRRWTQD 945
            E    +PM PW+RG+ GT E++        Y   GI  E++E T  + + ELPIR WT D
Sbjct: 976  EDAAFQPMMPWFRGWKGTPEQSEKDR----YKFNGIC-EIDERTGEVIVTELPIRMWTDD 1030

Query: 946  YREFLESIID--QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTIS 1003
            ++  LE +I   +   +I+ +++++D   V F + + ++       +GLL++FKL+  I+
Sbjct: 1031 FKAKLEEVISGTKGPVWIKDYKEFNDHKNVHFVIQMDDKHTKDILADGLLERFKLSKQIA 1090

Query: 1004 TSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFIL 1063
            TSN+  FD++G I+KY+  E ILEEF++ RL+ Y +RKK  L     +  KL  + RFI 
Sbjct: 1091 TSNLVAFDTRGQIRKYEKVEDILEEFYNYRLDMYAQRKKHWLGVYHSDFRKLSEQARFIR 1150

Query: 1064 GVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGV 1123
             ++ G++VV  +++  L+ EL ++ +  FPKN      V   +TDE  E  +  E     
Sbjct: 1151 EIIEGKLVVAKKRKQVLVEELAKRKYEAFPKNKDK--NVKKKSTDEDMEGNDEDEEDTDE 1208

Query: 1124 QSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL------ 1177
            Q+  YDYLLSM I +LT E+++ L    +    E D L     + LW++DLD        
Sbjct: 1209 QTNGYDYLLSMPIWSLTYERLERLERQIENKKAEHDALLALGEKDLWIQDLDDFVAEWEN 1268

Query: 1178 DMQLDELDKSDARAEEERMKIK-GNGNGDAGPKIVAKRAPKNARKNDKKSNNA-----RA 1231
             M LD   +++ R    R+  K G G G    K     AP   ++   K+  A     +A
Sbjct: 1269 QMALDAEIQTNIRRLGRRVSKKIGAGKGRKAKKDDDDYAPGEKKRAGAKAKAAPKVTEKA 1328

Query: 1232 TEAMGEMDNVTKVVKPK-----------------GRAGLKK--APAEKLDDDEEDEVPDL 1272
             E    M +  K VKPK                 GR G  K  AP+E             
Sbjct: 1329 AERFAAMFDKAK-VKPKKEEAESDAFSDDDFAALGRKGAAKPVAPSE------------T 1375

Query: 1273 KQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSED 1332
            + R A   ++   T  +   +    ++ +   VPA+       + AQK V   +     +
Sbjct: 1376 RPRAAATKKKPIYTLSDSDDEDFASLDKKSTSVPAESATEDNSSQAQKPVAAKKPPPRVE 1435

Query: 1333 EIIIDDDEAFEIAAPEEGK--KGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLL 1390
            E+  DDD  FE    ++    K   K A    A   + E + +G A + Q  AS  ++ +
Sbjct: 1436 ELASDDD--FENLGSKKSSSVKPETKPAAKPAAKLASVEPEAKGNASRTQRAASTKKKYV 1493

Query: 1391 TEMLKPAESSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSPSTSEEVAEVLPPKAR 1450
             +          + V +  ASP                EP+ + PS +           R
Sbjct: 1494 LDESSELSEDNFQSVEEKSASP----------------EPAPAKPSAN----------GR 1527

Query: 1451 PQR-ANRRQARYVLSDSESEKATDDSEF 1477
             QR A  ++++YVL D ESE   +DS+ 
Sbjct: 1528 GQRIAATKKSKYVL-DDESESEANDSQI 1554


>gi|440638703|gb|ELR08622.1| hypothetical protein GMDG_03313 [Geomyces destructans 20631-21]
          Length = 1665

 Score = 1076 bits (2783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 577/1207 (47%), Positives = 770/1207 (63%), Gaps = 78/1207 (6%)

Query: 8    PLTTSNN--ANVVGPT---APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYE 62
            PL T  N   N+ GPT     + +  + YQK + L+HIL RPDTYIGS+E+  Q +W++ 
Sbjct: 114  PLETIENESMNLDGPTESKPKSGSATDRYQKLTPLQHILKRPDTYIGSVERTEQQMWVFN 173

Query: 63   EESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDG 122
             +++ M  R + YVPGLYKIFDEILVNAADNKQ D  M A+KV +D+E   ISV N G G
Sbjct: 174  SQTEQMETRKVQYVPGLYKIFDEILVNAADNKQNDSNMKALKVTVDREKGEISVENDGRG 233

Query: 123  VPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADG 182
            +PVEIH +E +Y+PE+IFGHLLTSSNYDD   KTTGGRNGYGAKL NIFST F +ET D 
Sbjct: 234  IPVEIHNKEKIYIPEMIFGHLLTSSNYDDEESKTTGGRNGYGAKLCNIFSTSFTLETQDS 293

Query: 183  KRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRV 242
            K  K+YKQ +T+NM    +  I+  K  D +T+++F PD  KF M  ++DD   L+K+RV
Sbjct: 294  KNGKRYKQTWTDNMSNMGKAKITANKSSD-FTRITFNPDWKKFQMDGIDDDFEGLVKRRV 352

Query: 243  VDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPK---------------SVTRFHERVNE 287
             DLAG + K V V LNG ++ V SF +Y++MY K               SV    +  ++
Sbjct: 353  YDLAGTV-KGVSVYLNGTKIKVNSFKKYIEMYAKAINAERGLQDAEVKTSVIVDDDDSHK 411

Query: 288  RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN-VKAHN 346
            RWEI   +S+G FQQVSFVN IAT  GGTHV Y+A+Q+   ++  V K NK    +K + 
Sbjct: 412  RWEIGFAVSDGSFQQVSFVNSIATTSGGTHVSYIADQICQRLLDHVKKINKQGTALKTNQ 471

Query: 347  VKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSW 406
            ++NH+++FVN LI NPAF SQTKE LT + S FGSKC+++EEFLKK+  K+  V  ++ +
Sbjct: 472  IRNHIFLFVNCLIVNPAFTSQTKEQLTTKVSQFGSKCQVTEEFLKKIV-KTDAVANIMHF 530

Query: 407  ANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSV 466
            A  K  + L K+DG +   +    KL DANLAG R   +CTLILTEGDSAKALA+AG ++
Sbjct: 531  AQQKADQVLSKSDGNRRSRMTN-PKLVDANLAGTRRGHECTLILTEGDSAKALAVAGRAI 589

Query: 467  VGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKS--LRYGHL 524
            +  DR GVFPLRGK+LNVR+AS +Q+  N+EI NIK+ LGLK    Y + +S  LRYGHL
Sbjct: 590  LDPDRIGVFPLRGKMLNVRDASIDQISKNAEIQNIKQFLGLKHKQVYTDPQSQGLRYGHL 649

Query: 525  MIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIP 584
            MIM DQ                            DHDGSHIKGLLINF+H  +PSLLK+P
Sbjct: 650  MIMADQ----------------------------DHDGSHIKGLLINFLHVAFPSLLKLP 681

Query: 585  SFLVEFITPIVKA----TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTS 640
            +F  EFITPIVK       +     +F++MP Y+ W+E    +  SW  KYYKGLGTST+
Sbjct: 682  NFFQEFITPIVKVWKGPNPRTAISRTFFTMPQYDEWRER-HKHERSWKHKYYKGLGTSTT 740

Query: 641  KEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYI 700
            ++ + YF  +  H K+F     ++ +  +LAFSKK+ + RK+WL  F PG  LD     I
Sbjct: 741  QDAQVYFTKLDEHLKEFEPIKREEEDLFDLAFSKKRADHRKQWLGNFIPGTFLDHSSSKI 800

Query: 701  KYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSE 760
             Y DFVN+ELILFSMAD  RSIPS++DGLKPGQRK+++ +F RN   + KV + +GY S 
Sbjct: 801  SYDDFVNRELILFSMADNMRSIPSVIDGLKPGQRKVIYSAFTRNITSDMKVVELAGYCSG 860

Query: 761  HSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPI 820
             +AY HGEQSL  TI+G+AQDFVGSNN+N L+P+G FG+R  GG DAAS RYI+TRLSP 
Sbjct: 861  LTAYQHGEQSLQGTIIGLAQDFVGSNNVNCLEPSGNFGSRLAGGSDAASPRYIYTRLSPF 920

Query: 821  TRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIV 880
             R +F   D+  L+Y  +D ++IEP  Y PI+P VL+NG+EGIGTGWS+ IPNY+P DIV
Sbjct: 921  ARRVFSPLDEANLEYNTDDDRRIEPKVYCPIVPMVLINGAEGIGTGWSTSIPNYHPEDIV 980

Query: 881  ANVRRLLNG------EMMEPMHPWYRGFGGTIEKTASKEAGV-TYTVTG-IIEEVNETTL 932
             N++R +        +  E M PW+RG+ G +E     EAG   +   G I E   +  +
Sbjct: 981  TNLKRRMGRLDSSEEQPFETMTPWFRGWKGVVE-----EAGPDRFRADGRITEGPGDNEV 1035

Query: 933  RIKELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQE 990
             I ELPIR WT D++  LE +I  ++  SFI+ +++++D   V F V +    M     E
Sbjct: 1036 EITELPIRVWTDDFKGKLEEVIKGEKVTSFIKDYKEFNDHDNVHFVVQMEASQMKAALTE 1095

Query: 991  GLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLEL 1050
            GL +KFKL  TI+TSN+  FD +G I+KY   E+ILEEF+  RL  Y KRK+  L+    
Sbjct: 1096 GLEEKFKLQKTIATSNLVAFDLEGRIRKYTKVEEILEEFYIHRLAMYTKRKQHWLDIFGK 1155

Query: 1051 ELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDET 1110
            E  KL N+ RF+L +++ ++VV+ + +  L+ ELR K + PFPK   + +A    A D  
Sbjct: 1156 EYRKLSNQARFVLEIIDNKLVVSKKTKPKLVAELRAKKYEPFPKVKDAKKA--GEADDVV 1213

Query: 1111 EESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLW 1170
            E  EE P+   G  + DYDYLL + I +LT E+V  L         E+DDL   + + LW
Sbjct: 1214 ENDEEGPDNEEG-GARDYDYLLGLPIWSLTQERVDKLKRQMVDKKAELDDLDSLSEKDLW 1272

Query: 1171 VKDLDAL 1177
             +DLDA 
Sbjct: 1273 CRDLDAF 1279


>gi|417413864|gb|JAA53242.1| Putative dna topoisomerase type ii, partial [Desmodus rotundus]
          Length = 1494

 Score = 1076 bits (2782), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 571/1117 (51%), Positives = 752/1117 (67%), Gaps = 71/1117 (6%)

Query: 110  EHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTN 169
            E ++IS+ N+G G+PV  H+ E VYVP LIFG LLTSSNYDD+ KK TGGRNGYGAKL N
Sbjct: 1    ESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCN 60

Query: 170  IFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH 229
            IFST+F +ETA  +    +KQ + NNM K SE  I K  +G+++T ++F+PDL+KF M  
Sbjct: 61   IFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI-KHFDGEDYTCITFQPDLSKFKMEK 119

Query: 230  LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPK--------SVTRF 281
            L+ D+VALM +R  DLAG   K VKV  NG ++PV  F  YVD+Y K        ++   
Sbjct: 120  LDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVNGFRSYVDLYVKDKLDETGVALKVI 178

Query: 282  HERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK-NA 340
            HE  NERW++C+TLSE  FQQ+SFVN IAT KGG HVDYV +QV   ++ VV KKNK   
Sbjct: 179  HELANERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKKKNKAGV 238

Query: 341  NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIV 400
            +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+  SFGSKC+LSE+F K   +  GIV
Sbjct: 239  SVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQPKSFGSKCQLSEKFFK-AASNCGIV 297

Query: 401  ETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKAL 459
            E++L+W  FK    L KK    K   ++GI KL+DAN AGG++S +CTLILTEGDSAK+L
Sbjct: 298  ESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGKHSLECTLILTEGDSAKSL 357

Query: 460  AMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNN---V 516
            A++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N+EI NI KI+GL+    Y++   +
Sbjct: 358  AVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESL 417

Query: 517  KSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSF 576
            K+LRYG +MIMTDQ                            D DGSHIKGLLINFIH  
Sbjct: 418  KTLRYGKIMIMTDQ----------------------------DQDGSHIKGLLINFIHHN 449

Query: 577  WPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
            WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+++ WK+ +  N  +W IKYYKGLG
Sbjct: 450  WPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPEFDEWKKHIE-NQKAWKIKYYKGLG 506

Query: 637  TSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-------- 688
            TST+KE KEYF ++  H+  F +   +D  AI LAFSKKKI+ RK+WL  F         
Sbjct: 507  TSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRL 566

Query: 689  ---PGNHL-DQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRN 744
               P   L     K++ Y+DF+NKELILFS +D +RSIPS+VDG KPGQRK+LF  FKRN
Sbjct: 567  HGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRN 626

Query: 745  FIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGG 804
              +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ+FVGSNNINLLQP GQFGTR  GG
Sbjct: 627  DKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGG 686

Query: 805  KDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIG 864
            KDAAS RYIFT LSP+ R LFP  DD LL +L +D Q++EP WY+PIIP VL+NG+EGIG
Sbjct: 687  KDAASPRYIFTMLSPLARRLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIG 746

Query: 865  TGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGII 924
            TGW+  +PNY+ R+IV NVRR+L+G    PM P Y+ F GTI++    +    Y V+G I
Sbjct: 747  TGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYKNFKGTIQELGQNQ----YAVSGEI 802

Query: 925  EEVNETTLRIKELPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLS 980
              V+  T+ I ELP+R WTQ Y+E  LE ++   D+  + I  +++Y  DTTV F V ++
Sbjct: 803  FVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMT 862

Query: 981  EESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKR 1040
            EE + + +  GL K FKL TT++  +M LFD  G +KKY+T + IL+EFF +RL +Y  R
Sbjct: 863  EEKLAQAEAAGLHKVFKLQTTLTCFSMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGLR 922

Query: 1041 KKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIE 1100
            K+  +  L  E  KL N+ RFIL  + G+I + NR + DL+  L Q+G+   P  +    
Sbjct: 923  KEWLVGMLGAESTKLNNQARFILEKIQGKIAIENRSKKDLIQMLVQRGYESDPVKAWKEA 982

Query: 1101 AVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVD 1159
               A   +E++   ++    +G  S  D++Y+L+M++ +LT EKV+ L+  RD    EV+
Sbjct: 983  QEKAAEEEESQNQHDDSSSDSGTPSGPDFNYILNMSLWSLTKEKVEELIKQRDSKGREVN 1042

Query: 1160 DLRKATPESLWVKDLDALDMQLDELDKSDARAEEERM 1196
            DL++ +P  LW +DL A    ++ELDK +A+  E+ M
Sbjct: 1043 DLKRKSPSDLWKEDLAAF---VEELDKVEAQEREDIM 1076


>gi|171683279|ref|XP_001906582.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941599|emb|CAP67253.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1767

 Score = 1075 bits (2780), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 568/1187 (47%), Positives = 777/1187 (65%), Gaps = 78/1187 (6%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E YQK +QLEHI+ RPDTYIGS+E+  Q +W++ +  K M +R +S+VPGLYKIFDEILV
Sbjct: 123  ETYQKLTQLEHIIKRPDTYIGSVERTDQKMWVFNKTEKLMENRVVSFVPGLYKIFDEILV 182

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADN QRD  M  +KV ID E   ISV N+G G+PVE+HQ+EG Y+PELIFGHLLT SN
Sbjct: 183  NAADNSQRDASMTFLKVTIDSETGEISVENNGKGIPVEMHQKEGCYIPELIFGHLLTGSN 242

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD+ KKT GGRNGYGAKLTNIFS +F +E  D    K+YKQ +T+NM K  +P I+  K
Sbjct: 243  YDDDEKKTVGGRNGYGAKLTNIFSLKFTLECQDSVNGKRYKQTWTDNMSKMEKPKITANK 302

Query: 209  EGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSF 267
              D + +V+F PD  +F M + ++DD+ ALM +RV D+AG +  SVKV LNG ++ +  F
Sbjct: 303  TND-FVRVTFLPDYKRFGMENGIDDDLEALMYRRVYDMAGTMA-SVKVWLNGEQLKIAKF 360

Query: 268  AEYVDMYPKSVTRF-----------------HERVNER---WEICVTLSEGQFQQVSFVN 307
              Y  +Y KS+                    +E V ++   W++  T+S+G FQQVSFVN
Sbjct: 361  KGYCQLYAKSIAAERGDVVPEGEKPTAANVEYEEVRDKGRTWQVGFTVSDGSFQQVSFVN 420

Query: 308  GIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
             IAT  GGTHV+Y+A+Q+   ++  +NKK K   +K  N +N++++F+N L+DNPAF SQ
Sbjct: 421  NIATTSGGTHVNYIADQITEALLKELNKKKKGHGLKPANFRNYIFIFINCLVDNPAFTSQ 480

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
            TKE LT + S+FGSKC LS+ FLKKV  KS ++  ++ +A  K  K L K+DG K   V 
Sbjct: 481  TKEQLTTKVSAFGSKCILSDAFLKKVQ-KSEVIANIMEFAERKADKMLAKSDGNKRARVS 539

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
               KL DANLAG +   +CTLILTEGDSA+ALA+AG +V+  DR GVFPLRGK+LNVR+A
Sbjct: 540  N-EKLVDANLAGTKRGHECTLILTEGDSARALAVAGRAVLDPDRIGVFPLRGKMLNVRDA 598

Query: 488  SSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            S+ Q++ N EI NIKK LGLK    Y + + LRYGHLMIM DQ                 
Sbjct: 599  STEQIMKNKEIENIKKFLGLKHKQVYTDTRGLRYGHLMIMADQ----------------- 641

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK---ATN--KNG 602
                       D DGSHIKGLLINF+   +PSLL+IP+F  +FITP+VK    TN  K  
Sbjct: 642  -----------DLDGSHIKGLLINFLEVQFPSLLRIPNFFQQFITPVVKVWQGTNPKKPL 690

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            +  SF+++ +YE WKE+       W  KY KGLG+S++++ + YF ++  H K+F     
Sbjct: 691  RPKSFFNLVEYETWKENNKNELRKWKYKYLKGLGSSSNEDAQVYFTDLDRHLKEFETLKP 750

Query: 663  QDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
            ++ + +++ FSKKK +ARK+WL  F PG  LD   + I YS F+  E ILFSMAD  RSI
Sbjct: 751  EESQMLDMIFSKKKADARKEWLGNFVPGTFLDSTAQRISYSQFLQNEFILFSMADNIRSI 810

Query: 723  PSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDF 782
            PSM+DG KPGQRK+++ +FKRN + + KV + +GY+SE +AYHHGEQSL  TI+G+AQ F
Sbjct: 811  PSMIDGFKPGQRKVIYSAFKRNLVNDQKVVELAGYISEQAAYHHGEQSLQQTIIGLAQTF 870

Query: 783  VGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQ 842
            VGSNN+N L+P+G FG+R  GGKD+ASARYI TRLSP  R +F K D+  L+Y  +DG  
Sbjct: 871  VGSNNVNCLEPSGNFGSRLSGGKDSASARYIHTRLSPFARKVFSKLDEPNLEYQFDDGNM 930

Query: 843  IEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG--------EMMEP 894
            IEP  Y PI+P VLVNG++GIGTGWS+ IPNY+P  IV N+RR +          +   P
Sbjct: 931  IEPKVYAPILPMVLVNGADGIGTGWSTSIPNYHPMHIVENLRRRMGRFDPDDTEEKPFVP 990

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGII--EEVNETTLRIKELPIRRWTQDYREFLES 952
            M PW+RG+ GT E    +EA   +   GII  +E N   + + ELPIR WT D++  LE 
Sbjct: 991  MAPWWRGWKGTPE----QEAPNKWRFNGIIRQDEQNPNEIHVTELPIRMWTDDFKAKLED 1046

Query: 953  II--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
            II  D+  +FI+ +++++D  TV F + + E+      +EGLL+KFKLTTT+ST+N+  F
Sbjct: 1047 IIQNDKTPTFIKDYKEFNDHKTVHFIIDMDEKHREAALREGLLEKFKLTTTVSTTNLVAF 1106

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D++G I+KYD  E+I+EE++H RL+ Y +RKK  L+    +  KL+N+ RFI  +++ ++
Sbjct: 1107 DTQGKIRKYDNVEEIMEEYYHYRLKMYTERKKHWLKVYHADYRKLKNQYRFITEIIDNKM 1166

Query: 1071 VVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
            VVN +K+  L+ ELR + +  FP   K  + V +   +   E  E+ +   G +  DYDY
Sbjct: 1167 VVNRKKKAVLVQELRDRDYEAFP--PKEDKKVKSPDEEMAAEEAEDDDTAGGAR--DYDY 1222

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            LLSM + + T E+++ L         E D+L+  + + LWVKDLDA 
Sbjct: 1223 LLSMPVWSFTSERLERLKNQIAAKKAEHDELQALSEKDLWVKDLDAF 1269


>gi|399216022|emb|CCF72710.1| unnamed protein product [Babesia microti strain RI]
          Length = 1309

 Score = 1074 bits (2777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 600/1249 (48%), Positives = 795/1249 (63%), Gaps = 116/1249 (9%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K+IEE YQKKSQLEHILLRPDTYIGS+EKHTQ+LW++++E+  M+ +T++YVPGLYKIFD
Sbjct: 3    KSIEERYQKKSQLEHILLRPDTYIGSVEKHTQSLWVFDDETSKMVQKTVTYVPGLYKIFD 62

Query: 85   EILVNAADNKQRDP-------KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
            EILVNAAD K R+        KM  +KV ID     I V N GDG+P+EIH+E  +YV  
Sbjct: 63   EILVNAADVKARESQRTDVVQKMTTIKVNIDSSTGEIYVWNDGDGIPIEIHKEHNIYVAH 122

Query: 138  LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
            LIFGHLLTS NYDD+ ++ TGGRNG+GAKL NIFS +F +   D KR ++ K  + +NM 
Sbjct: 123  LIFGHLLTSDNYDDSEQRITGGRNGFGAKLANIFSKKFTVCCGDCKRKRELKMTWFDNMS 182

Query: 198  KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL 257
            + S   + +   G ++  V+F PD  KF M  L++    L+KKRV D+AG  G  VKV L
Sbjct: 183  RHSAVKV-RNYSGKDYVSVTFLPDYEKFGMDGLDEGTELLLKKRVYDIAGTSG--VKVFL 239

Query: 258  NGHRVPVKSFAEYVDMYPKS---VTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIK 313
            N +R+PVK+F  YVDMY  +   V R  +  +ERW + VT S+G QFQQVSFVN I TIK
Sbjct: 240  NNNRIPVKNFTTYVDMYLGTNDDVVRISDS-SERWSVVVTKSDGSQFQQVSFVNSICTIK 298

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETL 372
            GG+HV+YV   +   +   +N KNK    VK  +VK+HLWVFVN LI NP+FDSQTKETL
Sbjct: 299  GGSHVNYVIEPMIQAITKKINSKNKGGMQVKVGHVKSHLWVFVNCLITNPSFDSQTKETL 358

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQ----SKDLKKNDGTKTEDVRG 428
            T +   FGSK   S++ +  +  KS I++++++WA  K+     + LK  +  +TE + G
Sbjct: 359  TTKPQKFGSKYMPSDKCINSI-LKSKIMDSVIAWARAKEQVELGRKLKVGNVKQTEKLLG 417

Query: 429  ISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREAS 488
            I KLEDA+ AG + + +CTLILTEGDSAK   +AGLSVVGRD +GVFPL+GKLLNVREAS
Sbjct: 418  IPKLEDASKAGTKFASECTLILTEGDSAKTSCLAGLSVVGRDLYGVFPLKGKLLNVREAS 477

Query: 489  SNQVLNNSEIGNIKKILGLK-QGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
              Q+  N EI +I KI+GL       +  K+LRYG LMIMTDQ                 
Sbjct: 478  FKQLSQNVEIQHILKIMGLDVSNKNLDTPKNLRYGSLMIMTDQ----------------- 520

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSF 607
                       D+DGSHIKGLLIN IH FWPSLLK   FL +FITPI+KAT  N +  SF
Sbjct: 521  -----------DYDGSHIKGLLINLIHQFWPSLLKYRGFLRQFITPIIKATKGNIQT-SF 568

Query: 608  YSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA 667
            Y++ D+  WK+++  +   W IKYYKGLGTST  E KEYF+NI  H  DF W +++    
Sbjct: 569  YTISDFNKWKDTVQ-DIRYWRIKYYKGLGTSTDTEFKEYFKNIKDHLIDFKWRNEECDNK 627

Query: 668  IELAFSKKKIEARKKWL-----LQFEPGNHL--DQKEKYIKYSDFVNKELILFSMADLQR 720
            I++AF+KK++E RK+WL     +Q E    L  D   K + Y DFV+KEL+LFS+ D +R
Sbjct: 628  IDMAFNKKRVEDRKRWLQNHVAMQEEGVASLGVDHSCKELSYQDFVDKELVLFSIYDTER 687

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            SIPS++DGLKPGQRK+LF  FKRN   E KVAQ +GY++EHSAYHHGE SL  TI+ MAQ
Sbjct: 688  SIPSIMDGLKPGQRKVLFGCFKRNLRTECKVAQLTGYIAEHSAYHHGETSLQQTIINMAQ 747

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
             FVGSNNINLL+P GQFG+R +GGKDA++ARYIFT+LS +TR ++   DD +L+Y  E+G
Sbjct: 748  TFVGSNNINLLEPCGQFGSRKEGGKDASAARYIFTKLSELTRLIYHPIDDAILEYQTEEG 807

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
            Q IEP +Y+PI+P VLVNG EGIGTG+SS IPN++P DI+AN++R +N EM+ PM PW++
Sbjct: 808  QSIEPIFYIPILPMVLVNGCEGIGTGFSSTIPNFSPFDIIANIKRYINDEMLIPMTPWFK 867

Query: 901  GFGGTIEKTASKEAGVTYTVTG---IIE---------EVNETTLRIKELPIRRWTQDYRE 948
            GF G+I    +  AG  + V G   ++E          V    +RI ELP+++WTQDY+E
Sbjct: 868  GFKGSI--IPNDRAG--FDVVGKYDVVEYDVFDSKNGSVPVDIIRITELPVKKWTQDYKE 923

Query: 949  FLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMH 1008
            FLES +   DS I GF   S    VDFEV +      +     L K  KL ++IS +N+ 
Sbjct: 924  FLESSVMSEDSQIIGFNDKSSHEHVDFEVHV------KAGTTDLEKLLKLRSSISLTNLT 977

Query: 1009 LFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNG 1068
            LFD+   + KY     IL+EF + RL+ Y KRK+  L     +L  L N+VRFI  V+N 
Sbjct: 978  LFDTNRKLTKYPNELAILKEFANERLKAYGKRKEYLLVKYTQDLKILSNQVRFIKMVINE 1037

Query: 1069 EIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDY 1128
            EIV+ NRK+ DL+ EL++  F P                DE EE  E            Y
Sbjct: 1038 EIVIFNRKKVDLITELKRLKFEPM---------------DEDEEKGE------------Y 1070

Query: 1129 DYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSD 1188
            DYLLSM +  LT E+V  L  +  +    ++ L+  T + +W+ DL AL+  L   +K  
Sbjct: 1071 DYLLSMQLWNLTKERVDKLNENHTQAGNLLEMLKGMTTKQMWLDDLRALEEALKNFEKG- 1129

Query: 1189 ARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGE 1237
              +EE  M    + +  +  K++        RK  K SN+ +  +++GE
Sbjct: 1130 --SEEGEMP---STSHQSQSKLITNL--NKHRKIPKNSNSGKRKKSIGE 1171


>gi|429327596|gb|AFZ79356.1| DNA topoisomerase II, putative [Babesia equi]
          Length = 1170

 Score = 1074 bits (2777), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 582/1180 (49%), Positives = 775/1180 (65%), Gaps = 73/1180 (6%)

Query: 22   APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
            A  KTIEE YQKKSQLEHILLRPDTYIGS E H Q +W+Y+ E   M++  + YVPGLYK
Sbjct: 2    AKPKTIEERYQKKSQLEHILLRPDTYIGSTEMHNQQMWVYDTEKNRMVYENVDYVPGLYK 61

Query: 82   IFDEILVNAAD---NKQRDP---KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYV 135
            IFDE+LVNA D    +Q DP   +M  +KV I +E   I V+N G+ +P+E+H E  +YV
Sbjct: 62   IFDEVLVNAGDVFARQQSDPSLERMTCIKVSISRETGAIVVYNDGEPIPIEVHSEHKMYV 121

Query: 136  PELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNN 195
            P++IFG LLTS NYDD+ ++ TGGRNGYGAKL NIFS  F +   + K+ KK+K  +T+N
Sbjct: 122  PQMIFGELLTSDNYDDSEERITGGRNGYGAKLANIFSKSFTVSVGNKKKRKKFKMTWTDN 181

Query: 196  MGK-KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVK 254
            M K + EP I    +G+++ K++F PD  +FN+T ++D  + L+ KRV D+AG  G  VK
Sbjct: 182  MTKTQGEPKIVPY-QGNDFVKITFIPDYKRFNLTTIDDGTLKLLTKRVYDIAGTTG--VK 238

Query: 255  VELNGHRVPVKSFAEYVDMYPKS---VTRFHERVNERWEICVTLSE-GQFQQVSFVNGIA 310
            V LN  R+P+K F +YVD+Y +S   + + HE+V+ RWE+ V+ S+   F+QVSFVN I+
Sbjct: 239  VFLNNERIPIKDFKQYVDLYFESTLDIIKIHEKVH-RWEVVVSASDDNTFKQVSFVNNIS 297

Query: 311  TIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTK 369
            TIKGG+HV +V + +   +   VN KNK    VK   ++NHL+VF+N  I NPAFDSQTK
Sbjct: 298  TIKGGSHVTHVTDPLIQALCKKVNSKNKGGLEVKPSQIRNHLFVFINCQIVNPAFDSQTK 357

Query: 370  ETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK-KNDGTKTED-VR 427
            ETLT +Q+ FGSK  + E  L +V  KS I + +L W + + + +LK K   +KT D + 
Sbjct: 358  ETLTTKQTKFGSKYTMGERVLGQV-LKSRITDNILRWVHERANIELKRKMKVSKTTDRLM 416

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
            GI KLEDAN AGGR    CTLILTEGDSAK   +AGLSVVGRD++G+FPL+GKLLNVR+A
Sbjct: 417  GIPKLEDANKAGGRFGIDCTLILTEGDSAKTSCLAGLSVVGRDKYGIFPLKGKLLNVRDA 476

Query: 488  SSNQVLNNSEIGNIKKILGLK-QGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIF 546
            S  Q+ +N EI NI KI+GL     + +N + LRYG L+IMTDQ                
Sbjct: 477  SYKQLTHNLEIQNILKIMGLDITKKDLSNPQGLRYGSLLIMTDQ---------------- 520

Query: 547  AWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS 606
                        D+DGSHIKGLLIN  H FWP LL+   F+ EFITPI+KA  K    +S
Sbjct: 521  ------------DYDGSHIKGLLINLFHCFWPKLLQHRGFIREFITPIIKA-KKGDNTIS 567

Query: 607  FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
            F+++ D+  WK  +G + S+W IKYYKGLGTST KE KEYF N+  H  DF + D  D +
Sbjct: 568  FFTIEDFNRWK--IGQDLSTWHIKYYKGLGTSTDKEFKEYFSNLPEHLIDFTYIDQNDDD 625

Query: 667  AIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
            +I+LAFSKK+++ RK WL  F  G+ +D   K+++YSDFVNKELI FS+ D +RSIPSMV
Sbjct: 626  SIDLAFSKKRVDDRKVWLQNFVHGDGIDHSIKHMRYSDFVNKELIQFSIYDTERSIPSMV 685

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DG KPGQRK+LF  FKRN   E KVAQ SGY++EHSAYHHGE SL  TI+ MAQDF GSN
Sbjct: 686  DGWKPGQRKVLFGCFKRNLKNECKVAQLSGYIAEHSAYHHGETSLQQTIVNMAQDFAGSN 745

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            NIN+L+P GQFG+R +GGKD+A+ RYI T+LS +TR ++  DDD +LDY NE+GQ IEP 
Sbjct: 746  NINVLEPCGQFGSRKEGGKDSAAPRYINTKLSYLTRLIYVVDDDAVLDYQNEEGQSIEPY 805

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI 906
            +Y+P+IP VLVNGSEGIGTG+S+ IPNYNP DI+AN++RL+N + M PM PWYR + GTI
Sbjct: 806  YYVPVIPMVLVNGSEGIGTGFSTQIPNYNPLDIIANLKRLINNQEMLPMIPWYRKYSGTI 865

Query: 907  E--KTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI---IDQNDSFI 961
            E  +    +    +TV      VN     I ELPI RWT DY+EFLES+   ++     I
Sbjct: 866  EPNEKGGFDCMGKFTVMDDFGIVN-----ITELPIHRWTNDYKEFLESLQLSVNGKAPLI 920

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDT 1021
              +   S   ++ F V L+ +      +EG+ K  KL TTIST+NM LFD+   +++YDT
Sbjct: 921  LSYLDNSTHESIHFTVNLNPDCYEEILKEGIDKILKLKTTISTTNMTLFDANKRLRRYDT 980

Query: 1022 PEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLL 1081
               IL +F  IRL FY KR+   ++ L++E   L N+VRFI  V+  +IV+  + R  L+
Sbjct: 981  VLDILRDFADIRLVFYNKRRDHLIKQLQIEQQILSNQVRFIDLVITNKIVLFKKSRNQLV 1040

Query: 1082 LELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTL 1141
             EL+   F P+   S     VV  A  +++ S             DY+YLLS+ + +LTL
Sbjct: 1041 SELKALNFDPYSAFSGD---VVLNAASQSDPSTTRS---------DYNYLLSLPLWSLTL 1088

Query: 1142 EKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL 1181
            E ++ L  D +   E++  +   +   LW +DLD L+  L
Sbjct: 1089 EHIKKLNDDYNAKQEQLQRIINTSATQLWQEDLDILETAL 1128


>gi|322695778|gb|EFY87581.1| DNA topoisomerase 2 [Metarhizium acridum CQMa 102]
          Length = 1653

 Score = 1073 bits (2776), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 581/1265 (45%), Positives = 805/1265 (63%), Gaps = 102/1265 (8%)

Query: 7    LPLTTSNNANV---VGPTAP----NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALW 59
            +PL    N +V   V PT P    +KT  EMYQK +QLEHI+ RPDTYIGS+EK  Q +W
Sbjct: 105  VPLAEVENDSVIVDVPPTKPTSKSSKTATEMYQKLTQLEHIIKRPDTYIGSVEKTDQQMW 164

Query: 60   IYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPK-MDAVKVVIDQEHDLISVHN 118
            +Y + +  M ++ I+YVPG YKIFDEI+VNAADN QR+   M  +KV I++E   ISV N
Sbjct: 165  VYNKTTSQMEYKNITYVPGFYKIFDEIMVNAADNSQREGSGMTFMKVNINRETGEISVEN 224

Query: 119  SGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
            +G G+P+ IH++E +Y+PE+IFGHLL  SN+DDN KKT GGRNGYGAKL N+FS EF +E
Sbjct: 225  NGKGIPIVIHEKEKIYIPEMIFGHLLAGSNFDDNEKKTVGGRNGYGAKLCNVFSKEFTVE 284

Query: 179  TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVAL 237
              D    KKYKQ +T+NM K  +  I+  K  D + +++FKPD  +F M   ++DD+ AL
Sbjct: 285  CQDAGNGKKYKQTWTDNMQKMQKAKITSSKSAD-FVRITFKPDYDRFGMPEGIDDDLEAL 343

Query: 238  MKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE---------- 287
            + +RV D+AG +   V+V LNG ++ ++ F  Y D+Y KS+    ER  E          
Sbjct: 344  LYRRVYDMAGTV-HGVRVYLNGEQIKLRDFKAYCDLYAKSIAA--ERTAEEGGTPTCTVE 400

Query: 288  --------RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN 339
                    RWE+  T+S+G FQQVSFVN IAT  GGTHV+Y+A+Q+   ++  ++KK K 
Sbjct: 401  IDKDKSHPRWEVAFTVSDGTFQQVSFVNSIATTTGGTHVNYIADQITGSLLKALDKKKKG 460

Query: 340  ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGI 399
             ++K  +++NH+++F+N  I+NPAF+SQTKE LT + S FGSKC L + FLK + AKS  
Sbjct: 461  HSLKQSHLRNHIFIFINCFIENPAFNSQTKEQLTTKVSQFGSKCVLGDAFLKAI-AKSDA 519

Query: 400  VETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKAL 459
            +E ++ +A  K  K L K+DG+K   V   +KL +ANLAG R   +CTLILTEGDSAK L
Sbjct: 520  IENIMDFAQKKADKMLSKSDGSKRARVSN-AKLVEANLAGTRRGHECTLILTEGDSAKGL 578

Query: 460  AMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSL 519
            A++G +++  D+ GVFPLRGKLLNVR+AS +Q+  N EI NIK+ LGLK    Y + KSL
Sbjct: 579  AVSGRAILDPDKIGVFPLRGKLLNVRDASLDQITKNQEIQNIKQFLGLKHKQVYTDTKSL 638

Query: 520  RYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPS 579
            RYGHLMIMTDQ                            DHDGSHIKGLLINF+   +PS
Sbjct: 639  RYGHLMIMTDQ----------------------------DHDGSHIKGLLINFLQVQFPS 670

Query: 580  LLKIPSFLVEFITPIVKA-----TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKG 634
            LLKIP FL EFITPIVK        K  ++ SF++ P Y+ WKES     S W  KY+KG
Sbjct: 671  LLKIPKFLQEFITPIVKVWQGPDPKKPQRLKSFFTQPQYDEWKESHKAELSRWQSKYFKG 730

Query: 635  LGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLD 694
            LGTS++++ + YF N+  H K+F     ++ E  +L FSKKK +ARK+WL  + PG  LD
Sbjct: 731  LGTSSNEDAQVYFTNLDNHLKEFETMKSEEAELFDLVFSKKKADARKEWLGNYIPGTFLD 790

Query: 695  QKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQF 754
               K I Y+DFV+KELILFSMAD  RSIPS++DGLKPGQRK+L+  FKRN  K+ KV + 
Sbjct: 791  HSTKEITYTDFVSKELILFSMADNLRSIPSVIDGLKPGQRKVLYACFKRNLTKDKKVVEL 850

Query: 755  SGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIF 814
            +GYVSEH+AYHHGE SL  TI+G+AQDFVGSNNIN+L+P+G FG+R  GG DAAS RY F
Sbjct: 851  AGYVSEHTAYHHGEASLQQTIIGLAQDFVGSNNINVLEPSGNFGSRLAGGSDAASPRYTF 910

Query: 815  TRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNY 874
            TRL+P  + +F   D+  L +  EDG++IEP  Y PI+P VLVNG++GIGTGWS+ IPNY
Sbjct: 911  TRLAPFAKKIFSPLDEACLKHQYEDGKRIEPEVYSPILPMVLVNGADGIGTGWSTTIPNY 970

Query: 875  NPRDIVANVRRLLNGEM---------MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIE 925
            +P DIV N++R + G +          E M PW+RG+ G  E          Y   GI  
Sbjct: 971  HPADIVKNLKRRM-GRLDEDDAEEKPFETMTPWFRGWKGNPEAAGPDR----YKFNGIAS 1025

Query: 926  E--VNETTLRIKELPIRRWTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSE 981
            +   N   + I ELPIR WT D++  LE +I  +D  ++I+ +++++D  TV FE+ + E
Sbjct: 1026 QNDQNPNEIIITELPIRMWTDDFKAKLEKVISGSDGPTWIKDYKEFNDHKTVHFEIMVDE 1085

Query: 982  ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
            + + +  +EGLL++FKLT  I+TSN+  FD++G I+KY+  E ILEE++  RL+ Y  RK
Sbjct: 1086 KHLPKILEEGLLERFKLTKQIATSNLVAFDTRGQIRKYEKVEDILEEYYVHRLQMYHARK 1145

Query: 1042 KVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA 1101
            +  L+  + +L KL+N+ RFI  +++GE++V  +K+  L+ ELR + +  FP   +  + 
Sbjct: 1146 QYWLQVYDNDLEKLKNQYRFIKEIIDGELIVGRKKKAVLVSELRDRKYRAFPPGGQKQKT 1205

Query: 1102 VVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
                  +   E++++        + DYDYLLS        E+++ L   +D +N++ DD+
Sbjct: 1206 ADDEPDESDNENDDDDNQDTAAGAHDYDYLLS--------ERLEKL---KDAINKKKDDI 1254

Query: 1162 RKATPES---LWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKN 1218
               + +S   LW  DLD     + E D   A  +E + KI+  G  ++  KI A R  K 
Sbjct: 1255 EGLSAKSEKDLWCADLDDF---MTEWDSQIALEQELQTKIRRMGRRES-KKIGAGRNRKG 1310

Query: 1219 ARKND 1223
               +D
Sbjct: 1311 KDDDD 1315


>gi|328791048|ref|XP_001119985.2| PREDICTED: DNA topoisomerase 2 [Apis mellifera]
          Length = 1447

 Score = 1069 bits (2765), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/1206 (47%), Positives = 764/1206 (63%), Gaps = 141/1206 (11%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            +A  KTIE +YQKKSQLEHILLRPDTYIGS+E  T+ +W+Y++E ++M  + I YVPGLY
Sbjct: 13   SAKKKTIEGIYQKKSQLEHILLRPDTYIGSVEPVTEIMWVYDKEKESMTQKEIKYVPGLY 72

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNAADNKQRDPKMD +K+ I+ E+++ISV N+G G+PV IH+EE +YVP +IF
Sbjct: 73   KIFDEILVNAADNKQRDPKMDTIKIEINAENNIISVWNNGKGIPVVIHKEENMYVPTMIF 132

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            GHLLTSSNYDD  +K TGGRNGYGAKL NIFS  F +ETA  +  K  KQ ++NNMG  S
Sbjct: 133  GHLLTSSNYDDEEEKVTGGRNGYGAKLCNIFSHRFTVETASKEYKKCLKQTWSNNMGSAS 192

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
            EP I K   G+++TKV F PDL+KF M  L+DD++ALM +R  D+A    + VKV LNG 
Sbjct: 193  EPRI-KDFSGEDFTKVIFSPDLSKFKMQSLDDDIIALMSRRAYDIAAST-RGVKVFLNGT 250

Query: 261  RVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATI 312
            ++PVK+F +YVD Y K         +   +E    RWE+ + LS+  FQQ+SFVN IAT 
Sbjct: 251  KIPVKNFKDYVDFYIKGREDDVGNPLKIVYENCGPRWEVAIALSDKGFQQMSFVNSIATT 310

Query: 313  KGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
            KGG HVD+V   +   +   + KKNK    +K   +KNHLW+F+N LI+NP FDSQTKE 
Sbjct: 311  KGGRHVDHVTELIVKQLTETLKKKNKAGVTIKPFQIKNHLWIFINCLINNPTFDSQTKEN 370

Query: 372  LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK-NDGTKTEDVRGIS 430
            +TL+  SFGSKC LSE+F+  VT K GIVE +L+WA FK    L+K    +K   ++GI 
Sbjct: 371  MTLQPKSFGSKCTLSEKFITSVT-KIGIVEAVLTWAKFKADSQLQKLGPKSKQRKLQGIP 429

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KLEDAN AG   S +CTLILTEGDSAK +A++GL+ +GRD++G+FPLRGK+LNVREA+  
Sbjct: 430  KLEDANDAGTNKSLECTLILTEGDSAKTMAVSGLAAIGRDKYGIFPLRGKILNVREATHK 489

Query: 491  QVLNNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            Q+L N+EI N+ KILGL+   +Y    ++K+LRYG +MIMTDQ                 
Sbjct: 490  QILENAEINNLIKILGLQYKKKYETREDLKTLRYGKMMIMTDQ----------------- 532

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSF 607
                       D DGSHIKGLLINFIH  WPSLLK+ +F+ EFITPIVKAT K  +VLSF
Sbjct: 533  -----------DQDGSHIKGLLINFIHHNWPSLLKL-NFVEEFITPIVKAT-KGNQVLSF 579

Query: 608  YSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA 667
            +SMP++  WK S   N  ++ IKYYKGLGTST+KE KEYF+N+T H+  F ++ DQD + 
Sbjct: 580  FSMPEFNKWK-SETENFHTYKIKYYKGLGTSTAKEAKEYFENMTRHRIRFRYDGDQDDQN 638

Query: 668  IELAFSKKKIEARKKWLLQFEPGNHLDQK---------EKY--------IKYSDFVNKEL 710
            I +AFSKK ++ RK WL+     NH+D+          E+Y        + +SDF+N EL
Sbjct: 639  IIMAFSKKCVDQRKDWLM-----NHMDETKRRKEIGLGERYLYEKDTRTVSFSDFINVEL 693

Query: 711  ILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQS 770
            +L+S  D  RSIP+M+DG KPGQRK+L+   KRN  +E KVAQ +G V+EHSAYHHGE S
Sbjct: 694  VLYSNYDNVRSIPNMIDGFKPGQRKVLYTCLKRNDKREVKVAQLAGSVAEHSAYHHGEVS 753

Query: 771  LASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDD 830
            L STI+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT L  I          
Sbjct: 754  LMSTIINLAQNFVGSNNINLLQPIGQFGTRLAGGKDAASPRYIFTMLRYI---------- 803

Query: 831  KLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE 890
                                                   YIPNYNPR+I+ N+ R+++G 
Sbjct: 804  ---------------------------------------YIPNYNPREIIENLYRMMDGA 824

Query: 891  MMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-F 949
              +PM P+Y+ F G IE          Y + G I  +    + I ELPI  WTQ Y+E  
Sbjct: 825  DPKPMVPYYKNFKGVIESCGD----FRYIINGEISVIGPDKIEITELPIGTWTQTYKETV 880

Query: 950  LESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN 1006
            LE ++   D+  + I  +++Y+ DT V F + L+ + ++  +++GL K FKL TT++ ++
Sbjct: 881  LEPMLHGTDKTPATITDYKEYNTDTAVHFIIMLNRDKLLDLERDGLHKAFKLQTTMTVTS 940

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            M  FD    ++KYD+  QIL+ F+ +RLE Y KRK+     L+ E  KL N+ RFI+   
Sbjct: 941  MCAFDENQCLQKYDSVLQILKGFYKVRLEMYHKRKEYLEGILQAEASKLSNQARFIVEKC 1000

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFP--------KNSKSIEAVVAGATDETEESEENPE 1118
            +G IV+ N+KR D++ EL ++ +   P           + +E V     DET  S     
Sbjct: 1001 DGTIVIENKKRKDMIAELIRREYESDPVLAWKLSQNREEVLEEVAENVDDETVSS----- 1055

Query: 1119 VVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
                +   ++DYLL M + +LT EK   LL  +D    E+  L+  TP SLW +DLD L 
Sbjct: 1056 --TAITKENFDYLLGMTLWSLTKEKKDELLRQKDDKLAELKRLQARTPISLWKEDLDNLL 1113

Query: 1179 MQLDEL 1184
             +L+ L
Sbjct: 1114 NELNRL 1119


>gi|410945796|pdb|4GFH|A Chain A, Topoisomerase Ii-Dna-Amppnp Complex
          Length = 1103

 Score = 1066 bits (2758), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 564/1169 (48%), Positives = 764/1169 (65%), Gaps = 80/1169 (6%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL+KIFDEILVNA
Sbjct: 6    YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 65

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNYD
Sbjct: 66   ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 125

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM     P I+  K+G
Sbjct: 126  DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKKG 185

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG  + +++F  Y
Sbjct: 186  PSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 244

Query: 271  VDMYPKSV--TRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANH 328
            V++Y KS+  T  +ER+N RWE+   +S+  FQQ+SFVN IAT  GGTHV+Y+ +Q+   
Sbjct: 245  VELYLKSLIPTILYERINNRWEVAFAVSDISFQQISFVNSIATTMGGTHVNYITDQIVK- 303

Query: 329  VMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEE 388
             ++ + KK K  +VK+  +KN++++F+N LI+NPAF SQTKE LT R   FGS+CE+  E
Sbjct: 304  KISEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQLTTRVKDFGSRCEIPLE 363

Query: 389  FLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTL 448
            ++ K+  K+ +   +   A+  +S+            +    KLEDAN AG +   +CTL
Sbjct: 364  YINKI-MKTDLATRMFEIADANESR------------ITNYPKLEDANKAGTKEGYKCTL 410

Query: 449  ILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK 508
            +LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++Q+L N+EI  IKKI+GL+
Sbjct: 411  VLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQILKNAEIQAIKKIMGLQ 470

Query: 509  QGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGL 568
               +Y + KSLRYGHLMIMTDQ                            DHDGSHIKGL
Sbjct: 471  HRKKYEDTKSLRYGHLMIMTDQ----------------------------DHDGSHIKGL 502

Query: 569  LINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFYSMPDYEAWKESLGGNASS 626
            +INF+ S +P LL I  FL+EFITPI+K   T      ++FY+MPDYE W+E    +  +
Sbjct: 503  IINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYNMPDYEKWREE-ESHKFT 561

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            W  KYY    TS ++E +EYF N+  H K F      D + I+LAFSKKK + RK+WL Q
Sbjct: 562  WKQKYY----TSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWLRQ 617

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            +EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG KPGQRK+L+  FK+N  
Sbjct: 618  YEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCFKKNLK 677

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI LL PNG FGTR  GGKD
Sbjct: 678  SELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGTRATGGKD 737

Query: 807  AASAR-YIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGT 865
            AA+AR YI+T L+ +TR +F   DD L  Y+ ED + +EP WY+PI+P +LVNG+EGIGT
Sbjct: 738  AAAARXYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYLPILPMILVNGAEGIGT 797

Query: 866  GWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIE 925
            GWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+       + Y + G IE
Sbjct: 798  GWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEIEP----LRYRMYGRIE 853

Query: 926  EVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQYSDDTTVDFEVFLSEE 982
            ++ +  L I ELP R WT   +E+L   +  ND    +I+   +  DD  + F + LS E
Sbjct: 854  QIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEEQHDD-NIKFIITLSPE 912

Query: 983  SMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKK 1042
             M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +IL EF+++RLE+Y+KRK 
Sbjct: 913  EMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEILSEFYYVRLEYYQKRKD 972

Query: 1043 VQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAV 1102
               E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL   GF  F K  K     
Sbjct: 973  HMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELENLGFPRFNKEGKPYYG- 1031

Query: 1103 VAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
                      SEE    + G     Y+YLL M I +LT E+ Q LL  + +   E+++L 
Sbjct: 1032 ----------SEE----LYGT----YEYLLGMRIWSLTKERYQKLLKQKQEKETELENLL 1073

Query: 1163 KATPESLWVKDLDALDMQLDELDKSDARA 1191
            K + + +W  DL A ++   E  + DA A
Sbjct: 1074 KLSAKDIWNTDLKAFEVGYQEFLQRDAEA 1102


>gi|32478664|gb|AAP83584.1| DNA-topoisomerase II [Physarum polycephalum]
          Length = 1498

 Score = 1065 bits (2754), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/1213 (45%), Positives = 770/1213 (63%), Gaps = 127/1213 (10%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++EEMYQKK+ +EHILLRPD+YIGSI+   Q  W+  E    M +R   YVPGLYKIFDE
Sbjct: 318  SVEEMYQKKTPVEHILLRPDSYIGSIQHTHQEQWVINESDGRMEYRECKYVPGLYKIFDE 377

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRD KM+ ++V ID  +++IS+ N+G G+PV++H++E VYVPEL+ G LLT
Sbjct: 378  ILVNAADNKQRDHKMNVLQVTIDPANNIISILNNGKGIPVQLHEKEKVYVPELVLGTLLT 437

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
             SN+DD + K TGGRNG+GAKLTNIFST F +ETAD  R K Y+Q ++ NM +++EP+I 
Sbjct: 438  GSNFDDKIAKVTGGRNGFGAKLTNIFSTSFEVETADAARHKLYRQSWSENMSQRTEPSIE 497

Query: 206  KCK--EGDNWTKVSFKPDLAKFNMTHLED-DVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
                 +G ++T+++F PDLAKFNM  LE+ D++ LMK+R+ D+A CL  SV+V LNG  +
Sbjct: 498  HYSGPKGSDYTRITFSPDLAKFNMQSLENGDILRLMKRRIYDMAACL-PSVQVSLNGIPI 556

Query: 263  PVKSFAEYVDMY-------------------------------------PKSVTRFHERV 285
            P   F  YV MY                                     P      + ++
Sbjct: 557  P-SGFDAYVSMYQPKDAQPLSNAEDGAQNEQEEHGEGAEGTEGEQPGKQPTKHPFVYAKI 615

Query: 286  NERWEICV--TLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVK 343
            N+RW++ V  T+ EGQF QVSFVN IAT KGGTHV++VA QV   +   + KK  + + +
Sbjct: 616  NDRWQVAVGLTMLEGQFSQVSFVNSIATSKGGTHVNHVAEQVVKAIHERITKKYPDLDTR 675

Query: 344  AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETL 403
              +++N+L+VFVN LI+NPAFDSQTK+TLT R + FGS C+L + FLK++ A+  I++ +
Sbjct: 676  PAHIRNNLFVFVNCLIENPAFDSQTKDTLTTRPAHFGSACDLPDSFLKRIVAQVPIIDKV 735

Query: 404  LSWANFKQSKDLKKNDGTKTED---VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALA 460
            + WA  KQ  + +K+   K +D   ++ I KL+DAN AGG  S +CTLI+TEGDSAK+LA
Sbjct: 736  VGWAKLKQMAEFEKSSTRKPKDKAGIKAIPKLDDANFAGGPRSSECTLIITEGDSAKSLA 795

Query: 461  MAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKS-- 518
            ++GLS+VGRD++GVFPLRGKLLNVR+ S  +V+ N E+ +++ ILGL  G EY   +   
Sbjct: 796  VSGLSIVGRDKYGVFPLRGKLLNVRDQSPKRVMENEELKHLRMILGLTPGKEYRTAEDRA 855

Query: 519  -LRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFW 577
             LRYG +M+MTDQ                            DHDGSHIKGL +NF+  FW
Sbjct: 856  ELRYGKVMLMTDQ----------------------------DHDGSHIKGLFVNFMIQFW 887

Query: 578  PSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNA-SSWSIKYYKGLG 636
            PSLL+   FL +FITPIVKA +   +V +FY+  +YE W+  L  +  S W IKYYKGLG
Sbjct: 888  PSLLEQDGFLEQFITPIVKAFH-GAEVQTFYTTSEYEIWRSQLPDDQLSKWRIKYYKGLG 946

Query: 637  TSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQK 696
            TS+S+E +EYF+++  H+ +F W DD     +++AF K +   RK W         +D  
Sbjct: 947  TSSSQEAREYFKDLERHRIEFKW-DDTTTTKMDMAFGKDETAQRKTWAAAIPKDWFVDYT 1005

Query: 697  EKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSG 756
             K + YSDFV+KEL+ F  A   R+IPS+VDGLKPGQRK+L+ SFKR   +E KVAQ +G
Sbjct: 1006 VKNLTYSDFVDKELVQFCRAANARAIPSVVDGLKPGQRKVLYASFKRGLTQEMKVAQLAG 1065

Query: 757  YVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTR 816
            YV+EH+AYHHGE+SL  TI+ MAQDFVG+NN+ LL P+GQFGTR QGGKDAASARYIFT+
Sbjct: 1066 YVAEHTAYHHGEESLHGTIVNMAQDFVGANNLPLLLPSGQFGTRLQGGKDAASARYIFTK 1125

Query: 817  LSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNP 876
            L+P+TR +FP  DD +L+YL  DG +I+P ++ PIIP VLVNGSEG+G GW + IP YNP
Sbjct: 1126 LAPLTRTIFPDLDDPVLNYLEGDGDRIQPEFFAPIIPMVLVNGSEGLGMGWRTSIPMYNP 1185

Query: 877  RDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEV-NETTLRIK 935
             +++ N+ RLL+ E MEP+ PWY+GF G++E T       T+   G+IE    E   +I 
Sbjct: 1186 TNLIDNLLRLLHNEPMEPLTPWYKGFKGSVELTPP----FTFKTYGVIEPTKKEHIFKIS 1241

Query: 936  ELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFL---SEESMMRTKQE 990
            ELP+R+WT DY+E L + +  ++    ++ F +Y+ D  VDFEV     +E   +    +
Sbjct: 1242 ELPVRKWTNDYKELLTTYVKPEKGKPTLKDFSEYNTDQKVDFEVTFPRGAEAKPIPQNAQ 1301

Query: 991  GLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLEL 1050
             LLK  +L +T     M LFD  G IK+Y  P  I+ +FF +R+E+Y KRK  + + LE 
Sbjct: 1302 DLLKLLRLESTFFM-KMVLFDRHGAIKEYMDPLDIIRDFFEVRMEYYAKRKAAREKVLEN 1360

Query: 1051 ELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDET 1110
            E  +L +K++F+  V++G + +  R + +L  +L + G                      
Sbjct: 1361 EAKRLGDKLKFVKLVISGSLKLFGRSKAELRQDLVKSGLG-------------------- 1400

Query: 1111 EESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLW 1170
                      NG     Y+ LLS+A+  LT EK + L   + + + E+ + R+ +  ++W
Sbjct: 1401 ----------NG-----YENLLSIALDDLTKEKTEQLAHAKQRKDAELAETRRTSAAAMW 1445

Query: 1171 VKDLDALDMQLDE 1183
              +L AL  +LD+
Sbjct: 1446 EHELRALRDKLDK 1458


>gi|453086165|gb|EMF14207.1| type II DNA topoisomerase [Mycosphaerella populorum SO2202]
          Length = 1718

 Score = 1065 bits (2753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 566/1177 (48%), Positives = 779/1177 (66%), Gaps = 69/1177 (5%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            + YQK +QLEHIL RPDTYIGS+E  T+ LWIY  E+  M +R +SYVPGLYKIFDEILV
Sbjct: 142  QQYQKLTQLEHILKRPDTYIGSVEYTTELLWIYNSETDCMENRKVSYVPGLYKIFDEILV 201

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NAADNKQRD  M  ++V +D E   ISV N+G G+PVE+H +EG+++PE+IFGHLLTSSN
Sbjct: 202  NAADNKQRDKNMSELRVTVDAEKGEISVKNNGRGIPVEMHDKEGIWIPEMIFGHLLTSSN 261

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            YDD+  K TGGRNGYGAKLTNI+STEF +ET D K  +KY Q +  NM    +  I+K K
Sbjct: 262  YDDDEAKVTGGRNGYGAKLTNIYSTEFKLETVDSKTKQKYSQTWRKNMSIMEKAKITKVK 321

Query: 209  EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
             GD++T+++FKPD +KF M  ++ D   L+K+RV D+AG   K VKV LNG R+ +  F 
Sbjct: 322  -GDDYTEITFKPDFSKFGMDKMDADFEGLVKRRVYDMAGT-AKGVKVYLNGERIKITKFK 379

Query: 269  EYVDMYPKSVTR--------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKG 314
            +Y++MY K++                  +  +ERWEI   +S+G FQQVSFVN IAT  G
Sbjct: 380  QYMEMYTKAIKTENVANDGAAPEQVILTDNPHERWEIGFAVSDGSFQQVSFVNSIATTNG 439

Query: 315  GTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            GTHV+Y+A+Q+ + +  +VNKKNK    +K   ++NH+++FVNALI NPAF SQTKE LT
Sbjct: 440  GTHVNYIADQICDRLEQIVNKKNKGGVKLKKAQLRNHIFLFVNALIVNPAFTSQTKEQLT 499

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLE 433
             + S+FGSK +++E+FLK + A + +V  +L +A  K  K L K+DG + + +   SKL 
Sbjct: 500  TKVSAFGSKPQVTEKFLKAI-ANTEVVTNILHFAQQKADKVLSKSDGNRRQRMNH-SKLT 557

Query: 434  DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            DAN AG ++   CTLILTEGDSA  LA+AG +VV  D FGVFPLRGK+LNVR+AS +Q+ 
Sbjct: 558  DANKAGTKDGHMCTLILTEGDSAALLALAGRAVVNPDLFGVFPLRGKVLNVRDASVDQIS 617

Query: 494  NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
             N+EI NIKK +GL+   +Y + K LRYGH+MIMTDQ                       
Sbjct: 618  KNAEIQNIKKFIGLQHKKQYTDTKGLRYGHIMIMTDQ----------------------- 654

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV----LSFYS 609
                 DHDGSHIKGLLINF+   +PSLL++  FL+EFITPIVK    + K       F++
Sbjct: 655  -----DHDGSHIKGLLINFLQVQYPSLLRLKGFLLEFITPIVKVWKGDPKKPKAKHDFFT 709

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MP+YE W+E   G+   W  KYYKGLGTS +++ + YF ++  H K F    D + E I+
Sbjct: 710  MPEYEKWREQ-PGHIKGWEHKYYKGLGTSDTRDAQIYFNDLDRHLKRFHEMQDHEEELID 768

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKY-IKYSDFVNKELILFSMADLQRSIPSMVDG 728
            LAFSKK+ +ARK WL  F PG +LD      I Y DF+NKELILFSMAD  RSIPS++DG
Sbjct: 769  LAFSKKRADARKTWLQGFVPGTYLDMSSTDDITYDDFINKELILFSMADNLRSIPSVIDG 828

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
            LKPGQRK+++ +F+RN  K+ KV + +G VS  +AY +G+ SL  TI+ +AQ+FVGSNN+
Sbjct: 829  LKPGQRKVMYTAFRRNLKKDIKVVELAGLVSGLTAYAYGDASLQQTIVALAQNFVGSNNM 888

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            N+L+P+G FG+R QGG DAASARYI+TRLSP  R +F   D+ LL    +DG++IEP  Y
Sbjct: 889  NILEPSGNFGSRLQGGSDAASARYIYTRLSPFARHIFDPKDEPLLKPNLDDGKEIEPELY 948

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVAN-VRRLLNG---EMMEPMHPWYRGFGG 904
             PI+P +L+NG+EGIGTGWS+ IP +NP D++ N + R+  G   E M PM PWYRG+ G
Sbjct: 949  FPIVPMILINGAEGIGTGWSTSIPCHNPDDVINNLIARMQPGATKESMTPMLPWYRGWTG 1008

Query: 905  TIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIR 962
              E+ + +     Y   G I +   + + I ELP+ +WTQD++E LE II  ++  SFI+
Sbjct: 1009 QTEQLSEER----YKFPGRIAKTGNSEVEITELPVHQWTQDFKEKLEDIIKAEKTPSFIK 1064

Query: 963  GFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTP 1022
             + +Y+   TV F +   +E +++  +  L + FKL+ T +TSN+  FD  G I KY T 
Sbjct: 1065 DYTEYNTPETVHF-IIKMDEKILQENESKLEELFKLSKTQATSNLVAFDQHGRIHKYATT 1123

Query: 1023 EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLL 1082
              I+EEF+  R + Y +RK++ LE +  ELLKL N+  F+  +++G++VV+ +K++ L+ 
Sbjct: 1124 LDIMEEFYLHRHDAYIERKRMMLEKMGQELLKLNNQAMFVKMIIDGKLVVSKKKKSVLVQ 1183

Query: 1083 ELRQKGFTPFPKNSKSIEAVVAGATDETEE--SEENPEVVNGVQSIDYDYLLSMAIGTLT 1140
            EL   GF  FP   K ++A  AG T++  E  ++++ +      + D+DYLL MAI +LT
Sbjct: 1184 ELSDLGFARFP---KVVDAKKAGETEDAMEDDNDDSDDATTAAGAGDFDYLLGMAIWSLT 1240

Query: 1141 LEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
             E+V  L+       EE+DDL + + + LW  DL AL
Sbjct: 1241 QERVDKLIKQVGDKEEEIDDLTRKSVQDLWQSDLQAL 1277


>gi|367053477|ref|XP_003657117.1| DNA topoisomerase 2-like protein [Thielavia terrestris NRRL 8126]
 gi|347004382|gb|AEO70781.1| DNA topoisomerase 2-like protein [Thielavia terrestris NRRL 8126]
          Length = 1705

 Score = 1063 bits (2750), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 573/1206 (47%), Positives = 786/1206 (65%), Gaps = 87/1206 (7%)

Query: 13   NNANVVGPTAP--NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIH 70
            ++A +  P AP   K+  E YQK +QLEHI+ RPDTYIGS+E+  Q +W++ +  K M +
Sbjct: 107  DDAPIAKP-APKSTKSATETYQKLTQLEHIIKRPDTYIGSVERMDQKMWVFNKAEKLMEN 165

Query: 71   RTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQE 130
            RTISYVPGLYKIFDEILVNAADN QRD  M  +KV +D+    ISV N+G G+P+EIH++
Sbjct: 166  RTISYVPGLYKIFDEILVNAADNSQRDSSMTYLKVNVDRATGEISVENNGKGIPIEIHEK 225

Query: 131  EGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQ 190
            E  Y+PELIFGHLLT SNYDDN KKT GGRNGYGAKLTNIFS  F IE  D    K+YKQ
Sbjct: 226  EKCYIPELIFGHLLTGSNYDDNEKKTVGGRNGYGAKLTNIFSQRFTIELQDSHNEKRYKQ 285

Query: 191  VFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCL 249
             +T+NM K  +  I+  K  D + KVSF PD  +F M + ++DD+ AL+ +RV D+AG +
Sbjct: 286  TWTDNMSKMEKAKITTSKSSD-FVKVSFLPDYKRFGMENGIDDDLEALIYRRVYDMAGTV 344

Query: 250  GKSVKVELNGHRVPVKSFAEYVDMYPKSVT-----------------RFHE-RVNER-WE 290
               VKV LNG  + + +F  Y ++Y KS+                   F + R N R W+
Sbjct: 345  S-GVKVWLNGEHLKI-NFKTYCELYAKSIANERGDAAVDGEKPVAKVEFDQVRDNGRLWQ 402

Query: 291  ICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNH 350
            I  T+S+G FQQVSFVN IAT  GGTHV+Y+A+Q+   +   +NKK K  ++K  + +NH
Sbjct: 403  IGFTVSDGSFQQVSFVNNIATTSGGTHVNYIADQICEALGKELNKKKKGHSLKPSHFRNH 462

Query: 351  LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFK 410
            +++F+N LIDNP+F+SQTKE LT + S+FGSKC LS++FLKKV A   I   ++ +A+ K
Sbjct: 463  IFIFINCLIDNPSFNSQTKEQLTTKISAFGSKCVLSDQFLKKVKASEAIA-NIMEFADRK 521

Query: 411  QSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD 470
              K + K+DG K   +    KL DAN AG +   +CTLILTEGDSA+ LA+AG +V+  D
Sbjct: 522  ADKMMAKSDGNKRSRISN-DKLIDANWAGTKRGHECTLILTEGDSARGLAVAGRAVLDPD 580

Query: 471  RFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQ 530
            R GVFPLRGK+LNVR+AS +Q++ N EI NIKK LGLK   EY + K LRYGHLMIM DQ
Sbjct: 581  RIGVFPLRGKMLNVRDASIDQIMKNKEIENIKKFLGLKHKQEYKDTKGLRYGHLMIMADQ 640

Query: 531  VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
                                        D DGSHIKGLLINF+   +PSLL+I  F  EF
Sbjct: 641  ----------------------------DLDGSHIKGLLINFLEVQFPSLLRIDDFFQEF 672

Query: 591  ITPIVKATNKNG-----KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKE 645
            ITP+VK    N       + +F+++P YEAWKE        W+ KY KGLG+S++++ + 
Sbjct: 673  ITPVVKVWQGNNPKKPQNLKTFFNIPQYEAWKEEHKSQLRKWNYKYLKGLGSSSNEDAQI 732

Query: 646  YFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDF 705
            YF+++  H K F     ++ +  ELAFSKKK +ARK+WL  F PG +LD       Y+DF
Sbjct: 733  YFKDLDRHLKKFEVLKPEESQLFELAFSKKKADARKEWLGNFIPGTYLDSTASRKTYTDF 792

Query: 706  VNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYH 765
            V KELILFSMAD  RSIPSM+DGLKPGQRK+++ +FKRN +K+ KVA+ +GY+SE +AYH
Sbjct: 793  VQKELILFSMADNMRSIPSMIDGLKPGQRKVIYGAFKRNLVKDQKVAELAGYISEVAAYH 852

Query: 766  HGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLF 825
            HGEQSL  TI+G+AQ++VGSNN+N L+P+G FG+R  GG DAASARYI TRLSP  R +F
Sbjct: 853  HGEQSLQQTIIGLAQNYVGSNNVNCLEPSGNFGSRLAGGSDAASARYIHTRLSPFARRVF 912

Query: 826  PKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRR 885
             K D+  L+Y  +DG  IEP  Y+P+IP VLVNG++GIGTGWS+ IPNY+P +IV N++R
Sbjct: 913  SKLDEPNLEYQFDDGNMIEPKVYVPVIPMVLVNGADGIGTGWSTSIPNYHPLEIVENLKR 972

Query: 886  LLNGEM---------MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGII--EEVNETTLRI 934
             + G +          +PM PW+RG+ G +E          +   GII  +E N   + +
Sbjct: 973  RM-GRLDPADPEEKPFKPMTPWFRGWKGVVEPDGPNR----FKFNGIIKQDEQNPNEIHV 1027

Query: 935  KELPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGL 992
             ELPIR WT D++  LE II  ++  SFI+ +R+++D   V F + + ++ +     EGL
Sbjct: 1028 TELPIRMWTDDFKSRLEDIIRAEKTPSFIKDYREFNDHQNVHFVIEMEDKHLKAALDEGL 1087

Query: 993  LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
            L+KFKLT TI+T+N+  F+++G I+KY++PE+I+EE++H RL+ Y +RK   L     + 
Sbjct: 1088 LEKFKLTKTITTTNLVAFNTRGQIQKYESPEEIMEEYYHYRLKMYTERKTHWLGVYHADY 1147

Query: 1053 LKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF-PKNSKSIEAVVAGATDET- 1110
             KL+N+ RF+  ++  ++VVN +K+  L+ ELR + +  F P++ K ++     +TDE  
Sbjct: 1148 RKLQNQYRFVSEIIENKLVVNKKKKAVLVQELRDRKYEAFPPRDDKKVK-----STDEEL 1202

Query: 1111 -EESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESL 1169
             ++  E  E      + DYDYLLSM I +LT E+++ L         E D+L   + + L
Sbjct: 1203 GKDDAEEEEDEASGGARDYDYLLSMPIWSLTNERLEKLKNQIAAKKAEYDELNALSEKDL 1262

Query: 1170 WVKDLD 1175
            WV+DLD
Sbjct: 1263 WVRDLD 1268


>gi|410945801|pdb|4GFH|F Chain F, Topoisomerase Ii-Dna-Amppnp Complex
          Length = 1099

 Score = 1063 bits (2748), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 563/1169 (48%), Positives = 761/1169 (65%), Gaps = 84/1169 (7%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL+KIFDEILVNA
Sbjct: 6    YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 65

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            ADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNYD
Sbjct: 66   ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 125

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM     P I+  K+G
Sbjct: 126  DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKKG 185

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG  + +++F  Y
Sbjct: 186  PSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 244

Query: 271  VDMYPKSV--TRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANH 328
            V++Y KS+  T  +ER+N RWE+   +S+  FQQ+SFVN IAT  GGTHV+Y+ +Q+   
Sbjct: 245  VELYLKSLIPTILYERINNRWEVAFAVSDISFQQISFVNSIATTMGGTHVNYITDQIVK- 303

Query: 329  VMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEE 388
             ++ + KK K  +VK+  +KN++++F+N LI+NPAF SQTKE LT R   FGS+CE+  E
Sbjct: 304  KISEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQLTTRVKDFGSRCEIPLE 363

Query: 389  FLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTL 448
            ++ K+  K+ +   +   A+                 +    KLEDAN AG +   +CTL
Sbjct: 364  YINKI-MKTDLATRMFEIAS----------------RITNYPKLEDANKAGTKEGYKCTL 406

Query: 449  ILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK 508
            +LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++Q+L N+EI  IKKI+GL+
Sbjct: 407  VLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQILKNAEIQAIKKIMGLQ 466

Query: 509  QGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGL 568
               +Y + KSLRYGHLMIMTDQ                            DHDGSHIKGL
Sbjct: 467  HRKKYEDTKSLRYGHLMIMTDQ----------------------------DHDGSHIKGL 498

Query: 569  LINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFYSMPDYEAWKESLGGNASS 626
            +INF+ S +P LL I  FL+EFITPI+K   T      ++FY+MPDYE W+E    +  +
Sbjct: 499  IINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYNMPDYEKWREE-ESHKFT 557

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            W  KYY    TS ++E +EYF N+  H K F      D + I+LAFSKKK + RK+WL Q
Sbjct: 558  WKQKYY----TSLAQEVREYFSNLDRHLKIFHSLQGNDKDYIDLAFSKKKADDRKEWLRQ 613

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            +EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG KPGQRK+L+  FK+N  
Sbjct: 614  YEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGFKPGQRKVLYGCFKKNLK 673

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI LL PNG FGTR  GGKD
Sbjct: 674  SELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIYLLLPNGAFGTRATGGKD 733

Query: 807  AASAR-YIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGT 865
            AA+AR YI+T L+ +TR +F   DD L  Y+ ED + +EP WY+PI+P +LVNG+EGIGT
Sbjct: 734  AAAARXYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYLPILPMILVNGAEGIGT 793

Query: 866  GWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIE 925
            GWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+       + Y + G IE
Sbjct: 794  GWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEIEP----LRYRMYGRIE 849

Query: 926  EVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQYSDDTTVDFEVFLSEE 982
            ++ +  L I ELP R WT   +E+L   +  ND    +I+   +  DD  + F + LS E
Sbjct: 850  QIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEEQHDD-NIKFIITLSPE 908

Query: 983  SMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKK 1042
             M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +IL EF+++RLE+Y+KRK 
Sbjct: 909  EMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEILSEFYYVRLEYYQKRKD 968

Query: 1043 VQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAV 1102
               E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL   GF  F K  K     
Sbjct: 969  HMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELENLGFPRFNKEGKPYYG- 1027

Query: 1103 VAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
                      SEE    + G     Y+YLL M I +LT E+ Q LL  + +   E+++L 
Sbjct: 1028 ----------SEE----LYGT----YEYLLGMRIWSLTKERYQKLLKQKQEKETELENLL 1069

Query: 1163 KATPESLWVKDLDALDMQLDELDKSDARA 1191
            K + + +W  DL A ++   E  + DA A
Sbjct: 1070 KLSAKDIWNTDLKAFEVGYQEFLQRDAEA 1098


>gi|296476435|tpg|DAA18550.1| TPA: topoisomerase (DNA) II alpha 170kDa [Bos taurus]
          Length = 1338

 Score = 1061 bits (2743), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/1128 (50%), Positives = 751/1128 (66%), Gaps = 82/1128 (7%)

Query: 109  QEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLT 168
            +E++LIS+ N+G G+PV  H+ E +YVP LIFG LLTSSNYDD  KK TGGRNGYGAKL 
Sbjct: 76   RENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLTSSNYDDEEKKVTGGRNGYGAKLC 135

Query: 169  NIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMT 228
            NIFST+F +ETA  +  K +KQ + +NMGK  E  + K   G+++T ++F PDL+KF M 
Sbjct: 136  NIFSTKFTVETASREYKKMFKQTWMDNMGKAGEMEL-KPFSGEDYTCITFHPDLSKFKMQ 194

Query: 229  HLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTR 280
             L+ D+VALM +R  D+AG   K VKV LNG+R+PVK F  YVD+Y K         +  
Sbjct: 195  SLDKDIVALMVRRAYDIAGST-KDVKVYLNGNRLPVKGFRSYVDLYLKDKVDETGNPLKV 253

Query: 281  FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA 340
             HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG HVDYVA+Q+   ++ VV KKNK  
Sbjct: 254  IHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRHVDYVADQIVTKLVDVVKKKNKGG 313

Query: 341  -NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGI 399
              VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+  SFGS C+LSE+F+K      GI
Sbjct: 314  VAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQVKSFGSTCQLSEKFIKAAIG-CGI 372

Query: 400  VETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKA 458
            VE++L+W  FK    L KK    K   ++GI KL+DAN AGGRNS +CTLILTEGDSAK 
Sbjct: 373  VESILNWVKFKAQIQLNKKCSAVKHNRIKGIPKLDDANDAGGRNSTECTLILTEGDSAKT 432

Query: 459  LAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEY---NN 515
            LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N+EI NI KI+GL+    Y   ++
Sbjct: 433  LAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYEDEDS 492

Query: 516  VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHS 575
            +K+LRYG +MIMTDQ                            D DGSHIKGLLINFIH 
Sbjct: 493  LKTLRYGKIMIMTDQ----------------------------DQDGSHIKGLLINFIHH 524

Query: 576  FWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGL 635
             WPSLL+   FL EFITPIVK + KN + ++FYS+P++E WK S   N   W +KYYKGL
Sbjct: 525  NWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPEFEEWKSSTP-NHKKWKVKYYKGL 581

Query: 636  GTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE------- 688
            GTSTSKE KEYF ++  H+  F +   +D  AI LAFSKK+ + RK+WL  F        
Sbjct: 582  GTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQTDDRKEWLTHFMEDRRQRK 641

Query: 689  ----PGNHL-DQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
                P ++L  Q   Y+ Y+DF+NKELILFS +D +RSIPSMVDGLKPGQRK+LF  FKR
Sbjct: 642  LLGLPDDYLYGQATTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCFKR 701

Query: 744  NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
            N  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ+FVGSNN+NLLQP GQFGTR  G
Sbjct: 702  NDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRLHG 761

Query: 804  GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
            GKD+AS RYIFT LSP+ R LFP  DD  L +L +D Q++EP WY+PIIP VL+NG+EGI
Sbjct: 762  GKDSASPRYIFTMLSPLARLLFPAKDDHTLKFLYDDNQRVEPEWYIPIIPMVLINGAEGI 821

Query: 864  GTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGI 923
            GTGWS  IPN++ R++V N+RRL++GE   PM P Y+ F GT+E+ A  +    Y ++G 
Sbjct: 822  GTGWSCKIPNFDVREVVNNIRRLMDGEEPLPMLPSYKNFKGTVEELAPNQ----YVISGE 877

Query: 924  IEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFL 979
            +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++    I  +R+Y  DTTV F V +
Sbjct: 878  VAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEKTPPLITDYREYHTDTTVKFVVKM 937

Query: 980  SEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEK 1039
            +EE +   ++ GL K FKL T+++ ++M LFD  G +KKYDT   IL +FF +RL++Y  
Sbjct: 938  TEEKLAEAERAGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTVLDILRDFFELRLKYYGL 997

Query: 1040 RKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP------ 1093
            RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ + +L+  L Q+G+   P      
Sbjct: 998  RKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIKVLIQRGYDSDPVKAWKE 1057

Query: 1094 ---KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLAD 1150
               K     E   + +  ETE+S+   +         ++YLL M +  LT EK   L   
Sbjct: 1058 AQQKVPDEEENEESDSEKETEKSDSATD-----SGPTFNYLLDMPLWYLTKEKKDELCKL 1112

Query: 1151 RDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKI 1198
            R++  +E++ L++ +P  LW +DL A   +L E + ++   +E+ M++
Sbjct: 1113 RNEKEQELETLKRKSPSDLWKEDLAAFVEEL-ESENTEGSPQEDGMEM 1159


>gi|403222061|dbj|BAM40193.1| DNA topoisomerase 2 [Theileria orientalis strain Shintoku]
          Length = 2103

 Score = 1060 bits (2742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 564/1182 (47%), Positives = 785/1182 (66%), Gaps = 75/1182 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+EE YQKKSQLEHILLRPDTYIGS E +TQ +W+++E+ K M++  I YVPGLYKIFD
Sbjct: 5    KTVEERYQKKSQLEHILLRPDTYIGSTEMNTQQMWVFDEKKKRMVYENIDYVPGLYKIFD 64

Query: 85   EILVNAADNKQR---DP---KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
            E+LVNAAD   R   DP   KM  +KV ID E   I V N G+ +P++IH E  +YVP+L
Sbjct: 65   ELLVNAADVYARQLSDPSLEKMTCIKVTIDTETGAIVVFNDGEPIPIQIHSEHNMYVPQL 124

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            IFG LLTS NYDD+ ++ TGGRNG+GAKL NIFS  F +  A+ K  KK+K  +  NM K
Sbjct: 125  IFGELLTSDNYDDSEERVTGGRNGFGAKLANIFSKTFTVVVANKKMKKKFKMTWCENMRK 184

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
               P   +  +G ++ K++F PD  KFN+  ++   + ++KKRV D+AG  G  VKV LN
Sbjct: 185  TKGPAKVEPYQGQDFVKITFLPDYEKFNLKQIDPGTLKVLKKRVYDVAGTTG--VKVYLN 242

Query: 259  GHRVPVKSFAEYVDMY----PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKG 314
              R+ +K F EYV++Y         + H+++  RWE+ V+ SE  F+QVSFVN I TIKG
Sbjct: 243  NERIKIKDFKEYVNLYLPEDASETVKVHDKM-YRWEVVVSGSEEGFRQVSFVNSINTIKG 301

Query: 315  GTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            GTHV +V + +   +   VN KNK    +K + +KNH+++F+N  I NP+FDSQTKETLT
Sbjct: 302  GTHVSHVVDPLVQSLSKKVNSKNKGGIELKPNQIKNHIFIFINCQIVNPSFDSQTKETLT 361

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN---DGTKTEDVRGIS 430
             +   FGSK  +SE+ L +V  +S IV+ +L+W + K + +LKK        ++ + GI 
Sbjct: 362  TKIIKFGSKYTMSEKALGQV-LRSKIVDNILNWLHEKTNIELKKKMKVSSKGSDKLFGIP 420

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KLEDAN AG R S +CTLILTEGDSAK   +AGLSVVGRD++GVFPL+GKLLNVREAS  
Sbjct: 421  KLEDANKAGTRFSMECTLILTEGDSAKTSCLAGLSVVGRDKYGVFPLKGKLLNVREASYK 480

Query: 491  QVLNNSEIGNIKKILGLK-QGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
            Q+  N E+ NI KI+GL        +   LRYG +MIMTDQ                   
Sbjct: 481  QLTQNVEVQNILKIMGLDISNKSREDSSGLRYGSVMIMTDQ------------------- 521

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYS 609
                     D+DGSHIKGLLIN  H+FWP L++   F+ EF+TP++K T+K G+VLSF++
Sbjct: 522  ---------DYDGSHIKGLLINLFHNFWPKLIQFNGFIREFVTPLIKVTSKAGQVLSFFT 572

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            M D+  WKE++  + +S+ IKYYKGLGTS+ KE KEYF N+  H  +F + D++D ++I+
Sbjct: 573  MEDFNRWKETV--DITSYKIKYYKGLGTSSDKEFKEYFSNLNRHLIEFNYVDNKDDDSID 630

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            +AFSKK+IE RK W+  +  GN +D   K ++YSDF+NKELI FS+ D +RSIPS++DG 
Sbjct: 631  MAFSKKRIEDRKNWMQNYTLGNTVDHSIKKLRYSDFINKELIQFSIYDTERSIPSVIDGF 690

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+LF  FKRN   E KVAQ +GY++EHSAYHHGE SL  TI+ MAQDFVGSNN+N
Sbjct: 691  KPGQRKVLFGCFKRNLKNECKVAQLTGYIAEHSAYHHGENSLQQTIVNMAQDFVGSNNLN 750

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL P GQFG+R +GGKDAA+ARYIFT+L+P+TR++F ++DD +LDY NE+GQ +EP +Y+
Sbjct: 751  LLLPCGQFGSRKEGGKDAAAARYIFTKLAPLTRYVFLQEDDPILDYQNEEGQLVEPFYYL 810

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PIIP VLVNGSEGIGTG+S+ +P YNP D++ N++  L  E M  M PWY+GF GTIE+ 
Sbjct: 811  PIIPMVLVNGSEGIGTGFSTNVPCYNPIDVIENIKNYLRNEEMFEMVPWYKGFKGTIERN 870

Query: 910  ASKEAGVTYTVTG---IIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN-------DS 959
            +     + + V G   + E++ + T  I ELPI RW  DYREFL S++ QN       D 
Sbjct: 871  SK----LGFDVVGKYKLSEDMRKLT--ITELPINRWINDYREFLNSLVSQNRGKEDEDDG 924

Query: 960  FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKY 1019
            +I  +  +S +  +D  V ++        +EG+ K FKL TTISTSNM LFDS   IK+Y
Sbjct: 925  YITDYSDFSSNEVIDIRVNINVNMAAEIMKEGVEKVFKLKTTISTSNMTLFDSSKRIKRY 984

Query: 1020 DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTD 1079
            ++  +IL+EF + R+++Y KR++  ++ L+++L +L N+VRFI  ++N E+V+  + +  
Sbjct: 985  ESELEILKEFINTRVKYYNKRREYLIKQLQVQLQQLSNQVRFINMIINNELVLFRKSKQQ 1044

Query: 1080 LLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            ++ EL++  F  F        ++ A    + EE +E  E+   ++   Y+YLL+M++ +L
Sbjct: 1045 IVNELKRLQFDQFS-------SLSAKDDYDKEEGQEADEL---LEKEGYNYLLNMSLLSL 1094

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL 1181
            ++E +  L  + +    ++  L   T   L+ +DLD L  QL
Sbjct: 1095 SIESINKLNNEYNSKQLQLKTLINTTSLQLYEQDLDQLKAQL 1136


>gi|367033261|ref|XP_003665913.1| DNA topoisomerase 2-like protein [Myceliophthora thermophila ATCC
            42464]
 gi|347013185|gb|AEO60668.1| DNA topoisomerase 2-like protein [Myceliophthora thermophila ATCC
            42464]
          Length = 1772

 Score = 1060 bits (2740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/1284 (45%), Positives = 803/1284 (62%), Gaps = 85/1284 (6%)

Query: 15   ANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTIS 74
            A V  P    K+  E YQK +QLEHI+ RPDTYIGS+E+  Q +W++ +  K M +RTIS
Sbjct: 102  APVSKPAGKPKSATETYQKLTQLEHIIKRPDTYIGSVERTDQKMWVFNKTEKLMENRTIS 161

Query: 75   YVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVY 134
            YVPGLYKIFDEILVNAADN QRD  M  +KV ID+E   ISV N+G G+PVEIH++E  Y
Sbjct: 162  YVPGLYKIFDEILVNAADNSQRDSSMTYLKVTIDRESGEISVENNGKGIPVEIHEKEQCY 221

Query: 135  VPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTN 194
            +PELIFGHLLT SNYDDN KKT GGRNGYGAKLTNIFS  F IE  D    K+YKQ +T+
Sbjct: 222  IPELIFGHLLTGSNYDDNEKKTVGGRNGYGAKLTNIFSQRFTIELQDSTNGKRYKQTWTD 281

Query: 195  NMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSV 253
            NMG   +  I   K  D + KV+F PD  +F M + ++DD+ AL+ +RV D+AG +    
Sbjct: 282  NMGNMEKAKIVSNKSSD-FVKVTFLPDYKRFGMENGIDDDLEALLYRRVYDMAGTVNFKT 340

Query: 254  KVELNGHRVPVKSFAEYVD-MYPKSVTRF-HERVNER-WEICVTLSEGQFQQVSFVNGIA 310
              E+    +  +     VD   P +   F  +R N R W++  T+S+G FQQVSFVN IA
Sbjct: 341  YCEMYAKAIANERGDAAVDGEKPAAKVEFDQQRSNGRLWQVGFTVSDGSFQQVSFVNNIA 400

Query: 311  TIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
            T  GGTHV+Y+A+Q+   +   +NKK K  ++K  + +NH+++F+N LIDNPAF SQTKE
Sbjct: 401  TTSGGTHVNYIADQICEALGKELNKKKKGHSLKPSHFRNHIFIFINCLIDNPAFTSQTKE 460

Query: 371  TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGIS 430
             LT + S+FGSKC+LS++FLKKV A   I   ++ +A+ K  K + K+DG K   +    
Sbjct: 461  QLTTKVSAFGSKCQLSDQFLKKVKASEAIA-NIMEFADRKADKMMAKSDGNKRSRISN-D 518

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KL DAN AG +   +CTLILTEGDSA+ LA+AG +V+  DR GVFPLRGK+LNVR+AS +
Sbjct: 519  KLIDANWAGTKRGHECTLILTEGDSARGLAVAGRAVLDPDRIGVFPLRGKMLNVRDASLD 578

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            Q++ N EI NIKKILGLK   +Y + + LRYGHLMIM DQ                    
Sbjct: 579  QIMKNKEIENIKKILGLKHKQDYKDTRGLRYGHLMIMADQ-------------------- 618

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG-----KVL 605
                    D DGSHIKGLLINF+   +PSLL++  F  EFITP+VK    N       + 
Sbjct: 619  --------DLDGSHIKGLLINFLEVQFPSLLRVEDFFQEFITPVVKVWQGNNPKKPQNLK 670

Query: 606  SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG 665
             F+++P YE WKE+       W  KY KGLG+S++++ + YF+++  H K F     ++ 
Sbjct: 671  MFFNLPQYETWKEAHKAELRRWKYKYLKGLGSSSNEDAQIYFKDLDRHLKKFDILKPEES 730

Query: 666  EAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSM 725
            + +ELAFSKKK +ARK+WL  F PG +LD        +DFV KELILFSMAD  RSIPSM
Sbjct: 731  QLLELAFSKKKADARKEWLGNFIPGTYLDSTMSRKTIADFVQKELILFSMADNMRSIPSM 790

Query: 726  VDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGS 785
            +DGLKPGQRK+++ +FKRN + + KVA+F+GYVSE +AYHHGE SL  TI+G+AQ +VGS
Sbjct: 791  IDGLKPGQRKVVYAAFKRNLVSDQKVAEFAGYVSEVAAYHHGEMSLQQTIIGLAQTYVGS 850

Query: 786  NNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEP 845
            NN+N L+P+G FG+R  GG DAASARYI TRLSP  R +F K D+  L+   +DG+ IEP
Sbjct: 851  NNVNCLEPSGNFGSRLSGGSDAASARYIHTRLSPFARRVFSKLDEPNLENQYDDGKMIEP 910

Query: 846  TWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM---------MEPMH 896
              Y+PIIP VLVNG++GIGTGWS+ IPNY+P DIV N++R + G +          +PM 
Sbjct: 911  KVYVPIIPMVLVNGADGIGTGWSTQIPNYHPLDIVENLKRRM-GRLDPNDPEEKPFKPMT 969

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGII--EEVNETTLRIKELPIRRWTQDYREFLESII 954
            PW+RG+ G +E          +   G+I  +E N   + + ELPIR WT D++  LE I+
Sbjct: 970  PWWRGWKGVVEPDGPNR----FKFNGVIKQDEQNPNEIHVTELPIRMWTDDFKSRLEEIL 1025

Query: 955  --DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDS 1012
              ++  SFI+ +R+++D  TV F + + ++ +     EGLL+KFKLT T++T+N+  F++
Sbjct: 1026 RAEKTPSFIKDYREFNDHQTVHFIIEMEDKHLKAALDEGLLEKFKLTKTVTTTNLVAFNT 1085

Query: 1013 KGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVV 1072
            +G I KY++PE+I+EEF+  R   Y +RKK  L     +  KL+N+ RF+  ++  ++VV
Sbjct: 1086 RGQIHKYESPEEIMEEFYQYRYNMYTERKKHWLGVYHADYRKLKNQYRFVSEIIENKLVV 1145

Query: 1073 NNRKRTDLLLELRQKGFTPF-PKNSKSIEAVVAGATDET--EESEENPEVVNGVQSIDYD 1129
            N +K+  L+ ELR + +  F PK  K ++     +TDE   ++  E+ +V +  +  DYD
Sbjct: 1146 NKKKKDVLVQELRDRKYEAFPPKEDKKVK-----STDEELGKDDAEDEDVSSDAR--DYD 1198

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL------DMQLDE 1183
            YLLSM I +LT E+++ L         E D+L   + + LWVKDLD         ++LDE
Sbjct: 1199 YLLSMPIWSLTNERLEKLKNQIAAKKAEYDELEALSEKDLWVKDLDEFVEEWHTQLKLDE 1258

Query: 1184 LDKSDARAEEERMKIK-GNGNGDAGPKIVAKRAPKNARK-NDKKSNNARATEAMGEMDNV 1241
               +  R    R   K G G G         R PK+  +   +K   ARA +        
Sbjct: 1259 EITTGIRRMGRRTSHKIGAGKG---------RRPKDDDEYQPEKKTKARAPKVEKVETKS 1309

Query: 1242 TKVVKPKGRAGLKKAPAEKLDDDE 1265
             +    K +A  K  P   L DD+
Sbjct: 1310 HERFTEKFQAATKPKPKNDLSDDD 1333


>gi|320593621|gb|EFX06030.1| DNA topoisomerase 2 [Grosmannia clavigera kw1407]
          Length = 1724

 Score = 1056 bits (2730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 570/1256 (45%), Positives = 793/1256 (63%), Gaps = 92/1256 (7%)

Query: 24   NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
            +KT  EMYQK +QLEHI+ RPDTYIGS+E   Q +W+Y + +  M  R IS+VPGLYKIF
Sbjct: 144  SKTASEMYQKLTQLEHIIKRPDTYIGSVEHAEQLMWVYNKATGQMEKRAISFVPGLYKIF 203

Query: 84   DEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            DEILVNAADNKQRDP M  +KV +D+    ISV N+G G+ +E+HQ+E VY+PEL+FGHL
Sbjct: 204  DEILVNAADNKQRDPSMSMLKVTVDRAAGEISVENNGKGIAIEMHQKEKVYIPELLFGHL 263

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LT SNYDDN K+T GGRNGYGAKL N+FSTEF +E  D    K+YKQ + NNM    +  
Sbjct: 264  LTGSNYDDNEKRTVGGRNGYGAKLCNVFSTEFTVECQDSASGKRYKQTWHNNMSVMDKAR 323

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
            I+  K  D + +V+FKPD  +F M + ++DD+ ALM +R+ D+AG +   VKV LNG  +
Sbjct: 324  ITANKSSD-FVRVTFKPDFERFGMPNGIDDDLEALMYRRIYDMAGVV-DGVKVFLNGEYL 381

Query: 263  PVKSFAEYVDMYPKSVTRFHE-------------------RVNERWEICVTLSEGQFQQV 303
             V  F +Y DMY K++ +  +                   + ++RW+I  T+S+G FQQV
Sbjct: 382  KV-GFKKYCDMYAKAIAKERDEEVTGEELPPAATVQFEDPKAHKRWQIGFTVSDGTFQQV 440

Query: 304  SFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPA 363
            SFVN IAT  GGTHV+Y+A+Q+ N ++A +NK+ K  ++K ++++NH+++FVN  IDNPA
Sbjct: 441  SFVNSIATTSGGTHVNYIADQICNALLADLNKRKKGHSLKLNHIRNHIFIFVNCFIDNPA 500

Query: 364  FDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKT 423
            F  QTKE +T + S+FG+KC L++ F+KK+ +   I   ++ +A  K  K + K+DG + 
Sbjct: 501  FTGQTKEQMTTKVSAFGTKCVLTDAFIKKIRSTDAI-NNIIHFAEKKADKMMSKSDGNRR 559

Query: 424  EDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLN 483
              +    KL DANLAG ++  +CTLILTEGDSA+ LA+AG +V+  DR GVFPLRGKLLN
Sbjct: 560  SRISN-DKLVDANLAGTKHGHECTLILTEGDSARGLAIAGRAVLDPDRIGVFPLRGKLLN 618

Query: 484  VREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFI 543
            VR+AS +Q+  N EI NIK+ LGLK    Y + KSLRYGHLMIM DQ             
Sbjct: 619  VRDASIDQITKNKEIQNIKQFLGLKHKQVYTDTKSLRYGHLMIMADQ------------- 665

Query: 544  LIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA-----T 598
                           DHDGSHIKGLLINF+   +PSLL IP F  EFITP+VK       
Sbjct: 666  ---------------DHDGSHIKGLLINFLQVQFPSLLLIPEFFQEFITPVVKVWQGPNP 710

Query: 599  NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFV 658
             K  K  +FY++P+YE WK++       W  KY KGLG+S++++ + YF N+  H K+F 
Sbjct: 711  KKPTKSKAFYTIPEYEEWKDAHHSEVKRWEHKYLKGLGSSSNEDAQVYFTNLDAHLKEFE 770

Query: 659  WEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADL 718
                 + +  +LAFSKKK +ARK+WL  F PG  LDQ  K I YSDFVNKELILFSMAD 
Sbjct: 771  TMQTDEAQLFDLAFSKKKADARKEWLGNFIPGTFLDQSTKSITYSDFVNKELILFSMADN 830

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
             RSIPS+VDGLKPGQRK+++   K+N +K+ KV + +G VS+ +AYHHG+ SL  TI+G+
Sbjct: 831  MRSIPSVVDGLKPGQRKVIYTCLKKNIVKDQKVFELAGSVSKLAAYHHGDASLHQTIVGL 890

Query: 779  AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
            AQ+FVGSNNIN L+P+G FG+R  GG DAASARYIFTRLSP  R +F   D+ +L+   +
Sbjct: 891  AQNFVGSNNINCLEPSGNFGSRLSGGSDAASARYIFTRLSPFARRVFNPLDEPVLENNID 950

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL-------NGEM 891
            +G  IEP  Y PI+P VL+NG++GIGTGWS+ IPNYNP D+V N++R +       N E+
Sbjct: 951  EGSVIEPKNYAPIVPMVLINGADGIGTGWSTSIPNYNPVDVVNNLKRRMGRLAGHENEEL 1010

Query: 892  -MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGII--EEVNETTLRIKELPIRRWTQDYRE 948
              E M PW+RG+ GT E  +       Y   GII  ++ N   + + ELP+R WT D++ 
Sbjct: 1011 PFESMIPWFRGWKGTPEPDS---VPGRYRFNGIIYQDDRNPNEIVVSELPVRMWTDDFKA 1067

Query: 949  FLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN 1006
             LE +I  +++ S+I+ +++++D   V F + + ++ +     EGL+ +FKL+ T+ T+N
Sbjct: 1068 KLEEVIRAEKSPSWIKDYKEFNDHRNVHFVIQMEDKHVQAAVDEGLIDRFKLSKTVGTTN 1127

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            +  FD  G I++Y+  E ILEEFF+ RL  Y  RKK  L     E  KL N+ RF+  ++
Sbjct: 1128 LVAFDINGQIRRYEKVEDILEEFFNYRLNMYGLRKKHWLGVYHTEFRKLNNQYRFVQEIM 1187

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI 1126
            +G++VV+ +K+  ++ ELR + +  FPK S    +    A  + ++  E+ + ++G  + 
Sbjct: 1188 DGKLVVSKKKKDVVVEELRARSYEAFPKES----SDPKKAKTKDDDDNEDEDEIDGGTAR 1243

Query: 1127 DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL------DMQ 1180
            DYDYLLSM I + T E++  L    D    + D+L   + + LW  DLD         +Q
Sbjct: 1244 DYDYLLSMPIWSFTQERLDRLKKQIDAKKAQYDELDVKSEKDLWCFDLDEFLAEWENQLQ 1303

Query: 1181 LD-ELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAM 1235
            LD E+  +  R      K  G G G        ++A  +    DKK   A    AM
Sbjct: 1304 LDSEIQTTIRRMGRRTSKKIGAGRG--------RKARADDEYTDKKPARAPKVAAM 1351


>gi|156088413|ref|XP_001611613.1| DNA topoisomerase II [Babesia bovis T2Bo]
 gi|154798867|gb|EDO08045.1| DNA topoisomerase II, putative [Babesia bovis]
          Length = 1437

 Score = 1053 bits (2723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/1273 (45%), Positives = 816/1273 (64%), Gaps = 83/1273 (6%)

Query: 22   APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
            A  KTIE+ YQKKSQLEHILLRPDTYIG+ E  TQ +W+Y +E+K M++  ++++PGLYK
Sbjct: 3    AKQKTIEQRYQKKSQLEHILLRPDTYIGNTEMLTQQMWVYNQEAKRMLYEPVTFIPGLYK 62

Query: 82   IFDEILVNAAD---NKQRDP---KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYV 135
            IFDEILVNAAD    +Q DP   +M  +KV  +     I+V N G+ +PVEIH+E  VYV
Sbjct: 63   IFDEILVNAADVHARQQSDPSLTRMTCIKVNFNATTGAITVFNDGEPIPVEIHKEHNVYV 122

Query: 136  PELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNN 195
            PE+IFG LLTS NYDD   + TGGRNG+GAKLTNIFS  F +  AD KR K++   + +N
Sbjct: 123  PEMIFGELLTSDNYDDEDGRITGGRNGFGAKLTNIFSKSFSVTCADSKRHKQFAMKWESN 182

Query: 196  MGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKV 255
            M + + P       G ++ KV+F PD  +F +  +++  + ++ KRV D+AG  G  ++V
Sbjct: 183  MTRVASPAKVGSYHGKDFVKVTFIPDYERFGIPTMDEGTLKVLLKRVYDVAGTTG--LRV 240

Query: 256  ELNGHRVPVKSFAEYVDMY---PKSVTRFHERVNERWEICVTLSEGQ-FQQVSFVNGIAT 311
              N  R+ +  F +YV +Y     +V + +++ + RWE+ V+ ++G  FQQVSFVN I T
Sbjct: 241  YWNDERLGISDFKQYVGLYFEDDPTVVKVYDKAH-RWEVMVSATDGSGFQQVSFVNNITT 299

Query: 312  IKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
            +KGG+HV +V   +   +   V  KNK+   +K + +KN++++FVN  I NP FDSQTKE
Sbjct: 300  LKGGSHVQHVLEPLVTALTNKVKSKNKDGVELKPYQIKNYIFLFVNCQIVNPTFDSQTKE 359

Query: 371  TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN-DGTKTED-VRG 428
            TLT + + FGSK  ++ + + ++  KS + E +LS+A  + + +LKK    TK  + + G
Sbjct: 360  TLTTKPAKFGSKYIMNPKAVAQI-LKSTLTERILSFAQGRLNIELKKKMKVTKAVNRLTG 418

Query: 429  ISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREAS 488
            I KLEDAN AG R++  CTLILTEGDSAK   +AGLSVVGRD +GVFPL+GKLLNVR+AS
Sbjct: 419  IPKLEDANNAGTRHARNCTLILTEGDSAKTSCLAGLSVVGRDNYGVFPLKGKLLNVRDAS 478

Query: 489  SNQVLNNSEIGNIKKILGLK-QGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
              Q++ N+EI NI KI+GL     E      LRYG +MIMTDQ                 
Sbjct: 479  YKQLVQNAEIQNILKIMGLDVSKKEQTTPDGLRYGSIMIMTDQ----------------- 521

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSF 607
                       D+DGSHIKGLLIN +H FWP +++   F+ EF+TPI+KAT K   VLSF
Sbjct: 522  -----------DYDGSHIKGLLINLLHYFWPKMIQCRGFIREFVTPIIKAT-KGDSVLSF 569

Query: 608  YSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA 667
            +++ DY  W +S   N + W IKYYKGLGTST KE KEYF NI  H  DF++ED+ D ++
Sbjct: 570  FTVQDYVRWVQST--NVAGWKIKYYKGLGTSTDKEFKEYFVNIQQHLIDFIYEDNADDDS 627

Query: 668  IELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVD 727
            I+LAF+KK+++ RK W+  +E G  +D   K ++Y+DF+NKELI FS+ D +RSIPS+VD
Sbjct: 628  IDLAFNKKRVDDRKLWMQSYEHGTTVDHSIKKLRYTDFINKELIQFSIYDTERSIPSVVD 687

Query: 728  GLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNN 787
            G KPGQRK+LF   KRN + E KVAQ +GYV+EHSAYHHGE SL  TI+ MAQ+FVGSNN
Sbjct: 688  GWKPGQRKVLFGCLKRNLVGECKVAQLTGYVAEHSAYHHGEASLQQTIINMAQNFVGSNN 747

Query: 788  INLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
            IN+L+P GQFG+R +GGKDA++ARYIFT+L+PITR +F ++DD +L+Y NE+GQ IEP +
Sbjct: 748  INVLEPCGQFGSRKEGGKDASAARYIFTKLNPITRLIFVEEDDNILEYQNEEGQTIEPMY 807

Query: 848  YMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIE 907
            Y+P IP VLVNGSEGIGTG+SS IPNYNP DI+ N++R LN   M+PM PWY  F G IE
Sbjct: 808  YIPTIPMVLVNGSEGIGTGFSSQIPNYNPLDIIDNLKRYLNNVDMKPMVPWYHKFTGEIE 867

Query: 908  KTASKEAGVTYTVTGIIEEVNET-TLRIKELPIRRWTQDYREFLESI---IDQNDSFIRG 963
               + + G  +   G  + ++E   L I ELPIR+WT DYR FLES+   ++  +  I G
Sbjct: 868  --PNDKGG--FDCLGNYQWLDENGLLEITELPIRKWTHDYRVFLESLEQGVNGKEPLILG 923

Query: 964  FRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPE 1023
            F   S   +V F + ++ E +     EG+ K FKL T+I+T+NM LFD+   +K+Y    
Sbjct: 924  FVDNSTHESVHFTLNVNPECIEEVINEGVDKVFKLRTSIATTNMTLFDANKKLKRYSNEL 983

Query: 1024 QILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLE 1083
            +I+ +F  +RL  YEKRK   + NL+L L ++ N+VRFI  VVN E+V+  + +  L+ E
Sbjct: 984  EIIRDFAAVRLATYEKRKTYLINNLKLLLRRISNQVRFIHMVVNEELVLFKKAKATLVAE 1043

Query: 1084 LRQKGFTPFPKNSKSIEAVVAGATDETEESEE-NPEVVNGVQ---SIDYDYLLSMAIGTL 1139
            LR  GF        S   ++ G+ + +  +E   P   +G Q     DY+YLL+M + +L
Sbjct: 1044 LRDLGF-------DSNTDILKGSEEPSTLNEPVTPSRRSGTQDAPGADYNYLLNMPLWSL 1096

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM------QLDELDKSD----A 1189
            TLE+VQ L  +  +   ++  L + T   +W+ DL+ +++      Q DE+        A
Sbjct: 1097 TLEQVQKLNEEHAQKENQLRILLETTATDMWMDDLNKVEVAIKMAYQQDEITAPTPSHAA 1156

Query: 1190 RAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARA--TEAMGEMDNVTKVVKP 1247
              +  ++K K + +  +     A ++P ++R N    +N R+  +++  E  +V+ +   
Sbjct: 1157 LMQLTKIKRKASQSQRSTATPKATQSPPSSRGNSTSRSNKRSKYSDSSSEFSDVSMLSDD 1216

Query: 1248 KGRAGLKKAPAEK 1260
            +   GL K P ++
Sbjct: 1217 E---GLFKKPKQR 1226


>gi|254570861|ref|XP_002492540.1| Essential type II topoisomerase [Komagataella pastoris GS115]
 gi|238032338|emb|CAY70361.1| Essential type II topoisomerase [Komagataella pastoris GS115]
          Length = 1344

 Score = 1051 bits (2717), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 579/1293 (44%), Positives = 799/1293 (61%), Gaps = 146/1293 (11%)

Query: 9    LTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTM 68
            +  S N      TA N  + + YQK SQLEHIL RPDTYIGS+EKH    WIY +E+++M
Sbjct: 45   VNNSENGTTRSSTANNVNVSDQYQKLSQLEHILKRPDTYIGSVEKHESEQWIYNKETESM 104

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIH 128
              + +S VPGL+KIFDEILVNAADNK RDP M  ++V I  E +LI V N G        
Sbjct: 105  ERKVVSIVPGLFKIFDEILVNAADNKIRDPSMKNIEVTIKPEENLIEVKNDGK------- 157

Query: 129  QEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKY 188
                    ELIFG+LLTSSNY+D+ KK TGGRNGYGAKL NIFSTEFI+ET D    K Y
Sbjct: 158  --------ELIFGNLLTSSNYNDDQKKVTGGRNGYGAKLCNIFSTEFIVETYDKSSGKLY 209

Query: 189  KQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGC 248
             Q ++ NMGK  +P I   K+   +TKVSF+PDLAKFNMT L++D++ ++++RV DL G 
Sbjct: 210  TQRWSQNMGKTDKPVIKSIKKATEYTKVSFRPDLAKFNMTELDEDILGVLRRRVFDLCGS 269

Query: 249  LGKSVKVELNGHRVPVKSFAEYVDMYPKSV-------------------------TRFHE 283
            + + + V+LNG ++ +++F +YV+MY K++                         T  ++
Sbjct: 270  V-RDISVKLNGEKLKIRNFKQYVEMYVKALEHKNDPIKTEDSSLLPPPSSSSPSQTIVYQ 328

Query: 284  RVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVK 343
             +N+RWEI   +S+  F QVSFVN IAT  GGTHV+++A+Q+   +   +  KNK A +K
Sbjct: 329  TLNDRWEIAFAVSDSTFNQVSFVNSIATTSGGTHVNFIADQIVKKIEKEIKTKNKKAMIK 388

Query: 344  AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSK-CELSEEFLKKVTAKSGIVET 402
               +KN++++F+N L++NPAF SQTKE LT R S FG K  E+ ++F+KK+  ++GIV+ 
Sbjct: 389  PFQIKNNMFLFINCLVENPAFTSQTKEQLTTRASQFGGKKTEVPDDFIKKIL-RTGIVDA 447

Query: 403  LLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMA 462
            +L  A     K LKKNDG++   + G  KLEDAN AG +   +CTLILTEGDSA +LA+A
Sbjct: 448  ILDIAAMNADKALKKNDGSRKNRITGYPKLEDANKAGTKEGYKCTLILTEGDSASSLAVA 507

Query: 463  GLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLR 520
            GL+VVGRD +GV+PLRGK+LNVREAS++Q++ N+EI  IK+I+G +    Y   N+ SLR
Sbjct: 508  GLAVVGRDYYGVYPLRGKMLNVREASADQIMKNAEIQAIKQIMGFQHKKNYTPENINSLR 567

Query: 521  YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
            YGH+MIMTD                            QDHDGSHIKGL+INF+ S +P L
Sbjct: 568  YGHIMIMTD----------------------------QDHDGSHIKGLIINFLESSFPGL 599

Query: 581  LKIPSFLVEFITPIVKATNKNG----KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
            LK+P+FL+EFITPIVK T  +G    KV+ FYSMP+YEAW+E    N  S+  KYYKGLG
Sbjct: 600  LKVPNFLLEFITPIVKVTITSGPEKRKVIPFYSMPEYEAWREQ---NTESFKQKYYKGLG 656

Query: 637  TSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQK 696
            TS ++E +EYF  +  H K F    D D   I+LAFSKKK + RK+WL  FEPG HLD  
Sbjct: 657  TSLAEEMREYFSQLDKHMKTFHALQDVDPGFIDLAFSKKKADDRKEWLRGFEPGVHLDPD 716

Query: 697  EKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSG 756
               I  SDF+NKELILFSMAD  RSIPSM+DG KP QRKIL+  +KRN   E KV+Q +G
Sbjct: 717  LSIIPISDFINKELILFSMADNIRSIPSMLDGFKPSQRKILYGCYKRNLRSEIKVSQLAG 776

Query: 757  YVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTR 816
            Y+ EHSAYHHG+QSL  +I+G+AQDFVGSNN+NLLQP G FG+R QGGKDA++ARYIFT 
Sbjct: 777  YIGEHSAYHHGDQSLIQSIIGLAQDFVGSNNLNLLQPIGGFGSRAQGGKDASAARYIFTD 836

Query: 817  LSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNP 876
            LS IT+  F                                   +GIGTGWS+ IP +NP
Sbjct: 837  LSKITKKNF---------------------------------SCQGIGTGWSTNIPPFNP 863

Query: 877  RDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKE 936
             DIVAN+RRL++G+ ME M PWYRG+ G+I K ++ +    + + G IE++++ T+ I E
Sbjct: 864  VDIVANIRRLMDGQEMEEMIPWYRGWNGSITKISADK----FRMEGNIEQIDDETIEITE 919

Query: 937  LPIRRWTQDYREFLESII---DQNDSFIRGF-RQYSDDTTVDFEVFLSEESMMRTKQEGL 992
            +P + WT + +EFL + I   ++  S+I+    Q+  D  + F + L++E M ++ Q GL
Sbjct: 920  IPAKTWTINMKEFLLNGIAGSEKQKSWIKDMEEQHGMD--LKFVITLTKEEMKKSLQMGL 977

Query: 993  LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
             ++FKL TTI+  NM  FD+ G IKKYD   +I+E+++H+RL+FY++RK    E L  +L
Sbjct: 978  KERFKLITTINVGNMVAFDAAGKIKKYDNVNEIIEDYYHVRLDFYQRRKDHLAEVLGNQL 1037

Query: 1053 LKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSI------EAVVAGA 1106
             K+ ++ RF+  ++  E+ VNNRKR +L+ EL++  F  F K+ K I      E +    
Sbjct: 1038 EKISSQARFVKMIIENELRVNNRKRIELIEELQRLNFPKFSKDGKPIWQQVDQEEITEAE 1097

Query: 1107 TDETEESEENPEVVNGV-QSID----YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
                EE EE  +  N + +S++    YDYLL M I +LT E+   LL  + +  +++ +L
Sbjct: 1098 IKVEEEEEEEIDDENLLNKSVNIFASYDYLLGMPIWSLTRERYHKLLLQKAEKEDQLTEL 1157

Query: 1162 RKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNG------------NGDAGPK 1209
             K + + +W KDL+    +     K D        K  G              N +  P 
Sbjct: 1158 LKLSAKQIWNKDLEVFLEEWHAFLKEDEEKRASSFKKSGPAAKKKRVRRVKKENDENDPD 1217

Query: 1210 IVAKRAPKNARKNDKKSNNARATEAMGEMDNVT 1242
              +K+    A+K        ++   MG + ++T
Sbjct: 1218 FGSKKPKTVAKKVLNPKTKPKSASLMGSLSDIT 1250


>gi|225555588|gb|EEH03879.1| DNA topoisomerase II [Ajellomyces capsulatus G186AR]
          Length = 1716

 Score = 1045 bits (2703), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/1090 (49%), Positives = 717/1090 (65%), Gaps = 84/1090 (7%)

Query: 120  GDGVPVE----IHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEF 175
            G  VP E      ++E VY+PEL+FGHLL+SSNYDDN +K TGGRNGYGAKL NIFST+F
Sbjct: 127  GATVPKENSEKYQKKEKVYIPELVFGHLLSSSNYDDNQQKVTGGRNGYGAKLCNIFSTQF 186

Query: 176  IIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVV 235
             +ETAD K  KKYKQ +T+NM K  +P I+ CK GD++TKV+F PD  KF M  ++DD  
Sbjct: 187  TLETADSKLKKKYKQTWTDNMSKMGKPKITDCK-GDDYTKVTFIPDFKKFGMDGIDDDFE 245

Query: 236  ALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR-------------FH 282
            AL+K+RV DLAG     V V+LNG R+P+++F +Y+ MY  ++ +               
Sbjct: 246  ALVKRRVYDLAGTC--KVNVKLNGSRIPIRNFKQYMQMYTNAIKKERGEEAAKDKSEIIT 303

Query: 283  ERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-AN 341
            +  + RWEI   +S+G FQQVSFVN IAT  GG+HV+ VA+Q+ N ++  V KKNK  A 
Sbjct: 304  DNPDPRWEIGFAVSDGSFQQVSFVNSIATTSGGSHVNSVADQICNKLVDAVKKKNKTGAT 363

Query: 342  VKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVE 401
            +K   ++NH++VFVNA I NPAF SQTKE LT + S FGSKC LS+EFLKK+  K+ ++E
Sbjct: 364  LKPAQIRNHIFVFVNAQIVNPAFTSQTKEQLTTKPSQFGSKCVLSDEFLKKIL-KTQVME 422

Query: 402  TLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAM 461
             +L +A  K  + LKK DG +   +    KL DAN AG +    CTLILTEGDSAK LAM
Sbjct: 423  NILHFAEKKADQILKKTDGNRRSRMNN-PKLTDANKAGTKEGHHCTLILTEGDSAKGLAM 481

Query: 462  AGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRY 521
            AG ++VG D FGVFPLRGKLLNVR+AS +Q+  N+EI NIK  LGL+   EY + K LRY
Sbjct: 482  AGRAIVGPDLFGVFPLRGKLLNVRDASVDQISKNAEIQNIKNFLGLQHKKEYTDTKGLRY 541

Query: 522  GHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLL 581
            GHLMIMTDQ                            DHDGSHIKGLLINF    +PSLL
Sbjct: 542  GHLMIMTDQ----------------------------DHDGSHIKGLLINFFQVAFPSLL 573

Query: 582  KIPSFLVEFITPIVKATNKNGKVLS----FYSMPDYEAWKESLGGNASSWSIKYYKGLGT 637
            KIP FL+EFITPIVK    + K  +    F++M +Y+ W+E + G+   W  KYYKGLGT
Sbjct: 574  KIPQFLIEFITPIVKVWKGDPKNPTISKVFFTMQEYKTWQE-IHGHDKRWEKKYYKGLGT 632

Query: 638  STSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKE 697
            S++ + + YF+++  H K F    D + E I+LAFSKKK + RK+WL QF+PG  LD   
Sbjct: 633  SSTDDAEIYFRDLDKHLKQFHVMQDHEAELIDLAFSKKKADERKEWLRQFKPGTFLDHTT 692

Query: 698  KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
              I Y+DF+NKELILFSMAD  RSIPS+VDGLKPGQRK+L+  FKRN  K+ KVA+ SGY
Sbjct: 693  DEITYTDFINKELILFSMADNIRSIPSVVDGLKPGQRKVLYTCFKRNVKKDVKVAELSGY 752

Query: 758  VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
            V   +AY HGEQSL  TI+G+AQ+FVGSNNIN L+P+G FG+R QGG DAAS RYI+TRL
Sbjct: 753  VLGMTAYQHGEQSLQQTIIGLAQNFVGSNNINCLEPSGNFGSRLQGGSDAASPRYIYTRL 812

Query: 818  SPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPR 877
            SP  R +F + D+ LL Y  +DGQ IEP  Y P++P +L+NG+EGIGTGWS+ IPNYNP 
Sbjct: 813  SPFARRIFHEADEPLLTYNVDDGQVIEPEIYFPVVPMILINGAEGIGTGWSTSIPNYNPE 872

Query: 878  DIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKEL 937
            +IVAN++RL+ GE + PM PW+RGF G +        G  Y  +G I ++ +  + I EL
Sbjct: 873  EIVANLKRLMAGEPLVPMEPWFRGFTGEVVSM----GGERYKFSGRISQIGDNEVEITEL 928

Query: 938  PIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKK 995
            PIR WTQD+++ LE II  ++  SFI+ ++ Y+  T V F + L E+   +   EGL +K
Sbjct: 929  PIRSWTQDFKDRLEEIIKAEKVPSFIKDYKDYNTHTKVHFIIQLDEKYAKKAIAEGLEEK 988

Query: 996  FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKL 1055
            FKLT TI+TSN+  FDS+G I KY++ E+IL EFF +RL+ YEKRK+ QL  ++ +L K+
Sbjct: 989  FKLTKTIATSNLVAFDSEGRITKYESVEEILREFFSVRLKLYEKRKQHQLSQMQKDLEKM 1048

Query: 1056 ENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEE 1115
             N+ RF+  +++G+ V++ + +  L+ EL++KGF PF K S   +A   G         E
Sbjct: 1049 TNQARFVQMIIDGKFVISKKPKAQLVRELKEKGFKPFAKVS---DAAAKG---------E 1096

Query: 1116 NPEVV----------NGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKAT 1165
            N  VV            + +  YDYLL M + +LT E+V+ L         E+D L K +
Sbjct: 1097 NAPVVEEDEDDDGEDTQIAANSYDYLLGMPLWSLTKERVEKLRRQIGDKETEIDTLIKLS 1156

Query: 1166 PESLWVKDLD 1175
             E +W  DLD
Sbjct: 1157 KEDIWTADLD 1166


>gi|145522376|ref|XP_001447032.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414532|emb|CAK79635.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1272

 Score = 1045 bits (2702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1220 (47%), Positives = 779/1220 (63%), Gaps = 94/1220 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE Y+K + +EHIL RPDTYIGSI++ ++ +WI +  +  MI + I YVPG +KIFD
Sbjct: 4    KTIEEQYKKMTHIEHILQRPDTYIGSIQRTSEQMWIIQ--NGKMIQKEIEYVPGFFKIFD 61

Query: 85   EILVNAADNKQRDP---KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            EILVNAADN QRD    K   +KV I  E   IS+ N G  +PVEIH+E  +YVPELIFG
Sbjct: 62   EILVNAADNLQRDSRQHKQSYIKVDIGNE---ISIKNDGFPIPVEIHKEYQIYVPELIFG 118

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
              LT SN+DD  K+  GGRNGYGAKLTN++STEF +E  DGK    +K V+ NNM  K  
Sbjct: 119  VFLTGSNFDDTEKRVVGGRNGYGAKLTNVYSTEFTLEVCDGKSY--FKLVWNNNMSNKQI 176

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            P I + K+ D +  +S+KPD  +F M  +E D  AL+ +RV DLAG  G  + V LN  +
Sbjct: 177  PIIKQIKK-DPYVSISYKPDYKRFGMKEIESDTQALLTRRVYDLAGIYGNKISVYLNDEK 235

Query: 262  VPVKSFAEYVDMY---PKSVTRF-HERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            + + SF +YVD+Y     ++  F  +    RWE+ V+ S  QFQ VSFVN I T KGGTH
Sbjct: 236  IKINSFQKYVDLYLPNEGAIKIFDKDMTTPRWEVVVSYSPTQFQHVSFVNAIYTAKGGTH 295

Query: 318  VDYVANQVANHVMAVVN--KKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            V+YV +++   +   +N  KK K+  V+ + +K  LWVF+N LIDNP FDSQTKE +T +
Sbjct: 296  VNYVTDKIIQEIQNEMNNNKKYKSIEVQKYQIKQSLWVFINCLIDNPTFDSQTKENMTTK 355

Query: 376  QSSFGS----KCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN-DGTKTEDVRGIS 430
             S FG     K +++E+F  K   K+ I+ET+   A  K    L K   GTKT  + GI 
Sbjct: 356  VSEFGGTNEEKFKVTEKF-SKALIKTDIIETIFQQAKAKADAKLNKQLKGTKTGRLHGIE 414

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KL+DAN AG +NSE CTLILTEGDSAKALAMAG+ +VGRDR+GVFPL+GKLLNVREAS  
Sbjct: 415  KLDDANDAGKKNSELCTLILTEGDSAKALAMAGIDIVGRDRYGVFPLKGKLLNVREASLK 474

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            Q+L N EI N+ KI+GL++  +Y ++KSLRYG +MIMTDQ                    
Sbjct: 475  QILQNEEIENLIKIIGLQKERQYTDLKSLRYGSVMIMTDQ-------------------- 514

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                    D DGSHIKGL+INFIH FWPSL+K   FL EF+TP++KAT K  + + F+++
Sbjct: 515  --------DIDGSHIKGLIINFIHHFWPSLVKYRGFLKEFVTPLIKAT-KGNQTIPFFTV 565

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
             D+  + +    +  +W IKYYKGLGTS  +E +EYF+N+  H   F ++ D D  +I+L
Sbjct: 566  QDFNKFAQE--EDIKTWKIKYYKGLGTSDDQEAQEYFKNLRTHTIQFRYDGDDDDNSIDL 623

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
             F+KKK   RK+WL Q+    ++D  +  + YS+F++KELI FSMAD  RSIPS++DGLK
Sbjct: 624  CFNKKKANDRKQWLAQYNHDLYVDHTKSELGYSEFIHKELIHFSMADNIRSIPSLMDGLK 683

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+LF  FKRN  +E KV Q  GY++EHSAYHHG+ SL STI+GMAQ+FVGSNNINL
Sbjct: 684  PGQRKVLFACFKRNLKQEIKVVQLGGYIAEHSAYHHGDLSLVSTIIGMAQNFVGSNNINL 743

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L P GQFG+R  GGKD ASARYI T L+ ITR++FP+ DD LL YL +DGQ +EP +Y+P
Sbjct: 744  LLPKGQFGSRAMGGKDHASARYISTALNKITRYIFPEQDDHLLKYLEDDGQMVEPEYYVP 803

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTA 910
            IIP  LVNG+EGIGTGWS+ I NYNP D+V  ++  LNGE  +PM P+YR F G IE   
Sbjct: 804  IIPMSLVNGAEGIGTGWSTSIQNYNPIDLVQQIKNRLNGEQFQPMAPFYRNFDGIIENLP 863

Query: 911  SKEAGVTYTVTGIIEEVNETT--LRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYS 968
            +        + G+I + NE T  + I+ELPI++WT++Y+E+L+  + +  S I   R+Y 
Sbjct: 864  NGNC----VIKGLI-DCNEATDIVTIRELPIKKWTRNYKEWLDKEMAEEGSQIVDLREYH 918

Query: 969  DDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
                + FE+ + +  +   K    L+ FKL++  S SNM LFDS   IKKY+  + I+EE
Sbjct: 919  TKYKIHFEIQMVDGFVQDLKNP--LEYFKLSSPASCSNMVLFDSNSKIKKYECVQDIMEE 976

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ +RLEFY KRK   +  L+ E+  L+NK++FI  V++ EI + N K+ DL+ +L + G
Sbjct: 977  FYQVRLEFYHKRKDYLISKLDREVQLLDNKLKFIKMVISEEIKLRNVKKVDLVKQLDKFG 1036

Query: 1089 FTPFPK--NSKSIEAVVAGAT---------DETEESEENPE-----------VVNGVQSI 1126
            FT F +    KS +    G +         D +EE E++ +            +    SI
Sbjct: 1037 FTRFSQLIQVKSTKVKAFGDSQKQQKNVDDDGSEEEEKSGDEDKQQKKQISKKLQQTPSI 1096

Query: 1127 D---YDYLLSMAIGTLTLEKVQGLLADRDKLNEEV---DDLRKATPESLWVKDLDALDMQ 1180
            D   ++YLLSM + +LT EKV+ L   +D+LN+ V   + L       +W +DLD     
Sbjct: 1097 DISEFNYLLSMPLFSLTYEKVEKL---QDELNQRVQSREALINKEISLMWREDLDKFLEA 1153

Query: 1181 LDELDKSDARAEEERMKIKG 1200
              E+ + + R   ++ K+ G
Sbjct: 1154 YQEMVEIELRLINQQEKMPG 1173


>gi|325089309|gb|EGC42619.1| DNA topoisomerase II [Ajellomyces capsulatus H88]
          Length = 1712

 Score = 1045 bits (2702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 543/1090 (49%), Positives = 717/1090 (65%), Gaps = 84/1090 (7%)

Query: 120  GDGVPVE----IHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEF 175
            G  VP E      ++E VY+PEL+FGHLL+SSNYDDN +K TGGRNGYGAKL NIFSTEF
Sbjct: 127  GATVPKENSEKYQKKEKVYIPELVFGHLLSSSNYDDNQQKVTGGRNGYGAKLCNIFSTEF 186

Query: 176  IIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVV 235
             +ETAD K  KKYKQ +T+NM K  +P I+ CK GD++TKV+F PD  KF M  ++DD  
Sbjct: 187  TLETADSKLKKKYKQTWTDNMSKMGKPKITDCK-GDDYTKVTFIPDFKKFGMDGIDDDFE 245

Query: 236  ALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR-------------FH 282
            AL+K+RV DLAG     V V+LNG R+P+++F +Y+ MY  ++ +               
Sbjct: 246  ALVKRRVYDLAGTC--KVTVKLNGSRIPIRNFKQYMQMYTNAIKKERGEEASKDKSEIIT 303

Query: 283  ERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-AN 341
            +  + RWEI   +S+G FQQVSFVN IAT  GG+HV+ VA+Q+ N ++  V KKNK  A 
Sbjct: 304  DNPDPRWEIGFAVSDGSFQQVSFVNSIATTSGGSHVNSVADQICNKLVEAVKKKNKTGAT 363

Query: 342  VKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVE 401
            +K   ++NH++VFVNA I NPAF SQTKE LT + S FGSKC LS+EFLKK+  K+ ++E
Sbjct: 364  LKPAQIRNHIFVFVNAQIVNPAFTSQTKEQLTTKPSQFGSKCVLSDEFLKKIL-KTQVME 422

Query: 402  TLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAM 461
             +L +A  K  + LKK DG +   +    KL DAN AG +    CTLILTEGDSAK LAM
Sbjct: 423  NILHFAEKKADQILKKTDGNRRSRMNN-PKLTDANKAGTKEGHHCTLILTEGDSAKGLAM 481

Query: 462  AGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRY 521
            AG ++VG D FGVFPLRGKLLNVR+AS +Q+  N+EI NIK  LGL+   EY + K LRY
Sbjct: 482  AGRAIVGPDLFGVFPLRGKLLNVRDASVDQISKNAEIQNIKNFLGLQHKKEYTDTKGLRY 541

Query: 522  GHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLL 581
            GHLMIMTDQ                            DHDGSHIKGLLINF    +PSLL
Sbjct: 542  GHLMIMTDQ----------------------------DHDGSHIKGLLINFFQVAFPSLL 573

Query: 582  KIPSFLVEFITPIVKATNKNGKVLS----FYSMPDYEAWKESLGGNASSWSIKYYKGLGT 637
            KIP FL+EFITPIVK    + K  +    F++M +Y+ W+E + G+   W  KYYKGLGT
Sbjct: 574  KIPQFLIEFITPIVKVWKGDPKNPTISKVFFTMQEYKTWQE-IHGHDKRWEKKYYKGLGT 632

Query: 638  STSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKE 697
            S++ + + YF+++  H K F    D + E I+LAFSKKK + RK+WL QF+PG  LD   
Sbjct: 633  SSTDDAEIYFRDLDKHLKQFHVMQDHEAELIDLAFSKKKADERKEWLRQFKPGTFLDHTT 692

Query: 698  KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
              I Y+DF+NKELILFSMAD  RSIPS++DGLKPGQRK+L+  FKRN  K+ KVA+ SGY
Sbjct: 693  DEITYTDFINKELILFSMADNIRSIPSVIDGLKPGQRKVLYTCFKRNVKKDVKVAELSGY 752

Query: 758  VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
            V   +AY HGEQSL  TI+G+AQ+FVGSNNIN L+P+G FG+R QGG DAAS RYI+TRL
Sbjct: 753  VLGMTAYQHGEQSLQQTIIGLAQNFVGSNNINCLEPSGNFGSRLQGGSDAASPRYIYTRL 812

Query: 818  SPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPR 877
            SP  R +F + D+ LL Y  +DGQ IEP  Y P++P +L+NG+EGIGTGWS+ IPNYNP 
Sbjct: 813  SPFARRIFHEADEPLLTYNVDDGQVIEPEIYFPVVPMILINGAEGIGTGWSTSIPNYNPE 872

Query: 878  DIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKEL 937
            +IVAN++RL+ GE + PM PW+RGF G +        G  Y  +G I ++ +  + I EL
Sbjct: 873  EIVANLKRLMAGEPLVPMEPWFRGFTGEVVSM----GGERYKFSGRISQIGDNEVEITEL 928

Query: 938  PIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKK 995
            PIR WTQD+++ LE II  ++  SFI+ ++ Y+  T V F + L E+   +   EGL +K
Sbjct: 929  PIRSWTQDFKDRLEEIIKAEKVPSFIKDYKDYNTHTKVHFIIQLDEKYAKKAIAEGLEEK 988

Query: 996  FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKL 1055
            FKLT TI+TSN+  FDS+G I KY++ E+IL EFF +RL+ YEKRK+ QL  ++ +L K+
Sbjct: 989  FKLTKTIATSNLVAFDSEGRITKYESVEEILREFFSVRLKLYEKRKQHQLSQMQKDLEKM 1048

Query: 1056 ENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEE 1115
             N+ RF+  +++G+ V++ + +  L+ EL++KGF PF K S   +A   G         E
Sbjct: 1049 TNQARFVQMIIDGKFVISKKPKAQLVRELKEKGFKPFAKVS---DAAAKG---------E 1096

Query: 1116 NPEVV----------NGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKAT 1165
            N  VV            + +  YDYLL M + +LT E+V+ L         E++ L K +
Sbjct: 1097 NAPVVEEDEDDDGEDTEIAANSYDYLLGMPLWSLTKERVEKLRRQIGDKETEINTLIKLS 1156

Query: 1166 PESLWVKDLD 1175
             E +W  DLD
Sbjct: 1157 KEDIWTADLD 1166


>gi|84995060|ref|XP_952252.1| DNA topoisomerase II [Theileria annulata strain Ankara]
 gi|65302413|emb|CAI74520.1| DNA topoisomerase II, putative [Theileria annulata]
          Length = 1369

 Score = 1037 bits (2681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 560/1217 (46%), Positives = 787/1217 (64%), Gaps = 92/1217 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+EE YQKK+QLEHILLRPDTYIGS E + Q +W+Y+EE   M++ TI YVPGLYKIFD
Sbjct: 5    KTVEERYQKKTQLEHILLRPDTYIGSTELNNQQMWLYDEEKNRMVYETIDYVPGLYKIFD 64

Query: 85   EILVNAADNKQR---DP---KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
            E+LVNAAD   R   DP   KM  +KV ID+    I V+N G+ +P++IH E  +YVP+L
Sbjct: 65   ELLVNAADVYARQLSDPTLEKMTCIKVTIDRGTGAIVVYNDGEPIPIQIHSEHKMYVPQL 124

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            IFG LLTS NYDD+ ++ TGGRNG+GAKL NIFS  F +   + K  KK+K  + NNM K
Sbjct: 125  IFGELLTSDNYDDSEERVTGGRNGFGAKLANIFSKTFTVVVGNKKTHKKFKMTWCNNMTK 184

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
               P   +   G ++ K++F PD ++FN+  L++    ++KKRV D+AG LG  VKV LN
Sbjct: 185  TKSPAHIESYTGPDFVKITFIPDYSRFNLEELDEGTYRVLKKRVYDMAGTLG--VKVYLN 242

Query: 259  GHRVPVKSFAEYVDMY-PKSVT---RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKG 314
              R+ VK F +YV++Y P+  T   + +E++  RWE+ ++ SE  F+QVSFVN I T+KG
Sbjct: 243  NERIKVKDFKDYVNLYLPEDATEIVKIYEKM-YRWEVVISSSEDGFRQVSFVNSINTLKG 301

Query: 315  GTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            GTHV +V + +   +   VN KNK    +K + ++NH++VF+N  I NP+FDSQTKETLT
Sbjct: 302  GTHVSHVVDPLVQSLTKKVNSKNKGGIELKPNQIRNHIFVFINCQIVNPSFDSQTKETLT 361

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK--TEDVRGISK 431
             +   FGSK  +S++ L +V  KS I + ++SW + K + +LKK        + + GI K
Sbjct: 362  TKIVKFGSKYTMSDKTLNQV-LKSKIFDNIISWLHEKTNIELKKKMKVAKGNDKLFGIPK 420

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            LEDAN AG R + +CTLILTEGDSAK   +AGLSVVGRD++GVFPL+GKLLNVREAS  Q
Sbjct: 421  LEDANKAGTRYATECTLILTEGDSAKTSCLAGLSVVGRDKYGVFPLKGKLLNVREASYKQ 480

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKS-LRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            +  N E+ NI KI+GL    +     S LRYG +MIMTDQ                    
Sbjct: 481  LTQNIEVQNILKIMGLDITNKLRQDSSGLRYGSIMIMTDQ-------------------- 520

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK-NGKVLSFYS 609
                    D+DGSHIKGLLIN  H+FWP L++   F+ EFITPI+K TNK N +V SF++
Sbjct: 521  --------DYDGSHIKGLLINMFHNFWPKLIQFNGFIKEFITPIIKVTNKSNNQVHSFFT 572

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            + D+  WK+++  + S++ +KYYKGLGTS+  E KEYF N+  H  +F + D  D ++I+
Sbjct: 573  IEDFNNWKQTV--DISNYRVKYYKGLGTSSDNEFKEYFGNLNRHIVEFKYVDTVDDDSID 630

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKK+I+ RKKW+  +  G  +D   K ++YSDF+NKELI FS+ D +RSIPS++DG 
Sbjct: 631  LAFSKKRIDDRKKWIQNYVLGTTVDHSIKKLRYSDFINKELIQFSIYDTERSIPSVIDGF 690

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+LF  FKRN   E KVAQ +GY++EHSAYHHGE SL  TI+ MAQD+VGSNNIN
Sbjct: 691  KPGQRKVLFGCFKRNLKNECKVAQLTGYIAEHSAYHHGENSLQQTIINMAQDYVGSNNIN 750

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL P GQFG+R +GGKDAA+ARYIFT+LSP+TR++F ++DD +LDY N+DGQ IEP +Y+
Sbjct: 751  LLLPCGQFGSRKEGGKDAAAARYIFTKLSPLTRYIFLQEDDPILDYQNDDGQIIEPYYYL 810

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PIIP VLVNG+EGIGTG+S++IP+YNP DI+ N+   L+ + M  M PWYR F GT+   
Sbjct: 811  PIIPMVLVNGAEGIGTGFSTFIPSYNPIDIIDNIVNFLDNKDMNDMIPWYRNFKGTV--- 867

Query: 910  ASKEAGVTYTVTGIIE---EVNETTLRIKELPIRRWTQDYREFLESIIDQN---DSFIRG 963
             ++ + + Y + G  E    +N+  L I ELPI RWT DYRE+L SI+  N   + +I  
Sbjct: 868  -TRNSKLGYDIIGNYELNHSINQ--LVITELPINRWTNDYREYLNSIMATNKEDEGYITD 924

Query: 964  FRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPE 1023
            +  +S +  +  ++ L++     T  + + K FKL TTISTSNM LFD    IKKY+   
Sbjct: 925  YGDFSSNEFIKIKIKLNDSGPDIT--DDIEKVFKLKTTISTSNMILFDCNKRIKKYNGAI 982

Query: 1024 QILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLE 1083
             IL++F   R+++Y KR++  ++ L+L+L +L N++RFI  ++N E+V+  + +  ++ E
Sbjct: 983  DILKDFITTRVKYYTKRREYMIKQLQLQLQQLSNQIRFINMIINNELVIFRKSKKQIVSE 1042

Query: 1084 LRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEK 1143
            L++  F  +    +  E                           ++YLL M++ +LTL+ 
Sbjct: 1043 LKRLNFNTYKPEEEEDEEDNDIE--------------------GFNYLLKMSLLSLTLDH 1082

Query: 1144 VQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGN 1203
            +  L  + +    ++ +L   TP  L+ KDL  L  QL  +     +  ++R+K++    
Sbjct: 1083 INKLNNEYNSKQVQLKELINTTPIQLYKKDLVVLKEQL--VQTKQYKPYDKRVKLQPE-- 1138

Query: 1204 GDAGPKIVAKRAPKNAR 1220
                  IV+++ P+  R
Sbjct: 1139 -----PIVSEKVPETRR 1150


>gi|145496633|ref|XP_001434307.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124401431|emb|CAK66910.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1220

 Score = 1037 bits (2681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 557/1192 (46%), Positives = 771/1192 (64%), Gaps = 91/1192 (7%)

Query: 35   SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
            S +EHIL RPDTYIGS++K  + +WI +  +  MI + I YVP  +KIFD+ILVNAADN 
Sbjct: 2    SHIEHILNRPDTYIGSVQKMNELMWIVK--NGKMIQKEIEYVPAFFKIFDDILVNAADNI 59

Query: 95   QRDP---KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDD 151
            QR+    KM +++V I  +   ISV N G  +PVEIH+E  +YVPELIFG  LT SN+DD
Sbjct: 60   QRNNQTYKMSSLRVEIGNQ---ISVKNDGQPIPVEIHKEYQLYVPELIFGVSLTGSNFDD 116

Query: 152  NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
              K+  GGRNGYGAKLTN++S+EF +E  DG      KQV++NNM  K  P I + K+ D
Sbjct: 117  TEKRVVGGRNGYGAKLTNVYSSEFSVEVCDGSNY--LKQVWSNNMSNKQIPIIKQMKK-D 173

Query: 212  NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             + ++++KPD  +F M  +E+D  AL+ +RV D+AG  G  + V LN  ++P+ SF +YV
Sbjct: 174  PFVQITYKPDFKRFGMNEIEEDTQALLVRRVYDMAGIYGNRINVYLNDEKIPINSFQKYV 233

Query: 272  DMY-PKSVTRFH--ERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANH 328
            D+Y P +  + +  E    RWE+ V+ S  QFQ VSFVN I T KGGTHV +V +++   
Sbjct: 234  DLYLPSNSIKIYDKEMTTPRWEVVVSYSATQFQHVSFVNSIFTSKGGTHVTHVTDKLIQE 293

Query: 329  VMAVV--NKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS----K 382
            +   +  NKK K+  V+ + +K  LW+FVN LI+NP FDSQTKE LT R + FG     K
Sbjct: 294  IQNEMKSNKKYKHLEVQKYQIKQSLWIFVNCLINNPTFDSQTKENLTTRVTDFGGTDEEK 353

Query: 383  CELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN-DGTKTEDVRGISKLEDANLAGGR 441
             +++E+F  K   K+ I+ET+   A  K    L K   GTKT  + GI KL+DAN AG +
Sbjct: 354  FKVTEKF-SKALIKTDIIETIFQQAKAKADAKLNKQLKGTKTSKLHGIEKLDDANDAGKK 412

Query: 442  NSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNI 501
            NSE CTLILTEGDSAKALAMAG+ +VGRDR+GVFPL+GKLLNVREAS  Q+++N EI N+
Sbjct: 413  NSEFCTLILTEGDSAKALAMAGIDIVGRDRYGVFPLKGKLLNVREASVKQIMDNEEIQNL 472

Query: 502  KKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHD 561
             KI+GL++  EY ++KSLRYG +MIMTDQ                            D D
Sbjct: 473  IKIIGLQKDREYGDLKSLRYGSVMIMTDQ----------------------------DID 504

Query: 562  GSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLG 621
            GSHIKGL+INFIH FWPSLLK   FL EF+TP++KAT K  + + F+++ D+  + +   
Sbjct: 505  GSHIKGLIINFIHHFWPSLLKYKGFLKEFVTPLIKAT-KGNQTIPFFTVQDFNKFAQI-- 561

Query: 622  GNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARK 681
             +  SW IKYYKGLGTS   E +EYF+N+  H   F +++++D ++I+L F+KKK   RK
Sbjct: 562  QDIKSWKIKYYKGLGTSDDLEAQEYFRNLISHTIQFRYDNEEDDQSIDLCFNKKKANDRK 621

Query: 682  KWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 741
            +WL Q+    ++D  +K + Y DF++KELI FSMAD  RSIPS++DGLKPGQRK+LF  F
Sbjct: 622  QWLAQYNHDLYVDHTQKELGYQDFIHKELIHFSMADNIRSIPSLMDGLKPGQRKVLFACF 681

Query: 742  KRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRN 801
            KRN  +E KV Q  GY++EHSAYHHG+ SL +TI+GMAQ+FVGSNNINLL P GQFG+R 
Sbjct: 682  KRNLKQEIKVVQLGGYIAEHSAYHHGDISLVTTIIGMAQNFVGSNNINLLLPRGQFGSRA 741

Query: 802  QGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSE 861
             GGKD ASARYI T L+ ITR++FP+ DD ++ Y+ +DG+ +EP +Y+PIIP  LVNG+E
Sbjct: 742  MGGKDHASARYISTVLNKITRYIFPEQDDHVVKYIEDDGEMVEPEYYVPIIPMSLVNGAE 801

Query: 862  GIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVT 921
            GIGTGWS+ I NYNP ++V  +++ LNGE  + + P+YR F G IE   +  +     V 
Sbjct: 802  GIGTGWSTSIQNYNPVELVEQIKKRLNGEQFDNLTPYYRNFDGNIETQPNGNS----LVK 857

Query: 922  GIIEEVNETTL-RIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLS 980
            GIIE   ET +  IKELPI++WT++Y+E+L+  I Q  + I   R+Y     + FE+ ++
Sbjct: 858  GIIECNEETDIVTIKELPIKKWTKNYKEWLDKEISQEGNPIMDLREYHTKYKIHFEIQMT 917

Query: 981  EESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKR 1040
            E  + + K     + FKL T  S +NM LFD +  IKK+++  +ILEEF+ +RL+FY+KR
Sbjct: 918  EGYVSQLKNP--YEYFKLVTPFSNNNMVLFDGQNKIKKFESIAEILEEFYQVRLQFYQKR 975

Query: 1041 KKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPK----NS 1096
            K   L  L+ E+  L NK RFI  V++ EI + N K+ DL+ +L +  FT F +    NS
Sbjct: 976  KDYLLSKLDREVQLLHNKSRFIKMVISEEIRLKNVKKADLVQQLDKNQFTRFSQLITVNS 1035

Query: 1097 KSIEAV--------------VAGATDETEESEENPEVVNGVQS-------IDYDYLLSMA 1135
              ++A                + A+D+ + S++ PE     Q+        DY+YLLSM 
Sbjct: 1036 TKMQAFGDSKNPKKNVDDNDTSEASDDEQVSKKKPENTENQQNNKTTLDISDYNYLLSMP 1095

Query: 1136 IGTLTLEKVQGLLADRDKLNEEV---DDLRKATPESLWVKDLDALDMQLDEL 1184
            + +LT EKV  L    D+LN ++   + L      ++W++DL+      DE+
Sbjct: 1096 LFSLTNEKVLKL---EDELNSKLQAKNKLFTKEIAAMWIEDLNKFLEVYDEM 1144


>gi|308510362|ref|XP_003117364.1| CRE-TOP-2 protein [Caenorhabditis remanei]
 gi|308242278|gb|EFO86230.1| CRE-TOP-2 protein [Caenorhabditis remanei]
          Length = 1547

 Score = 1036 bits (2679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 603/1358 (44%), Positives = 824/1358 (60%), Gaps = 170/1358 (12%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEI 86
            IE++YQKKSQLEHILLRPDTYIGS+E        Y E++   +      +P LY+     
Sbjct: 63   IEDIYQKKSQLEHILLRPDTYIGSVE--------YTEKTPIRLKSKRIKIPYLYRF---- 110

Query: 87   LVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
                                  ++++ ISV+N+G G+PV +H+ E VYVPELIFG LLTS
Sbjct: 111  ----------------------RKNNRISVYNNGKGIPVTLHKVEKVYVPELIFGTLLTS 148

Query: 147  SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            SNY+D+ KK TGGRNGYGAKL NIFST+F +ET+      ++KQ +  NM ++ EP+I K
Sbjct: 149  SNYNDDEKKVTGGRNGYGAKLCNIFSTKFTLETSSKDFKSQFKQTWVKNMTREKEPDIKK 208

Query: 207  CKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
              + +++T+++F+PDL+KF M  L+DD+  LM +R  D+AG   K V V LNG RVPVK 
Sbjct: 209  S-DSEDFTRITFQPDLSKFKMDELDDDICHLMARRAYDVAGST-KGVTVFLNGERVPVKG 266

Query: 267  FAEYVDMYPKSVTR-------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
            F +YV MY    T         +E+V +RW++ + LSE  FQQVSFVN IAT KGG HVD
Sbjct: 267  FEDYVKMYTSQFTNDGEPIKVAYEQVGDRWQVALALSEKGFQQVSFVNSIATTKGGRHVD 326

Query: 320  YVANQ-VANHVMAVVNKKNKNA-NVKAHNV------------------KNHLWVFVNALI 359
            YVA+Q VA  + ++  K +K A N+K   +                  KNH+WVFVNALI
Sbjct: 327  YVADQMVAKFIDSIKRKLSKTAMNIKPFQIDPNSLNSSNTSICIHFQIKNHMWVFVNALI 386

Query: 360  DNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKN 418
            +NP FDSQTKET+TL+   FGS C LSE+F  K     GI + ++SW  FKQ  DL KK 
Sbjct: 387  ENPTFDSQTKETMTLQSKQFGSTCTLSEKF-SKAAGNVGITDAVMSWVRFKQMDDLNKKC 445

Query: 419  DGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLR 478
              TKT  ++GI KLEDAN AG +NS+QCTLILTEGDSAK LA++GL+VVGRD+FGVFPLR
Sbjct: 446  SKTKTSKLKGIPKLEDANDAGTKNSQQCTLILTEGDSAKTLAVSGLAVVGRDKFGVFPLR 505

Query: 479  GKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAP 535
            GKLLNVR+ +  Q+ +N+EI  + KILGL+   +Y   ++ K+LRYG +M+M DQ     
Sbjct: 506  GKLLNVRDGNMKQIADNAEINAMIKILGLQYKKKYETEDDFKTLRYGKMMVMADQ----- 560

Query: 536  LSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIV 595
                                   D DGSHIKGL+INF+H FWPSL++  +F+ EFITPIV
Sbjct: 561  -----------------------DQDGSHIKGLVINFVHHFWPSLIQ-RNFVEEFITPIV 596

Query: 596  KATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKK 655
            KA+ K  + +SF+S+P+Y  W+ +   N  ++ IKYYKGLGTSTSKE KEYF ++  H+ 
Sbjct: 597  KAS-KGKEEVSFFSIPEYSEWRMNTD-NWKTYKIKYYKGLGTSTSKEAKEYFSDMLRHRI 654

Query: 656  DFVWEDDQDGEAIELAFSKKKIEARKKWL---LQFEPGNHL---------DQKEKYIKYS 703
             F +   +D  A+E+AFSKKKI+ RK WL   +Q +    L         ++  + + + 
Sbjct: 655  KFKYGGAEDDMAVEMAFSKKKIDERKDWLTKWMQEKKARKLRGLAEEYLYNKDTRAVTFK 714

Query: 704  DFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSA 763
            DFVN+EL+LFS  D +RSIP +VDG KPGQRK+LF  FKR   +E KVAQ +G V+E SA
Sbjct: 715  DFVNRELVLFSNLDNERSIPCLVDGFKPGQRKVLFACFKRADKREVKVAQLAGAVAEISA 774

Query: 764  YHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRF 823
            YHHGEQSL  TI+ +AQDFVGSNNINLL P GQFGTR QGGKD+ASARYIFT+LSP+TR 
Sbjct: 775  YHHGEQSLMGTIVNLAQDFVGSNNINLLLPIGQFGTRLQGGKDSASARYIFTQLSPVTRS 834

Query: 824  LFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANV 883
            +FP  DD +L +L E+ Q+IEP WY PIIP VLVNG++GIGTGWS+ IPNYNPRDIV N+
Sbjct: 835  IFPAHDDNVLRFLYEENQRIEPEWYCPIIPMVLVNGAQGIGTGWSTNIPNYNPRDIVKNI 894

Query: 884  RRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWT 943
            +RL+ GE  + + PWY+ F G I +  S      Y   G +  +++ T+ I ELP+++WT
Sbjct: 895  KRLIAGESQKAIAPWYKNFRGNIIQIDSSR----YACYGEVATIDDNTIEITELPVKQWT 950

Query: 944  QDYRE-FLESIIDQNDS-----FIRGFRQYSDDTTVDFEVFLSEESMMRTKQ-EGLLKKF 996
            QDY+E  LE+++D +D       +  +++Y  DTTV F V L+   +   ++ E L + F
Sbjct: 951  QDYKEKVLEALLDSSDKDKKAPLVLDYKEYHTDTTVKFVVKLAPGKLRELERGEDLHQVF 1010

Query: 997  KLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLE 1056
            KL + I+T+ M LFD+ G ++ Y +PE+I +EF+  R E Y +RK   L  L+ +  +L 
Sbjct: 1011 KLQSVINTTCMVLFDAAGCLRTYSSPEEITQEFYDCRKEKYIQRKDYLLGVLQAQSQRLT 1070

Query: 1057 NKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-------------KNSKSIEAVV 1103
            N+ RFI+  +N EIV+ N+K+  ++  L +  F P P             + S  IE   
Sbjct: 1071 NQARFIVAKINNEIVMENKKKAVIVETLIKMKFDPDPVKKWKEEQKLKELRESGEIELDE 1130

Query: 1104 AGATDETEESEENPEVVNGVQSI-----DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEV 1158
                D+ EE  E     +  + +     DYDYL+ MA+  L+ E+   LL + ++   EV
Sbjct: 1131 EDQVDDDEEDGEGTSASSSTKVLETKLSDYDYLVGMALIKLSEEEKNKLLRESEEKMAEV 1190

Query: 1159 DDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKN 1218
              L K T + LW  DLD     + ELDK +AR   E+  I      DA  K  AK+   +
Sbjct: 1191 KSLEKKTWQDLWHDDLDNF---MSELDKQEAR---EKADI------DASIKNAAKKLAAD 1238

Query: 1219 ARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAK 1278
              K  + S      E +   D V   ++PK  A   KA  EK+   ++            
Sbjct: 1239 V-KAGRGSKKTVVAEVLPSKDGVR--IEPKLDAAT-KAKYEKMAQPKK------------ 1282

Query: 1279 LNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRT 1316
              E++     EP  ++    + +K   PA KK P K++
Sbjct: 1283 --ERVKKEPTEPKVEKKEGQDIKKFMSPAVKKSPKKKS 1318


>gi|71030782|ref|XP_765033.1| DNA topoisomerase II [Theileria parva strain Muguga]
 gi|68351989|gb|EAN32750.1| DNA topoisomerase II, putative [Theileria parva]
          Length = 1378

 Score = 1034 bits (2673), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 562/1195 (47%), Positives = 779/1195 (65%), Gaps = 83/1195 (6%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KT+EE YQKK+QLEHILLRPDTYIGS E + Q +W+++EE   M++ TI YVPGLYKIFD
Sbjct: 5    KTVEERYQKKTQLEHILLRPDTYIGSTELNNQQMWVFDEEKNRMVYETIDYVPGLYKIFD 64

Query: 85   EILVNAADNKQR---DP---KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
            E+LVNAAD   R   DP   KM  +KV ID+    I V+N G+ +P++IH E  +YVP+L
Sbjct: 65   ELLVNAADVYARQLSDPTLEKMTCIKVTIDRGTGAIVVYNDGEPIPIQIHNEHKMYVPQL 124

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            IFG LLTS NYDD+ ++ TGGRNG+GAKL NIFS  F +   + K  KK+K  + +NM K
Sbjct: 125  IFGELLTSDNYDDSEERVTGGRNGFGAKLANIFSKTFTVVVGNKKTKKKFKMTWCDNMTK 184

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
               P   +   G ++ K++F PD ++FN+T L++    ++KKRV D+AG LG  VKV LN
Sbjct: 185  TKSPAQIESYMGPDFVKITFIPDYSRFNLTELDEGTYKVLKKRVYDMAGTLG--VKVFLN 242

Query: 259  GHRVPVKSFAEYVDMY-PKSVT---RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKG 314
              R+ VK F +YV++Y P+  T   + +E++  RWE+ ++ SE  F+QVSFVN I TIKG
Sbjct: 243  NERIKVKDFKDYVNLYLPEDATEIVKIYEKM-YRWEVVISTSEDGFRQVSFVNSINTIKG 301

Query: 315  GTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            GTHV +V + +   +   VN KNK    +K + +KNH++VF+N  I NP+FDSQTKETLT
Sbjct: 302  GTHVSHVVDPLVQSLTKKVNSKNKGGIELKPNQIKNHIFVFINCQIVNPSFDSQTKETLT 361

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK--TEDVRGISK 431
             +   FGSK  +S++ L +V  KS I + +LSW + K + +LKK        + + GI K
Sbjct: 362  TKIVKFGSKYTMSDKTLNQV-LKSKIFDNILSWLHEKTNIELKKKMKVAKGNDKLFGIPK 420

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            LEDAN AG R + +CTLILTEGDSAK   +AGLSVVGRD++GVFPL+GKLLNVREAS  Q
Sbjct: 421  LEDANKAGTRYATECTLILTEGDSAKTSCLAGLSVVGRDKYGVFPLKGKLLNVREASYKQ 480

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKS-LRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            +  N E+ NI KI+GL    +     S LRYG +MIMTDQ                    
Sbjct: 481  LTQNIEVQNILKIMGLDITNKLRQDSSGLRYGSIMIMTDQ-------------------- 520

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK-NGKVLSFYS 609
                    D+DGSHIKGLLIN  H+FWP L++   F+ EFITPI+K TNK N +V SF++
Sbjct: 521  --------DYDGSHIKGLLINMFHNFWPKLIQFNGFIKEFITPIIKVTNKSNNQVHSFFT 572

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            + D+  WK+++  + S++ IKYYKGLGTS+  E KEYF N+  H  +F + D  D ++I+
Sbjct: 573  IEDFNNWKQTV--DISNYRIKYYKGLGTSSDNEFKEYFGNLNRHIVEFKYVDTVDDDSID 630

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKK+I+ RK+W+  +  G  +D   K ++YSDF+NKELI FS+ D +RSIPS++DG 
Sbjct: 631  LAFSKKRIDDRKRWMQNYVLGTTVDHSIKKLRYSDFINKELIQFSIYDTERSIPSVIDGF 690

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+LF  FKRN   E KVAQ +GY++EHSAYHHGE SL  TI+ MAQDFVGSNNIN
Sbjct: 691  KPGQRKVLFGCFKRNLKNECKVAQLTGYIAEHSAYHHGENSLQQTIVNMAQDFVGSNNIN 750

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL P GQFG+R +GGKDAA+ARYIFT+LSP+TR++F ++DD +LDY N+DGQ IEP +Y+
Sbjct: 751  LLLPCGQFGSRKEGGKDAAAARYIFTKLSPLTRYIFLQEDDPILDYQNDDGQIIEPYYYL 810

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PIIP VLVNG+EGIGTG+S+YIP+YNP D++ N+   L+ + M  M PWYR F GT+   
Sbjct: 811  PIIPMVLVNGAEGIGTGFSTYIPSYNPIDVIDNIVNFLDNKDMNDMIPWYRNFKGTV--- 867

Query: 910  ASKEAGVTYTVTGIIEEVNET--TLRIKELPIRRWTQDYREFLESIIDQN---DSFIRGF 964
             ++   + Y +TG   E+N +   L I ELP+ RW  DYREFL SI+  N   + +I  +
Sbjct: 868  -TRNTKLGYDITGKY-ELNHSLNQLVITELPVNRWINDYREFLNSIMVTNKEDEGYITDY 925

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
              YS +  +  ++ L++     T  + + K FKL TTI TSNM LFD    IKKY+    
Sbjct: 926  GDYSSNEDIKIKIKLNDSGPDIT--DDIEKVFKLKTTIPTSNMILFDCNKRIKKYNGAID 983

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            IL++F   R+++Y KR++  ++ L+L+L +L N++RFI  ++N E+V+  + +  ++ EL
Sbjct: 984  ILKDFITTRVKYYSKRREYMIKQLQLQLQQLSNQIRFINMIINNELVIFRKSKKQIVSEL 1043

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            ++  F  + +  +  E                           ++YLL M++ +LTL+ +
Sbjct: 1044 KRLNFNTYKQEEEEDEEDNDIE--------------------GFNYLLKMSLLSLTLDHI 1083

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIK 1199
              L  + +     + +L   TP  L+ KDL  L  QL  +  +  R  E+R+KI+
Sbjct: 1084 NKLNNEYNSKQVLLKELINTTPIQLYKKDLSVLKDQL--IQTNQYRPYEKRVKIQ 1136


>gi|145491451|ref|XP_001431725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124398830|emb|CAK64327.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1274

 Score = 1033 bits (2670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 565/1217 (46%), Positives = 774/1217 (63%), Gaps = 88/1217 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE Y+K + +EHIL RPDTYIGSI++ ++ +WI +  +  MI + I YVPG +KIFD
Sbjct: 4    KTIEEQYKKMTHIEHILQRPDTYIGSIQRTSEQMWIIQ--NGKMIQKEIEYVPGFFKIFD 61

Query: 85   EILVNAADNKQRDP---KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFG 141
            EILVNAADN QRD    K   +KV I  E   I++ N G  +PVEIH+E  +YVPELIFG
Sbjct: 62   EILVNAADNLQRDTRQHKQSYIKVDIGNE---ITIKNDGLPIPVEIHKEYQIYVPELIFG 118

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
              LT SN+DD+ K+  GGRNGYGAKLTN++STEF +E  DG     +K V+ NNM  K  
Sbjct: 119  VFLTGSNFDDSEKRVVGGRNGYGAKLTNVYSTEFTLEVCDGNNY--FKLVWNNNMSNKQI 176

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            P I + K+ D +  +S+KPD  +F M  +E D  AL+ +RV DLAG  G  + V LN  +
Sbjct: 177  PTIKQLKK-DPYVSISYKPDYKRFGMKEIEADTQALLTRRVYDLAGIYGSKINVYLNDEK 235

Query: 262  VPVKSFAEYVDMY---PKSVTRF-HERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            + + SF +YVD+Y     ++  F  +    RWE+ V+ S  QFQ VSFVN I T KGGTH
Sbjct: 236  IKINSFQKYVDLYLPTEGAIKIFDKDMTTPRWEVVVSYSPTQFQHVSFVNAIYTAKGGTH 295

Query: 318  VDYVANQVANHVMAVVN--KKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            V+YV +++   +   +N  KK K+  V+ + +K  LWVF+N LIDNP FDSQTKE +T +
Sbjct: 296  VNYVTDKIIQEIQNEMNNNKKYKSIEVQKYQIKQSLWVFINCLIDNPTFDSQTKENMTTK 355

Query: 376  QSSFGSKCE----LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN-DGTKTEDVRGIS 430
             S FG   E    ++E+F  K   K+ I+ET+   A  K    L K   GTKT  + GI 
Sbjct: 356  VSEFGGSSEEKFKVTEKF-SKALIKTDIIETIFQQAKAKADAKLNKQLKGTKTGRLHGIE 414

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KL+DAN AG +NSE CTLILTEGDSAKALAMAG+ +VGRDR+GVFPL+GKLLNVREAS  
Sbjct: 415  KLDDANDAGKKNSELCTLILTEGDSAKALAMAGIDIVGRDRYGVFPLKGKLLNVREASLK 474

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            Q+L N EI N+ KI+GL++  +Y ++KSLRYG +MIMTDQ                    
Sbjct: 475  QILQNEEIENLIKIIGLQKERQYTDLKSLRYGSVMIMTDQ-------------------- 514

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                    D DGSHIKGL+INFIH FWPSL+K   FL EF+TP++KAT K  + + F+++
Sbjct: 515  --------DIDGSHIKGLIINFIHHFWPSLVKYSGFLKEFVTPLIKAT-KGNQTIPFFTV 565

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
             D+  + +    +  +W IKYYKGLGTS  +E +EYF+N+  H   F ++ D D  +I+L
Sbjct: 566  QDFNKFAQE--EDIKNWKIKYYKGLGTSDDQEAQEYFKNLRTHTIQFRYDGDDDDSSIDL 623

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
             F+KKK   RK+WL Q+    ++D  +  + YS+F++KELI FSMAD  RSIPS++DGLK
Sbjct: 624  CFNKKKANDRKQWLAQYNHDLYVDHTKSELGYSEFIHKELIHFSMADNIRSIPSLMDGLK 683

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+LF  FKRN  +E KV Q  GY++EHSAYHHG+ SL STI+GMAQ+FVGSNNINL
Sbjct: 684  PGQRKVLFACFKRNLKQEIKVVQLGGYIAEHSAYHHGDLSLVSTIIGMAQNFVGSNNINL 743

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L P GQFG+R  GGKD ASARYI T L+ ITR++FP+ DD LL Y  +DGQ +EP +Y+P
Sbjct: 744  LLPKGQFGSRAMGGKDHASARYISTALNKITRYIFPEQDDHLLKYQEDDGQMVEPEYYVP 803

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTA 910
            IIP  LVNG+EGIGTGWS+ I NYNP ++V  ++  L+G+  +PM P+YR F G IE   
Sbjct: 804  IIPMSLVNGAEGIGTGWSTSIQNYNPIELVNQIKNRLDGQPFQPMTPFYRNFDGIIENLP 863

Query: 911  SKEAGVTYTVTGIIEEVNETT--LRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYS 968
            +        + GII + NE T  + I+ELPI++WT++Y+E+L+  + +  S I   R+Y 
Sbjct: 864  NGNG----IIKGII-DCNEATDIITIRELPIKKWTRNYKEWLDKEMAEEGSQIVDLREYH 918

Query: 969  DDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
                + FE+ + +  +   K    L+ FKL+T  S SNM LFDS   IKKY+    I+EE
Sbjct: 919  TKYKIHFEIQMVDGFVSDLKNP--LEYFKLSTPASCSNMVLFDSNNKIKKYECVSDIMEE 976

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            F+ +RL+FY KRK+  +  L+ E+  L+NK++FI  V++ EI + N K+ DL+ +L + G
Sbjct: 977  FYQVRLQFYHKRKEYLVSKLDREVQLLDNKLKFIKMVISEEIQIRNVKKIDLVKQLDKNG 1036

Query: 1089 FTPFPK--NSKSIEAVVAGAT--------DETEESEENPE------------VVNGVQSI 1126
            FT F +    KS +    G +        D+  E E+  E             +    SI
Sbjct: 1037 FTRFSQLIQVKSTKVKAFGDSQKQKKNVDDDESEDEQVSEDEDKQQKKQIQKKLQSTPSI 1096

Query: 1127 D---YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
            D   ++YLLSM + +LT EKV+ L  + ++  +  + L       +W +DLD      +E
Sbjct: 1097 DISEFNYLLSMPLFSLTYEKVEKLQEELNQRVQSREALVNKEISLMWREDLDKFLEAYEE 1156

Query: 1184 LDKSDARAEEERMKIKG 1200
            +++ + R   ++ K+ G
Sbjct: 1157 MNEIELRLINKQEKMPG 1173


>gi|440796916|gb|ELR18016.1| DNA gyrase/topoisomerase IV, A subunit [Acanthamoeba castellanii str.
            Neff]
          Length = 1137

 Score = 1024 bits (2648), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/1082 (48%), Positives = 717/1082 (66%), Gaps = 114/1082 (10%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES--KTMIHRTISYVPG 78
             A  K +EE+YQ+K+ +EH+LLRPD+Y          LW+   +S     + R   YVP 
Sbjct: 101  AAGEKALEEVYQRKTPVEHVLLRPDSY---------ELWVLSAQSGHPKAVLRECGYVPA 151

Query: 79   LYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
            LYKIFDEILVNAADNKQRDP M  +KV ID E   I + N G G+PV +H++EG+Y+PEL
Sbjct: 152  LYKIFDEILVNAADNKQRDPNMTTIKVWIDAEQGSIRILNDGQGIPVHVHKQEGLYLPEL 211

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            +FGHLLT SN+DD+V K TGGRNGYGAKL NIFS EF +ET D KR  K+ Q + +NM  
Sbjct: 212  LFGHLLTGSNFDDSVAKVTGGRNGYGAKLANIFSKEFTVETVDCKRGFKFVQTWRDNMST 271

Query: 199  KSEPNISKC----KEGDNWTKVSFKPDLAKFNMTHL-EDDVVALMKKRVVDLAGCLGKSV 253
               P +S      +E  ++T V+FKPDL++F M  L +DD++++M  RV D+AGC  +++
Sbjct: 272  TDGPRVSPLTQQEQEAKDYTVVTFKPDLSRFGMQTLKDDDILSVMNMRVYDVAGC-NETL 330

Query: 254  KVELNGHRVPVKSFAEYVDMY--PKSVTR--FHERVNERWEICVTLSE-GQFQQVSFVNG 308
            KV LN   +P  SF +Y+ +Y  P+ V      +++N+RW++ V +S+ GQF  +SFVN 
Sbjct: 331  KVYLNERPLP-GSFKDYLSLYYGPEVVEEAFVFDKINDRWQVGVGISDSGQFSSISFVNS 389

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQT 368
            I T +GGTHV+Y+A+QV  +V+  +NK + +  V+  +VKNHL VFVNAL++NP+FDSQT
Sbjct: 390  INTRRGGTHVNYIADQVVKYVVDKINKTDPDLKVQPAHVKNHLTVFVNALVENPSFDSQT 449

Query: 369  KETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL--KKNDGTKTEDV 426
            KETLT R  +FGS C+LS + L  +  ++ IV+T+  W   KQS DL  K   G     +
Sbjct: 450  KETLTTRPRNFGSDCQLSTQLLDNILERTRIVDTVSRWMYMKQSSDLARKAASGRSGTRI 509

Query: 427  RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
             GI KL+DANLAG  NS+ CTLILTEGDSAK+LA+AGLS++GRD +GV+PL+GKLLNVR+
Sbjct: 510  YGIPKLDDANLAGSANSKDCTLILTEGDSAKSLAVAGLSILGRDHYGVYPLKGKLLNVRD 569

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEYNNVKS-------------LRYGHLMIMTDQVLL 533
            A+  Q+L N EI  I  ILGL     Y++ ++             LRYG +M+MTDQ   
Sbjct: 570  ATHRQLLENKEINEITTILGLNHERTYSDAEATDAEQSGEVASDGLRYGKVMLMTDQ--- 626

Query: 534  APLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITP 593
                                     DHDGSHIKGL INF+H FWPSLL+   ++ EFITP
Sbjct: 627  -------------------------DHDGSHIKGLFINFLHRFWPSLLE-KGYVEEFITP 660

Query: 594  IVKATNKNG------KVLSFYSMPDYEAWKESLG-GNASSWSIKYYKGLGTSTSKEGKEY 646
            IVKAT K        KV  F+++P+Y+ WKE L     S W IKYYKGLGT+T++EGKEY
Sbjct: 661  IVKATKKGAGNKKEEKV--FFAIPEYQRWKEELDPAEKSKWRIKYYKGLGTNTTEEGKEY 718

Query: 647  FQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQF------EPGNH-------- 692
            F+ +  H+  F W+ +QDG  I++AFSK ++E RK+WL+ F         +H        
Sbjct: 719  FKALGKHRIGFEWQGEQDGRQIDMAFSKDQVEQRKQWLMAFYEEQKQRVADHNYDVPLYS 778

Query: 693  -----LDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIK 747
                  D++ + I YSDF+NKEL+LFS AD  RSIPS++DGLKPGQRK+L+  FKR    
Sbjct: 779  EDLFKKDEEARMISYSDFINKELVLFSNADNIRSIPSVIDGLKPGQRKVLYACFKRKLHS 838

Query: 748  EAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDA 807
            E KVAQ +GYVSE +AYHHGE SL STI+ MAQ+F GSNN+ LL P GQFGTR QGGKDA
Sbjct: 839  EMKVAQLAGYVSEQTAYHHGEASLHSTIVHMAQNFPGSNNVPLLYPAGQFGTRLQGGKDA 898

Query: 808  ASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI---- 863
            ASARYIFTRL P  R LF ++DD LL+YL+EDG+Q++P +++P++PT+L+NG EG+    
Sbjct: 899  ASARYIFTRLDPAARLLFREEDDHLLNYLDEDGEQVQPQYFVPVLPTILLNGCEGLAEIM 958

Query: 864  --------GTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAG 915
                    GTGWS+ IP+YNP  I+ N+RR + G+ ME + PWYRG  G I +   K+  
Sbjct: 959  CRRSRVYQGTGWSTQIPSYNPLQIIENLRRKIEGKEMEKIAPWYRGLQGPILR---KKGS 1015

Query: 916  VTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ----NDSFIRGFRQYSDDT 971
             +Y   G++E++N TT+RI +LP +RWT  Y+EFL+ +         + I+GF+++  + 
Sbjct: 1016 PSYVSIGLVEKINPTTIRISDLPAKRWTATYKEFLDQMAKPPRRGRRALIKGFKEHHTEN 1075

Query: 972  TVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFH 1031
            +VDF V++++E M   +  GL++ FKL + IS +NMHLFD  G I++++ P +I++EFF 
Sbjct: 1076 SVDFHVYMTKEQMELAESVGLVEHFKLYSQISLNNMHLFDKDGKIRRFECPLEIIDEFFP 1135

Query: 1032 IR 1033
            +R
Sbjct: 1136 LR 1137


>gi|328871183|gb|EGG19554.1| DNA topoisomerase II [Dictyostelium fasciculatum]
          Length = 1574

 Score = 1019 bits (2634), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/950 (55%), Positives = 666/950 (70%), Gaps = 49/950 (5%)

Query: 17   VVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYV 76
            +V  +   KT+EE+YQKK  L+ ILLRPDTYIGSIEK  + LWI+E +   M  R   +V
Sbjct: 133  IVSSSGKEKTVEEIYQKKDLLDQILLRPDTYIGSIEKQEEELWIWENDR--MKKRKTVFV 190

Query: 77   PGLYKIFDEILVNAADNKQRD--PKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVY 134
            PGLYKIFDEILVNAADN QR     M ++KV I+   + ISV N G GVPVE+H+ E + 
Sbjct: 191  PGLYKIFDEILVNAADNLQRKDGQPMKSIKVEINANDNRISVWNDGKGVPVEMHKGEKMQ 250

Query: 135  VPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTN 194
            VPEL+FGHLLTSSNYDD+ ++  GGRNG+GAKLTN FS +F++E AD  R K +KQ FT 
Sbjct: 251  VPELVFGHLLTSSNYDDSEERLAGGRNGFGAKLTNAFSQKFLVECADSARKKLFKQTFTK 310

Query: 195  NMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK-KRVVDLAGCLGKSV 253
            NM ++ EP I    +  ++TK++F PDLA+F MT L+DD    +  KRV D+AGC  +S+
Sbjct: 311  NMKQRDEPVIESYTKATDYTKITFHPDLARFGMTRLDDDDNLELLTKRVYDIAGC-NQSL 369

Query: 254  KVELNGHRVPVKSFAEYVDMYPK----SVTRFHERVNERWEICVTLSEGQFQQVSFVNGI 309
            KV LNG  +   SF +Y+D Y K    +    +ERVN RWEI V  S+G  QQVSFVN I
Sbjct: 370  KVYLNGKLIGFNSFTDYIDTYFKDDENAPVVVYERVNPRWEIAVACSDGTPQQVSFVNSI 429

Query: 310  ATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQT 368
             T KGGTHV Y   ++   ++A V KKNK    +K   VKNHL++FVN LI NPAFDSQT
Sbjct: 430  CTNKGGTHVTYALTKITEAIIAQVAKKNKGGIEMKPSFVKNHLFIFVNCLIVNPAFDSQT 489

Query: 369  KETLTLRQSSFGSKCELSEEFLKKVT-AKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
            KET + + S++GS C  S++FLK V   K+GIV+ ++SWA  K++ DLKK     T+  R
Sbjct: 490  KETCSSKVSTYGSTCIPSDKFLKSVCETKTGIVDQIISWAKHKETVDLKKTTPKATKKGR 549

Query: 428  -GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
              I KL++AN AG + SE CTLILTEGDSAK LA AG+SVVG D +GVFPLRGK++NVRE
Sbjct: 550  LNIEKLDEANFAGTKKSEDCTLILTEGDSAKTLATAGISVVGWDHYGVFPLRGKVINVRE 609

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIF 546
             S   +L N EI NI +I+G +  V Y+N+ +LRYGHLMIMTD                 
Sbjct: 610  VSHRSILANEEIRNIFEIMGFQHNVNYDNISTLRYGHLMIMTD----------------- 652

Query: 547  AWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS 606
                       QDHDGSHIKGL++NFIH FWPSLLKI  FL+EFITPI+KA     K +S
Sbjct: 653  -----------QDHDGSHIKGLILNFIHHFWPSLLKIDGFLMEFITPIIKAFKGKNKPIS 701

Query: 607  FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
            FY++P+Y  WKE+ GG    + IKYYKGLGTS ++EGKEYF +I  HK DF W+D+ D +
Sbjct: 702  FYTIPEYLKWKETNGGKG--YEIKYYKGLGTSKAEEGKEYFADIERHKLDFQWDDNAD-D 758

Query: 667  AIELAFSKKKIEARKKWLLQFEPGNHLDQ-KEKYIKYSDFVNKELILFSMADLQRSIPSM 725
            +I++AF+KK+ + RKKWL  FEPG +LDQ   K IK S+F+NKELILFS+AD +RSIPS+
Sbjct: 759  SIDMAFNKKRADDRKKWLNDFEPGTYLDQYGAKKIKISEFINKELILFSIADCERSIPSI 818

Query: 726  VDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGS 785
            VDGLK  QRKIL+  FKRN  KE +VAQ  GYVSEHSAYHHGE SLASTI+ MAQD+VGS
Sbjct: 819  VDGLKISQRKILYSCFKRNLKKELRVAQLIGYVSEHSAYHHGEASLASTIINMAQDYVGS 878

Query: 786  NNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEP 845
            NNIN L P+G FG+R QGGKD++  RYI T L  ITR LF +DDD LL Y+N+DG++++P
Sbjct: 879  NNINTLYPSGSFGSRLQGGKDSSQPRYIHTCLRDITRTLFHQDDDNLLTYVNDDGKKVQP 938

Query: 846  TWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGT 905
             WYMP IP VLVNGS GIGTG+SS IPNYNPRD++  +R LL+ + M  + PWYRGF G+
Sbjct: 939  KWYMPTIPFVLVNGSSGIGTGYSSSIPNYNPRDLIQCMRDLLDEKEMTDIKPWYRGFRGS 998

Query: 906  IEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID 955
            IE  + +    TY   G  ++++E  L + ELPI  WTQ ++E LE ++D
Sbjct: 999  IEPKSHQ----TYLCKGAWKKLSEYELEVTELPIGTWTQSFKELLELLVD 1044



 Score =  102 bits (254), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 137/273 (50%), Gaps = 30/273 (10%)

Query: 961  IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYD 1020
            ++ F+ YS +  + F +     ++    +  + K FKLTT ++ +NM LFD  GV++KYD
Sbjct: 1105 VKKFQNYSTEAVIHFVI----TTVKPVDEIDVEKVFKLTTNLNETNMTLFDEHGVLRKYD 1160

Query: 1021 TPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDL 1080
            T   I++ FF +RL+ Y+ RK   +  L  E  +L N+ RFI  V+  E+V+ N K+ DL
Sbjct: 1161 TTSSIIKIFFTLRLQHYQMRKDYLISKLTEEFSRLSNRARFIQAVITKELVIANVKKIDL 1220

Query: 1081 LLELRQKGFTPFPKN-------------SKSIEAVVAGATDETEESEENPEVVNGVQSID 1127
            + +L+   F  F KN             SK+ +       +  +E   N       +  D
Sbjct: 1221 IKKLKDMKFDKFTKNATKAAKGKLDSKKSKTEQEEELLGEESDDEGGANKSDAEEEEQDD 1280

Query: 1128 ----YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
                YDYLLSM + +LT+E+ + +L +RD+   E+D +       ++  DL  L+ +LD 
Sbjct: 1281 DTKGYDYLLSMPLWSLTMERAKKILEERDQKKGELDKMVGTPINKIYKNDLKTLEEELDI 1340

Query: 1184 LDKSDARAEEERMKIKGNGNGDAGPKIVAKRAP 1216
             D      E++R+ +K    G+A  K+   + P
Sbjct: 1341 QD------EDDRLLLK---KGEALQKVSKGKKP 1364


>gi|33636521|gb|AAQ23558.1| RE49802p [Drosophila melanogaster]
          Length = 1157

 Score = 1011 bits (2613), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 541/1105 (48%), Positives = 728/1105 (65%), Gaps = 98/1105 (8%)

Query: 133  VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVF 192
            +YVP +IFGHLLTSSNY+D+ KK TGGRNGYGAKL NIFST F +ETA  +  K +KQ +
Sbjct: 1    MYVPTMIFGHLLTSSNYNDDEKKVTGGRNGYGAKLCNIFSTSFTVETATREYKKSFKQTW 60

Query: 193  TNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKS 252
             NNMGK S+  I K   G ++T+++F PDLAKF M  L++D+VALM +R  D+A    K 
Sbjct: 61   GNNMGKASDVQI-KDFNGTDYTRITFSPDLAKFKMDRLDEDIVALMSRRAYDVAAS-SKG 118

Query: 253  VKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVS 304
            V V LNG+++ V++F +Y+D++ K+        +   HE  NERWE+    S+  FQQVS
Sbjct: 119  VSVFLNGNKLGVRNFKDYIDLHIKNTDDDSGPPIKIVHEVANERWEVACCPSDRGFQQVS 178

Query: 305  FVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPA 363
            FVN IAT KGG HVD+V + +   ++ V+ KKNK   N+K   V+NHLWVFVN LI+NP 
Sbjct: 179  FVNSIATYKGGRHVDHVVDNLIKQLLEVLKKKNKGGINIKPFQVRNHLWVFVNCLIENPT 238

Query: 364  FDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKT 423
            FDSQTKE +TL+Q  FGSKC LSE+F+  ++ KSGIVE++L+WA FK   D+ K  G K+
Sbjct: 239  FDSQTKENMTLQQKGFGSKCTLSEKFINNMS-KSGIVESVLAWAKFKAQNDIAKTGGRKS 297

Query: 424  EDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLN 483
              ++GI KLEDAN AGG+NS +CTLILTEGDSAK+LA++GL V+GRD +GVFPLRGKLLN
Sbjct: 298  SKIKGIPKLEDANEAGGKNSIKCTLILTEGDSAKSLAVSGLGVIGRDLYGVFPLRGKLLN 357

Query: 484  VREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLL 540
            VREA+  Q+  N+EI N+ KI+GL+   +Y   +++K+LRYG +MIMTDQ          
Sbjct: 358  VREANFKQLSENAEINNLCKIIGLQYKKKYLTEDDLKTLRYGKVMIMTDQ---------- 407

Query: 541  WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK 600
                              D DGSHIKGLLINFIH+ WP LL++P FL EFITPIVKAT K
Sbjct: 408  ------------------DQDGSHIKGLLINFIHTNWPELLRLP-FLEEFITPIVKATKK 448

Query: 601  NGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE 660
            N + LSFYS+P++E WK     N  +++IKYYKGLGTSTSKE KEYFQ++  H+  F ++
Sbjct: 449  NEE-LSFYSLPEFEEWKNDTA-NHHTYNIKYYKGLGTSTSKEAKEYFQDMDRHRILFKYD 506

Query: 661  DDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQ---------KEKY--------IKYS 703
               D E+I +AFSKK IE+RK WL      NH+D+          E+Y        I Y+
Sbjct: 507  GSVDDESIVMAFSKKHIESRKVWLT-----NHMDEVKRRKELGLPERYLYTKGTKSITYA 561

Query: 704  DFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSA 763
            DF+N EL+LFS AD +RSIPS+VDGLKPGQRK++F  FKRN  +E KVAQ SG V+E SA
Sbjct: 562  DFINLELVLFSNADNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLSGSVAEMSA 621

Query: 764  YHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRF 823
            YHHGE SL  TI+ +AQ+FVG+NNINLL+P GQFGTR  GGKD ASARYIFT +SP+TR 
Sbjct: 622  YHHGEVSLQMTIVNLAQNFVGANNINLLEPRGQFGTRLSGGKDCASARYIFTIMSPLTRL 681

Query: 824  LFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANV 883
            ++   DD LLDY  +DGQ+IEP WY+PIIP VLVNG+EGIGTGWS+ I NYNPR+I+ N+
Sbjct: 682  IYHPLDDPLLDYQVDDGQKIEPLWYLPIIPMVLVNGAEGIGTGWSTKISNYNPREIMKNL 741

Query: 884  RRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWT 943
            R+++NG+    MHPWY+ F G +E  +       Y  TG I+ ++   L I ELP+  WT
Sbjct: 742  RKMINGQEPSVMHPWYKNFLGRMEYVSDGR----YIQTGNIQILSGNRLEISELPVGVWT 797

Query: 944  QDYREFLESIIDQNDSFIRG----FRQYSDDTTVDFEVFLSEESMMRTKQE--GLLKKFK 997
            Q+Y+E +   +      ++G    +R+Y  DTTV F +  +     R   E  G  + FK
Sbjct: 798  QNYKENVLEPLSNGTEKVKGIISEYREYHTDTTVRFVISFAPGEFERIHAEEGGFYRVFK 857

Query: 998  LTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLEN 1057
            LTTT+ST+ MH FD    ++++ T   IL+E++ +R E+Y +R+   +  L  +  +L +
Sbjct: 858  LTTTLSTNQMHAFDQNNCLRRFPTAIDILKEYYKLRREYYARRRDFLVGQLTAQADRLSD 917

Query: 1058 KVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP------------------KNSKSI 1099
            + RFIL     ++VV N++R  +  EL ++G+ P P                  ++ +  
Sbjct: 918  QARFILEKCEKKLVVENKQRKAMCDELLKRGYRPDPVKEWQRRIKMEDAEQADEEDEEEE 977

Query: 1100 EAVVAGATDETEESEENPE-VVNGVQSI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEE 1157
            EA  + ++   +E E +PE     +  +  +DYLL M++  LT EK   LL  RD    E
Sbjct: 978  EAAPSVSSKAKKEKEVDPEKAFKKLTDVKKFDYLLGMSMWMLTEEKKNELLKQRDTKLSE 1037

Query: 1158 VDDLRKATPESLWVKDLDALDMQLD 1182
            ++ LRK TPE LW+ DLDAL+ +L+
Sbjct: 1038 LESLRKKTPEMLWLDDLDALESKLN 1062


>gi|361127443|gb|EHK99411.1| putative DNA topoisomerase 2 [Glarea lozoyensis 74030]
          Length = 1656

 Score = 1001 bits (2589), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 547/1213 (45%), Positives = 754/1213 (62%), Gaps = 128/1213 (10%)

Query: 14   NANVVGPT----APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI 69
            N N+ GP+      +KT  + YQK SQ EHIL+RPDTYIGS+E+  Q +W++  E+  M 
Sbjct: 133  NMNLDGPSESKKPKDKTATQKYQKLSQYEHILVRPDTYIGSVEQTEQQMWVFNSETSQME 192

Query: 70   HRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQ 129
             R +S+VPGLYKIFDEILVNAADNKQ DP M A+KV I++E   ISV N G G+P+EIH+
Sbjct: 193  FRKVSFVPGLYKIFDEILVNAADNKQNDPNMKAIKVQINRETGEISVENDGAGIPIEIHE 252

Query: 130  EEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYK 189
                          + +S                             IET D KR K+YK
Sbjct: 253  --------------VCAS-----------------------------IETQDSKRGKRYK 269

Query: 190  QVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCL 249
            Q +T+NM K  +P IS  K  D +T+V++  D +KF M  ++DD  AL+K+RV D+AG +
Sbjct: 270  QTWTDNMSKMGKPKISASKSPD-FTRVTWTADYSKFKMNGMDDDFEALVKRRVYDMAGTV 328

Query: 250  GKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHE------------------RVNERWEI 291
             K VKV LNG ++ + +F +Y +MY K++ +                     + ++ WE+
Sbjct: 329  -KDVKVSLNGVKLNL-NFKKYCEMYAKAIQKERGEGEEGEKPAMATVILEDPKAHQCWEV 386

Query: 292  CVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKN-KNANVKAHNVKNH 350
               +S+G F QVSF N IAT  GGTHV+Y+A+Q+   ++ VV KKN K A +KA  ++NH
Sbjct: 387  AFAVSDGSFHQVSFANSIATTSGGTHVNYIADQIVEKLLDVVKKKNSKGAALKAGQIRNH 446

Query: 351  LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFK 410
            +++FVNALI NPAF SQTKE LT  +  FGSKC L+ +FL  +  K+  V+ +L++   K
Sbjct: 447  IFLFVNALIVNPAFTSQTKEQLTTLKGKFGSKCILTPKFLNDI-GKTEAVQNILNFQAAK 505

Query: 411  QSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD 470
              + L K+DG K   +   +KL DANLAG +   +CTLILTEGDSAK LA+AG +V+  D
Sbjct: 506  ADQQLAKSDGNKRSRMSN-AKLVDANLAGTKRGHECTLILTEGDSAKGLAVAGRAVLDPD 564

Query: 471  RFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQ 530
            R GVFPLRGKLLNVR+A   Q+  N+EI NIK+ LGLK    Y + K LRYGHLMIM DQ
Sbjct: 565  RIGVFPLRGKLLNVRDAGIEQITKNAEIQNIKQFLGLKHKHIYTDTKGLRYGHLMIMADQ 624

Query: 531  VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
                                        DHDGSHIKGLLINF+   +PSLLK+P F  EF
Sbjct: 625  ----------------------------DHDGSHIKGLLINFLQVQFPSLLKLPDFFREF 656

Query: 591  ITPIVKA-----TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKE 645
            ITPIVK        K     SF+++P+YE+WKE    +   W  KYYKGLGTS  ++ + 
Sbjct: 657  ITPIVKVWKGPNPKKPINSKSFFTLPEYESWKERHATD-HGWKHKYYKGLGTSLPEDAQV 715

Query: 646  YFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDF 705
            YF N+  H ++F     ++   ++L F+KK+ + RK+WL  F PG  LD   K + Y+DF
Sbjct: 716  YFSNLDQHLREFESITHEEEGMLDLVFNKKQADNRKRWLGNFMPGTFLDHSTKTLTYNDF 775

Query: 706  VNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYH 765
            +NKELILFSMAD  RSIPS++DG KPGQRK+++  FKRN +K+ KV +  GYVSE++AYH
Sbjct: 776  INKELILFSMADNIRSIPSVIDGFKPGQRKVMYACFKRNLVKDMKVVELGGYVSENTAYH 835

Query: 766  HGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLF 825
            HGE S+  TI+G+AQ+FVGSNNIN L+P+G FG+R  GG DAAS RYIFTRLSP  R +F
Sbjct: 836  HGETSMHMTIIGLAQNFVGSNNINCLEPSGNFGSRLAGGTDAASPRYIFTRLSPFARRVF 895

Query: 826  PKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRR 885
               D+ L ++  +DG+ IEPT + P+IP VLVNG++GIGTGWS+ IPNY+P  IV N++R
Sbjct: 896  SAQDEPLYEHNVDDGKIIEPTMFCPVIPMVLVNGADGIGTGWSTTIPNYHPLHIVENLKR 955

Query: 886  LL------NGEMMEP---MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKE 936
             +      NGE  EP   M PW+RG+ G  E          +   GI+ E     + I E
Sbjct: 956  RMGRLDHQNGE-EEPFITMVPWFRGWKGIAEPAGPNR----FNFNGIVREAANNEVEITE 1010

Query: 937  LPIRRWTQDYREFLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLK 994
            LPIR WT D++  LE II  ++  SFI+ +++Y+D  +V+F V L E++M   K++GL +
Sbjct: 1011 LPIRVWTDDFKAKLEEIIKGEKTPSFIKDYKEYNDHKSVNFIVQLDEKNMKGVKEDGLAE 1070

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
            +FKL  TI+TSN+  FD+ G I+KY+T E +LEE++  RL  Y KRK+  ++ + +E  K
Sbjct: 1071 RFKLNKTIATSNLVAFDTNGQIRKYETVEAVLEEYYVYRLAMYTKRKEYWVKKINIEYRK 1130

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESE 1114
            L+N+ RF+L +++ ++VV+ +K+  L+ ELR+  +  FPK S   +A  +G TD+T E+E
Sbjct: 1131 LKNQARFVLEIIDNKLVVSKKKKPVLVAELRKANYEAFPKVS---DAKKSGETDDTVENE 1187

Query: 1115 ENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDL 1174
            E   V     + D+DYLL M I +LT E+V  L A      EE   L + + + LW +DL
Sbjct: 1188 EEVAVDEDSGARDFDYLLGMPIWSLTQERVDKLKAQMLAKKEEQTALERLSEKDLWCQDL 1247

Query: 1175 DAL----DMQLDE 1183
            DA     ++QL E
Sbjct: 1248 DAFVNEWEVQLQE 1260


>gi|325191142|emb|CCA25924.1| DNA topoisomerase putative [Albugo laibachii Nc14]
          Length = 1141

 Score =  998 bits (2580), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/1186 (45%), Positives = 743/1186 (62%), Gaps = 111/1186 (9%)

Query: 47   YIGSIEKHTQALWIYEEESK----TMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDA 102
            YIGS+E+ T+ +W+  E +      M   +I YVP LYKIFDEI+VNA DNK+RD KM A
Sbjct: 2    YIGSMEEVTENVWVVNENTVGNIVEMYLESIEYVPALYKIFDEIIVNALDNKKRDCKMKA 61

Query: 103  VKVVID---QEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGG 159
            + VVID   ++   I ++N G G+PV+IH  E +Y+PEL+FG+LLT SN+DD+  + TGG
Sbjct: 62   LDVVIDTTNEKQPWIMIYNDGRGIPVQIHPTEQIYIPELVFGNLLTGSNFDDHSTRFTGG 121

Query: 160  RNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG-DNWTKVSF 218
            R+GYGAKLTNIFS  FI+ET D     KYKQ++ NNM +  EP+I     G  ++T++SF
Sbjct: 122  RHGYGAKLTNIFSNTFIVETGDTVTGMKYKQIWRNNMRELEEPHIEPLSAGVKDYTRISF 181

Query: 219  KPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV 278
             PDL  F +  L  D++ L+KKRV D+AGC+   VKV LNG  +P+  F  Y+  +    
Sbjct: 182  SPDLKLFQLESLSTDILRLLKKRVYDVAGCV-DDVKVSLNGSVIPISGFESYIRGF---- 236

Query: 279  TRFHE--------------RVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQ 324
              FH+              RVN+ W I V  SE  F QVSFVNGI+T++GGTHV +V  Q
Sbjct: 237  -EFHQKLSTTKGNSNCVTSRVNKHWHIGVLPSEVGFTQVSFVNGISTLRGGTHVLHVVEQ 295

Query: 325  VANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE 384
            +   V   + KK    N     VK +L V++N +I+NP FDSQ KE LT R SSFG+ C 
Sbjct: 296  ITRRVADHIVKKYSEINATPAQVKPYLAVYINCMIENPTFDSQMKECLTSRPSSFGTLCN 355

Query: 385  LSEEFLKKVTAKSGIVETLLSWANFKQ-SKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            L E F K V   +GIVE  +     KQ S  +KK    +++ +  + KLEDANLAGG  S
Sbjct: 356  LPERFFKAVIRDTGIVEHTVQGIRSKQRSALMKKVSTARSKSIFNVPKLEDANLAGGSQS 415

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
             +C+LILTEGDSAKALA+AGL+VVGRDRFGVFPLRGKLLNVR+A+ NQ+  NSE  N+  
Sbjct: 416  HECSLILTEGDSAKALAVAGLAVVGRDRFGVFPLRGKLLNVRDATVNQLSKNSEFMNLCT 475

Query: 504  ILGLKQGVEYNNVK---SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDH 560
            ILGL+ G  Y+ +K    LRYGH+++MTDQ                            D+
Sbjct: 476  ILGLQMGESYDTIKKRQQLRYGHVIVMTDQ----------------------------DY 507

Query: 561  DGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK----NGKVLSFYSMPDYEAW 616
            DGSHIKGLL N  H+FWP+LL+   F+  F+TPI+KAT+K    + KVLSFYS+P+Y  W
Sbjct: 508  DGSHIKGLLFNIFHTFWPNLLRSSEFIQVFVTPIIKATSKRDSKHEKVLSFYSLPEYLDW 567

Query: 617  KESLGGN-ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKK 675
            ++SL  N   ++ IKYYKGLGTSTS E +EYF N+  H     W+ ++DG+ +E+ FSK 
Sbjct: 568  RKSLAANEGKNYYIKYYKGLGTSTSAEAREYFSNLNKHLIQMKWQSEEDGQLLEMVFSKS 627

Query: 676  KIEARKKWLLQ-FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            +   RK WLLQ ++  + L +K+    Y DFVN+ELI FS AD  RSIPS +DGLK  QR
Sbjct: 628  RACDRKNWLLQNYDSSSFLCRKQGVFSYKDFVNQELIQFSHADNTRSIPSAIDGLKTSQR 687

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+LF   KR   +E KVAQ +GY SEH+AYHHGE SL STI+ MAQD+VGSNNI LL P+
Sbjct: 688  KVLFACLKRKLFQEMKVAQLAGYCSEHTAYHHGEASLHSTIVNMAQDYVGSNNITLLYPS 747

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            GQFGTR QGGKDAAS RYIFT+L+  TR ++P++DD LL+Y ++DG  +EP +Y+PIIP 
Sbjct: 748  GQFGTRLQGGKDAASPRYIFTKLNKHTRLIYPEEDDALLNYNDDDGISVEPQYYVPIIPM 807

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL-------NGEMMEPMHPWYRGFGGTIE 907
            +L+NGSEGIGTGWS+YIPN+NP +++  +  LL       +G     + PW+RGF G+IE
Sbjct: 808  LLINGSEGIGTGWSTYIPNHNPIEVIDRMLHLLDSSNSRDHGVPPASLLPWFRGFRGSIE 867

Query: 908  KTASKEAGV-TYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQ 966
                  AG+ TYT  G I  +N TTL I ELPI +W  DY++ L   + +    IR F +
Sbjct: 868  A-----AGLQTYTTQGTIRHLNPTTLEILELPIGKWIDDYKKTLWDFLQKK--LIRSFTE 920

Query: 967  YSDDTTVDFEVFLSEES---MMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPE 1023
            +  +  V F + LS       +      L++ FKL + ++T+NMH FD    ++++ + +
Sbjct: 921  HHSEEHVCFRIQLSRADSTFFLDMSPIELVRFFKLESKLNTNNMHAFDPNYTLQRFSSSD 980

Query: 1024 QILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI-VVNNRKRT--DL 1080
             +++ F  +RL+ Y +RK+  ++  + ++L+L+N+VRFI  V  G++  +  RK T   +
Sbjct: 981  DVIKAFLPVRLDLYNRRKEYLVKKQQCDVLELQNRVRFIAQVSAGDLQCILTRKMTKHQV 1040

Query: 1081 LLELRQKGFTP---FPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIG 1137
               L  +G+TP   F  + KS              + +NP       + D+DYLL+M++ 
Sbjct: 1041 AAVLDSQGYTPEQEFRYDEKS--------------TNDNP-------ASDFDYLLNMSMW 1079

Query: 1138 TLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
            + TL+K   L  +  +   E+  L+K TPE +W ++L  L  +L E
Sbjct: 1080 SFTLDKANRLEKEHLERLTELRKLQKTTPEEMWRRELLTLRGKLVE 1125


>gi|301626919|ref|XP_002942632.1| PREDICTED: DNA topoisomerase 2-alpha, partial [Xenopus (Silurana)
            tropicalis]
          Length = 1458

 Score =  998 bits (2579), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 594/1355 (43%), Positives = 799/1355 (58%), Gaps = 148/1355 (10%)

Query: 1    MTVDKRLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWI 60
            M  D   PL       V        ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+
Sbjct: 1    METDPLQPLENKTVGKVKKSDNKRLSVERIYQKKTQLEHILLRPDTYIGSVEPVTQQMWV 60

Query: 61   YEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSG 120
            ++E+ + +  R +++VPGLYKIFDEILVNAADNKQRDP M  +K+ I+ E + +SV N+G
Sbjct: 61   FDED-EGLNCRDVTFVPGLYKIFDEILVNAADNKQRDPTMSCIKITINPESNTVSVWNNG 119

Query: 121  DGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETA 180
             G+PV  H+ E V+VP LIFG LLTSSNYDD+ KK TGGRNGYGAKL NIFS +F +ETA
Sbjct: 120  KGIPVVEHKVEKVFVPALIFGQLLTSSNYDDDQKKVTGGRNGYGAKLCNIFSNKFTVETA 179

Query: 181  DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKK 240
              +  K +KQ +T+NM   ++  I K  +G+++T ++F+PDL+KF M  L+ D+VALM +
Sbjct: 180  CREYKKVFKQTWTDNMSDAADAKI-KPFDGEDYTCITFQPDLSKFKMQILDKDIVALMSR 238

Query: 241  RVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEIC 292
            R  D+AG   K VKV LNG R+P+  F  YVD+Y K+        +   HE VN+RWEIC
Sbjct: 239  RAYDVAGS-SKGVKVFLNGKRLPISGFRSYVDLYLKNKLDETGNPLKVMHELVNDRWEIC 297

Query: 293  VTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHL 351
            +T+SE  FQQ+SFVN IAT KGG HVDYVA+Q+   ++ VV KKNK    VK   VKNH+
Sbjct: 298  LTMSEKGFQQISFVNSIATTKGGRHVDYVADQIIAKLIEVVKKKNKGGIAVKPFQVKNHM 357

Query: 352  WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQ 411
            WVFVN+LI+NP FDSQTKE +TL+  SFGSKC LSE+F+K  T   GIVE++L+W  FK 
Sbjct: 358  WVFVNSLIENPTFDSQTKENMTLQSKSFGSKCTLSEKFIKGAT-NCGIVESILNWVKFKA 416

Query: 412  SKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD 470
               L KK    K   ++GI KL+DAN AG RNS  CTLILTEGDSAK LA++GL VVGRD
Sbjct: 417  QTQLNKKCSSVKHTKIKGIPKLDDANDAGSRNSLDCTLILTEGDSAKTLAVSGLGVVGRD 476

Query: 471  RFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIM 527
            R+GVFPLRGKLLNVREAS  Q++ N+EI NI KI+GL+    Y++   +K+LRYG +MIM
Sbjct: 477  RYGVFPLRGKLLNVREASHKQIMENAEINNIIKIVGLQYKKNYDDNESLKTLRYGKVMIM 536

Query: 528  TDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFL 587
            TDQ                            D DGSHIKGLLINFIH  WPSLLK   FL
Sbjct: 537  TDQ----------------------------DQDGSHIKGLLINFIHHNWPSLLK-HRFL 567

Query: 588  VEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYF 647
             EFITPI+K T K+ + LSFYS+P++E WK +   +  +W IKYYKGLGTSTSKE KEYF
Sbjct: 568  EEFITPIIKVT-KSKQELSFYSIPEFEEWKNNTDSH-KTWKIKYYKGLGTSTSKEAKEYF 625

Query: 648  QNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHLDQK 696
             ++  H+  F +E   D  AI LAFS+KK++ RK+WL  F            P  +L  K
Sbjct: 626  SDMERHRIPFKYEGPIDDAAITLAFSRKKVDDRKEWLTNFMQDRRERRLHGLPEEYLYGK 685

Query: 697  E-KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFS 755
              KY+ ++DF+NKEL+              VD                            
Sbjct: 686  STKYLTFNDFINKELM-------------HVD---------------------------- 704

Query: 756  GYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFT 815
             YV+        +Q +A  I  + +   G   +   Q N  FG        A   +Y+ T
Sbjct: 705  -YVA--------DQIIAKLIEVVKKKNKGGIAVKPFQKNHFFGAYMH----ARQPQYLCT 751

Query: 816  RLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYN 875
             + P+ R LFP  DD +L ++ +D Q++EP WY+PIIPTVLVNG+EGIGTGWS  IPNY+
Sbjct: 752  MVPPLARLLFPAMDDSVLKFMYDDNQKVEPEWYIPIIPTVLVNGAEGIGTGWSCKIPNYD 811

Query: 876  PRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIK 935
             R+IV+N+ RLL+G    PM P Y+ F G I++    +    Y + G +  ++ TT+ I 
Sbjct: 812  TREIVSNIGRLLDGLEPLPMLPSYKNFKGLIQELGPNQ----YILNGEVSVLDNTTIEIS 867

Query: 936  ELPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEG 991
            ELP+R WTQ+Y+E  LE ++   ++    I  +++Y  DTTV F V L+E+ +M  +  G
Sbjct: 868  ELPVRTWTQNYKEQVLEPMLNGTEKTPPLITDYKEYHTDTTVKFVVKLTEQKLMEAEAAG 927

Query: 992  LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
            L K FKL T ++ ++M LFD  G ++KY+T   IL EFF +RL++Y  RK   +  L  E
Sbjct: 928  LHKVFKLQTPLTCNSMVLFDHVGCLRKYETATDILREFFVLRLKYYSLRKDWLVGMLTAE 987

Query: 1052 LLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETE 1111
              +L N+ RFIL  + G+IV+ N+ + +L+  L Q+G+   P   KS +           
Sbjct: 988  ASRLSNQARFILEKIEGKIVIENKPKKELIQMLVQRGYDSDP--VKSWKQTQEKEEAGEL 1045

Query: 1112 ESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWV 1171
              EE    VN     D++YLL M +  L+ EK   L   RD  N E+ DL+K +P  LW 
Sbjct: 1046 LEEEEETEVN-TAGPDFNYLLGMPLWNLSKEKKDELCKQRDVKNAELQDLKKKSPSDLWK 1104

Query: 1172 KDLDALDMQLDELDKSDARAEEERMKIKGN-GNGDAGPKIVAK------RAPKNARKNDK 1224
            +DL A    ++ELD+ +A+  EE+    G    G +G   V K          + R+   
Sbjct: 1105 EDLSAF---VEELDRVEAKEREEQSVTTGKVVKGKSGRPQVKKMQLQEIMPSPHGRRVVP 1161

Query: 1225 KSNNARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEV--PDLKQRLAKLNEQ 1282
            K   A   EA  +M       + KG    KK   E  DD E D +  P+       L E+
Sbjct: 1162 KVTTAMKAEATKKMKK-----RIKGEDVAKKMDFE--DDGEGDSLNSPEQSPESLTLAER 1214

Query: 1283 LASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRTA 1317
            L S K++  P    V + ++  +P K   P K+ A
Sbjct: 1215 L-SKKVKKEPGAKAVKDKKQATLPFK---PVKKEA 1245


>gi|300176630|emb|CBK24295.2| unnamed protein product [Blastocystis hominis]
          Length = 1173

 Score =  988 bits (2555), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 530/1189 (44%), Positives = 747/1189 (62%), Gaps = 102/1189 (8%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T  ++ I ++YQK SQ +HIL RPDTYIGS++  TQ +W+++E SK+M +R+++Y PGL 
Sbjct: 11   TEESEKIGDVYQKLSQRDHILKRPDTYIGSVQNITQKMWLFDETSKSMQYRSVNYNPGLI 70

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KIFDEILVNA DNKQR P+M  +KV +D++ + IS++N GDG+PV IH E  VY+P +IF
Sbjct: 71   KIFDEILVNAVDNKQRCPEMTTIKVSVDKKTNTISIYNDGDGIPVAIHPEYNVYIPSMIF 130

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            G LL+ +N+DDN KK TGGRNG+GAKLTNI+STEF +ET   +  K++ QVF NNM ++ 
Sbjct: 131  GQLLSGTNFDDNSKKVTGGRNGFGAKLTNIYSTEFRVETVSNE--KRFIQVFRNNMTEEE 188

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
            +P ++K      +T++ FKPDLA+F M  L+DD +A+MK+RV D+AG    SVKV  NG 
Sbjct: 189  KPKVTKATRSKQYTEIVFKPDLARFGMKELDDDTIAIMKRRVYDVAGVTDDSVKVYWNGE 248

Query: 261  RVPVKSFAEYVDMYPKSV--TRFHERVNE---------------RWEICVT--------- 294
            ++ V+SF +YV ++ +++  T F E+ N+               RW+  V          
Sbjct: 249  KLNVRSFNDYVKLFERTLQNTDFVEQNNDALQHIDIQMAYGASPRWQFAVIPTPITGITP 308

Query: 295  LSEGQF-----QQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKN 349
             S G +      ++SFVNG+ T +GG H+ Y+ + +   +   + ++ K + VK   ++ 
Sbjct: 309  FSVGSYFFSLNGKMSFVNGVFTNRGGKHLTYLTDHIVAQLQPAIERRLKRS-VKPSLIRQ 367

Query: 350  HLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANF 409
            HL VF N LI+NP FDSQTKE LT     FGS  ELS  FL K+  +SGIV+ + +  + 
Sbjct: 368  HLCVFCNCLIENPTFDSQTKECLTTNSKDFGSLPELSPSFLSKI-ERSGIVDLVSTSMHL 426

Query: 410  KQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGR 469
            K  + LKK+ GTK   +  I KL+DAN AG + S Q TLI+TEGDSAKALA+ GL VVGR
Sbjct: 427  KDIQTLKKSSGTKVNRLLNIPKLDDANNAGTKKSGQATLIITEGDSAKALAVGGLGVVGR 486

Query: 470  DRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTD 529
            D +GVFPL+GK++NVR+A+  Q   N EI N+ +ILGLK G EY +  SLRYGHL+IMTD
Sbjct: 487  DNYGVFPLKGKVMNVRDATEKQCSENEEIQNLVRILGLKYGKEYKDTSSLRYGHLLIMTD 546

Query: 530  QVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVE 589
            Q                            D+DGSHIKGL++N   +FWPSLLK+  F+ +
Sbjct: 547  Q----------------------------DYDGSHIKGLVLNLFETFWPSLLKL-DFVSQ 577

Query: 590  FITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
            FITPIVK T K  +  +F+++ +++ W      +  SW IKYYKGLGTST+KEGKEYF N
Sbjct: 578  FITPIVKVTRKKEE-HTFFTVKEFQDWSNK-EKDLKSWKIKYYKGLGTSTAKEGKEYFSN 635

Query: 650  ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKE 709
            +  H   F      +   I++ F + + E RK+W+  F+P +++D ++  +   DF+NKE
Sbjct: 636  LDRHVLPFAPLTSSESNLIDMCFKRSRCEERKEWIDGFDPESYIDYEKSPVSIYDFINKE 695

Query: 710  LILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQ 769
            LI FS  D  RSIPSM+DGLKP QRK+L    +RN  KE KV Q SGY+SE   YHHGEQ
Sbjct: 696  LIQFSRQDCIRSIPSMIDGLKPSQRKVLHGCIQRNLTKEIKVVQLSGYISESVLYHHGEQ 755

Query: 770  SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
            SL  TI+ MAQDFVGSNN+N L PNGQFGTR  GGKD+AS RYI+T L PIT+ +F ++D
Sbjct: 756  SLNQTIISMAQDFVGSNNMNFLVPNGQFGTRLMGGKDSASPRYIYTYLHPITKHVFREED 815

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIV-ANVRRLLN 888
              LL    E+G  IEP++Y+PI+PTVLVNG+ GIGTGWS+ + N+NP ++  A + +L  
Sbjct: 816  SALLPSQEEEGVHIEPSYYLPILPTVLVNGAVGIGTGWSTNVCNHNPIEVADALIAQLRG 875

Query: 889  GEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE 948
                 P++PWYRGF G I K   KE G  Y V G +  ++E TL I ELP+ RWTQDY++
Sbjct: 876  TRSNRPLYPWYRGFVGQILK---KENG--YQVCGNVSWIDENTLAITELPVGRWTQDYKQ 930

Query: 949  FLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEE--SMMRTKQEGLLKKFKLTTTISTSN 1006
            FL  +++Q D  + GFR+   DT V F V + +E  + ++  +E L+K  +L  +++TSN
Sbjct: 931  FLCDLVEQGD-VVTGFRENHTDTEVMFTVTVKKEKAAELKENREKLMKDLRLIGSLTTSN 989

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
              LF+SKG I  Y    +I+EEF   RL FY++R++  ++ L+ +   LENK  FI  VV
Sbjct: 990  FILFNSKGHIHHYKDANEIMEEFIEFRLPFYQQRRENLMKQLDKKCKLLENKSNFIQHVV 1049

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI 1126
            +G +V+++R    ++ ++   G                G+  ET                
Sbjct: 1050 DGSLVLHDRPIKKVISDMEALGLMKI------------GSDGETST-------------- 1083

Query: 1127 DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
             YDYLL++ +  LT EK + L  +  +  E+ + L     + LW++DL+
Sbjct: 1084 -YDYLLNLPLNGLTEEKRKQLDTEMKETKEKKEVLNSKESKDLWIEDLE 1131


>gi|448931515|gb|AGE55077.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus MA-1D]
          Length = 1062

 Score =  988 bits (2553), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 545/1153 (47%), Positives = 720/1153 (62%), Gaps = 107/1153 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQ +H+L RPDTYIGS    T+  W+Y   +  +I + ++Y   L KIFDEI+ N+
Sbjct: 5    YQKLSQRDHVLARPDTYIGSTAPQTKNEWVYV--NGKVIKKDVTYSSALLKIFDEIITNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   RD ++  +K+ ID+    +SVHN G  +P+E H  E  Y+PELIFGHLL   N+D
Sbjct: 63   ADCYNRDKRLTILKICIDETS--VSVHNDGCSIPIEKHDVEKCYIPELIFGHLLAGENFD 120

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNG G+K TNIFS  F +E  DG   KKYKQ + +NM   S+P ++ C + 
Sbjct: 121  DTEQRTGAGRNGIGSKATNIFSRIFDVEICDGN--KKYKQTWRDNMSIVSKPKVTTCSK- 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            + +   +F PD  +F +   +DD++++M++RV D+A  LGK VKV LNG R+ +K+  +Y
Sbjct: 178  NPYITTTFFPDFVRFGVETFDDDILSVMRRRVYDMAAVLGK-VKVMLNGKRLEIKNTEDY 236

Query: 271  VDMYPKSVT---RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVAN 327
              +Y  S T   R  E   E W++ V   E  F  VSFVN + T +GGTHV+ V + ++ 
Sbjct: 237  FSLYIGSKTETKRAFEHTPEEWDVGVACVE-DFTPVSFVNSVVT-RGGTHVNAVTDAISK 294

Query: 328  HVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE 387
             V+    KK     V+   VKN ++VFVNA I NP FDSQTKE LT R +    +  LSE
Sbjct: 295  AVVEAAAKKK--ITVRPLTVKNRMFVFVNATIVNPTFDSQTKEILTSRNA----RVTLSE 348

Query: 388  EFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
             F+KK  A   +++ ++   N + S    K+LKK DG K   V GI KL DA  AG  NS
Sbjct: 349  AFMKK--AVGVLLDAVIQETNVRTSLVDQKELKKTDGAKKIRVTGIPKLNDATWAGTNNS 406

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSA  LA+AGLSVVGR+R+GVFPLRGKLLNVR+AS   +  N EI  +K+
Sbjct: 407  KMCTLILTEGDSAATLAIAGLSVVGRERYGVFPLRGKLLNVRDASVASITKNEEITALKQ 466

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+ G  Y +  SLRYGH+MIMTD                             D DG+
Sbjct: 467  ILGLQTGKVYKDTSSLRYGHVMIMTDA----------------------------DVDGT 498

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSMPDYEAWKESLGG 622
            HI GL++NF HS +PSLL+IP FL +FITPIV A  K GK V  FYS+PDYE W ++   
Sbjct: 499  HISGLVMNFFHSCFPSLLEIPGFLKKFITPIVVA--KKGKDVREFYSLPDYEDWVKTTK- 555

Query: 623  NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
            + S + IKYYKGLGTS+S + K YF N+    K F+W  D  GE I+ +F+K + E RK+
Sbjct: 556  DYSKYQIKYYKGLGTSSSTDAKHYFSNLKSLMKTFMWTSDS-GELIDRSFNKSRAEDRKE 614

Query: 683  WLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
            W+  +EPGN LD K+  +   DF++KELILFS  DL+RSIPS+VDG KP QRK+L+C+FK
Sbjct: 615  WMTAYEPGNQLDHKKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYCAFK 674

Query: 743  RNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQ 802
            RN   + KVAQFSGYV+EHSAYHHGE SL  TI+ +AQD+VGSNNIN L P GQFG+R Q
Sbjct: 675  RNLTTDVKVAQFSGYVAEHSAYHHGEASLQGTIVNLAQDYVGSNNINWLLPEGQFGSRLQ 734

Query: 803  GGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEG 862
            GGKD ASARYIFT+L+P TR +F   DD LL YL +DG +IEP +Y+P+IP++LVNGS G
Sbjct: 735  GGKDHASARYIFTKLNPKTRQVFVDTDDNLLKYLYDDGDKIEPEYYVPVIPSILVNGSSG 794

Query: 863  IGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTG 922
            IGTGWS+ IP+YNP+DIV NV+RL+ GE +  M PW+RGF G IE+T+    GV Y   G
Sbjct: 795  IGTGWSTNIPSYNPKDIVDNVKRLIAGEDLVEMKPWFRGFKGKIEETS---PGV-YVTKG 850

Query: 923  IIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV-FLSE 981
            +    N  T+ + ELPI +WTQDY+E L+ ++++    I  FR+   DT V FE+ F+  
Sbjct: 851  LYMP-NGKTITVSELPIGKWTQDYKEHLDGLLEK--KIISDFREKHTDTDVLFEIDFVGN 907

Query: 982  ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
             +         +   KL TTI  +NMH FD  G IKKYDTP  I+ E+F +R + Y KRK
Sbjct: 908  PN---------IDILKLETTIRATNMHAFDPYGKIKKYDTPLDIIREWFGVRKDLYVKRK 958

Query: 1042 KVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA 1101
               LE+L       +NK RFI  V +GEI++N R  +D+  EL +  F            
Sbjct: 959  AYLLEDLTHRTNIAQNKYRFITMVNDGEIIINKRNESDISAELEKLNFYK---------- 1008

Query: 1102 VVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
                              V+G     YDYLL+M I +LTLE+ + L  +  KL +E+DDL
Sbjct: 1009 ------------------VDG----KYDYLLNMRISSLTLERAEELKRESVKLEKELDDL 1046

Query: 1162 RKATPESLWVKDL 1174
             K T   +W  DL
Sbjct: 1047 SKTTETEMWNNDL 1059


>gi|66814704|ref|XP_641531.1| DNA topoisomerase II [Dictyostelium discoideum AX4]
 gi|166210410|sp|P90520.2|TOP2M_DICDI RecName: Full=DNA topoisomerase 2, mitochondrial; Short=DNA
            topoisomerase II; Flags: Precursor
 gi|60469558|gb|EAL67548.1| DNA topoisomerase II [Dictyostelium discoideum AX4]
          Length = 1284

 Score =  985 bits (2546), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 541/1231 (43%), Positives = 766/1231 (62%), Gaps = 140/1231 (11%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWI-----YEEESKTM----------- 68
            + IE++YQKK+  EH+LLRPD+YIG+IEK    +W+     + +E KT+           
Sbjct: 85   RKIEDIYQKKTPTEHVLLRPDSYIGTIEKIEDDMWVLSNSMFNKEKKTIELNNDNNEKNV 144

Query: 69   -----------------IHRT-ISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQE 110
                             IH    +Y+PGL KI+DEILVNAADNK+RD KM  +KV I+  
Sbjct: 145  ESTTTTTTKTNKKPLTYIHPIKATYIPGLLKIYDEILVNAADNKKRDSKMSFIKVEINPN 204

Query: 111  HDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNI 170
             + IS+ N G G+PV +HQ E  YV E++ G+L++ SN++D+  K  GGRNG+GAKLTNI
Sbjct: 205  ENSISIMNDGKGIPVVMHQTENCYVVEMVMGNLMSGSNFNDSELKVVGGRNGFGAKLTNI 264

Query: 171  FSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD-NWTKVSFKPDLAKFNMTH 229
            FS EF +ET D    KKY Q ++NNMG +SEP I+   EG+ ++TK++FKPDL KF +  
Sbjct: 265  FSKEFTVETVDKSSGKKYFQRWSNNMGDRSEPIITPIGEGESDYTKITFKPDLEKFKIKS 324

Query: 230  LEDD-VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHER---- 284
            L DD ++ LM++R+ D+AGC    + V LNG R+   +F  YV +Y   +    +R    
Sbjct: 325  LWDDNILQLMERRLYDIAGC-NTELMVTLNGKRLNY-NFQSYVKLYEHHLNNSTKREDNE 382

Query: 285  ------------VNERWEICVTLSE-GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
                        ++ RW+I + LSE GQF QVSFVN I T+KGGTHV+++A+Q+  +V  
Sbjct: 383  EQYREESFEFGEISPRWKIGIGLSETGQFTQVSFVNSINTVKGGTHVNFLADQIVRYVGE 442

Query: 332  VVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLK 391
             + KK+ +  ++  N+K+HL +FVN L+DNP+FDSQ+KETLT +   FGS  E+ E  L 
Sbjct: 443  KLKKKHSDLEIRPMNIKHHLALFVNCLVDNPSFDSQSKETLTTKPMLFGSTPEIPESLLA 502

Query: 392  KVTAKSGIVETLLSWANFKQSKDLKKNDG---TKTEDVRGISKLEDANLAGGRNSEQCTL 448
            +    S I+E +  WA  KQ  DL  +     +KT  ++ ISKL+DAN AGG  S++CTL
Sbjct: 503  QFVKNSKIIERVAGWALMKQKADLIHSTSGRQSKTTLIKSISKLDDANWAGGLKSKECTL 562

Query: 449  ILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK 508
            I+TEGDSAK+LA+AGLSVVGR+ +GVFPLRGKLLNVR+ +S Q+L+N EI N+  ILGL 
Sbjct: 563  IITEGDSAKSLALAGLSVVGRNSYGVFPLRGKLLNVRDVASKQLLSNEEINNLTTILGLS 622

Query: 509  QGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
                Y+   +++ LRYG +MIM DQ                            DHDGSHI
Sbjct: 623  HKNSYDTDESMEDLRYGRVMIMADQ----------------------------DHDGSHI 654

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNA- 624
            KGL++NFIH FWP+LLK   FLVEF+TPI+KAT  + +  SF+++ DYE W+E++  +  
Sbjct: 655  KGLVMNFIHYFWPNLLK-RGFLVEFVTPIIKATKSSTQKKSFFTIKDYEKWRETISSDQL 713

Query: 625  SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
              ++IKYYKGLGTSTS E KEYF N+  H   F+W D+ D + I++AF+K     R++W+
Sbjct: 714  KQYTIKYYKGLGTSTSAEAKEYFSNLDKHVIKFIWGDEAD-DLIKMAFAKDLSSLRQRWI 772

Query: 685  LQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRN 744
             + +    +D   K I Y DF+NKELI +S A   RSIPS++DGLKPGQRKILF SFKR 
Sbjct: 773  KETDMSQGIDHSIKEITYPDFINKELIHYSWAANLRSIPSLIDGLKPGQRKILFASFKRR 832

Query: 745  FIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGG 804
               E KV+Q SGYV+E ++YHHGEQSL STI+ MA +FVGSNN+ LL P+GQFGTR QGG
Sbjct: 833  LTNEIKVSQLSGYVAEQTSYHHGEQSLNSTIVKMAHNFVGSNNLPLLTPSGQFGTRLQGG 892

Query: 805  KDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIG 864
             D+ASARYIFT+L P+ R+LF + DD LL+YL E+G+ I+P +Y+PIIP +LVNGSEGIG
Sbjct: 893  SDSASARYIFTKLEPVARYLFNELDDPLLNYLEEEGESIQPDYYIPIIPMLLVNGSEGIG 952

Query: 865  TGWSSYIPNYNPRDIVANVRRLLNGEM-MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGI 923
             G S+ IP ++P DI+  +   LN ++ ++ + PWYRGF GTI          TY   G+
Sbjct: 953  VGMSTSIPLFSPIDIIDQLMLRLNNQVALKKLIPWYRGFKGTISPDRH-----TYRTNGV 1007

Query: 924  IEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSE-- 981
            I+ V    L I ELPI RWT DY+E L  +ID++   I+ F++ + + +V F + L+   
Sbjct: 1008 IKLVGR-NLEITELPIGRWTSDYKEVLNDLIDKD--VIKSFQESNTENSVHFTILLNNNQ 1064

Query: 982  -ESMMRTKQEGLLKKFKLTTTISTSNMHL--FDSKGVIKKYDTPEQILEEFFHIRLEFYE 1038
             E M    +  L+K FKL+ ++   N HL  FD    I+K ++ E+I+++F+ +RL+FY 
Sbjct: 1065 LEQMEDLTENELIKLFKLSASL---NFHLTCFDENSKIQKLESVEEIIDQFYKVRLQFYG 1121

Query: 1039 KRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK---GFTPFPKN 1095
            KR++  L++L+ ++ +L   ++F+  + +G++ +  R + DL+ EL      GF  F  +
Sbjct: 1122 KRREYLLKSLDNQIKRLTTTIQFLEVIASGKLKIQGRSKQDLIKELESGEIVGFENFGTH 1181

Query: 1096 SKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLN 1155
                                 PEV        Y +L S++I  +T E++  L     K  
Sbjct: 1182 P--------------------PEV--------YQHLFSLSILDITKERIDNLTNQLTKRK 1213

Query: 1156 EEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
             E   +  + P+SLW  DL  L   L++ DK
Sbjct: 1214 SEHQSISSSDPKSLWTADLQQLKEYLEKSDK 1244


>gi|448929090|gb|AGE52659.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CvsA1]
          Length = 1064

 Score =  984 bits (2545), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/1157 (47%), Positives = 728/1157 (62%), Gaps = 107/1157 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQ EH+L RPDTYIGS+   T+  W+Y +    +I + ++Y P L KIFDEI+ N+
Sbjct: 4    YQKLSQREHVLARPDTYIGSVAPQTKNEWVYVDGK--IIRKDVTYPPALLKIFDEIITNS 61

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   RD K+  +KV ID++   +SVHN G  +P+E H  E  Y+PELIFGHLL   N+D
Sbjct: 62   ADCYNRDKKLTVLKVCIDEKS--VSVHNDGCNIPIEKHDAEKCYIPELIFGHLLAGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ ++T  GRNG G+K TNIFS +F +E  DGK  KKYKQ + NNM   S+P ++ C + 
Sbjct: 120  DSEQRTGAGRNGIGSKATNIFSKKFDVEICDGK--KKYKQSWENNMSVMSKPKVTTCSK- 176

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++   +F PD  +F +   +DD +++M +RV D+A  L K VKV LNG R+ +K+  +Y
Sbjct: 177  DSYITTTFFPDFERFGIDSFDDDTMSIMVRRVYDMAAVLNK-VKVMLNGKRLEIKNTEDY 235

Query: 271  VDMYPKSVT---RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVAN 327
              +Y  + T   R  E   E W++ V+ S+ +F  VSFVN + T +GGTHV+ V + VA 
Sbjct: 236  FSLYVGNKTETKRAFEHTPENWDVAVSCSD-EFTPVSFVNSVVT-RGGTHVNAVTDAVAK 293

Query: 328  HVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE 387
             V+       K   VK   VK  ++VFVNA + NP FDSQTKE LT R +    +  LS+
Sbjct: 294  AVVE--AAAKKKIVVKPATVKGRMFVFVNATVFNPTFDSQTKENLTSRNA----RVTLSD 347

Query: 388  EFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
             F+KK  A   +++ ++   N + S    K+LKK DG K   V GI KL DA  AG +NS
Sbjct: 348  TFVKK--AVGVLLDAVIQETNVRTSLVDQKELKKTDGAKKSRVSGIPKLNDAAWAGTKNS 405

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSA  LA+AGLSVVGR+R+GVFPLRGKLLNVR+AS   +  N EI  +K+
Sbjct: 406  KMCTLILTEGDSAATLAIAGLSVVGRERYGVFPLRGKLLNVRDASVASITKNEEITALKQ 465

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+ G  Y +  SLRYGH+MIMTD                             D DG+
Sbjct: 466  ILGLQTGKVYKDTSSLRYGHVMIMTDA----------------------------DVDGT 497

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSMPDYEAWKESLGG 622
            HI GL++NF HS +PSLL+IP FL +FITPIV A  K GK V  FYS+PDYE W ++   
Sbjct: 498  HISGLVMNFFHSCFPSLLEIPGFLKKFITPIVVA--KRGKDVREFYSLPDYEDWVKTTK- 554

Query: 623  NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
            + S + IKYYKGLGTS+S + K YF N+    K F W  D  GE I+ +F+K + E RK+
Sbjct: 555  DYSKYQIKYYKGLGTSSSTDAKHYFSNLKSLMKTFTWTSDS-GELIDRSFNKTRAEDRKE 613

Query: 683  WLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
            W+  +EPGN LD K+  +   DF++KELILFS  DL+RSIPS+VDG KP QRK+L+ +FK
Sbjct: 614  WMTAYEPGNQLDHKKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYSAFK 673

Query: 743  RNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQ 802
            RN   + KVAQFSGYV+EHSAYHHGE SL  TI+ +AQD+VGSNNIN L P GQFG+R Q
Sbjct: 674  RNLTTDVKVAQFSGYVAEHSAYHHGEVSLQGTIVNLAQDYVGSNNINWLLPEGQFGSRLQ 733

Query: 803  GGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEG 862
            GGKD ASARYIFT+L+P TR +F   DD LL YL +DG +IEP +Y+PIIP++LVNGS G
Sbjct: 734  GGKDHASARYIFTKLNPKTRQVFVDTDDNLLKYLYDDGDKIEPEYYVPIIPSILVNGSSG 793

Query: 863  IGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTG 922
            IGTGWS+ IP+YNP+DIV NV+RL++GE +  M PWYRGF G IE+T+    GV Y   G
Sbjct: 794  IGTGWSTNIPSYNPKDIVDNVKRLISGEDLVEMKPWYRGFKGKIEETS---PGV-YVTKG 849

Query: 923  IIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV-FLSE 981
            +     +T + + ELP+ +WTQDY+E+L+ ++++    I  FR+   DT V FE+ F+  
Sbjct: 850  LYMPKGKTIM-VSELPVGKWTQDYKEYLDGLLEKK--VISDFREKHSDTDVLFEIDFVGN 906

Query: 982  ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
             +         +   KL TTI ++NMH FD  G IKKYDTP  I+ ++F +R   Y KRK
Sbjct: 907  PN---------IDILKLETTIRSTNMHAFDPSGKIKKYDTPLDIIRDWFEVRRNLYVKRK 957

Query: 1042 KVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA 1101
               LE+L       +NK RFI  V N EI++N +  + +  EL +  F            
Sbjct: 958  AYLLEDLTHRTNIAQNKHRFITMVNNDEIIINKKHESVISAELEKLNFYK---------- 1007

Query: 1102 VVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
                              V+G     YDYLL+M I +LTLE+   L  +  KLN+E+DDL
Sbjct: 1008 ------------------VDG----KYDYLLNMRISSLTLERATELEREAVKLNKELDDL 1045

Query: 1162 RKATPESLWVKDLDALD 1178
             K T   +W +DL +LD
Sbjct: 1046 SKTTETDMWKQDLTSLD 1062


>gi|448928070|gb|AGE51642.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CviKI]
          Length = 1064

 Score =  984 bits (2543), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 549/1157 (47%), Positives = 728/1157 (62%), Gaps = 107/1157 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQ EH+L RPDTYIGS+   T+  W+Y +    +I + ++Y P L KIFDEI+ N+
Sbjct: 4    YQKLSQREHVLARPDTYIGSVAPQTKNEWVYVDGK--IIRKDVTYPPALLKIFDEIITNS 61

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   RD K+  +KV ID++   +SVHN G  +P+E H  E  Y+PELIFGHLL   N+D
Sbjct: 62   ADCYNRDKKLTVLKVCIDEKS--VSVHNDGCNIPIEKHDVEKCYIPELIFGHLLAGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ ++T  GRNG G+K TNIFS +F IE  DGK  KKYKQ + NNM   S+P ++ C + 
Sbjct: 120  DSEQRTGAGRNGIGSKATNIFSKKFDIEICDGK--KKYKQSWENNMSVMSKPKVTTCSK- 176

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++   +F PD  +F +   +DD +++M +RV D+A  L K VKV LNG R+ +K+  +Y
Sbjct: 177  DSYITTTFFPDFERFGIESFDDDTMSIMVRRVYDMAAVLNK-VKVMLNGKRLEIKNTEDY 235

Query: 271  VDMYPKSVT---RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVAN 327
              +Y  + T   R  E   E W++ V+ S+ +F  VSFVN + T +GGTHV+ V + VA 
Sbjct: 236  FSLYVGNKTETKRAFEHTPENWDVAVSCSD-EFTPVSFVNSVVT-RGGTHVNAVTDAVAK 293

Query: 328  HVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE 387
             V+       K   VK   VK  ++VFVNA + NP FDSQTKE LT R +    +  LS+
Sbjct: 294  AVVE--AAAKKKIVVKPATVKGRMFVFVNATVVNPTFDSQTKEILTSRNA----RVTLSD 347

Query: 388  EFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
             F+KKV     +++ ++   N + S    K+LKK DG K   V GI KL DA  AG +NS
Sbjct: 348  TFVKKVVGV--LLDAVIQETNVRTSLVDQKELKKTDGAKKSRVSGIPKLNDAAWAGTKNS 405

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSA  LA+AGLSVVGR+R+GVFPLRGKLLNVR+AS   +  N EI  +K+
Sbjct: 406  KMCTLILTEGDSAATLAIAGLSVVGRERYGVFPLRGKLLNVRDASVASITKNEEITALKQ 465

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+ G  Y +  SLRYGH+MIMTD                             D DG+
Sbjct: 466  ILGLQTGKVYKDTSSLRYGHVMIMTDA----------------------------DVDGT 497

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSMPDYEAWKESLGG 622
            HI GL++NF HS +PSLL+IP FL +FITPIV A  K GK V  FYS+PDYE W ++   
Sbjct: 498  HISGLVMNFFHSCFPSLLEIPGFLKKFITPIVVA--KRGKDVREFYSLPDYEDWVKTTK- 554

Query: 623  NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
            + S + IKYYKGLGTS+S + K YF N+    K F W  D  GE I+ +F+K + E RK+
Sbjct: 555  DYSKYQIKYYKGLGTSSSTDAKHYFSNLKSLMKTFTWTSDS-GELIDRSFNKSRAEDRKE 613

Query: 683  WLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
            W+  +EPG+ LD K+  +   DF++KELILFS  DL+RSIPS+VDG KP QRK+L+ +FK
Sbjct: 614  WMTAYEPGDQLDHKKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYSAFK 673

Query: 743  RNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQ 802
            RN   + KVAQFSGYV+EHSAYHHGE SL  TI+ +AQD+VGSNNIN L P GQFG+R Q
Sbjct: 674  RNLTTDVKVAQFSGYVAEHSAYHHGEVSLQGTIVNLAQDYVGSNNINWLLPEGQFGSRLQ 733

Query: 803  GGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEG 862
            GGKD ASARYIFT+L+P TR +F   DD LL YL +DG +IEP +Y+PIIP++LVNGS G
Sbjct: 734  GGKDHASARYIFTKLNPKTRQVFVDTDDNLLKYLYDDGDKIEPEYYVPIIPSILVNGSSG 793

Query: 863  IGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTG 922
            IGTGWS+ IP+YNP+DIV NV+RL++GE +  M PWYRGF G IE+T+    GV Y   G
Sbjct: 794  IGTGWSTNIPSYNPKDIVDNVKRLISGEDLVEMKPWYRGFKGKIEETS---PGV-YVTKG 849

Query: 923  IIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV-FLSE 981
            +     +T + + ELP+ +WTQDY+E+L+ ++++    I  FR+   DT V FE+ F+  
Sbjct: 850  LYMPKGKTIV-VSELPVGKWTQDYKEYLDGLLEKK--VISDFREKHSDTDVLFEIDFVGN 906

Query: 982  ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
             +         +   KL TTI ++NMH FD  G IKKYDTP  I+ ++F +R   Y KRK
Sbjct: 907  PN---------IDILKLETTIRSTNMHAFDPSGKIKKYDTPLDIIRDWFEVRRNLYVKRK 957

Query: 1042 KVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA 1101
               LE+L       +NK RFI  V N EIV+N +  + +  EL +  F            
Sbjct: 958  AYLLEDLTHRTNIAQNKHRFITMVNNDEIVINKKHESVISAELEKLNFYK---------- 1007

Query: 1102 VVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
                              V+G     YDYLL+M I +LTLE+   L  +  KLN+E+DDL
Sbjct: 1008 ------------------VDG----KYDYLLNMRISSLTLERATELEREAVKLNKELDDL 1045

Query: 1162 RKATPESLWVKDLDALD 1178
             K T   +W +DL +LD
Sbjct: 1046 SKTTETDMWKQDLTSLD 1062


>gi|125583360|gb|EAZ24291.1| hypothetical protein OsJ_08043 [Oryza sativa Japonica Group]
          Length = 1487

 Score =  983 bits (2542), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 554/964 (57%), Positives = 663/964 (68%), Gaps = 89/964 (9%)

Query: 596  KATNKNGK--VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLH 653
            +ATNK  K  VL FYSMP+YE WKESLGGNAS WSIKYYKGLGTSTS EG++YFQ+I  H
Sbjct: 538  QATNKRDKKIVLPFYSMPEYEQWKESLGGNASGWSIKYYKGLGTSTSSEGRQYFQDIAKH 597

Query: 654  KKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILF 713
            KKDFVW++DQD   IELAFSKK+I  RK+WL  F+ G HLD + KYIKYSDF+NKELI F
Sbjct: 598  KKDFVWKNDQDDNDIELAFSKKRITDRKEWLTNFQSGTHLDTEGKYIKYSDFINKELIQF 657

Query: 714  SMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAS 773
            SMADL RSIPSMVDGLKPGQRKILFCSFKRN +KE KVAQFSGYVSEHSAYHHGEQSLAS
Sbjct: 658  SMADLLRSIPSMVDGLKPGQRKILFCSFKRNLVKEIKVAQFSGYVSEHSAYHHGEQSLAS 717

Query: 774  TILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLL 833
            TI GMAQDFVGSNNINLLQPNGQFGTR+QGGKDAASARYIFT LSPITR +FPKDDD LL
Sbjct: 718  TITGMAQDFVGSNNINLLQPNGQFGTRDQGGKDAASARYIFTLLSPITRSIFPKDDDILL 777

Query: 834  DYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMME 893
            +YL+EDGQ IEPTWY+PI+P VLVNGSEGIGTGWS++IPNYNPRDIVAN+RRLLN E +E
Sbjct: 778  NYLDEDGQSIEPTWYVPILPMVLVNGSEGIGTGWSTFIPNYNPRDIVANLRRLLNDEPVE 837

Query: 894  PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI 953
            PM PWYRGF G+I+KT +K  GV+YTVTGIIE V++TTLRI ELPIRRW+QDY+EFL SI
Sbjct: 838  PMDPWYRGFKGSIQKTGTKAGGVSYTVTGIIEVVDDTTLRITELPIRRWSQDYKEFLISI 897

Query: 954  --------------------------IDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRT 987
                                          + FI  F  YSDD  V+F + LS+E+M   
Sbjct: 898  GGTDKSKDKDKDKGKGKGKVKEKEKKEKDIEPFIEAFDTYSDDKNVEFLITLSKENMAIA 957

Query: 988  KQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLEN 1047
             QEGL KKFKLTTTI T+NMHLFDS G I+KYDTPE IL+EFF +RLEFYEKRK+V LEN
Sbjct: 958  LQEGLEKKFKLTTTIGTTNMHLFDSNGKIRKYDTPEDILKEFFGLRLEFYEKRKRVLLEN 1017

Query: 1048 LELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGAT 1107
            +ELEL KL NKVRFIL VV G+I+VNNRKR +L +EL+QKGF PFP+  +       GA 
Sbjct: 1018 IELELKKLSNKVRFILAVVEGDIIVNNRKRAELFVELKQKGFDPFPRKKQRAGPSAVGAI 1077

Query: 1108 DETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPE 1167
            +E EE+EE+PE  N V S DY+YLLSMAIGTLTLE+VQ L+A++ ++  EV +L++  P+
Sbjct: 1078 EEDEENEESPEAAN-VGSSDYEYLLSMAIGTLTLERVQQLIAEKGRMENEVAELKRTRPK 1136

Query: 1168 SLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSN 1227
            SLW++DLDA + +LD LD+ D+   EER   +  G G A  K   KR P+    N + + 
Sbjct: 1137 SLWMRDLDAFEKELDALDEKDSMDAEERRATRNAGGGAAPNKAAPKRRPRKTATNTQAAE 1196

Query: 1228 NARATEAMGEMDNVTKVV-KPKGRAGL------------------KKAPAEK----LDDD 1264
            ++    A   +        KP G+A L                  KK PA+K    L DD
Sbjct: 1197 SSDGNAAAPAVPKPAAPRKKPAGKASLADSEDEDYIAAIPKPAAQKKQPAKKASTQLSDD 1256

Query: 1265 EEDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKK--KEPSKRTAAQKKV 1322
            E+DEV  LK RLA  N        + S D +   ET + Q   KK  KEPSKR AA+K +
Sbjct: 1257 EDDEVLALKDRLAAYNLD------DHSEDTAMETETTEEQAKGKKGRKEPSKRGAAKKAI 1310

Query: 1323 --VTVETSDSEDEII-IDDDEAFEIAAPEEGKKGGRKAAGNSKAA-KPAAETKKRGPAKK 1378
              + V + D EDE + ID+D+  + A  E   K GR   G   AA KP A T+KR PA+ 
Sbjct: 1311 SSLAVISDDEEDETVPIDEDDEDDFAMEEVPVKKGR---GKKPAAEKPKAATRKRAPAQG 1367

Query: 1379 QQPEASLGQRLLTEMLKPAES------SPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSG 1432
            +    S+ Q+++ EM KP E       SPEKKVRKMRASPF+KKSGS+L RA T    + 
Sbjct: 1368 K----SMRQKVMEEMFKPTEDSSTSAPSPEKKVRKMRASPFHKKSGSVLQRASTASTSTE 1423

Query: 1433 SSPSTSEEVAEVLPPKARPQRANR-----RQARYVLSDSESE----KATDDSEF---DED 1480
             + S+S   +   P  ARP+R  R      Q    LSD ++E      +DDS+F   D  
Sbjct: 1424 ETESSSPSGSSAEPVAARPKRQTRGNKKSYQEVQELSDDDTEDEVQDISDDSDFAGSDFG 1483

Query: 1481 EDED 1484
            ED+D
Sbjct: 1484 EDDD 1487



 Score =  827 bits (2137), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/536 (72%), Positives = 459/536 (85%), Gaps = 13/536 (2%)

Query: 6   RLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES 65
           RLPL +S+  N        KTIEEMYQKK+QLEHILLRPDTYIGS+EKHT  LW+YE+ +
Sbjct: 7   RLPLQSSSGHNAAAGGGGGKTIEEMYQKKTQLEHILLRPDTYIGSVEKHTAQLWVYEDGA 66

Query: 66  KTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPV 125
             M+ R+++YVPGLYKIFDEILVNAADNKQRDP MD+++V ID +   ISV+N+GDG+PV
Sbjct: 67  --MVSRSVTYVPGLYKIFDEILVNAADNKQRDPSMDSLRVEIDADEGRISVYNNGDGIPV 124

Query: 126 EIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRL 185
           EIHQEEGVYVPE+IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEF+IETADG+R 
Sbjct: 125 EIHQEEGVYVPEMIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFVIETADGRRQ 184

Query: 186 KKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDL 245
           KKYKQVF+ NMGKKSEP I+KCK+G+NWT+V+FKPDLAKFNMTHLE+DVVALM+KRVVD+
Sbjct: 185 KKYKQVFSENMGKKSEPQITKCKQGENWTRVTFKPDLAKFNMTHLENDVVALMRKRVVDM 244

Query: 246 AGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR----------FHERVNERWEICVTL 295
           AG LGK+VKVEL+  +VPV SF++YV +Y KS ++            ++VN+RWE+CV+L
Sbjct: 245 AGTLGKTVKVELDHQKVPVHSFSDYVKLYIKSASKDRDDVNELPSISQKVNDRWEVCVSL 304

Query: 296 SEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFV 355
           SEGQFQQVSFVN IATIKGGTHVDYV NQ+A HVM +VNK+NKNA++KAHNVK+HLWVFV
Sbjct: 305 SEGQFQQVSFVNRIATIKGGTHVDYVTNQIATHVMNIVNKRNKNAHMKAHNVKSHLWVFV 364

Query: 356 NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
           NALIDNPAFDSQTKETLT RQ+SFGSKCELS++FLKKV   S IV  LLSWA FK SK+L
Sbjct: 365 NALIDNPAFDSQTKETLTTRQASFGSKCELSDDFLKKV-GSSAIVLNLLSWAEFKLSKEL 423

Query: 416 KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVF 475
           +K DG+K   + GI KLEDAN AGG++S  CTLILTEGDSAKALAMAG+SVVGRD +GVF
Sbjct: 424 QKTDGSKRSRLTGIPKLEDANGAGGKDSNNCTLILTEGDSAKALAMAGISVVGRDYYGVF 483

Query: 476 PLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQV 531
           PLRGKLLNVREAS  Q++ N+EI NIK+ILGL+ G +Y++ K LRYGHLMIMTDQ 
Sbjct: 484 PLRGKLLNVREASHKQIMENAEIQNIKQILGLQHGKQYDSTKGLRYGHLMIMTDQA 539


>gi|297850918|ref|XP_002893340.1| hypothetical protein ARALYDRAFT_313269 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297339182|gb|EFH69599.1| hypothetical protein ARALYDRAFT_313269 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 951

 Score =  983 bits (2540), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/1024 (50%), Positives = 692/1024 (67%), Gaps = 89/1024 (8%)

Query: 30   MYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVN 89
            MYQ+KS  EHILLRPD YIGSI++HTQ LW++E+    M++R  +YVPGL KIF+EIL+N
Sbjct: 1    MYQEKSLHEHILLRPDAYIGSIKEHTQPLWVFEKGE--MVYRRTTYVPGLCKIFEEILMN 58

Query: 90   AADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            A DNK+ DP MD++ V ID + + ISV N+G+GVPV   +E+ VY+PEL+FG LLTSS++
Sbjct: 59   AVDNKRTDPSMDSIIVKIDVDQNTISVRNNGNGVPVAQLEEKNVYIPELVFGCLLTSSHF 118

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DDN   TTGGR GYGAKLTNIFST F IET +  R +  K VFT NM +KS P ++ C+ 
Sbjct: 119  DDN---TTGGRTGYGAKLTNIFSTRFTIET-NLNRYEHEKIVFTRNMKEKSTPVVTTCES 174

Query: 210  GDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAE 269
             D WT+V+F+PDL  F+++ +  D VALM+KR+V+ A CLG++VKV +N   + V SF +
Sbjct: 175  IDKWTEVTFEPDLEMFHISKIGKDTVALMEKRIVECAACLGETVKVTINDTLLEVNSFND 234

Query: 270  YVDMYPKS-------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVA 322
            YVD+Y  +       + R   +VN++WEICV+LS+ +FQQ+SFVN IAT KGG HVDYV 
Sbjct: 235  YVDLYLGANSSRNDPLPRMTVKVNDKWEICVSLSKDKFQQISFVNSIATTKGGPHVDYVT 294

Query: 323  NQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSK 382
             Q+ + +   V KK   A V+  NVK H+WVFVN +ID+P FD   KETL   +SSFGSK
Sbjct: 295  TQIIDFITNSVKKKMNYAKVETDNVKKHMWVFVNCVIDHPVFD-WLKETLIFPESSFGSK 353

Query: 383  CELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
            C+LS++ LKK     G+V+ LLSWA  K  KDL            GI KL DAN AGG +
Sbjct: 354  CKLSKDILKK-DENPGMVKQLLSWATSKHGKDLD----------LGIEKLVDANKAGGED 402

Query: 443  SEQCTLILTEGDSAKALAMAGLSVV---GRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
            S+ CTLILTEGDSAK L M GLS +    R+ +GVFPL+GKL+NVR AS +++  N +I 
Sbjct: 403  SKLCTLILTEGDSAKTLVMTGLSFLSDESRELYGVFPLQGKLMNVRGASEDKINKNKKIQ 462

Query: 500  NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
             +K ILGL+ G EY N   LRYGH+MIMTD                            QD
Sbjct: 463  QLKTILGLENGKEYGN---LRYGHVMIMTD----------------------------QD 491

Query: 560  HDGSHIKGLLINFIHSFWPSLL-KIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKE 618
            HDG HIKGL+IN  H  WP LL + PSFL EF+TPIVKAT+++GK  +F+SMP+ + WK 
Sbjct: 492  HDGFHIKGLIINLFHVMWPELLERDPSFLCEFVTPIVKATHEDGKKETFFSMPELKKWKN 551

Query: 619  SLGGN-ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
            +L  N    W+ K YKGLGTS+ +E + YF+NI++HK+DF+W+++ DG+AI+LAF+  K 
Sbjct: 552  NLLPNDIPRWTYKTYKGLGTSSDEEAQTYFENISIHKRDFLWQNEDDGKAIDLAFNSDKP 611

Query: 678  EARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKIL 737
            E R+ WL  +                 F+NKELILFS  D +RSIP M+DGLKPGQRK L
Sbjct: 612  EDRRTWLKNYT----------------FINKELILFSKEDNRRSIPEMIDGLKPGQRKTL 655

Query: 738  FCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQF 797
            FCS  R++  E KV+  + +  + S Y+HGEQSLASTI+ MAQD+VGS+N+NLL P GQF
Sbjct: 656  FCSLARDWKTECKVSVLTAHAIDRSDYNHGEQSLASTIIKMAQDYVGSSNVNLLLPMGQF 715

Query: 798  GTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQ-IEPTWYMPIIPTVL 856
            G++  GG+DAASARY++T +SP TR LF KDDD LL +++ D Q+ IEP WY+PIIPTVL
Sbjct: 716  GSQIFGGQDAASARYLYTMISPATRALFHKDDDVLLAWMDGDNQRMIEPKWYIPIIPTVL 775

Query: 857  VNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGV 916
            VNG EGIGTGWS+++P Y+ +D++ N+ RL++GE +EPM P YRGF GTI +T   E G 
Sbjct: 776  VNGCEGIGTGWSTFVPKYSTKDVIKNIMRLMSGEALEPMVPSYRGFKGTITET---EGG- 831

Query: 917  TYTVTGIIEE-VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDF 975
             +   G+ E+ +  +T+RI ELPI+  + +Y++FL  ++   + FI+  R  S  +++D 
Sbjct: 832  -FITKGVFEKNIQNSTIRITELPIKHLS-NYKKFLH-VLKTEEKFIKEIRDNSSRSSIDI 888

Query: 976  EVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFD--SKGVIKKYDTPEQILEEFFHIR 1033
             + LS E+ M    E +  K KL T I T+NM+LFD  S+  IKKY +P         +R
Sbjct: 889  LLTLSREN-MEIADEDIYTKLKLRTKILTTNMNLFDPTSQEEIKKYGSPLDSKINSVFLR 947

Query: 1034 LEFY 1037
            LE Y
Sbjct: 948  LEIY 951


>gi|402466606|gb|EJW02059.1| hypothetical protein EDEG_03483 [Edhazardia aedis USNM 41457]
          Length = 1226

 Score =  982 bits (2539), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/936 (53%), Positives = 630/936 (67%), Gaps = 88/936 (9%)

Query: 25  KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
           KTIEE YQKKSQ+EHILLRPDTYIGSIE  TQ+L+I +     +  ++I+YVPGL+KIFD
Sbjct: 4   KTIEEQYQKKSQIEHILLRPDTYIGSIEHETQSLYILD--GARIAQKSINYVPGLFKIFD 61

Query: 85  EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
           E+LVNAADNK RD  M  VKV+ID    +ISV N G G+PV +H+ E VYVPELIFGHLL
Sbjct: 62  EVLVNAADNKIRDSNMSYVKVIIDSASCVISVENDGKGIPVAVHKTEKVYVPELIFGHLL 121

Query: 145 TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP-- 202
           TSSNY+D  KK TGGRNGYGAKL NIFS+ F++ET D      Y+Q F +NMG+K EP  
Sbjct: 122 TSSNYNDKEKKMTGGRNGYGAKLCNIFSSVFVVETRDKHLF--YRQTFYDNMGRKDEPEI 179

Query: 203 ------------NISKC---------------------------------KEG---DNWT 214
                       +I++C                                 K+G    ++T
Sbjct: 180 VDLRGKSDDEVCDITRCVFFKENKREKNKDVDSNGNGSSFNYVRESAKRAKKGAITSDFT 239

Query: 215 KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY 274
           +++FKPDL KFNM+ L+ D++AL+ KRV DL+G + K + V LN   +  K F  Y  +Y
Sbjct: 240 RITFKPDLKKFNMSSLDADIIALLSKRVYDLSGTV-KDISVFLNNREIKSKGFKSYCKLY 298

Query: 275 PKSVTR---FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
            ++      +H  VN+RWEI  + SE QF QVSFVN I T KGGTHV++V +Q+   +  
Sbjct: 299 FENADEHVFYHSVVNDRWEIVFSNSEDQFSQVSFVNSICTSKGGTHVNHVLDQIIEPIAE 358

Query: 332 VVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLK 391
            + KK K   +K   +K+ +++F+N LI+NP+FDSQTKE LTL    FGSKC   ++ +K
Sbjct: 359 HIKKKEKGLTIKPFQIKSSIFIFINCLIENPSFDSQTKENLTLNPKKFGSKCVPIDDIIK 418

Query: 392 KVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILT 451
           ++      +E ++ +A  KQS  LKK DGTKT  + GI KL+DAN+AG R S +CTLILT
Sbjct: 419 QILRNGSFIEKIVGFARAKQSAQLKKTDGTKTTRLSGIPKLDDANMAGTRQSSKCTLILT 478

Query: 452 EGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGV 511
           EGDSAKALA++GLSVVGRD +GVFPLRGKLLNVREAS  Q++ NSEI  IKKI+GL+ G 
Sbjct: 479 EGDSAKALAVSGLSVVGRDFYGVFPLRGKLLNVREASHKQIMENSEINAIKKIVGLQHGK 538

Query: 512 EYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLIN 571
            Y++V SLRYGH+MIMTDQ                            DHDGSHIKGLLIN
Sbjct: 539 AYDDVASLRYGHIMIMTDQ----------------------------DHDGSHIKGLLIN 570

Query: 572 FIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSMPDYEAWKESLGGNASSWSIK 630
           F+  F+PSLL+I SFL  FITPIV+ + KN +  + F+++P++  W+    G +  + IK
Sbjct: 571 FLDHFFPSLLRIKSFLQVFITPIVRVSKKNAQGTIDFFTLPEFYKWQAETPG-SEQYKIK 629

Query: 631 YYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPG 690
           YYKGLGTSTS + K YF N+  H K+F      D E + LAF+KKK + RK WL  + PG
Sbjct: 630 YYKGLGTSTSADAKFYFSNLPKHVKNFDELTASDKELLNLAFNKKKADQRKSWLKNWAPG 689

Query: 691 NHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAK 750
             LD     I  SDFVNKELILFSMAD  RSIP +VDG KPGQRK+LF  FKR   +E K
Sbjct: 690 VFLDNSVPQISISDFVNKELILFSMADNIRSIPCLVDGFKPGQRKVLFSCFKRKLTQEVK 749

Query: 751 VAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASA 810
           VAQ +GYVSEHSAYHHGE SL  TI+ +AQ+FVGSNNINLL PNGQFGTR QGGKDAAS 
Sbjct: 750 VAQLAGYVSEHSAYHHGEASLCGTIINLAQNFVGSNNINLLSPNGQFGTRLQGGKDAASP 809

Query: 811 RYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSY 870
           RY++T L  ITR +F  +DD +L+YL+ED   +EP +Y+PIIP VLVNG EGIGTGWS+ 
Sbjct: 810 RYLYTNLEKITRLIFRPEDDNILNYLSEDNITVEPEFYVPIIPMVLVNGPEGIGTGWSTT 869

Query: 871 IPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI 906
           IPNYN  DI+AN+R+L+N E    + P+Y+GF G+I
Sbjct: 870 IPNYNVVDIIANIRKLMNNETQTNLVPFYKGFTGSI 905



 Score =  164 bits (415), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/261 (36%), Positives = 147/261 (56%), Gaps = 39/261 (14%)

Query: 918  YTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV 977
            Y VTG+   +N   + IKELP+  WTQ Y+EFLE+++   D+ I+ F++Y  + TV F++
Sbjct: 980  YKVTGLYT-INSDEVEIKELPVGMWTQTYKEFLETLV--TDNTIKDFKEYHTENTVYFKL 1036

Query: 978  FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFY 1037
                          + KK KL+TTIS +N+  FDSKG IKKY +P +I+ EF+HIRL+FY
Sbjct: 1037 L----GTTNITHNNIEKKLKLSTTISLNNLVCFDSKGFIKKYSSPSEIINEFYHIRLQFY 1092

Query: 1038 EKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSK 1097
             KRK+  L+ L  +L KLENKVRFI  ++   +++  RK+ D+  +L  + +  F K+  
Sbjct: 1093 SKRKEYLLKCLYEDLKKLENKVRFIKEIIEETLIIRKRKKCDIEQDLENRKYDMFEKS-- 1150

Query: 1098 SIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEE 1157
                                          YDYLL+M + +LTLEK+Q L  ++++ N +
Sbjct: 1151 ------------------------------YDYLLNMPLLSLTLEKIQKLNQEKEEKNLQ 1180

Query: 1158 VDDLRKATPESLWVKDLDALD 1178
             + LRK T + LW  DL+  +
Sbjct: 1181 YNILRKKTNKDLWNDDLNEFE 1201


>gi|348677326|gb|EGZ17143.1| hypothetical protein PHYSODRAFT_559851 [Phytophthora sojae]
          Length = 1340

 Score =  976 bits (2524), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/1192 (44%), Positives = 723/1192 (60%), Gaps = 110/1192 (9%)

Query: 68   MIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDL------ISVHNSGD 121
            M  + + YVP LYKIFDEI+VNA DNK RDP M  + VVI+  +        ISV+N G 
Sbjct: 17   MKQQAVEYVPALYKIFDEIIVNAVDNKVRDPSMRHLDVVIEPGNKANGYRPWISVYNDGK 76

Query: 122  GVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 181
            G+PV+ H+ E VYVPEL+ GHLLT SN+DD   + TGGR+GYGAKLTNIFSTEF++ET D
Sbjct: 77   GIPVKFHKTEKVYVPELVLGHLLTGSNFDDTAARLTGGRHGYGAKLTNIFSTEFVVETGD 136

Query: 182  GKRLKKYKQVFTNNMGKKSEPNISKC--KEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK 239
                 +YKQV+ +NM  + EP I++   KE  ++TKVSF PDL +F M  L   +  ++K
Sbjct: 137  TSTGLRYKQVWHDNMRTRGEPEITEFTGKEAKDFTKVSFSPDLERFEMEKLTASMARVLK 196

Query: 240  KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR------------------- 280
            KRV D+AGCL   V+V LNG +VP+  F  Y+  +  S T                    
Sbjct: 197  KRVYDVAGCL-SDVEVTLNGKKVPISGFESYIKAFCHSTTTSPASKATKSNAASKDSDSK 255

Query: 281  -------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVV 333
                    + RVN+RWEI V  S+  F QVSFVNG++ ++GG+HV YV++Q+   V   V
Sbjct: 256  ASSGADYMYSRVNKRWEIGVLPSDVGFVQVSFVNGMSALRGGSHVGYVSDQICRRVAEHV 315

Query: 334  NKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKV 393
            NKK    +V    VK H+ +F+N  I+NP FDSQ KE ++ R  ++GS C LSE  LK V
Sbjct: 316  NKKYPELSVSTAQVKPHMAIFINCQIENPTFDSQMKEYMSSRPPTYGSTCALSERLLKLV 375

Query: 394  TAKSGIVETLLSWANFKQ-SKDLKKNDGTKTEDVR-GISKLEDANLAGGRNSEQCTLILT 451
             + SGIVE ++  A  +Q +  LKK   T+ +     + KLEDANLAGG  S +C+LILT
Sbjct: 376  ISDSGIVERVVQSARARQRAALLKKVSSTRAKSTSVNVPKLEDANLAGGPRSSECSLILT 435

Query: 452  EGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGV 511
            EGDSAKALA+AGL+VVGRD++GVFPLRGKLLNVR+A+  Q+  N+E  ++  ILGL+   
Sbjct: 436  EGDSAKALAVAGLAVVGRDQYGVFPLRGKLLNVRDATVAQLGKNAEFAHLCTILGLRMDE 495

Query: 512  EYNNVKS---LRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGL 568
             Y   ++   LRYG ++ MTDQ                            DHDGSHIKGL
Sbjct: 496  HYGTEEARQKLRYGRVIAMTDQ----------------------------DHDGSHIKGL 527

Query: 569  LINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS--------FYSMPDYEAWKESL 620
            L N  H+FWP LLK   F+ EFITPI+K +  + +V +        F+S+P+Y  WK +L
Sbjct: 528  LFNLFHTFWPELLKEGGFISEFITPIIKVSPTSKRVGTERGLETRRFFSLPEYFEWKAAL 587

Query: 621  G-GNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEA 679
               +   ++IKYYKGLGTSTS EG+EYF ++  H  DF W  D DG+A+++ FSK +   
Sbjct: 588  DPADLKYYTIKYYKGLGTSTSAEGREYFSDLDNHLVDFHWSGDSDGDALDMVFSKARAAD 647

Query: 680  RKKWLL-QFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 738
            RK WLL ++ P ++LD     + Y DFVN+ELI FS AD  RS+PS+VDGLK  QRK+LF
Sbjct: 648  RKAWLLNEYSPDSYLDTSSGDVTYRDFVNRELIQFSHADNARSLPSVVDGLKISQRKVLF 707

Query: 739  CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFG 798
               KR    E KVAQ +GY SEH+AYHHGE SL STI+ MAQDFVGSNN+ LL P+GQFG
Sbjct: 708  ACLKRKLTSEVKVAQLAGYCSEHTAYHHGEASLHSTIVNMAQDFVGSNNLPLLYPSGQFG 767

Query: 799  TRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVN 858
            TR QGGKDAAS RYIFT L   TR +FP++DD LL Y ++DG  +EP +Y+PIIP +LVN
Sbjct: 768  TRLQGGKDAASPRYIFTLLQKHTRLVFPEEDDALLRYADDDGFPVEPVYYVPIIPMLLVN 827

Query: 859  GSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE---------MMEPMHPWYRGFGGTIEKT 909
            G+EGIGTGWSS IP ++P  ++ N+ RLL+ E          +  M PW +GF G I +T
Sbjct: 828  GAEGIGTGWSSSIPCHHPVVVIDNLLRLLDAEEAGDDQSKVELASMTPWTKGFSGDIRQT 887

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSD 969
                   ++   G +++VN +TLR+ ELP+ +W +DY++FL  ++ +    IR F ++  
Sbjct: 888  GKH----SFVSRGNVQQVNTSTLRVTELPVGKWVEDYKKFLWDLVGKKA--IRSFSEHHS 941

Query: 970  DTTVDFEVFLSEESMMRTKQEG--------------LLKKFKLTTTISTSNMHLFDSKGV 1015
            D  V F++ ++   + +  ++G              L+K  +L   +STSNMH F++ G 
Sbjct: 942  DRDVRFDISMTRSDLAKYAEDGAKEEDSGDAGDSEALVKVLRLEAPLSTSNMHAFNADGQ 1001

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI--VVN 1073
            + KY+T E IL +F+ IR E Y KRK+   ++   E+L+L N++RFI  V  GE+  V+ 
Sbjct: 1002 LVKYETSEDILRDFYGIRRELYSKRKQHLEQHQTKEVLRLSNRIRFIQEVSFGELQKVLK 1061

Query: 1074 NR-KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLL 1132
            +R  + +L+  L++ GF+P     +     V           ++  V     S DYDYLL
Sbjct: 1062 DRIPKAELVQLLKEHGFSPASAFKEEAIDHVGDLGLAAVGRVQDDAVAEADGSDDYDYLL 1121

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL 1184
            + ++ + T E    L  + D   E++  L+  TP  LW  +L+ L   L   
Sbjct: 1122 NTSLMSFTKEFTDRLQKEHDTKQEKLQQLQATTPAQLWRSELERLRAVLSHF 1173


>gi|448934962|gb|AGE58514.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus NY-2B]
          Length = 1062

 Score =  976 bits (2523), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 540/1155 (46%), Positives = 722/1155 (62%), Gaps = 106/1155 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQ +H+L RPDTYIGS    T+  W+Y +    +I + ++Y   L KIFDEI+ N+
Sbjct: 5    YQKLSQRDHVLARPDTYIGSTAPQTKNEWVYVDGK--IIKKDVTYSSALLKIFDEIITNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   RD KM  +KV ID++   +SVHN G  +P+E H  E  Y+PELIFGHLL   N+D
Sbjct: 63   ADCYNRDKKMTMLKVCIDEKS--VSVHNDGCNIPIEKHDVEKCYIPELIFGHLLAGENFD 120

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNG G+K TNIFS  F +E  DG   KKYKQ + +NM   S+P ++ C + 
Sbjct: 121  DTEQRTGAGRNGIGSKATNIFSKIFDVEICDGN--KKYKQTWRDNMSVVSKPKVTTCSK- 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            + +   +F PD  +F +   +DD++++M++RV D+A  LGK VKV LNG R+ +K+  +Y
Sbjct: 178  NPYITTTFFPDFERFGVDTFDDDILSVMRRRVYDMAAVLGK-VKVMLNGKRLEIKNTEDY 236

Query: 271  VDMYPKS---VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVAN 327
              +Y  S     R  E   E W++ V   E  F  VSFVN + T +GGTHV+ V++ V  
Sbjct: 237  FSLYIGSKSETKRAFEHTPEEWDVGVACVE-DFTPVSFVNSVVT-RGGTHVNAVSDVVVK 294

Query: 328  HVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE 387
             V+    KK     VK   VKN ++VFVNA I NP FDSQTKE LT R +    +  L+E
Sbjct: 295  AVIEAAAKKK--IIVKPSTVKNRMFVFVNATIVNPTFDSQTKEILTSRNA----RVTLNE 348

Query: 388  EFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
             FLKK  A   +++ ++   N + S    K+LKK DGTK   V GI KL DA  AG  NS
Sbjct: 349  AFLKK--AVGVLLDVVIQETNVRTSLVDQKELKKTDGTKKIRVTGIPKLNDATWAGTNNS 406

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSA  LA+AGLSVVGR+R+GVFPLRGKLLNVR+AS   +  N EI  +K+
Sbjct: 407  KMCTLILTEGDSAATLAIAGLSVVGRERYGVFPLRGKLLNVRDASVASITKNEEITALKQ 466

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+ G  Y +  SLRYGH+MIMTD                             D DG+
Sbjct: 467  ILGLQTGKVYKDTSSLRYGHVMIMTDA----------------------------DVDGT 498

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
            HI GL++NF HS +P+LL+IP FL +FITPIV A  K  +V  F+S+PD+E + ++   +
Sbjct: 499  HISGLVMNFFHSCFPNLLEIPGFLKKFITPIVVA-RKGKEVREFFSLPDFEDFVKT--QD 555

Query: 624  ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
               W+ KY+KGLGTS+S + K+YF N+    K F+W  D  GE I+ +F+K + E RK+W
Sbjct: 556  MKKWTTKYFKGLGTSSSADAKKYFSNLKSLMKTFMWTSDS-GELIDRSFNKSRAEDRKEW 614

Query: 684  LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
            +  +EPGN LD K+  +   DF++KELILFS  DL+RSIPS+VDG KP QRK+L+ +FKR
Sbjct: 615  MTAYEPGNQLDHKKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYSAFKR 674

Query: 744  NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
            N   + KVAQFSGYV+EHSAYHHGE SL  TI+ +AQD+VGSNNIN L P GQFG+R QG
Sbjct: 675  NLTTDVKVAQFSGYVAEHSAYHHGEASLQGTIVNLAQDYVGSNNINWLLPEGQFGSRLQG 734

Query: 804  GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
            GKD ASARYIFT+L+P TR +F   DD LL YL +DG +IEP +Y+P+IP++LVNGS GI
Sbjct: 735  GKDHASARYIFTKLNPQTRQVFVDTDDNLLKYLYDDGDKIEPEYYVPVIPSILVNGSSGI 794

Query: 864  GTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGI 923
            GTGWS+ IP+YNP+DIV NV+RL+ GE +  M PW+RGF G IE+T+    GV Y   G+
Sbjct: 795  GTGWSTNIPSYNPKDIVDNVKRLIAGEDLVEMKPWFRGFKGKIEETS---PGV-YVTKGL 850

Query: 924  IEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV-FLSEE 982
                N  T+ + ELPI +WTQDY+E L+ ++++    I  FR+   DT V FE+ F+   
Sbjct: 851  YMP-NGKTIMVSELPIGKWTQDYKEHLDGLLEK--KIISDFREKHTDTDVLFEIDFVGNP 907

Query: 983  SMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKK 1042
            +         +   KL TTI ++NMH FD  G IKKYDTP  I+ E+F +R + Y KRK 
Sbjct: 908  N---------IDILKLETTIRSTNMHAFDPYGKIKKYDTPLDIIREWFGVRKDLYVKRKA 958

Query: 1043 VQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAV 1102
              LE+L       +NK RFI  V +GEI++N R  +D+  EL +  F  +  + K     
Sbjct: 959  YLLEDLTHRTNIAQNKYRFITMVNDGEIIINKRNESDISAELEKLKF--YKVDDK----- 1011

Query: 1103 VAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
                                     YDYLL+M I +LTLE+ + L  +  KL +E+DDL 
Sbjct: 1012 -------------------------YDYLLNMRISSLTLERAEELKRESVKLEKELDDLS 1046

Query: 1163 KATPESLWVKDLDAL 1177
            K T   +W  DL ++
Sbjct: 1047 KTTETDMWNHDLQSV 1061


>gi|340025908|ref|NP_048939.2| DNA topoisomerase II [Paramecium bursaria Chlorella virus 1]
 gi|338222067|gb|AAC96932.2| DNA topoisomerase II [Paramecium bursaria Chlorella virus 1]
          Length = 1061

 Score =  975 bits (2521), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/1156 (47%), Positives = 721/1156 (62%), Gaps = 107/1156 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK +Q EH+L RPDTYIGS+   T+  W+Y +    +I + ++Y P L KIFDEI+ N+
Sbjct: 4    YQKLTQREHVLARPDTYIGSVAPQTKNEWVYVDGK--IIRKDVTYSPALLKIFDEIITNS 61

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   RD K+  +KV ID++   +SVHN G  +P+E H  E  Y+PELIFGHLL   N+D
Sbjct: 62   ADCYNRDKKLTVLKVCIDEKS--VSVHNDGCNIPIEKHDVEKCYIPELIFGHLLAGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNG G+K TNIFS +F +E  DGK  KKYKQ + NNM   S+P ++ C + 
Sbjct: 120  DTEQRTGAGRNGIGSKATNIFSKKFDVEICDGK--KKYKQSWENNMSVMSKPKVTTCSK- 176

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++   +F PD  +F +   +DD +++M +RV D+A  L K VKV LNG R+ +K+  +Y
Sbjct: 177  DSYITTTFFPDFERFGIDSFDDDTMSIMVRRVYDMAAVLNK-VKVMLNGKRLEIKNTEDY 235

Query: 271  VDMYPKSVT---RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVAN 327
              +Y  + T   R  E   E W++ V+ S+ +F  VSFVN + T +GGTHV+ V + VA 
Sbjct: 236  FSLYVGNKTETKRAFEHTPENWDVAVSCSD-EFTPVSFVNSVVT-RGGTHVNAVTDAVAK 293

Query: 328  HVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE 387
                V     K   VK   VK  ++VFVNA + NP FDSQTKE LT R +    +  LS+
Sbjct: 294  --AVVEAAAKKKIVVKPMTVKGRMFVFVNATVVNPTFDSQTKEILTSRNA----RVTLSD 347

Query: 388  EFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
             F+KK  A   +++ ++   N + S    K+LKK DG K   V GI KL DA  AG  +S
Sbjct: 348  TFVKK--AVGVLLDAVIQETNVRTSLVDQKELKKTDGAKKSRVSGIPKLNDAAWAGTNHS 405

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSA  LA+AGLSVVGR+R+GVFPLRGKLLNVR+AS   +  N EI  +K+
Sbjct: 406  KMCTLILTEGDSAATLAIAGLSVVGRERYGVFPLRGKLLNVRDASVASITKNEEITALKQ 465

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+ G  Y +  SLRYGH+MIMTD                             D DG+
Sbjct: 466  ILGLQTGKVYKDTSSLRYGHVMIMTDA----------------------------DVDGT 497

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSMPDYEAWKESLGG 622
            HI GL++NF HS +PSLL+IP FL +FITPIV A  K GK V  FYS+PDYE W ++   
Sbjct: 498  HISGLVMNFFHSCFPSLLEIPGFLKKFITPIVVA--KKGKDVREFYSLPDYEDWVKTTK- 554

Query: 623  NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
            + S + IKYYKGLGTS+S + K YF N+    K F W  D  GE I+ +F+K + E RK+
Sbjct: 555  DYSKYQIKYYKGLGTSSSTDAKHYFSNLKTLMKTFTWTSDS-GELIDRSFNKTRAEDRKE 613

Query: 683  WLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
            W+  +EPGN LD K+  +   DF++KELILFS  DL+RSIPS+VDG KP QRK+L+C+FK
Sbjct: 614  WMTAYEPGNQLDHKKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYCAFK 673

Query: 743  RNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQ 802
            RN   + KVAQFSGYV+EHSAYHHGE SL  TI+ +AQD+VGSNNIN L P GQFG+R Q
Sbjct: 674  RNLTSDVKVAQFSGYVAEHSAYHHGEVSLQGTIVNLAQDYVGSNNINWLLPEGQFGSRLQ 733

Query: 803  GGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEG 862
            GGKD ASARYIFT+L+P TR +F   DD LL YL +DG +IEP  Y+PIIP++LVNGS G
Sbjct: 734  GGKDHASARYIFTKLNPKTRQVFVDTDDNLLKYLYDDGDKIEPECYVPIIPSILVNGSSG 793

Query: 863  IGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTG 922
            IGTGWS+ IP+YNP+DIV NV+RL++GE +  M PWY+GF G I +T+    GV Y   G
Sbjct: 794  IGTGWSTNIPSYNPKDIVDNVKRLISGEDLVEMKPWYKGFKGKIMETS---PGV-YVTKG 849

Query: 923  IIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV-FLSE 981
            +    N  T+ + ELP+ +WT DY+E L+ ++++    I  FR+   DT V FE+ F+  
Sbjct: 850  LYMP-NGKTIVVSELPVGKWTHDYKEHLDGLLEK--KIISDFREKHSDTDVLFEIDFVGN 906

Query: 982  ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
             +         +   KL TTI ++NMH FD  G IKKYDTP  I+ ++F +R + Y KRK
Sbjct: 907  PN---------IDILKLETTIRSTNMHAFDPSGKIKKYDTPLDIIRDWFEVRKDLYVKRK 957

Query: 1042 KVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA 1101
               LE+L       +NK RFI  V N EI++N +  + +  EL +  F            
Sbjct: 958  AYLLEDLTHRTNIAQNKHRFITMVNNDEIIINKKHESVISAELEKLNFYK---------- 1007

Query: 1102 VVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
                              V+G     YDYLL+M I +LTLE+   L  +  KLN+E+DDL
Sbjct: 1008 ------------------VDG----KYDYLLNMRISSLTLERATELEREAVKLNKELDDL 1045

Query: 1162 RKATPESLWVKDLDAL 1177
             K T   +W  DL +L
Sbjct: 1046 SKTTETDMWNNDLQSL 1061


>gi|313235194|emb|CBY25067.1| unnamed protein product [Oikopleura dioica]
          Length = 1427

 Score =  973 bits (2515), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/1205 (44%), Positives = 753/1205 (62%), Gaps = 86/1205 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE Y+K   LEH+LLRPD Y+GSIE   + +W+++ ES   + + I ++P LYKI+D
Sbjct: 3    KTIEETYKKVDSLEHVLLRPDMYVGSIEASKENMWVFDAESTQFVQKEIEFIPALYKIYD 62

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP  + VKV ID E++ ISV N+G G+P+EIH+E GVYVPELIFGH++
Sbjct: 63   EILVNAADNKVRDPNQNMVKVDIDTENNKISVLNNGKGIPIEIHKEHGVYVPELIFGHMM 122

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYD++ KKTTGGRNGYGAKL NIFSTEF +ET + K  K+    +T NM KK    I
Sbjct: 123  TSSNYDESEKKTTGGRNGYGAKLCNIFSTEFTVETVNKKIGKRLTVTWTGNMKKKGNAVI 182

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
             K    D++TK+SF PDL +FNMTHL +D+V+L +KR  D+AG     V V L+G R+  
Sbjct: 183  -KSYSKDDYTKISFTPDLKRFNMTHLSNDMVSLFRKRAYDIAGTT-PGVSVFLDGQRIAF 240

Query: 265  KS---FAEYVDMYPKS--------VTRFHER-----VNERWEICVTLSEGQFQQVSFVNG 308
                 F +Y +MY K         VT  +E+        RW++   +S+  FQ +SFVN 
Sbjct: 241  NKKDPFKDYCNMYTKGKILDTGKEVTLIYEKPENKEAKGRWDVGFAISDNGFQNISFVNS 300

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            I T KGG HV+ +++Q+   +  +VNKKNK    VKAH +K+H W+FVN+ I+NPAFDSQ
Sbjct: 301  INTSKGGHHVNAISDQLVKRLEELVNKKNKGGLAVKAHQIKSHCWIFVNSQIENPAFDSQ 360

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
            TKETLTL +S  GSK  LS+ F+KKV  KSGIVET+ ++  FK+++   K  G K + V 
Sbjct: 361  TKETLTLVKSKHGSKPILSDAFIKKV-EKSGIVETITNFMKFKENQAKGKIGGKKQKKVV 419

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVG--RDRFGVFPLRGKLLNVR 485
             I KL+DA  AG   S+ CTLILTEGDSAK  A+AG+S +   +  +GVFPLRGKLLN R
Sbjct: 420  -ILKLDDAPEAGKTRSKDCTLILTEGDSAKTAALAGVSSMADLKRYYGVFPLRGKLLNAR 478

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            EA   Q+  N EI NI + +G     +Y+N   +KSLRYG LMIMTDQ            
Sbjct: 479  EAGHQQLTKNEEIKNIIQAMGFDFKRKYDNPEDLKSLRYGRLMIMTDQ------------ 526

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA----- 597
                            D DGSHIKGL+INF+H FWP++++ P+ + +FITPIVK      
Sbjct: 527  ----------------DVDGSHIKGLIINFLHHFWPNMIRGPT-VQQFITPIVKIFLKKD 569

Query: 598  -TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKD 656
               +N K  +FYS+P++  W+  +  N  ++ ++YYKGLGTS  +E KEYFQ+I  H+  
Sbjct: 570  ENKQNCKKTNFYSLPEFNKWQREVP-NLDAYRVEYYKGLGTSGPEEFKEYFQDIQRHRIP 628

Query: 657  FVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNH---LDQKEK--YIKYSDFVNKELI 711
            F +      E I++AF++  ++ RK+WL +FE G     L  +E+  Y+ Y DF++KEL+
Sbjct: 629  FRYSGPNCDERIKMAFARDLVDDRKEWLTEFEAGEDELTLYDREQINYVTYKDFIDKELV 688

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            +FS     R+IP   DGLKPGQRK+L+  FKR    + KVAQ SG VSE SAYHHGE SL
Sbjct: 689  IFSHESCLRAIPCSADGLKPGQRKVLWTCFKRKDKSKVKVAQLSGSVSEMSAYHHGEVSL 748

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
              TI+ +AQ++VG+NN+NLL+P GQFG+R  GGKD A+ARYIFTRL+PITR L+P+ DD 
Sbjct: 749  MDTIIKLAQNYVGANNVNLLEPFGQFGSRRVGGKDHAAARYIFTRLAPITRKLYPEADDA 808

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            L     +D + +EPT Y PI+P VLVNGS GIGTGWS+ IPN+N RD + N+RR++ G+ 
Sbjct: 809  LFKRNYDDNRMVEPTHYCPIVPMVLVNGSSGIGTGWSTNIPNHNIRDCIKNIRRMIEGKE 868

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLE 951
               + P+Y G+ GTIE   +  A V++    ++E      + I ELP + WT DY++ L 
Sbjct: 869  PLDLVPFYEGYRGTIESLGTARA-VSFGEIALLE---SDVVEITELPPQVWTDDYKQKLM 924

Query: 952  SIIDQNDS-------FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTIST 1004
             +    D         I  F   S    V F V +S   M   +++GL + F L  ++  
Sbjct: 925  KMQGGQDDKGKELPKLIEDFDNNSSHDRVKFIVTMSPTQMREARKQGLHEYFGLVKSMVF 984

Query: 1005 SN-MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFIL 1063
            +N M LF+  G +  Y+    I+++ + +R  +Y KR    LE +E  +  + N+ RFIL
Sbjct: 985  ANTMVLFNHAGKLTVYNNTTDIVKDHYELRKTYYLKRHNFLLEKMEARVQFITNRARFIL 1044

Query: 1064 GVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNS--KSI--EAVVAGATDETEESEENPEV 1119
              +  +I V N KR  +  +L+++G+   P  +  K +  E  +  + DE + ++EN ++
Sbjct: 1045 ENIEKKITVMNVKRKAIEAKLKERGYASDPVKAWEKKVRKEQDLELSDDEEDAADENAQL 1104

Query: 1120 VNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
                   DY YLLSM I  LTLEK + LL ++ ++  + D L+K TP  LW +DL  L+ 
Sbjct: 1105 ---EAKSDYQYLLSMPIYNLTLEKKEALLKEKGQIEHDFDVLKKKTPTDLWEEDLLDLEK 1161

Query: 1180 QLDEL 1184
             LD++
Sbjct: 1162 TLDKI 1166


>gi|313217160|emb|CBY38323.1| unnamed protein product [Oikopleura dioica]
          Length = 1427

 Score =  973 bits (2515), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/1205 (44%), Positives = 753/1205 (62%), Gaps = 86/1205 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            KTIEE Y+K   LEH+LLRPD Y+GSIE   + +W+++ ES   + + I ++P LYKI+D
Sbjct: 3    KTIEETYKKVDSLEHVLLRPDMYVGSIEASKENMWVFDAESTQFVQKEIEFIPALYKIYD 62

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNAADNK RDP  + VKV ID E++ ISV N+G G+P+EIH+E GVYVPELIFGH++
Sbjct: 63   EILVNAADNKVRDPNQNMVKVDIDTENNKISVLNNGKGIPIEIHKEHGVYVPELIFGHMM 122

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
            TSSNYD++ KKTTGGRNGYGAKL NIFSTEF +ET + K  K+    +T NM KK    I
Sbjct: 123  TSSNYDESEKKTTGGRNGYGAKLCNIFSTEFTVETVNKKIGKRLTVTWTGNMKKKGNAVI 182

Query: 205  SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
             K    D++TK+SF PDL +FNMTHL +D+V+L +KR  D+AG     V V L+G R+  
Sbjct: 183  -KSYSKDDYTKISFTPDLKRFNMTHLSNDMVSLFRKRAYDIAGTT-PGVSVFLDGERIAF 240

Query: 265  KS---FAEYVDMYPKS--------VTRFHER-----VNERWEICVTLSEGQFQQVSFVNG 308
                 F +Y +MY K         VT  +E+        RW++   +S+  FQ +SFVN 
Sbjct: 241  NKKDPFKDYCNMYTKGKILDTGKEVTLIYEKPENKEAKGRWDVGFAISDNGFQNISFVNS 300

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            I T KGG HV+ +++Q+   +  +VNKKNK    VKAH +K+H W+FVN+ I+NPAFDSQ
Sbjct: 301  INTSKGGHHVNAISDQLVKRLEELVNKKNKGGLGVKAHQIKSHCWIFVNSQIENPAFDSQ 360

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
            TKETLTL +S  GSK  LS+ F+KKV  KSGIVET+ ++  FK+++   K  G K + V 
Sbjct: 361  TKETLTLVKSKHGSKPILSDAFIKKV-EKSGIVETITNFMKFKENQAKGKIGGKKQKKVV 419

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVG--RDRFGVFPLRGKLLNVR 485
             I KL+DA  AG   S+ CTLILTEGDSAK  A+AG+S +   +  +GVFPLRGKLLN R
Sbjct: 420  -ILKLDDAPEAGKTQSKDCTLILTEGDSAKTAALAGVSSMADLKRYYGVFPLRGKLLNAR 478

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            EA   Q+  N EI NI + +G     +Y+N   +KSLRYG LMIMTDQ            
Sbjct: 479  EAGHQQLTKNEEIKNIIQAMGFDFKRKYDNPEDLKSLRYGRLMIMTDQ------------ 526

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA----- 597
                            D DGSHIKGL+INF+H FWP++++ P+ + +FITPIVK      
Sbjct: 527  ----------------DVDGSHIKGLIINFLHHFWPNMIRGPT-VQQFITPIVKIFLKKD 569

Query: 598  -TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKD 656
               +N K  +FYS+P++  W+  +  N  ++ ++YYKGLGTS  +E KEYFQ+I  H+  
Sbjct: 570  ENKQNCKKTNFYSLPEFNKWQREVP-NLDAYRVEYYKGLGTSGPEEFKEYFQDIQRHRIP 628

Query: 657  FVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNH---LDQKEK--YIKYSDFVNKELI 711
            F +      E I++AF++  ++ RK+WL +FE G     L  +E+  Y+ Y DF++KEL+
Sbjct: 629  FRYSGPNCDERIKMAFARDLVDDRKEWLTEFEAGEDELTLYDREQINYVTYKDFIDKELV 688

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            +FS     R+IP   DGLKPGQRK+L+  FKR    + KVAQ SG VSE SAYHHGE SL
Sbjct: 689  IFSHESCLRAIPCSADGLKPGQRKVLWTCFKRKDKSKVKVAQLSGSVSEMSAYHHGEVSL 748

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
              TI+ +AQ++VG+NN+NLL+P GQFG+R  GGKD A+ARYIFTRL+PITR L+P+ DD 
Sbjct: 749  MDTIIKLAQNYVGANNVNLLEPFGQFGSRRVGGKDHAAARYIFTRLAPITRKLYPEADDA 808

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            L     +D + +EPT Y PI+P VLVNGS GIGTGWS+ IPN+N RD + N+RR++ G+ 
Sbjct: 809  LFKRNYDDNRMVEPTHYCPIVPMVLVNGSSGIGTGWSTNIPNHNIRDCIKNIRRMIEGKE 868

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLE 951
               + P+Y G+ GTIE   +  A V++    ++E      + I ELP + WT DY++ L 
Sbjct: 869  PLDLVPFYEGYRGTIESLGTARA-VSFGEIALLE---SDVVEITELPPQVWTDDYKQKLM 924

Query: 952  SIIDQNDS-------FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTIST 1004
             +    D         I  F   S    V F V +S   M   +++GL + F L  ++  
Sbjct: 925  KMQGGQDDKGKELPKLIEDFDNNSSHDRVKFIVTMSPTQMREARKQGLHEYFGLVKSMVF 984

Query: 1005 SN-MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFIL 1063
            +N M LF+  G +  Y+    I+++ + +R  +Y KR    LE +E  +  + N+ RFIL
Sbjct: 985  ANTMVLFNHAGKLTVYNNTTDIVKDHYELRKTYYLKRHNFLLEKMEARVQFITNRARFIL 1044

Query: 1064 GVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNS--KSI--EAVVAGATDETEESEENPEV 1119
              +  +I V N KR  +  +L+++G+   P  +  K +  E  +  + DE + ++EN ++
Sbjct: 1045 ENIEKKITVMNVKRKAIEAKLKERGYASDPVKAWEKKVRKEQDLELSDDEEDAADENAQL 1104

Query: 1120 VNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
                   DY YLLSM I  LTLEK + LL ++ ++  + D L+K TP  LW +DL  L+ 
Sbjct: 1105 ---EAKSDYQYLLSMPIYNLTLEKKEALLKEKGQIEHDFDVLKKKTPTDLWEEDLLDLEK 1161

Query: 1180 QLDEL 1184
             LD++
Sbjct: 1162 TLDKI 1166


>gi|297803548|ref|XP_002869658.1| hypothetical protein ARALYDRAFT_329101 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297315494|gb|EFH45917.1| hypothetical protein ARALYDRAFT_329101 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1089

 Score =  973 bits (2514), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/1173 (46%), Positives = 737/1173 (62%), Gaps = 110/1173 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y + S  EHILL PD Y+GS ++ TQ +++YE  +  M+ R +++VP   +I DEIL+NA
Sbjct: 5    YTEMSLPEHILLHPDLYLGSTKEQTQTVFVYE--NGEMVKREVNFVPAFLRIIDEILINA 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN-Y 149
            ADNKQRDP MD+++V ID E   I ++NSG G+PV I   +  Y+P ++FG +LT+S  +
Sbjct: 63   ADNKQRDPCMDSLRVFIDDEKGKICIYNSGSGIPVIILDNDN-YLPHILFGRILTTSVIH 121

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DDN KK TGGRNG GAKLTNIFS+EF IETADG+   K+ +VF NNM  + +  IS CK 
Sbjct: 122  DDNEKKITGGRNGLGAKLTNIFSSEFKIETADGE--NKFTKVFRNNMKDEDDHLISSCK- 178

Query: 210  GDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAE 269
             D +T++SF PDL K NM    + +V+LM+KRV+++A  LG SVKVELNG  +P  SF  
Sbjct: 179  -DTFTQISFTPDLQKLNMKCFGESMVSLMRKRVLEVANFLGNSVKVELNGVHIPSISFTN 237

Query: 270  YVDMY------PKSVTRFHERVN-ERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVA 322
            YV +Y      P  + R  E  N + W+ICVT S+G+FQQ SFVN +ATI GGTHVDYV 
Sbjct: 238  YVGLYLNSSKEPDPLPRIAEESNVDGWDICVTSSDGEFQQFSFVNSVATINGGTHVDYVT 297

Query: 323  NQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSK 382
            +Q+ NH++ +  +KNKN ++K H + +HLWVFVNA ID+P FD   +E LT  QSSF SK
Sbjct: 298  SQLTNHIVEIAKRKNKNTHLKTHVLMSHLWVFVNARIDSPTFDFPKREKLTSDQSSFISK 357

Query: 383  CELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
             +LSEEFLKKV AKS +VE LLS A FKQ                 I  L DAN AGG  
Sbjct: 358  GKLSEEFLKKV-AKSAVVEKLLSLATFKQR--------------LTIENLVDANHAGGDL 402

Query: 443  SEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIK 502
            S++CTLILTEGDSAKAL M G+S + R+ +GV+PLRGKL+NV++AS  ++  N  I +I 
Sbjct: 403  SQKCTLILTEGDSAKALPMVGMSALNRNLYGVYPLRGKLINVKKASEARITKNKVIRDIM 462

Query: 503  KILGLKQGV-EYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHD 561
            +I+GLK+   +Y N KSLRYG LMIMTD                            QDHD
Sbjct: 463  EIIGLKKCYNKYKNTKSLRYGRLMIMTD----------------------------QDHD 494

Query: 562  GSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVKATNK-NGKVLSFYSMPDYEAWKES 619
            G+HIKGL+IN  H+FWPSLL++ PSF+VEFITP+VKAT     ++   YS P Y  W ++
Sbjct: 495  GTHIKGLIINLFHTFWPSLLELSPSFIVEFITPLVKATQHGTHRIERIYSNPAYNNWSKT 554

Query: 620  LGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEA 679
            +  +   WSI YYKGLGT T +E  EY  +I  H K+F W  D DG +I++AF  + I A
Sbjct: 555  IEHD--KWSIDYYKGLGTCTYEEACEYLAHIDNHTKEFFWAGDNDGRSIDVAFKTEDIAA 612

Query: 680  RKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFC 739
            +K WL +  P  ++ +  + + Y  F+N+ELI  + A L+RSIPS++DG +  QRK+++ 
Sbjct: 613  KKIWLEEM-PKVYIGRLNRRMSYGSFINEELIFAAQAILERSIPSLIDGFRLAQRKVVYS 671

Query: 740  SFKR------NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQP 793
             FKR      NF ++ KV Q + YVSEH+A+HH E+SL+ TI+ MAQ FVGSNN+NLLQP
Sbjct: 672  LFKREQEANVNFEEKIKVTQLASYVSEHAAHHHCERSLSRTIIRMAQTFVGSNNVNLLQP 731

Query: 794  NGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIP 853
               FG+R  GG     ARYI T LS ITR L  KDDD +L+Y N  G++  P  ++PI+P
Sbjct: 732  FCLFGSRASGGTHDVDARYIHTLLSSITRLLIHKDDDDILEYHNVFGRKRHPECFLPIMP 791

Query: 854  TVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKE 913
             VLVNGS+ +G GW+ +IP+Y+PR I +N++RLL GE   PM PWYR F G I++ +S E
Sbjct: 792  MVLVNGSQSVGMGWNRFIPSYDPRVISSNIKRLLRGETQTPMLPWYRNFKGDIKQVSSNE 851

Query: 914  AGVTYTVTGIIEEVNET--TLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDT 971
                YT TGI  +VN+   ++RI ELP+  WT +Y + LE +  +  S I G++  SD+T
Sbjct: 852  ----YTTTGIY-DVNDKDRSIRITELPVHVWTMNYLKVLERL--KKHSVIEGYKNDSDNT 904

Query: 972  TVDFEVFLSEESMMRTKQEGLLKK-FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            ++D ++ LSEE M R   E   +K  +L+TTI T+NMHL +   V+ KY++P++ILEEFF
Sbjct: 905  SIDIKLSLSEEQMKRFLNEKNPRKLLRLSTTIRTNNMHLLNRFNVLTKYESPDKILEEFF 964

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
              RL  Y  RK+  ++ L  E  KLE KV     V+NGEI +      +L   L++KGF 
Sbjct: 965  EERLNMYRVRKEHMVQILTFERDKLECKVAIFQRVLNGEINI----ALNLDAVLQEKGFK 1020

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLT-LEKVQGLLA 1149
             + K                  ++  P          YDYL    +  +    KV  L+A
Sbjct: 1021 KYGKTI----------------NDRFPS---------YDYLTEDLMSMIRDPSKVDELMA 1055

Query: 1150 DRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
            +   +N+ +   R  T E+ W  +LDA D  L+
Sbjct: 1056 ELGDVNKRLGYYRLLTAETHWNNELDAFDKALE 1088


>gi|330793204|ref|XP_003284675.1| hypothetical protein DICPUDRAFT_28071 [Dictyostelium purpureum]
 gi|325085373|gb|EGC38781.1| hypothetical protein DICPUDRAFT_28071 [Dictyostelium purpureum]
          Length = 1260

 Score =  971 bits (2511), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/1233 (43%), Positives = 754/1233 (61%), Gaps = 134/1233 (10%)

Query: 11   TSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWI-----YEEES 65
            ++NN+++    +  + IEE+YQKK+  EH+LLRPD+YIG+IEK    +W+     + +++
Sbjct: 69   STNNSSI---NSTERKIEEIYQKKTPTEHVLLRPDSYIGTIEKIEDDMWVLSNSMFNKKT 125

Query: 66   KTMIHRTI-------------------------SYVPGLYKIFDEILVNAADNKQRDPKM 100
            KT+  +                           +YVPGL KI+DEILVNAADNK+RD  M
Sbjct: 126  KTVEKKNAQVSETDNQSSDKSSKNKTFIQPIKATYVPGLLKIYDEILVNAADNKKRDSTM 185

Query: 101  DAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGR 160
              +KV I+     IS+ N G G+P+ +H  E  YV E++ G+L++ SN++DN  K  GGR
Sbjct: 186  SFIKVEINPNKGTISIMNDGKGIPIVMHSTENCYVVEMVMGNLMSGSNFNDNELKVVGGR 245

Query: 161  NGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD-NWTKVSFK 219
            NG+GAKLTNIFS EF++ET D    KKY Q ++NNM  + +P I+  KEG+ ++TK++F 
Sbjct: 246  NGFGAKLTNIFSKEFVVETIDKSSGKKYYQKWSNNMSNREDPIITNIKEGEQDYTKITFT 305

Query: 220  PDLAKFNMTHL-EDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV 278
            PDL KF    L +DD++ LM+KR+ D+AGC    V V LNG ++    F +YV +Y   +
Sbjct: 306  PDLEKFKTNSLWDDDILQLMEKRLYDIAGC-NPEVNVYLNGVQLNY-DFEKYVKLYEHHL 363

Query: 279  TRFHER----------------VNERWEICVTLSE-GQFQQVSFVNGIATIKGGTHVDYV 321
            +   ++                ++ERW+I V LSE GQF QVSFVN I TIKGGTHV+Y+
Sbjct: 364  SGSAKKEDSEELYKEESFIFGDIDERWKIGVGLSETGQFTQVSFVNSINTIKGGTHVNYI 423

Query: 322  ANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS 381
            A Q+  ++   + KK+ +  V+  N+K+HL +FVN LIDNP+FDSQ+KETLT +   FGS
Sbjct: 424  AEQIVRYIADKMKKKHNDLEVRPINIKHHLALFVNCLIDNPSFDSQSKETLTTKSQLFGS 483

Query: 382  KCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT---KTEDVRGISKLEDANLA 438
              E+ E  L      S I+E +  W   KQ  DL     T   KT  ++ I KLEDAN A
Sbjct: 484  NPEIPESILAAFVKNSKIIERVAGWVLMKQKADLVHQSSTRQSKTALIKSIQKLEDANWA 543

Query: 439  GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
            GG+ S QCTLI+TEGDSAK+LA+AGLSV+GR+ +GVFPLRGKLLNV +    Q+LNN EI
Sbjct: 544  GGQKSNQCTLIVTEGDSAKSLALAGLSVIGRNTYGVFPLRGKLLNVCDVKPKQLLNNEEI 603

Query: 499  GNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFM 555
             N+  ILGL     Y     +K LRYG +MIM DQ                         
Sbjct: 604  NNLTNILGLSHKKTYETEEELKELRYGKIMIMADQ------------------------- 638

Query: 556  LAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEA 615
               DHDGSHIKGL+INFIH FWP+LLKI  F+ EFITPI+K +  + +  SFY++ DY+ 
Sbjct: 639  ---DHDGSHIKGLVINFIHHFWPNLLKI-GFIEEFITPIIKVSKSSTQKRSFYTIKDYQK 694

Query: 616  WKESLGGNA-SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
            W+E L  +    ++IKYYKGLGTSTS E KEYF ++  H   F W+ D D + I LAFSK
Sbjct: 695  WREGLSKDQIKQYTIKYYKGLGTSTSAEAKEYFSDLGKHVIKFKWDKDTD-KYISLAFSK 753

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
                 R+ W+ + +    +D   K + + DF+NKELI FS A   RSIPS++DGLKPGQR
Sbjct: 754  DSSSLRQTWIKESDMSQGIDHTIKEMTFPDFINKELIHFSWAANIRSIPSLIDGLKPGQR 813

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            KILF SFKR    E KV+Q SGYV+E ++YHHGEQSL STI+ MA +FVGSNNI LL P+
Sbjct: 814  KILFASFKRRLTSEIKVSQLSGYVAEQTSYHHGEQSLNSTIIKMAHNFVGSNNIPLLTPS 873

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            GQFGTR QGG D+ASARYIFT+L PI+R LF + DD LL+YL E+G+ I+P +Y+PIIP 
Sbjct: 874  GQFGTRLQGGDDSASARYIFTKLEPISRHLFNEMDDALLNYLEEEGESIQPDYYVPIIPM 933

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVAN-VRRLLNGEMMEPMHPWYRGFGGTIEKTASKE 913
            VLVNGSEGIG G ++ IP ++P D++   + RL N   ++ + PWYRGF GTI+      
Sbjct: 934  VLVNGSEGIGVGMATTIPLFSPIDLIEQIICRLDNVPPLKKIIPWYRGFKGTIQPNLK-- 991

Query: 914  AGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTV 973
               +Y   G+I + +   L I ELPI +WT DY++ L  +I+++   IRGF++ + + +V
Sbjct: 992  ---SYKTNGVI-KFDGKGLVISELPIGKWTSDYKDVLNDLIEKD--VIRGFQEANTENSV 1045

Query: 974  DFEVFLSE---ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
             F + LS    E M    +  ++  FKL++ +   N+ +FD K  I KY++PE+I++ FF
Sbjct: 1046 HFNILLSNQQMEEMEDLSENEMITLFKLSSNLHL-NLTVFDEKNKIVKYESPEEIIDHFF 1104

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
            +IRLEFY KR+   + +L  ++ +L + ++F+  + +G++ +  R +  L+ +L      
Sbjct: 1105 NIRLEFYNKRRSHLMASLTQQIKRLSSTIKFLETIASGKLKIQGRTKQQLIDDLES---- 1160

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLAD 1150
                              + +     PE        +Y +L S++I  +T E++  L + 
Sbjct: 1161 ------------------QHDFGSHTPE--------EYQHLFSLSILDITKERIDNLQSQ 1194

Query: 1151 RDKLNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
             +K   E + ++ +   SLW  DL  L   L++
Sbjct: 1195 LNKRQVEFNQIKDSDSSSLWKADLKQLKEYLEK 1227


>gi|448930832|gb|AGE54396.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus IL-5-2s1]
          Length = 1063

 Score =  971 bits (2511), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/1156 (46%), Positives = 719/1156 (62%), Gaps = 107/1156 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQ +H+L RPDTYIGS    T+  W+Y   +  +I + ++Y   L KIFDEI+ N+
Sbjct: 5    YQKLSQRDHVLARPDTYIGSTIPQTKNEWVYV--NGKVIKKDVTYSSALLKIFDEIITNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   RD ++  +K+ ID+    +SVHN G  +P+E H  E  Y+PELIFGHLL   N+D
Sbjct: 63   ADCYNRDKRLTILKICIDETS--VSVHNDGCSIPIEKHDIEKCYIPELIFGHLLAGENFD 120

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNG G+K TNIFS  F +E  DG   KKYKQ + +NM   S+P ++ C + 
Sbjct: 121  DTEQRTGAGRNGIGSKATNIFSRIFDVEICDGN--KKYKQTWRDNMSIVSKPKVTTCSK- 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            + +   +F PD  +F +   +DD++++M++RV D+A  LGK VKV LNG R+ +K+  +Y
Sbjct: 178  NPYITTTFFPDFVRFGVETFDDDILSVMRRRVYDMAAVLGK-VKVMLNGKRLEIKNTEDY 236

Query: 271  VDMYPKSVT---RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVAN 327
              +Y  S T   R  E   E W++ V   E  F  VSFVN + T +GGTHV+ V + ++ 
Sbjct: 237  FSLYIGSKTETKRAFEHTPEEWDVGVACVE-DFTPVSFVNSVVT-RGGTHVNAVTDAISK 294

Query: 328  HVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE 387
             V+    KK     V+   VKN ++VFVNA I NP FDSQTKE LT R +    +  LS+
Sbjct: 295  AVVEAAAKKK--ITVRPLTVKNRMFVFVNATIVNPTFDSQTKEILTSRNA----RVTLSD 348

Query: 388  EFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
             F+KK  A   +++ ++   N + S    K+LKK DG K   V GI KL DA  AG  NS
Sbjct: 349  AFMKK--AVGVLLDAVIQETNVRTSLIDQKELKKTDGAKKIRVTGIPKLNDATWAGTNNS 406

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSA  LA+AGLSVVGRD++GVFPLRGKLLNVR+AS   +  N EI  +K+
Sbjct: 407  KLCTLILTEGDSAATLAIAGLSVVGRDKYGVFPLRGKLLNVRDASVASITKNEEITALKQ 466

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+ G  Y +   LRYGH+MIMTD                             D DG+
Sbjct: 467  ILGLQTGKVYKDTSYLRYGHVMIMTDA----------------------------DVDGT 498

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSMPDYEAWKESLGG 622
            HI GL++NF HS +PSLL+IP FL +FITPIV A  K GK V  FYS+PDYE W + +  
Sbjct: 499  HISGLVMNFFHSCFPSLLEIPGFLRKFITPIVVA--KRGKDVREFYSLPDYEDWMK-ITK 555

Query: 623  NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
            + S + IKYYKGLGTS+S + K YF N+    K F W  D  GE I+ +F+K + E RK+
Sbjct: 556  DYSKYQIKYYKGLGTSSSTDAKHYFSNLKTLMKTFTWTSDS-GELIDRSFNKTRAEDRKE 614

Query: 683  WLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
            W+  +EPGN LD K+  +   DF++KELILFS  DL+RSIPS+VDG KP QRK+L+C+FK
Sbjct: 615  WMTAYEPGNQLDHKKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYCAFK 674

Query: 743  RNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQ 802
            RN   + KVAQFSGYV+EHSAYHHGE SL  TI+ +AQD+VGSNNIN L P GQFG+R Q
Sbjct: 675  RNLTSDVKVAQFSGYVAEHSAYHHGEVSLQGTIVNLAQDYVGSNNINWLLPEGQFGSRLQ 734

Query: 803  GGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEG 862
            GGKD ASARYIFT+L+P TR +F   DD LL YL +DG +IEP +Y+P+IP++LVNGS G
Sbjct: 735  GGKDHASARYIFTKLNPKTRQVFVDTDDNLLKYLYDDGDKIEPEYYVPVIPSILVNGSSG 794

Query: 863  IGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTG 922
            IGTGWS+ IP+YNP+DIV NV+RL++GE +  M PWY+GF G I +T+    GV Y   G
Sbjct: 795  IGTGWSTNIPSYNPKDIVDNVKRLISGEDLVEMKPWYKGFKGKIMETS---PGV-YVTKG 850

Query: 923  IIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV-FLSE 981
            +    N  T+ + ELPI +WTQDY+E L+ ++++    I  FR+   DT V FE+ F+  
Sbjct: 851  LYMP-NGKTIVVSELPIGKWTQDYKEHLDGLLEKK--IISDFREKHSDTDVLFEIDFVGN 907

Query: 982  ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
             +         +   KL TTI ++NMH FD  G IKKYDTP  I+ ++F +R + Y KRK
Sbjct: 908  PN---------IDILKLETTIRSTNMHAFDPSGKIKKYDTPLDIIRDWFEVRKDLYVKRK 958

Query: 1042 KVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA 1101
               LE+L       +NK RFI  V N EI++N +  + +  EL +  F  +  + K    
Sbjct: 959  AYLLEDLTHRTNIAQNKHRFITMVNNDEIIINKKHESVISAELEKLKF--YKVDDK---- 1012

Query: 1102 VVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
                                      YDYLL+M I +LTLE+ + L  +  KL +E+DDL
Sbjct: 1013 --------------------------YDYLLNMRISSLTLERAEELKRESVKLEKELDDL 1046

Query: 1162 RKATPESLWVKDLDAL 1177
             K T   +W  DL ++
Sbjct: 1047 SKTTETDMWNHDLQSV 1062


>gi|125540787|gb|EAY87182.1| hypothetical protein OsI_08583 [Oryza sativa Indica Group]
          Length = 1486

 Score =  971 bits (2510), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 552/963 (57%), Positives = 658/963 (68%), Gaps = 88/963 (9%)

Query: 596  KATNKNGK--VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLH 653
            +ATNK  K  VL FYSMP+YE WKESLGGNAS WSIKYYKGLGTSTS EG++YFQ+I  H
Sbjct: 538  QATNKRDKKIVLPFYSMPEYEQWKESLGGNASGWSIKYYKGLGTSTSSEGRQYFQDIAKH 597

Query: 654  KKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILF 713
            KKDFVW++DQD   IELAFSKK+I  RK+WL  F+ G HLD + KYIKYSDF+NKELI F
Sbjct: 598  KKDFVWKNDQDDNDIELAFSKKRITDRKEWLTNFQSGTHLDTEGKYIKYSDFINKELIQF 657

Query: 714  SMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAS 773
            SMADL RSIPSMVDGLKPGQRKILFCSFKRN +KE KVAQFSGYVSEHSAYHHGEQSLAS
Sbjct: 658  SMADLLRSIPSMVDGLKPGQRKILFCSFKRNLVKEIKVAQFSGYVSEHSAYHHGEQSLAS 717

Query: 774  TILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLL 833
            TI GMAQDFVGSNNINLLQPNGQFGTR+QGGKDAASARYIFT LSPITR +FPKDDD LL
Sbjct: 718  TITGMAQDFVGSNNINLLQPNGQFGTRDQGGKDAASARYIFTLLSPITRSIFPKDDDILL 777

Query: 834  DYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMME 893
            +YL+EDGQ IEPTWY+PI+P VLVNGSEGIGTGWS++IPNYNPRDIVAN+RRLLN E +E
Sbjct: 778  NYLDEDGQSIEPTWYVPILPMVLVNGSEGIGTGWSTFIPNYNPRDIVANLRRLLNDEPVE 837

Query: 894  PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI 953
            PM PWYRGF G+I+KT +K  GV+YTVTGIIE V++TTLRI ELPIRRW+QDY+EFL SI
Sbjct: 838  PMDPWYRGFKGSIQKTGTKAGGVSYTVTGIIEVVDDTTLRITELPIRRWSQDYKEFLISI 897

Query: 954  --------------------------IDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRT 987
                                          + FI  F  YSDD  V+F + LS+E+M   
Sbjct: 898  GGTDKSKDKDKDKGKGKGKVKEKEKKEKDIEPFIEAFDTYSDDKNVEFLITLSKENMAIA 957

Query: 988  KQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLEN 1047
             QEGL KKFKLTTTI T+NMHLFDS G I+KYDTPE IL+EFF +RLEFYEKRK+V LEN
Sbjct: 958  LQEGLEKKFKLTTTIGTTNMHLFDSNGKIRKYDTPEDILKEFFGLRLEFYEKRKRVLLEN 1017

Query: 1048 LELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGAT 1107
            +ELEL KL NKVRFIL VV G+I+VNNRKR +L +EL+QKGF PFP+  +       GA 
Sbjct: 1018 IELELKKLSNKVRFILAVVEGDIIVNNRKRAELFVELKQKGFDPFPRKKQRAGPSAVGAI 1077

Query: 1108 DETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPE 1167
            +E EE+EE+PE  N V S DY+YLLSMAIGTLTLE+VQ L+A++ ++  EV +L++  P+
Sbjct: 1078 EEDEENEESPEAAN-VGSSDYEYLLSMAIGTLTLERVQQLIAEKSRMENEVAELKRTRPK 1136

Query: 1168 SLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSN 1227
            SLW++DLDA + +LD LD+ D+   EER   +  G G A      +R  K A       +
Sbjct: 1137 SLWMRDLDAFEKELDALDEKDSMDAEERRATRNAGGGAAPKAAPKRRPRKTATNTQAAES 1196

Query: 1228 NARATEAMGEMDNVTKVVKPKGRAGL------------------KKAPAEK----LDDDE 1265
            +     A           KP G+A L                  KK PA+K    L DDE
Sbjct: 1197 SDGNAAAPAVPKPAAPRKKPAGKASLADSEDEDYVAAIPKPAAQKKQPAKKASTQLSDDE 1256

Query: 1266 EDEVPDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKK--KEPSKRTAAQKKV- 1322
            +DEV  LK RLA  N        + S D +   ET + Q   KK  KEPSKR AA+K + 
Sbjct: 1257 DDEVLALKDRLAAYNLD------DHSEDTAMETETTEEQAKGKKGRKEPSKRGAAKKAIS 1310

Query: 1323 -VTVETSDSEDEII-IDDDEAFEIAAPEEGKKGGRKAAGNSKAA-KPAAETKKRGPAKKQ 1379
             + V + D EDE + ID+D+  + A  E   K GR   G   AA KP A T+KR PA+ +
Sbjct: 1311 SLAVISDDEEDETVPIDEDDEDDFAMEEVPVKKGR---GKKPAAEKPKAATRKRAPAQGK 1367

Query: 1380 QPEASLGQRLLTEMLKPAES------SPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGS 1433
                S+ Q+++ EM KP E       SPEKKVRKMRASPF+KKSGS+L RA T    +  
Sbjct: 1368 ----SMRQKVMEEMFKPTEDSSTSAPSPEKKVRKMRASPFHKKSGSVLQRASTASTSTEE 1423

Query: 1434 SPSTSEEVAEVLPPKARPQRANR-----RQARYVLSDSESE----KATDDSEF---DEDE 1481
            + S+S   +   P  ARP+R  R      Q    LSD ++E      +DDS+F   D  E
Sbjct: 1424 TESSSPSGSSAEPVAARPKRQTRGNKKSYQEVQELSDDDTEDEVQDISDDSDFAGSDFGE 1483

Query: 1482 DED 1484
            D+D
Sbjct: 1484 DDD 1486



 Score =  827 bits (2136), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/536 (72%), Positives = 459/536 (85%), Gaps = 13/536 (2%)

Query: 6   RLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES 65
           RLPL +S+  N        KTIEEMYQKK+QLEHILLRPDTYIGS+EKHT  LW+YE+ +
Sbjct: 7   RLPLQSSSGHNAAAGGGGGKTIEEMYQKKTQLEHILLRPDTYIGSVEKHTAQLWVYEDGA 66

Query: 66  KTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPV 125
             M+ R+++YVPGLYKIFDEILVNAADNKQRDP MD+++V ID +   ISV+N+GDG+PV
Sbjct: 67  --MVSRSVTYVPGLYKIFDEILVNAADNKQRDPSMDSLRVEIDADEGRISVYNNGDGIPV 124

Query: 126 EIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRL 185
           EIHQEEGVYVPE+IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEF+IETADG+R 
Sbjct: 125 EIHQEEGVYVPEMIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFVIETADGRRQ 184

Query: 186 KKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDL 245
           KKYKQVF+ NMGKKSEP I+KCK+G+NWT+V+FKPDLAKFNMTHLE+DVVALM+KRVVD+
Sbjct: 185 KKYKQVFSENMGKKSEPQITKCKQGENWTRVTFKPDLAKFNMTHLENDVVALMRKRVVDM 244

Query: 246 AGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR----------FHERVNERWEICVTL 295
           AG LGK+VKVEL+  +VPV SF++YV +Y KS ++            ++VN+RWE+CV+L
Sbjct: 245 AGTLGKTVKVELDHQKVPVHSFSDYVKLYIKSASKDRDDVNELPSISQKVNDRWEVCVSL 304

Query: 296 SEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFV 355
           SEGQFQQVSFVN IATIKGGTHVDYV NQ+A HVM +VNK+NKNA++KAHNVK+HLWVFV
Sbjct: 305 SEGQFQQVSFVNRIATIKGGTHVDYVTNQIATHVMNIVNKRNKNAHMKAHNVKSHLWVFV 364

Query: 356 NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
           NALIDNPAFDSQTKETLT RQ+SFGSKCELS++FLKKV   S IV  LLSWA FK SK+L
Sbjct: 365 NALIDNPAFDSQTKETLTTRQASFGSKCELSDDFLKKV-GSSAIVLNLLSWAEFKLSKEL 423

Query: 416 KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVF 475
           +K DG+K   + GI KLEDAN AGG++S  CTLILTEGDSAKALAMAG+SVVGRD +GVF
Sbjct: 424 QKTDGSKRSRLTGIPKLEDANGAGGKDSNNCTLILTEGDSAKALAMAGISVVGRDYYGVF 483

Query: 476 PLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQV 531
           PLRGKLLNVREAS  Q++ N+EI NIK+ILGL+ G +Y++ K LRYGHLMIMTDQ 
Sbjct: 484 PLRGKLLNVREASHKQIMENAEIQNIKQILGLQHGKQYDSTKGLRYGHLMIMTDQA 539


>gi|157953897|ref|YP_001498788.1| hypothetical protein AR158_C707L [Paramecium bursaria Chlorella virus
            AR158]
 gi|156068545|gb|ABU44252.1| hypothetical protein AR158_C707L [Paramecium bursaria Chlorella virus
            AR158]
          Length = 1062

 Score =  971 bits (2510), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/1155 (46%), Positives = 718/1155 (62%), Gaps = 106/1155 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQ +H+L RPDTYIGS    T+  W+Y +    +I + ++Y   L KIFDEI+ N+
Sbjct: 5    YQKLSQRDHVLARPDTYIGSTAPQTKNEWVYVDGK--VIKKDVTYSSALLKIFDEIITNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   RD ++  +K+ ID+    +SV N G  +P+E H  E  Y+PELIFGHLL   N+D
Sbjct: 63   ADCYNRDKRLTILKICIDETS--VSVFNDGCLIPIEKHDVEKCYIPELIFGHLLAGENFD 120

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNG G+K TNIFS  F +E  DG   KKYKQ + +NM   S+P ++ C + 
Sbjct: 121  DTEQRTGAGRNGIGSKATNIFSKIFDVEICDGN--KKYKQTWRDNMSVVSKPKVTTCSK- 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            + +   +F PD  +F +   +DD++++M++RV D+A  LGK VKV LNG R+ +K+  +Y
Sbjct: 178  NPYITTTFFPDFERFGVDTFDDDILSVMRRRVYDMAAVLGK-VKVMLNGKRLEIKNTEDY 236

Query: 271  VDMYPKS---VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVAN 327
              +Y  S     R  E   E W++ V   E  F  VSFVN + T +GGTHV+ V++ V  
Sbjct: 237  FSLYIGSKSETKRAFEHTPEEWDVGVACVE-DFTPVSFVNSVVT-RGGTHVNAVSDVVVK 294

Query: 328  HVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE 387
             V+    KK     VK   VKN ++VFVNA I NP FDSQTKE LT R +    +  LSE
Sbjct: 295  AVIEAAAKKK--IIVKPSTVKNRMFVFVNATIVNPTFDSQTKEILTSRNA----RVTLSE 348

Query: 388  EFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
             FLKK  A   +++ ++   N + S    K+LKK DGTK   V GI KL DA  AG  NS
Sbjct: 349  AFLKK--AVGVLLDVVIQETNVRTSLVDQKELKKTDGTKKIRVTGIPKLNDATWAGTNNS 406

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSA  LA+AGLSVVGR+R+GVFPLRGKLLNVR+AS   +  N EI  +K+
Sbjct: 407  KMCTLILTEGDSAATLAIAGLSVVGRERYGVFPLRGKLLNVRDASVASITKNEEITALKQ 466

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+ G  Y +  SLRYGH+MIMTD                             D DG+
Sbjct: 467  ILGLQTGKVYKDTSSLRYGHVMIMTDA----------------------------DVDGT 498

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
            HI GL++NF HS +P+LL+IP FL +FITPIV A  K  +V  F+S+PD+E + ++   +
Sbjct: 499  HISGLVMNFFHSCFPNLLEIPGFLKKFITPIVVA-RKGKEVREFFSLPDFEDFVKT--QD 555

Query: 624  ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
               W+ KY+KGLGTS+S + K+YF N+    K F+W  D  GE I+ +F+K + E RK+W
Sbjct: 556  MKKWTTKYFKGLGTSSSADAKKYFSNLKSLMKTFMWTSDS-GELIDRSFNKSRAEDRKEW 614

Query: 684  LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
            +  +EPGN LD K+  +   DF++KELILFS  DL+RSIPS+VDG KP QRK+++ +FKR
Sbjct: 615  MTAYEPGNQLDHKKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVIYSAFKR 674

Query: 744  NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
            N   + KVAQFSGYV+EHSAYHHGE SL  TI+ +AQD+VGSNNIN L P GQFG+R QG
Sbjct: 675  NLTTDVKVAQFSGYVAEHSAYHHGEASLQGTIVNLAQDYVGSNNINWLLPEGQFGSRLQG 734

Query: 804  GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
            GKD ASARYIFT+L+P TR +F   DD LL YL +DG +IEP +Y+P+IP++LVNGS GI
Sbjct: 735  GKDHASARYIFTKLNPQTRQVFVDTDDNLLKYLYDDGDKIEPEYYVPVIPSILVNGSSGI 794

Query: 864  GTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGI 923
            GTGWS+ IP+YNP+DIV NV+RL+ GE +  M PWYRGF G IE+T+       Y   G+
Sbjct: 795  GTGWSTNIPSYNPKDIVDNVKRLIAGEDLVEMKPWYRGFKGKIEETSPD----VYVTKGL 850

Query: 924  IEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV-FLSEE 982
                N  T+ + ELPI +WTQDY+E L+ ++++    I  FR+   DT V FE+ F+   
Sbjct: 851  YMP-NGKTIVVSELPIGKWTQDYKEHLDGLLEK--KIISDFREKHTDTDVLFEIDFIGNP 907

Query: 983  SMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKK 1042
            +         +   KL TTI ++NMH FD  G IKKYDTP  I+ E+F +R + Y KRK 
Sbjct: 908  N---------VDILKLETTIRSTNMHAFDPYGKIKKYDTPLDIIREWFGVRKDLYVKRKA 958

Query: 1043 VQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAV 1102
              LE+L       +NK RFI  V +GEI++N R  +D+  EL +  F  +  + K     
Sbjct: 959  YLLEDLTHRTNIAQNKYRFITMVNDGEIIINKRNESDISAELEKLKF--YKVDDK----- 1011

Query: 1103 VAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
                                     YDYLL+M I +LTLE+ + L  +  KL +E+DDL 
Sbjct: 1012 -------------------------YDYLLNMRISSLTLERAEELKRESVKLEKELDDLS 1046

Query: 1163 KATPESLWVKDLDAL 1177
            K T   +W  DL ++
Sbjct: 1047 KTTETDMWNHDLQSV 1061


>gi|295668785|ref|XP_002794941.1| DNA topoisomerase [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226285634|gb|EEH41200.1| DNA topoisomerase [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1582

 Score =  969 bits (2506), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/934 (52%), Positives = 639/934 (68%), Gaps = 58/934 (6%)

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
             ++E +Y+PELIFGHLLTSSNY+D  +K TGGRNGYGAKL NIFSTEF IETAD ++ KK
Sbjct: 125  QKKEKLYIPELIFGHLLTSSNYNDMQQKVTGGRNGYGAKLCNIFSTEFTIETADSRQNKK 184

Query: 188  YKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
            YKQ +TNNM K  +  I+ CK G ++TKV+F PD  KF M  ++DD  AL+K+RV D+AG
Sbjct: 185  YKQTWTNNMSKMGKAKITDCK-GQDYTKVTFTPDFKKFGMEGVDDDFEALVKRRVYDMAG 243

Query: 248  CLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR-------------FHERVNERWEICVT 294
                 V V+LNG R+PV++F +Y+ MY  ++ +               +  + RWE+   
Sbjct: 244  TC--KVIVKLNGSRIPVRNFKQYMAMYTNAIKKERGEEAAKDKTEILLDNPDPRWEVGFA 301

Query: 295  LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWV 353
            +S+G FQQVSFVN IAT  GG+HV+ VA+Q+ N +   V K+NK  A++K   ++NH++V
Sbjct: 302  VSDGSFQQVSFVNSIATTSGGSHVNAVADQICNRLAETVKKRNKTGASLKPAQIRNHIFV 361

Query: 354  FVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSK 413
            FVN+ I NPAF SQTKE LT + S FGSK  LSEEFLKKV  K+ ++E ++ +A  K  +
Sbjct: 362  FVNSQIVNPAFTSQTKEQLTTKPSQFGSKIVLSEEFLKKVI-KTQVMENIMHFAEKKADQ 420

Query: 414  DLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFG 473
             LKK+DG +   +    KL DAN AG +    CTLILTEGDSAK LAMAG ++VG D FG
Sbjct: 421  ILKKSDGNRRSRMNN-PKLTDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAIVGPDLFG 479

Query: 474  VFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLL 533
            VFPLRGK+LNVR+AS +Q+  N+EI NIK  LGL+   EY + K LRYGHLMIMTDQ   
Sbjct: 480  VFPLRGKMLNVRDASVDQISKNAEIQNIKNFLGLQHKKEYTDTKGLRYGHLMIMTDQ--- 536

Query: 534  APLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITP 593
                                     DHDGSHIKGLLINF+   +PSLLKIP FL+EFITP
Sbjct: 537  -------------------------DHDGSHIKGLLINFLQVAFPSLLKIPQFLIEFITP 571

Query: 594  IVKATNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
            IVK    + K      SF++M +YE WKE + G+   W  KYYKGLGTST+++ + YFQ+
Sbjct: 572  IVKVWKGDPKNPIISKSFFTMQEYETWKE-IHGHDRRWEKKYYKGLGTSTTEDAEIYFQD 630

Query: 650  ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKE 709
            +  H K F    D + + I+LAFSKKK + RK+WL QF+PG  LD   + I Y+DF+NKE
Sbjct: 631  LDKHLKQFHVMQDNEAQLIDLAFSKKKADERKEWLRQFKPGTFLDHTTEEITYTDFINKE 690

Query: 710  LILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQ 769
            LILFSMAD  RSIPS+VDGLKPGQRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ 
Sbjct: 691  LILFSMADNIRSIPSVVDGLKPGQRKVLYTCFKRNVRKDIKVVELAGYVSGMTAYQHGDV 750

Query: 770  SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
            SL  TI+G+AQ FVGSNN+N L+P+G FG+R QGG D+ASARYI+TRLSP  R +F   D
Sbjct: 751  SLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRLQGGSDSASARYIYTRLSPFARRIFHPAD 810

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
            + LL Y  +DG  IEP  Y+P++P VL+NG++GIGTGWS+ IPNYNP DIVAN++ L++G
Sbjct: 811  EPLLTYNVDDGHTIEPEIYVPVVPLVLINGADGIGTGWSTSIPNYNPEDIVANLKCLMDG 870

Query: 890  EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREF 949
            E + PM PW+RGF G +        G  Y  +G I +V E  + I ELPIR WTQD+++ 
Sbjct: 871  EPLVPMQPWFRGFTGEVVSL----GGERYKFSGRISQVGENEVEITELPIRCWTQDFKDR 926

Query: 950  LESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
            LE II  ++  SFI+ ++ Y+  T V F + L E+   +   EGL +KFKL+ TI+TSN+
Sbjct: 927  LEEIIKAEKVPSFIKDYKDYNTHTKVHFVIQLDEKHAAKAIAEGLEEKFKLSKTIATSNL 986

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
              FD +G I KYD+PE IL EF+ +R++FYEKRK
Sbjct: 987  VAFDPEGRITKYDSPEDILREFYSVRIKFYEKRK 1020


>gi|226294840|gb|EEH50260.1| DNA topoisomerase [Paracoccidioides brasiliensis Pb18]
          Length = 1760

 Score =  968 bits (2503), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/934 (52%), Positives = 639/934 (68%), Gaps = 58/934 (6%)

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
             ++E +Y+PELIFGHLLTSSNY+D  +K TGGRNGYGAKL NIFSTEF IETAD ++ KK
Sbjct: 302  QKKEKLYIPELIFGHLLTSSNYNDMQQKVTGGRNGYGAKLCNIFSTEFTIETADSRQNKK 361

Query: 188  YKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
            YKQ +TNNM K  +  I+ CK G ++TKV+F PD  KF M  ++DD  AL+K+RV D+AG
Sbjct: 362  YKQTWTNNMSKMGKAKITDCK-GQDYTKVTFTPDFKKFGMEGVDDDFEALVKRRVYDMAG 420

Query: 248  CLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR-------------FHERVNERWEICVT 294
                 V V+LNG R+PV++F +Y+ MY  ++ +               +  + RWE+   
Sbjct: 421  TC--KVIVKLNGSRIPVRNFKQYMAMYTNAIKKERGEEAAKDKTEILLDNPDPRWEVGFA 478

Query: 295  LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWV 353
            +S+G FQQVSFVN IAT  GG+HV+ VA+Q+ N +   V K+NK  A++K   ++NH++V
Sbjct: 479  VSDGSFQQVSFVNSIATTSGGSHVNAVADQICNRLAETVKKRNKTGASLKPAQIRNHIFV 538

Query: 354  FVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSK 413
            FVN+ I NPAF SQTKE LT + S FGSK  LSEEFLKKV  K+ ++E ++ +A  K  +
Sbjct: 539  FVNSQIVNPAFTSQTKEQLTTKPSQFGSKIVLSEEFLKKVI-KTQVMENIMHFAEKKADQ 597

Query: 414  DLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFG 473
             LKK+DG +   +    KL DAN AG +    CTLILTEGDSAK LAMAG ++VG D FG
Sbjct: 598  ILKKSDGNRRSRMNN-PKLTDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAIVGPDLFG 656

Query: 474  VFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLL 533
            VFPLRGK+LNVR+AS +Q+  N+EI NIK  LGL+   EY + K LRYGHLMIMTDQ   
Sbjct: 657  VFPLRGKMLNVRDASVDQISKNAEIQNIKNFLGLQHKKEYTDTKGLRYGHLMIMTDQ--- 713

Query: 534  APLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITP 593
                                     DHDGSHIKGLLINF+   +PSLLKIP FL+EFITP
Sbjct: 714  -------------------------DHDGSHIKGLLINFLQVAFPSLLKIPQFLIEFITP 748

Query: 594  IVKATNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
            IVK    + K      SF++M +YE WKE + G+   W  KYYKGLGTST+++ + YFQ+
Sbjct: 749  IVKVWKGDPKNPIISKSFFTMQEYETWKE-IHGHDRRWEKKYYKGLGTSTTEDAEIYFQD 807

Query: 650  ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKE 709
            +  H K F    D + + I+LAFSKKK + RK+WL QF+PG  LD   + I Y+DF+NKE
Sbjct: 808  LDKHLKQFHVMQDNEAQLIDLAFSKKKADERKEWLRQFKPGTFLDHTTEEITYTDFINKE 867

Query: 710  LILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQ 769
            LILFSMAD  RSIPS+VDGLKPGQRK+L+  FKRN  K+ KV + +GYVS  +AY HG+ 
Sbjct: 868  LILFSMADNIRSIPSVVDGLKPGQRKVLYTCFKRNVRKDIKVVELAGYVSGMTAYQHGDV 927

Query: 770  SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
            SL  TI+G+AQ FVGSNN+N L+P+G FG+R QGG D+ASARYI+TRLSP  R +F   D
Sbjct: 928  SLQQTIVGLAQTFVGSNNVNCLEPSGNFGSRLQGGSDSASARYIYTRLSPFARRIFHPAD 987

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
            + LL Y  +DG  IEP  Y+P++P VL+NG++GIGTGWS+ IPNYNP DIVAN++ L++G
Sbjct: 988  EPLLTYNVDDGHTIEPEIYVPVVPLVLINGADGIGTGWSTSIPNYNPEDIVANLKCLMDG 1047

Query: 890  EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREF 949
            E + PM PW+RGF G +        G  Y  +G I +V E  + I ELPIR WTQD+++ 
Sbjct: 1048 EPLVPMQPWFRGFTGEVVSL----GGERYKFSGRISQVGENEVEITELPIRCWTQDFKDR 1103

Query: 950  LESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
            LE II  ++  SFI+ ++ Y+  T V F + L E+   +   EGL +KFKL+ TI+TSN+
Sbjct: 1104 LEEIIKAEKVPSFIKDYKDYNTHTKVHFVIQLDEKHAAKAIAEGLEEKFKLSKTIATSNL 1163

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
              FD +G I KYD+PE IL EF+ +R++FYEKRK
Sbjct: 1164 VAFDPEGRITKYDSPEDILREFYSVRIKFYEKRK 1197


>gi|1834317|dbj|BAA11510.1| DNA topoisomerase II [Dictyostelium discoideum]
          Length = 1282

 Score =  966 bits (2497), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 539/1231 (43%), Positives = 762/1231 (61%), Gaps = 142/1231 (11%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWI-----YEEESKTM----------- 68
            + IE++YQKK+  EH+LLRPD+YIG+IEK    +W+     + +E KT+           
Sbjct: 85   RKIEDIYQKKTPTEHVLLRPDSYIGTIEKIEDDMWVLSNSMFNKEKKTIELNNDNNEKNV 144

Query: 69   -----------------IHRT-ISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQE 110
                             IH    +Y+PGL KI+DEILVNAADNK+RD KM  +KV I+  
Sbjct: 145  ESTTTTTTKTNKKPLTYIHPIKATYIPGLLKIYDEILVNAADNKKRDSKMSFIKVEINPN 204

Query: 111  HDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNI 170
             + IS+ N G G+PV +HQ E  YV E++ G+L++ SN++D+  K  GGRNG+GAKLTNI
Sbjct: 205  ENSISIMNDGKGIPVVMHQTENCYVVEMVMGNLMSGSNFNDSELKVVGGRNGFGAKLTNI 264

Query: 171  FSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD-NWTKVSFKPDLAKFNMTH 229
            FS EF +ET D    KKY Q ++NNMG +SEP I+   EG+ ++TK++FKPDL KF +  
Sbjct: 265  FSKEFTVETVDKSSGKKYFQRWSNNMGDRSEPIITPIGEGESDYTKITFKPDLEKFKIKS 324

Query: 230  LEDD-VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP------------- 275
            L DD ++ LM++R+ D+AGC    + V LNG R+   +F  YV +Y              
Sbjct: 325  LWDDNILQLMERRLYDIAGC-NTELMVTLNGKRLNY-NFQSYVKLYEHHLNNSTNVKIMR 382

Query: 276  ---KSVTRFHERVNERWEICVTLSE-GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
               K+   F E ++ RW+I + LSE GQF QVSFVN I T+KGGTHV+++A+Q+  +V  
Sbjct: 383  HIVKNPFEFGE-ISPRWKIGIGLSETGQFTQVSFVNSINTVKGGTHVNFLADQIVRYVGE 441

Query: 332  VVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLK 391
             + KK+ +  ++  N+K+HL +FVN L+DNP+FDSQ+KETLT +   FGS  E+ E  L 
Sbjct: 442  KLKKKHSDLEIRPMNIKHHLALFVNCLVDNPSFDSQSKETLTTKPMLFGSTPEIPESLLA 501

Query: 392  KVTAKSGIVETLLSWANFKQSKDLKKNDG---TKTEDVRGISKLEDANLAGGRNSEQCTL 448
            +    S I+E +  WA  KQ  DL  +     +KT  ++ ISKL+DAN AGG  S++CTL
Sbjct: 502  QFVKNSKIIERVAGWALMKQKADLIHSTSGRQSKTTLIKSISKLDDANWAGGLKSKECTL 561

Query: 449  ILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK 508
            I+TEGDSAK+LA+AGLSVVGR+ +GVFPLRGKLLNVR+ +S Q+L+N EI N+  ILGL 
Sbjct: 562  IITEGDSAKSLALAGLSVVGRNSYGVFPLRGKLLNVRDVASKQLLSNEEINNLTTILGLS 621

Query: 509  QGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
                Y+   +++ LRYG +MIM DQ                            DHDGSHI
Sbjct: 622  HKNSYDTDESMEDLRYGRVMIMADQ----------------------------DHDGSHI 653

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNA- 624
            KGL++NFIH FWP+LLK   FLVEF+TPI+KAT  + +  SF+++ DYE W+E++  +  
Sbjct: 654  KGLVMNFIHYFWPNLLK-RGFLVEFVTPIIKATKSSTQKKSFFTIKDYEKWRETISSDQL 712

Query: 625  SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
              ++IKYYKGLGTSTS E KEYF N+  H   F+W D+ D + I++AF+K     R++W+
Sbjct: 713  KQYTIKYYKGLGTSTSAEAKEYFSNLDKHVIKFIWGDEAD-DLIKMAFAKDLSSLRQRWI 771

Query: 685  LQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRN 744
             + +    +D   K I Y DF+NKELI +S A   RSIPS++DGLKPGQRKILF SFKR 
Sbjct: 772  KETDMSQGIDHSIKEITYPDFINKELIHYSWAANLRSIPSLIDGLKPGQRKILFASFKRR 831

Query: 745  FIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGG 804
               E KV+Q SGYV+E ++YHHGEQSL STI+ MA +FVGSNN+ LL P+GQFGTR QGG
Sbjct: 832  LTNEIKVSQLSGYVAEQTSYHHGEQSLNSTIVKMAHNFVGSNNLPLLTPSGQFGTRLQGG 891

Query: 805  KDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIG 864
             D+ASARYI  +L P+    F + DD LL+YL E+G+ I+P +Y+PIIP +LVNGSEGIG
Sbjct: 892  SDSASARYIL-QLEPVGTLPFNELDDPLLNYLEEEGESIQPDYYIPIIPMLLVNGSEGIG 950

Query: 865  TGWSSYIPNYNPRDIVANVRRLLNGEM-MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGI 923
             G S+ IP ++P DI+  +   LN ++ ++ + PWYRGF GTI          TY   G+
Sbjct: 951  VGMSTSIPLFSPIDIIDQLMLRLNNQVALKKLIPWYRGFKGTISPDRH-----TYRTNGV 1005

Query: 924  IEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSE-- 981
            I+ V    L I ELPI RWT DY+E L  +ID++   I+ F++ + + +V F + L+   
Sbjct: 1006 IKLVGR-NLEITELPIGRWTSDYKEVLNDLIDKD--VIKSFQESNTENSVHFTILLNNNQ 1062

Query: 982  -ESMMRTKQEGLLKKFKLTTTISTSNMHL--FDSKGVIKKYDTPEQILEEFFHIRLEFYE 1038
             E M    +  L+K FKL+ ++   N HL  FD    I+K ++ E+I+++F+ +RL+FY 
Sbjct: 1063 LEQMEDLTENELIKLFKLSASL---NFHLTCFDENSKIQKLESVEEIIDQFYKVRLQFYG 1119

Query: 1039 KRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK---GFTPFPKN 1095
            KR++  L++L+ ++ +L   ++F+  + +G++ +  R + DL+ EL      GF  F  +
Sbjct: 1120 KRREYLLKSLDNQIKRLTTTIQFLEVIASGKLKIQGRSKQDLIKELESGEIVGFENFGTH 1179

Query: 1096 SKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLN 1155
                                 PEV        Y +L S++I  +T E++  L     K  
Sbjct: 1180 P--------------------PEV--------YQHLFSLSILDITKERIDNLTNQLTKRK 1211

Query: 1156 EEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
             E   +  + P+SLW  DL  L   L++ DK
Sbjct: 1212 SEHQSISSSDPKSLWTADLQQLKEYLEKSDK 1242


>gi|448932485|gb|AGE56044.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
            MO0605SPH]
          Length = 1058

 Score =  965 bits (2494), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/1153 (46%), Positives = 739/1153 (64%), Gaps = 103/1153 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ +H+L RPDTY+GS+ K  +  ++Y  ++  ++ +++SY P   KIFDEIL N+
Sbjct: 5    YIKLSQRDHVLQRPDTYVGSVAKEAREEYVYTGDA--IVKKSVSYSPAFLKIFDEILTNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV ID +H  ++++N G  +PVE H EEG YVPELIFGHLLT  N+D
Sbjct: 63   ADCFNRGAPMTTLKVTIDTDH--VTIYNDGCSIPVEKH-EEGCYVPELIFGHLLTGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS +F +E  DG R  KY Q +++NM   S+P ++K  + 
Sbjct: 120  DAQERTGAGRNGYGSKLTNIFSKKFDVEIYDGTR--KYLQTWSDNMTNASKPKVTKSSKP 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  +F PD  +F+M  +++D  +++ +RV D+A  L K VK+ L+G R+ VK   +Y
Sbjct: 178  GSIT-TTFYPDFERFSMVSIDEDTRSVLVRRVYDMAAVLTK-VKIFLDGKRLDVKGAKDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
             +MY ++   F     + W+I V  S+ +F+ VSFVN  +T +GGTHVD +AN VA  V 
Sbjct: 236  FEMYTEAKPVFESV--DGWDIGVCPSD-EFRSVSFVNASST-RGGTHVDLIANAVAKAVA 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
                   K   VK   VKN L++FVNA + NP+F SQTK+ LT    S   KC  S  FL
Sbjct: 292  E--AALKKKVTVKPAVVKNKLFIFVNARVVNPSFSSQTKDILT----SKNVKCSPSVAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK  A S +++ +++  N ++S    K+LKK DG K   + GI KL DA  AG ++S  C
Sbjct: 346  KK--AVSAVLDDVIAETNVRESLVEMKNLKKTDGAKKVRLTGIKKLTDAAWAGTKHSGMC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + + NN+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSITNNAEITAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ GV Y +  SLRYG +MIM+DQ                            D DGSHI 
Sbjct: 464  LRNGVNYKDASSLRYGSVMIMSDQ----------------------------DVDGSHIA 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
            GL++NF H+ +PSLL+IP FL  F+TPIV A  K  K++ FYS+PD+E WK +   + S+
Sbjct: 496  GLVLNFFHAQFPSLLEIPGFLKRFVTPIVVA-KKGTKMVEFYSIPDFEEWKAATP-DVST 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            W  KYYKGLGTS S + K YF N+ +  K   W DD   E+I+ +F+K + + RK WLL 
Sbjct: 554  WKTKYYKGLGTSDSNDAKRYFNNLKVLVKTLTWSDDA-AESIDKSFNKSRADERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQK   I   DF+NK+LILFS  D++RSIPS+VDGLKP QRKILF +F+RN  
Sbjct: 613  FKPGNQLDQKLTKIPVEDFINKDLILFSRYDVERSIPSVVDGLKPSQRKILFSAFRRNLT 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQFSGYVSEH+ YHHGE SL   I+GMAQD+VGSNNINLL P GQFG+R  GGKD
Sbjct: 673  SEIKVAQFSGYVSEHAGYHHGEASLQGAIVGMAQDYVGSNNINLLAPKGQFGSRLHGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            +ASARYIFT+LSP TR +F K D++LL+YL EDG +IEP +Y+P IP +LVNG+ GIGTG
Sbjct: 733  SASARYIFTQLSPNTRDIFHKADERLLNYLEEDGDKIEPEYYVPTIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNP+DIV NV+RL+N E M PM PWYRGF GTI + +    GV +T +G+  +
Sbjct: 793  FSTNIPSYNPKDIVDNVKRLINNETMLPMTPWYRGFKGTIVEAS---PGV-FTCSGVY-D 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            +   T+ + ELP+  WT +Y+E LE++I++    +  FR+  D+  V+FE+  + +    
Sbjct: 848  IKGKTVTVSELPVGTWTNEYKEHLETLIEKK--IVADFREKHDEKNVNFEIMFTNDVDP- 904

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                   K  KL +TI T+NMH FD  G IKKYD+P  I+ ++F  R EFY KRK+  L+
Sbjct: 905  -------KILKLESTIRTTNMHAFDPSGKIKKYDSPLDIIADWFATRKEFYVKRKEDMLK 957

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L+  +L  +NK RFI  V +G +V+  R   D++ +L++  F                 
Sbjct: 958  DLKSRVLVAQNKSRFINSVNDGSLVITRRAEEDVVKDLKKMKF----------------- 1000

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
                       + V+G     ++YLL M I +LT E+ + L A+   L E++  L+  T 
Sbjct: 1001 -----------DKVDG----SFEYLLGMKISSLTKERAEKLQAEAAALEEDLVVLQNTTT 1045

Query: 1167 ESLWVKDLDALDM 1179
            E++WV D+DA+ M
Sbjct: 1046 ETMWVNDIDAIKM 1058


>gi|444714020|gb|ELW54908.1| DNA topoisomerase 2-alpha [Tupaia chinensis]
          Length = 1392

 Score =  962 bits (2487), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/1171 (45%), Positives = 731/1171 (62%), Gaps = 127/1171 (10%)

Query: 56   QALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLIS 115
            Q +W+Y+E+   + +R +++VPGL+     +  N   NK +  +    ++ I        
Sbjct: 7    QQMWVYDEDV-GLNYREVTFVPGLWSPLQPVNENMQINKIKKNEDAKKRLSI-------- 57

Query: 116  VHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEF 175
                           E +Y  +    H+L   +                   T I S E 
Sbjct: 58   ---------------ERIYQKKTQLEHILLRPD-------------------TYIGSVEL 83

Query: 176  IIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVV 235
            + +  D             NMG+  E  + K   G+++T ++F+PDL+KF M  L+ D+V
Sbjct: 84   VTQWMD-------------NMGRAGEMEL-KPFNGEDYTCITFQPDLSKFKMQSLDKDIV 129

Query: 236  ALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNE 287
            ALM +R  D+AG   K VKV LNG+++PVK F  YVDMY K         +   HE+VN 
Sbjct: 130  ALMVRRAYDIAGST-KDVKVFLNGNKLPVKGFRSYVDMYLKDKLDETGNPLKVIHEQVNH 188

Query: 288  RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHN 346
            RWE+C+T+SE  FQQ+SFVN IAT KGG HVDYVA+Q+   ++ VV KKNK    VKAH 
Sbjct: 189  RWEVCLTMSEKGFQQISFVNSIATSKGGRHVDYVADQIVTKLVDVVKKKNKGGVAVKAHQ 248

Query: 347  VKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSW 406
            VKNH+W+FVNALI+NP FDSQTKE +TL+  SFGS C+LSE+F+K      GIVE++L+W
Sbjct: 249  VKNHMWIFVNALIENPTFDSQTKENMTLQAKSFGSTCQLSEKFIKAAIG-CGIVESILNW 307

Query: 407  ANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLS 465
              FK    L KK    K   ++GI KL+DAN AGGR+S +CTLILTEGDSAK LA++GL 
Sbjct: 308  VKFKAQVQLNKKCSAVKHNRIKGIPKLDDANDAGGRSSAECTLILTEGDSAKTLAVSGLG 367

Query: 466  VVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYG 522
            VVGRD++GVFPLRGK+LNVREAS  Q++ N+EI NI KI+GL+    Y   +++K+LRYG
Sbjct: 368  VVGRDKYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYEDEDSLKTLRYG 427

Query: 523  HLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK 582
             +MIMTDQ                            D DGSHIKGLLINFIH  WPSLL+
Sbjct: 428  KIMIMTDQ----------------------------DQDGSHIKGLLINFIHHNWPSLLR 459

Query: 583  IPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKE 642
               FL EFITPIVK + KN + ++FYS+P++E WK S   N   W +KYYKGLGTSTSKE
Sbjct: 460  -HRFLEEFITPIVKVS-KNKQEIAFYSLPEFEEWKSSTP-NHKKWKVKYYKGLGTSTSKE 516

Query: 643  GKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGN 691
             KEYF ++  H+  F +   +D  AI LAFSKK+I+ RK+WL  F            P +
Sbjct: 517  AKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQRKLLGLPED 576

Query: 692  HL-DQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAK 750
            +L  Q   Y+ Y+DF+NKELILFS +D +RSIPSMVDGLKPGQRK+LF  FKRN  +E K
Sbjct: 577  YLYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCFKRNDKREVK 636

Query: 751  VAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASA 810
            VAQ +G V+E S+YHHGE SL  TI+ +AQ+FVGSNN+NLLQP GQFGTR  GGKD+AS 
Sbjct: 637  VAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRLHGGKDSASP 696

Query: 811  RYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSY 870
            RYIFT LSP+ R LFP  DD  L +L +D Q++EP WY+PIIP VLVNG+EGIGTGWS  
Sbjct: 697  RYIFTMLSPLARLLFPPKDDHTLKFLYDDNQRVEPEWYIPIIPMVLVNGAEGIGTGWSCK 756

Query: 871  IPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNET 930
            IPN++ R++V N+RRL++GE + PM P Y+ F GTIE+ A  +    Y ++G +  +N T
Sbjct: 757  IPNFDVREVVNNIRRLMDGEELLPMLPSYKNFKGTIEELAPNQ----YVISGEVAILNST 812

Query: 931  TLRIKELPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            T+ I ELPIR WTQ Y+E  LE ++   ++    I  +++Y  DTTV F V ++EE +  
Sbjct: 813  TIEISELPIRTWTQTYKEQVLEPMLNGTEKTPPLITDYKEYHTDTTVKFVVKMTEEKLAE 872

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
             ++ GL K FKL T+++ ++M LFD  G +KKYDT   IL +FF +RL++Y  RK+  L 
Sbjct: 873  AERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTVLDILRDFFELRLKYYGLRKEWLLG 932

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNS--KSIEAVVA 1104
             L  E  KL N+ RFIL  ++G+I++ N+ + +L+  L Q+G+   P  +  ++ + V  
Sbjct: 933  MLGAESAKLNNQARFILEKIDGKIIIENKPKKELIKVLIQRGYDSDPVKAWKEAQQKVPD 992

Query: 1105 GATDETEESEENPEVVNGV--QSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
               +E  ++E+  E  + V      ++YLL M +  LT EK   L   R++  +E+D L+
Sbjct: 993  EEENEESDNEKETEKTDSVTDSGPTFNYLLDMPLWYLTKEKKDELCKLRNEKEQELDTLK 1052

Query: 1163 KATPESLWVKDLDALDMQLDELDKSDARAEE 1193
            + +P  LW +DL A   +L+ ++  + + E+
Sbjct: 1053 RKSPSDLWKEDLAAFIEELEAVEAKEKQDEQ 1083



 Score = 54.7 bits (130), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/33 (72%), Positives = 29/33 (87%)

Query: 26 TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQAL 58
          +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +
Sbjct: 56 SIERIYQKKTQLEHILLRPDTYIGSVELVTQWM 88


>gi|301120494|ref|XP_002907974.1| DNA topoisomerase 2 DNA gyrase B [Phytophthora infestans T30-4]
 gi|262103005|gb|EEY61057.1| DNA topoisomerase 2 DNA gyrase B [Phytophthora infestans T30-4]
          Length = 1329

 Score =  962 bits (2487), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 522/1193 (43%), Positives = 720/1193 (60%), Gaps = 107/1193 (8%)

Query: 62   EEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQ------EHDLIS 115
            E E   M  + + YVP LYKIFDEI+VNA DNK RDP M  + V+I+           IS
Sbjct: 11   EGEDLKMKQQAVEYVPALYKIFDEIIVNAVDNKVRDPSMRHLDVIIEPGSKANGYRPWIS 70

Query: 116  VHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEF 175
            V+N G G+PV+ H+ E VYVPEL+ GHLLT SN+DD   + TGGR+GYGAKLTNIFS EF
Sbjct: 71   VYNDGKGIPVKFHKTEKVYVPELVLGHLLTGSNFDDTAARLTGGRHGYGAKLTNIFSKEF 130

Query: 176  IIETADGKRLKKYKQVFTNNMGKKSEPNISKC--KEGDNWTKVSFKPDLAKFNMTHLEDD 233
            ++ET D     +YKQV+ NNM  + EP I++   K+  ++TKVSF PDL KF M  L   
Sbjct: 131  VVETGDTSMGLRYKQVWHNNMRTRGEPEITEFSGKDAKDFTKVSFSPDLEKFEMEKLTAS 190

Query: 234  VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR------------- 280
            +  ++KKRV D+AGCL   V+V LNG ++P+  F  Y+  +  S T              
Sbjct: 191  MTRVLKKRVYDVAGCL-SDVQVTLNGKKLPISGFESYIKTFRYSTTNNPVSKTAKPSKDS 249

Query: 281  ----------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
                       + RVN+RW+I V  S+  F QVSFVNG++ ++GG+HV YV++Q+   V 
Sbjct: 250  DDAASSGSDYIYSRVNKRWKIGVLPSDVGFVQVSFVNGMSALRGGSHVGYVSDQICRRVA 309

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
              VNKK    +V    VK H+ +F+N  I+NP FDSQ KE +T R  +FGS C LSE  L
Sbjct: 310  EHVNKKFPELSVSTAQVKPHMAIFINCQIENPTFDSQMKEFMTSRPPTFGSTCVLSERLL 369

Query: 391  KKVTAKSGIVETLLSWANFKQ-SKDLKKNDGTKTEDVR-GISKLEDANLAGGRNSEQCTL 448
            K V + SGIVE ++  A  +Q +  LKK   T+ +     + KLEDANLAGG  S +C+L
Sbjct: 370  KLVLSDSGIVERVVQSARARQRAALLKKVSSTRAKSSSVNVPKLEDANLAGGARSSECSL 429

Query: 449  ILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK 508
            ILTEGDSAKALA+AGL+VVGRD++GVFPLRGKLLNVR+A+  Q+  N+E  ++  ILGL+
Sbjct: 430  ILTEGDSAKALAVAGLAVVGRDQYGVFPLRGKLLNVRDATVAQLGKNAEFAHLCTILGLR 489

Query: 509  QGVEYNNVKS---LRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
                Y   ++   LRYG ++ MTDQ                            DHDGSHI
Sbjct: 490  MDEHYGTEEARQKLRYGRVIAMTDQ----------------------------DHDGSHI 521

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS--------FYSMPDYEAWK 617
            KGLL N  H+FWP LLK   F+ EFITPI+K +  + +V +        F+S+P+Y  WK
Sbjct: 522  KGLLFNLFHTFWPELLKEGGFISEFITPIIKVSPTSKRVGTERGLETRRFFSLPEYFEWK 581

Query: 618  ESL-GGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKK 676
             S+   +   + IKYYKGLGTSTS EG+EYF ++  H  DF W  D DG+A+++ FSK +
Sbjct: 582  ASIDSADLKHYVIKYYKGLGTSTSAEGREYFSDLDNHLVDFHWSGDNDGDALDMVFSKAR 641

Query: 677  IEARKKWLL-QFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRK 735
               RK WLL ++ P ++LD     + Y DFVN+ELI FS AD QRS+PS+VDGLK  QRK
Sbjct: 642  AADRKAWLLNEYSPASYLDTSSGSVTYQDFVNRELIQFSHADNQRSLPSVVDGLKISQRK 701

Query: 736  ILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNG 795
            +LF   KR    E KVAQ +GY SEH+AYHHGE SL STI+ MAQDFVGS N+ LL P+G
Sbjct: 702  VLFACMKRKLTSEVKVAQLAGYCSEHTAYHHGEASLHSTIVNMAQDFVGSKNLPLLFPSG 761

Query: 796  QFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTV 855
            QFGTR QGGKDAAS RYIFT L   TR +FP++DD LL Y ++DG  +EP +Y+PIIP +
Sbjct: 762  QFGTRLQGGKDAASPRYIFTLLQKHTRLVFPEEDDALLRYADDDGFPVEPVFYVPIIPML 821

Query: 856  LVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE---------MMEPMHPWYRGFGGTI 906
            LVNG+EGIGTGWSS IP ++P  ++ N+ +LL+ E          +  M PW +GF G I
Sbjct: 822  LVNGAEGIGTGWSSSIPCHHPVLVIDNLLKLLDAEEAGDDLSIVELSLMTPWAKGFSGDI 881

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQ 966
             +T       ++   G +E+VN +T+R+ ELP+ +W +DY++FL  ++ +    IR F +
Sbjct: 882  RQTGKH----SFVSRGNVEQVNTSTVRVTELPVGKWVEDYKKFLWDLVGKKA--IRSFSE 935

Query: 967  YSDDTTVDFEVFLSEESMMRTKQ-----------EGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +  +  V F++ ++   + +  +           E L+K  +L   +STSNMH F++ G 
Sbjct: 936  HHSERDVRFDISMTRSDLAKYAEDAAENCDAGDSEALVKLLRLEAPLSTSNMHAFNADGQ 995

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
            + KY+T E +L +F+ +R + Y KRK+   +    E+L+L N++RFI  V  G +    R
Sbjct: 996  LVKYETSEDVLRDFYGVRRKLYSKRKRHLEQRQTKEVLRLSNRIRFIQEVSTGSLQKILR 1055

Query: 1076 KR---TDLLLELRQKGFTPFPKNSKSIEAV-VAGATDETEESEENPEVVNGVQSIDYDYL 1131
            +R    +L+  L++ GF   P ++   EA+   G         E  +  +   S DYDYL
Sbjct: 1056 ERIPKAELIDLLKEHGFA--PASAFKEEAIDHMGDLGLAAVGREQGKAGDLDGSEDYDYL 1113

Query: 1132 LSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL 1184
            L+ ++ + T E    L  + D   +++  L+  TP  LW  +L+ L   L   
Sbjct: 1114 LNTSLMSFTKEFADRLRKEHDTKQDKLQQLQATTPAQLWRNELERLRAVLSHF 1166


>gi|157953085|ref|YP_001497977.1| hypothetical protein NY2A_B781L [Paramecium bursaria Chlorella virus
            NY2A]
 gi|155123312|gb|ABT15180.1| hypothetical protein NY2A_B781L [Paramecium bursaria Chlorella virus
            NY2A]
          Length = 1061

 Score =  961 bits (2483), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/1155 (45%), Positives = 718/1155 (62%), Gaps = 106/1155 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK SQ +H+L RPDTYIGS    T+  W+Y   +  +I + ++Y   L KIFDEI+ N+
Sbjct: 5    YQKLSQRDHVLARPDTYIGSTAPQTKNEWVYV--NGKVIKKDVTYSSALLKIFDEIITNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   RD ++  +K+ ID+    +SV N G  +P+E H  E  Y+PELIFGHLL   N+D
Sbjct: 63   ADCYNRDKRLTILKICIDETS--VSVFNDGCSIPIEKHDVEKCYIPELIFGHLLAGENFD 120

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNG G+K TNIFS  F +E  DG   KKYKQ + +NM   S+P ++ C + 
Sbjct: 121  DTEQRTGAGRNGIGSKATNIFSKIFDVEICDGN--KKYKQTWRDNMSVVSKPKVTTCSK- 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            + +   +F PD  +F +   +DD++++M++RV D+A  LGK VKV LNG R+ +K+  +Y
Sbjct: 178  NPYITTTFFPDFERFGVDTFDDDILSVMRRRVYDMAAVLGK-VKVMLNGKRLEIKNTEDY 236

Query: 271  VDMYPKS---VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVAN 327
              +Y  S     R  E   E W++ V   E  F  VSFVN + T +GGTHV+ V++ V  
Sbjct: 237  FSLYIGSKSETKRAFEHTPEEWDVGVACVE-DFTPVSFVNSVVT-RGGTHVNAVSDVVVK 294

Query: 328  HVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE 387
             V+    KK     VK   VKN ++VFVNA I NP FDSQTKE LT R +    +  LSE
Sbjct: 295  AVIEAAAKKK--IIVKPSTVKNRMFVFVNATIVNPTFDSQTKEILTSRNA----RVTLSE 348

Query: 388  EFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
             FLKK  A   +++ ++   N + S    K+LKK DGTK   V GI KL DA  AG  NS
Sbjct: 349  AFLKK--AVGVLLDVVIQETNVRTSLVDQKELKKTDGTKKIRVTGIPKLNDATWAGTNNS 406

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSA  LA+AGLSVVGR+R+GVFPLRGKLLNVR+AS   +  N EI  +K+
Sbjct: 407  KMCTLILTEGDSAATLAIAGLSVVGRERYGVFPLRGKLLNVRDASVASITKNEEITALKQ 466

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+ G  Y +  SLRYGH+MIMTD                             D DG+
Sbjct: 467  ILGLQTGKVYKDTSSLRYGHVMIMTDA----------------------------DVDGT 498

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
            HI GL++NF HS +P+LL+IP FL +FITPIV A  K  +V  F+S+PD+E + ++   +
Sbjct: 499  HISGLVMNFFHSCFPNLLEIPGFLKKFITPIVVA-RKGKEVREFFSLPDFEDFVKT--QD 555

Query: 624  ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
               W+ KY+KGLGTS+S + K+YF N+    K F+W  D  GE I+ +F+K + E RK+W
Sbjct: 556  MKKWTTKYFKGLGTSSSADAKKYFSNLKSLMKTFMWTSDS-GELIDRSFNKSRAEDRKEW 614

Query: 684  LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
            +  +EPGN LD K+  +   DF++KELILFS  DL+RSIPS+VDG KP QRK+++ +FKR
Sbjct: 615  MTAYEPGNQLDHKKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVIYSAFKR 674

Query: 744  NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
            N   + KVAQFSGYV+EHSAYHHGE SL  TI+ +AQD+VGSNNIN L P GQFG+R QG
Sbjct: 675  NLTTDVKVAQFSGYVAEHSAYHHGEASLQGTIVNLAQDYVGSNNINWLLPEGQFGSRLQG 734

Query: 804  GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
            GKD ASARYI+ +L+P TR +F   DD LL Y+ +DG +IEP +Y+P+IP++LVNGS GI
Sbjct: 735  GKDHASARYIYMKLNPQTRQVFVDTDDNLLKYMYDDGDKIEPEYYVPVIPSILVNGSSGI 794

Query: 864  GTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGI 923
            GTGWS+ IP+YNP+DIV NV+RL++GE +  M PWY+GF G I +T+    GV Y   G+
Sbjct: 795  GTGWSTNIPSYNPKDIVDNVKRLISGEDLVEMKPWYKGFKGKIMETS---PGV-YVTKGL 850

Query: 924  IEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV-FLSEE 982
                N  T+ + ELPI +WTQDY+E L+ ++++    I  FR+   DT V FE+ F+   
Sbjct: 851  YMP-NGKTIVVSELPIGKWTQDYKEHLDGLLEKK--IISDFREKHSDTDVLFEIDFVGNP 907

Query: 983  SMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKK 1042
            +         +   KL TTI ++NMH FD  G IKKYDTP  I+ E+F +R + Y KRK 
Sbjct: 908  N---------IDILKLETTIRSTNMHAFDPSGKIKKYDTPLDIIREWFGVRKDLYVKRKA 958

Query: 1043 VQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAV 1102
              LE+L       +NK RFI  V N EI++N +  + +  EL +  F  +  + K     
Sbjct: 959  YLLEDLTHRTNIAQNKHRFITMVNNDEIIINKKHESVISAELEKLKF--YKVDDK----- 1011

Query: 1103 VAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
                                     YDYLL+M I +LTLE+ + L  +  KL +E+DDL 
Sbjct: 1012 -------------------------YDYLLNMRISSLTLERAEELKRESVKLEKELDDLS 1046

Query: 1163 KATPESLWVKDLDAL 1177
            K T   +W+ DL +L
Sbjct: 1047 KTTETDMWMHDLQSL 1061


>gi|448933153|gb|AGE56710.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus NE-JV-2]
          Length = 1058

 Score =  960 bits (2481), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/1153 (46%), Positives = 739/1153 (64%), Gaps = 103/1153 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ +H+L RPDTY+GS+ K  +  ++Y  ++  ++ +++SY P   KIFDEIL N+
Sbjct: 5    YVKLSQRDHVLQRPDTYVGSVAKEAREEYVYTGDA--IVKKSVSYSPAFLKIFDEILTNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV ID +H  ++++N G  +PVE H EEG YVPELIFGHLLT  N+D
Sbjct: 63   ADCFNRGAPMTTLKVTIDTDH--VTIYNDGCSIPVEKH-EEGCYVPELIFGHLLTGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS +F +E  DG R  KY Q +++NM   S+P ++K  + 
Sbjct: 120  DAQERTGAGRNGYGSKLTNIFSKKFDVEIYDGTR--KYLQTWSDNMTNASKPKVTKSSKP 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  +F PD  +F+M+ +++D  +++ +RV D+A  L K VK+ L+G R+ VK   +Y
Sbjct: 178  GSIT-TTFYPDFERFSMSSIDEDTRSVLVRRVYDMAAVLTK-VKIFLDGKRLDVKGAKDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
             +MY   V    E V+E W+I V  S+ +F+ VSFVN  +T +GGTHVD +AN VA  V 
Sbjct: 236  FEMY-TDVKPVFESVDE-WDIGVCPSD-EFRSVSFVNASST-RGGTHVDLIANAVAKAVA 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
                   K   VK   VKN L++FVNA + NP+F SQTK+ LT    S   KC  S  FL
Sbjct: 292  E--AALKKKVTVKPAVVKNKLFIFVNARVVNPSFSSQTKDILT----SKNVKCSPSAAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK  A S +++ +++  N ++S    K+LKK DG K   + GI KL DA  AG ++S  C
Sbjct: 346  KK--AVSAVLDDVIAETNVRESLVEMKNLKKTDGAKKVRLTGIKKLTDAAWAGTKHSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGRDR+G+FPLRGKLLNVR+AS + + NN+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRDRYGIFPLRGKLLNVRDASVSSITNNAEITAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +MIM+DQ                            D DGSHI 
Sbjct: 464  LRNGTTYKDASSLRYGSVMIMSDQ----------------------------DVDGSHIA 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
            GL++NF H+ +PSLL+IP FL  F+TPIV A  K  K++ FYS+PD+E WK +   + S+
Sbjct: 496  GLVLNFFHAQFPSLLEIPGFLKRFVTPIVVA-KKGTKMVEFYSIPDFEEWKAATP-DVST 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            W  KYYKGLGTS S + K YF N+ +  K   W DD   E+I+ +F+K + + RK WLL 
Sbjct: 554  WKTKYYKGLGTSDSNDAKRYFNNLKVLVKTLTWSDDA-AESIDKSFNKSRADERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQK   I   DF+NK+LILFS  D++RSIPS+VDGLKP QRKILF +F+RN +
Sbjct: 613  FKPGNQLDQKLTKIPVEDFINKDLILFSRYDVERSIPSVVDGLKPSQRKILFSAFRRNLV 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
            +E KVAQF+GYVSEH+ YHHGE SL   I+ MAQD+VGSNNINLL P GQFG+R  GGKD
Sbjct: 673  QEIKVAQFAGYVSEHAGYHHGEASLQGAIVSMAQDYVGSNNINLLVPKGQFGSRLHGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            +ASARYIFT+LSP TR +F K D++LL+YL +DG +IEP +Y+P +P +LVNG+ GIGTG
Sbjct: 733  SASARYIFTQLSPNTRDIFHKADERLLNYLEDDGDKIEPEYYVPTVPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNP+DIV NV+RL+NG+ M  M PWY+ F G I++T+    GV +T +G+  +
Sbjct: 793  FSTNIPSYNPKDIVDNVKRLINGKAMTEMTPWYKNFKGEIKETS---PGV-FTCSGVY-D 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            +   T+ + ELP+  WT +Y+E LE++I++    +  FR+  D+T V FE+  + +    
Sbjct: 848  IKGKTVTVSELPVGTWTNEYKEHLETLIEKK--IVADFREKHDETNVHFEISFTNDVDP- 904

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                   K  KL +TI T+NMH FD  G IKKYD+P  I+ ++F  R EFY KRK+  L+
Sbjct: 905  -------KILKLESTIRTTNMHAFDPAGKIKKYDSPLDIITDWFSTRKEFYIKRKEDLLK 957

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L+  +L  +NK RFI  V +G +++  R   D++ +L   G   F K  KS        
Sbjct: 958  DLKARVLVAQNKSRFITSVNDGTLIITRRAEEDVIKDL---GKLKFDKVDKS-------- 1006

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
                                 +DYLLSM I +LT E+ + L A+   L E++  L+  T 
Sbjct: 1007 ---------------------FDYLLSMKISSLTKERAEKLQAEATALEEDLVVLQNTTT 1045

Query: 1167 ESLWVKDLDALDM 1179
            E +WV D+DA+ +
Sbjct: 1046 EQMWVSDIDAIKL 1058


>gi|448924953|gb|AGE48534.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus AN69C]
 gi|448933895|gb|AGE57450.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus NE-JV-4]
          Length = 1064

 Score =  958 bits (2476), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 548/1157 (47%), Positives = 728/1157 (62%), Gaps = 107/1157 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK +Q EH+L RPDTYIGS+   T+  W+Y +    +I + ++Y P L KIFDEI+ N+
Sbjct: 4    YQKLTQREHVLARPDTYIGSVAPQTKNEWVYVDGK--IIRKDVTYPPALLKIFDEIITNS 61

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   RD K+  +KV ID++   +SVHN G  +P+E H  E  Y+PELIFGHLL   N+D
Sbjct: 62   ADCYNRDKKLTVLKVCIDEKS--VSVHNDGCNIPIEKHDAEKCYIPELIFGHLLAGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ ++T  GRNG G+K TNIFS +F +E  DGK  KKYKQ + NNM   S+P ++ C + 
Sbjct: 120  DSEQRTGAGRNGIGSKATNIFSKKFDVEICDGK--KKYKQSWENNMSVMSKPKVTTCSK- 176

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            D++   +F PD  +F +   +DD +++M +RV D+A  L K VKV LNG R+ +K+  +Y
Sbjct: 177  DSYITTTFFPDFERFGIESFDDDTMSIMVRRVYDMAAVLNK-VKVMLNGKRLEIKNTEDY 235

Query: 271  VDMYPKSVT---RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVAN 327
              +Y  + T   R  E   E W++ V+ S+ +F  VSFVN + T +GGTHV+ V + VA 
Sbjct: 236  FSLYVGNKTETKRAFEHTPENWDVAVSCSD-EFTPVSFVNSVVT-RGGTHVNAVTDAVAK 293

Query: 328  HVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE 387
             V+       K   VK   VK  ++VFVNA++ NP FDSQTKE LT R +    +  LS+
Sbjct: 294  AVVE--AAAKKKIVVKPATVKGRMFVFVNAVVVNPNFDSQTKENLTSRNA----RVTLSD 347

Query: 388  EFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
             F+KK  A   +++ ++   N + S    K+LKK DG K   V GI KL DA  AG +NS
Sbjct: 348  TFVKK--AIGVLLDAVIQETNVRTSLVDQKELKKTDGAKKSRVSGIPKLNDAAWAGTKNS 405

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + CTLILTEGDSA  LA+AGLSVVGR+R+GVFPLRGKLLNVR+AS   +  N EI  +K+
Sbjct: 406  KMCTLILTEGDSAATLAIAGLSVVGRERYGVFPLRGKLLNVRDASVASITKNEEITALKQ 465

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+ G  Y +  SLRYGH+MIMTD                             D DG+
Sbjct: 466  ILGLQTGKVYKDTSSLRYGHVMIMTDA----------------------------DVDGT 497

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSMPDYEAWKESLGG 622
            HI GL++NF HS +PSLL+IP FL +FITPIV A  K GK V  FYS+PDYE W ++   
Sbjct: 498  HISGLVMNFFHSCFPSLLEIPGFLKKFITPIVVA--KKGKDVREFYSLPDYEDWVKTTK- 554

Query: 623  NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
            + S + IKYYKGLGTS+S + K YF N+    K F W  D  GE I+ +F+K + E RK+
Sbjct: 555  DYSKYQIKYYKGLGTSSSTDAKHYFSNLKSLMKTFTWTSDS-GELIDRSFNKTRAEDRKE 613

Query: 683  WLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
            W+  +EPGN LD K+  +   DF++KELILFS  DL+RSIPS+VDG KP QRK+L+ +FK
Sbjct: 614  WMTAYEPGNQLDHKKPEVPVPDFIDKELILFSRYDLERSIPSVVDGFKPSQRKVLYSAFK 673

Query: 743  RNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQ 802
            RN   + KVAQFSGYV+EHSAYHHGE SL  TI+ +AQD+VGSNNIN L P GQFG+R Q
Sbjct: 674  RNLTTDVKVAQFSGYVAEHSAYHHGEVSLQGTIVNLAQDYVGSNNINWLLPEGQFGSRLQ 733

Query: 803  GGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEG 862
            GGKD ASARYIFT+L+P TR +F   DD LL YL +DG +IEP +Y+PIIP++LVNGS G
Sbjct: 734  GGKDHASARYIFTKLNPKTRQVFVDTDDNLLKYLYDDGDKIEPEYYVPIIPSILVNGSSG 793

Query: 863  IGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTG 922
            IGTGWS+ IP+YNP+DIV NV+RL++GE +  M PWYRGF G IE+T     GV Y   G
Sbjct: 794  IGTGWSTNIPSYNPKDIVDNVKRLISGEDLVEMKPWYRGFKGKIEETF---PGV-YVTKG 849

Query: 923  IIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV-FLSE 981
            +     +T + + ELP+ +WTQDY+E+L+ ++++    I  FR+   DT V FE+ F+  
Sbjct: 850  LYMPKGKTIV-VSELPVGKWTQDYKEYLDGLLEK--KVISDFREKHSDTDVLFEIDFVGN 906

Query: 982  ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
             +         +   KL TTI ++NMH FD  G IKKYDTP  I+ ++F +R   Y KRK
Sbjct: 907  PN---------IDILKLETTIRSTNMHAFDPSGKIKKYDTPLDIIRDWFEVRRNLYVKRK 957

Query: 1042 KVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA 1101
               LE+L       +NK RFI  V N EIV+N +  + +  EL +  F            
Sbjct: 958  AYLLEDLTHRTNIAQNKHRFITMVNNDEIVINKKHESVISAELEKLNFYK---------- 1007

Query: 1102 VVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
                              V+G     YDYLL+M I +LTLE+   L  +  KLN+E+DDL
Sbjct: 1008 ------------------VDG----KYDYLLNMRISSLTLERATELEREAVKLNKELDDL 1045

Query: 1162 RKATPESLWVKDLDALD 1178
             K T   +W +DL +LD
Sbjct: 1046 SKTTETDMWKQDLTSLD 1062


>gi|339810|gb|AAA61210.1| topoisomerase II, partial [Homo sapiens]
          Length = 886

 Score =  955 bits (2469), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 500/923 (54%), Positives = 637/923 (69%), Gaps = 69/923 (7%)

Query: 128  HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
            H+ E VYVP LIFG LLTSSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    
Sbjct: 3    HKVEKVYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHS 62

Query: 188  YKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
            +KQ + NNM K SE  I K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG
Sbjct: 63   FKQTWMNNMMKTSEAKI-KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAG 121

Query: 248  -CLGKSVKVELNGHRVPVKSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEG 298
             C G  VKV  NG ++PV  F  YVD+Y K        ++   HE  NERW++C+TLSE 
Sbjct: 122  SCRG--VKVMFNGKKLPVNGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEK 179

Query: 299  QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNA 357
             FQQ+SFVN IAT KGG HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N 
Sbjct: 180  GFQQISFVNSIATTKGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINC 239

Query: 358  LIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-K 416
            LI+NP FDSQTKE +TL+  SFGSKC+LSE+F K   +  GIVE++L+W  FK    L K
Sbjct: 240  LIENPTFDSQTKENMTLQPKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNK 298

Query: 417  KNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFP 476
            K    K   ++GI KL+DAN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFP
Sbjct: 299  KCSSVKYSKIKGIPKLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFP 358

Query: 477  LRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLL 533
            LRGK+LNVREAS  Q++ N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ   
Sbjct: 359  LRGKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ--- 415

Query: 534  APLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITP 593
                                     D DGSHIKGLLINFIH  WPSLLK   FL EFITP
Sbjct: 416  -------------------------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITP 449

Query: 594  IVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLH 653
            IVKA+ KN + LSFYS+P+++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H
Sbjct: 450  IVKAS-KNKQELSFYSIPEFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERH 507

Query: 654  KKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIK 701
            +  F +   +D  AI LAFSKKKI+ RK+WL  F            P   L     K++ 
Sbjct: 508  RILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLT 567

Query: 702  YSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEH 761
            Y+DF+NKELILFS +D +RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E 
Sbjct: 568  YNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEM 627

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
            SAYHHGEQ+L  TI+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + 
Sbjct: 628  SAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLA 687

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            R LFP  DD LL +L +D Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV 
Sbjct: 688  RLLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVN 747

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
            NVRR+L+G    PM P Y+ F GTI++    +    Y V+G I  V+  T+ I ELP+R 
Sbjct: 748  NVRRMLDGLDPHPMLPNYKNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRT 803

Query: 942  WTQDYRE-FLESIIDQND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFK 997
            WTQ Y+E  LE +++  D   + I  +++Y  DTTV F V ++EE + + +  GL K FK
Sbjct: 804  WTQVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFK 863

Query: 998  LTTTISTSNMHLFDSKGVIKKYD 1020
            L TT++ ++M LFD  G +KKY+
Sbjct: 864  LQTTLTCNSMVLFDHMGCLKKYE 886


>gi|448932811|gb|AGE56369.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus NE-JV-1]
          Length = 1057

 Score =  952 bits (2461), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/1151 (46%), Positives = 723/1151 (62%), Gaps = 103/1151 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K +Q +H+L RPDTYIGS++K  +  +++ +    ++ + ++Y PG  KIFDEILVN+
Sbjct: 5    YVKLTQRDHVLKRPDTYIGSVDKEVKNEYVFSDSK--IVRKDVTYSPGFLKIFDEILVNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R+  M  +KV I ++H  ISV N G  +P+E H E G YVPELIFGHLL+  N+D
Sbjct: 63   ADCFNRESPMTTLKVTIAKDH--ISVFNDGSSIPIEKHSE-GCYVPELIFGHLLSGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D+ ++T  GRNGYG+KLTNIFS  F +E  DGK   +Y Q +T+NM   S P I+K  + 
Sbjct: 120  DSEERTGAGRNGYGSKLTNIFSKIFGVEIYDGKY--RYVQTWTDNMSSISVPKITKSTKP 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             +    +F PDLA+F MT ++DD  +++ +RV D+A  LGK V++ L+G R+ VKS  +Y
Sbjct: 178  AS-IATTFYPDLARFGMTSIDDDTRSVLVRRVYDMAAVLGK-VRIFLDGKRLDVKSPRDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
             ++Y  S   F E V+  W+  V  S+ +F+ VSFVN  AT +GG+HVD +AN +   V+
Sbjct: 236  FELYTISKPVF-ESVDG-WDFGVVGSD-EFKSVSFVNASAT-RGGSHVDAIANFIIKAVV 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
               +KK     VK   VKN L++FVN+ + NP F SQTK+ LT +      K   S  FL
Sbjct: 292  EAASKKK--ITVKPAVVKNKLFLFVNSRVVNPTFSSQTKDVLTSKNI----KISPSPAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK  A S I++ +++  N + +    K LKK DGTK   + G+ KL DA  AG +NS  C
Sbjct: 346  KK--AVSLILDEVIAETNIRDNLVDMKSLKKTDGTKKVRLTGVKKLTDATWAGTKNSNMC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA+AGLSV+GR+R+GVFPLRGKLLN R+AS + + NN EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLAIAGLSVIGRERYGVFPLRGKLLNTRDASVSSITNNVEITAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +   LRYG +MIMTD                             D DGSHI 
Sbjct: 464  LQTGKTYKDASLLRYGSVMIMTDA----------------------------DVDGSHIS 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
            GL++NF HS +PSLL+IP FL +F TPIV A+ K  +++ FYS+PD++ WK+    N   
Sbjct: 496  GLVMNFFHSQFPSLLEIPGFLKKFTTPIVVASYKK-EIVEFYSLPDFDEWKKETP-NHDK 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            +S KY+KGLGTST+++ K YF+N+    K F W DD  GE I+ +F+K + + RKKWLL 
Sbjct: 554  YSKKYFKGLGTSTTEDAKRYFKNLKGLMKMFDWTDDS-GELIDRSFNKSRPDDRKKWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F PGN +DQK+  I   DF++KELILFS  D++RSIPS+VDG KP QRKILF +FKRN  
Sbjct: 613  FVPGNQIDQKKSRIPVPDFIDKELILFSRYDVERSIPSVVDGFKPSQRKILFSAFKRNLT 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQFSGYV+EHS YHHGE SL   I+GMAQDFVGSNN+NLL PNGQFG+R  GGKD
Sbjct: 673  TEMKVAQFSGYVAEHSGYHHGEASLQGAIIGMAQDFVGSNNVNLLMPNGQFGSRLMGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            +ASARYIFT LSPI R +F K DD LL YL +DG  IEP +Y+PIIP +LVNG+ GIGTG
Sbjct: 733  SASARYIFTMLSPIARKIFDKADDVLLKYLEDDGDIIEPEYYVPIIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ +P+YNP+DI ANV+RL+ GE M  M PWYRGF G IE+   KE GV   V   +  
Sbjct: 793  FSTSVPSYNPKDIAANVKRLIAGEDMISMTPWYRGFTGKIEE---KEPGV--FVCKSVVS 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            ++  T  + ELP+  WT DY+E+LES++++    I  FR+   D  V FE+   +     
Sbjct: 848  IDGKTATVSELPVGSWTNDYKEYLESLVEKKA--IVDFREKHTDDKVLFEIDFHD----- 900

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                 LL   KL +TI TSNMH FD  G IKKY +P  IL E+F +R  FY KRKK  + 
Sbjct: 901  VPDPKLL---KLESTIRTSNMHAFDPSGRIKKYGSPLDILREWFEVRKRFYSKRKKYLIR 957

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L+        K RFI  +  GE+ +                       +K  E  VA  
Sbjct: 958  DLKHRTKITSYKHRFISMINAGELTI-----------------------TKKTENAVASE 994

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
             +  E  +     ++G     YDYL  M I +LT+E+ + L A+ +KL +E++ L   + 
Sbjct: 995  LNTLEFYK-----IDG----KYDYLTDMKISSLTIERAEKLKAEAEKLKDELEILENTSE 1045

Query: 1167 ESLWVKDLDAL 1177
            +++W+ DL+ +
Sbjct: 1046 QTMWLHDLETI 1056


>gi|448932168|gb|AGE55728.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
            MN0810.1]
          Length = 1056

 Score =  952 bits (2460), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/1155 (46%), Positives = 726/1155 (62%), Gaps = 109/1155 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ +H+L RPDTY+GS+ K  +  ++Y  ++  ++ +++SY P   KIFDEIL N+
Sbjct: 5    YVKLSQRDHVLTRPDTYVGSVAKEAREEYVYTGDA--IVKKSVSYSPAFLKIFDEILTNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV ID +H  +++ N G  +P+E H +EG YVPELIFGHLLT  N+D
Sbjct: 63   ADCFNRGAPMTTLKVSIDADH--VTIFNDGCSIPIEKH-DEGCYVPELIFGHLLTGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS +F +E  DG    KY Q +++NM   S+P ++K  + 
Sbjct: 120  DTQERTGAGRNGYGSKLTNIFSKKFDVEIYDGAH--KYIQSWSDNMTNASKPKVTKSSKA 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  +F PD  +F M+ +++D  +++ +RV D+A  L K VK+ L+G R+ VK   +Y
Sbjct: 178  GSIT-TTFYPDFERFGMSSIDEDTRSVLVRRVYDMAAVLTK-VKIFLDGKRLDVKGAKDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
             +MY  +   F     + W+I V  S+ +F+ VSFVN  +T +GGTHVD +AN VA  V 
Sbjct: 236  FEMYTDAKPVFE--TADGWDIGVCPSD-EFRSVSFVNASST-RGGTHVDLIANAVAKAVS 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
                KK     VK   VKN L++FVNA I NP+F SQTK+ LT +      KC  S  FL
Sbjct: 292  EAALKKK--VTVKPAVVKNKLFLFVNARIVNPSFSSQTKDILTSKNV----KCSPSAAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK  A S +++ +++  N ++S    K+LKK DG K   + GI KL DA  AG ++S  C
Sbjct: 346  KK--AVSAVLDDVIAETNVRESLVEMKNLKKTDGAKKVRLTGIKKLTDAAWAGTKHSGMC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA++ L+++GR+R+GVFPLRGKLLNVR+AS + + NN+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLAISSLAIIGRERYGVFPLRGKLLNVRDASVSSITNNAEIVAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LRNGTTYKDASSLRYGSVMLMTDA----------------------------DVDGSHIT 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS-FYSMPDYEAWKESLGGNAS 625
            GL++NF H+ +PSLL+IP FL +F TPIV A  K GK +  FYS+PD+E WK++ G    
Sbjct: 496  GLVVNFFHAQFPSLLEIPGFLKKFTTPIVIA--KRGKDMKEFYSLPDFEDWKKTSG---E 550

Query: 626  SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLL 685
             WSIKY KGLGTSTS++ K YF+N+    K F W DD   E I+ +F+K + + RK WLL
Sbjct: 551  KWSIKYLKGLGTSTSEDAKRYFKNLKGLTKVFGWTDDS-SELIDRSFNKSRADERKTWLL 609

Query: 686  QFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNF 745
             FEPGN +DQ    I   DF++KELILFS  D++RSIPS+VDGLKP QRKILF +FK+N 
Sbjct: 610  DFEPGNQIDQTLTKIPMDDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFSAFKKNL 669

Query: 746  IKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGK 805
              E KVAQFSGYVSEH+ YHHGE SL   I+ MAQD+VGSNNINLL P GQFG+R  GGK
Sbjct: 670  TSETKVAQFSGYVSEHAGYHHGEVSLQGAIVSMAQDYVGSNNINLLLPRGQFGSRLHGGK 729

Query: 806  DAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGT 865
            D+ASARYIFT+LSP TR +F K DD LL YL +DG +IEP +Y+P++P + VNG+ GIGT
Sbjct: 730  DSASARYIFTQLSPSTRDIFHKADDMLLKYLEDDGDKIEPEYYVPVVPWLAVNGANGIGT 789

Query: 866  GWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIE 925
            G+S+ IP+YNP+DIV NV+RL+N E M PM PWYRGF GTI   A    GV +T  G+ +
Sbjct: 790  GFSTNIPSYNPKDIVDNVKRLINNETMLPMTPWYRGFKGTI---AEASPGV-FTCHGVYD 845

Query: 926  EVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV-FLSEESM 984
               + T+ + ELPI  WT +Y+EFLES+I++    +  FR+  D+  V FE+ F+     
Sbjct: 846  TKGK-TITVSELPIGSWTNEYKEFLESLIEKK--IVADFREKHDEKNVLFEIDFIGVPDP 902

Query: 985  MRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQ 1044
                     K  KL +TI T+NMH FD    I+KYD+P  I+ ++F +R EFY KRK   
Sbjct: 903  ---------KILKLESTIRTTNMHAFDKNSRIRKYDSPLDIITDWFEVRKEFYVKRKNYL 953

Query: 1045 LENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVA 1104
            +++L+  +L   NK +FI  V +G +V+  R   D++ +L +  F               
Sbjct: 954  IKDLKERVLVARNKHKFISSVNDGVLVITRRMEEDVIKDLNKMKF--------------- 998

Query: 1105 GATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKA 1164
               D+ ++S              ++YLL M I +LT E+   L A+   L EE+  L   
Sbjct: 999  ---DKVDKS--------------FEYLLGMKISSLTKERADKLRAEALALEEELGVLENT 1041

Query: 1165 TPESLWVKDLDALDM 1179
            T E +WV D++A+ M
Sbjct: 1042 TTEQMWVSDINAIKM 1056


>gi|328876909|gb|EGG25272.1| DNA topoisomerase II [Dictyostelium fasciculatum]
          Length = 1233

 Score =  951 bits (2459), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/1211 (42%), Positives = 750/1211 (61%), Gaps = 111/1211 (9%)

Query: 14   NANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWI-----YEEESKT- 67
            +A+ +G ++ +K+IE++YQKK+  EH+LLRPD+YIG+I++     W+     + +E+K  
Sbjct: 74   SASTIGGSSKSKSIEDIYQKKTPTEHVLLRPDSYIGTIQRIEDDQWVLSNSEFNQETKKK 133

Query: 68   ------------MIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLIS 115
                        + H    Y+PGL KIFDEILVNAADNKQRDP M  ++V ID +   IS
Sbjct: 134  SSSSSATPVAPFIHHIKAKYIPGLLKIFDEILVNAADNKQRDPAMSTIRVDIDADKGSIS 193

Query: 116  VHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEF 175
            + N G G+PV IH+ E +YV E++ G L++ SN++D   K  GGRNG+GAKLTNIFS++F
Sbjct: 194  IMNDGHGIPVSIHKGEKIYVVEMVMGSLMSGSNFNDAELKVVGGRNGFGAKLTNIFSSDF 253

Query: 176  IIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN--WTKVSFKPDLAKFNMTHL-ED 232
             +ET D K    Y Q + +NMGK+ EP I      +   +T+++F+PDL +F+M  L +D
Sbjct: 254  KVETYDAKSKLLYSQSWKDNMGKREEPIIKSVHPMNQQEFTRITFRPDLKRFHMESLRDD 313

Query: 233  DVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHER-------- 284
            DV+ LM++RV D+A C    +KV  NG  +   +F  YV ++   +++  E+        
Sbjct: 314  DVLKLMERRVYDIAACC-PDIKVYFNGQHIQY-NFQSYVSLFEHHLSKHQEKNPSDTADN 371

Query: 285  -----VNERWEICVTLSE-GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK 338
                 V +RW+I +  S+ GQF QVSFVN I T+KGGTHV+++A+QV  ++   + KK  
Sbjct: 372  FVFANVGDRWKIGLATSDTGQFMQVSFVNSINTLKGGTHVNFIADQVVRYISDRLKKKYN 431

Query: 339  NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSG 398
            +  ++  N+K+HL +FVN LIDNP+FDSQTKETLT +  +FGS+ E+ E  L      S 
Sbjct: 432  DLEIRPMNIKHHLALFVNCLIDNPSFDSQTKETLTTKYQNFGSQPEIPEPVLAAFVKNSK 491

Query: 399  IVETLLSWANFKQSKDLKKNDGTKTED---VRGISKLEDANLAGGRNSEQCTLILTEGDS 455
            I+E +  W   KQ  +L  +  T+T     ++ I KL+DAN AGG+ S+ CTLILTEGDS
Sbjct: 492  ILEKIAGWVLMKQQAELVHSSSTRTSKASLLKNIHKLDDANWAGGQKSKLCTLILTEGDS 551

Query: 456  AKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGL---KQGVE 512
            AK+LA++GL V+GRD++GVFPLRGKLLNVR+ +  Q+LNN EI N+  ILGL   K+ ++
Sbjct: 552  AKSLAVSGLGVIGRDKYGVFPLRGKLLNVRDVTPKQLLNNEEINNLTNILGLSHKKKYID 611

Query: 513  YNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINF 572
              ++  LRYG +MIMTDQ                            D+DGSHIKGL+INF
Sbjct: 612  EESMADLRYGKIMIMTDQ----------------------------DNDGSHIKGLIINF 643

Query: 573  IHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAW-KESLGGNASSWSIKY 631
            IH FWP LL+   F+ EF+TPI+K + K  +  +F++M DY  W K S  G    W+IKY
Sbjct: 644  IHYFWPELLQ-RDFVEEFVTPIIKVS-KGSEKKAFFTMNDYHNWVKNSQSGVTKGWTIKY 701

Query: 632  YKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGN 691
            YKGLGT+TS E KEYF N+  H   F W  +    AI +AF+K  ++AR++WLL  +   
Sbjct: 702  YKGLGTNTSAEAKEYFSNLKKHIIKFTWSGEPSSNAIAMAFNKDAVQARQRWLLSSDTTQ 761

Query: 692  -HLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAK 750
              +D   K + + DF+NKELI +S A   RSIPS++DGLKPGQRKIL+ +FKR    E K
Sbjct: 762  LSVDHSIKELSFDDFINKELIHYSWAANHRSIPSVMDGLKPGQRKILYAAFKRKLTSEIK 821

Query: 751  VAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASA 810
            VAQFSGYV+EH+AYHHGEQSL+STI+ MAQDFVGSNNI LL   GQFGTR QGG D+AS 
Sbjct: 822  VAQFSGYVAEHTAYHHGEQSLSSTIVKMAQDFVGSNNIPLLTSGGQFGTRLQGGDDSASP 881

Query: 811  RYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSY 870
            RYIFT+L+ ITR +F   DD LL YL E+G+ I+P +Y+PI+P +LVNGS+GIG G S+ 
Sbjct: 882  RYIFTKLNSITRLIFNDLDDDLLKYLEEEGEMIQPNYYVPILPMILVNGSDGIGVGMSNS 941

Query: 871  IPNYNPRDIVANVRRLLNGE-MMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNE 929
            +P Y+P D++  +  LLN +  M+ + PWYRGF GTI + ++   G ++  +G+I  V  
Sbjct: 942  VPLYSPIDLIDYLLNLLNNQKQMKALVPWYRGFTGTIVRGSNAVNG-SFKTSGVITRVGR 1000

Query: 930  TTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQ 989
             TL I +LPI +WT DY+  L  +++++  FI+ +   + + +V F +  + + +    +
Sbjct: 1001 -TLVISDLPIGKWTVDYKVVLNDLVEKD--FIKSYHDGNTENSVSFTIHFTNDQLEEIDE 1057

Query: 990  ---EGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                 L+ KFKL +++  SN+ LFD+ G IKKY++ E+I+ EFF  R + Y  RKK+  +
Sbjct: 1058 MTDNELIDKFKLNSSLH-SNLMLFDTNGNIKKYESTEEIIGEFFQYRRKLYVDRKKMLQD 1116

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
             L+ ++ K    ++FI  + +G++ +  + +  ++ EL +  F   P             
Sbjct: 1117 RLKKQIDKFNVTIQFISLIASGKVKLGGKTKQLIIEELHKNKFKLAP------------- 1163

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
                          N  Q   ++YL ++ I  +T EK+  L  +  K  EE + ++    
Sbjct: 1164 --------------NQNQEEMFNYLFNLPILDMTQEKIDTLTQNLSKRTEEFNFIQSQES 1209

Query: 1167 ESLWVKDLDAL 1177
            + LW  DL  L
Sbjct: 1210 DQLWKTDLQQL 1220


>gi|155371498|ref|YP_001427032.1| hypothetical protein ATCV1_Z551L [Acanthocystis turfacea Chlorella
            virus 1]
 gi|155124818|gb|ABT16685.1| hypothetical protein ATCV1_Z551L [Acanthocystis turfacea Chlorella
            virus 1]
          Length = 1058

 Score =  951 bits (2457), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/1153 (46%), Positives = 734/1153 (63%), Gaps = 103/1153 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ +H+L RPDTY+GS+ K  +  ++Y  ++  ++ +++SY P   KIFDEIL N+
Sbjct: 5    YIKLSQRDHVLQRPDTYVGSVAKEAREEYVYTGDA--IVKKSVSYSPAFLKIFDEILTNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV ID +H  ++++N G  +PVE H EEG YVPELIFGHLLT  N+D
Sbjct: 63   ADCFNRGAPMTTLKVTIDADH--VTIYNDGCSIPVEKH-EEGCYVPELIFGHLLTGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS +F +E  DG R  KY Q +++NM   S+P ++K  + 
Sbjct: 120  DAQERTGAGRNGYGSKLTNIFSKKFDVEIYDGTR--KYLQTWSDNMTNASKPKVTKSSKP 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  +F PD  +F M  +++D  +++ +RV D+A  L K VK+ L+G R+ VK   +Y
Sbjct: 178  GSIT-TTFYPDFERFGMDSIDEDTRSVLVRRVYDMAAVLTK-VKIFLDGKRLDVKGAKDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
             +MY ++   F E V + W+I V  S+ +F+ VSFVN  +T +GGTHVD +AN VA  V 
Sbjct: 236  FEMYTEAKPVF-ESV-DGWDIGVCPSD-EFRSVSFVNASST-RGGTHVDLIANAVAKAVA 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
                   K   VK   VKN L++FVNA + NP+F SQTK+ LT    S   KC  S  FL
Sbjct: 292  E--AALKKKVTVKPAVVKNKLFIFVNARVVNPSFSSQTKDILT----SKNVKCSPSAAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK  A S +++ +++  N ++S    K+LKK DG K   + GI KL DA  AG ++S  C
Sbjct: 346  KK--AVSAVLDDVIAETNVRESLVEMKNLKKTDGAKKVRLTGIKKLTDAAWAGTKHSGMC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGRDR+G+FPLRGKLLNVR+AS + + NN+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRDRYGIFPLRGKLLNVRDASVSSITNNAEITAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ GV Y +  SLRYG ++IM DQ                            D DGSHI 
Sbjct: 464  LRNGVNYKDASSLRYGSVIIMADQ----------------------------DVDGSHIA 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
            GL++NF H+ +PSLL+IP FL  F+TPIV A  K  K++ FYS+PD+E WK +   + S+
Sbjct: 496  GLVLNFFHAQFPSLLEIPGFLKRFVTPIVVA-KKGTKMVEFYSIPDFEEWKAATS-DVST 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            W  KYYKGLGTS + + K YF N+    K   W D+   E+I+ +F+K + + RK WLL 
Sbjct: 554  WKTKYYKGLGTSDANDAKRYFNNLKALVKTLTWSDNA-AESIDKSFNKSRADERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            FEPGN LDQK   I   DF+NK+LILFS  D++RSIPS+VDGLKP QRKILF + KRN +
Sbjct: 613  FEPGNQLDQKLTKIPVEDFINKDLILFSRYDVERSIPSVVDGLKPSQRKILFSALKRNLV 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
            +E KVAQF+GY SE++ YHHGE SL   I+GMAQD+VGSNNINLL P GQFG+R  GGKD
Sbjct: 673  QEIKVAQFAGYTSENAGYHHGEASLQGAIVGMAQDYVGSNNINLLLPRGQFGSRLHGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            +ASARYIFT+LSP TR +F K D++LL+YL +DG +IEP +Y+P IP +LVNGS GIGTG
Sbjct: 733  SASARYIFTQLSPNTRDIFHKADERLLNYLEDDGDRIEPEYYVPTIPFLLVNGSSGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP YNP+DIV NV+RL+N E M PM PWYRGF G I++T+    GV +T +G+  +
Sbjct: 793  FSTNIPAYNPKDIVDNVKRLINNETMLPMTPWYRGFKGDIKETS---PGV-FTCSGVY-D 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            +   T+ + ELP+  WT DY+E LE++I++    +  FR+   +  V FE+       + 
Sbjct: 848  IKGKTVTVSELPVGTWTNDYKEHLETLIEKK--IVADFRERHTELNVHFEI-----DFVG 900

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
            T    +L   KL +TI T+NMH FD  G IKKYD+P +I+ ++F  R EFY KRK+  L+
Sbjct: 901  TLDPNIL---KLESTIRTTNMHAFDPSGKIKKYDSPLEIIADWFTTRKEFYVKRKEDLLK 957

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L+  +L  +NK RFI  V +G +V+  R   D++ +L   G   F K  KS        
Sbjct: 958  DLKARVLVAQNKSRFITSVNDGTLVITRRAEEDVIKDL---GKLKFYKVDKS-------- 1006

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
                                 +DYLL M I +LT E+ + L A+   L +E+  L     
Sbjct: 1007 ---------------------FDYLLGMKISSLTKERAEKLQAEAAALEKELVILENTAT 1045

Query: 1167 ESLWVKDLDALDM 1179
            E++WV D++A+ M
Sbjct: 1046 EAMWVNDIEAIKM 1058


>gi|448933486|gb|AGE57042.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus NE-JV-3]
          Length = 1058

 Score =  950 bits (2455), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/1152 (46%), Positives = 736/1152 (63%), Gaps = 105/1152 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ +H+L RPDTY+GS+ K  +  ++Y  ++  ++ +++SY P   KIFDEIL N+
Sbjct: 5    YIKLSQRDHVLQRPDTYVGSVAKEAREEYVYTGDA--IVKKSVSYSPAFLKIFDEILTNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV ID +H  +++ N G  +PVE H EEG YVPELIFGHLLT  N+D
Sbjct: 63   ADCVNRGAPMTTLKVTIDADH--VTIFNDGCSIPVEKH-EEGCYVPELIFGHLLTGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS +F +E  DG R  KY Q +++NM   S+P ++K  + 
Sbjct: 120  DAQERTGAGRNGYGSKLTNIFSKKFDVEIYDGTR--KYLQTWSDNMTNASKPKVTKSSKP 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  +F PD  +F+M  +++D  +++ +RV D+A  L K VK+ L+G R+ VK   +Y
Sbjct: 178  GSIT-TTFYPDFERFSMVSIDEDTRSVLVRRVYDMAAVLTK-VKIFLDGKRLDVKGAKDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
             +MY ++   F E V + W+I V  S+ +F+ VSFVN  +T +GGTHVD +AN VA  V 
Sbjct: 236  FEMYTEAKPVF-ESV-DGWDIGVCPSD-EFRSVSFVNASST-RGGTHVDLIANAVAKAVA 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
                   K   VK   VKN L++FVNA + NP+F SQTK+ LT    S   KC  S  FL
Sbjct: 292  E--AALKKKVTVKPAVVKNKLFIFVNARVVNPSFSSQTKDILT----SKNVKCSPSVAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK  A S +++ +++  N ++S    K+LKK DG K   + GI KL DA  AG ++S  C
Sbjct: 346  KK--AVSAVLDDVIAETNVRESLVEMKNLKKTDGAKKVRLTGIKKLTDAAWAGTKHSGMC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + + NN+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSITNNAEITAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ GV Y +  SLRYG +MIM+DQ                            D DGSHI 
Sbjct: 464  LRNGVNYKDASSLRYGSVMIMSDQ----------------------------DVDGSHIA 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
            GL++NF H+ +PSLL+IP FL  F+TPIV A  K  K++ FYS+PD+E WK +   + S+
Sbjct: 496  GLVLNFFHAQFPSLLEIPGFLKRFVTPIVVA-KKGTKMVEFYSIPDFEEWKAATP-DVST 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            W  KYYKGLGTS + + K YF N+ +  K   W DD   E+I+ +F+K + + RK WLL 
Sbjct: 554  WKTKYYKGLGTSDANDAKRYFNNLKVLVKTLTWSDDA-AESIDKSFNKSRADERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQK   I   DF+NK+LILFS  D++RSIPS+VDGLKP QRKILF +F+RN  
Sbjct: 613  FKPGNQLDQKLTKIPVEDFINKDLILFSRYDVERSIPSVVDGLKPSQRKILFSAFRRNLT 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQFSGYVSEH+ YHHGE SL   I+GMAQD+VGSNNINLL P G FG+R  GGKD
Sbjct: 673  SEIKVAQFSGYVSEHAGYHHGEASLQGAIVGMAQDYVGSNNINLLLPRGSFGSRLHGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            +ASARYIFT+LSP TR +F K D++LL+YL +DG +IEP +Y+P IP +LVNG+ GIGTG
Sbjct: 733  SASARYIFTQLSPNTRDIFHKADERLLNYLEDDGDKIEPEYYVPTIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNPR+IV NV+RL++G+ M  M PWYRGF G I++ +    GV +T  G+  E
Sbjct: 793  FSTNIPSYNPREIVDNVKRLIDGKAMAEMTPWYRGFKGIIKEAS---PGV-FTCHGVY-E 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV-FLSEESMM 985
            +   T+ + ELP+  WT +Y+E++ES+I++       FR+  D+T V FE+ F+      
Sbjct: 848  IKGKTVTVSELPVGTWTNEYKEYIESLIEKK--IAADFREKHDETNVLFEIDFIGVPDP- 904

Query: 986  RTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQL 1045
                    K  KL +TI T+NMH FD +G IKKYD+P  I+ ++F  R EFY KRK+  L
Sbjct: 905  --------KILKLDSTIRTTNMHAFDPEGKIKKYDSPLDIITDWFATRKEFYIKRKEDLL 956

Query: 1046 ENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAG 1105
            ++L+  +L  +NK RFI  V +G +++  R   D++ +L +  F                
Sbjct: 957  KDLKARVLVAQNKSRFITSVNDGTLIITRRAEEDVIKDLNKMKF---------------- 1000

Query: 1106 ATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKAT 1165
              D+ + S              ++YLL M I +LT E+ + L A+   L EE+  L+  T
Sbjct: 1001 --DKVDGS--------------FEYLLGMKISSLTKERAEKLQAEAVTLEEELVVLKNTT 1044

Query: 1166 PESLWVKDLDAL 1177
             E +WV D+DA+
Sbjct: 1045 AEQMWVSDIDAI 1056


>gi|281203022|gb|EFA77223.1| DNA topoisomerase II [Polysphondylium pallidum PN500]
          Length = 1265

 Score =  950 bits (2455), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/1243 (42%), Positives = 759/1243 (61%), Gaps = 134/1243 (10%)

Query: 10   TTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEE----- 64
            TT++N  V    A +K+IE++YQKK+  EH+LLRPD+YIG+I+     +W+  +      
Sbjct: 79   TTASNTKV----AKSKSIEDVYQKKTPTEHVLLRPDSYIGTIQTIEDDMWMLSKSIFGST 134

Query: 65   --------SKTM----------------IHRTIS-YVPGLYKIFDEILVNAADNKQRDPK 99
                    SK +                IH   + Y+PGL KIFDEILVNAADNKQRD  
Sbjct: 135  KNDSQSTSSKKLKSTDSTATVATVDPLYIHSVKAKYIPGLLKIFDEILVNAADNKQRDNT 194

Query: 100  MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGG 159
            M  +KV +D    ++SV N G G+PV +H+ E VYVPE++ G+L++ SN++D+  K  GG
Sbjct: 195  MSYIKVELDPVSGVLSVENDGKGIPVAMHKTENVYVPEMVMGNLMSGSNFNDSELKVVGG 254

Query: 160  RNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFK 219
            RNG+GAKLTNIFS  F +ET D     +Y Q +++NM  + +P I K +    +T++ FK
Sbjct: 255  RNGFGAKLTNIFSKHFKVETYDKSNGLRYSQSWSDNMSVRHDPIIEKVRLSSEFTRIEFK 314

Query: 220  PDLAKFNMTHL-EDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK-SFAEYVDMYPKS 277
            PDL KF++  L  +D++ LM++RV D+AGC    +KV LNG   P+K  F  Y  +Y   
Sbjct: 315  PDLEKFHLKSLVGEDIIYLMERRVYDIAGC-NPDIKVSLNG--TPIKYDFQSYAKLYEHH 371

Query: 278  VTRFHER-------------VNERWEICVTLSE-GQFQQVSFVNGIATIKGGTHVDYVAN 323
            ++R  E+             + +RW I +  S+ GQF QVSFVN I T+KGG+HV+++A+
Sbjct: 372  LSRSQEKNLSNPQDNLTFGQIGDRWNIGIGTSDTGQFTQVSFVNSINTLKGGSHVNFIAD 431

Query: 324  QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
            QV  ++   + KK+ +  V+  N+K+HL +FVN LI+NP+FDSQTKETLT +  +FGS  
Sbjct: 432  QVIRYIAERIKKKHPDLEVRPMNIKHHLSLFVNCLIENPSFDSQTKETLTTKPINFGSTP 491

Query: 384  ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED---VRGISKLEDANLAGG 440
            E+ E+ L++   +S I++ +  W   +Q  +L     T+T      + I KL+DAN AGG
Sbjct: 492  EVPEKMLEQFVKQSKIIDKIAGWVLMRQQAELVYQSSTRTSKSTLAKSIPKLDDANWAGG 551

Query: 441  RNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGN 500
              S QCTLI+TEGDSAK+LA+AG+SV+GRDRFGVFPLRGKLLNVR+ +  Q+L+N EI N
Sbjct: 552  PKSRQCTLIITEGDSAKSLAVAGMSVLGRDRFGVFPLRGKLLNVRDVAPKQLLSNEEINN 611

Query: 501  IKKILGLKQGVEYNNVKSL---RYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLA 557
            +  ILGL     Y++ +SL   RYG ++IMTDQ                           
Sbjct: 612  LTNILGLSHKRRYHDEQSLSELRYGKVLIMTDQ--------------------------- 644

Query: 558  QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWK 617
             D+DGSHIKGL INFIH FWP LLK   FL EF+TPI+K + K     SF+++ DY  W+
Sbjct: 645  -DNDGSHIKGLFINFIHYFWPELLK-ADFLEEFVTPIIKVS-KGADRKSFFTINDYLKWQ 701

Query: 618  ESLGGNA-SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKK 676
             SL   +   W+IKYYKGLGT+TS E KEYF N+  H   F W D+ D   I +AF+K  
Sbjct: 702  RSLPDQSLKGWNIKYYKGLGTNTSAEAKEYFSNLKKHVIKFKWNDESD-HLIGMAFNKDA 760

Query: 677  IEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKI 736
             + R++WL+  +    +D   K + YSDF+NKEL+ +S A   RSIPS++DGLKPGQRKI
Sbjct: 761  ADKRQQWLMAADMTQSVDHSIKELSYSDFINKELVHYSWAANHRSIPSVMDGLKPGQRKI 820

Query: 737  LFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQ 796
            LF  FKRN   E KVAQ SGYV+EH+AYHHGEQSL+STI+ MAQDFVGSNNI L+   GQ
Sbjct: 821  LFACFKRNLTHEIKVAQLSGYVAEHTAYHHGEQSLSSTIVKMAQDFVGSNNIPLISQGGQ 880

Query: 797  FGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVL 856
            FGTR  GG D+AS RYIFT+L+ ITR ++   D++ L++L E+G+ I+P++Y+PIIP +L
Sbjct: 881  FGTRLMGGDDSASPRYIFTKLNQITRLIYNDLDEESLNFLEEEGESIQPSYYIPIIPMIL 940

Query: 857  VNGSEGIGTGWSSYIPNYNPRDIVAN-VRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAG 915
            VNGS GIG G S+ +P Y+P D++   + +L N   M+ + PWYRGF G I       +G
Sbjct: 941  VNGSSGIGVGMSNSVPLYSPIDLIEYLLLKLSNQRQMKKLIPWYRGFKGNIVI-----SG 995

Query: 916  VTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDF 975
             ++  +G+I+     +L I+E+PI +WT DY++ L  +I+Q+   I+ F + + + TV+F
Sbjct: 996  KSFKTSGLIKITGRNSLSIREIPIGKWTSDYKQVLNDLIEQD--IIKSFTEENTENTVNF 1053

Query: 976  EVFLSEESMMRTKQEG---LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
             V  + E M R ++     LL  FKLT+ +   N+ LF   G +KKY++ E+I++EF+ +
Sbjct: 1054 TVSTTYEQMERLEESTENELLSLFKLTSLVH-PNLTLFAPDGTVKKYESVEEIVDEFYGV 1112

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            RL+ Y KR++  ++ L+ ++ K +  + FI  + +G++ +    + +++ +L  KGF   
Sbjct: 1113 RLDAYVKRRENIMKKLQQQIDKHKVTINFIQLIASGKVKIGGVSKDNVIKDLEAKGFHL- 1171

Query: 1093 PKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRD 1152
                               E  + PE         + YL ++ I  +T EK+  L     
Sbjct: 1172 -------------------EGNQQPEET-------FTYLFNLPILEMTQEKITTLTNLYT 1205

Query: 1153 KLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEER 1195
            K  EE + ++  T ++LW  DL    +QL +    DA  + E+
Sbjct: 1206 KKTEEFNAIQAQTADNLWKTDL----LQLRDALLKDASYKREK 1244


>gi|448935941|gb|AGE59490.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
            OR0704.3]
          Length = 1056

 Score =  949 bits (2453), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 541/1153 (46%), Positives = 734/1153 (63%), Gaps = 109/1153 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ +H+L RPDTY+GS+ K  +  ++Y  ++  ++ +++SY P   KIFDEIL N+
Sbjct: 5    YIKLSQRDHVLQRPDTYVGSVAKEAREEYVYTGDA--IVKKSVSYSPAFLKIFDEILTNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV ID +H  ++++N G  +PVE H EEG YVPELIFGHLLT  N+D
Sbjct: 63   ADCFNRGAPMTTLKVTIDTDH--VTIYNDGCSIPVEKH-EEGCYVPELIFGHLLTGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS +F +E  DG R  KY Q +++NM   S+P ++K  + 
Sbjct: 120  DAQERTGAGRNGYGSKLTNIFSKKFDVEIYDGTR--KYLQTWSDNMTNASKPKVTKSSKP 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
               T  +F PD  +F+M  +++D  +++ +RV D+A  L K VK+ L+G R+ VK   +Y
Sbjct: 178  GGIT-TTFYPDFERFSMVSIDEDTRSVLVRRVYDMAAVLTK-VKIFLDGKRLDVKGAKDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
             +MY   V    E V+  W+I V  S+ +F+ VSFVN  +T +GGTHVD +AN VA  V 
Sbjct: 236  FEMY-TDVKIVFESVDG-WDIAVCPSD-EFRSVSFVNASST-RGGTHVDLIANAVAKAVA 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
                   K   VK   VKN L+VFVNA + NP+F SQTK+ LT    S   KC  S  FL
Sbjct: 292  E--AALKKKVTVKPAVVKNKLFVFVNARVVNPSFSSQTKDILT----SKNVKCSPSTAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK  A   +++ +++  N ++S    K+LKK DG K   + GI KL DA  AG +NS  C
Sbjct: 346  KKAVA--AVLDDVIAETNVRESLVEMKNLKKTDGAKKVRLTGIKKLTDAAWAGSKNSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + + NN+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSITNNAEIVAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LRNGTTYKDASSLRYGSVMLMTDA----------------------------DVDGSHIA 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS-FYSMPDYEAWKESLGGNAS 625
            GL++NF H+ +PSLL+IP FL +F TPIV A  K GK ++ FYS+PD+E WK++ G    
Sbjct: 496  GLVLNFFHAQFPSLLEIPGFLKKFTTPIVIA--KRGKDMNEFYSLPDFEDWKKTSG---D 550

Query: 626  SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLL 685
             WS+KY KGLGTSTS++ K YF+N+    K F W DD   E I+ +F+K + + RK WLL
Sbjct: 551  KWSVKYLKGLGTSTSEDAKRYFKNLKGLTKVFGWTDDS-SELIDRSFNKSRADERKTWLL 609

Query: 686  QFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNF 745
             FEPGN LDQ    I   DF+NKELILFS  D++RSIPS+VDGLKP QRKILF +F+RN 
Sbjct: 610  NFEPGNQLDQTLTKIPVDDFLNKELILFSRYDVERSIPSVVDGLKPSQRKILFSAFRRNL 669

Query: 746  IKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGK 805
              E KVAQF+GY SEH+ YHHGE SL   I+GMAQD+VGSNNINLL P GQFG+R  GGK
Sbjct: 670  TSEIKVAQFAGYTSEHAGYHHGEASLQGAIIGMAQDYVGSNNINLLAPKGQFGSRLHGGK 729

Query: 806  DAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGT 865
            D+ASARYIFT+LSP TR +F K D++LL+YL EDG +IEP +Y+P IP +LVNG+ GIGT
Sbjct: 730  DSASARYIFTQLSPNTRDIFHKADERLLNYLEEDGDKIEPEYYVPTIPFLLVNGANGIGT 789

Query: 866  GWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIE 925
            G+S+ IP+YNP++I+ NV+RL++G+ M PM PWYRGF GTI + +    GV +T +G+  
Sbjct: 790  GFSTNIPSYNPKEIIDNVKRLIDGKPMVPMTPWYRGFKGTIVEAS---PGV-FTCSGVY- 844

Query: 926  EVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV-FLSEESM 984
             +    + + ELP+  WT DY+E LE++I++    +  FR+  D+T V FE+ F+     
Sbjct: 845  SIKGKMVTVSELPVGTWTNDYKEHLETLIEKK--IVADFREKHDETNVLFEIDFIGVPDP 902

Query: 985  MRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQ 1044
                     K  KL +TI T+NMH FDS+G IKKYDTP  I+ ++F  R EFY KRK+  
Sbjct: 903  ---------KILKLESTIRTTNMHAFDSRGKIKKYDTPLDIMTDWFSTRKEFYVKRKEDL 953

Query: 1045 LENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVA 1104
            L++L+  +L  +NK  FI  V +G +V+  R   D++ +L++  F               
Sbjct: 954  LKDLKARVLVAQNKHMFITSVNDGTLVITRRAEEDVVKDLKKMKF--------------- 998

Query: 1105 GATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKA 1164
                         + V+G     ++YLL M I +LT E+ + L A+   L EE+  L+  
Sbjct: 999  -------------DRVDG----SFEYLLGMKISSLTKERAEKLRAEAMALEEELIVLQNT 1041

Query: 1165 TPESLWVKDLDAL 1177
            T E +WV D+DA+
Sbjct: 1042 TTEQMWVSDIDAI 1054


>gi|390335410|ref|XP_003724141.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-alpha-like
            [Strongylocentrotus purpuratus]
          Length = 1597

 Score =  949 bits (2453), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 554/1229 (45%), Positives = 746/1229 (60%), Gaps = 146/1229 (11%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            ++E +YQKK+QLEHILLRPDTYIGS E  TQA+W+ + E  T+++R I++VPGLYKIFDE
Sbjct: 39   SVERIYQKKTQLEHILLRPDTYIGSTEPLTQAMWVIDGE--TLVNREITFVPGLYKIFDE 96

Query: 86   ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
            ILVNAADNKQRDP M+ +K+ ID E++ ISV N+G G+PV  H+ E +YVPE+IFGHLLT
Sbjct: 97   ILVNAADNKQRDPNMNCIKITIDSENNTISVWNNGKGIPVVEHKGEKMYVPEMIFGHLLT 156

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD---GKRLKK------------YKQ 190
            SSNYDD  KK TGGRNGYGAKL NIFS +F + TA    GK+ K+            +K+
Sbjct: 157  SSNYDDTQKKVTGGRNGYGAKLCNIFSKKFSVSTASKDYGKKFKQQEVLRFYCQQGLWKE 216

Query: 191  VFTNNMGKKSEP-----NISKC----KEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK-- 239
            +     G+  +P     + S C    +EG  + K+       +    H    VV ++K  
Sbjct: 217  IQAGLNGEDEKPTEILKHWSLCNPETEEGARFLKM-----FCRLLFIHQPSKVVNVVKFF 271

Query: 240  ----KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNE 287
                    D++    K         R  V  F  YVDM+ K         +   HE+VN 
Sbjct: 272  QELHHTASDMSAFTRK---------RHGVTGFKSYVDMFVKCFQPEDREPLKVLHEQVNP 322

Query: 288  RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHN 346
            RWE+C+ +SE  FQQVSF N IAT KGG HVD+VA+QV   ++  V KKNK   N+K   
Sbjct: 323  RWEVCLCMSEKGFQQVSFCNSIATTKGGRHVDFVADQVITKLIETVKKKNKGGVNIKPFQ 382

Query: 347  VKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSW 406
            +KNH+ VFVN LI+NP FDSQTKE +TL+   FGS+C+LS++F+K      GIVE+++SW
Sbjct: 383  IKNHVMVFVNCLIENPTFDSQTKENMTLQAKKFGSECKLSDKFIKGALT-CGIVESIMSW 441

Query: 407  ANFK-QSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLS 465
              FK QS+  KK   +K   ++GI KL+DAN AGG+NS +CTLILTEGDSAK LA++GL 
Sbjct: 442  MKFKAQSQLDKKCHSSKHSKLKGIPKLDDANDAGGKNSIKCTLILTEGDSAKTLAVSGLG 501

Query: 466  VVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYG 522
            VVGRD +GVFPLRGKLLNVREAS  Q++ N EI N+ KILGL+   +Y   +++K+LRYG
Sbjct: 502  VVGRDHYGVFPLRGKLLNVREASHKQIMENVEINNVIKILGLQYKNKYETPDSLKTLRYG 561

Query: 523  HLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK 582
             LMIMTDQ                            D DGSHIKGLLINFI   WP+LL 
Sbjct: 562  KLMIMTDQ----------------------------DQDGSHIKGLLINFIQHNWPNLLH 593

Query: 583  IPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKE 642
              +FL EFITPIVK T K  +   FYS+P++E WK+   G + +W +K            
Sbjct: 594  -HNFLEEFITPIVKVT-KGKETHPFYSLPEFEEWKDETEG-SKAWKVK------------ 638

Query: 643  GKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKY 702
               Y++ +   ++  ++   +  E  E+     K+      + +    +H +        
Sbjct: 639  ---YYKGLKPGQRKVLYTCFKKYEKKEI-----KVAQMAGAVAELSAYHHGETSLMSTIV 690

Query: 703  SDFVNKELILFSMADL-------QRSIPSMVD-------GLKPGQRKILFCSFKRNFIKE 748
            +   N  LI+F    L       Q S  S +         LKPGQRK+L+  FK+   KE
Sbjct: 691  NLAQNFSLIVFXCIYLCIVYLGCQFSHHSPISDPAKSPLCLKPGQRKVLYTCFKKYEKKE 750

Query: 749  AKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAA 808
             KVAQ +G V+E SAYHHGE SL STI+ +AQ+FVGSNN+NLLQP GQFGTR  GGKDAA
Sbjct: 751  IKVAQMAGAVAELSAYHHGETSLMSTIVNLAQNFVGSNNVNLLQPIGQFGTRLHGGKDAA 810

Query: 809  SARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWS 868
            SARYIFT+LS ++R LFP  DD LL Y  +D Q+IEP  Y+PIIP VLVNGSEGIGTGWS
Sbjct: 811  SARYIFTQLSTLSRLLFPAHDDNLLAYQYDDNQRIEPETYIPIIPMVLVNGSEGIGTGWS 870

Query: 869  SYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVN 928
            + I NY+ R++ AN+RRL+ GE   PM P Y+GF GTIE+         + V+G I  ++
Sbjct: 871  TKISNYDVREVTANIRRLVAGEEPVPMIPSYKGFKGTIEELEPNR----FVVSGEISIID 926

Query: 929  ETTLRIKELPIRRWTQDYRE-FLESIIDQNDS---FIRGFRQYSDDTTVDFEVFLSEESM 984
              T+ I ELP+R WTQ Y+E  LE ++  ++     I  +++Y  DTTV F + +SE+ +
Sbjct: 927  NDTIEITELPVRTWTQVYKEQVLEPMLHGSEKVQPMITDYKEYHTDTTVKFVIKMSEDKL 986

Query: 985  MRTKQEGLLKKFKLTTTISTSN-MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKV 1043
            ++ +++GL K FKL +TIS +N M L+DS GVI++YD  E+IL EFF +R+E Y  RK  
Sbjct: 987  LKAEEQGLHKTFKLQSTISQANVMVLYDSNGVIRRYDNVEEILREFFALRVELYHSRKAY 1046

Query: 1044 QLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVV 1103
                LE E  +L N+ RFI+  + G+I + N  + +++  L ++GF   P  +     V 
Sbjct: 1047 LEGILEAESSRLNNQARFIMEKIEGKIKIENMPKKEMIQILVKRGFDSDPVKAWKESQVK 1106

Query: 1104 AG-------ATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNE 1156
            AG        T++ E +E  P+        DY+YLL MA+ +LT EK   LL +RD    
Sbjct: 1107 AGEQPAGGEDTEDEEAAEATPD-----SGPDYNYLLGMALWSLTKEKKDALLKNRDDKAR 1161

Query: 1157 EVDDLRKATPESLWVKDLDALDMQLDELD 1185
            E++ L+  T   LWV+DLD    +LD ++
Sbjct: 1162 ELEILKGKTATMLWVEDLDMFSAELDRVE 1190


>gi|123484430|ref|XP_001324264.1| topoisomerase II [Trichomonas vaginalis G3]
 gi|121907144|gb|EAY12041.1| topoisomerase II [Trichomonas vaginalis G3]
          Length = 1458

 Score =  949 bits (2452), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/1246 (43%), Positives = 749/1246 (60%), Gaps = 113/1246 (9%)

Query: 28   EEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEIL 87
            +E Y K +  EH+L RPD+YIGSIE     +W+  E+ K    R ISYVPGLYKIFDEIL
Sbjct: 14   DEQYVKLTHREHVLTRPDSYIGSIEPRECKMWVCNEDGK-FEFREISYVPGLYKIFDEIL 72

Query: 88   VNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEG----VYVPELIFGHL 143
            VNAADNKQRDP +  +KV +D   + ISV N G G+  +           Y+PE IF  L
Sbjct: 73   VNAADNKQRDPPLTTIKVEVDPAQNRISVWNDGKGISTQKQFSPNDNCEYYIPEFIFSQL 132

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LTSSNY+D  +K TGGRNGYGAKL NIFS +F I   +      Y+Q  T+NM     P 
Sbjct: 133  LTSSNYNDKQEKVTGGRNGYGAKLANIFSKKFHINIYNADEGINYQQTITDNMTNIQPPK 192

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            +   K   ++T++SF PDL +FN+  +  D V L+++RV DLAG L K VK+  NG++VP
Sbjct: 193  LKNGKGKGSYTEISFWPDLERFNLQTITKDHVDLIRRRVYDLAGILPK-VKIFWNGNQVP 251

Query: 264  VKSFAEYVDMYPKSVTR--FHERVNER---WEICVTLSEG-QFQQVSFVNGIATIKGGTH 317
            +K + +Y  +Y K   +    E  NE+   W+I V  S+  +FQQ+SFVN +AT  GGTH
Sbjct: 252  IKKWEDYCKVYLKEDVKPLVCEVKNEKGYTWKIGVAPSKSREFQQISFVNCVATSNGGTH 311

Query: 318  VDYVANQVANHVMAVV-NKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD V NQ+  ++   + N+++     K   VKN L+VFV++L+ NP+FDSQTKE LTL Q
Sbjct: 312  VDVVVNQITKYITDYLKNRRSGKVETKPSVVKNFLYVFVDSLVINPSFDSQTKERLTLDQ 371

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
                  C+L + FL K+  K+ IV  +  +ANFK+ + +    GTK   +  I+KLEDAN
Sbjct: 372  KKLKDDCKLPDNFLDKI-LKTDIVALVTEYANFKEQRKVANMKGTKKGRLI-INKLEDAN 429

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
            +AG   S +CTLILTEGDSAKA A+ GL+ +GRD +GVFPLRGKLLN R+ S+ ++  N 
Sbjct: 430  MAGKAESLKCTLILTEGDSAKATAVTGLATIGRDYYGVFPLRGKLLNTRDISAKKLSEND 489

Query: 497  EIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            EI NI KI+GL    +Y N   +K LRYG +MIM D                        
Sbjct: 490  EIQNIIKIMGLDPMEKYENDDSMKRLRYGSIMIMAD------------------------ 525

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK--VLSFYSMP 611
                QD DGSHIKGL+INF+HS WP+LLK  +F+ EFITPIVK T  N K   +SF+++P
Sbjct: 526  ----QDVDGSHIKGLIINFVHSMWPNLLKKRNFITEFITPIVKVTKGNNKKGAISFFTIP 581

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            ++  WK +   N   + +KYYKGL TST++E KEYF NI+ HKK F++ ++ D E I LA
Sbjct: 582  EFSQWKAA-NNNGKGYKMKYYKGLATSTAEEAKEYFSNISKHKKVFIYTNENDEERINLA 640

Query: 672  FSKKKIEARKKWLLQFEPG-NHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            F+KK+ + RK WL Q +    +L  K+ +IKYSDFV+KELILFS     R+IPS +DG K
Sbjct: 641  FAKKRADDRKNWLAQLDANETYLGTKDTHIKYSDFVDKELILFSSYANYRAIPSSIDGWK 700

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRKIL+   K N   + KVAQ SG VSE +AYHHGE SL  TI+GM QDFVGSNNIN+
Sbjct: 701  PGQRKILWVCLKNNIKNDLKVAQLSGKVSEQAAYHHGEASLNETIIGMCQDFVGSNNINV 760

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
             QP G  GTR  GG+D+ S RY++T L  ITR +F K+DD LL Y  ++G  IEP  Y+P
Sbjct: 761  FQPIGMLGTRLAGGEDSGSPRYVYTALEKITRTIFMKEDDDLLTYNTDEGLPIEPVTYIP 820

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI---- 906
            IIP VLVNG++GIG GWSS +P Y P+DI+ N+RR +N E M  M PWY GF G I    
Sbjct: 821  IIPMVLVNGAKGIGVGWSSEVPQYCPQDIIDNLRRKMNDEPMVEMTPWYSGFTGKIIPIQ 880

Query: 907  -EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI------------ 953
              K   K+  V +   GI++++++TT+ I ELPI  WT DY++FLE +            
Sbjct: 881  VIKDGVKQPIVKWESRGIVKKIDDTTIEITELPIGIWTYDYKKFLEGLTVGESLNPHKKL 940

Query: 954  -----------------------IDQND---------SFIRGFRQYSDDTTVDFEVFLSE 981
                                   ++Q D           I  FR+Y  + +V F + + +
Sbjct: 941  ADRKAAAAKAKRTKKKAAAGDDPVEQADVEEKVNLGGPKISEFREYHTNVSVHFIITVDD 1000

Query: 982  ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
              M   +  GL + FKL ++I+ +NM LF+++  I ++++P  I+ +++ +R+++YE+R 
Sbjct: 1001 SQMREIESVGLREFFKLKSSITATNMTLFNAQNKIVQFNSPLDIINDYYPVRMKYYEERH 1060

Query: 1042 KVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF-----PKNS 1096
            +  ++ L+L+  KL N+ RFI  V+ G I VN   R  +L  L +  +  +      K  
Sbjct: 1061 RYLIDALQLQYKKLSNQARFIREVIAGIIKVNGVPRATILAALERGNYDLYDDKELTKRI 1120

Query: 1097 KSIEAVVAGATDETE-----ESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADR 1151
            K  + V+    +E E     +SE N + +  ++   YDYLL+M I TLT EK   L  + 
Sbjct: 1121 KFADEVIQQHNEEEEEQNEFKSESNADHLALLEK-GYDYLLAMKIWTLTKEKADKLDDEA 1179

Query: 1152 DKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMK 1197
             K N+E++++ K  P   + +DLD  ++   E    +A+ E+ R++
Sbjct: 1180 KKKNQELEEMLKKKPIDFYKEDLDKFEV---EWKAFEAKREKTRLE 1222


>gi|448925985|gb|AGE49563.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
            Can0610SP]
          Length = 1058

 Score =  949 bits (2452), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 535/1152 (46%), Positives = 738/1152 (64%), Gaps = 105/1152 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ +H+L RPDTY+GS+ K  +  ++Y  ++  ++ +++SY P   KIFDEIL N+
Sbjct: 5    YIKLSQRDHVLQRPDTYVGSVAKEAREEYVYTGDA--IVKKSVSYSPAFLKIFDEILTNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV ID +H  ++++N G  +PVE H EEG YVPELIFGHLLT  N+D
Sbjct: 63   ADCVNRGAPMTTLKVTIDADH--VTIYNDGCSIPVEKH-EEGCYVPELIFGHLLTGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS +F +E  DG R  KY Q +++NM   S+P ++K  + 
Sbjct: 120  DAQERTGAGRNGYGSKLTNIFSKKFDVEIYDGTR--KYLQTWSDNMTNASKPKVTKSSKP 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  +F PD  +F+M  +++D  +++ +RV D+A  L K VK+ L+G R+ VK   +Y
Sbjct: 178  GSIT-TTFYPDFERFSMDSIDEDTRSVLVRRVYDMAAVLTK-VKIFLDGKRLDVKGAKDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
             +MY + V    E V + W+I V  S+ +F+ VSFVN  +T +GGTHVD +AN VA  V 
Sbjct: 236  FEMYTE-VKPVFESV-DGWDIGVCPSD-EFRSVSFVNASST-RGGTHVDLIANAVAKAVA 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
                   K   VK   VKN L++FVNA + NP+F SQTK+ LT    S   KC  S  FL
Sbjct: 292  E--AALKKKVTVKPAVVKNKLFIFVNARVVNPSFSSQTKDILT----SKNVKCSPSVAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK  A S +++ +++  N ++S    K+LKK DG K   + GI KL DA  AG ++S  C
Sbjct: 346  KK--AVSAVLDDVIAETNVRESLVEMKNLKKTDGAKKVRLTGIKKLTDAAWAGTKHSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGRDR+G+FPLRGKLLNVR+AS + + NN+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRDRYGIFPLRGKLLNVRDASVSSITNNAEITAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +MIM+DQ                            D DGSHI 
Sbjct: 464  LRNGTTYKDASSLRYGSVMIMSDQ----------------------------DVDGSHIA 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
            GL++NF H+ +PSLL+IP FL  F+TPIV A  K  K++ FYS+PD+E WK +   + S+
Sbjct: 496  GLVLNFFHAQFPSLLEIPGFLKRFVTPIVVA-KKGTKMVEFYSIPDFEEWKAATP-DVST 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            W  KY+KGLGTS + + K YF N+ +  K   W DD   E+I+ +F+K + + RK WLL 
Sbjct: 554  WKTKYFKGLGTSDANDAKRYFNNLKVLVKTLTWSDDA-AESIDKSFNKSRADERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQK   I   DF+NK+LILFS  D++RSIPS+VDGLKP QRKILF +FKRN +
Sbjct: 613  FKPGNQLDQKLTKIPVEDFINKDLILFSRYDVERSIPSVVDGLKPSQRKILFSAFKRNLV 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
            +E KVAQF+GYVSEH+ YHHGE SL   I+GMAQD+VGSNNINLL P GQFG+R  GGKD
Sbjct: 673  QEIKVAQFAGYVSEHAGYHHGEASLQGAIVGMAQDYVGSNNINLLAPKGQFGSRLHGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            +ASARYIFT+LSP TR +F K D++LL+YL +DG +IEP +Y+P IP +LVNG+ GIGTG
Sbjct: 733  SASARYIFTQLSPNTRDIFHKADERLLNYLEDDGDRIEPEYYVPTIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNP++IV NV+RL+NG+ M  M PWY+ F G I++T+    GV +T  G+  E
Sbjct: 793  FSTNIPSYNPKEIVNNVKRLINGKPMTEMTPWYKNFKGDIKETS---PGV-FTCHGVY-E 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV-FLSEESMM 985
            +   T+ + ELP+  WT +Y+E++ES+I++       FR+  D+T V FE+ F+      
Sbjct: 848  IKGKTVTVSELPVGTWTNEYKEYIESLIEKK--IAADFREKHDETNVLFEIDFIGVPDP- 904

Query: 986  RTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQL 1045
                    K  KL +TI T+NMH FD +G IKKYD+P  I+ ++F  R EFY KRK+  L
Sbjct: 905  --------KILKLDSTIRTTNMHAFDPEGKIKKYDSPLDIITDWFATRKEFYIKRKEDLL 956

Query: 1046 ENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAG 1105
            ++L+  +L  +NK RFI  V +G +++  R   D++ +L +  F                
Sbjct: 957  KDLKARVLVAKNKSRFITSVNDGTLIITRRAEEDVIKDLNKMKF---------------- 1000

Query: 1106 ATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKAT 1165
                        + V+G     ++YLL M I +LT E+ + L A+   L EE+  L+  T
Sbjct: 1001 ------------DKVDG----SFEYLLGMKISSLTKERAEKLQAEAVTLEEELVVLKNTT 1044

Query: 1166 PESLWVKDLDAL 1177
             E +WV D+DA+
Sbjct: 1045 AEQMWVSDIDAI 1056


>gi|448927391|gb|AGE50965.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CVB-1]
          Length = 1058

 Score =  941 bits (2432), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/1148 (46%), Positives = 719/1148 (62%), Gaps = 103/1148 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ +HIL+RPDTY+GS+EK  +  +I++    T   + ++Y P   KIFDEILVN+
Sbjct: 5    YIKLSQRDHILIRPDTYVGSVEKELRNEYIFDGSKIT--KKDVTYSPAFLKIFDEILVNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV I +  D ISV+N G  +P+E   +EG+Y+PE+IFGHLL+  N+D
Sbjct: 63   ADCFNRGGAMTTLKVTISK--DSISVYNDGCSIPLE-KNDEGIYIPEMIFGHLLSGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS  F IE  DG    KY Q +++NM   S+  I+K  + 
Sbjct: 120  DTEERTGAGRNGYGSKLTNIFSKIFSIEIYDGSH--KYVQSWSDNMISVSKAKITKSSKA 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  SF PDLA+F M +++DD  +++ +RV D+A  LG SV+V L+G R+ VK+  +Y
Sbjct: 178  PSIT-TSFVPDLARFGMINIDDDTRSILVRRVYDMAAVLG-SVRVFLDGKRLEVKTPLDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
              +Y      F     + W I V     +F  VSFVN  A  +GGTHVD V N +A  V+
Sbjct: 236  FKLYTDEKVVFESA--DGWSIGVA-PANEFACVSFVNASAA-RGGTHVDAVVNSIAKAVV 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
               +KK     VK   VKN L+VFVNA + NP F SQTK+ LT R   F      S  FL
Sbjct: 292  EAASKKK--TIVKPAMVKNKLFVFVNAKVVNPTFSSQTKDILTSRNIKFSP----SAAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK T    +++ +++  N ++S    + LKK DG K   + GI KL DA  AG +NS  C
Sbjct: 346  KKATGL--VLDAVIAETNVRESLVDARLLKKTDGVKKTRLTGIKKLTDAAWAGTKNSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + +  N+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSIAANAEIVAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LQVGKTYKDASSLRYGSVMLMTDA----------------------------DVDGSHIS 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
             L++NF H+ +PSLL +P FL +F TPIV A+ +   +  FYS+PDYE+WK++   + + 
Sbjct: 496  ALVMNFFHAQFPSLLAVPGFLKKFSTPIVVAS-RGKDIKEFYSLPDYESWKKNTA-DCAK 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            WSIKY+KGLGTSTS++ K+YF+N+    K F W +D  GE I+ +F+K + + RK WLL 
Sbjct: 554  WSIKYFKGLGTSTSEDAKKYFKNLKSLVKIFGWTEDS-GELIDRSFNKSRPDERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQ +  I   DF++KELILFS  D++RSIPS+VDGLKP QRKILF +FKRN  
Sbjct: 613  FQPGNQLDQSKTNIPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAFKRNLT 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQFSGYV+EHS YHHGEQSL   I+GMAQD+VGSNN+NLL PNGQFG+R  GGKD
Sbjct: 673  NEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRLLGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            +ASARYIFT+LSP+TR +F + DD LL YL +DG  IEP WY+P IP +LVNG+ GIGTG
Sbjct: 733  SASARYIFTKLSPVTRQVFNQTDDVLLKYLEDDGSSIEPEWYVPAIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNP+DI+ NV+RL++G+ M PM PWY+GF GTI++  +     T+T  G + +
Sbjct: 793  FSTDIPSYNPKDIIDNVKRLISGKEMVPMTPWYKGFTGTIDQNDNG----TFTCKG-VAK 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            VN  ++ + ELP+  WT DY++FLE ++++    I  FR+   +  V FE+  S E  + 
Sbjct: 848  VNGKSVVVSELPVGTWTSDYKDFLEGLVEKK--VIVDFREKHTEKNVLFEIDFSGEPNIS 905

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                      KL   I T+NMH FD +G IKKY  P  I+ ++F IR EFY KRK   L+
Sbjct: 906  I--------LKLEKVIRTTNMHAFDPQGKIKKYAEPLDIIRDWFEIRREFYTKRKNYLLK 957

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L  +    ENK RFI  +VN E+V++ +  + +L ELR   F                 
Sbjct: 958  DLSHKAAIAENKHRFITLIVNDELVLSKKTESVILSELRTLKFY---------------- 1001

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
              ++E S              Y YLL M+I +LTLE+ + L  + +KL +E+  L   + 
Sbjct: 1002 --KSEGS--------------YKYLLDMSISSLTLERAEKLRIEAEKLKKELTILENTSK 1045

Query: 1167 ESLWVKDL 1174
              +W  DL
Sbjct: 1046 TQMWSDDL 1053


>gi|448936287|gb|AGE59835.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
            TN603.4.2]
          Length = 1066

 Score =  937 bits (2422), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/1162 (46%), Positives = 739/1162 (63%), Gaps = 109/1162 (9%)

Query: 24   NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
            N T+ + Y K SQ EH+L R DTY+GS+ K  +  ++Y  ++  ++ +++SY P   KIF
Sbjct: 8    NHTMADRYVKLSQREHVLHRADTYVGSVAKEAREEYVYTGDA--IVKKSVSYSPAFLKIF 65

Query: 84   DEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            DEIL N+AD   R   M  +KV ID +H  +++ N G  +PVE H EEG YVPELIFGHL
Sbjct: 66   DEILTNSADCFNRGAPMTTLKVTIDTDH--VTIFNDGCSIPVEKH-EEGCYVPELIFGHL 122

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LT  N+DD  ++T  GRNGYG+KLTNIFS +F +E  DG  + KY Q +++NM   S+P 
Sbjct: 123  LTGENFDDTQERTGAGRNGYGSKLTNIFSKKFDVEIYDG--VHKYIQSWSDNMTNASKPK 180

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            ++K  +  + T  +F PD  +F M  +++D  +++ +RV D+A  L K VK+ L+G R+ 
Sbjct: 181  VTKSSKPGSIT-TTFYPDFERFGMDSIDEDTRSVLVRRVYDMAAVLTK-VKIFLDGKRLD 238

Query: 264  VKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
            VK   +Y +MY ++   F E V + W+I V  S+ +F+ VSFVN  +T +GGTHVD VAN
Sbjct: 239  VKGAKDYFEMYTETKPVF-ESV-DGWDIGVCPSD-EFRSVSFVNASST-RGGTHVDLVAN 294

Query: 324  QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
             VA  V        K   VK   VKN L++FVNA + NP+F SQTK+ LT +      KC
Sbjct: 295  AVAKAVAE--AALKKKVTVKPAVVKNKLFIFVNARVVNPSFSSQTKDILTSKNV----KC 348

Query: 384  ELSEEFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAG 439
              S  FLKK  A S +++ +++  N ++S    K++KK DG K   + GI KL DA  AG
Sbjct: 349  SPSAAFLKK--AVSAVLDDVIAETNVRESLVEMKNMKKTDGAKKVRLTGIKKLTDAAWAG 406

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
             +NS  CTLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + + NN+EI 
Sbjct: 407  SKNSGLCTLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSITNNAEIV 466

Query: 500  NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
             IK+ILGL+ G  Y +  SLRYG +M+MTD                             D
Sbjct: 467  AIKQILGLRNGTTYKDASSLRYGSVMLMTDA----------------------------D 498

Query: 560  HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS-FYSMPDYEAWKE 618
             DGSHI GL++NF H+ +PSLL+IP FL +F TPIV A  K GK +  FYS+PD+E WK+
Sbjct: 499  VDGSHIAGLVLNFFHAQFPSLLEIPGFLKKFTTPIVIA--KRGKDMKEFYSLPDFEDWKK 556

Query: 619  SLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIE 678
            + G     WS+KY KGLGTSTS++ K YF+N+    K F W DD   E I+ +F+K + +
Sbjct: 557  TSG---DKWSVKYLKGLGTSTSEDAKRYFKNLKGLTKVFGWTDDS-SELIDRSFNKSRAD 612

Query: 679  ARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 738
             RK WLL FEPGN LDQ    I   DF+NKELILFS  D++RSIPS+VDGLKP QRKILF
Sbjct: 613  ERKTWLLDFEPGNQLDQTLTKIPVDDFLNKELILFSRYDVERSIPSVVDGLKPSQRKILF 672

Query: 739  CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFG 798
             +F+RN   E KVAQF+GY SEH+ YHHGE SL   I+GMAQD+VGSNNINLL P GQFG
Sbjct: 673  SAFRRNLTSEIKVAQFAGYTSEHAGYHHGEASLQGAIIGMAQDYVGSNNINLLAPKGQFG 732

Query: 799  TRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVN 858
            +R  GGKD+ASARYIFT+LSP TR +F K D++LL+YL EDG +IEP +Y+P IP +LVN
Sbjct: 733  SRLHGGKDSASARYIFTQLSPNTRDIFHKADERLLNYLEEDGDKIEPEYYVPTIPFLLVN 792

Query: 859  GSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTY 918
            G+ GIGTG+S+ IP+YNP++I+ NV+RL++G+ M PM PWYRGF GTI + +    GV +
Sbjct: 793  GANGIGTGFSTNIPSYNPKEIIDNVKRLIDGKPMVPMTPWYRGFKGTIVEAS---PGV-F 848

Query: 919  TVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV- 977
            T +G+   +    + + ELP+  WT DY+E+LE++I++    +  FR+  D+T V FE+ 
Sbjct: 849  TCSGVY-SMKGKMVTVSELPVGTWTNDYKEYLETLIEKK--IVADFREKHDETNVLFEID 905

Query: 978  FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFY 1037
            F+              K  KL +TI T+NMH FDS+G IKKYDTP  I+ ++F  R EFY
Sbjct: 906  FIGVPDP---------KILKLESTIRTTNMHAFDSRGKIKKYDTPMDIITDWFTTRKEFY 956

Query: 1038 EKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSK 1097
             KRK+  L++L+  +L  +NK RFI  V +G +V+  R   D++ +L   G   F K  K
Sbjct: 957  IKRKEDMLKDLKARVLVAQNKSRFITNVNDGMLVITRRVEEDVIKDL---GKLKFDKVDK 1013

Query: 1098 SIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEE 1157
            S                             +DYLL M I +LT E+ + L A+   L EE
Sbjct: 1014 S-----------------------------FDYLLGMKISSLTKERAEKLQAEAAALEEE 1044

Query: 1158 VDDLRKATPESLWVKDLDALDM 1179
            +  L   + E++WV D++A+ M
Sbjct: 1045 LVILESTSTEAMWVNDIEAIKM 1066


>gi|302422958|ref|XP_003009309.1| DNA topoisomerase [Verticillium albo-atrum VaMs.102]
 gi|261352455|gb|EEY14883.1| DNA topoisomerase [Verticillium albo-atrum VaMs.102]
          Length = 1688

 Score =  936 bits (2420), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/1234 (42%), Positives = 738/1234 (59%), Gaps = 142/1234 (11%)

Query: 20   PTAP-------NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRT 72
            P+AP        KT+EE YQK +QLEHI+ RPDTYIGS+E+    +W+Y +E++ M  R 
Sbjct: 108  PSAPAPAVKGTKKTVEETYQKLTQLEHIVKRPDTYIGSVERTEMPMWVYNKETQLMEFRK 167

Query: 73   ISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEG 132
            ++ VPGLYKIFDEILV                             N+ D   +++ +EE 
Sbjct: 168  VTTVPGLYKIFDEILV-----------------------------NAAD---IKVRREES 195

Query: 133  VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVF 192
               P     H+    N D    + +   NG G            I     K+   Y   +
Sbjct: 196  GEEP---VTHIKV--NIDREAGQISIENNGKG------------IPVEMHKQHGIY--TW 236

Query: 193  TNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKS 252
            T+NM K  +  I+  K  D + +++FKPD  +F+M  ++DD+ AL+ +RV D+AG + K 
Sbjct: 237  TDNMSKMGKAKITSSKSSD-FVRITFKPDFKRFSMEGIDDDLEALLYRRVYDMAGTI-KG 294

Query: 253  VKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE-----------------RWEICVTL 295
            +KV LNG  V   +F  Y +MY K++ +  ER +E                 RW++  T+
Sbjct: 295  IKVHLNGTVVKPSAFKGYSEMYAKAIAK--ERASEEGGEPKVTVEMDKNDNPRWDVGFTV 352

Query: 296  SEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFV 355
            S+G FQ +SFVN IAT  GGTHV+YVA+Q+  ++   ++KK K   +K  +++NH++VF+
Sbjct: 353  SDGSFQHISFVNNIATTSGGTHVNYVADQIVQYLTKYLDKKKKGHALKPQHIRNHIFVFI 412

Query: 356  NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
            N  I+NP+F+SQTKE +T + SSFGSKC LSE FLKKV A S  ++ ++S+A  K  K +
Sbjct: 413  NCRIENPSFNSQTKEQMTTKISSFGSKCVLSEAFLKKVAA-SDAIQNIMSFAEKKADKMM 471

Query: 416  KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVF 475
             K+DG +   +   +KL DANLAG +   +CTLILTEGDSAK+LA+AG +++  DR GVF
Sbjct: 472  AKSDGNRRSRINN-AKLVDANLAGTKRGHECTLILTEGDSAKSLAVAGRAILDPDRIGVF 530

Query: 476  PLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAP 535
            PLRGK+LNVR+AS  Q+  N EI NIK+ LGLK    Y + K LRYGHLMIM DQ     
Sbjct: 531  PLRGKMLNVRDASIEQITKNQEIQNIKQFLGLKHKQNYTDTKGLRYGHLMIMADQ----- 585

Query: 536  LSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIV 595
                                   DHDGSHIKGLLINF+   +PSLL+IP F  EFITPIV
Sbjct: 586  -----------------------DHDGSHIKGLLINFLQVQYPSLLQIPDFFREFITPIV 622

Query: 596  KA-TNKNGK----VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNI 650
            K    KN K    + +F++ P YE WKE+     S W  KYYKGLGTS++++ + YF N+
Sbjct: 623  KVWQGKNPKNPQKLQAFFTQPQYEEWKEAHKNEISRWEYKYYKGLGTSSNEDAQVYFTNL 682

Query: 651  TLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKEL 710
              H K+F      + +  +LAFSKKK +ARK+WL  F PG +LD   K I Y DFVN+EL
Sbjct: 683  DDHLKEFDTMQSSEADLFDLAFSKKKADARKEWLGNFVPGTYLDHSTKSITYDDFVNREL 742

Query: 711  ILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQS 770
            ILFSMAD  RSIPS++DGLKPGQRK++F  FKRN  K+ KV + +GYVSE +AYHHGE S
Sbjct: 743  ILFSMADNMRSIPSVLDGLKPGQRKVMFACFKRNLTKDQKVVELAGYVSEKAAYHHGEMS 802

Query: 771  LASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDD 830
            L  TI+G+AQ+FVGSNN+N L+P+G FG+R  GG DAAS RYI TRLSP  R +F   D+
Sbjct: 803  LQQTIIGLAQNFVGSNNVNCLEPSGNFGSRLAGGSDAASPRYIHTRLSPFARKIFSVLDE 862

Query: 831  KLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-- 888
              L+   EDG+ IEP  Y PIIP VL NG++GIGTGWS+ IPNY+P +IV  ++R +   
Sbjct: 863  PNLEVQMEDGKPIEPKVYAPIIPMVLCNGADGIGTGWSTSIPNYHPMEIVRAIKRRMGRL 922

Query: 889  ------GEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNET-TLRIKELPIRR 941
                  G+  E M PW+RG+ GT E  A K+    Y   GI E  ++T  + IKELPIR 
Sbjct: 923  DSDDTEGKPFETMMPWFRGWKGTPE-PAEKD---RYKFNGIYETDDKTGEIIIKELPIRM 978

Query: 942  WTQDYREFLESIID--QNDSFIRGFRQYSDDTTVDFEVFLSEESM--MRTKQEGLLKKFK 997
            WT D++  LE +I   +  ++I+ +++++D   V+F + L E+    +    EG++ +FK
Sbjct: 979  WTDDFKAKLEEVISGAKGPAWIKDYKEFNDHKNVNFVIQLDEKHYKDIHKTHEGIMDRFK 1038

Query: 998  LTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLEN 1057
            L   ++TSN+  FDS G I+KY+  E ILEEF+  RL+ Y  RKK  L     +  KL+N
Sbjct: 1039 LNKQVATSNLVAFDSTGRIRKYEKVEDILEEFYVYRLDMYSARKKHWLGVYHSDYRKLKN 1098

Query: 1058 KVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENP 1117
            + RFI  +++GE++V+ +++  L+ ELR + +  FPKN    +A      ++ + S+   
Sbjct: 1099 QARFIQEIIDGELIVSKKRKPVLVQELRDRKYEAFPKNDGKKQATT--EEEDMDASDNED 1156

Query: 1118 EVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            + V G  + DYDYLLS+ I +LTLE+++ L +   K   E D L   + + LW +DLD  
Sbjct: 1157 DSVGG--AADYDYLLSLPIWSLTLERLERLNSAIMKKKGEHDALLAQSEKDLWCQDLDEF 1214

Query: 1178 ----DMQLDELDKSDA---RAEEERMKIKGNGNG 1204
                + QL+  DK  +   R    R +  G G G
Sbjct: 1215 TEEWEAQLEMDDKIQSKINRMGRRRSRKIGAGGG 1248


>gi|40804952|gb|AAR91744.1| topoisomerase II [Trichomonas vaginalis]
          Length = 1458

 Score =  935 bits (2417), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/1246 (42%), Positives = 744/1246 (59%), Gaps = 113/1246 (9%)

Query: 28   EEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEIL 87
            +E Y K +  EH+L RPD+YIGSIE     +W+  E+ K    R ISYVPGLYKIFDEIL
Sbjct: 14   DEQYVKLTHREHVLTRPDSYIGSIEPRECKMWVCNEDGK-FEFREISYVPGLYKIFDEIL 72

Query: 88   VNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEG----VYVPELIFGHL 143
            VNAADNKQRDP +  +K  +D   + ISV N G G+  +           Y+PE IF  L
Sbjct: 73   VNAADNKQRDPPLTTIKGEVDPAQNRISVWNDGKGISTQKQFSPNDNCEYYIPEFIFSQL 132

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LTSSNY+D  +K TGGRNGYGAKL NIFS +F I   +      Y+Q  T+NM     P 
Sbjct: 133  LTSSNYNDKQEKVTGGRNGYGAKLANIFSKKFHINIYNADEGINYQQTITDNMTNIQPPK 192

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            +   K   ++T++SF PDL +FN+  +  D V L+++RV DLA  L K VK+  NG++VP
Sbjct: 193  LKNGKGKGSYTEISFWPDLERFNLQTITKDHVDLIRRRVYDLADILPK-VKIFWNGNQVP 251

Query: 264  VKSFAEYVDMYPKSVTR--FHERVNER---WEICVTLSEG-QFQQVSFVNGIATIKGGTH 317
            +K + +Y  +Y K   +    E  NE+   W+I V  S+  +FQQ+SFVN +AT  GGTH
Sbjct: 252  IKKWEDYCKVYLKEDVKPLVCEVKNEKGYTWKIGVAPSKSREFQQISFVNCVATSNGGTH 311

Query: 318  VDYVANQVANHVMAVV-NKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            VD V NQ+  ++   + N+++     K   VKN L+VFV++L+ NP+FDSQTKE LTL Q
Sbjct: 312  VDVVVNQITKYITDYLKNRRSGKVETKPSVVKNFLYVFVDSLVINPSFDSQTKERLTLDQ 371

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
                  C+L + FL K+  K+ IV  +  +ANFK+ + +    GTK   +  I+KLEDAN
Sbjct: 372  KKLKDDCKLPDNFLDKI-LKTDIVALVTEYANFKEQRKVANMKGTKKGRLI-INKLEDAN 429

Query: 437  LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
            +AG   S +CTLILTEGDSAKA A+ GL+ +GRD +GVFPLRGKLLN R+ S+ ++  N 
Sbjct: 430  MAGKAESLKCTLILTEGDSAKATAVTGLATIGRDYYGVFPLRGKLLNTRDISAKKLSEND 489

Query: 497  EIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            EI NI KI+GL    +Y N   +K LRYG +MIM D                        
Sbjct: 490  EIQNIIKIMGLDPMEKYENDDSMKRLRYGSIMIMAD------------------------ 525

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK--VLSFYSMP 611
                QD DGSHIKGL+INF+HS WP+LLK  +F+ EFITPIVK T  N K   +SF+++P
Sbjct: 526  ----QDVDGSHIKGLIINFVHSMWPNLLKKRNFITEFITPIVKVTKGNNKKGAISFFTIP 581

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            ++  WK +   N   + +KYYKGL TST++E KEYF NI+ HKK F++ ++ D E I LA
Sbjct: 582  EFSQWKAA-NNNGKGYKMKYYKGLATSTAEEAKEYFSNISKHKKVFIYTNENDEERINLA 640

Query: 672  FSKKKIEARKKWLLQFEPG-NHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            F+KK+ + RK WL Q +    +L  K+ +IKYSDFV+KELILFS     R+IPS +DG K
Sbjct: 641  FAKKRADDRKNWLAQLDANETYLGTKDTHIKYSDFVDKELILFSSYANYRAIPSSIDGWK 700

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRKIL+   K N   + KVAQ SG VSE +AYHHGE SL  TI+GM QDFVGSNNIN+
Sbjct: 701  PGQRKILWVCLKNNIKNDLKVAQLSGKVSEQAAYHHGEASLNETIIGMCQDFVGSNNINV 760

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
             QP G  GTR  GG+D+ S RY++T L  ITR +F K+DD LL Y  ++G  IEP  Y+P
Sbjct: 761  FQPIGMLGTRLAGGEDSGSPRYVYTALEKITRTIFMKEDDDLLTYNTDEGLPIEPVTYIP 820

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI---- 906
            IIP VLVNG++GIG GWSS +P Y P+DI+ N+RR +N E M  M PWY GF G I    
Sbjct: 821  IIPMVLVNGAKGIGVGWSSEVPQYCPQDIIDNLRRKMNDEPMVEMTPWYSGFTGKIIPIQ 880

Query: 907  -EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI------------ 953
              K   K+  V +   GI++++++TT+ I E     WT DY++FLE +            
Sbjct: 881  VIKDGVKQPIVKWESRGIVKKIDDTTIEITEFTNGIWTYDYKKFLEGLTVGESLNPHKKL 940

Query: 954  -----------------------IDQND---------SFIRGFRQYSDDTTVDFEVFLSE 981
                                   ++Q D           I  FR+Y  + +V F + + +
Sbjct: 941  ADRKAAAAKAKRTKKKAAAGDDPVEQADVEEKVNLGGPKISEFREYHTNVSVHFIITVDD 1000

Query: 982  ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
              M   +  GL + FKL ++I+ +NM LF+++  I ++++P  I+ +++ +R+++YE+R 
Sbjct: 1001 SQMREIESVGLREFFKLKSSITATNMTLFNAQNKIVQFNSPLDIINDYYPVRMKYYEERH 1060

Query: 1042 KVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF-----PKNS 1096
            +  ++ L+L+  KL N+ RFI  V+ G I VN   R  +L  L +  +  +      K  
Sbjct: 1061 RYLIDALQLQYKKLSNQARFIREVIAGIIKVNGVPRATILAALERGNYDLYDDKELTKRI 1120

Query: 1097 KSIEAVVAGATDETE-----ESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADR 1151
            K  + V+    +E E     +SE N + +  ++   YDYLL+M I TLT EK   L  + 
Sbjct: 1121 KFADEVIQQHNEEEEEQNEFKSESNADHLALLEK-GYDYLLAMKIWTLTKEKADKLDDEA 1179

Query: 1152 DKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMK 1197
             K N+E++++ K  P   + +DLD  +++       +A+ E+ R++
Sbjct: 1180 KKKNQELEEMLKKKPIDFYKEDLDKFEVEWKAF---EAKREKTRLE 1222


>gi|357441041|ref|XP_003590798.1| Defensin/CCP-like protein [Medicago truncatula]
 gi|355479846|gb|AES61049.1| Defensin/CCP-like protein [Medicago truncatula]
          Length = 1176

 Score =  930 bits (2404), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 542/1146 (47%), Positives = 712/1146 (62%), Gaps = 132/1146 (11%)

Query: 42   LRPDTYIGSIE--KHTQAL-----WIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
            + P+ +I  ++  K+T  L     W+YE +   +IHR ISYVPGLY IFD IL++AAD K
Sbjct: 1    MTPNIFIPFLQPRKYTHTLVFRKQWVYENDK--IIHRKISYVPGLYNIFDIILIHAADRK 58

Query: 95   QRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVK 154
            +RDP MD ++V I  E + I V+  G              VP      LL    +D+ +K
Sbjct: 59   RRDPYMDRLEVNIIPEVNEIYVYMKG--------------VP------LLGDETFDNVIK 98

Query: 155  KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKC---KEGD 211
            K            TN++S+   +E ADG+R   + Q F N     + P  +KC    +  
Sbjct: 99   KFHP---------TNLYSSYCYVEIADGQRF--WSQEFHN-----ATPVATKCFNLCDNG 142

Query: 212  NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             WT V FKPDL KF+M +LE DV+ALMKKRV+D+A CLG++V V LNG  +PVKSF +Y 
Sbjct: 143  KWTNVMFKPDLDKFDMKNLEKDVIALMKKRVLDMAVCLGETVTVVLNGTVIPVKSFKDYA 202

Query: 272  DMY-----PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVA 326
            + +     P  + R H ++ +R EIC++LS+G+FQQVSFVN IATIKGGTHVDY+  Q+ 
Sbjct: 203  NFFLDRAKPFPLPRTHAKLGDRLEICLSLSDGKFQQVSFVNSIATIKGGTHVDYITKQIT 262

Query: 327  NHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELS 386
             ++   V KK K+ NV A  VKN LWVFVNALIDNPAF+SQTKE LT + +  G K    
Sbjct: 263  TYIKKEVLKK-KHVNVNADTVKNQLWVFVNALIDNPAFNSQTKEMLTTKPARLGLKF-FP 320

Query: 387  EEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
               L  V  KS I++ LL    FK    +                  DA LAG  +S +C
Sbjct: 321  GSMLNDV-QKSQILDNLLPRIPFKHRTHV------------------DAKLAGRPDSGKC 361

Query: 447  TLILTEGDSAKALAMAGLS-VVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKIL 505
            TLILT+G   K LAM+GLS VV  D +GVFPL  KLLN     S ++    EI N+  IL
Sbjct: 362  TLILTQGQYVKDLAMSGLSAVVDPDLYGVFPLSSKLLNATR-DSRKLFKKKEIQNLMAIL 420

Query: 506  GLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
            GL +  +Y+N K LRYG LM+M +Q                            D DG+H 
Sbjct: 421  GLVRNKKYSNAKCLRYGQLMVMANQ----------------------------DEDGAHF 452

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATN-KNGKVLSFYSMPDYEAWKESLGGNA 624
            KGLLINF +SFWPSLLK+  F+  F  PI+KA++ K GK LSF SM  YE WK+ LG  A
Sbjct: 453  KGLLINFFYSFWPSLLKVSKFMSVFTFPIIKASDSKKGKELSFDSMQQYEDWKKELGNTA 512

Query: 625  SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
            + W IKY +GL  S+++E +EYFQ++  H+  FVW DD+D  +I+LAFSKK  E  + W+
Sbjct: 513  NDWEIKYCQGL--SSAQEVREYFQDLGKHRAYFVW-DDKDETSIKLAFSKKA-EEWEAWI 568

Query: 685  LQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRN 744
               +PG   + + K I Y +FVNKEL+  SM +LQRSIPS+VDGL  GQRK LFCSF+ N
Sbjct: 569  GNSQPGT-CNYERKVINYRNFVNKELLFSSMKNLQRSIPSVVDGLTLGQRKTLFCSFEMN 627

Query: 745  FIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGG 804
              K+ +V + + YV+EHS  H+G+QS+ASTI+GMAQDFVGSNNINLL P GQFGTR+ GG
Sbjct: 628  LTKQTEVCRLTAYVTEHSYCHYGQQSIASTIIGMAQDFVGSNNINLLIPYGQFGTRDLGG 687

Query: 805  KDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIG 864
            KD AS+R ++ +L+ +TR LFP DDDKLL+YLNEDG+ I+P WY+PIIP VLVNG   +G
Sbjct: 688  KDHASSRKLYIKLNCVTRLLFPVDDDKLLEYLNEDGRSIQPNWYIPIIPLVLVNGCHAMG 747

Query: 865  TGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGII 924
            T +SS IP Y+P +I+ NVRR LN E M  M PWY+GFGGTIEK+A K  G  YTV G++
Sbjct: 748  TCFSSDIPKYHPYEIIKNVRRFLNNEEMVSMKPWYKGFGGTIEKSA-KGIGY-YTVDGLV 805

Query: 925  EEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESM 984
            E +NE T RIKELPIR WT+DY++FLE I  +    I  FRQ  D   V+F+V + +E +
Sbjct: 806  ERINEQTFRIKELPIRMWTEDYKKFLEKITAR--GLIESFRQKGDYEIVNFKVNVKQEEI 863

Query: 985  MRT-KQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKV 1043
                K E L KKF LT TISTSNM+LFD++G IKKY+TPEQILEEF  +RL++Y +RK+ 
Sbjct: 864  ATIEKDEELRKKFNLTCTISTSNMYLFDAEGKIKKYNTPEQILEEFCTLRLKYYVRRKQY 923

Query: 1044 QLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVV 1103
             ++N    L  L  K +FI  +VN +    NR R +LL+E+ +KG        KS E  V
Sbjct: 924  LVKNFTQLLRSLRIKQKFISNIVNEKFNPINR-RAELLIEILKKG--------KSAEPHV 974

Query: 1104 AGATDETEESEENPEVVNGVQSI--------DYDYLLSMAIGTLTLEKVQGLLADRDKLN 1155
            AGA D + + +E  E  +  QS+        DY+YL S+     TLE ++ L A+ D+  
Sbjct: 975  AGAIDYSSKEQEAGEQESVSQSVSIEGATLGDYEYLSSLPFENFTLESLKKLEAELDEKE 1034

Query: 1156 EEVDDL 1161
             E+  L
Sbjct: 1035 NELKTL 1040


>gi|448926664|gb|AGE50240.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus Canal-1]
          Length = 1058

 Score =  930 bits (2403), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/1155 (46%), Positives = 731/1155 (63%), Gaps = 107/1155 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ +HIL R DTY+GS+ K  +   +Y  ++  ++ +++SY P   KIFDEIL N+
Sbjct: 5    YVKLSQRDHILHRSDTYVGSVAKEAREESVYTGDA--IVKKSVSYSPAFLKIFDEILTNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV ID +H  +++ N G  +P+E H +EG YVPELIFGHLLT  N+D
Sbjct: 63   ADCFNRGAPMTTLKVTIDADH--VTIFNDGCSIPIEKH-DEGCYVPELIFGHLLTGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS +F +E  DG    KY Q +++NM   S+P ++K  + 
Sbjct: 120  DTQERTGAGRNGYGSKLTNIFSKKFDVEIFDGAH--KYIQSWSDNMTNASKPKVTKSSKP 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  +F PD  +F M+ +++D  +++ +RV D+A  L K VK+ L+G R+ VK   +Y
Sbjct: 178  GSIT-TTFYPDFERFGMSSIDEDTRSVLVRRVYDMAAVLTK-VKIFLDGKRLDVKGAKDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
             +MY  +   F     + W+I V  S+ +F+ VSFVN  +T +GGTHVD VAN VA  V 
Sbjct: 236  FEMYTNAKPVFE--TADGWDIGVCPSD-EFRSVSFVNASST-RGGTHVDLVANAVAKAVA 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
                   K   VK   VKN L+VFVNA + NP+F SQTK+ LT +      KC  S  FL
Sbjct: 292  E--AALKKKVIVKPAVVKNKLFVFVNARVVNPSFSSQTKDILTSKNV----KCSPSAAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK  A S +++ +++  N ++S    K+LKK DG K   + GI KL DA  AG ++S  C
Sbjct: 346  KK--AVSAVLDDVIAETNVRESLVEMKNLKKTDGAKKVRLTGIKKLTDAAWAGTKHSGMC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLN R+AS + + NN+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNARDASVSSITNNAEITAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +MIM+DQ                            D DGSHI 
Sbjct: 464  LRNGTNYKDASSLRYGSVMIMSDQ----------------------------DVDGSHIA 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
            GL++NF H+ +PSLL+IP FL  F+TPIV A  K  K++ FYS+PD+E WK S   + S+
Sbjct: 496  GLVLNFFHAQFPSLLEIPGFLKRFVTPIVVA-KKGTKMVEFYSIPDFEEWKSSTP-DVST 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            W  KYYKGLGTS + + K YF N+ +  K   W DD   E+I+ +F+K + + RK WLL 
Sbjct: 554  WKTKYYKGLGTSDANDAKRYFNNLKVLVKTLTWSDDA-AESIDKSFNKSRADERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            FEPGN LDQK   I   DF+NK+LILFS  D++RSIPS+VDGLKP QRKILF +FKRN  
Sbjct: 613  FEPGNQLDQKLTKIPVEDFINKDLILFSRYDVERSIPSVVDGLKPSQRKILFSAFKRNLT 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQF+GYVSEH+ YHHGE SL   I+ +AQD+VGSNNINLL P GQFG+R  GGKD
Sbjct: 673  SEIKVAQFAGYVSEHAGYHHGEASLQGAIVSIAQDYVGSNNINLLVPKGQFGSRLHGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            +ASARYIFT+LSP TR +F K D++LL+YL +DG +IEP +Y+P IP +LVNG+ GIGTG
Sbjct: 733  SASARYIFTQLSPNTRDIFHKADERLLNYLEDDGDKIEPEYYVPTIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNP+DIV NV+RL++G+ M PM PWY+GF G I++T+    GV +T  G+  E
Sbjct: 793  FSTNIPSYNPKDIVDNVKRLIDGKPMTPMTPWYKGFKGAIKETS---PGV-FTCHGVY-E 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            +   T+ + ELP+  WT DY+EF+E+++++    +  FR+  D+  V FE+  +      
Sbjct: 848  IKGKTVTVSELPVGTWTNDYKEFIETLVEKK--IVADFREKHDEKHVLFEIDFT------ 899

Query: 987  TKQEGL--LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQ 1044
                G+   K  KL  TI T+NMH FD  G IKKYDTP  I+ ++F  R +FY KRK+  
Sbjct: 900  ----GVPDPKILKLEGTIRTTNMHAFDPAGKIKKYDTPLDIIADWFSTRKKFYVKRKEDM 955

Query: 1045 LENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVA 1104
            L++L+  +L  +NK RFI  V +G +V+  R   D++ +L++  F               
Sbjct: 956  LKDLKARVLVAQNKSRFINSVNDGTLVITRRAEDDVVKDLKKMKF--------------- 1000

Query: 1105 GATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKA 1164
               D+ + S              YDYLL M I +LT E+ + L A+   L EE+  L+  
Sbjct: 1001 ---DKVDGS--------------YDYLLGMKISSLTKERAEKLRAEAAALEEELVVLQNT 1043

Query: 1165 TPESLWVKDLDALDM 1179
            T  S+WV D+D++ M
Sbjct: 1044 TTGSMWVSDIDSIKM 1058


>gi|448934185|gb|AGE57739.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus NTS-1]
          Length = 1066

 Score =  928 bits (2399), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 541/1159 (46%), Positives = 734/1159 (63%), Gaps = 107/1159 (9%)

Query: 24   NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
            N T+   Y K SQ +HIL R DTY+GS+ K  +  ++Y  ++  ++ +++SY P   KIF
Sbjct: 8    NHTMASRYVKLSQRDHILHRSDTYVGSVAKEAREEYVYTGDA--IVKKSVSYSPAFLKIF 65

Query: 84   DEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            DEIL N+AD   R   M  +KV ID +H  ++++N G  +PVE H EEG YVPELIFGHL
Sbjct: 66   DEILTNSADCFNRGAPMTTLKVTIDTDH--VTIYNDGCSIPVEKH-EEGCYVPELIFGHL 122

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LT  N+DD  ++T  GRNGYG+KLTNIFS +F +E  DG R  KY Q +++NM   S+P 
Sbjct: 123  LTGENFDDAQERTGAGRNGYGSKLTNIFSKKFDVEIYDGTR--KYLQTWSDNMTNASKPK 180

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            ++K  +  + T  +F PD  +F M  +++D  +++ +RV D+A  L K VK+ L+G R+ 
Sbjct: 181  VTKSSKPGSIT-TTFYPDFERFGMDLIDEDTRSVLVRRVYDMAAVLTK-VKIFLDGKRLD 238

Query: 264  VKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
            VK   +Y +MY   V    E V + W+I V  S+ +F+ VSFVN  +T +GGTHVD +AN
Sbjct: 239  VKGAKDYFEMYT-DVKIVFESV-DGWDIGVCPSD-EFRSVSFVNASST-RGGTHVDLIAN 294

Query: 324  QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
             VA  V        K   VK   VKN L++FVNA + NP+F SQTK+ LT    S   KC
Sbjct: 295  AVAKAVAE--AALKKKVTVKPAVVKNKLFIFVNARVVNPSFSSQTKDILT----SKNVKC 348

Query: 384  ELSEEFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAG 439
              S  FLKK  A S +++ +++  N ++S    K+LKK DG K   + G+ KL DA  AG
Sbjct: 349  SPSVAFLKK--AVSAVLDDVIAETNVRESLVEMKNLKKTDGAKKVRLTGVKKLTDAAWAG 406

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
             +NS  CTLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + + NN+EI 
Sbjct: 407  SKNSGLCTLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSITNNAEIV 466

Query: 500  NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
             IK+ILGL+ GV Y +  SLRYG +M+MTD                             D
Sbjct: 467  AIKQILGLRNGVNYKDASSLRYGSVMLMTDA----------------------------D 498

Query: 560  HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS-FYSMPDYEAWKE 618
             DGSHI GL++NF H+ +PSLL+IP FL +F TPIV A  K GK +  FYS+PD+E WK+
Sbjct: 499  VDGSHIAGLVLNFFHAQFPSLLEIPGFLKKFTTPIVIA--KRGKDMKEFYSLPDFEDWKK 556

Query: 619  SLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIE 678
            + G     WS+KY KGLGTSTS++ K YF+N+    K F W DD   E I+ +F+K + +
Sbjct: 557  TSG---DKWSVKYLKGLGTSTSEDAKRYFKNLKGLTKVFGWTDDS-SELIDRSFNKSRAD 612

Query: 679  ARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 738
             RK WLL FEPGN LDQ    I   DF++KELILFS  D++RS+PS+VDGLKP QRKILF
Sbjct: 613  ERKTWLLNFEPGNQLDQTLTKIPVDDFIDKELILFSRYDVERSVPSVVDGLKPSQRKILF 672

Query: 739  CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFG 798
             +FKRN   E KVAQF+GYVSEH+ YHHGE SL   I+ MAQD+VGSNNINLL P GQFG
Sbjct: 673  SAFKRNLTSEIKVAQFAGYVSEHAGYHHGEASLQGAIVAMAQDYVGSNNINLLMPKGQFG 732

Query: 799  TRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVN 858
            +R  GGKD+ASARYIFT+LSP TR +F K D++LL+YL +DG +IEP +Y+P IP +LVN
Sbjct: 733  SRLHGGKDSASARYIFTQLSPNTRDIFHKADERLLNYLEDDGDKIEPEYYVPTIPMILVN 792

Query: 859  GSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTY 918
            G+ GIGTG+S+ IP+YNP+DIV NV+RL+NG+ M  M PWYRGF G I++T+    GV +
Sbjct: 793  GANGIGTGFSTNIPSYNPKDIVDNVKRLINGKAMTEMTPWYRGFKGDIKETS---PGV-F 848

Query: 919  TVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVF 978
            T +G+  ++   T+ + ELP+  WT +Y+E LE +I++    +  FR+  D+  V FE+ 
Sbjct: 849  TCSGVY-DIKGKTVTVSELPVGTWTSEYKEQLEILIEKK--IVADFREKHDEKNVLFEI- 904

Query: 979  LSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYE 1038
                    T    +L   KL +TI T+NMH FD    I+KY +P  I+ ++F +R EFY 
Sbjct: 905  ----DFTGTPDPKIL---KLESTIRTTNMHAFDKNSGIRKYGSPLDIITDWFEVRKEFYV 957

Query: 1039 KRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKS 1098
            KRK+  L++L+  +L  +NK RFI  V +G +V+  R   D++ +L   G   F K  KS
Sbjct: 958  KRKEDLLKDLKARVLVAQNKSRFITSVNDGTLVITRRAEEDVIKDL---GKLKFDKVDKS 1014

Query: 1099 IEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEV 1158
                                         +DYLL M I +LT E+ + L A+   L EE+
Sbjct: 1015 -----------------------------FDYLLGMKISSLTKERAEKLQAEAAALEEEL 1045

Query: 1159 DDLRKATPESLWVKDLDAL 1177
              L+  T E++WV D+DA+
Sbjct: 1046 VVLQNTTTETMWVNDIDAI 1064


>gi|448936620|gb|AGE60167.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus WI0606]
          Length = 1056

 Score =  927 bits (2395), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 536/1152 (46%), Positives = 732/1152 (63%), Gaps = 107/1152 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ +H+L RPDTY+GS+ K  +  ++Y  ++  ++ +++SY P   KIFDEIL N+
Sbjct: 5    YIKLSQRDHVLQRPDTYVGSVAKEAREEYVYTGDA--IVKKSVSYSPAFLKIFDEILTNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV ID +H  ++++N G  +PVE H EEG YVPELIFGHLLT  N+D
Sbjct: 63   ADCFNRGAPMTTLKVTIDTDH--VTIYNDGCSIPVEKH-EEGCYVPELIFGHLLTGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS +F +E  DG R  KY Q +++NM   S+P ++K  + 
Sbjct: 120  DAQERTGAGRNGYGSKLTNIFSKKFDVEIYDGTR--KYLQTWSDNMTNASKPKVTKSSKP 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  +F PD  +F+M  +++D  +++ +RV D+A  L K VK+ L+G R+ VK   +Y
Sbjct: 178  GSIT-TTFYPDFERFSMDSIDEDTRSVLVRRVYDMAAVLTK-VKIFLDGKRLDVKGAKDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
             +MY   V    E V + W+I V  S+ +F+ VSFVN  +T +GGTHVD +AN VA  V 
Sbjct: 236  FEMYT-DVKIVFESV-DGWDIGVCPSD-EFRSVSFVNASST-RGGTHVDLIANAVAKAVA 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
                   K   VK   VKN L++FVNA + NP+F SQTK+ LT +      KC  S  FL
Sbjct: 292  E--AALKKKVTVKPAVVKNKLFIFVNARVVNPSFSSQTKDILTSKNV----KCSPSVAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK  A S +++ +++  N ++S    K+LKK DG K   + G+ KL DA  AG +NS  C
Sbjct: 346  KK--AVSAVLDDVIAETNVRESLVEMKNLKKTDGAKKVRLTGVKKLTDAAWAGSKNSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + + NN+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSITNNAEIVAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ GV Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LRNGVNYKDASSLRYGSVMLMTDA----------------------------DVDGSHIA 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS-FYSMPDYEAWKESLGGNAS 625
            GL++NF H+ +PSLL+IP FL +F TPIV A  K GK +  FYS+PD+E WK++ G    
Sbjct: 496  GLVLNFFHAQFPSLLEIPGFLKKFTTPIVIA--KRGKDMKEFYSLPDFEDWKKTSG---D 550

Query: 626  SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLL 685
             WS+KY KGLGTSTS++ K YF+N+    K F W DD   E I+ +F+K + + RK WLL
Sbjct: 551  KWSVKYLKGLGTSTSEDAKRYFKNLKGLTKVFGWTDDS-SELIDRSFNKSRADERKTWLL 609

Query: 686  QFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNF 745
             FEPGN LDQ    I   DF++KELILFS  D++RS+PS+VDGLKP QRKILF +FKRN 
Sbjct: 610  NFEPGNQLDQTLTKIPVDDFIDKELILFSRYDVERSVPSVVDGLKPSQRKILFSAFKRNL 669

Query: 746  IKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGK 805
              E KVAQF+GYVSEH+ YHHGE SL   I+ MAQD+VGSNNINLL P GQFG+R  GGK
Sbjct: 670  TSEIKVAQFAGYVSEHAGYHHGEASLQGAIVAMAQDYVGSNNINLLMPKGQFGSRLHGGK 729

Query: 806  DAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGT 865
            D+ASARYIFT+LSP TR +F K D++LL+YL +DG +IEP +Y+P IP +LVNG+ GIGT
Sbjct: 730  DSASARYIFTQLSPNTRDIFHKADERLLNYLEDDGDKIEPEYYVPTIPMILVNGANGIGT 789

Query: 866  GWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIE 925
            G+S+ IP+YNP+DIV NV+RL+NG+ M  M PWYRGF G I++T+    GV +T +G+  
Sbjct: 790  GFSTNIPSYNPKDIVDNVKRLINGKAMTEMTPWYRGFKGDIKETS---PGV-FTCSGVY- 844

Query: 926  EVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMM 985
            ++   T+ + ELP+  WT +Y+E LE +I++    +  FR+  D+  V FE+        
Sbjct: 845  DIKGKTVTVSELPVGTWTSEYKEQLEILIEKK--IVADFREKHDEKNVLFEI-----DFT 897

Query: 986  RTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQL 1045
             T    +L   KL +TI T+NMH FD    I+KY +P  I+ ++F +R EFY KRK+  L
Sbjct: 898  GTPDPKIL---KLESTIRTTNMHAFDKNSGIRKYGSPLDIITDWFEVRKEFYVKRKEDML 954

Query: 1046 ENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAG 1105
            ++L+  +L  +NK RFI  V +G +V+  R   D++ +L++  F                
Sbjct: 955  KDLKARVLVSQNKSRFINSVNDGSLVITRRAEDDVVKDLKKMKF---------------- 998

Query: 1106 ATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKAT 1165
              D+ + S              YDYLL M I +LT E+ + L A+   L EE+  L+   
Sbjct: 999  --DKVDGS--------------YDYLLGMKISSLTKERAEKLRAEAAALEEELVVLQNTG 1042

Query: 1166 PESLWVKDLDAL 1177
             E +W  DLDA+
Sbjct: 1043 TEEMWNSDLDAI 1054


>gi|448928346|gb|AGE51917.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CVM-1]
          Length = 1058

 Score =  924 bits (2389), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/1151 (46%), Positives = 715/1151 (62%), Gaps = 103/1151 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ EH+L RPDTY+GS+EK  +  ++Y+    T   + + Y P   KIFDEILVN+
Sbjct: 5    YIKLSQREHVLARPDTYVGSVEKELRNDFVYDGAKIT--KKDVLYSPAFLKIFDEILVNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV I +  D IS+ N G  +P+E   +EG+Y+PE+IFGHLL+  N+D
Sbjct: 63   ADCFNRGGAMTTLKVTISK--DSISIFNDGCSIPLE-KNDEGIYIPEMIFGHLLSGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS  F +E  DG    KY Q +++NM   S+  I+K  + 
Sbjct: 120  DTEERTGAGRNGYGSKLTNIFSKIFSVEIYDGSH--KYVQSWSDNMISVSKAKITKSSKA 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  SF PDLA+F MT ++DD  +++ +RV D+A  LG SV+V L+G R+ VK+  +Y
Sbjct: 178  PSIT-TSFVPDLARFGMTDIDDDTRSILVRRVYDMAAVLG-SVRVFLDGKRLEVKTPLDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
              +Y      F     + W I V     +F  VSFVN  A  +GGTHVD V N +A  V+
Sbjct: 236  FKLYTDEKVVFESA--DGWSIGVA-PANEFACVSFVNASAA-RGGTHVDAVVNSIAKAVV 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
               +KK     VK   VKN L+VFVNA I NP F SQTK+ LT R   F      S  FL
Sbjct: 292  EAASKKK--TIVKPTMVKNKLFVFVNAKIVNPTFSSQTKDILTSRNIKFSP----SAAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK T    +++ +++  N ++S    + LKK DG K   + GI KL DA  AG +NS  C
Sbjct: 346  KKATGL--VLDAVIAETNVRESLVDARLLKKTDGVKKTRLTGIKKLTDAAWAGTKNSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + +  N+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSIAANAEIAAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LQVGKTYKDASSLRYGSVMLMTDA----------------------------DVDGSHIS 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
             L++NF H+ +PSLL +P FL +F TPIV A+ +   +  FYS+PDYE+WK++   + + 
Sbjct: 496  ALVMNFFHAQFPSLLAVPGFLKKFSTPIVVAS-RGKDIKEFYSLPDYESWKQNTA-DCAK 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            WSIKY+KGLGTSTS++ K+YF+N+    K F W +D  GE I+ +F+K + + RK WLL 
Sbjct: 554  WSIKYFKGLGTSTSEDAKKYFKNLKSLVKIFGWTEDS-GELIDRSFNKSRPDERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQ +  I   DF++KELILFS  D++RSIPS+VDGLKP QRKILF +FKRN  
Sbjct: 613  FQPGNQLDQSKTNIPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAFKRNLT 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQFSGYV+EHS YHHGEQSL   I+GMAQD+VGSNN+NLL PNGQFG+R  GGKD
Sbjct: 673  NEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRLLGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            +ASARYIFT+LSP TR +F + DD LL YL +DG  IEP WY+P IP +LVNG+ GIGTG
Sbjct: 733  SASARYIFTKLSPATRQVFNQSDDVLLKYLEDDGSSIEPEWYVPAIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNP+DI+ NV+RL++G+ M PM PWY+GF GTI +  +     T+T  G + +
Sbjct: 793  FSTDIPSYNPKDIIDNVKRLISGKEMVPMTPWYKGFTGTIVQNDNG----TFTCKG-VAK 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            VN   + + ELPI  WT DY++FLE ++++    I  FR+   +  V FE+  S E  + 
Sbjct: 848  VNGKVVVVSELPIGTWTSDYKDFLEGLVEKK--VIVDFREKHTEKNVMFEIDYSGEPDIS 905

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                      KL   I T+NMH FD +G IKKY  P  I+ ++F +R EFY KRK   L+
Sbjct: 906  I--------LKLEKVIRTTNMHAFDPQGKIKKYADPLDIIRDWFEVRREFYTKRKNYLLK 957

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L  +    ENK RFI  +VN E+V++ +  + +L ELR   F                 
Sbjct: 958  DLSHKAAIAENKHRFITLIVNDELVLSKKTESVILSELRTLKFY---------------- 1001

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
              ++E S              Y YLL M+I +LTLE+ + L  + +KL +E+  L   + 
Sbjct: 1002 --KSEGS--------------YKYLLDMSISSLTLERAEKLRIEAEKLKKELSILENTSR 1045

Query: 1167 ESLWVKDLDAL 1177
              +W  DL+ +
Sbjct: 1046 TQMWNTDLNNI 1056


>gi|219121754|ref|XP_002181225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407211|gb|EEC47148.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1165

 Score =  923 bits (2385), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/1208 (42%), Positives = 725/1208 (60%), Gaps = 96/1208 (7%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEK-HTQALWIYEE----ESKTMIHRTISYVPGLYK 81
            +E+ Y +K+ LEH+LLRP  Y+GS EK    A W+ +      ++ ++ +T S       
Sbjct: 1    LEDQYSRKTPLEHVLLRPSMYVGSNEKAQPIACWVPDPIPTPPTEELLMKTTS------- 53

Query: 82   IFDEILVNAADNKQRDP-KMDAVKVVIDQEHD----LISVHNSGDGVPVEIHQEEGVYVP 136
            +FDEILVNAADN QR P     + V+ID   D     I V N G G+PV++HQ+EG+YVP
Sbjct: 54   VFDEILVNAADNLQRHPDSCTRIDVIIDPGSDNRDPFIRVRNDGKGIPVQVHQKEGMYVP 113

Query: 137  ELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
            E++FGHLLT SN+DDN K+ TGGR+G+GAKLTNIFS  F +ET D ++  KY+Q +++NM
Sbjct: 114  EMLFGHLLTGSNFDDNEKRLTGGRHGFGAKLTNIFSKSFTVETLDSRKRLKYRQTWSSNM 173

Query: 197  GKKSEPNISKC-KEGDNWTKVSFKPDLAKF----NMTHLEDDVVALMKKRVVDLAGCLGK 251
               S P I +   +  ++T VSF PD+A+     +   +  +  ALM +RV+D+AGC   
Sbjct: 174  TNASSPEIVEVPADATDYTCVSFVPDVARLTNDASALSISKEDYALMCRRVLDVAGCSAG 233

Query: 252  SVKVELNGHRVPVKSFAEYVDMYPK--SVTRFHERVNERWEICVTLSE-GQFQQVSFVNG 308
             ++V LNG  V + SF +Y  +Y K  S+    + +N RW + V LSE G F+ VSFVNG
Sbjct: 234  RLRVTLNGVDVTMGSFPDYARLYRKQDSLPVCFDAINSRWTVGVGLSETGSFEMVSFVNG 293

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHN--VKNHLWVFVNALIDNPAFDS 366
            +AT +GGTHV+ +  QV   +   + K +      A    ++ HL+V V ALI+NP FDS
Sbjct: 294  MATSRGGTHVNSILQQVIKKIQEKIEKTDPELVQMASQGVIRRHLFVSVAALIENPTFDS 353

Query: 367  QTKETLTLRQSSFGSKCELSEEFLKKVT-----AKSGIVETLLSWANFKQSKDLKKNDGT 421
            Q KE LT   + FGS   LSE F+K V         GIVE +   A  +Q   L K  G 
Sbjct: 354  QMKECLTSSPADFGSSFSLSESFIKSVLQSEEEGGPGIVEEIRRAAQSRQQATLLKVIGG 413

Query: 422  KT--EDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRG 479
            KT    +  I KLEDA+ AG ++  +CTLILTEGDSAKALA+AGL V+GR R+GVFPLRG
Sbjct: 414  KTSKRQLLSIPKLEDAHHAGTKSGSECTLILTEGDSAKALAVAGLEVIGRARYGVFPLRG 473

Query: 480  KLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNV---KSLRYGHLMIMTDQVLLAPL 536
            KLLNVREA+ +Q+  N+E+  +  I+GL     Y  +   + LRYG +M+MTDQ      
Sbjct: 474  KLLNVREAAVSQMAKNAEVTALCAIIGLDFDKTYETIEERRKLRYGKVMLMTDQ------ 527

Query: 537  SFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK------------IP 584
                                  D DGSHIKGL++NF   FWP+LLK             P
Sbjct: 528  ----------------------DTDGSHIKGLVMNFFRYFWPNLLKPPVDLQVNDEDETP 565

Query: 585  SFLVEFITPIVKATNKNGKV--LSFYSMPDYEAWKESLGG-NASSWSIKYYKGLGTSTSK 641
             FL  F+TP++KA+ K+ K   LSFYSM +Y+ W+ S+   +   W++KYYKGLGTST  
Sbjct: 566  PFLSSFVTPLLKASKKSSKTGTLSFYSMAEYKKWRGSIEAEDFKKWTVKYYKGLGTSTPA 625

Query: 642  EGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQF--EPGNHLDQKE-- 697
            E +EYF     H + F+W  D DGE +++ F  ++   R+ W+L    E  N L+     
Sbjct: 626  EAREYFSAFNDHFRPFLWNSDIDGELLDMVFDGERAADRRAWILDVYDETSNLLNDPSAG 685

Query: 698  KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
              + Y DF+NKE+I FS AD  RSIPS +DGLKP QRK+L+  FKR    E KVAQ +GY
Sbjct: 686  NNVSYEDFINKEMIHFSNADNIRSIPSAIDGLKPSQRKVLYACFKRKLKSEIKVAQLTGY 745

Query: 758  VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
             +EH+AYHHGE SL STI+GMAQDFVGSNNINLL P+GQFGTR  GG DAAS RYI+T L
Sbjct: 746  CAEHTAYHHGEASLQSTIIGMAQDFVGSNNINLLVPSGQFGTRIMGGADAASPRYIYTYL 805

Query: 818  SPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPR 877
            +PI R LFP+ DD LL YL +DGQQIEP +Y PIIP ++VNG +GIGTGWS++IP ++  
Sbjct: 806  APIARSLFPEADDTLLSYLEDDGQQIEPEFYCPIIPLLVVNGCQGIGTGWSTFIPPHSAN 865

Query: 878  DIVANVRRLLNG-EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKE 936
            D++  +   L+G E +  +HP+ RGF G IE   +    V++  +  I   ++ T+ I E
Sbjct: 866  DVLEYILAKLDGAERLPKIHPFARGFQGRIEPDPNGNGYVSFGRSSCI---SDRTILIDE 922

Query: 937  LPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKF 996
            LP+R WT  Y+  L  + D+ +  +  F +  + + V F V L    + R  Q GL K F
Sbjct: 923  LPLRCWTNKYKGILLKMRDRGE--VTSFVENHNTSKVSFLVTLKSAQLARMTQAGLEKSF 980

Query: 997  KLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLE 1056
            KL T + T+NMH F+  G I K+DT E I+E FF +R++ Y+ R  +    L  E   L 
Sbjct: 981  KLKTNLQTTNMHAFNKDGQICKFDTAESIVEAFFPVRMQLYQDRIALLQSLLNYEASILR 1040

Query: 1057 NKVRFILGVVNGEIVVNNRKRT--DLLLELRQKGFT-PFPKNSKSIEAVVAGATDETEES 1113
            NK  FI  V +G+I + + +R+  +   +L++ GF      N+   E V+       + +
Sbjct: 1041 NKAGFIKAVTSGDIDLTSGRRSKQETSKKLKEHGFLDSVELNAIKNENVL---WKRRQFA 1097

Query: 1114 EENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKD 1173
             E  E  + ++ +++DYLL+M + +LT EK++ L       ++E+++++  TP  LW +D
Sbjct: 1098 SEKGEGGSNLEPMNFDYLLNMPLSSLTSEKIRELGEHAATKDKELEEMKSTTPVDLWRRD 1157

Query: 1174 LDALDMQL 1181
            L  L + L
Sbjct: 1158 LQKLALLL 1165


>gi|53854901|gb|AAU95770.1| topoisomerase II [Paramecium bursaria Chlorella virus Marburg 1]
          Length = 1058

 Score =  921 bits (2381), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 531/1151 (46%), Positives = 714/1151 (62%), Gaps = 103/1151 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ EH+L RPDTY+GS+EK  +  ++Y+    T   + + Y P   KIFDEILVN+
Sbjct: 5    YIKLSQREHVLARPDTYVGSVEKELRNDFVYDGAKIT--KKDVLYSPAFLKIFDEILVNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV I +  D IS+ N G  + +E   +EG+Y+PE+IFGHLL+  N+D
Sbjct: 63   ADCFNRGGAMTTLKVTISK--DSISIFNDGCSISLE-KNDEGIYIPEMIFGHLLSGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS  F +E  DG    KY Q +++NM   S+  I+K  + 
Sbjct: 120  DTEERTGAGRNGYGSKLTNIFSKIFSVEIYDGSH--KYVQSWSDNMISVSKAKITKSSKA 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  SF PDLA+F MT ++DD  +++ +RV D+A  LG SV+V L+G R+ VK+  +Y
Sbjct: 178  PSIT-TSFVPDLARFGMTDIDDDTRSILVRRVYDMAAVLG-SVRVFLDGKRLEVKTPLDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
              +Y      F     + W I V     +F  VSFVN  A  +GGTHVD V N +A  V+
Sbjct: 236  FKLYTDEKVVFESA--DGWSIGVA-PANEFACVSFVNASAA-RGGTHVDAVVNSIAKAVV 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
               +KK     VK   VKN L+VFVNA I NP F SQTK+ LT R   F      S  FL
Sbjct: 292  EAASKKK--TIVKPTMVKNKLFVFVNAKIVNPTFSSQTKDILTSRNIKFSP----SAAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK T    +++ +++  N ++S    + LKK DG K   + GI KL DA  AG +NS  C
Sbjct: 346  KKATGL--VLDAVIAETNVRESLVDARLLKKTDGVKKTRLTGIKKLTDAAWAGTKNSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + +  N+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSIAANAEIAAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LQVGKTYKDASSLRYGSVMLMTDA----------------------------DVDGSHIS 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
             L++NF H+ +PSLL +P FL +F TPIV A+ +   +  FYS+PDYE+WK++   + + 
Sbjct: 496  ALVMNFFHAQFPSLLAVPGFLKKFSTPIVVAS-RGKDIKEFYSLPDYESWKQNTA-DCAK 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            WSIKY+KGLGTSTS++ K+YF+N+    K F W +D  GE I+ +F+K + + RK WLL 
Sbjct: 554  WSIKYFKGLGTSTSEDAKKYFKNLKSLVKIFGWTEDS-GELIDRSFNKSRPDERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQ +  I   DF++KELILFS  D++RSIPS+VDGLKP QRKILF +FKRN  
Sbjct: 613  FQPGNQLDQSKTNIPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAFKRNLT 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQFSGYV+EHS YHHGEQSL   I+GMAQD+VGSNN+NLL PNGQFG+R  GGKD
Sbjct: 673  NEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRLLGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            +ASARYIFT+LSP TR +F + DD LL YL +DG  IEP WY+P IP +LVNG+ GIGTG
Sbjct: 733  SASARYIFTKLSPATRQVFNQSDDVLLKYLEDDGSSIEPEWYVPAIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNP+DI+ NV+RL++G+ M PM PWY+GF GTI +  +     T+T  G + +
Sbjct: 793  FSTDIPSYNPKDIIDNVKRLISGKEMVPMTPWYKGFTGTIVQNDNG----TFTCKG-VAK 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            VN   + + ELPI  WT DY++FLE ++++    I  FR+   +  V FE+  S E  + 
Sbjct: 848  VNGKVVVVSELPIGTWTSDYKDFLEGLVEKK--VIVDFREKHTEKNVMFEIDYSGEPDIS 905

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                      KL   I T+NMH FD +G IKKY  P  I+ ++F +R EFY KRK   L+
Sbjct: 906  I--------LKLEKVIRTTNMHAFDPQGKIKKYADPLDIIRDWFEVRREFYTKRKNYLLK 957

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L  +    ENK RFI  +VN E+V++ +  + +L ELR   F                 
Sbjct: 958  DLSHKAAIAENKHRFITLIVNDELVLSKKTESVILSELRTLKFY---------------- 1001

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
              ++E S              Y YLL M+I +LTLE+ + L  + +KL +E+  L   + 
Sbjct: 1002 --KSEGS--------------YKYLLDMSISSLTLERAEKLRIEAEKLKKELSILENTSR 1045

Query: 1167 ESLWVKDLDAL 1177
              +W  DL+ +
Sbjct: 1046 TQMWNTDLNNI 1056


>gi|448934521|gb|AGE58074.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus NW665.2]
          Length = 1058

 Score =  920 bits (2379), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 528/1148 (45%), Positives = 716/1148 (62%), Gaps = 103/1148 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ +HIL+RPDTY+GS+EK  +  +I++    T   + + Y P   KIFDEILVN+
Sbjct: 5    YIKLSQRDHILIRPDTYVGSVEKELRNEYIFDGSKIT--KKDVLYSPAFMKIFDEILVNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV I   ++ ISV+N G  +P+E   +EG+Y+PE+IFGHLL+  N+D
Sbjct: 63   ADCFNRGGAMTTLKVTI--SNNSISVYNDGCSIPLE-KNDEGIYIPEMIFGHLLSGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS  F +E  DG  L+KY Q +T+NM   +   I+K  + 
Sbjct: 120  DTKERTGAGRNGYGSKLTNIFSKVFSVEIYDG--LQKYVQSWTDNMNSSTNAKITKSSKA 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  SF PDLA+F MT +++D  +++ +RV D+A  LG SV+V L+G R+ VK+  +Y
Sbjct: 178  QSIT-TSFVPDLARFGMTDIDNDTRSILVRRVYDMAAVLG-SVRVFLDGKRLEVKTPLDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
              +Y      F     + W I V     +F  VSFVN  A  +GGTHVD V N +A  V+
Sbjct: 236  FKLYTNEKVVFESA--DGWSIGVA-PANEFACVSFVNASAA-RGGTHVDTVVNSIAKAVV 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
               +KK     VK   VKN L+VFVNA + NP F SQTK+ LT R   F      S  FL
Sbjct: 292  EAASKKK--TIVKPAMVKNKLFVFVNAKVVNPTFSSQTKDILTSRNIKFSP----SAAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK T    +++ +++  N ++S    + LKK DG K   + GI KL DA  AG +NS  C
Sbjct: 346  KKATGL--VLDAVIAETNVRESLVDARLLKKTDGVKKTRLTGIKKLTDAAWAGTKNSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + +  N+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSIAANAEIAAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LQVGKTYKDASSLRYGSVMLMTDA----------------------------DVDGSHIS 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
             L++NF H+ +PSLL +P FL +F TPIV A+ +   +  FYS+PDYE+WK++   + + 
Sbjct: 496  ALVMNFFHAQFPSLLAVPGFLKKFSTPIVVAS-RGKDINEFYSLPDYESWKKNTA-DCAK 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            WSIKY+KGLGTSTS++ K+YF+N+    K F W +D  GE I+ +F+K + + RK WLL 
Sbjct: 554  WSIKYFKGLGTSTSEDAKKYFKNLKSLVKIFGWTEDS-GELIDRSFNKSRPDERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQ +  I   DF++KELILFS  D++RSIPS+VDGLKP QRKILF +FKRN  
Sbjct: 613  FQPGNQLDQSKTNIPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAFKRNLT 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQFSGYV+EHS YHHGEQSL   I+GMAQD+VGSNN+NLL PNGQFG+R  GGKD
Sbjct: 673  NEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRLLGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            +ASARYIFT+LSP TR +F + DD LL YL +DG  IEP WY+P IP +LVNG+ GIGTG
Sbjct: 733  SASARYIFTKLSPATRQVFNQADDVLLKYLEDDGSSIEPEWYVPAIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNP+DI+ NV+RL++G+ M PM PWYRGF GTI++  +     T+T  G + +
Sbjct: 793  FSTDIPSYNPKDIIDNVKRLISGKEMVPMSPWYRGFTGTIDQNDNG----TFTCKG-VAK 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            V+  ++ + ELP+  WT DY++FLE ++++    I  FR+   +  V FE+  S E    
Sbjct: 848  VSGKSVVVSELPVGTWTSDYKDFLEGLVEKK--VIVDFREKHTEKNVLFEIDYSGEPD-- 903

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                  L   KL   I T+NMH FD +G IKKY     I+ ++F +R EFY KRK   L+
Sbjct: 904  ------LSILKLEKVIRTTNMHAFDPQGKIKKYACSLDIIRDWFEVRREFYTKRKNYLLK 957

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L  +    ENK RFI  +VN E+V++ +  + +L ELR   F                 
Sbjct: 958  DLSHKAAIAENKHRFITLIVNDELVLSKKTESVILSELRTLKFY---------------- 1001

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
              ++E S              Y YLL M+I +L+ E+ + L  + +KL +E+  L   + 
Sbjct: 1002 --KSEGS--------------YKYLLDMSISSLSTERAEKLRLEAEKLKKELTILENTSR 1045

Query: 1167 ESLWVKDL 1174
              +W  DL
Sbjct: 1046 TQMWSDDL 1053


>gi|224007305|ref|XP_002292612.1| DNA topoisomerase [Thalassiosira pseudonana CCMP1335]
 gi|220971474|gb|EED89808.1| DNA topoisomerase [Thalassiosira pseudonana CCMP1335]
          Length = 1179

 Score =  920 bits (2378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 523/1215 (43%), Positives = 730/1215 (60%), Gaps = 95/1215 (7%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            +TIE+ Y +K+ LEHILLRP  YIG  E              TM  + +SYVP L KIFD
Sbjct: 1    ETIEDTYSRKTPLEHILLRPSMYIGPTEHADPKSCSSTNSPWTMQRQELSYVPALLKIFD 60

Query: 85   EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
            EILVNA+DN+ R P   +           IS+ N+G  +P++IH++E +Y+PEL+FGHLL
Sbjct: 61   EILVNASDNRLRHP--GSCNHFPSSSDPYISITNNGKSIPIQIHRKENMYIPELLFGHLL 118

Query: 145  TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGK----RLKKYKQVFTNNMGKKS 200
            T SN++D+ K+ TGGR+GYGAKLTN+FS +F++E  DG     ++K YKQV+ +NM    
Sbjct: 119  TGSNFNDDQKRLTGGRHGYGAKLTNVFSKQFVVEIGDGHSSKGKIKTYKQVWEDNMSVCH 178

Query: 201  EPNISKCKEGD-------NWTKVSFKPDLAKFN----MTHLEDDVVALMKKRVVDLAGCL 249
            E  +    + D       ++T++SF PDLA+         L ++   LMK+RVVD+AGC 
Sbjct: 179  EAEVVSRDKKDADGKGNLDYTRISFIPDLARLTGDRKTEMLPEEEYQLMKRRVVDIAGCS 238

Query: 250  GKSVKVELNGHRVPVKSFAEYVDMY--PKSVTR-----FHERVNERWEICVTLSEGQ-FQ 301
            G  + V LNG  + V  F +Y ++Y  P+S         + ++N RWE+ V LSE +  +
Sbjct: 239  GGKLTVTLNGEEISVSGFEDYANLYRQPESSATPLPPMVYHKLNSRWEVAVGLSETKSLE 298

Query: 302  QVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK----------NKNANVKAHNVKNHL 351
             +SFVNG+ T +GGTHVD +A Q++ ++   +N K           +  +V    V+ HL
Sbjct: 299  SISFVNGMNTSRGGTHVDALARQISQYIADHINNKMARQLDNLQSGQPISVSVRMVRRHL 358

Query: 352  WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQ 411
            ++ VN LI+NP+FDSQ KE LT    +FGS  ELS  FL+K+    GIVE +L  A   Q
Sbjct: 359  FLCVNCLIENPSFDSQMKECLTSNPDNFGSHFELSNSFLRKLVG-PGIVEEVLRMAMGAQ 417

Query: 412  SKDLKKNDGTKTE-DVRGISKLEDANLAGGRN---SEQCTLILTEGDSAKALAMAGLSVV 467
              ++ +    +T+  V  I KLEDANLAG  +      CTLILTEGDSAKALA+AGL VV
Sbjct: 418  QVNMARLLKEQTKRQVLSIPKLEDANLAGSTDIGTENPCTLILTEGDSAKALAVAGLEVV 477

Query: 468  GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKS---LRYGHL 524
            GRD +GVFPLRGK +NVR  +  Q+  N+E+  +  ILGL+    Y+  K    LRYGH+
Sbjct: 478  GRDHYGVFPLRGKFMNVRNVTVKQLATNAELKAMCAILGLQFEKSYDTAKERQELRYGHV 537

Query: 525  MIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIP 584
            M+MTDQ                            D DGSHIKGL++N    FWP+LLK P
Sbjct: 538  MLMTDQ----------------------------DADGSHIKGLIMNMFRFFWPALLKPP 569

Query: 585  S--FLVEFITPIVKATNKNGKV--LSFYSMPDYEAWKESLGGN--ASSWSIKYYKGLGTS 638
            S  F+  FITP++KAT K  K   +SF+S+ +Y +W+ESL      S W++KYYKGLGTS
Sbjct: 570  SRPFMSMFITPLLKATKKGKKKDSISFFSVAEYNSWRESLEDEDEISKWTVKYYKGLGTS 629

Query: 639  TSKEGKEYFQNITLHKKDFVWEDDQ-DGEAIELAFSKKKIEARKKWLL-QFEPGNHLDQK 696
            T  E K+YF +   H + F W+ ++ DGE I++AF K +   RK W+L +++  + +   
Sbjct: 630  TPTEAKDYFLSFVRHYRPFKWQSEKNDGERIDMAFEKDRANDRKDWILTEYDEKSAVTVD 689

Query: 697  EK---YIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQ 753
            E+    I Y DFV+ ELI FS A+  RS+P++VDGLKP QRK+L+  FKRN   E KVAQ
Sbjct: 690  ERDGNSITYGDFVDNELIHFSNANNIRSLPNVVDGLKPSQRKVLYACFKRNLKDEIKVAQ 749

Query: 754  FSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYI 813
             +GY +EH+AYHHGE SL STI+GMAQDF GSNNINLL P+GQFGTR  GG DAAS RYI
Sbjct: 750  LAGYCAEHTAYHHGEASLHSTIIGMAQDFCGSNNINLLTPSGQFGTRLMGGNDAASPRYI 809

Query: 814  FTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPN 873
            FT LSP++R LFP DDD LL+Y  EDGQ IEP ++ PIIP +LVNG +GIGTGWS++IP 
Sbjct: 810  FTHLSPLSRLLFPVDDDMLLNYKEEDGQMIEPEYFCPIIPLLLVNGCQGIGTGWSTFIPQ 869

Query: 874  YNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLR 933
            +NP D++  +R  L+      + PW +GF G I  T   + G  Y   GII     +++ 
Sbjct: 870  HNPLDVLNYIRAKLDETKKPAIRPWVKGFEGGI--TVDSKRG-DYVTEGIITPQKNSSVV 926

Query: 934  IKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLL 993
            I ELP+  WT DY+  L +++ + +  I+ F Q    TTV F V ++   + R  +  +L
Sbjct: 927  ISELPVGVWTNDYKATLVAMLKKAE--IKSFSQNHTTTTVSFNVKVNAAKLNRLLKGDML 984

Query: 994  KKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELL 1053
            K FKL   +ST NMH F +   I +Y++PE+I + FF +RL+ Y  RK V   N+E    
Sbjct: 985  KTFKLRKALSTRNMHAFTTDMKIARYNSPEEIADAFFPVRLDLYADRKSVLESNMEYSAS 1044

Query: 1054 KLENKVRFILGVVNGEI-VVNNRKR----TDLL--LELRQKGFTPFPKNSKSIEAVVAGA 1106
             + NK RFI  V   +I +++ RK     T LL  +E  ++      K++ +I      +
Sbjct: 1045 LMRNKARFIEAVSANKIDLLHGRKSKEATTALLEEMEFSKQSELDAIKSNNNIAQRRESS 1104

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
                +E   + E   G    +YDYLL++ + +LTLEK+  L  D  K + +++ ++  TP
Sbjct: 1105 NVVMDEFMSDEESAKGAAK-EYDYLLNLPLSSLTLEKIDALNDDAAKTDTKLEQIKNTTP 1163

Query: 1167 ESLWVKDLDALDMQL 1181
              LW +DL+ L+  L
Sbjct: 1164 ADLWREDLNRLEPHL 1178


>gi|448926329|gb|AGE49906.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus Can18-4]
          Length = 1058

 Score =  920 bits (2378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/1148 (46%), Positives = 714/1148 (62%), Gaps = 103/1148 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ EH+L RPDTY+GS+EK  +  ++Y+    T   + + Y P   KIFDEILVN+
Sbjct: 5    YIKLSQREHVLARPDTYVGSVEKELRNDFVYDGAKIT--KKDVLYSPAFLKIFDEILVNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV I +  D ISV+N G  +P+E   +EGVY+PE+IFGHLL+  N+D
Sbjct: 63   ADCFNRGGAMSTLKVAISK--DSISVYNDGCSIPLE-KNDEGVYIPEMIFGHLLSGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS  F++E  DG    KY Q +++NM   S+  I+K  + 
Sbjct: 120  DTEERTGAGRNGYGSKLTNIFSKTFVVEIYDGSH--KYVQSWSDNMISVSKAKITKSSKV 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  SF PDLA+F M  ++DD  +++ +RV D+A  LG SV+V L+G R+ VK+  +Y
Sbjct: 178  PSIT-TSFVPDLARFGMADIDDDTRSILVRRVYDMAAVLG-SVRVFLDGKRLDVKTPLDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
              +Y      F     + W I V     +F  VSFVN  A  +GGTHVD V N +A  V+
Sbjct: 236  FKLYTDEKVVFESA--DGWSIGVA-PANEFACVSFVNASAA-RGGTHVDTVVNSIAKAVV 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
               +KK     VK   VKN L+VFVNA + NP F SQTK+ LT R   F      S  FL
Sbjct: 292  EAASKKK--TIVKPAMVKNKLFVFVNAKVVNPTFSSQTKDILTSRNIKFSP----SAAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK T    +++ +++  N ++S    + LKK DG K   + GI KL DA  AG +NS  C
Sbjct: 346  KKATGL--VLDAVIAETNVRESLVDARLLKKTDGVKKTRLTGIKKLTDAAWAGTKNSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + +  N+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSIAANAEIAAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LQVGKTYKDASSLRYGSVMLMTDA----------------------------DVDGSHIS 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
             L++NF H+ +PSLL +P FL +F TPIV A+ +   +  FYS+PDYE+WK++   + + 
Sbjct: 496  ALVMNFFHAQFPSLLAVPGFLKKFSTPIVVAS-RGKDIKEFYSLPDYESWKQNTA-DCAK 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            WSIKY+KGLGTSTS++ K+YF+N+    K F W +D  GE I+ +F+K + + RK WLL 
Sbjct: 554  WSIKYFKGLGTSTSEDAKKYFKNLKSLVKIFGWTEDS-GELIDRSFNKSRPDERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQ +  I   DF++KELILFS  D++RSIPS+VDGLKP QRKILF +FKRN +
Sbjct: 613  FQPGNQLDQSKTNIPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAFKRNLV 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
            +E KVAQFSGYVSE S YHHGEQSL   I+GMAQD+VGSNN+NLL PNGQFG+R  GGKD
Sbjct: 673  QEIKVAQFSGYVSEISGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRILGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
             ASARYIFT+LSP+TR +F + DD LL YL +DG  IEP WY+P IP +LVNG+ GIGTG
Sbjct: 733  CASARYIFTKLSPVTRQVFNQADDVLLKYLEDDGSSIEPEWYVPAIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNP+DI+ NV+RL++G+ M PM PWY+GF G I +  +     T+T  G + +
Sbjct: 793  FSTDIPSYNPKDIIDNVKRLISGKDMVPMTPWYKGFTGIIVQNDNG----TFTCKG-VAK 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            VN  T+ + ELPI  WT DY++FLE ++++    I  FR+   +  V FE+  S E  + 
Sbjct: 848  VNGKTVVVSELPIGTWTSDYKDFLEGLVEKK--VIVDFREKHTEKNVLFEIDYSGEPDIS 905

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                      KL   I T+NMH FD +G IKKY  P  I+ ++F +R EFY KRK   ++
Sbjct: 906  I--------LKLEKVIRTTNMHAFDPQGKIKKYADPLDIIRDWFEVRREFYTKRKAYLIK 957

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L  +    ENK RFI  +VN E+V++ +  + +L ELR   F                 
Sbjct: 958  DLSHKAAIAENKHRFITLIVNDELVLSKKTESVILSELRTLKFY---------------- 1001

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
              ++E S              Y YLL M+I +L+ E+ + L  + +KL +E+  L   + 
Sbjct: 1002 --KSEGS--------------YKYLLDMSISSLSTERAEKLRIEAEKLKKELSILENTSR 1045

Query: 1167 ESLWVKDL 1174
              +W  DL
Sbjct: 1046 IQMWSDDL 1053


>gi|448926996|gb|AGE50571.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CVA-1]
 gi|448928680|gb|AGE52250.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CVR-1]
          Length = 1058

 Score =  920 bits (2377), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/1148 (46%), Positives = 711/1148 (61%), Gaps = 103/1148 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ +HIL+RPDTY+GS+EK  +  +I++    T   + + Y P   KIFDEILVN+
Sbjct: 5    YIKLSQRDHILIRPDTYVGSVEKELRNEYIFDGSKIT--KKDVLYSPAFMKIFDEILVNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV I +  D ISV+N G  +P+E   +EG+Y+PE+IFGHLL+  N+D
Sbjct: 63   ADCFNRGGAMTTLKVTISK--DSISVYNDGCSIPLE-KNDEGIYIPEMIFGHLLSGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS  F +E  DG    KY Q +T+NM   +   I+K  + 
Sbjct: 120  DTKERTGAGRNGYGSKLTNIFSKVFSVEIYDGSH--KYVQSWTDNMNSSTNAKITKSSKT 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  SF PDLA+F M  ++DD  +++ +RV D+A  LG SV+V L+  R+ VK+  +Y
Sbjct: 178  QSIT-TSFVPDLARFGMVDIDDDTRSILVRRVYDMAAVLG-SVRVFLDNKRLDVKTPLDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
              +Y      F     + W I V     +F  VSFVN  A  +GGTHVD V N +A  V+
Sbjct: 236  FKLYTDEKVVFESA--DGWSIGVA-PANEFACVSFVNASAA-RGGTHVDAVVNSIAKAVV 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
               +KK     VK   VKN L+VFVNA + NP F SQTK+ LT R   F      S  FL
Sbjct: 292  EAASKKK--TIVKPAMVKNKLFVFVNAKVVNPTFSSQTKDILTSRNIKFSP----SAAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK T    +++ +++  N ++S    + LKK DG K   + GI KL DA  AG +NS  C
Sbjct: 346  KKATGL--VLDAVIAETNVRESLVDARLLKKTDGVKKTRLTGIKKLTDAAWAGTKNSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + +  N+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSIAANAEIAAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LQVGKTYKDASSLRYGSVMLMTDA----------------------------DVDGSHIS 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
             L++NF H+ +PSLL +P FL +F TPIV A+ +   +  FYS+PDYE+WK++   + + 
Sbjct: 496  ALVMNFFHAQFPSLLAVPGFLKKFSTPIVVAS-RGKDIKEFYSLPDYESWKQNTA-DCAK 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            WSIKY+KGLGTSTS++ K+YF+N+    K F W +D  GE I+ +F+K + + RK WLL 
Sbjct: 554  WSIKYFKGLGTSTSEDAKKYFKNLKSLVKIFGWTEDS-GELIDRSFNKSRPDERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQ +  I   DF++KELILFS  D++RSIPS+VDGLKP QRKILF +FKRN  
Sbjct: 613  FQPGNQLDQSKTNIPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAFKRNLT 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQFSGYV+EHS YHHGEQSL   I+GMAQD+VGSNN+NLL PNGQFG+R  GGKD
Sbjct: 673  NEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRLLGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            +ASARYIFT+LSP TR +F + DD LL YL +DG  IEP WY+P IP +LVNG+ GIGTG
Sbjct: 733  SASARYIFTKLSPATRQVFNQSDDVLLKYLEDDGSSIEPEWYVPAIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNP+DI+ NV+RL++G+ M PM PWY+GF GTI +  +     T+T  G + +
Sbjct: 793  FSTDIPSYNPKDIIDNVKRLISGKEMVPMTPWYKGFTGTIVQNDNG----TFTCKG-VAK 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            VN   + + ELPI  WT DY++FLE ++++    I  FR+   +  V FE+  S E  + 
Sbjct: 848  VNGKVVVVSELPIGTWTSDYKDFLEGLVEKK--VIVDFREKHTEKNVMFEIDYSGEPDIS 905

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                      KL   I T+NMH FD +G IKKY     I+ ++F +R EFY KRK   L+
Sbjct: 906  I--------LKLEKAIRTTNMHAFDPQGKIKKYACSLDIIRDWFEVRREFYTKRKNYLLK 957

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L  +    ENK RFI  +VN E+V++ +  + +L ELR   F                 
Sbjct: 958  DLSHKAAIAENKHRFITLIVNDELVLSKKTESVILSELRTLKFY---------------- 1001

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
              ++E S              Y YLL M+I +LTLE+ + L  + +KL +E+  L   + 
Sbjct: 1002 --KSEGS--------------YKYLLDMSISSLTLERAEKLRIEAEKLKKELSILENTSR 1045

Query: 1167 ESLWVKDL 1174
              +W  DL
Sbjct: 1046 TQMWNDDL 1053


>gi|448925309|gb|AGE48889.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus AP110A]
          Length = 1058

 Score =  919 bits (2374), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 528/1148 (45%), Positives = 712/1148 (62%), Gaps = 103/1148 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ +HIL+RPDTY+GS+EK  +  +I++    T   + + Y P   KIFDEILVN+
Sbjct: 5    YIKLSQRDHILIRPDTYVGSVEKELRNEYIFDGSKIT--KKDVMYSPAFMKIFDEILVNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV I +  D ISV+N G  +P+E   +EG+Y+PE+IFGHLL+  N+D
Sbjct: 63   ADCFNRGGAMTTLKVTISK--DSISVYNDGCSIPLE-KNDEGIYIPEMIFGHLLSGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS  F +E  DG  L+KY Q +T+NM   +   I+K  + 
Sbjct: 120  DTKERTGAGRNGYGSKLTNIFSKVFSVEIYDG--LQKYVQSWTDNMNSSTNAKITKSSKA 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  SF PDLA+F M  ++DD  +++ +RV D+A  LG SV+V L+G R+ VK+  +Y
Sbjct: 178  PSIT-TSFVPDLARFGMADIDDDTRSILVRRVYDMAAVLG-SVRVFLDGKRLDVKTPLDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
              +Y      F     + W I V     +F  VSFVN  A  +GGTHVD V N +A  V+
Sbjct: 236  FKLYTDEKVVFESA--DGWSIGVA-PANEFACVSFVNASAA-RGGTHVDAVVNSIAKAVV 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
               +KK     VK   VKN L+VFVNA + NP F SQTK+ LT R   F      S  FL
Sbjct: 292  EAASKKK--TIVKPAMVKNKLFVFVNAKVVNPTFSSQTKDILTSRNIKFSP----SAAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK T    +++ +++  N ++S    + LKK DG K   + GI KL DA  AG +NS  C
Sbjct: 346  KKATGL--VLDAVIAETNVRESLVDARLLKKTDGVKKTRLTGIKKLTDAAWAGTKNSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + +  N+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSIAANAEIAAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LQVGKTYKDASSLRYGSVMLMTDA----------------------------DVDGSHIS 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
             L++NF H+ +PSLL +P FL +F TPIV A+ +   +  FYS+PDYE+WK++   + + 
Sbjct: 496  ALVMNFFHAQFPSLLAVPGFLKKFSTPIVVAS-RGKDIKEFYSLPDYESWKQNTA-DCAK 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            WSIKY+KGLGTSTS++ K+YF+N+    K F W +D  GE I+ +F+K + + RK WLL 
Sbjct: 554  WSIKYFKGLGTSTSEDAKKYFKNLKSLVKIFGWTEDS-GELIDRSFNKSRPDERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQ +  I   DF++KELILFS  D++RSIPS+VDGLKP QRKILF +FKRN  
Sbjct: 613  FQPGNQLDQSKTNIPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAFKRNLT 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQFSGYV+EHS YHHGEQSL   I+GMAQD+VGSNN+NLL PNGQFG+R  GGKD
Sbjct: 673  NEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRLLGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            +ASARYIFT+LSP TR +F + DD LL YL +DG  IEP WY+P IP +LVNG+ GIGTG
Sbjct: 733  SASARYIFTKLSPATRQVFNQSDDVLLKYLEDDGSSIEPEWYVPAIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNP+DI+ NV+RL++G+ M PM PWY+ F G+I +  +     T+T  G + +
Sbjct: 793  FSTDIPSYNPKDIIDNVKRLISGKEMVPMTPWYKEFTGSIVQNDNG----TFTCKG-VAK 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            VN   + + ELPI  WT DY++FLE ++++    I  FR+   +  V FE+    E    
Sbjct: 848  VNGKVVVVSELPIGTWTSDYKDFLEGLVEKK--VIVDFREKHTEKNVLFEIDFPGEPD-- 903

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                  L   KL   I T+NMH FD +G IKKY  P  I+ ++F +R EFY KRK   L+
Sbjct: 904  ------LSILKLEKAIRTTNMHAFDPQGKIKKYADPLDIIRDWFEVRREFYTKRKNYLLK 957

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L  +    ENK RFI  +VN E+V++ +  + +L ELR   F                 
Sbjct: 958  DLSHKAAIAENKHRFITLIVNDELVLSKKTESVILSELRTLKFY---------------- 1001

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
              ++E S              Y YLL M+I +L+ E+ + L  + +KL +E+  L   + 
Sbjct: 1002 --KSEGS--------------YKYLLDMSISSLSTERAEKLRIEAEKLKKELSILENTSR 1045

Query: 1167 ESLWVKDL 1174
              +W  DL
Sbjct: 1046 TQMWNDDL 1053


>gi|155122232|gb|ABT14100.1| hypothetical protein MT325_M546R [Paramecium bursaria chlorella virus
            MT325]
          Length = 1058

 Score =  916 bits (2368), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 528/1149 (45%), Positives = 713/1149 (62%), Gaps = 103/1149 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ EH+L RPDTY+GS+EK  +  ++Y+    T   + + Y P   KIFDEILVN+
Sbjct: 5    YIKLSQREHVLARPDTYVGSVEKELRNDFVYDGAKIT--KKDVLYSPAFLKIFDEILVNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV I +  D ISV+N G  +P+E   +EGVY+PE+IFGHLL+  N+D
Sbjct: 63   ADCFNRGGAMSTLKVAISK--DSISVYNDGCSIPLE-KNDEGVYIPEMIFGHLLSGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS  F++E  DG    KY Q +++NM   S+  I+K  + 
Sbjct: 120  DTEERTGAGRNGYGSKLTNIFSKTFVVEIYDGSH--KYVQSWSDNMISVSKAKITKSSKV 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  SF PDLA+F M  ++DD  +++ +RV D+A  LG SV+V L+G R+ VK+  +Y
Sbjct: 178  PSIT-TSFVPDLARFGMADIDDDTRSILVRRVYDMAAVLG-SVRVFLDGKRLDVKTPLDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
              +Y      F     + W I V     +F  VSFVN  A  +GGTHVD V N +A  V+
Sbjct: 236  FKLYTNEKVVFESA--DGWSIGVA-PANEFACVSFVNASAA-RGGTHVDTVVNSIAKAVV 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
               +KK     VK   VKN L+VFVNA + NP F SQTK+ LT R   F      S  FL
Sbjct: 292  EAASKKK--TIVKPAMVKNKLFVFVNAKVVNPTFSSQTKDILTSRNIKFSP----SAAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK T    +++ +++  N ++S    + LKK DG K   + GI KL DA  AG +NS  C
Sbjct: 346  KKATGL--VLDAVIAETNVRESLVDARLLKKTDGVKKTRLTGIKKLTDAAWAGTKNSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + +  N+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSIAANAEIAAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LQVGKTYKDASSLRYGSVMLMTDA----------------------------DVDGSHIS 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
             L++NF H+ +PSLL +P FL +F TPIV A+ +   +  FYS+PDYE+WK++   + + 
Sbjct: 496  ALVMNFFHAQFPSLLAVPGFLKKFSTPIVVAS-RGKDIKEFYSLPDYESWKQNTA-DCAK 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            WSIKY+KGLGTSTS++ K+YF+N+    K F W +D  GE I+ +F+K + + RK WLL 
Sbjct: 554  WSIKYFKGLGTSTSEDAKKYFKNLKSLVKIFGWTEDS-GELIDRSFNKSRPDERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQ +  I   DF++KELILFS  D++RSIPS+VDGLKP QRKILF +FKRN  
Sbjct: 613  FQPGNQLDQSKTNIPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAFKRNLT 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQFSGYV+EHS YHHGEQSL   I+GMAQD+VGSNN+NLL PNGQFG+R  GGKD
Sbjct: 673  NEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRILGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
             ASARYIFT+LSP+TR +F + DD LL YL +DG  IEP WY+P IP +LVNG+ GIGTG
Sbjct: 733  CASARYIFTKLSPVTRQVFNQADDVLLKYLEDDGSSIEPEWYVPAIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNP+DI+ NV+RL++G+ M PM PWY+ F G+I +  +     T+T  G + +
Sbjct: 793  FSTDIPSYNPKDIINNVKRLISGKEMVPMTPWYKEFTGSIVQNDNG----TFTCKG-VAK 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            V+  ++ + ELPI  WT DY++FLE ++++    I  FR+   +  V FE+    E    
Sbjct: 848  VSGKSVVVSELPIGTWTSDYKDFLEGLVEKK--VIVDFREKHTEKNVLFEIDFPGEPD-- 903

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                  L   KL   I T+NMH FD +G IKKY  P  I+ ++F +R  FY KRK   L+
Sbjct: 904  ------LSILKLEKAIRTTNMHAFDPEGKIKKYADPLDIILDWFEVRKTFYTKRKNYLLK 957

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L  +    ENK RFI  +VN E+V++ +  + +L ELR   F                 
Sbjct: 958  DLSHKAAIAENKHRFITLIVNDELVLSKKTESVILSELRTLKFY---------------- 1001

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
              ++E S              Y YLL M+I +LTLE+ + L  + +KL +E+  L   + 
Sbjct: 1002 --KSEGS--------------YKYLLDMSISSLTLERAEKLRIEAEKLKKELSILENTSR 1045

Query: 1167 ESLWVKDLD 1175
              +W  DL+
Sbjct: 1046 TQMWNTDLN 1054


>gi|448929697|gb|AGE53264.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus Fr5L]
          Length = 1058

 Score =  915 bits (2364), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/1151 (45%), Positives = 715/1151 (62%), Gaps = 103/1151 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ EH+L RPDTY+G++EK  +  ++Y+    T   + + Y P   KIFDEILVN+
Sbjct: 5    YIKLSQREHVLARPDTYVGAVEKELRNDFVYDGAKIT--KKDVLYSPAFLKIFDEILVNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV I +  D ISV+N G  +P+E   +EG+Y+PE+IFGHLL+  N+D
Sbjct: 63   ADCFNRGGAMTTLKVTISK--DSISVYNDGCSIPLE-KNDEGIYIPEMIFGHLLSGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS  F +E  D     KY Q +++NM   S+  I+K  + 
Sbjct: 120  DTEERTGAGRNGYGSKLTNIFSKTFAVEIYDSSH--KYVQSWSDNMISVSKAKITKSSKV 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  SF PDLA+F M  ++DD  +++ +RV D+A  LG SV+V L+G R+ VK+  +Y
Sbjct: 178  PSIT-TSFVPDLARFGMVDIDDDTRSILVRRVYDMAAVLG-SVRVFLDGKRLDVKTPLDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
              +Y      F     + W I V     +F  VSFVN  A  +GGTHVD V N +A  V+
Sbjct: 236  FKLYTDEKVVFE--TADGWSIGVA-PANEFACVSFVNASAA-RGGTHVDAVVNSIAKAVV 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
               +KK     VK   VKN L+VFVNA + NP F SQTK+ LT R   F      S  FL
Sbjct: 292  EAASKKK--TIVKPAMVKNKLFVFVNAKVVNPTFSSQTKDILTSRNIKFSP----SATFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK T  S +++ +++  N ++S    + LKK DG K   + G+ KL DA  AG +NS  C
Sbjct: 346  KKAT--SLVLDAVIAETNVRESLVDARLLKKTDGVKKTRLTGVKKLTDAAWAGTKNSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + +  N+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSIAANAEIAAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LQVGKTYKDASSLRYGSVMLMTDA----------------------------DVDGSHIS 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
             L++NF H+ +PSLL +P FL +F TPIV A+ +   +  FYS+PDYE+WK++   + + 
Sbjct: 496  ALVMNFFHAQFPSLLAVPGFLKKFSTPIVVAS-RGKDINEFYSLPDYESWKQNTA-DCAK 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            WSIKY+KGLGTSTS++ K+YF+N+    K F W +D  GE I+ +F+K + + RK WLL 
Sbjct: 554  WSIKYFKGLGTSTSEDAKKYFKNLKSLVKIFGWTEDS-GELIDRSFNKSRPDERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQ +  I   DF++KELILFS  D++RSIPS+VDGLKP QRKILF +FKRN  
Sbjct: 613  FQPGNQLDQSKTNIPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAFKRNLT 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQFSGYV+EHS YHHGEQSL   I+GMAQD+VGSNN+NLL PNGQFG+R  GGKD
Sbjct: 673  NEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRILGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
             ASARYIFT+LSP+TR +F + DD LL YL +DG  IEP WY+P IP +LVNG+ GIGTG
Sbjct: 733  CASARYIFTKLSPVTRQVFNQSDDVLLKYLEDDGSSIEPEWYVPAIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNP+DI+ NV+RL++G+ M PM PWY+GF GTI +  +     T+T  G + +
Sbjct: 793  FSTDIPSYNPKDIIDNVKRLISGKEMMPMTPWYKGFTGTIVQNDNG----TFTCKG-VAK 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            V+  ++ + ELP+  WT DY++FLE ++++    I  FR+   +  V FE+  + E  + 
Sbjct: 848  VSGKSVVVSELPVGTWTSDYKDFLEGLVEKK--IIVDFREKHTEKNVLFEIDYTGEPDIS 905

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                      KL   I T+NMH FD +G IKKY     I+ ++F +R  FY KRK   L+
Sbjct: 906  I--------LKLEKVIRTTNMHAFDPQGKIKKYACSLDIIRDWFEVRKTFYTKRKNYLLK 957

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L  +    ENK RFI  +VN E+V++ +  + +L ELR   F                 
Sbjct: 958  DLSHKAAIAENKHRFITLIVNDELVLSKKTESVILSELRTLKFY---------------- 1001

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
              ++E S              Y YLL M+I +LTLE+ + L  + +KL +E+  L+  + 
Sbjct: 1002 --KSEGS--------------YKYLLDMSISSLTLERAEKLRLEAEKLKKELCILQNTSR 1045

Query: 1167 ESLWVKDLDAL 1177
              +W  DL+ +
Sbjct: 1046 TQMWSDDLNNI 1056


>gi|155370647|ref|YP_001426181.1| hypothetical protein FR483_N549R [Paramecium bursaria Chlorella virus
            FR483]
 gi|155123967|gb|ABT15834.1| hypothetical protein FR483_N549R [Paramecium bursaria Chlorella virus
            FR483]
          Length = 1058

 Score =  911 bits (2354), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/1149 (45%), Positives = 713/1149 (62%), Gaps = 103/1149 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ EH+L RPDTY+G++EK  +  ++Y+    T   + + Y P   KIFDEILVN+
Sbjct: 5    YIKLSQREHVLARPDTYVGAVEKELRNDFVYDGAKIT--KKDVLYSPAFLKIFDEILVNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV I +  D ISV+N G  +P+E   +EGVY+PE+IFGHLL+  N+D
Sbjct: 63   ADCFNRGGAMTTLKVAISK--DCISVYNDGCSIPLE-KNDEGVYIPEMIFGHLLSGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS  F +E  DG    KY Q +++NM   S+  I+K  + 
Sbjct: 120  DTEERTGAGRNGYGSKLTNIFSKIFSVEIYDGSH--KYVQSWSDNMISVSKAKITKSSKA 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  SF PDLA+F MT ++DD  +++ +RV D+A  LG SV+V L+G R+ VK+  +Y
Sbjct: 178  PSIT-TSFVPDLARFGMTDIDDDTRSILVRRVYDMAAVLG-SVRVFLDGKRLEVKTPLDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
              +Y      F     + W I V     +F  VSFVN  A  +GGTHVD V N +A  V+
Sbjct: 236  FKLYTDEKVVFESA--DGWSIGVA-PANEFACVSFVNASAA-RGGTHVDAVVNSIAKAVV 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
               +KK     VK   VKN L+VFVNA + NP F SQTK+ LT R   F      S  FL
Sbjct: 292  EAASKKK--TIVKPAMVKNKLFVFVNAKVVNPTFSSQTKDILTSRNIKFSP----SAAFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK T    +++ +++  N ++S    + LKK DG K   + GI KL DA  AG +NS  C
Sbjct: 346  KKATGL--VLDAVIAETNVRESLVDARLLKKTDGVKKTRLTGIKKLTDAAWAGTKNSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + +  N+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSIAANAEIAAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LQVGKTYKDASSLRYGSVMLMTDA----------------------------DVDGSHIS 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
             L++NF H+ +PSLL +P FL +F TPIV A+ +   +  FYS+PDYE+WK++   + + 
Sbjct: 496  ALVMNFFHAQFPSLLAVPGFLKKFSTPIVVAS-RGKDINEFYSLPDYESWKQNTA-DCAK 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            WSIKY+KGLGTSTS++ K+YF+N+    K F W +D  GE I+ +F+K + + RK WLL 
Sbjct: 554  WSIKYFKGLGTSTSEDAKKYFKNLKSLVKIFGWTEDS-GELIDRSFNKSRPDERKTWLLD 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQ +  I   DF++KELILFS  D++RSIPS+VDGLKP QRKILF +FKRN +
Sbjct: 613  FQPGNQLDQSKTNIPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAFKRNLV 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
            +E KVAQFSGYVSE S YHHGEQSL   I+GMAQD+VGSNN+NLL PNGQFG+R  GGKD
Sbjct: 673  QEIKVAQFSGYVSEISGYHHGEQSLQGAIVGMAQDYVGSNNMNLLLPNGQFGSRLLGGKD 732

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            +ASARYIFT+LSP+TR +F + DD LL YL +DG  IEP WY+P IP +LVNG+ GIGTG
Sbjct: 733  SASARYIFTKLSPVTRQVFNQADDVLLKYLEDDGSSIEPEWYVPAIPFLLVNGANGIGTG 792

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +S+ IP+YNP+DI+ NV+RL++G+ M PM PWY+ F G+I +  +     T+T  G + +
Sbjct: 793  FSTDIPSYNPKDIIDNVKRLISGKEMVPMSPWYKEFTGSIVQNDNG----TFTCKG-VAK 847

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
            V+   + + ELPI  WT DY++FLE ++++    I  FR+   +  V FE+  S E  + 
Sbjct: 848  VSGKNVVVSELPIGTWTSDYKDFLEGLVEKK--VIVDFREKHTEKNVLFEIDYSGEPDIS 905

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                      KL   I T+NMH FD +G IKKY     I+ ++F +R  FY KRK   ++
Sbjct: 906  I--------LKLEKVIRTTNMHAFDPQGKIKKYACSLDIIRDWFEVRKTFYTKRKAYLIK 957

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L  +    ENK RFI  +VN E+V++ +  + +L ELR      F K+  S        
Sbjct: 958  DLSHKAAIAENKHRFITLIVNDELVLSKKTESVILSELRT---LKFYKSDGS-------- 1006

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
                                 Y YLL M+I +LTLE+ + L  + +KL +E+  L   + 
Sbjct: 1007 ---------------------YKYLLDMSISSLTLERAEKLRLEAEKLKKELTILENTSL 1045

Query: 1167 ESLWVKDLD 1175
              +W  DL+
Sbjct: 1046 VQMWNTDLN 1054


>gi|378706339|gb|AFC35140.1| hypothetical protein OtV6_232c [Ostreococcus tauri virus RT-2011]
          Length = 1071

 Score =  905 bits (2340), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 502/1160 (43%), Positives = 697/1160 (60%), Gaps = 107/1160 (9%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E  QK + +EH+L RPD+Y+G ++K  ++ W+    +K    + ISY P L KIFDEILV
Sbjct: 2    ESVQKLTHVEHVLKRPDSYVGPVDKTHESYWLLNNTNKNFQKKNISYSPALLKIFDEILV 61

Query: 89   NAADNKQRDPK-MDAVKVVIDQEHDLISVHNSG--DGVPVEIHQEEGVYVPELIFGHLLT 145
            NA D     PK +  + V +D+E   +++ N+G   G+ V+++++EGV+ PEL FGHLLT
Sbjct: 62   NAIDRNSLHPKNVTQISVSVDKETGAVTIENNGPLGGISVKMNEKEGVWNPELTFGHLLT 121

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            S+NYDD+ K+  GGRNGYGAKLTNI+S++F I   DG+  K Y Q +++NM     P ++
Sbjct: 122  STNYDDSQKRIVGGRNGYGAKLTNIYSSQFSIIIKDGEEKKTYTQKWSDNMTTCHPPKLT 181

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K     +   ++F PD  +F M  L+ ++  + +KRV D   C   + KV+  G  +P  
Sbjct: 182  KHSATTSSVSITFTPDWKRFGMKELDINIYKIFEKRVWDANICTTPNCKVKFQGEALPKT 241

Query: 266  SFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQV 325
            SF  Y  M+ + VT       +RW +CV  SE   +QVSFVNGI T KGGTHVDYVA+ +
Sbjct: 242  SFEAYAKMH-EGVTDVCSVTTDRWSVCVGPSENGLEQVSFVNGICTNKGGTHVDYVASYL 300

Query: 326  ANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL 385
            A+    ++++  K   +K   VKN   +FV A ++NP F SQ K   T +   FGSK E 
Sbjct: 301  AS---GIIDEMAKKIKLKPQQVKNTFNIFVKATLENPTFSSQVKSECTSKVQDFGSKFEP 357

Query: 386  SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQ 445
             + F+K    K+GI + L + + FK+ K+LKK DG +   + GI KL+DAN AG   S +
Sbjct: 358  PKNFVKNA-LKTGISDELTALSKFKEMKELKKTDGARKSKITGIPKLDDANKAGTAQSSK 416

Query: 446  CTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKIL 505
            CTLI+TEGDSAK LA+AGLSVVGRD +GVFPLRGK  NVR+AS  Q+ +N E  ++KKIL
Sbjct: 417  CTLIVTEGDSAKTLAVAGLSVVGRDHYGVFPLRGKCKNVRDASVAQLTSNQEFNDLKKIL 476

Query: 506  GLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
            GL+QG EY +V  LRYG LMIMTD                             D+DGSHI
Sbjct: 477  GLQQGKEYKDVTELRYGRLMIMTDA----------------------------DNDGSHI 508

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNAS 625
            KGL++N IH FWPSLLK+  F+V  +TPI+KAT K  +  SFY+   +  W    G    
Sbjct: 509  KGLILNMIHYFWPSLLKL-GFVVSMVTPIIKAT-KGSQTKSFYTDSAFRTW---YGNGQQ 563

Query: 626  SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD---GEAIELAFSKKKIEARKK 682
             W IKYYKGLGTSTS E +EYF+ I    +D   + D D    ++I LAF KKK + RK 
Sbjct: 564  GWRIKYYKGLGTSTSAEAREYFKKI----QDLTVKFDHDIMTDKSIVLAFDKKKADDRKS 619

Query: 683  WLLQFEPGNHLDQKEKYIKY--------SDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            WLL+       D +E  + Y        +DFV+K+L+ FS+ADL+RSI  M DGLKP QR
Sbjct: 620  WLLE---STAKDSRELEVPYGNVKQLGITDFVHKDLVNFSLADLKRSIAHMADGLKPSQR 676

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+++  F +N   E KVAQ + YV++ SAYHHGE SLA TI+ +A D+ GSNNINLL+P 
Sbjct: 677  KVMYACFHKNLKDEMKVAQLAAYVADKSAYHHGEVSLADTIVKLANDYTGSNNINLLEPC 736

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            GQFGTR  GGKDA+  RYIFT+L+   R +F   DD +L+YL++DG+ IEP +YMP +P 
Sbjct: 737  GQFGTRLMGGKDASQTRYIFTKLTKDARKIFDARDDPVLNYLDDDGRPIEPDFYMPTLPM 796

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            VLVNG+EGIGTG+S Y+P +NP+DI  N++R+L+G  +  M PW+RGF G +     KE 
Sbjct: 797  VLVNGTEGIGTGFSCYVPPFNPKDIKENIQRMLSGMSLREMTPWFRGFKGKV----FKED 852

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVD 974
            G ++   GI  +   + L++ ELP  RWTQDY+E+L++++++    I  F   S    VD
Sbjct: 853  G-SWVTEGIWRDTG-SRLKVTELPPGRWTQDYKEYLDTLVEKK--VITNFTNNSTTEDVD 908

Query: 975  FEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRL 1034
            FE+       M    + L+K  KL  T  TSNMHLF     I KY +PE+IL++F  +RL
Sbjct: 909  FEI-------MGYSGKDLIKDLKLRKTFHTSNMHLFHPVKGIHKYSSPEEILKDFVELRL 961

Query: 1035 EFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPK 1094
            + Y KRK+  ++ L+        K +F++ V+ G+IVV  RK+ DL  +L Q     FPK
Sbjct: 962  DHYVKRKEHLIKVLQTRATMCGYKSKFVMMVIEGDIVVFKRKKDDLERQLVQ----TFPK 1017

Query: 1095 NSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKL 1154
                      G T                    YDYLL++     T E VQ LL +  + 
Sbjct: 1018 ---------IGGT--------------------YDYLLNIKTVQYTEECVQELLKESKQA 1048

Query: 1155 NEEVDDLRKATPESLWVKDL 1174
             EE++ ++  +   +W  D+
Sbjct: 1049 KEELEVMKNTSHIDMWKMDI 1068


>gi|170591240|ref|XP_001900378.1| DNA gyrase/topoisomerase IV, A subunit family protein [Brugia malayi]
 gi|158591990|gb|EDP30592.1| DNA gyrase/topoisomerase IV, A subunit family protein [Brugia malayi]
          Length = 1178

 Score =  903 bits (2334), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/1174 (42%), Positives = 732/1174 (62%), Gaps = 83/1174 (7%)

Query: 29   EMYQKKSQLEHILLRPDTYIG-SIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEIL 87
            E YQ+ + L+HIL RPD+YIG +     Q +++Y++ +K ++ +    VPGL KIFDEIL
Sbjct: 63   EKYQRLTPLKHILYRPDSYIGPTFLSDEQPIYVYDDITKQILKKEARIVPGLLKIFDEIL 122

Query: 88   VNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
            VNAADNK+RDP+M  + + ID+E + IS+ N+G G+PVEIH  EG+YVP +IFG L TSS
Sbjct: 123  VNAADNKRRDPQMTTIAINIDKERNTISIWNNGRGIPVEIHPREGIYVPTMIFGTLFTSS 182

Query: 148  NYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKC 207
            NYDD+  K  GGRNG+GAKL NIFSTEF +ET   +   ++ Q + NNM    +P IS  
Sbjct: 183  NYDDSELKIVGGRNGFGAKLCNIFSTEFSVETCTKQSGLRFFQCWRNNMNDVDDPIISDA 242

Query: 208  K-EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
                 ++T V+FKPDL+KF ++ L++D + +M +R+VD+AG L   V V LNG ++ V  
Sbjct: 243  STNASDYTCVTFKPDLSKFKLSTLDEDTIQVMIRRIVDIAGTL-DGVNVFLNGTKIEVSG 301

Query: 267  FAEYVDMYP--------KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
            F +YV ++          S    +  VN+RW+I V  S+  +  +SFVN I T+KGG HV
Sbjct: 302  FKDYVKLFSTYTGESVENSTVPSYCSVNDRWQIAVARSDTGYNHISFVNNINTLKGGRHV 361

Query: 319  DYVANQVANHVMAVVNKK-NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQS 377
            DY+ NQ+ + +   +N++   +  + AH +KN L +FVN+LI+NPAF+SQ+KE LT    
Sbjct: 362  DYIVNQIVSRLKHEINQRYGCDKFISAHQIKNRLHIFVNSLIENPAFESQSKEYLTTSVK 421

Query: 378  SFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANL 437
            +FGS C + E F +     S I+  LL   + + +  L ++      D   +SKLEDA  
Sbjct: 422  NFGSTCIVPESFYENFIKDSDIIHHLLCDISQQHTTSLNRSMNRSLWD---LSKLEDAAD 478

Query: 438  AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
            AG +N   CTLI+TEGDSAKALA+AGL+V+GR ++GVFP+RGKL NVR   +   + N+E
Sbjct: 479  AGTKNGCNCTLIITEGDSAKALAVAGLAVIGRKQYGVFPIRGKLTNVRGMDAKMAVENAE 538

Query: 498  IGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
            I  + +ILGLK G  Y++   +KSLRYG L+IMTDQ                        
Sbjct: 539  ISALVRILGLKFGENYSSHEKLKSLRYGRLLIMTDQ------------------------ 574

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYE 614
                D DGSHIKGL++NF+H +WPSLLK  +++  FITP++KA  +   + SFYS  DYE
Sbjct: 575  ----DPDGSHIKGLIVNFLHVYWPSLLK-ANYVSYFITPLLKA-KRGSDIKSFYSTADYE 628

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
             W+     ++  +SIKYYKGLGTS++KE +EYF +I  H  +F+++     E+IELAF+K
Sbjct: 629  KWRAE-NPDSVKYSIKYYKGLGTSSAKEAREYFNDIERHTVNFIYDGKISDESIELAFAK 687

Query: 675  KKIEARKKWLLQFEP---GNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKP 731
             K + RK W+ +         +D       +S+FVN+EL+ +S  DL+RS+P++VDGLKP
Sbjct: 688  NKADDRKVWIAESSKLLLSTAVDSNRNQKTFSEFVNEELVEYSQLDLRRSLPNVVDGLKP 747

Query: 732  GQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLL 791
             QRK+LF  F R    E +V+Q +G VS++  YHHGE+SL +TI+ +AQDFVGSNN+NLL
Sbjct: 748  SQRKVLFTMFGRYERGEIRVSQLAGAVSQYCGYHHGEESLVNTIVRLAQDFVGSNNLNLL 807

Query: 792  QPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPI 851
             P GQFGTR  GG+D ASARYI+T LSP+ R +FP  DDK+L  L E+   +EP WY PI
Sbjct: 808  LPLGQFGTRLSGGEDVASARYIYTSLSPLARAIFPHPDDKVLKNLVEENALVEPEWYCPI 867

Query: 852  IPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTAS 911
            IP +L+NG+EGIGTGW++ I    PR +++N +RL++G  ++ M P +R F GTI +TA 
Sbjct: 868  IPMILINGAEGIGTGWATKILPRCPRQVISNAQRLIDGRPLQDMLPHFRKFQGTIYETAP 927

Query: 912  KEAGVTYTVTGIIEEVN-ETTLR--IKELPIRRWTQDYRE-FLESIIDQNDSFIRGFRQY 967
            ++    Y+++G +     ++ LR  I ELP   W   Y+E  L+S I   +  I  + + 
Sbjct: 928  RQ----YSISGKVSYRRLKSGLRAIITELPTGIWNNKYKEKVLDSAI--KNGIISNYEEL 981

Query: 968  SDDTTVDFEVFLSEESMMRTKQE--GLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQI 1025
              ++ V F + + ++ ++  K++   L +  KL +  S ++M LFD K V++KYD+  +I
Sbjct: 982  HTESNVHFILHVIDKPLLSDKKQIKALNRLLKLRSVASENSMILFDEKNVLQKYDSTREI 1041

Query: 1026 LEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELR 1085
             +EFF +R + Y +R++ +L  +E +L  +EN+VRF+  ++NGEI++  + R +++ +L 
Sbjct: 1042 FQEFFEVRRQKYIERRECELVIMEGKLKFIENQVRFVNAIINGEIIIKKKNRAEIIAQLA 1101

Query: 1086 QKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQ 1145
            +KGF   P  +K+       ATD       NP         D+ YLL M +  L+ E++ 
Sbjct: 1102 EKGFDSNPMKAKN-------ATD----GNCNPP--------DFAYLLDMPLCRLSNEEIL 1142

Query: 1146 GLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
             L   R +L E    L+  T  SLW  DL+ L +
Sbjct: 1143 VLQEKRSQLWERFKSLKSTTWRSLWSMDLNVLSV 1176


>gi|313768427|ref|YP_004062107.1| hypothetical protein MpV1_224c [Micromonas sp. RCC1109 virus MpV1]
 gi|312599123|gb|ADQ91147.1| hypothetical protein MpV1_224c [Micromonas sp. RCC1109 virus MpV1]
          Length = 1070

 Score =  900 bits (2327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/1160 (43%), Positives = 705/1160 (60%), Gaps = 108/1160 (9%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E  QK + +EHIL RPD+Y+G +E+ ++  WI +    T   + + Y P L KIFDEILV
Sbjct: 2    ESIQKLTHIEHILKRPDSYVGPVEQGSEPYWILD--GSTFTKKNLKYSPALLKIFDEILV 59

Query: 89   NAADNKQRDPK-MDAVKVVIDQEHDLISVHNSG--DGVPVEIHQEEGVYVPELIFGHLLT 145
            NA D     PK + ++ V ID++   +++ N+G   G+ V++H++EG++ PEL+FGHLLT
Sbjct: 60   NAIDRNSLHPKNVSSISVTIDKDVGSVTIENNGPLGGISVKMHEKEGLWNPELVFGHLLT 119

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            S+NYDD+ K+  GGRNGYGAKL NI+S++F I   D +  + Y Q ++ NM     P I 
Sbjct: 120  STNYDDSQKRIVGGRNGYGAKLANIYSSDFSIIIKDHETKQTYTQKWSKNMTVCDPPKIK 179

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K     +   ++F P+  +F M+ ++D + ++ +KRV D   C   + KV+LNG  +P +
Sbjct: 180  KHSGSTSSVSITFTPEWKRFGMSKMDDAIYSIFQKRVWDANICTTSNCKVKLNGEILPKQ 239

Query: 266  SFAEYVDMYP--KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
            +F  Y  M+   K +  F+    +RW +C+  SE   +QVSFVNGI T KGGTH+D+VAN
Sbjct: 240  NFEAYAKMHEGIKDIASFN---GDRWSVCIGPSENGLEQVSFVNGICTTKGGTHIDHVAN 296

Query: 324  QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
             +A+ ++  + KK K   +K   VKN   +FV A ++NP F SQ K   TL+   FGSK 
Sbjct: 297  HIASGIIDDMAKKIK---LKPQQVKNTFTIFVKATLENPTFSSQVKSECTLKAQDFGSKF 353

Query: 384  ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            E  + F+K V  K+GI + L + + FK+ K+LKK DG +   + GI KL+DAN AG   S
Sbjct: 354  EPPKNFVKNV-LKTGIADELTALSKFKEMKELKKTDGARKSKITGIPKLDDANKAGTAQS 412

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
             +CTLI+TEGDSAK LA+AGLSVVGRD +GVFPLRGK  NVR++S  Q+ +N E  ++KK
Sbjct: 413  GKCTLIVTEGDSAKTLAVAGLSVVGRDHYGVFPLRGKCKNVRDSSVAQLTSNQEFNDLKK 472

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+QG EY +V  LRYG LMIMTD                             D+DGS
Sbjct: 473  ILGLQQGKEYKDVSELRYGRLMIMTDA----------------------------DNDGS 504

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
            HIKGL++N IH FWPSLLK+ +F+V  +TPI+KAT K     SFY+   +  W    G  
Sbjct: 505  HIKGLILNMIHYFWPSLLKM-NFVVSMVTPIIKAT-KGSDTKSFYTDSAFRTW---YGSG 559

Query: 624  ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD---GEAIELAFSKKKIEAR 680
             S W IKYYKGLGTSTS E +EYF+ I    +D   + D D    ++I LAF KKK +AR
Sbjct: 560  KSGWKIKYYKGLGTSTSAEAREYFKKI----QDLTVKFDADTMTDDSIILAFDKKKADAR 615

Query: 681  KKWLLQFEPGNHLDQKE------KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            K WLL+       +Q E      K +  +DFV+K+L+ FS+ADL+RSI  + DGLKP QR
Sbjct: 616  KAWLLE-STAKEANQLEIPYGDVKQLNITDFVHKDLVNFSLADLKRSIAHVADGLKPSQR 674

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+++  F++N   E KVAQ + YV+E SAYHHGE SLA TI+ +A D+ GSNNINLL+P 
Sbjct: 675  KVMYSCFQKNLKDEMKVAQLAAYVAEKSAYHHGEVSLAETIVKLANDYTGSNNINLLEPC 734

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            GQFGTR  GGKDA+  RYIFT+L+   R LF   DD +L+YL++DG+ IEP +YMP +P 
Sbjct: 735  GQFGTRLMGGKDASQTRYIFTKLTKEARKLFDPKDDAILNYLDDDGRSIEPDFYMPTLPM 794

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            VLVNG+EGIGTG+S YIP +NP DI  N++R L GE    M PW+RGF G + K    + 
Sbjct: 795  VLVNGTEGIGTGFSCYIPPFNPDDIKENIKRSLEGESPIDMKPWFRGFKGKVFK---DDV 851

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVD 974
            G+ +   G+  +   + L++ ELP  RWTQDY+E+L++++D+    I  F   S    VD
Sbjct: 852  GL-WITEGVWRDTG-SRLKVTELPPGRWTQDYKEYLDTLVDKK--MITSFTNNSTTEDVD 907

Query: 975  FEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRL 1034
            FE+F           + L+K  KL  T  T+NMHLF     I KY +PE+IL++F  +RL
Sbjct: 908  FEIF-------GYSGKDLIKDLKLRKTFHTTNMHLFHPTKGIYKYTSPEEILKDFVELRL 960

Query: 1035 EFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPK 1094
            E Y+KRK   ++ LE       +K +F+  V+ G +VV  RK+ DL  E+     + FPK
Sbjct: 961  EHYKKRKAHLIDVLEKRAEMCGHKSKFVSMVIEGRLVVFKRKKQDLEKEMS----SIFPK 1016

Query: 1095 NSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKL 1154
                                     ++G    ++DYLL+      T E+V+ L+ +  + 
Sbjct: 1017 -------------------------IDG----NWDYLLNTKTVEYTDERVKALMDEAKQA 1047

Query: 1155 NEEVDDLRKATPESLWVKDL 1174
            N +++ + + +  ++W  D+
Sbjct: 1048 NVDLERMIRTSHITMWKMDI 1067


>gi|357542191|gb|AET84951.1| DNA topoisomerase IIB [Micromonas pusilla virus SP1]
          Length = 1070

 Score =  900 bits (2326), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/1157 (42%), Positives = 702/1157 (60%), Gaps = 102/1157 (8%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E  QK + +EHIL RPD+Y+G +E  T+  W+ + ++ T   + + Y P L KIFDEILV
Sbjct: 2    ESVQKLTHIEHILKRPDSYVGPVELGTEHYWVLQGDAFT--KKNLKYSPALLKIFDEILV 59

Query: 89   NAADNKQRDPK-MDAVKVVIDQEHDLISVHNSG--DGVPVEIHQEEGVYVPELIFGHLLT 145
            NA D     PK + ++ V ID++   +++ N+G   G+ V +H++EG++ PEL FGHLLT
Sbjct: 60   NAIDRNSLHPKGVTSISVSIDKDQGSVTIENNGPLGGIGVRMHEKEGLWNPELTFGHLLT 119

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            S+NYDDN K+  GGRNGYGAKLTNI+S+EF +   D +  + Y Q ++NNM    +P I 
Sbjct: 120  STNYDDNQKRVVGGRNGYGAKLTNIYSSEFSVIIKDHEVKQTYTQGWSNNMTTCHQPKIK 179

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K     +   ++F PD  +F M+ ++D +  + +KRV D   C   + KV+ NG  +P  
Sbjct: 180  KHAGAMSSVSITFTPDWKRFGMSKMDDSIYQIFQKRVWDANICTTPNCKVKFNGDVLPKT 239

Query: 266  SFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQV 325
            SF  Y  M+ + V      V++RW +C+  +E   +QVSFVNGI T KGG HVD+VA+ V
Sbjct: 240  SFEAYAKMH-EGVENVCSVVSDRWSVCIGPAENGMEQVSFVNGICTTKGGNHVDHVASLV 298

Query: 326  ANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL 385
            A+ ++  + KK K   +K   VKN   +FV A ++NP F SQ K   T +   FGSK + 
Sbjct: 299  ASGIIEDMAKKIK---LKPQQVKNTFNIFVKATLENPTFSSQVKSECTSKSQDFGSKFDP 355

Query: 386  SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQ 445
             + F+K    K+GI + LL+ + FK+ K+LKK+DG +   + GI KL+DAN AG   S +
Sbjct: 356  PKNFIKNA-LKTGIQDELLALSKFKEMKELKKSDGARKSKITGIPKLDDANKAGTAQSGK 414

Query: 446  CTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKIL 505
            CTLI+TEGDSAK LA+AGLSVVGRD +GVFPLRGK  NVR+ S  Q+ +N E  ++KKIL
Sbjct: 415  CTLIVTEGDSAKTLAVAGLSVVGRDHYGVFPLRGKCKNVRDVSVAQLSSNQEFNDLKKIL 474

Query: 506  GLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
            GL+QG +Y +V  LRYG LMIMTD                             D+DGSHI
Sbjct: 475  GLQQGKDYKDVSELRYGRLMIMTDA----------------------------DNDGSHI 506

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNAS 625
            KGL++N IH FWPSLLK+  F+V  +TPI+KAT K  + +SFY+   + +W    G   +
Sbjct: 507  KGLILNMIHYFWPSLLKL-GFVVSMVTPIIKAT-KGSETMSFYTDSAFRSW---YGSGKA 561

Query: 626  SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD---GEAIELAFSKKKIEARKK 682
             W IKYYKGLGTSTS E +EYF+ I    +D   + D D     +I LAF KK  ++RK 
Sbjct: 562  GWKIKYYKGLGTSTSVEAREYFKKI----QDLTVKFDMDVMTDTSIVLAFDKKMADSRKT 617

Query: 683  WLLQFEPGNHLDQKEKY-----IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKIL 737
            WLL        + +  Y     +  +DFV+K+L+ FS+ADL+RSI  + DGLKP QRK++
Sbjct: 618  WLLDSTAKEASELEVPYGNVKQLDITDFVHKDLVNFSLADLKRSIAHVADGLKPSQRKVM 677

Query: 738  FCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQF 797
            +  F++N   E KVAQ + YV+E SAYHHGE SLA TI+ +A D+ GSNNINLL+P GQF
Sbjct: 678  YSCFQKNLKDEMKVAQLAAYVAEKSAYHHGEVSLADTIVKLANDYTGSNNINLLEPCGQF 737

Query: 798  GTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLV 857
            GTR  GGKDA+  RYIFT+L+   R LF   DD +L+YL++DG+ IEP +YMP +P VLV
Sbjct: 738  GTRLMGGKDASQTRYIFTKLTKEARKLFDPKDDAVLNYLDDDGRPIEPDFYMPTLPMVLV 797

Query: 858  NGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVT 917
            NG+EGIGTG+S Y+P +NP+DI  N++R L GE +  M PW+RGF G + K    +AG+ 
Sbjct: 798  NGTEGIGTGFSCYVPPFNPKDIKENIKRTLEGEDLIEMKPWFRGFKGRVYK---DDAGL- 853

Query: 918  YTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV 977
            +   GI  +   + L++ ELP  RWTQDY+E+L++++++    I  +   S    VDFE+
Sbjct: 854  WITEGIYRDTG-SRLKVTELPPGRWTQDYKEYLDTLVEKK--MINSYTNNSTTEDVDFEI 910

Query: 978  FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFY 1037
            F           + L+K  K+  T  TSNMHLF     I KY   E+IL++F  +RLE Y
Sbjct: 911  F-------GYTGKDLMKDLKMKKTFHTSNMHLFHPTRGIHKYANAEEILKDFVELRLEHY 963

Query: 1038 EKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSK 1097
            +KRK   ++ L+   +   ++ +F+  V+ G++VV  +K+ DL  E+ Q     FPK   
Sbjct: 964  KKRKAHLVDVLQKRAVMCGHRAKFVSMVIEGDLVVFKKKKKDLEAEMSQ----TFPK--- 1016

Query: 1098 SIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEE 1157
             IE                          +YDYLL++     T E V  LL +  + NEE
Sbjct: 1017 -IEG-------------------------NYDYLLNIKTVQYTEESVASLLKESKEANEE 1050

Query: 1158 VDDLRKATPESLWVKDL 1174
            ++ + K +  ++W  D+
Sbjct: 1051 LERIMKTSHLTMWKMDI 1067


>gi|163955216|ref|YP_001648320.1| hypothetical protein OsV5_244r [Ostreococcus virus OsV5]
 gi|163638665|gb|ABY28024.1| hypothetical protein OsV5_244r [Ostreococcus virus OsV5]
          Length = 1072

 Score =  895 bits (2314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/1160 (42%), Positives = 694/1160 (59%), Gaps = 107/1160 (9%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E  QK + +EH+L RPD+Y+G +E   +  WI+++       ++++Y P L KIFDEILV
Sbjct: 3    ESVQKLTHIEHVLKRPDSYVGPVEIGCEPYWIFQKTDNQFKKKSLNYSPALLKIFDEILV 62

Query: 89   NAADNKQRDPK-MDAVKVVIDQEHDLISVHNSG--DGVPVEIHQEEGVYVPELIFGHLLT 145
            NA D     PK    +   ID+E   +++ N+G   GV V +H++EG++ PEL FGHLLT
Sbjct: 63   NAIDRNSLHPKSCTLISAGIDKETGAVTIENNGPLGGVGVRMHEKEGIWNPELTFGHLLT 122

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            S+NYDDN K+  GGRNGYGAKLTNI+S+EF I   DG+  + Y Q + NNM     P I+
Sbjct: 123  STNYDDNKKRIVGGRNGYGAKLTNIYSSEFSIVIKDGETKQCYTQKWNNNMTVCHPPKIT 182

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K     +   ++F PD  +F M  +++++  + +KRV D   C   + KV+  G  +P  
Sbjct: 183  KHSASTSSVSITFIPDWKRFGMNKMDNNIYKIFEKRVWDANICTTPNCKVKFQGEALPKT 242

Query: 266  SFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQV 325
            SF  Y  M+ + V+       +RW +C+  SE   +QVSFVNGI T KGGTHVD+VA+ +
Sbjct: 243  SFEAYAKMH-EGVSEVSSVTTDRWSVCIGPSENGLEQVSFVNGICTTKGGTHVDHVASYI 301

Query: 326  ANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL 385
            A+    ++++  K   +K   VKN   +FV A ++NP F SQ K   T +   FGSK E 
Sbjct: 302  AS---GIIDEMAKKIKLKPQQVKNTFNIFVKATLENPTFSSQVKSECTSKAQDFGSKFEP 358

Query: 386  SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQ 445
             + F+K    K+GI E L + + FK+ K+LKK DG +   + GI KL+DAN AG   S +
Sbjct: 359  PKNFVKNA-LKTGIQEELTALSKFKEMKELKKTDGARKSKITGIPKLDDANKAGTAQSGK 417

Query: 446  CTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKIL 505
            CTLI+TEGDSAK LA+AGLSVVGRD +GVFPLRGK  NVR+AS  Q+ +N E  ++KKIL
Sbjct: 418  CTLIVTEGDSAKTLAVAGLSVVGRDHYGVFPLRGKCKNVRDASVAQLTSNQEFNDLKKIL 477

Query: 506  GLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
            GL+QG EY +V  LRYG LMIMTD                             D+DGSHI
Sbjct: 478  GLQQGKEYQDVSELRYGRLMIMTDA----------------------------DNDGSHI 509

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNAS 625
            KGL++N IH FWPSLLK+  F+V  +TPI+KA+ K  +  SFY+   + +W    G    
Sbjct: 510  KGLILNMIHYFWPSLLKL-GFVVSMVTPIIKAS-KGTQSKSFYTDSAFRSW---YGNGQP 564

Query: 626  SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD---GEAIELAFSKKKIEARKK 682
             W IKYYKGLGTSTS E +EYF+ I    +D   + D D    ++I LAF KKK + RK 
Sbjct: 565  GWKIKYYKGLGTSTSAEAREYFKKI----QDLTVKFDMDIMTDKSIVLAFDKKKADDRKT 620

Query: 683  WLLQFEPGNHLDQKEKYIKY--------SDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            WLL+       D KE  + Y        + FV K+L+ FS+ADL+RSI  M DGLKP QR
Sbjct: 621  WLLE---STAKDPKELEVPYGSVKNLSITHFVRKDLVNFSLADLKRSIAHMADGLKPSQR 677

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+++  F +N   E KVAQ + YV++ SAYHHGE SLA TI+ +A D++GSNNINLL+P 
Sbjct: 678  KVMYACFHKNLKDEMKVAQLAAYVADKSAYHHGEVSLADTIVKLANDYMGSNNINLLEPC 737

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            GQFGTR  GGKDA+  RYIFT+L+   R +F   DD +L+YL++DG+ IEP +YMP +P 
Sbjct: 738  GQFGTRLMGGKDASQTRYIFTKLTKDARKIFDPRDDPVLNYLDDDGRAIEPDFYMPTLPM 797

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            VLVNG+EGIGTG+S Y+P +NP+DI  N++R L G   + M PW+RGF G +     KE 
Sbjct: 798  VLVNGTEGIGTGFSCYVPPFNPKDIKENIQRSLEGHDFKEMKPWFRGFKGKV----FKED 853

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVD 974
            G T+   G+  +   + L++ ELP  RWTQDY+E+L++++++    I GF   S    VD
Sbjct: 854  G-TWITEGVWRDTG-SRLKVTELPPGRWTQDYKEYLDTLVEKK--VISGFTNNSTTEDVD 909

Query: 975  FEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRL 1034
            FE+       M    + +LK  K+  +  TSNMHLF     I KY +PE+IL++F  +RL
Sbjct: 910  FEI-------MGYTGKDVLKDLKMRKSFHTSNMHLFHPTKGIYKYSSPEEILKDFVDLRL 962

Query: 1035 EFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPK 1094
            + Y+KRK+  ++ L+ +      K +F+  V+ G+IVV  RK+ DL  +L Q     FP+
Sbjct: 963  DHYKKRKEHLIKVLQTKATMAGYKSKFVTMVIEGDIVVFKRKKDDLERQLAQ----IFPQ 1018

Query: 1095 NSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKL 1154
                      G T                    YDYLL++     T E V+ LL +  + 
Sbjct: 1019 ---------IGGT--------------------YDYLLNIKTVQYTEECVRELLREAKQA 1049

Query: 1155 NEEVDDLRKATPESLWVKDL 1174
             EE++ ++  +   +W  D+
Sbjct: 1050 REELEVMKGTSHIDMWKMDI 1069


>gi|393909866|gb|EJD75625.1| DNA topoisomerase 2 [Loa loa]
          Length = 1185

 Score =  895 bits (2314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/1213 (42%), Positives = 740/1213 (61%), Gaps = 103/1213 (8%)

Query: 14   NANVVGPTAPNK--TIEEM----YQKKSQLEHILLRPDTYIG-SIEKHTQALWIYEEESK 66
            N+N V P  P +  TI +M    YQ+ + L+HIL RPD+YIG +     Q++++Y+   K
Sbjct: 46   NSNSV-PHEPEEQTTIAKMAVKTYQRLTPLKHILYRPDSYIGPAFLSDEQSIYVYDAMMK 104

Query: 67   TMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE 126
             ++ +    VPGL KIFDEILVNAADNK+RDP+M  + V ID+E + IS+ N+G G+PVE
Sbjct: 105  RILRKEARIVPGLLKIFDEILVNAADNKRRDPQMTIIAVSIDREKNTISIWNNGRGIPVE 164

Query: 127  IHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLK 186
            IH  EGVYVP +IFG L TSSNYDD+  K  GGRNG+GAKL NIFSTEF +ET   +   
Sbjct: 165  IHPTEGVYVPTMIFGTLFTSSNYDDSELKIVGGRNGFGAKLCNIFSTEFCVETCTKQSGL 224

Query: 187  KYKQVFTNNMGKKSEPNISKC-KEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDL 245
            ++ Q +  NM    +P IS       ++T V+FKPDL+KF ++ L++D + +M +R VD+
Sbjct: 225  RFFQCWRKNMNDVDDPIISNVDTNASDYTCVTFKPDLSKFKLSTLDEDTIEVMIRRTVDI 284

Query: 246  AGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHER--------VNERWEICVTLSE 297
            AG L   V V LNG ++ V  F +YV ++  + +   E         VN RW+I V  S 
Sbjct: 285  AGTL-DGVHVFLNGTKIEVSGFEDYVKLFSTNTSENFENFTVPSYCNVNNRWQIAVARSN 343

Query: 298  GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN-VKAHNVKNHLWVFVN 356
              +   SFVN I T+KGG HVDY+ NQ+ + +   + ++      +  H VKN L +FVN
Sbjct: 344  DGYNHTSFVNNINTLKGGRHVDYIMNQLVSRLKQEIRQRCDCEKLISTHQVKNRLHIFVN 403

Query: 357  ALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK 416
            +LI+NPAF+SQ+KE LT     FGS C + E F +     S I+  LL   + + +  L 
Sbjct: 404  SLIENPAFESQSKEYLTTSVKDFGSTCIIPESFYENFFKDSDIIHYLLCDISEQHTASLN 463

Query: 417  KNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFP 476
            ++      D   +SKLEDA  AG +N   CTLI+TEGDSAKALA+AGL+V+GR ++GVFP
Sbjct: 464  RSIKRPLWD---LSKLEDAVDAGTKNGYNCTLIVTEGDSAKALAVAGLAVIGRKQYGVFP 520

Query: 477  LRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLL 533
            +RGKL NVR   +   + NSEI  + +ILGLK G  Y N   +KSLRYG L+IMTDQ   
Sbjct: 521  VRGKLTNVRGMDAKMAVKNSEISALIRILGLKFGENYGNAEDLKSLRYGRLLIMTDQ--- 577

Query: 534  APLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITP 593
                                     D DGSHIKGL+IN +H +WPSLLK  +++  FITP
Sbjct: 578  -------------------------DPDGSHIKGLIINLLHMYWPSLLK-ANYINYFITP 611

Query: 594  IVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLH 653
            ++KA  +  +V SFYS  DYE W+     +++ +SIKYYKGLGTS++KE +EYF +I  H
Sbjct: 612  LLKA-KRGSEVKSFYSTADYERWQAE-NPDSAKYSIKYYKGLGTSSAKEAREYFTDIERH 669

Query: 654  KKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ----FEPGNHLDQKEKYIKYSDFVNKE 709
              +F+++     E+I+LAF+K K + RK W+ +         + +QK     +S+FVNKE
Sbjct: 670  TVNFIYDGKAADESIDLAFAKNKADDRKIWIAESSKLLLSSTNCNQK----TFSEFVNKE 725

Query: 710  LILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQ 769
            L+ +S  DL+RS+P++VDG KP QRK+LF  F R    E +V+Q +G VS++  YHHGE+
Sbjct: 726  LLEYSQLDLRRSLPNIVDGYKPSQRKVLFTMFGRYERDEVRVSQLAGAVSQYCGYHHGEE 785

Query: 770  SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
            SL +TI+ +AQDFVGSNN+NLL P GQFGTR  GG+DAASARYI+T LSP+ R +FP+ D
Sbjct: 786  SLVNTIIRLAQDFVGSNNLNLLLPLGQFGTRLAGGEDAASARYIYTSLSPLARIIFPRAD 845

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
            DK+L YL E+   IEP WY PIIP +L+NG+EGIGTGW++ I    PR I++N +RL++G
Sbjct: 846  DKVLKYLMEENTFIEPEWYCPIIPMILINGAEGIGTGWATKILPRCPRQIISNAQRLIDG 905

Query: 890  EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVN-ETTLR--IKELPIRRWTQDY 946
              ++ M P +R F GTI +   ++    Y+++G I      + LR  I ELP   W   Y
Sbjct: 906  RPLQDMLPHFRKFQGTINEITPRQ----YSISGKISYHRLRSGLRAIITELPTGIWNNKY 961

Query: 947  RE-FLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQE--GLLKKFKLTTTIS 1003
            +E  L+SI+      I  + +   ++ V F + + ++ ++  K++   L +  KL +  S
Sbjct: 962  KEKVLDSIM--KSGLISSYEELHSESNVHFILHVIDKPLISDKKQIKTLNRLLKLRSVAS 1019

Query: 1004 TSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFIL 1063
             ++M LFD K V++KY++   I +EFF +R + Y +R++ +L+ ++ +L  + N+VRF+ 
Sbjct: 1020 ENSMILFDEKNVLRKYNSTVDIFQEFFEVRRQKYVERREYELKAMDKKLKFIGNQVRFVN 1079

Query: 1064 GVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGV 1123
             V+NGEI++  + R +++ ++ +KGF   P   K          +  +E+  +P      
Sbjct: 1080 AVINGEIIIEKKNRVEIVTQIIEKGFDSNPMKMK----------NTVDENRNSP------ 1123

Query: 1124 QSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
               D+ YLL M +  L+ E++  L   R +L E    L+  T +SLW  DL+ L M LD+
Sbjct: 1124 ---DFAYLLDMPLCRLSNEEILILQEKRSELWERFKALKSTTWKSLWSMDLNLLSMALDK 1180

Query: 1184 LDKSDARAEEERM 1196
                    EE RM
Sbjct: 1181 --------EERRM 1185


>gi|448929348|gb|AGE52916.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CZ-2]
          Length = 1059

 Score =  895 bits (2312), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/1152 (45%), Positives = 710/1152 (61%), Gaps = 104/1152 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ EH+L RPDTY+G++EK  +  ++Y+    T   + + Y P   KIFDEILVN+
Sbjct: 5    YIKLSQREHVLARPDTYVGAVEKELRNDFVYDGAKIT--KKDVLYSPAFLKIFDEILVNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV I +  D ISV+N G  +P+E   +EG+Y+PE+IFGHLL+  N+D
Sbjct: 63   ADCFNRGGAMTTLKVTISK--DSISVYNDGCSIPLE-KNDEGIYIPEMIFGHLLSGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS  F +E  D     KY Q +++NM   S+  I+K  + 
Sbjct: 120  DTEERTGAGRNGYGSKLTNIFSKTFAVEIYDSSH--KYVQSWSDNMISVSKAKITKSSKV 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  SF PDLA+F M  ++DD  +++ +RV D+A  LG SV+V L+G R+ VK+  +Y
Sbjct: 178  PSIT-TSFVPDLARFGMVDIDDDTRSILVRRVYDMAAVLG-SVRVFLDGKRLDVKTPLDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
              +Y      F     + W I V     +F  VSFVN  A  +GGTHVD V N +A  V+
Sbjct: 236  FKLYTDEKVVFE--TADGWSIGVA-PANEFACVSFVNASAA-RGGTHVDAVVNSIAKAVV 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
               +KK     VK   VKN L+VFVNA + NP F SQTK+ LT R   F      S  FL
Sbjct: 292  EAASKKK--TIVKPAMVKNKLFVFVNAKVVNPTFSSQTKDILTSRNIKFSP----SATFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK T  S +++ +++  N ++S    + LKK DG K   + G+ KL DA  AG +NS  C
Sbjct: 346  KKAT--SLVLDAVIAETNVRESLVDARLLKKTDGVKKTRLTGVKKLTDAAWAGTKNSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + +  N+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSIAANAEIAAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LQVGKTYKDASSLRYGSVMLMTDA----------------------------DVDGSHIS 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
             L++NF H+ +PSLL +P FL +F TPIV A+ +   +  FYS+PDYE+WK++   + + 
Sbjct: 496  ALVMNFFHAQFPSLLAVPGFLKKFSTPIVVAS-RGKDINEFYSLPDYESWKKNTA-DCAK 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            WSIKY+KGLGTSTS++ K+YF+N+    K F W +D  GE I+ +F+K + + RK WLL 
Sbjct: 554  WSIKYFKGLGTSTSEDAKKYFKNLKSLVKIFGWTEDS-GELIDRSFNKSRPDERKTWLLN 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQ +  I   DF++KELILFS  D++RSIPS+VDGLKP QRKILF +FKRN  
Sbjct: 613  FQPGNQLDQSKTNIPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAFKRNLT 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN-GQFGTRNQGGK 805
             E KVAQFSGYV+EHS YHHGEQSL   I+GMAQD+VGSNN   L    GQFG+R  GGK
Sbjct: 673  NEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNNMNLLLPNGQFGSRILGGK 732

Query: 806  DAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGT 865
            D+ASARYIFT+LSP+TR +F + DD LL YL +DG  IEP WY+P IP +LVNG+ GIGT
Sbjct: 733  DSASARYIFTKLSPVTRQVFNQTDDVLLKYLEDDGSSIEPEWYVPAIPFLLVNGANGIGT 792

Query: 866  GWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIE 925
            G+S+ IP+YNP+DI+ NV+RL+ G+ M PM PWY+GF G I++    E G T+T  G + 
Sbjct: 793  GFSTDIPSYNPKDIIDNVKRLIAGKEMVPMTPWYKGFTGIIDQN---ENG-TFTCKG-VA 847

Query: 926  EVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMM 985
             VN  T+ + ELPI  WT DY++FLE ++++    I  FR+   +  V FE+  S E   
Sbjct: 848  NVNGKTVVVSELPIGTWTSDYKDFLEGLVEKK--VIVDFREKHTEKNVLFEIDYSGEPD- 904

Query: 986  RTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQL 1045
                   L   KL   I T+NMH FD +G IKKY  P  I+ ++F +R EFY KRK   L
Sbjct: 905  -------LSILKLEKVIRTTNMHAFDPQGKIKKYADPLDIIRDWFEVRREFYTKRKNYLL 957

Query: 1046 ENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAG 1105
            ++L  +    ENK RFI  +VN E+V++ +  + +L ELR   F                
Sbjct: 958  KDLSHKAAIAENKHRFITLIVNDELVLSKKTESVILSELRTLKFY--------------- 1002

Query: 1106 ATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKAT 1165
               ++E S              Y YLL M I +L+ E+ + L  + +KL +E+  L   +
Sbjct: 1003 ---KSEGS--------------YKYLLDMTISSLSTERAEKLRIEAEKLKKELSILENTS 1045

Query: 1166 PESLWVKDLDAL 1177
             + +W  DL+ +
Sbjct: 1046 QKQMWNTDLNNI 1057


>gi|312599337|gb|ADQ91360.1| hypothetical protein BpV2_193c [Bathycoccus sp. RCC1105 virus BpV2]
          Length = 1073

 Score =  894 bits (2311), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/1156 (42%), Positives = 703/1156 (60%), Gaps = 100/1156 (8%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E  QK + +EHIL RPD+Y+G + +  +  WIYE  S     +T+ Y P L KIFDEILV
Sbjct: 3    ESIQKLTHVEHILKRPDSYVGPVSRVAEPYWIYENGS--FEKKTVMYSPALLKIFDEILV 60

Query: 89   NAADNKQRDPK-MDAVKVVIDQEHDLISVHNSG--DGVPVEIHQEEGVYVPELIFGHLLT 145
            NA D     PK + ++ V ID+    I++ N+G   G+ V++H++EG++ PEL FGHLLT
Sbjct: 61   NAIDRNSMYPKNVTSMSVSIDKTSGQITIENNGPLGGIAVKMHEKEGLWNPELTFGHLLT 120

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            S+NYDD  K+  GGRNGYGAKLTN++S+ F I+  DG+    Y Q +++NM     P I 
Sbjct: 121  STNYDDTQKRLVGGRNGYGAKLTNVYSSMFSIKIKDGENKCIYTQEWSDNMRTCGTPKIK 180

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K     +   ++F PD  +F M+ ++D +  + +KRV D   C  ++ KV+  G  +P  
Sbjct: 181  KYSNATSSVSITFVPDWKRFGMSKMDDSIYKIFEKRVYDANICTSQNCKVKFQGDALPKA 240

Query: 266  SFAEYVDMYPKS--VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
            +F  Y  MY KS  +  F    ++RW +C+  S+  F+ VSFVNGI T KGG+HVD+V+ 
Sbjct: 241  TFNTYAKMYTKSDEICTF---TSDRWSVCIAPSDDGFEHVSFVNGICTTKGGSHVDHVSG 297

Query: 324  QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
             +AN ++  + KK K   ++   VKN  +VFV A + NP+F SQ K   TL+   FGSK 
Sbjct: 298  ILANGIIEDMAKKIK---LRPQQVKNAFFVFVKATLVNPSFSSQVKSECTLKPQDFGSKF 354

Query: 384  ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            E  + F+K +  K+GI   L++ + F++ K+LKK DG++   + GI KL+DAN AG  +S
Sbjct: 355  EPPKTFIKNI-LKTGIQSELMALSKFREMKELKKTDGSRKSKITGIPKLDDANKAGTTHS 413

Query: 444  EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
             +CTLI+TEGDSAK LA+AGLSVVGRD +GVFPLRGK  NVR+AS  Q+  N E  ++KK
Sbjct: 414  GKCTLIVTEGDSAKTLAIAGLSVVGRDHYGVFPLRGKCKNVRDASVKQLTENKEFNDLKK 473

Query: 504  ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
            ILGL+QG  Y ++  LRYG LMIMTD                             D+DGS
Sbjct: 474  ILGLQQGKVYTSLSELRYGRLMIMTDA----------------------------DNDGS 505

Query: 564  HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
            HIKGL++N IH FWPSLLK+ +F+V  +TPI+KAT K  +  SFY+   +  W    G  
Sbjct: 506  HIKGLILNMIHYFWPSLLKL-NFVVSMVTPIIKAT-KGSETKSFYTDSTFRQW---YGTG 560

Query: 624  ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
             + W IKYYKGLGTSTS E +EYF+ I      F  +D  D E+I LAF K K + RK W
Sbjct: 561  KAGWKIKYYKGLGTSTSVEAREYFKKIKDLTVQFDTDDSMD-ESIILAFDKTKSDLRKTW 619

Query: 684  LLQFEPGNHLDQKEKY-----IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 738
            LL+       + +  Y     +  SDF++K+L+ FS+ADL+RSI  + DGLKP QRK+L+
Sbjct: 620  LLESTEKKASELEVPYGNVERLGISDFIHKDLVNFSLADLKRSIAHVSDGLKPSQRKVLY 679

Query: 739  CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFG 798
              F +N   E KVAQ + YVSE ++YHHGE SLA TI+ +A +F GSNNINLL+P GQFG
Sbjct: 680  ACFTKNLTSEMKVAQLAAYVSEKTSYHHGEVSLADTIVKLAHNFTGSNNINLLEPCGQFG 739

Query: 799  TRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVN 858
            TR  GGKDA+  RYIFT+L+   R LF   DD +L+YL++DG+QIEP +Y+PI+PTVLVN
Sbjct: 740  TRLMGGKDASQTRYIFTKLTKSARILFDPKDDPVLNYLDDDGKQIEPDYYVPILPTVLVN 799

Query: 859  GSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTY 918
            G+EGIGTG+SSYIP +NP DI  N+ R++NGE + PM PW+  F G   +  S E G+ +
Sbjct: 800  GTEGIGTGFSSYIPPFNPSDIKHNIERIINGENVIPMKPWFDKFTG---RVFSNEDGL-W 855

Query: 919  TVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVF 978
               G+ +   ++ + + ELP  RWTQDY+E+L+++I++     +    Y +++T D +V 
Sbjct: 856  ITEGVWKSSGKSVI-VTELPPGRWTQDYKEYLDTLIEK-----KKITNYVNNSTTD-DVN 908

Query: 979  LSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYE 1038
             S E         ++K FKL  T   SNMHLF     I KY++PE+IL +F  IR E Y+
Sbjct: 909  FSIEGYT---GNDIIKDFKLQKTFHVSNMHLFHPTKGIHKYESPEEILTDFVKIRSETYK 965

Query: 1039 KRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKS 1098
            KRK   +  L+ +  KLEN  +FI  V++ +++V  RKR +L  E+              
Sbjct: 966  KRKTHLICVLKEKTKKLENMSKFIDMVIHEKLIVFRRKRVELEREM-------------- 1011

Query: 1099 IEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEV 1158
                           E+  + ++G     Y+YLL++     T E +Q +  +  K   E+
Sbjct: 1012 ---------------EKIFDKIDG----SYEYLLNIKTYQYTDEAIQSIREETSKSRIEL 1052

Query: 1159 DDLRKATPESLWVKDL 1174
            D L++ +   +W +DL
Sbjct: 1053 DTLQQMSHIDMWKRDL 1068


>gi|260666081|ref|YP_003213035.1| DNA topoisomerase II [Ostreococcus tauri virus 1]
 gi|260161099|emb|CAY39800.1| DNA topoisomerase II [Ostreococcus tauri virus 1]
          Length = 1072

 Score =  894 bits (2309), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/1160 (42%), Positives = 694/1160 (59%), Gaps = 107/1160 (9%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E  QK + +EH+L RPD+Y+G +E   +  WI+++       ++++Y P L KIFDEILV
Sbjct: 3    ESVQKLTHIEHVLKRPDSYVGPVEIGCEPYWIFQKTDNQFKKKSLNYSPALLKIFDEILV 62

Query: 89   NAADNKQRDPK-MDAVKVVIDQEHDLISVHNSG--DGVPVEIHQEEGVYVPELIFGHLLT 145
            NA D     PK    +   ID+E   +++ N+G   GV V +H++EG++ PEL FGHLLT
Sbjct: 63   NAIDRNSLHPKSCTLISAGIDKETGAVTIENNGPLGGVGVRMHEKEGIWNPELTFGHLLT 122

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            S+NYDDN K+  GGRNGYGAKLTNI+S+EF I   DG+  + Y Q + NNM     P I+
Sbjct: 123  STNYDDNKKRIVGGRNGYGAKLTNIYSSEFSIVIKDGETKQCYTQKWNNNMTVCHPPKIT 182

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K     +   ++F PD  +F M  +++++  + +KRV D   C   + KV+  G  +P  
Sbjct: 183  KHSASTSSVSITFIPDWKRFGMNKMDNNIYKIFEKRVWDANICTTPNCKVKFQGEALPKT 242

Query: 266  SFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQV 325
            SF  Y  M+ + V+       +RW +C+  SE   +QVSFVNGI T KGGTHVD+VA+ +
Sbjct: 243  SFEAYAKMH-EGVSEVSSVTTDRWSVCIGPSENGLEQVSFVNGICTTKGGTHVDHVASYI 301

Query: 326  ANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL 385
            A+    ++++  K   +K   VKN   +FV A ++NP F SQ K   T +   FGSK E 
Sbjct: 302  AS---GIIDEMAKKIKLKPQQVKNTFNIFVKATLENPTFSSQVKSECTSKAQDFGSKFEP 358

Query: 386  SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQ 445
             + F+K    K+GI E L + + FK+ K+LKK DG +   + GI KL+DAN AG   S +
Sbjct: 359  PKNFVKNA-LKTGIQEELTALSKFKEMKELKKTDGARKSKITGIPKLDDANKAGTAQSGK 417

Query: 446  CTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKIL 505
            CTLI+TEGDSAK LA+AGLSVVGRD +GVFPLRGK  NVR+AS  Q+ +N E  ++KKIL
Sbjct: 418  CTLIVTEGDSAKTLAVAGLSVVGRDHYGVFPLRGKCKNVRDASVAQLTSNQEFNDLKKIL 477

Query: 506  GLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
            GL+QG +Y +V  LRYG LMIMTD                             D+DGSHI
Sbjct: 478  GLQQGKDYQDVSELRYGRLMIMTDA----------------------------DNDGSHI 509

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNAS 625
            KGL++N IH FWPSLLK+  F+V  +TPI+KA+ K  +  SFY+   + +W    G    
Sbjct: 510  KGLILNMIHYFWPSLLKL-GFVVSMVTPIIKAS-KGTQSKSFYTDSAFRSW---YGNGQP 564

Query: 626  SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD---GEAIELAFSKKKIEARKK 682
             W IKYYKGLGTSTS E +EYF+ I    +D   + D D    ++I LAF KKK + RK 
Sbjct: 565  GWKIKYYKGLGTSTSAEAREYFKKI----QDLTVKFDMDIMTDKSIVLAFDKKKADDRKT 620

Query: 683  WLLQFEPGNHLDQKEKYIKY--------SDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            WLL+       D KE  + Y        + FV K+L+ FS+ADL+RSI  M DGLKP QR
Sbjct: 621  WLLE---STAKDPKELEVPYGSVKNLSITHFVRKDLVNFSLADLKRSIAHMADGLKPSQR 677

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+++  F +N   E KVAQ + YV++ SAYHHGE SLA TI+ +A D++GSNNINLL+P 
Sbjct: 678  KVMYACFHKNLKDEMKVAQLAAYVADKSAYHHGEVSLADTIVKLANDYMGSNNINLLEPC 737

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            GQFGTR  GGKDA+  RYIFT+L+   R +F   DD +L+YL++DG+ IEP +YMP +P 
Sbjct: 738  GQFGTRLMGGKDASQTRYIFTKLTKDARKIFDPRDDPVLNYLDDDGRAIEPDFYMPTLPM 797

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            VLVNG+EGIGTG+S Y+P +NP+DI  N++R L G   + M PW+RGF G +     KE 
Sbjct: 798  VLVNGTEGIGTGFSCYVPPFNPKDIKENIQRSLEGHDFKEMKPWFRGFKGKV----FKED 853

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVD 974
            G T+   G+  +   + L++ ELP  RWTQDY+E+L++++++    I GF   S    VD
Sbjct: 854  G-TWITEGVWRDTG-SRLKVTELPPGRWTQDYKEYLDTLMEKK--VISGFTNNSTTEDVD 909

Query: 975  FEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRL 1034
            FE+       M    + +LK  K+  +  TSNMHLF     I KY +PE+IL++F  +RL
Sbjct: 910  FEI-------MGYTGKDVLKDLKMRKSFHTSNMHLFHPTKGIYKYSSPEEILKDFVDLRL 962

Query: 1035 EFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPK 1094
            + Y+KRK+  ++ L+ +      K +F+  V+ G+IVV  RK+ DL  +L Q     FP+
Sbjct: 963  DHYKKRKEHLIKVLQTKATMAGYKSKFVTMVIEGDIVVFKRKKDDLERQLAQ----IFPQ 1018

Query: 1095 NSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKL 1154
                      G T                    YDYLL++     T E V+ LL +  + 
Sbjct: 1019 ---------IGGT--------------------YDYLLNIKTVQYTEECVRELLREAKQA 1049

Query: 1155 NEEVDDLRKATPESLWVKDL 1174
             EE++ ++  +   +W  D+
Sbjct: 1050 REELEVMKGTSHIDMWKMDI 1069


>gi|314055306|ref|YP_004063644.1| DNA topoisomerase II [Ostreococcus tauri virus 2]
 gi|313575197|emb|CBI70210.1| DNA topoisomerase II [Ostreococcus tauri virus 2]
 gi|388548581|gb|AFK65783.1| topoisomerase II [Ostreococcus lucimarinus virus OlV6]
          Length = 1072

 Score =  893 bits (2307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/1160 (42%), Positives = 693/1160 (59%), Gaps = 107/1160 (9%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E  QK + +EH+L RPD+Y+G ++  +++ WI+ +       + ++Y P L KIFDEILV
Sbjct: 3    ESIQKLTHIEHVLKRPDSYVGPVDIGSESYWIFHKTDNQFKKKNVNYSPALLKIFDEILV 62

Query: 89   NAADNKQRDPK-MDAVKVVIDQEHDLISVHNSG--DGVPVEIHQEEGVYVPELIFGHLLT 145
            NA D     PK + ++   ID+E   I++ N+G   G+ V +H++EG++ PEL FGHLLT
Sbjct: 63   NAIDRNSVHPKSVTSISAGIDKETGSITIENNGPLGGIGVRMHEKEGIWNPELTFGHLLT 122

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            S+NYDD  K+  GGRNGYGAKLTNI+S+EF I   DG+  + Y Q + NNM     P I+
Sbjct: 123  STNYDDTKKRIVGGRNGYGAKLTNIYSSEFSIVIKDGETKQCYTQKWNNNMTVCHPPKIT 182

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K     +   ++F PD  +F M  ++  +  + +KRV D   C   + KV+  G  +P  
Sbjct: 183  KHSASTSSVSITFIPDWKRFGMNKMDASIYKIFEKRVWDANICTTPNCKVKFQGEALPKT 242

Query: 266  SFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQV 325
            SF  Y  M+ + VT       +RW +C+  S+   +QVSFVNGI+T KGGTHVD+VA+ +
Sbjct: 243  SFEAYAKMH-EGVTDVCSVTTDRWSVCIGPSDNGLEQVSFVNGISTTKGGTHVDHVASYL 301

Query: 326  ANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL 385
            A     ++++  K   +K   VKN   +FV A ++NP F SQ K   T +   FGSK E 
Sbjct: 302  A---AGIIDEMAKKIKLKPQQVKNTFNIFVKATLENPTFSSQVKSECTSKTQDFGSKFEP 358

Query: 386  SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQ 445
             + F+K    K+GI + L + + FK+ ++LKK DG +   + GI KL+DAN AG   S +
Sbjct: 359  PKNFVKNA-LKTGIQDELTALSKFKEMRELKKTDGARKSKITGIPKLDDANKAGTAQSGK 417

Query: 446  CTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKIL 505
            CTLI+TEGDSAK LA+AGLSVVGRD +GVFPLRGK  NVR+AS  Q+ +N E  ++KKIL
Sbjct: 418  CTLIVTEGDSAKTLAVAGLSVVGRDHYGVFPLRGKCKNVRDASVAQLTSNQEFNDLKKIL 477

Query: 506  GLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
            GL+QG +Y +V  LRYG LMIMTD                             D+DGSHI
Sbjct: 478  GLQQGKDYQDVSELRYGRLMIMTDA----------------------------DNDGSHI 509

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNAS 625
            KGL++N IH FWPSLLK+  F+V  +TPI+KA+ K G+  SFY+   +  W    G   +
Sbjct: 510  KGLILNMIHYFWPSLLKL-GFVVSMVTPIIKAS-KGGQSKSFYTDSAFRTW---YGSGQA 564

Query: 626  SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD---GEAIELAFSKKKIEARKK 682
             W IKYYKGLGTSTS E +EYF+ I    +D   + D D    ++I LAF KKK + RK 
Sbjct: 565  GWKIKYYKGLGTSTSAEAREYFKKI----QDLTVKFDMDIMTDKSIILAFDKKKADDRKS 620

Query: 683  WLLQFEPGNHLDQKEKYIKY--------SDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            WLL+       D KE  + Y        + FV K+L+ FS+ADL+RSI  M DGLKP QR
Sbjct: 621  WLLE---STAKDPKELEVPYGSVKNLSITHFVRKDLVNFSLADLKRSIAHMADGLKPSQR 677

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+++  F +N   E KVAQ + YV++ SAYHHGE SLA TI+ +A D+ GSNNINLL+P 
Sbjct: 678  KVMYACFHKNLKDEMKVAQLAAYVADKSAYHHGEVSLADTIVKLANDYTGSNNINLLEPC 737

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            GQFGTR  GGKDA+  RYIFT+L+   R +F   DD +L+YL++DG+ IEP +YMP IP 
Sbjct: 738  GQFGTRLMGGKDASQTRYIFTKLTKEARKIFDPRDDPILNYLDDDGRSIEPDFYMPTIPM 797

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            VLVNG+EGIGTG+S Y+P +NP+DI  N++R L G   + M PW+RGF G I     KE 
Sbjct: 798  VLVNGTEGIGTGFSCYVPPFNPKDIKENIQRALEGHSFKDMSPWFRGFKGKI----FKED 853

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVD 974
            G T+   G+  +   + L++ ELP  RWTQDY+E+L+ +I++    I GF   S    VD
Sbjct: 854  G-TWITEGVWRDTG-SRLKVTELPPGRWTQDYKEYLDILIEKK--VISGFTNNSTTEDVD 909

Query: 975  FEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRL 1034
            FE+       M    + +LK  KL  +  TSNMHLF     I KY +PE+IL++F  +RL
Sbjct: 910  FEI-------MGYTGKDILKDLKLRKSFHTSNMHLFHPVKGIYKYSSPEEILKDFVDLRL 962

Query: 1035 EFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPK 1094
            E Y++R++  ++ LE+       K +F+  V+ G+IVV  RK+ DL  E +  G   FPK
Sbjct: 963  EHYKRRREHLIKVLEVRSKMCGYKSKFVTMVIEGQIVVFKRKKDDL--ERQLAGI--FPK 1018

Query: 1095 NSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKL 1154
                                     +NG     YDYLL++     T E V+ LL +  + 
Sbjct: 1019 -------------------------INGT----YDYLLNIKTVQYTEECVRELLKESKQA 1049

Query: 1155 NEEVDDLRKATPESLWVKDL 1174
             EE++ ++  +   +W  D+
Sbjct: 1050 REELEVMKGTSHIDMWKMDI 1069


>gi|357289588|gb|AET72901.1| DNA topoisomerase IIB [Phaeocystis globosa virus 12T]
 gi|357292383|gb|AET73719.1| DNA topoisomerase IIB [Phaeocystis globosa virus 14T]
          Length = 1153

 Score =  892 bits (2305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/1186 (42%), Positives = 723/1186 (60%), Gaps = 107/1186 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQKK+  +HIL  PDTYIGS+E   +  ++++ E   ++ + I+YVP +YK+FDE +VN 
Sbjct: 12   YQKKTDKQHILDNPDTYIGSVENIDEDTYVFDSELNRIVEKHITYVPAVYKLFDEGIVNC 71

Query: 91   ADNK------------QRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
             D+             +++  +  + V I  E  +I+++N G+G+ V +H E GV++PEL
Sbjct: 72   RDHTIRMRQLIESSPGEKNHPVTNIDVTITDE-GIITLYNDGNGIDVSMHPEYGVWIPEL 130

Query: 139  IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
            IFGHL TS+NYD N KKT GG+NG+G KL  I+ST   IET D K  +KY Q F +N+  
Sbjct: 131  IFGHLRTSTNYDKNEKKTVGGKNGFGFKLVLIWSTWGKIETVDHKTGQKYIQEFHDNLTT 190

Query: 199  KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
              +P I+KCK    +T VSFKPD  +  +  ++ D  +L+ +R+ D+A    KS+KV+ N
Sbjct: 191  IDKPKITKCKTKP-YTSVSFKPDYERLKIAGIDMDFKSLLLRRIYDMAAVTDKSIKVKFN 249

Query: 259  GHRVPVKSFAEYVDMY--PKSVT-RFHERVNERWEICVTLSEGQ-FQQVSFVNGIATIKG 314
              ++ VKSF  YVD+Y   KSVT R  E+ NERWE  V ++  Q F Q+SFVNGI T KG
Sbjct: 250  SQQINVKSFINYVDLYIGDKSVTERVQEQPNERWEYAVCIAPKQEFTQISFVNGIFTSKG 309

Query: 315  GTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            G HVDY+ NQ+   + A +  K K+ +VK   ++  L VF+N  I+NPAFDSQTK+ L  
Sbjct: 310  GKHVDYITNQIIRKITAFIKTK-KHIDVKPAAIREQLMVFINCTIENPAFDSQTKDCLNT 368

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED 434
              S+FGS CE+S++F++K+ AK G++ T  S    K++K +KK DGTK +++R I KL D
Sbjct: 369  AVSNFGSSCEVSDKFIEKL-AKMGVMATACSITEVKENKAVKKTDGTKVKNIRNIPKLVD 427

Query: 435  ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
            AN AG   S +C +IL EGDSAK+  ++GL+   R+  GV+P++GK+ NVR  S++++  
Sbjct: 428  ANFAGTSKSAECVIILCEGDSAKSGIISGLTSEDRNYIGVYPMKGKMFNVRGESASKISV 487

Query: 495  NSEIGNIKKILGLKQGVEYN--NVKS-LRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N EI  IK+I+GL+ G +Y   +VK+ LRYG ++ MTDQ                     
Sbjct: 488  NKEIFEIKQIVGLEHGKKYTAEDVKTKLRYGKILFMTDQ--------------------- 526

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGL IN I S W SL++IP F+    TPI+KAT K  + + FY+  
Sbjct: 527  -------DLDGSHIKGLGINMIDSEWKSLIEIPEFIGYMNTPILKAT-KGKETVDFYNDG 578

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFV--WEDDQDGEAIE 669
             +E WK+    +AS W+IKYYKGLGTSTSKE KEYFQ     KK  V     D+  ++I+
Sbjct: 579  QFENWKKD--NDASKWNIKYYKGLGTSTSKEFKEYFQ-----KKKVVNFTSSDKCSDSID 631

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            + F+KK+   RK WL  ++   +LD  +  + Y +F+N +L  FS  D  RSIP++ DGL
Sbjct: 632  MVFNKKRAHDRKDWLSNYDRSAYLDTDKTSVTYDEFINDDLRHFSTYDNDRSIPNICDGL 691

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            K   RKI++ +FK+    E KVAQFSGYVSEHS YHHGE SL   I+G+AQ+FVGSNNIN
Sbjct: 692  KISLRKIVYSAFKKKLHSEIKVAQFSGYVSEHSGYHHGEASLNGAIVGLAQNFVGSNNIN 751

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            L QPNGQFGTR  GGKDAAS RYIFT+LS ITR +FP+ DDK+L YL +DG  +EP +Y+
Sbjct: 752  LFQPNGQFGTRLMGGKDAASERYIFTQLSKITRAIFPEIDDKVLTYLKDDGDSVEPVYYI 811

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL-NGEMMEPMHPWYRGFGGTIEK 908
            PIIP +L+NG++GIGTG+S+ I ++NP  I+  +  +L N + +  + P+Y+ F GTI  
Sbjct: 812  PIIPMILINGTKGIGTGFSTDIMSHNPIQIIQYLENMLTNQKELGTIEPYYKNFKGTI-- 869

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI-IDQNDSFIRGFRQY 967
                +    Y + G  E ++   +RI ELPI  WTQ Y+EFLE++ + ++  +I+ +   
Sbjct: 870  -IPCDKNHKYLIRGKYEMMDNNQIRIIELPIGTWTQTYKEFLETLFVSKDKCYIKDYSDM 928

Query: 968  SDDTTVDFEV---------FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKK 1018
            S +  V+F +          LSE+       EG+    KL+TT ST+NMHLF+ KG + K
Sbjct: 929  STEANVEFIIQFYPGIISKLLSEKH--EYGLEGIEHYLKLSTTQSTTNMHLFNPKGKLTK 986

Query: 1019 YDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRT 1078
            YDT   I++E++ IRLE+Y KRK   +E L  EL  L NK ++I GV+N  I        
Sbjct: 987  YDTIYSIVDEYYSIRLEYYNKRKAYLIELLTKELATLSNKTKYITGVLNDTI-------- 1038

Query: 1079 DLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGT 1138
                +LR+K                  + DE     E       + +  Y+YL+ M +  
Sbjct: 1039 ----DLRKK------------------SKDEIYSLLEGKNFDKDMDTGSYNYLIKMPMDC 1076

Query: 1139 LTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL 1184
            ++ E ++ L  + ++  +E+D++ K+  + LW+ +L  L    +E 
Sbjct: 1077 VSEENIEKLTKEHNEKQKELDEITKSKAQDLWLGELAKLKTLYNEF 1122


>gi|448927663|gb|AGE51236.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus CVG-1]
          Length = 1092

 Score =  890 bits (2299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/1166 (45%), Positives = 716/1166 (61%), Gaps = 104/1166 (8%)

Query: 14   NANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTI 73
            NA++V   +    +   Y K SQ EH+L RPDTY+GS+EK  +  ++Y+    T   + +
Sbjct: 21   NAHLVYFVSKTIDMASKYIKLSQREHVLARPDTYVGSVEKELRNEFVYDGAKIT--KKDV 78

Query: 74   SYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGV 133
             Y P   KIFDEILVN+AD   R   M  +KV I +  D IS+ N G  +P+E   +EG+
Sbjct: 79   LYSPAFLKIFDEILVNSADCFNRGGAMTTLKVAISK--DSISIFNDGCSIPLE-KNDEGI 135

Query: 134  YVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFT 193
            Y+PE+IFGHLL+  N+DD  ++T  GRNGYG+KLTNIFS  F +E  DG    KY Q ++
Sbjct: 136  YIPEMIFGHLLSGENFDDTEERTGAGRNGYGSKLTNIFSKIFSVEIYDGSH--KYVQSWS 193

Query: 194  NNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSV 253
            +NM   S+  I+K  +  + T  SF PDLA+F MT ++DD  +++ +RV D+A  LG SV
Sbjct: 194  DNMISVSKAKITKSSKAPSIT-TSFVPDLARFGMTGIDDDTRSILVRRVYDMAAVLG-SV 251

Query: 254  KVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIK 313
            +V L+G R+ VK+  +Y  +Y      F     + W I V     +F  VSFVN  A  +
Sbjct: 252  RVFLDGKRLDVKTPLDYFKLYTDEKVVFESA--DGWSIGVA-PANEFACVSFVNASAA-R 307

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            GGTHVD V N +   V+   +KK     VK   VKN L+VFVNA + NP F SQTK+ LT
Sbjct: 308  GGTHVDTVVNSITKAVVEAASKKK--TIVKPAMVKNKLFVFVNAKVVNPTFSSQTKDILT 365

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGI 429
             R   F      S  FLKK T    +++ +++  N ++S    + LKK DG K   + GI
Sbjct: 366  SRNIKFSP----SAAFLKKATGL--VLDAVIAETNVRESLVDARLLKKTDGVKKTRLTGI 419

Query: 430  SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS 489
             KL DA  AG +NS  CTLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS 
Sbjct: 420  KKLTDAAWAGTKNSGLCTLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASV 479

Query: 490  NQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
            + +  N+EI  IK+ILGL+ G  Y +  SLRYG +M+MTD                    
Sbjct: 480  SSIAANAEIAAIKQILGLQVGKTYKDASSLRYGSVMLMTDA------------------- 520

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYS 609
                     D DGSHI  L++NF H+ +PSLL +P FL +F TPIV A+ +   +  FYS
Sbjct: 521  ---------DVDGSHISALVMNFFHAQFPSLLAVPGFLKKFSTPIVVAS-RGKDIKEFYS 570

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            +PDYE+WK++   + + WSIKY+KGLGTSTS++ K+YF+N+    K F W +D  GE I+
Sbjct: 571  LPDYESWKQNTA-DCAKWSIKYFKGLGTSTSEDAKKYFKNLKSLVKIFGWTEDS-GELID 628

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
             +F+K + + RK WLL F+PGN LDQ +  I   DF++KELILFS  D++RSIPS+VDGL
Sbjct: 629  RSFNKSRPDERKTWLLDFQPGNQLDQSKTNIPVPDFIDKELILFSRYDVERSIPSVVDGL 688

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGS-NNI 788
            KP QRKILF +FKRN   E KVAQFSGYV+EHS YHHGEQSL   I+GMAQD+VGS NN+
Sbjct: 689  KPSQRKILFAAFKRNLTNEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNNM 748

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            NLL PNGQFG+R  GGKD ASARYIFT+LSP+TR +F + DD LL YL +DG  IEP WY
Sbjct: 749  NLLLPNGQFGSRILGGKDCASARYIFTKLSPVTRQVFNQSDDVLLKYLEDDGSSIEPEWY 808

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            +P IP +LVNG+ GIGTG+S+ IP+YNP+DI+ NV+RL++G+ M PM PWY+ F G+I +
Sbjct: 809  VPAIPFLLVNGANGIGTGFSTDIPSYNPKDIIDNVKRLISGKEMVPMSPWYKEFTGSIVQ 868

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYS 968
              +     T+T  G + +V+  ++ + ELPI  WT DY++FLE ++++    I  FR+  
Sbjct: 869  NDNG----TFTCKG-VAKVSGKSVVVSELPIGTWTSDYKDFLEGLVEKK--VIVDFREKH 921

Query: 969  DDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
             +  V FE+    E          L   KL   I T+NMH FD +G IKKY  P  I+ +
Sbjct: 922  TEKNVLFEIDFPGEPD--------LSILKLEKAIRTTNMHAFDPQGKIKKYADPLDIIRD 973

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKG 1088
            +F +R EFY KRK   L++L  +    ENK RFI  +VN E+V++ +  + +L ELR   
Sbjct: 974  WFEVRREFYTKRKNYLLKDLSHKAAIAENKHRFITLIVNDELVLSKKTESVILSELRTLK 1033

Query: 1089 FTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLL 1148
            F                   ++E S              Y YLL M+I +LTLE+ + L 
Sbjct: 1034 FY------------------KSEGS--------------YKYLLDMSISSLTLERAEKLS 1061

Query: 1149 ADRDKLNEEVDDLRKATPESLWVKDL 1174
             +  +L  E+  L   +   +W  DL
Sbjct: 1062 LEAKRLKNELTILENTSLVQMWNDDL 1087


>gi|388548828|gb|AFK66029.1| topoisomerase 2 [Ostreococcus lucimarinus virus OlV3]
          Length = 1072

 Score =  889 bits (2298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/1160 (42%), Positives = 692/1160 (59%), Gaps = 107/1160 (9%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E  QK + +EH+L RPD+Y+G ++  ++  W+  +       + I+Y P L KIFDEILV
Sbjct: 3    ESIQKLTHIEHVLKRPDSYVGPVDVSSEPYWLLHKTDNQFKKKNINYSPALLKIFDEILV 62

Query: 89   NAADNKQRDPK-MDAVKVVIDQEHDLISVHNSG--DGVPVEIHQEEGVYVPELIFGHLLT 145
            NA D     PK + ++ V ID+E   I++ N+G   G+ V +H++EG++ PEL FGHLLT
Sbjct: 63   NAIDRNSVHPKSVTSISVGIDKETGSITIENNGPLGGIGVRMHEKEGIWNPELTFGHLLT 122

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            S+NYDD  K+  GGRNGYGAKLTNI+S+EF I   DG+  + Y Q + NNM     P I+
Sbjct: 123  STNYDDTKKRIVGGRNGYGAKLTNIYSSEFSIVIKDGETKQCYTQKWNNNMTVCHPPKIT 182

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K     +   ++F PD  +F M  ++  +  + +KRV D   C   + KV+  G  +P  
Sbjct: 183  KHSASTSSVSITFIPDWKRFGMNKMDASIYKIFEKRVWDANICTTPNCKVKFQGEALPKT 242

Query: 266  SFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQV 325
            SF  Y  M+ + VT       +RW +C+  S+   +QVSFVNGI+T KGGTHVD+VA+ +
Sbjct: 243  SFEAYAKMH-EGVTDICSVTTDRWSVCIGPSDNGLEQVSFVNGISTTKGGTHVDHVASYL 301

Query: 326  ANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL 385
            A     ++++  K   +K   VKN   +FV A ++NP F SQ K   T +   FGSK + 
Sbjct: 302  A---AGIIDEMAKKIKLKPQQVKNTFNIFVKATLENPTFSSQVKSECTSKAQDFGSKFDP 358

Query: 386  SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQ 445
             + F+K    K+GI   L + + FK+ ++LKK DG +   + GI KL+DAN AG   S +
Sbjct: 359  PKNFVKNA-LKTGIQGELTALSKFKEMRELKKTDGARKSKITGIPKLDDANKAGTAQSGK 417

Query: 446  CTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKIL 505
            CTLI+TEGDSAK LA+AGLSVVGRD +GVFPLRGK  NVR+AS  Q+ +N E  ++KKIL
Sbjct: 418  CTLIVTEGDSAKTLAVAGLSVVGRDHYGVFPLRGKCKNVRDASVAQLTSNQEFNDLKKIL 477

Query: 506  GLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
            GL+QG +Y +V  LRYG LMIMTD                             D+DGSHI
Sbjct: 478  GLQQGKDYQDVSELRYGRLMIMTDA----------------------------DNDGSHI 509

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNAS 625
            KGL++N IH FWPSLLK+  F+V  +TPI+KA+ K G+  SFY+   +  W    G   +
Sbjct: 510  KGLILNMIHYFWPSLLKL-GFVVSMVTPIIKAS-KGGQSKSFYTDSAFRTW---YGSGQA 564

Query: 626  SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD---GEAIELAFSKKKIEARKK 682
             W IKYYKGLGTSTS E +EYF+ I    +D   + D D    ++I LAF KKK + RK 
Sbjct: 565  GWKIKYYKGLGTSTSAEAREYFKKI----QDLTVKFDMDIMTDKSIVLAFDKKKADDRKS 620

Query: 683  WLLQFEPGNHLDQKEKYIKY--------SDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            WLL+       D KE  + Y        + FV K+L+ FS+ADL+RSI  M DGLKP QR
Sbjct: 621  WLLE---STAKDPKELEVPYGSVKNLSITHFVRKDLVNFSLADLKRSIAHMADGLKPSQR 677

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+++  F +N   E KVAQ + YV++ SAYHHGE SLA TI+ +A D+ GSNNINLL+P 
Sbjct: 678  KVMYACFHKNLKDEMKVAQLAAYVADKSAYHHGEVSLADTIVKLANDYTGSNNINLLEPC 737

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            GQFGTR  GGKDA+  RYIFT+L+   R +F   DD +L+YL++DG+ IEP +YMP +P 
Sbjct: 738  GQFGTRLMGGKDASQTRYIFTKLTKEARKIFDPRDDPILNYLDDDGRSIEPDFYMPTLPM 797

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            VLVNG+EGIGTG+S Y+P +NP+DI  N++R L G   + M PW+RGF G +     KE 
Sbjct: 798  VLVNGTEGIGTGFSCYVPPFNPKDIKENIQRALEGHSFKDMSPWFRGFKGKV----FKED 853

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVD 974
            G T+   G+  +   + L++ ELP  RWTQDY+E+L++++++    I GF   S    VD
Sbjct: 854  G-TWITEGVWRDTG-SRLKVTELPPGRWTQDYKEYLDALVEKK--VISGFTNNSTTEDVD 909

Query: 975  FEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRL 1034
            FE+       M    + +LK  KL  +  TSNMHLF     I KY +PE+IL++F  +RL
Sbjct: 910  FEI-------MGYTGKDILKDLKLRKSFHTSNMHLFHPVKGIYKYSSPEEILKDFVDLRL 962

Query: 1035 EFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPK 1094
            E Y++R++  ++ LE+       K +F+  V+ G+IVV  RK+ DL  E +  G   FPK
Sbjct: 963  EHYKRRREHLIKVLEVRSKMCGYKSKFVTMVIEGQIVVFKRKKDDL--ERQLAGI--FPK 1018

Query: 1095 NSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKL 1154
                                     +NG     YDYLL++     T E V+ LL +  + 
Sbjct: 1019 -------------------------INGT----YDYLLNIKTVQYTEECVRELLKESKQA 1049

Query: 1155 NEEVDDLRKATPESLWVKDL 1174
             EE++ ++  +   +W  D+
Sbjct: 1050 REELEVMKGTSHIDMWKMDI 1069


>gi|313768187|ref|YP_004061618.1| hypothetical protein BpV1_188c [Bathycoccus sp. RCC1105 virus BpV1]
 gi|312599794|gb|ADQ91815.1| hypothetical protein BpV1_188c [Bathycoccus sp. RCC1105 virus BpV1]
          Length = 1073

 Score =  888 bits (2295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/1161 (42%), Positives = 698/1161 (60%), Gaps = 106/1161 (9%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEI 86
            + E  QK + +EHIL RPD+Y+G + +  +  WIYE +      +T+ Y P L KIFDEI
Sbjct: 1    MSESIQKLTHVEHILKRPDSYVGPVSRVAEPYWIYENDQ--FEKKTVVYSPALLKIFDEI 58

Query: 87   LVNAADNKQRDPK-MDAVKVVIDQEHDLISVHNSG--DGVPVEIHQEEGVYVPELIFGHL 143
            LVNA D     PK + ++ V ID+    I++ N+G   G+ V++H++EG++ PEL FGHL
Sbjct: 59   LVNAIDRNSMYPKNVTSMSVSIDKISGEITIENNGPLGGIAVKMHEKEGLWNPELTFGHL 118

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LTS+NYDD  K+  GGRNGYGAKLTN++S++F ++  DG+    Y Q +++NM     P 
Sbjct: 119  LTSTNYDDTQKRVVGGRNGYGAKLTNVYSSKFSVKIKDGENKCIYTQEWSDNMKTCGTPK 178

Query: 204  ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            I K     +   ++F PD  +F M+ ++D +  + +KRV D   C  ++ KV+  G  +P
Sbjct: 179  IKKYSNATSSVSITFVPDWKRFGMSKMDDSIYKIFEKRVYDANICTSQNCKVKFQGDALP 238

Query: 264  VKSFAEYVDMYPKS--VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
              +F  Y  MY KS  +  F    ++RW +C+  S+  F+ VSFVNGI T KGG+HVD+V
Sbjct: 239  KATFNTYAKMYTKSDEICTF---TSDRWSVCIAPSDDGFEHVSFVNGICTTKGGSHVDHV 295

Query: 322  ANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS 381
            +  +AN V+  + KK K   ++   VKN  +VFV A + NP+F SQ K   TL+   FGS
Sbjct: 296  SGILANGVIEDMAKKIK---LRPQQVKNAFFVFVKATLVNPSFSSQVKSECTLKPQDFGS 352

Query: 382  KCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGR 441
            K E  + F+K +  K+ +   L + + F++ K+LKK DG++   + GI KL+DAN AG  
Sbjct: 353  KFEPPKTFIKNI-LKTSVQSELTALSKFREMKELKKTDGSRKSKITGIPKLDDANKAGTT 411

Query: 442  NSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNI 501
            +S +CTLI+TEGDSAK LA+AGLSVVGRD +GVFPLRGK  NVR+AS  Q+  N E  ++
Sbjct: 412  HSGKCTLIITEGDSAKTLAIAGLSVVGRDHYGVFPLRGKCKNVRDASVKQLTENKEFNDL 471

Query: 502  KKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHD 561
            KKILGL+QG  Y ++  LRYG LMIMTD                             D+D
Sbjct: 472  KKILGLQQGKVYTSLSELRYGRLMIMTDA----------------------------DND 503

Query: 562  GSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLG 621
            GSHIKGL++N IH FWPSLLK+  F+V  +TPI+KA+ K  +  SFY+   +  W    G
Sbjct: 504  GSHIKGLILNMIHYFWPSLLKL-KFVVSMVTPIIKAS-KGSETKSFYTDSTFRHW---YG 558

Query: 622  GNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG---EAIELAFSKKKIE 678
               + W IKYYKGLGTSTS E +EYF+ I    KD   + D D    E+I LAF K K +
Sbjct: 559  NGKAGWKIKYYKGLGTSTSAEAREYFKKI----KDLTVQFDTDNSMDESIVLAFDKTKSD 614

Query: 679  ARKKWLLQFEPGNHLDQKEKY-----IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQ 733
             RK WLL+       + +  Y     +  SDF++K+L+ FS+ADL+RSI  + DGLKP Q
Sbjct: 615  LRKTWLLESTEKKASELEVPYGNVERLGISDFIHKDLVNFSLADLKRSIAHVSDGLKPSQ 674

Query: 734  RKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQP 793
            RK+L+  F +N   E KVAQ + YVSE ++YHHGE SLA TI+ +A +F GSNNINLL+P
Sbjct: 675  RKVLYACFTKNLTSEMKVAQLAAYVSEKTSYHHGEVSLADTIVKLAHNFTGSNNINLLEP 734

Query: 794  NGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIP 853
             GQFGTR  GGKDA+  RYIFT+L+   R LF   DD +L+YL++DG+QIEP +Y+PI+P
Sbjct: 735  CGQFGTRLMGGKDASQTRYIFTKLTKNARILFDPKDDPVLNYLDDDGKQIEPDYYVPILP 794

Query: 854  TVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKE 913
            TVLVNG+EGIGTG+SSYIP +NP DI  N+ R++ GE + PM PW+  F G   +  S E
Sbjct: 795  TVLVNGTEGIGTGFSSYIPPFNPLDIKHNIERIIRGETVVPMKPWFDKFTG---RVFSNE 851

Query: 914  AGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTV 973
             G+ +   G+ +   +  L + ELP  RWTQDY+E+L+++I++     +    Y +++T 
Sbjct: 852  DGL-WITEGVWKYSGKNVL-VTELPPGRWTQDYKEYLDTLIEK-----KKITNYVNNSTT 904

Query: 974  DFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIR 1033
            D   F+ E          ++K FKL  T   SNMHLF     I KY++PE+IL +F  IR
Sbjct: 905  DDVNFIIEGYT----GNDIIKDFKLQKTFHVSNMHLFHPTRGIHKYESPEEILTDFVKIR 960

Query: 1034 LEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP 1093
             E Y+KRK   +  L+ +  KLEN  +FI  V++ +++V  RKR +L             
Sbjct: 961  SETYKKRKAHLIRVLKEKTKKLENMSKFIDMVIHEKLIVFRRKRVEL------------- 1007

Query: 1094 KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDK 1153
                  E  +    D+ + S              Y+YLL++     TLE +Q +  +  K
Sbjct: 1008 ------ERQMENIFDKIDGS--------------YEYLLNIKTYQYTLEAIQSIREETSK 1047

Query: 1154 LNEEVDDLRKATPESLWVKDL 1174
               E D L++ +   +W +DL
Sbjct: 1048 SRIEFDTLQQMSHIDMWKRDL 1068


>gi|449017495|dbj|BAM80897.1| DNA topoisomerase II [Cyanidioschyzon merolae strain 10D]
          Length = 1200

 Score =  888 bits (2295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/1229 (40%), Positives = 709/1229 (57%), Gaps = 140/1229 (11%)

Query: 27   IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTM---IH------RTISYVP 77
            IE  YQ+ +  EH+L RP+ Y+G +E+  + LW     S T+   IH      R + Y P
Sbjct: 27   IEATYQRLTPREHVLKRPEVYLGPVERIERRLWSIPATSATVEQVIHEGRITLRQVHYSP 86

Query: 78   GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHD------LISVHNSGDGVPVEIHQEE 131
             LYKIFDEILVNA DN +RDP  DA+ + +  E         + + N+G G+PV +H  E
Sbjct: 87   ALYKIFDEILVNAIDNARRDPHTDAIDIWLPLEDSASTSKRTLRIRNTGRGIPVAMHPRE 146

Query: 132  GVYVPELIFGHLLTSSNYDDN--VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYK 189
             +YVPELIFGHLLT SN+DD     + TGGR+GYGAKLTNI S  F +ET D +R  +Y+
Sbjct: 147  HLYVPELIFGHLLTGSNFDDTDASVRLTGGRHGYGAKLTNIMSKRFAVETIDEQRCLRYR 206

Query: 190  QVFTNNMGKKSEPNI---SKCKEGDNWTKVSFKPDLAKFNMTHLED-DVVALMKKRVVDL 245
            QV+ NNM   S P I   S       +T++ F+PDL +F +    D D + LM +R  D 
Sbjct: 207  QVWQNNMSTCSAPEIEAVSPAIAQHPYTEIEFEPDLERFGLDRCGDRDTLMLMARRAFDA 266

Query: 246  AGCLGKSVKVELNGHRVPVKSFAEYV-----DMYPKSVTRFHERVNERWEI---CVTLSE 297
            AG L  +V+V LNG  + +  FAEYV     D  P  + +     N  WEI    +T +E
Sbjct: 267  AGIL-PNVRVRLNGTPLALNGFAEYVQRHGTDAEPSIILQ----PNAHWEIGLRALTQAE 321

Query: 298  GQFQQVSFVNGIATIKGGTHVDYV----ANQVANHVMAVVNKKNKNANVKAHNVKNHLWV 353
                 VSFVNGIAT +GG+HV  +      ++A+ + A    K+    +    V++ L +
Sbjct: 322  QAAPMVSFVNGIATFQGGSHVQCIQELLCRRIADRIAA--RYKSLRCVLTPSLVRSQLLL 379

Query: 354  FVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEF-----LKKVTAKSGIVETLLSWAN 408
            FVN L++ PAF+SQ+KE LT RQ    +   L E+F     L     ++ ++E +L+ A 
Sbjct: 380  FVNCLVNRPAFESQSKEMLTSRQRDLLAT--LPEQFPTENELNDALEQTKLMERILAAAE 437

Query: 409  FKQSKDLK-----------KNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAK 457
             + + +++            + GT       I KLEDAN AGG +S +CTLILTEGDSAK
Sbjct: 438  ERLAAEVRGSRPVSALVASASRGTGALRRLAIPKLEDANAAGGPDSSRCTLILTEGDSAK 497

Query: 458  ALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--- 514
            ALAMAGLSVVGRD +GVFPLRGKLLNVR+    Q+  N E+ N++ ILGL+   +Y+   
Sbjct: 498  ALAMAGLSVVGRDYYGVFPLRGKLLNVRDCHPRQLAQNEEVNNLRIILGLEFDRDYSTPE 557

Query: 515  NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIH 574
            + K+LRYGH+M+MTDQ                            DHDGSHIKGL++N   
Sbjct: 558  SRKALRYGHVMLMTDQ----------------------------DHDGSHIKGLIMNLFD 589

Query: 575  SFWPSLLKIPSFLVEFITPIVKATNKNG-KVLSFYSMPDYEAWKESLGGNA--SSWSIKY 631
             FWPSLL+   FL  F+TPIVKA  K+G  V SF+++  +  W E L  +     W IKY
Sbjct: 590  FFWPSLLEGGDFLEAFMTPIVKAAAKHGGAVQSFFTITAFREWWEQLPASQRHHHWLIKY 649

Query: 632  YKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGN 691
            YKGLGTSTS EGK YF+++  H+  F      D   ++LAF++ + E RK+WL + +   
Sbjct: 650  YKGLGTSTSAEGKAYFRDLERHRIRFAPVAPGDRHQLDLAFNRSRAEERKRWLAELDTAT 709

Query: 692  HLD----------QKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 741
              D            +  +  + FVN+EL L+S A+  RSIPS +DGLKP QRK+L+   
Sbjct: 710  PRDAGDAPLETNASSDAGVSLATFVNRELALYSYANNVRSIPSAIDGLKPAQRKVLYACL 769

Query: 742  KRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRN 801
            KR  +++ KVAQ +GYV+E +AYHHGE+SL STI+ MAQDF G+NN+ LLQP GQFGTR 
Sbjct: 770  KRGLVRDMKVAQLAGYVAEQTAYHHGEESLHSTIVRMAQDFCGANNLPLLQPLGQFGTRL 829

Query: 802  QGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSE 861
             GGKDAASARYI+T LSP+TR +FP  DD LL Y  +DGQQIEP +++PIIP  LVNG +
Sbjct: 830  LGGKDAASARYIYTCLSPVTRKIFPASDDPLLTYCEDDGQQIEPEYFVPIIPMALVNGID 889

Query: 862  GIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVT 921
            G+GTGWS+ +P ++P DI+ NVR LL G   +P+ PWYR F G I      ++ + +   
Sbjct: 890  GVGTGWSTTLPPFHPLDIIHNVRCLLQGRSPKPLKPWYRRFRGQI----IAQSELVFVSR 945

Query: 922  GIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSE 981
            G +E ++ TT R++ELPI RWT+ Y+ FL  + +     ++GFR+Y  D  + FE+ ++ 
Sbjct: 946  GCVERLSSTTFRVRELPIGRWTESYKAFLHELTEAG--VLKGFREYHTDENICFELVMTR 1003

Query: 982  ESMMRTKQ--EGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEK 1039
             +  R ++  EGL +  +L +TIS +NMHLFD++G I+KY+TP  ILE+F   R   Y+K
Sbjct: 1004 ANAQRLEERGEGLWRHLRLESTISCTNMHLFDARGRIRKYETPLSILEDFMIERERLYQK 1063

Query: 1040 RKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSI 1099
            R + + + LE +    + ++ F+  VV+G++ +  R    +  ++   G +P        
Sbjct: 1064 RLERECQELERKFASAQKRLAFVELVVSGKLELFGRSLNQVQRDMISLGISP-------- 1115

Query: 1100 EAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVD 1159
                    DE   S E               LL+  +  LT E+ Q    +        +
Sbjct: 1116 --------DEATGSLEA--------------LLATPVRLLTREEAQRTRDETRHWRARWE 1153

Query: 1160 DLRKATPESLWVKDLDALDMQLDELDKSD 1188
              R ATP S+W  +L  L+  +  +  +D
Sbjct: 1154 ASRAATPRSVWQAELAELERTVRSMLAND 1182


>gi|448935611|gb|AGE59161.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus OR0704.2.2]
          Length = 1059

 Score =  888 bits (2295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/1149 (45%), Positives = 707/1149 (61%), Gaps = 104/1149 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ EHIL R DTY+G++EK  +  ++Y+    T   + + Y P   KIFDEILVN+
Sbjct: 5    YIKLSQREHILHRADTYVGAVEKELRNDFVYDGAKIT--KKDVLYSPAFLKIFDEILVNS 62

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
            AD   R   M  +KV I +  D ISV+N G  +P+E   +EG+Y+PE+IFGHLL+  N+D
Sbjct: 63   ADCFNRGGAMTTLKVTISK--DSISVYNDGCSIPLE-KNDEGIYIPEMIFGHLLSGENFD 119

Query: 151  DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
            D  ++T  GRNGYG+KLTNIFS  F +E  D     KY Q +++NM   S+  I+K  + 
Sbjct: 120  DTEERTGAGRNGYGSKLTNIFSKTFAVEIYDSSH--KYVQSWSDNMISVSKAKITKSSKV 177

Query: 211  DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
             + T  SF PDLA+F M  ++DD  +++ +RV D+A  LG SV+V L+G R+ VK+  +Y
Sbjct: 178  PSIT-TSFVPDLARFGMVDIDDDTRSILVRRVYDMAAVLG-SVRVFLDGKRLDVKTPLDY 235

Query: 271  VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
              +Y      F     + W I V     +F  VSFVN  A  +GGTHVD V N +A  V+
Sbjct: 236  FKLYTDEKVVFE--TADGWSIGVA-PANEFACVSFVNASAA-RGGTHVDAVVNSIAKAVV 291

Query: 331  AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
               +KK     VK   VKN L+VFVNA + NP F SQTK+ LT R   F      S  FL
Sbjct: 292  EAASKKK--TIVKPAMVKNKLFVFVNAKVVNPTFSSQTKDILTSRNIKFSP----SATFL 345

Query: 391  KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
            KK T  S +++ +++  N ++S    + LKK DG K   + GI KL DA  AG +NS  C
Sbjct: 346  KKAT--SLVLDAVIAETNVRESLVDARLLKKTDGVKKTRLTGIKKLTDAAWAGTKNSGLC 403

Query: 447  TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
            TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + +  N+EI  IK+ILG
Sbjct: 404  TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSIAANAEIAAIKQILG 463

Query: 507  LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
            L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464  LQVGKTYKDASSLRYGSVMLMTDA----------------------------DVDGSHIS 495

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
             L++NF H+ +PSLL +P FL +F TPIV A+ +   +  FYS+PDYE+WK++   + + 
Sbjct: 496  ALVMNFFHAQFPSLLAVPGFLKKFSTPIVVAS-RGKDINEFYSLPDYESWKKNTA-DCAK 553

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            WSIKY+KGLGTSTS++ K+YF+N+    K F W +D  GE I+ +F+K + + RK WLL 
Sbjct: 554  WSIKYFKGLGTSTSEDAKKYFKNLKSLVKIFGWTEDS-GELIDRSFNKSRPDERKTWLLN 612

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F+PGN LDQ +  I   DF++KELILFS  D++RSIPS+VDGLKP QRKILF +FKRN  
Sbjct: 613  FQPGNQLDQSKTNIPVPDFIDKELILFSRYDVERSIPSVVDGLKPSQRKILFAAFKRNLT 672

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN-GQFGTRNQGGK 805
             E KVAQFSGYV+EHS YHHGEQSL   I+GMAQD+VGSNN   L    GQFG+R  GGK
Sbjct: 673  NEMKVAQFSGYVAEHSGYHHGEQSLQGAIVGMAQDYVGSNNNMNLLLPNGQFGSRLLGGK 732

Query: 806  DAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGT 865
            D+ASARYIFT+LSP+TR +F + DD LL YL +DG  IEP WY+P IP +LVNG+ GIGT
Sbjct: 733  DSASARYIFTKLSPVTRQVFNQTDDVLLKYLEDDGSSIEPEWYVPAIPFLLVNGANGIGT 792

Query: 866  GWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIE 925
            G+S+ IP+YNP+DI+ NV+RL+ G+ M PM PWY+GF G I++    E G T+T  G + 
Sbjct: 793  GFSTDIPSYNPKDIIDNVKRLIAGKEMVPMTPWYKGFTGIIDQN---ENG-TFTCKG-VA 847

Query: 926  EVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMM 985
             VN  T+ + ELPI  WT DY++FLE ++++    I  FR+   +  V FE+  S E   
Sbjct: 848  NVNGKTVVVSELPIGTWTSDYKDFLEGLVEKK--VIVDFREKHTEKNVLFEIDYSGEPD- 904

Query: 986  RTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQL 1045
                   L   KL   I T+NMH FD +G IKKY  P  I+ ++F +R EFY KRK   +
Sbjct: 905  -------LSILKLEKVIRTTNMHAFDPQGKIKKYADPLDIILDWFEVRREFYTKRKAYLI 957

Query: 1046 ENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAG 1105
            ++L  +    ENK RFI  +VN E+V++ +  + +L ELR   F                
Sbjct: 958  KDLSHKAAIAENKHRFITLIVNDELVLSKKTESVILSELRTLKFY--------------- 1002

Query: 1106 ATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKAT 1165
               ++E S              Y YLL M+I +L+ E+ + L  + +KL +E+  L   +
Sbjct: 1003 ---KSEGS--------------YKYLLDMSISSLSTERAEKLRIEAEKLKKELSILENTS 1045

Query: 1166 PESLWVKDL 1174
               +W  DL
Sbjct: 1046 RIQMWSDDL 1054


>gi|83317979|ref|XP_731396.1| DNA topoisomerase II [Plasmodium yoelii yoelii 17XNL]
 gi|23491424|gb|EAA22961.1| DNA topoisomerase II, putative [Plasmodium yoelii yoelii]
          Length = 1489

 Score =  887 bits (2291), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/936 (49%), Positives = 623/936 (66%), Gaps = 47/936 (5%)

Query: 274  YPKSVTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAV 332
            Y + + + HE+   RWEI ++ ++G QFQQVSFVN I T KGGTHV Y+ +Q+ N +   
Sbjct: 323  YEEEIVKIHEK-QHRWEIVISKTDGSQFQQVSFVNSICTTKGGTHVSYIVDQLLNSLSKK 381

Query: 333  VNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLK 391
             N KNK    +KA +++NHLWVFVN LI NP FDSQTKETLT +Q+ FGSKC L+++ + 
Sbjct: 382  ANAKNKGGMEIKAGHIRNHLWVFVNCLIVNPTFDSQTKETLTTKQAKFGSKCTLTDKTIN 441

Query: 392  KVTAKSGIVETLLSWANFKQSKDLKK----NDGTKTEDVRGISKLEDANLAGGRNSEQCT 447
             V  KS I+  +L WA  K   +L+K          E + GI KLEDAN AG + S++CT
Sbjct: 442  NV-LKSSILSNILLWAQAKAQVELRKKMKAGSSKARERIIGIPKLEDANDAGSKYSQECT 500

Query: 448  LILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGL 507
            LILTEGDSAK   +AGLS+VGRDR+GVFPL+GKLLNVR+AS  Q+++N EI NI KI+GL
Sbjct: 501  LILTEGDSAKTSCLAGLSIVGRDRYGVFPLKGKLLNVRDASFKQLMDNKEIQNIFKIMGL 560

Query: 508  K-QGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
                    ++K LRYG LMIMTDQ                            D+DGSHIK
Sbjct: 561  DITDKNKQDIKGLRYGSLMIMTDQ----------------------------DYDGSHIK 592

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
            GLLIN IH FWPSLLK   FL EF+TPIVK   K  + LSF+++ +YE WKE+   N   
Sbjct: 593  GLLINMIHKFWPSLLKHKGFLCEFVTPIVKV-QKGNQELSFFTIAEYEQWKENT--NLVG 649

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            W IKYYKGLGTST KE K+YF +I  HK  F+W  D+DG++I++AFSKK+IE RK WL  
Sbjct: 650  WKIKYYKGLGTSTDKEFKQYFSDIQSHKIFFLWTGDRDGDSIDMAFSKKRIEDRKLWLQN 709

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F  G+++D KEK + Y DFVNKELI +S  D +RSIP+++DG KPGQRK+L+  FKRN  
Sbjct: 710  FILGSYVDHKEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCFKRNLK 769

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQ  GY++EHSAYHHGE SL  TI+ MAQ FVGSNNIN L+P GQFG+R +GGKD
Sbjct: 770  NECKVAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGSRKEGGKD 829

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            A++ARYIFT+L+  TR +F + DD +L YLNE+GQ+IEP +Y+P+IPT+LVNG EGIGTG
Sbjct: 830  ASAARYIFTKLASSTRSIFNEYDDPILKYLNEEGQKIEPQYYIPVIPTILVNGCEGIGTG 889

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +SS+IPNYN +DI+ N+++ ++ E + PM PWY+ F G IE     ++G  Y   GII +
Sbjct: 890  YSSFIPNYNYKDIINNIKKYIDKEPLVPMVPWYKDFKGRIEPNG--KSG--YETIGIINK 945

Query: 927  VNETTLRIKELPIRRWTQDYREFLESII-DQNDSFIRGFRQYSDDTTVDFEVFLSEESMM 985
            +++ TL I ELPI+RWTQDY+EFLE ++ D+ +  I  +   S    V F + +    + 
Sbjct: 946  IDDETLEITELPIKRWTQDYKEFLEELLTDEKNQLIIDYIDNSSHEDVCFTIKMDPIKLK 1005

Query: 986  RTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQL 1045
            R ++EGL K FKL +T++T+NM LFD K  +++Y +   IL++F   RL  Y  RK   +
Sbjct: 1006 RAEEEGLEKVFKLKSTLTTTNMTLFDPKLKLQRYASELDILKDFCFHRLNAYTDRKNYLI 1065

Query: 1046 ENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP--KNSKSIEAVV 1103
              LE E   + NK +FIL ++NGE+VVN +K+  L+ EL +KG+ P+      K  E   
Sbjct: 1066 SKLEKEKRIISNKTKFILAIINGELVVNKKKKKILVEELYRKGYDPYKDIHKLKKEEIFE 1125

Query: 1104 AGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
                D  E  E+N E++ GV   DY+YLL+M I +LTLEKV+ LL+   +  +E++ L+ 
Sbjct: 1126 QELLDAAENPEDNEEIIAGVTVKDYNYLLNMPIFSLTLEKVEELLSQLKEKEQELEILKS 1185

Query: 1164 ATPESLWVKDLDALDMQLDELDKSDARAEEERMKIK 1199
             T E++W+KD++ ++  ++     +    EE  K K
Sbjct: 1186 ITVETMWLKDIEKVEEAIEFQRNVELANREESNKFK 1221



 Score =  303 bits (776), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 147/258 (56%), Positives = 189/258 (73%), Gaps = 8/258 (3%)

Query: 22  APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
           + NKTIEE YQKKSQ+EHILLRPDTYIGS+E HTQ LWI+ +E   M+ + I+YVPGLYK
Sbjct: 2   SKNKTIEERYQKKSQIEHILLRPDTYIGSVEMHTQLLWIWNKEKSRMVQKNITYVPGLYK 61

Query: 82  IFDEILVNAADNKQRDPK-----MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVP 136
           IFDEI+VNAAD K R+ +     M  +K+ I++E   ISV+N G+G+PV+IH+E  +YVP
Sbjct: 62  IFDEIIVNAADVKAREKEKSENPMTCIKIEINREQKKISVYNDGEGIPVDIHKEMNIYVP 121

Query: 137 ELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
            +IFG LLTS NYDD   + TGGRNG+GAKLTNIFS EF ++  D  R K++K  +  NM
Sbjct: 122 HMIFGELLTSDNYDDAEDRITGGRNGFGAKLTNIFSKEFTVQCGDSSRKKEFKMTWFQNM 181

Query: 197 GKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVE 256
            K S+P+I K   G ++ KV+FKPDL KF M+ L+DD+  L+ KRV DLAG    +V+V 
Sbjct: 182 SKFSDPHI-KNYNGKDYVKVTFKPDLDKFGMSELDDDIECLLHKRVYDLAGTC--NVRVY 238

Query: 257 LNGHRVPVKSFAEYVDMY 274
           LNG R+PVK F  YVD+Y
Sbjct: 239 LNGTRLPVKDFKSYVDLY 256


>gi|313844192|ref|YP_004061855.1| hypothetical protein OlV1_223c [Ostreococcus lucimarinus virus OlV1]
 gi|312599577|gb|ADQ91599.1| hypothetical protein OlV1_223c [Ostreococcus lucimarinus virus OlV1]
          Length = 1074

 Score =  884 bits (2285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/1160 (42%), Positives = 695/1160 (59%), Gaps = 105/1160 (9%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E  QK + +EH+L RPD+Y+G ++  ++  W+  +       + I+Y P L KIFDEILV
Sbjct: 3    ESIQKLTHIEHVLKRPDSYVGPVDVSSEPYWLLHKTDNQFKKKNINYSPALLKIFDEILV 62

Query: 89   NAADNKQRDPK-MDAVKVVIDQEHDLISVHNSG--DGVPVEIHQEEGVYVPELIFGHLLT 145
            NA D     PK + ++ V ID+E   +++ N+G   G+ V +H++EGV+ PEL FGHLLT
Sbjct: 63   NAIDRNSVHPKSVTSISVGIDKETGAVTIENNGPLGGIGVRMHEKEGVWNPELTFGHLLT 122

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            S+NYDD  K+  GGRNGYGAKLTNI+S+EF I   D +  + Y Q +  NM     P I+
Sbjct: 123  STNYDDTKKRIVGGRNGYGAKLTNIYSSEFSIVIKDHEAKQTYTQKWEKNMTVCHPPKIT 182

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K     +   ++F PD  +F M  ++ ++  + +KRV D   C   + KV+  G  +P  
Sbjct: 183  KHSGSTSSVSITFTPDWRRFGMKKMDANIYKIFEKRVWDANICTTPNCKVKFQGEVLPKT 242

Query: 266  SFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQV 325
            SF  Y  M+ + V        +RW +C+  SE   +QVSFVNGI+T KGGTHVD+VA+ +
Sbjct: 243  SFEAYAKMH-EGVKDVCSVTTDRWSVCIGPSENGLEQVSFVNGISTTKGGTHVDHVASLL 301

Query: 326  ANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL 385
            A+ ++  + KK K   +K   VKN   +FV A I+NP F SQ K   T +   FGSK E 
Sbjct: 302  ASGIIEEMAKKIK---LKPQQVKNTFNIFVKATIENPTFSSQVKSECTSKAQDFGSKFEP 358

Query: 386  SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQ 445
             + F+K    K+GI + L + + FK+ K+L K+DGT+   + GI KL+DAN AG   S +
Sbjct: 359  PKSFVKNA-LKTGIQDELTALSKFKEMKELSKSDGTRKSKITGIPKLDDANKAGTAQSGK 417

Query: 446  CTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKIL 505
            CTLI+TEGDSAK LA+AGLSVVGRD +GVFPLRGK  NVR+AS  Q+ +N E  ++KKIL
Sbjct: 418  CTLIVTEGDSAKTLAVAGLSVVGRDHYGVFPLRGKCKNVRDASVTQLTSNQEFNDLKKIL 477

Query: 506  GLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
            GL+QG +Y +V  LRYG LMIMTD                             D+DGSHI
Sbjct: 478  GLQQGKDYQDVSELRYGRLMIMTDA----------------------------DNDGSHI 509

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNAS 625
            KGL++N IH FWPSLLK+  F+V  +TPI+KA+ K  +  SFY+   + +W    G    
Sbjct: 510  KGLILNMIHYFWPSLLKL-GFVVSMVTPIIKAS-KGSQSKSFYTDSTFRSW---YGNGQP 564

Query: 626  SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD---GEAIELAFSKKKIEARKK 682
             W IKYYKGLGTSTS E +EYF+ I    +D   + D D     +I LAF KKK + RK 
Sbjct: 565  GWKIKYYKGLGTSTSAEAREYFKKI----QDLTVKFDMDIMSDRSIVLAFDKKKADDRKS 620

Query: 683  WLLQFEPGNHLDQKEKYIKY--------SDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            WLL+       D KE  + Y        S+FV+K+L+ FS+ADL+RSI  M DGLKP QR
Sbjct: 621  WLLE---STAKDPKELEVPYGNVRNLSISNFVHKDLVNFSLADLKRSIAHMADGLKPSQR 677

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+++  F +N   E KVAQ + +V+E SAYHHGE SLA TI+ +A D++GSNNINLL+P 
Sbjct: 678  KVMYACFHKNLKDEMKVAQLAAFVAEKSAYHHGEVSLADTIVKLANDYMGSNNINLLEPC 737

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            GQFGTR  GGKDA+  RYIFT+L+   R +F   DD +L+YL++DG+ IEP +YMP +P 
Sbjct: 738  GQFGTRLMGGKDASQTRYIFTKLTKDARKIFDPRDDPILNYLDDDGRPIEPDFYMPTLPM 797

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            VLVNG+EGIGTG+S Y+P +NP+DI  N+++ L G     M PW++GF G I K    E+
Sbjct: 798  VLVNGTEGIGTGFSCYVPPFNPKDIKDNIQKALEGHGFTQMRPWFKGFKGKIFK--EDES 855

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVD 974
            G ++   GI  +   + L+I ELP  RWTQDY+E+L++++++    I  F   S    VD
Sbjct: 856  G-SWIAEGIWHDTG-SRLKITELPPGRWTQDYKEYLDTLVEKK--VITNFTNNSTTDDVD 911

Query: 975  FEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRL 1034
            FE+       +    + L+K  KL  +  TSNMHLF     I KY++PE+IL++F  +RL
Sbjct: 912  FEI-------VGYSGKDLVKDLKLRKSFHTSNMHLFHPTKGIYKYNSPEEILKDFVDLRL 964

Query: 1035 EFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPK 1094
            + Y+KR++  ++ L+ +      K +F+  V+ G+IVV  RKR DL  +L Q     FPK
Sbjct: 965  DHYKKRREHLIKVLQTKATMCGYKSKFVTMVIEGDIVVFKRKRDDLERQLSQ----LFPK 1020

Query: 1095 NSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKL 1154
                      G T                    YDYLL++     T E V+ LL +  + 
Sbjct: 1021 ---------IGGT--------------------YDYLLNIKTVQYTEESVRELLKEAKQA 1051

Query: 1155 NEEVDDLRKATPESLWVKDL 1174
             +E++ ++K +   +W  D+
Sbjct: 1052 RDELEIMKKTSHIDMWKMDI 1071


>gi|401411475|ref|XP_003885185.1| hypothetical protein NCLIV_055820 [Neospora caninum Liverpool]
 gi|325119604|emb|CBZ55157.1| hypothetical protein NCLIV_055820 [Neospora caninum Liverpool]
          Length = 1641

 Score =  884 bits (2283), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/929 (49%), Positives = 621/929 (66%), Gaps = 54/929 (5%)

Query: 278  VTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK 336
            V + HE+   RWEI ++ ++G QFQQVSFVN I T KGG+HV +V   +   ++   N K
Sbjct: 351  VIKIHEK-QWRWEIVISSTDGGQFQQVSFVNSICTTKGGSHVTHVLEPLLAAIVKKANTK 409

Query: 337  NKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTA 395
            NK    +KA +VK HLW+FV+ LI NPAFDSQTKETLT + + FGSKC L+++ +  V  
Sbjct: 410  NKGGMEIKAAHVKQHLWIFVSCLIVNPAFDSQTKETLTTKPAKFGSKCTLADKTIGAVV- 468

Query: 396  KSGIVETLLSWANFKQSKDLKKN---DGTK-TEDVRGISKLEDANLAGGRNSEQCTLILT 451
            KS IVE ++ WA  KQ  +L+K      TK  E + GI KLEDAN AGGR+S++CTLILT
Sbjct: 469  KSSIVENVVLWAQTKQQVELRKQMKVGKTKGRERLSGIPKLEDANDAGGRHSQECTLILT 528

Query: 452  EGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGV 511
            EGDSAK   +AGLSVVGRDR+GVFPLRGKLLNVR+AS  Q+  N EI NI KI+GL+   
Sbjct: 529  EGDSAKTSCLAGLSVVGRDRYGVFPLRGKLLNVRDASFKQLTENKEIQNILKIVGLQVND 588

Query: 512  EYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLIN 571
               + + LRYG +MIMTDQ                            DHDGSHIKGLLIN
Sbjct: 589  RTEDARGLRYGSVMIMTDQ----------------------------DHDGSHIKGLLIN 620

Query: 572  FIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKY 631
             +H +WP LLK   FL  F+TPIVK + KN    +FY++P+YE WK S   N + W IKY
Sbjct: 621  MMHHYWPQLLKCRGFLKAFLTPIVKVS-KNNVEKAFYTIPEYEQWKRSC--NTTGWRIKY 677

Query: 632  YKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGN 691
            YKGLGTST +E KEYF +++ H+ DFVW    DGE I++AF+K++ E RK+WL  ++ G 
Sbjct: 678  YKGLGTSTDREFKEYFNDLSKHQIDFVWSGQHDGELIDMAFNKRRAEDRKRWLQSYQEGT 737

Query: 692  HLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKV 751
             +D     + Y+DFVNKELILFS  D +RSIP +VDG KPGQRK+LF   K+N   E KV
Sbjct: 738  FVDHNASSLSYADFVNKELILFSRYDTERSIPQLVDGWKPGQRKVLFACIKKNMKHEIKV 797

Query: 752  AQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASAR 811
            AQ +GYV+E SAYHHGE SL  TI+ MAQ FVGSNN+N L+P GQFG+R +GGKDA++AR
Sbjct: 798  AQLAGYVAEVSAYHHGEASLQQTIVTMAQRFVGSNNLNFLEPVGQFGSRKEGGKDASAAR 857

Query: 812  YIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYI 871
            YIFTRL+  TR +F + DD +L+Y  E+GQ+IEP  Y+P+IPTVL+NGSEGIGTGWSS++
Sbjct: 858  YIFTRLAFYTRLVFHEADDPILEYEYEEGQRIEPKMYVPVIPTVLINGSEGIGTGWSSFV 917

Query: 872  PNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETT 931
            PNYNPRD++ N+RR ++GE M+ M PWYRGF G IE+ +   AG  +  +G++E+  E  
Sbjct: 918  PNYNPRDVIENLRRYIDGEEMQRMTPWYRGFRGKIEENS---AGTGFETSGLVEKCGEGA 974

Query: 932  LRIKELPIRRWTQDYREFLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTK 988
              I ELPI++WTQDY+E+LE  +   ++ D+ I  +R  S    + F V +SEE + R +
Sbjct: 975  FEITELPIKKWTQDYKEWLEENLPTAEKRDTLIADYRDCSSHEEIHFTVKVSEERLERPE 1034

Query: 989  QEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENL 1048
            +EGL K FKL T++ST+N+ LFD  G +++Y    +I++EF  IRL+FY +RK   L  L
Sbjct: 1035 REGLEKYFKLKTSLSTTNLTLFDPHGRVQRYANELEIIKEFAPIRLDFYHRRKAYCLAML 1094

Query: 1049 ELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA-- 1106
            E     L N++RFIL VVNG++++NN+++  L+ EL  +G+ P  +   +  A +  A  
Sbjct: 1095 EKSRRILSNRLRFILAVVNGQLIINNKRKKVLVEELFSQGYDPMKEIEDAANAGIRAALK 1154

Query: 1107 -------TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVD 1159
                       E  EE  E+V G  +  YDYLL M + +LTLEKV+ L  +  +   E++
Sbjct: 1155 RDIAVDDEALAEGGEEEEEIVAGCTAKHYDYLLGMPMWSLTLEKVEDLRGEMREKELELE 1214

Query: 1160 DLRKATPESLWVKDLDALDMQLDELDKSD 1188
            +L++ + ++LW +DLDAL   LD+ D+ D
Sbjct: 1215 ELKRTSVQTLWKRDLDALVAALDKQDEID 1243



 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 151/262 (57%), Positives = 192/262 (73%), Gaps = 16/262 (6%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           TIE+ YQKKSQLEHILLRPDTYIGS E HTQ+LW+ EE  + M+++TI+YVPGLYKI DE
Sbjct: 36  TIEQRYQKKSQLEHILLRPDTYIGSTEMHTQSLWVMEEGQECMVYKTINYVPGLYKIVDE 95

Query: 86  ILVNAADNKQRDP-------------KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEG 132
           ILVNAAD K R+              +M A+K+ I++    I++ N G+G+PV IHQE  
Sbjct: 96  ILVNAADVKAREGEEKKGKPLKPGARRMSAIKIDINKSAGRITIWNDGEGIPVAIHQEHK 155

Query: 133 VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVF 192
           VYVPE+IFG LLTS NYDD+  + TGGRNGYGAKLTNIFS+EF +E ADG+R KK+K  +
Sbjct: 156 VYVPEMIFGQLLTSDNYDDSECRVTGGRNGYGAKLTNIFSSEFTVECADGERKKKFKMTW 215

Query: 193 TNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKS 252
           T NMG+K+EP IS    G ++ K+SF PD AKF M   +DD ++L++KR  DLAG  G  
Sbjct: 216 TRNMGQKTEPEISSYN-GTDYVKISFVPDFAKFGMRGFDDDSLSLLRKRAYDLAGTAG-- 272

Query: 253 VKVELNGHRVPVKSFAEYVDMY 274
           V+V LNG R+ V SF++YVD+Y
Sbjct: 273 VRVFLNGTRIDVSSFSQYVDLY 294


>gi|357541785|gb|AET84547.1| DNA gyrase subunit B [Ostreococcus lucimarinus virus OlV4]
          Length = 1074

 Score =  882 bits (2280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/1160 (42%), Positives = 694/1160 (59%), Gaps = 105/1160 (9%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E  QK + +EH+L RPD+Y+G ++  ++  W+  +       + I+Y P L KIFDEILV
Sbjct: 3    ESIQKLTHIEHVLKRPDSYVGPVDVSSEPYWLLHKTDNQFKKKNINYSPALLKIFDEILV 62

Query: 89   NAADNKQRDPK-MDAVKVVIDQEHDLISVHNSG--DGVPVEIHQEEGVYVPELIFGHLLT 145
            NA D     PK + ++   ID+E   +++ N+G   G+ V +H++EGV+ PEL FGHLLT
Sbjct: 63   NAIDRNSVHPKSVTSISAGIDKETGAVTIENNGPLGGIGVRMHEKEGVWNPELTFGHLLT 122

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            S+NYDD  K+  GGRNGYGAKLTNI+S+EF I   D +  + Y Q +  NM     P I+
Sbjct: 123  STNYDDTKKRIVGGRNGYGAKLTNIYSSEFSIVIKDHEAKQTYTQKWEKNMTVCHPPKIT 182

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K     +   ++F PD  +F M  ++ ++  + +KRV D   C   + KV+  G  +P  
Sbjct: 183  KHSGSTSSVSITFTPDWRRFGMKKMDANIYKIFEKRVWDANICTTPNCKVKFQGEVLPKT 242

Query: 266  SFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQV 325
            SF  Y  M+ + V        +RW +C+  SE   +QVSFVNGI+T KGGTHVD+VA+ +
Sbjct: 243  SFEAYAKMH-EGVKDVCSVTTDRWSVCIGPSENGLEQVSFVNGISTTKGGTHVDHVASLL 301

Query: 326  ANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL 385
            A+ ++  + KK K   +K   VKN   +FV A I+NP F SQ K   T +   FGSK E 
Sbjct: 302  ASGIIEEMAKKIK---LKPQQVKNTFNIFVKATIENPTFSSQVKSECTSKAQDFGSKFEP 358

Query: 386  SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQ 445
             + F+K    K+GI + L + + FK+ K+L K+DGT+   + GI KL+DAN AG   S +
Sbjct: 359  PKSFVKNA-LKTGIQDELTALSKFKEMKELSKSDGTRKSKITGIPKLDDANKAGTAQSGK 417

Query: 446  CTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKIL 505
            CTLI+TEGDSAK LA+AGLSVVGRD +GVFPLRGK  NVR+AS  Q+ +N E  ++KKIL
Sbjct: 418  CTLIVTEGDSAKTLAVAGLSVVGRDHYGVFPLRGKCKNVRDASVTQLTSNQEFNDLKKIL 477

Query: 506  GLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
            GL+QG +Y +V  LRYG LMIMTD                             D+DGSHI
Sbjct: 478  GLQQGKDYQDVSELRYGRLMIMTDA----------------------------DNDGSHI 509

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNAS 625
            KGL++N IH FWPSLLK+  F+V  +TPI+KA+ K  +  SFY+   + +W    G    
Sbjct: 510  KGLILNMIHYFWPSLLKL-GFVVSMVTPIIKAS-KGSQSKSFYTDSTFRSW---YGNGQP 564

Query: 626  SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD---GEAIELAFSKKKIEARKK 682
             W IKYYKGLGTSTS E +EYF+ I    +D   + D D     +I LAF KKK + RK 
Sbjct: 565  GWKIKYYKGLGTSTSAEAREYFKKI----QDLTVKFDMDIMSDRSIVLAFDKKKADDRKS 620

Query: 683  WLLQFEPGNHLDQKEKYIKY--------SDFVNKELILFSMADLQRSIPSMVDGLKPGQR 734
            WLL+       D KE  + Y        S+FV+K+L+ FS+ADL+RSI  M DGLKP QR
Sbjct: 621  WLLE---STAKDPKELEVPYGNVRNLSISNFVHKDLVNFSLADLKRSIAHMADGLKPSQR 677

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            K+++  F +N   E KVAQ + +V+E SAYHHGE SLA TI+ +A D++GSNNINLL+P 
Sbjct: 678  KVMYACFHKNLKDEMKVAQLAAFVAEKSAYHHGEVSLADTIVKLANDYMGSNNINLLEPC 737

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            GQFGTR  GGKDA+  RYIFT+L+   R +F   DD +L+YL++DG+ IEP +YMP +P 
Sbjct: 738  GQFGTRLMGGKDASQTRYIFTKLTKDARKIFDPRDDPILNYLDDDGRPIEPDFYMPTLPM 797

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            VLVNG+EGIGTG+S Y+P +NP+DI  N+++ L G     M PW++GF G I K    E+
Sbjct: 798  VLVNGTEGIGTGFSCYVPPFNPKDIKDNIQKALEGHGFTQMRPWFKGFKGKIFK--EDES 855

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVD 974
            G ++   GI  +   + L+I ELP  RWTQDY+E+L++++++    I  F   S    VD
Sbjct: 856  G-SWIAEGIWHDTG-SRLKITELPPGRWTQDYKEYLDTLMEKK--VITNFTNNSTTDDVD 911

Query: 975  FEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRL 1034
            FE+       +    + L+K  KL  +  TSNMHLF     I KY++PE+IL++F  +RL
Sbjct: 912  FEI-------VGYSGKDLVKDLKLRKSFHTSNMHLFHPTKGIYKYNSPEEILKDFVDLRL 964

Query: 1035 EFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPK 1094
            + Y+KR++  ++ L+ +      K +F+  V+ G+IVV  RKR DL  +L Q     FPK
Sbjct: 965  DHYKKRREHLIKVLQTKATMCGYKSKFVTMVIEGDIVVFKRKRDDLERQLSQ----IFPK 1020

Query: 1095 NSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKL 1154
                      G T                    YDYLL++     T E V+ LL +  + 
Sbjct: 1021 ---------IGGT--------------------YDYLLNIKTVQYTEESVRELLKEAKQA 1051

Query: 1155 NEEVDDLRKATPESLWVKDL 1174
             +E++ ++K +   +W  D+
Sbjct: 1052 RDELEIMKKTSHIDMWKMDI 1071


>gi|355725610|gb|AES08611.1| topoisomerase II alpha 170kDa [Mustela putorius furo]
          Length = 1237

 Score =  877 bits (2265), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/930 (49%), Positives = 622/930 (66%), Gaps = 61/930 (6%)

Query: 289  WEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNV 347
            WE+C+T+SE  FQQ+SFVN IAT KGG HVDY+A+Q+   ++ VV KKNK    VKAH V
Sbjct: 1    WEVCLTMSEKGFQQISFVNSIATSKGGRHVDYIADQIVTKLVDVVKKKNKGGVAVKAHQV 60

Query: 348  KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
            KNH+W+FVNALI+NP FDSQTKE +TL+  SFGS C LSE+F+K      GIVE++L+W 
Sbjct: 61   KNHMWIFVNALIENPTFDSQTKENMTLQVKSFGSTCLLSEKFIKAAIG-CGIVESILNWV 119

Query: 408  NFKQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSV 466
             FK    L KK    K   ++GI KL+DAN AGGRNS +CTLILTEGDSAK LA++GL V
Sbjct: 120  KFKAQIQLNKKCSAVKHNRIKGIPKLDDANDAGGRNSNECTLILTEGDSAKTLAVSGLGV 179

Query: 467  VGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGH 523
            VGRD++GVFPLRGK+LNVREAS  Q++ N+EI NI KI+GL+    Y   +++K+LRYG 
Sbjct: 180  VGRDKYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYEDEDSLKTLRYGK 239

Query: 524  LMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI 583
            +MIMTDQ                            D DGSHIKGLLINFIH  WPSLL+ 
Sbjct: 240  IMIMTDQ----------------------------DQDGSHIKGLLINFIHHNWPSLLR- 270

Query: 584  PSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEG 643
              FL EFITPIVK + KN + ++FYS+P++E WK S   N   W +KYYKGLGTSTSKE 
Sbjct: 271  HRFLEEFITPIVKVS-KNKQEMAFYSLPEFEEWKSSTP-NHKKWKVKYYKGLGTSTSKEA 328

Query: 644  KEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNH 692
            KEYF ++  H+  F +   +D  AI LAFSKK+I+ RK+WL  F            P ++
Sbjct: 329  KEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQIDDRKEWLTHFMEDRRQRKLLGLPEDY 388

Query: 693  L-DQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKV 751
            L  Q   Y+ Y+DF+NKELILFS +D +RSIPSMVDGLKPGQRK+LF  FKRN  +E KV
Sbjct: 389  LYGQTTTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQRKVLFTCFKRNDKREVKV 448

Query: 752  AQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASAR 811
            AQ +G V+E S+YHHGE SL  TI+ +AQ+FVGSNN+NLLQP GQFGTR  GGKD+AS R
Sbjct: 449  AQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRLHGGKDSASPR 508

Query: 812  YIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYI 871
            YIFT LSP+ R LFP  DD  L +L +D Q++EP WY+PIIP VL+NG+EGIGTGWS  I
Sbjct: 509  YIFTMLSPLARLLFPPKDDHTLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWSCKI 568

Query: 872  PNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETT 931
            PN++ R++V N+RRL++GE   PM P Y+ F GTIE+ A  +    Y ++G +  +N TT
Sbjct: 569  PNFDIREVVNNIRRLMDGEEPLPMLPSYKNFKGTIEELAPNQ----YVISGEVAILNSTT 624

Query: 932  LRIKELPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRT 987
            + I ELPIR WTQ Y+E  LE ++   ++    I  +R+Y  DTTV F V ++EE +   
Sbjct: 625  IEISELPIRTWTQTYKEQVLEPMLNGTEKTPPLITDYREYHTDTTVKFVVKMTEEKLAEA 684

Query: 988  KQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLEN 1047
            ++ GL K FKL T+++ ++M LFD  G +KKYDT   IL +FF +RL++Y  RK+  L  
Sbjct: 685  ERVGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTVLDILRDFFELRLKYYGLRKEWLLGM 744

Query: 1048 LELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNS--KSIEAVVAG 1105
            L  E  KL N+ RFIL  ++G+I++ N+ + +L+  L Q+G+   P  +  ++ + V   
Sbjct: 745  LGAESAKLNNQARFILEKIDGKIIIENKPKKELIKVLIQRGYDSDPVKAWKEAQQKVPDE 804

Query: 1106 ATDETEESEENPEVVNGVQ--SIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
              +E  ++E   E  + V+     ++YLL M +  LT EK   L   R++  +E++ L++
Sbjct: 805  EENEESDNENEAEKSDSVRDSGPTFNYLLDMPLWYLTKEKKDELCKLRNEKEQELETLKR 864

Query: 1164 ATPESLWVKDLDALDMQLDELDKSDARAEE 1193
             +P  LW +DL A   +L+ ++  + + E+
Sbjct: 865  KSPSDLWREDLAAFIEELEAVETKEKQEEQ 894


>gi|356980038|gb|AET43517.1| DNA topoisomerase IIB [Micromonas pusilla virus PL1]
          Length = 1036

 Score =  875 bits (2262), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/1060 (44%), Positives = 659/1060 (62%), Gaps = 69/1060 (6%)

Query: 29   EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
            E  QK + +EHIL RPD+Y+G +E  T+  W+ + ++ T   + + Y P L KIFDEILV
Sbjct: 2    ESVQKLTHIEHILKRPDSYVGPVELGTEHYWVLQGDAFT--KKNLKYSPALLKIFDEILV 59

Query: 89   NAADNKQRDPK-MDAVKVVIDQEHDLISVHNSG--DGVPVEIHQEEGVYVPELIFGHLLT 145
            NA D     PK + ++ V ID++   +++ N+G   G+ + +H++EG++ PEL FGHLLT
Sbjct: 60   NAIDRNSLHPKGVTSISVSIDKDRGSVTIENNGPLGGIGIRMHEKEGLWNPELTFGHLLT 119

Query: 146  SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            S+NYDDN K+  GGRNGYGAKLTNI+S+EF +   D +  + Y Q ++NNM    +P I 
Sbjct: 120  STNYDDNQKRVVGGRNGYGAKLTNIYSSEFSVIIKDHEVKQTYTQGWSNNMTTCHQPKIK 179

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
            K     +   ++F PD  +F M+ ++D +  + +KRV D   C   + KV+ NG  +P  
Sbjct: 180  KHSGATSSVSITFTPDWKRFGMSKMDDSIYQIFQKRVWDANICTTPNCKVKFNGDVLPKT 239

Query: 266  SFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQV 325
            SF  Y  M+ + V      V++RW +C+  +E   +QVSFVNGI T KGG HVD+VA+ V
Sbjct: 240  SFEAYAKMH-EGVENVCSVVSDRWSVCIGPAENGMEQVSFVNGICTTKGGNHVDHVASLV 298

Query: 326  ANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL 385
            A+ ++  + KK K   +K   VKN   +FV A ++NP F SQ K   T +   FGSK + 
Sbjct: 299  ASGIIEDMAKKIK---LKPQQVKNTFNIFVKATLENPTFSSQVKSECTSKSQDFGSKFDP 355

Query: 386  SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQ 445
             + F+K    K+GI + LL+ + FK+ K+LKK+DG +   + GI KL+DAN AG   S +
Sbjct: 356  PKNFIKNA-LKTGIQDELLALSKFKEMKELKKSDGARKSKITGIPKLDDANKAGTAQSGK 414

Query: 446  CTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKIL 505
            CTLI+TEGDSAK LA+AGLSVVGRD +GVFPLRGK  NVR+ S  Q+ +N E  ++KKIL
Sbjct: 415  CTLIVTEGDSAKTLAVAGLSVVGRDHYGVFPLRGKCKNVRDVSVAQLSSNQEFNDLKKIL 474

Query: 506  GLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
            GL+QG +Y +V  LRYG LMIMTD                             D+DGSHI
Sbjct: 475  GLQQGKDYKDVSELRYGRLMIMTDA----------------------------DNDGSHI 506

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNAS 625
            KGL++N IH FWPSLLK+  F+V  +TPI+KAT K  + +SFY+   +  W    G    
Sbjct: 507  KGLILNMIHYFWPSLLKL-GFVVSMVTPIIKAT-KGSESMSFYTDSAFRTW---YGSGKG 561

Query: 626  SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD---GEAIELAFSKKKIEARKK 682
             W IKYYKGLGTSTS E ++YF+ I    +D   + D D     +I LAF KK  ++RK 
Sbjct: 562  GWKIKYYKGLGTSTSAEARDYFKKI----QDLTVKFDMDVMTDTSIVLAFDKKMADSRKT 617

Query: 683  WLLQFEPGNHLDQKEKY-----IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKIL 737
            WLL        + +  Y     +  +DFV+K+L+ FS+ADL+RSI  + DGLKP QRK++
Sbjct: 618  WLLDSTAKEASELEVPYGNVKQLDITDFVHKDLVNFSLADLKRSIAHVADGLKPSQRKVM 677

Query: 738  FCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQF 797
            +  F++N   E KVAQ + YV+E SAYHHGE SLA TI+ +A D+ GSNNINLL+P GQF
Sbjct: 678  YSCFQKNLKDEMKVAQLAAYVAEKSAYHHGEVSLADTIVKLANDYTGSNNINLLEPCGQF 737

Query: 798  GTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLV 857
            GTR  GGKDA+  RYIFT+L+   R LF   DD +L+YL++DG+ IEP +YMP +P VLV
Sbjct: 738  GTRLMGGKDASQTRYIFTKLTKEARKLFDPKDDAILNYLDDDGRPIEPDFYMPTLPMVLV 797

Query: 858  NGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVT 917
            NG+EGIGTG+S Y+P +NP DI  N++R L GE +  M PW+RGF G + K    + G+ 
Sbjct: 798  NGTEGIGTGFSCYVPPFNPEDIKENIKRTLEGEDLIEMKPWFRGFKGRVYK---DDTGL- 853

Query: 918  YTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV 977
            +   GI  +   + L++ ELP  RWTQDY+E+L++++++    I  +   S    VDFE+
Sbjct: 854  WITEGIYRDTG-SRLKVTELPPGRWTQDYKEYLDTLVEKK--MINSYTNNSTTEDVDFEI 910

Query: 978  FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFY 1037
            F           + L+K  K+  T  TSNMHLF     I KY   E+IL +F  +RLE Y
Sbjct: 911  F-------GYTGKDLMKDLKMKKTFHTSNMHLFHPTRGIHKYANAEEILRDFVELRLEHY 963

Query: 1038 EKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
            +KRK   ++ L+   +   ++ +F+  V+ G++VV  +KR
Sbjct: 964  KKRKAHLVDVLQKRAVMCGHRAKFVSMVIEGDLVVFKKKR 1003


>gi|451927544|gb|AGF85422.1| topoisomerase 2 [Moumouvirus goulette]
          Length = 1263

 Score =  874 bits (2257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/1271 (39%), Positives = 725/1271 (57%), Gaps = 191/1271 (15%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK----TMIHRTISYVPGLYKIFDEI 86
            YQKK+  EHIL  PDTYIGSIE  T  +WIY E++K     +I++ I+YVPGLYKI+DE+
Sbjct: 17   YQKKNLHEHILHSPDTYIGSIEDKTCHMWIYNEKAKDGDAQIIYKEITYVPGLYKIYDEV 76

Query: 87   LVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
            LVNAAD+  R    + +KV I+Q+   I+V N+GDG+ V  H++  + VP +IFG LLTS
Sbjct: 77   LVNAADHNNRCDSCNIIKVNIEQDTGKITVWNNGDGIDVVEHKQHKILVPSMIFGELLTS 136

Query: 147  SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            +NYD N KKT GG+NG+G+KL NI+STEF +ET D KR KK+ Q FT+NM  K +  ++ 
Sbjct: 137  TNYDKNEKKTVGGKNGFGSKLANIYSTEFYVETVDVKRGKKFYQKFTDNMYNKEKAKVTS 196

Query: 207  CKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
             K    +TK++F PD  KF +  L DD++AL KKRV DLA  +  + K+  N   +P  +
Sbjct: 197  IKTKTPYTKITFVPDFKKFGLKGLTDDILALFKKRVYDLA--MTTTAKIFYNDKLIPQNN 254

Query: 267  FAEYVDMYPKSVTRFHERV----NERWEICVTL---SEGQFQQVSFVNGIATIKGGTHVD 319
            F +Y+D+Y    T  H++V      RW++C       + + Q +SFVN I T +GGTHVD
Sbjct: 255  FNKYIDLYFPEGTG-HKKVIDISQNRWKVCAVYDPTDQLEHQNISFVNSICTSRGGTHVD 313

Query: 320  YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
             V NQV  ++   V KK K   VK   +K +L  F++++I+NP FD+QTKE LT + ++F
Sbjct: 314  QVVNQVVKNLKEAVAKKVKGLQVKPTMIKENLIFFIDSIIENPDFDTQTKEYLTKKPTNF 373

Query: 380  GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG 439
            GS   ++++F+KKV  K+G+V  +++ A  K    L K DG     VR   KL +A+ AG
Sbjct: 374  GSNFVVTDDFIKKVI-KTGVVSQIIANAQAKAEASLSKTDGKGKGPVR-YEKLYNAHKAG 431

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
             +   +CTLILTEGDSAKA AM+GL+VVGRD +G+FPL+GK LNVR  S   V +N EI 
Sbjct: 432  TKEGYKCTLILTEGDSAKAFAMSGLNVVGRDYYGIFPLKGKPLNVRTKSPAIVASNEEIT 491

Query: 500  NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
             IKKI+GL+QG  YN++K LRYG +MI+ D                            QD
Sbjct: 492  AIKKIVGLEQGKVYNDLKELRYGSIMILAD----------------------------QD 523

Query: 560  HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT---NKNGKVLSFYSMPDYEAW 616
             DG HIKGL++N IH FWPSL K   F+  F TP++KA+    KN +V+ F +   +E W
Sbjct: 524  VDGYHIKGLIMNLIHRFWPSLAKYEGFIQSFATPLLKASKGKGKNREVIEFTNPQSFEEW 583

Query: 617  KESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWED--------------- 661
            K    G    W+IKYYKGLGTST+ E +E F ++   +  + WE                
Sbjct: 584  KLKNNG-GKGWTIKYYKGLGTSTAAEAQECFTDLDKKRIRYFWESKRVSEEKKKENTENK 642

Query: 662  ---------------------------DQDGEAIELAFSKKKIEARKKWLLQFEPGNHLD 694
                                       D   +AI LAF KK+ + RK W+  + P N++D
Sbjct: 643  KSKKKVKSDFIEEESDIISEIYKPRCKDLCEDAITLAFDKKREDDRKLWINTYNPNNYID 702

Query: 695  QKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIK-EAKVAQ 753
              +K + Y DF+++ELI FS+ D  RSIP+M DG KP QRK+ + S +    K E KV++
Sbjct: 703  NSQKRVSYYDFIHRELISFSVDDNMRSIPNMADGFKPSQRKVFYGSEEEGIYKEEIKVSE 762

Query: 754  FSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYI 813
              G VS+ + YHHGEQS+  TI+ MAQ++VGSNNINLL PNGQFGTR  GGKD ASARYI
Sbjct: 763  LQGAVSKRTKYHHGEQSMTETIIKMAQNYVGSNNINLLLPNGQFGTRLSGGKDNASARYI 822

Query: 814  FTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPN 873
            FT+L+ + +++F + D  +L +  ED + IEP +Y+P+IP +LVNG++GIGTG+S+ +P 
Sbjct: 823  FTQLNQLAKYIFVQHDFDVLQHQFEDNKMIEPVFYVPVIPMILVNGTDGIGTGYSTNVPP 882

Query: 874  YNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLR 933
             NPR+I  N+ R+LN +  + M PWYR F GT+EK  + +    Y      E +   T+ 
Sbjct: 883  CNPRNIHENILRILNDQKPKTMKPWYRNFTGTVEKIDNNK----YISRAKYEIIGNDTIH 938

Query: 934  IKELPIRRWTQDYREFLESIIDQ----------------NDSFIRG-------------- 963
            I +LPI  WT DY+ FL+++I+Q                 ++ +RG              
Sbjct: 939  ITDLPIGTWTDDYKAFLDNLINQGTFQRAEDKKAAKLAETETNVRGKSGTKKNTRSRNSK 998

Query: 964  --------------------------FRQYSDDTT---VDFEVFLSEESMMRTKQEGLLK 994
                                       + Y +D T   V F +      + +  ++G L 
Sbjct: 999  SSKFLAKKSQKSATAKVAKKNPVASSIKNYVEDCTEIRVSFTITFHPGKLSQLIKQGELD 1058

Query: 995  K-FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELL 1053
            K  KL + I  SNMHLF+  G IKKY++  +IL  F  +RLE Y+KRK   L   + E+ 
Sbjct: 1059 KGLKLVSHIRLSNMHLFNEFGKIKKYNSYTEILNNFIQVRLELYQKRKDYLLGKWKKEMD 1118

Query: 1054 KLENKVRFILGVVNGEIVV----NNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDE 1109
             L+ KV+FI  V++G I++     ++K+ +++ +L +  F  F          + GA   
Sbjct: 1119 MLKWKVKFIEYVIDGTIIIFKNGKSKKKEEIMKKLEELKFPKF----------ITGA--- 1165

Query: 1110 TEESEENPEVVNGVQSIDYDYLLSMAIGTLTL---EKVQGLLADRDKLNEEVDDLRKATP 1166
                E+NP          Y Y+ S  +  LTL   EK++ LLAD+    EE+  L   +P
Sbjct: 1166 ----EKNPS---------YTYITSTGLFNLTLEEVEKLKQLLADK---KEEIATLEAKSP 1209

Query: 1167 ESLWVKDLDAL 1177
            + +W+++LD  
Sbjct: 1210 KDIWIEELDLF 1220


>gi|290995679|ref|XP_002680410.1| DNA topoisomerase II [Naegleria gruberi]
 gi|284094031|gb|EFC47666.1| DNA topoisomerase II [Naegleria gruberi]
          Length = 1135

 Score =  873 bits (2256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 502/1192 (42%), Positives = 723/1192 (60%), Gaps = 96/1192 (8%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
            K+IE+ YQKK+ +EH+L RPDTY+GS E+  + L+  +  +   + + + ++P LY+I D
Sbjct: 8    KSIEQQYQKKTPIEHVLERPDTYVGSTERMKKKLFCLDSVNNIKL-KEVDFIPALYRIID 66

Query: 85   EILVNAADNKQRD-PKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
            EILVNA DN  R     + ++V ID+  + I + N+G  VPVE+H+ E +YVPEL+FG+L
Sbjct: 67   EILVNAVDNHHRKGTHTNELRVTIDEAKNWIHIRNNGKSVPVEMHKIEKIYVPELVFGNL 126

Query: 144  LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
            LT SN+DDN  K TGGRNGYGAKL NIFST+F IE  D K    Y Q +  NM + S P 
Sbjct: 127  LTGSNFDDNEVKFTGGRNGYGAKLANIFSTDFTIEIMDHKG-THYIQNWKKNMSQISTPT 185

Query: 204  ISKCKE-GDNWTKVSFKPDLAKFNMTHL--EDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
            I + K+  + + +VSF PD  KF  T L  E +++ L+K+R+ DL+ C  K + V LN  
Sbjct: 186  IVENKQKTEPYIQVSFHPDFKKFQSTGLNKELNMIDLLKRRIYDLSACNPK-LNVYLNDK 244

Query: 261  RVPVKSFAEYVDMYPKSVTR--------FHERVNERWEICVTLSEGQ-FQQVSFVNGIAT 311
            +V V +F EYV ++ ++ +          H+ + + WEI +  S G+ F Q+SFVN IAT
Sbjct: 245  KVEVDNFKEYVKLFYQNNSSGEHPEKMFVHKHICDGWEIAIGASVGEEFNQISFVNSIAT 304

Query: 312  IKGGTHVDYVANQVANHVMAVVNKK--NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTK 369
            ++GG+HV++V NQ++  +   + K   +    +  + V+NH+ +F+N+LI+NP FDSQTK
Sbjct: 305  VQGGSHVNFVLNQLSTKISEYIAKTYTDLQLTISPYMVRNHITLFINSLIENPTFDSQTK 364

Query: 370  ETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGI 429
            ETLT +  SF  K  +S + +  +   + I++ ++++AN+KQS    K    + E    I
Sbjct: 365  ETLTTKSISFAQKVVISNDLINSIANHTPIIDNIIAFANYKQSSASSKKFKKR-ESKLLI 423

Query: 430  SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS 489
             KL+DANLAG   S +C LILTEGDSAKALA++GLSVVGRDRFGVFPL+GKLLNVREAS+
Sbjct: 424  PKLDDANLAGTNRSMECVLILTEGDSAKALAISGLSVVGRDRFGVFPLKGKLLNVREASA 483

Query: 490  NQVLNNSEIGNIKKILGLKQGVEYNN----VKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
            +Q+ +N EI N+KKILGL    + ++     K LRYG +M+M D                
Sbjct: 484  DQIRDNQEIQNLKKILGLDDVSKTDSFEELTKRLRYGKVMLMCD---------------- 527

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL 605
                        QDHDGSHIKGLL+N IH F+P LL+  +F+ EFITPI+K + K   V 
Sbjct: 528  ------------QDHDGSHIKGLLLNMIHFFYPELLR-NNFVDEFITPIIKVS-KGSDVK 573

Query: 606  SFYSMPDYEAWKESLGGNASS-WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD 664
            SF+S+P+++ W   +  N  + W+ KYYKGLGT++SKE K+YF N+  H     ++DD +
Sbjct: 574  SFFSIPEFQNWWTKVPENEKNRWNQKYYKGLGTNSSKEAKDYFSNLKRHVIALQYDDDSE 633

Query: 665  GEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPS 724
               IELAFSK    ARK W+   + G  LD     +  +DF+N ELILFS  +  RSIPS
Sbjct: 634  PN-IELAFSKDLANARKSWVASLKDGTFLDTTNGKVTITDFINNELILFSNQNNIRSIPS 692

Query: 725  MVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVG 784
            +VDGLKP QRKILF   KR+   E KVAQ +GYVSEHSAYHHGEQSL  TI  MAQDFVG
Sbjct: 693  IVDGLKPSQRKILFACLKRDLKDEIKVAQLAGYVSEHSAYHHGEQSLYGTITSMAQDFVG 752

Query: 785  SNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIE 844
            +NNI LL P+GQFGTR QGG DAASARYI+TRL+ +TR +F K+DD++LDY  EDG  IE
Sbjct: 753  ANNIPLLYPSGQFGTRLQGGDDAASARYIYTRLNKLTRLIFLKEDDQILDYQEEDGMIIE 812

Query: 845  PTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN------GEMMEP-MHP 897
            P +Y+PIIP +LVNG+EG+GTGWS+ IP++NP D++ ++  LL+      G +  P +  
Sbjct: 813  PKFYLPIIPMLLVNGAEGMGTGWSTSIPSFNPIDLIDSLNILLDSNAENIGNVKLPSLDM 872

Query: 898  WYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN 957
            W RGF G IE   S +  ++  +  +    +     I ELPI  WT++Y+  L+S++ + 
Sbjct: 873  WARGFKGKIEMNDSGKF-ISKGIFKMKSRGDSIEFDISELPIGEWTENYKSHLQSLVKK- 930

Query: 958  DSFIRG-FRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
               I+    + + + +V F + +++       Q   LKK KL  + S SNM +F     I
Sbjct: 931  -GLIKSKITERNTENSVGFTIAINDPDEFSESQ---LKKLKLEKSFSLSNMTVFSENFDI 986

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
             ++     I+++F+ +RL +Y +RK   ++ LE ++  L NKV+F+        + +N  
Sbjct: 987  IQFSNVNDIIKQFYLVRLSYYHQRKSHLMKQLEKQIRILSNKVKFL------NFITSNES 1040

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAI 1136
              +  ++ +++    F  N      VV    D T   +             ++YL  M I
Sbjct: 1041 NLNTFIKTKKENIPSFLTN------VVGIVVDPTTIEQS------------FNYLTDMNI 1082

Query: 1137 GTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSD 1188
             +LT E    +    +   +E+  +    P+ +W +DL  L    DEL KS+
Sbjct: 1083 LSLTHEHKDRINKQLESAQQELQQVSSDDPKLMWKRDLKRLR---DELTKSE 1131


>gi|389585649|dbj|GAB68379.1| DNA topoisomerase II [Plasmodium cynomolgi strain B]
          Length = 1506

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/915 (50%), Positives = 609/915 (66%), Gaps = 55/915 (6%)

Query: 278  VTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK 336
            + + HE+   RWEI V+ ++G QFQQVSFVN I T KGG+HV+Y+  Q+ N +    N K
Sbjct: 336  IVKIHEK-QHRWEIVVSKTDGSQFQQVSFVNSICTTKGGSHVNYIVEQLLNSLSKKANAK 394

Query: 337  NKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTA 395
            NK    +K+ ++KNHLWVFVN LI NP FDSQTKETLT +   FGSKC LS++ +  V  
Sbjct: 395  NKGGMEIKSGHIKNHLWVFVNCLIVNPTFDSQTKETLTTKPVKFGSKCILSDKTINSV-L 453

Query: 396  KSGIVETLLSWANFKQSKDLKK----NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILT 451
            KS I+  +L WA  K   +L+K          E + GI KLEDAN AG + S++CTLILT
Sbjct: 454  KSPILSNILLWAQAKAQVELRKKMKAGSSKARERIIGIPKLEDANDAGSKYSQECTLILT 513

Query: 452  EGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK-QG 510
            EGDSAK   +AGLS+VGRDR+GVFPL+GKLLNVR+AS  Q+++N EI NI KI+GL    
Sbjct: 514  EGDSAKTSCLAGLSIVGRDRYGVFPLKGKLLNVRDASFKQLMDNKEIQNIFKIMGLDITD 573

Query: 511  VEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLI 570
                ++K LRYG LMIMTDQ                            D+DGSHIKGLLI
Sbjct: 574  KNKEDIKGLRYGSLMIMTDQ----------------------------DYDGSHIKGLLI 605

Query: 571  NFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIK 630
            N IH FWPSLLK   FL EF+TPIVK   K  +  SF+++ +YE WKES   N   W IK
Sbjct: 606  NMIHKFWPSLLKHKGFLSEFVTPIVKV-QKGNQEYSFFTIAEYEQWKEST--NLVGWKIK 662

Query: 631  YYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPG 690
            YYKGLGTST KE KEYF +I  HK  F+W  D+DG++I++AFSKK+IE RK WL  F  G
Sbjct: 663  YYKGLGTSTDKEFKEYFSDIKNHKIMFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFIIG 722

Query: 691  NHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAK 750
            +++D KEK + Y DFVNKELI +S  D +RSIP+++DG KPGQRK+L+  FKRN   E K
Sbjct: 723  SYVDHKEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCFKRNLKNECK 782

Query: 751  VAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASA 810
            VAQ  GY++EHSAYHHGE SL  TI+ MAQ FVGSNNIN L+P GQFG+R +GGKDA++A
Sbjct: 783  VAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGSRKEGGKDASAA 842

Query: 811  RYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSY 870
            RYIFT+L+  TR LF + DD +L YLNE+GQ+IEP +Y+P+IPT+LVNG EGIGTG+SS+
Sbjct: 843  RYIFTKLASSTRSLFNEYDDPILKYLNEEGQKIEPQYYIPVIPTILVNGCEGIGTGYSSF 902

Query: 871  IPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNET 930
            IPNYN +DI+ N++R +N E + PM PWY+ F G IE          Y   GII ++++ 
Sbjct: 903  IPNYNYKDIIENIKRYINKEELIPMIPWYKDFKGRIESNGK----TGYETIGIIHKIDDE 958

Query: 931  TLRIKELPIRRWTQDYREFLESII-DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQ 989
            TL I ELPI++WTQDY+EFLE ++ D+    I  +   S    + F + +    + + ++
Sbjct: 959  TLEINELPIKKWTQDYKEFLEELLTDEKSQLIVDYIDNSSHEDICFTIKMDPAKLKKAEE 1018

Query: 990  EGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLE 1049
            EGL K FKL +T++T+NM LFD    +++Y T   IL+EF   RL+ YE RK   +  LE
Sbjct: 1019 EGLEKVFKLKSTLTTTNMTLFDPNLKLQRYSTELDILKEFCFHRLKAYENRKNYLISKLE 1078

Query: 1050 LELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDE 1109
             E   + NK +FIL +VN E++V+ +K+  L+ EL +KG+ P+    K I  +      E
Sbjct: 1079 KEKKIISNKSKFILAIVNDELIVSKKKKKVLVEELYRKGYDPY----KDINKIKKEEIFE 1134

Query: 1110 TE--ESEENP----EVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
             E  ES ENP    E++ G+   DYDYLLSM I +LTLEKV+ LLA   +   E++ L+ 
Sbjct: 1135 QELLESAENPEDNEEIIAGISVKDYDYLLSMPIFSLTLEKVEELLAQLKEKERELEILKN 1194

Query: 1164 ATPESLWVKDLDALD 1178
             T E++W+KD++ ++
Sbjct: 1195 ITVETMWLKDIEKVE 1209



 Score =  310 bits (795), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 151/260 (58%), Positives = 196/260 (75%), Gaps = 8/260 (3%)

Query: 22  APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
           + NK+IEE YQKKSQ+EHILLRPDTYIGS+E HTQ LWI+ +E   MI + I+YVPGLYK
Sbjct: 2   SKNKSIEERYQKKSQIEHILLRPDTYIGSVEMHTQLLWIWNKERNRMIQKNITYVPGLYK 61

Query: 82  IFDEILVNAADNKQRDPK-----MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVP 136
           IFDEI+VNAAD K R+ +     M  +K+ I++E   ISV+N G+G+PV+IH+E  +YVP
Sbjct: 62  IFDEIIVNAADVKAREKEKSENPMTCIKIEINKEQKKISVYNDGEGIPVDIHKELNIYVP 121

Query: 137 ELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
            +IFG LLTS NYDD   + TGGRNG+GAKLTNIFS EFI++  D  R K++K V+T+NM
Sbjct: 122 HMIFGELLTSDNYDDAEDRITGGRNGFGAKLTNIFSKEFIVQCGDSSRKKEFKMVWTDNM 181

Query: 197 GKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVE 256
            K S+P+I K   G ++ KV+FKPDLAKF MT ++DD+ +L+ KRV DLAG    SV+V 
Sbjct: 182 SKFSDPHI-KNYNGKDYVKVTFKPDLAKFGMTEIDDDIESLLCKRVYDLAGTC--SVRVY 238

Query: 257 LNGHRVPVKSFAEYVDMYPK 276
           LNG+R+ +K F  YVD+Y K
Sbjct: 239 LNGNRLAIKDFKSYVDLYLK 258


>gi|397581930|gb|EJK52100.1| hypothetical protein THAOC_28668 [Thalassiosira oceanica]
          Length = 1027

 Score =  869 bits (2245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/1013 (46%), Positives = 642/1013 (63%), Gaps = 105/1013 (10%)

Query: 21   TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
            T  +KTIEE  QKKSQ EH+L+RPDTYIGS+E  TQ ++I+ E +  +  R I+Y PG Y
Sbjct: 98   TKTSKTIEETNQKKSQREHVLIRPDTYIGSVEPVTQPMFIFNETTNQIEERNITYTPGFY 157

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KI+DEI+VNAADNKQRDP MD +++ ID E + ISV N+G G+PV  H+E G YVP LIF
Sbjct: 158  KIYDEIVVNAADNKQRDPSMDRLEIEIDAETNTISVMNNGKGIPVVEHKEHGCYVPTLIF 217

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            GHLLT SN+DD+ KKTTGGRNGYGAKL NIFSTEF +E  D +  K++ Q F +NM +  
Sbjct: 218  GHLLTGSNFDDDEKKTTGGRNGYGAKLANIFSTEFTVECLDTENEKQFTQTFRDNMSRTE 277

Query: 201  EPNISKC-----KEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCL----GK 251
            +P++ K      K+GD +TK++FKPDL +FNM  L++  V L+ +R  D+AG +    GK
Sbjct: 278  DPSVKKATKSEMKKGD-YTKITFKPDLNRFNMEKLDEYAVGLLSRRAYDIAGSMSGKGGK 336

Query: 252  SVKVELNGHRVPVKSFAEYVDMYPK-SVTRFHERVNERWEICVTL-SEGQ-FQQVSFVNG 308
             + V LNG ++P+K F  Y+ ++         ERVN+ WE+ V + +EG   +Q+SFVN 
Sbjct: 337  KLSVFLNGKKLPIKDFKSYLALFDDLDAPLAFERVNDDWEVGVGVNTEGSGMKQISFVNA 396

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            IAT KGG+HV+++ +++   V AVV K+NK     +   +KNHL VF+N L++NP FDSQ
Sbjct: 397  IATTKGGSHVNFITSKIVKAVQAVVEKRNKGGKKAQPAQIKNHLTVFINCLVENPTFDSQ 456

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
            TKE +TL+QSSF  K  LS++F+K+  +           A +K               ++
Sbjct: 457  TKENMTLKQSSFNKKIALSDQFMKRWKS-----------AAYK---------------LK 490

Query: 428  GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
            GI+KL+DAN AG   S+ CTLI+TEGDSAK+LA++GLSVVGRD +GVFPL+GK LNVR+A
Sbjct: 491  GITKLDDANNAGTAKSKDCTLIITEGDSAKSLAVSGLSVVGRDFYGVFPLKGKPLNVRDA 550

Query: 488  SSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
            +  Q++ N EI N+ +I+GLK    Y   N+KSLRYGHLMIM D                
Sbjct: 551  THAQIMKNEEIMNLVEIMGLKFKTTYTKENIKSLRYGHLMIMAD---------------- 594

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL 605
                        QDHDGSHIKGL+INFIH FWPSLL +P FL +FITPIVK T K  K  
Sbjct: 595  ------------QDHDGSHIKGLIINFIHHFWPSLLDVPGFLQQFITPIVKCT-KGKKSE 641

Query: 606  SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG 665
            +F+++P+Y  WKE  G +A  WSIKYYKGLGTSTS E K+YF N+  H  +F        
Sbjct: 642  TFFTLPEYNEWKEGTGDDARGWSIKYYKGLGTSTSNEAKQYFSNLESHVIEFNRLSTDIP 701

Query: 666  EAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSM 725
            +  +    +++  +  +       G+ L Q+    K+      ++  +S  D+ RS+P +
Sbjct: 702  DEDDDDVGEEEGASIPR------SGDDLIQRFFSKKFDKKQWMKIRAYSTYDVDRSLPHV 755

Query: 726  VDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGS 785
             DGLK  QRK+LF  FK+    E KVAQ +GY+ EHSAYHHGEQSL STI+GMAQ++VG+
Sbjct: 756  FDGLKTSQRKVLFACFKKKLKNEIKVAQLAGYIGEHSAYHHGEQSLHSTIIGMAQNYVGT 815

Query: 786  NNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEP 845
            NNINLL P+GQFGTR  GGK         +R S +   LF  D  +           IEP
Sbjct: 816  NNINLLYPSGQFGTRRMGGK---------SRDSRLDTSLFSHDISRF----------IEP 856

Query: 846  TWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGT 905
             +YMP+IP +LVNG + IGTGWSS +P ++PR+I++N+R+++  E  E MHP+  G+ G 
Sbjct: 857  EFYMPVIPMLLVNGCQAIGTGWSSTVPQFSPREIISNLRKMIRKEDPEEMHPFNSGWMGE 916

Query: 906  IEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFR 965
            +E   + + G  Y   G I   NETTL I ELP+ +WTQDY+ FLE ++  ++   R   
Sbjct: 917  LE--CNSKGG--YKFKGKIRRKNETTLVITELPVGKWTQDYKMFLEGLMASDEEKERDIE 972

Query: 966  QYSD---DTTVDFEV-FLSEE-SMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
            +  +   DT + F +  LS++  +    ++GLL KFKL    + SNM + DS+
Sbjct: 973  EALENHTDTQISFTIKALSDKLDVFEESKDGLLGKFKLVQNRTFSNMQVRDSE 1025


>gi|340502362|gb|EGR29059.1| hypothetical protein IMG5_163890 [Ichthyophthirius multifiliis]
          Length = 967

 Score =  869 bits (2245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/933 (50%), Positives = 618/933 (66%), Gaps = 54/933 (5%)

Query: 227  MTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRF----- 281
            M  L +D V L+KKRV D++G    ++KV LN   + +KSF+ Y++M+   V        
Sbjct: 1    MESLTEDTVCLLKKRVYDMSGIFNTNLKVFLNEQAIKIKSFSHYINMFLPEVDESLKIYD 60

Query: 282  HERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN 341
             E   +RWEI +T S+G F+QVSFVN I T +GG HVDY+ +++   +   + KKNK+ +
Sbjct: 61   KEMKTDRWEILLTFSDGVFKQVSFVNAICTSRGGKHVDYIVDKIVERIQEQIQKKNKDLD 120

Query: 342  VKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVE 401
            +K + +K+H+++FVNALI NP FDSQTKETLT + S FGSK E+SE+F+K +  K+GIVE
Sbjct: 121  IKPYQIKSHIFLFVNALIVNPTFDSQTKETLTTKASQFGSKPEISEKFIKAI-LKTGIVE 179

Query: 402  TLLSWANFKQSKDLKKN-DGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALA 460
             +++ A  +++  L+K   G K   + GI KL+DAN AG   SE CTLILTEGDSAKALA
Sbjct: 180  QIVNQAKARENSKLQKTLKGGKKARITGIPKLDDANDAGTARSENCTLILTEGDSAKALA 239

Query: 461  MAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQG-VEYNNVKSL 519
            MAG+ VVGRD FGVFPLRGKLLNVREA   Q+++N EI N+ KI+GL      Y N KSL
Sbjct: 240  MAGIEVVGRDNFGVFPLRGKLLNVREAPKKQIMDNQEIQNLCKIMGLDPSKTNYENTKSL 299

Query: 520  RYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPS 579
            RYG +MIMTD                            QD DGSHIKGLLINFIH FWPS
Sbjct: 300  RYGSIMIMTD----------------------------QDSDGSHIKGLLINFIHYFWPS 331

Query: 580  LLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTST 639
            L ++  FL EF+TPI+KAT K  ++ SF+++ D++ +    G     + +KYYKGLGTST
Sbjct: 332  LFRMNGFLKEFVTPIIKAT-KGNEIHSFFTIQDFKNFATQQGNRLKQYKVKYYKGLGTST 390

Query: 640  SKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKY 699
             KE KEYF N+  H+  F++EDD+D + IEL FS+KKI+ RK WL  + P   +D   K 
Sbjct: 391  DKEAKEYFSNVYDHQIKFLYEDDEDFQRIELGFSRKKIQERKDWLAIYNPNLFVDYNIKQ 450

Query: 700  IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVS 759
            +++ DF++KELI FS +D  RSIPS+VDGLKPGQRKILF  FKRN   E KVAQ  GYV+
Sbjct: 451  LRFKDFIDKELIHFSNSDNLRSIPSVVDGLKPGQRKILFACFKRNLKNEIKVAQLQGYVA 510

Query: 760  EHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSP 819
            EHSAYHHGEQSLA TI+ MAQ+FVG+NNI+LL+P GQFGTRNQGGK+ AS+RYIFT LSP
Sbjct: 511  EHSAYHHGEQSLAQTIINMAQNFVGANNISLLEPIGQFGTRNQGGKEHASSRYIFTNLSP 570

Query: 820  ITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDI 879
            ITR +FP+ DD  L YL +D Q +EP WY+PIIP  LVNGSEGIGTGWS+ IPNYN R+I
Sbjct: 571  ITRLIFPEPDDHSLKYLEDDSQLVEPEWYIPIIPLCLVNGSEGIGTGWSTNIPNYNHREI 630

Query: 880  VANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIE-EVNETTLRIKELP 938
            V  +R  L+G+    +HPWY+GF GTIE   S + G  Y   G  + +  E T+RI ELP
Sbjct: 631  VEQIRNRLDGKPFTQIHPWYKGFQGTIE--ISNKGG--YITKGKWDIDEEEETIRITELP 686

Query: 939  IRRWTQDYREFLESII----DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLK 994
            + +WT+DY+ +LE +I    DQ D  +   R+Y  +  VDF+V   +  M     E   K
Sbjct: 687  VGKWTKDYKNYLEELINPAKDQPD--LEDIREYHTNNRVDFQVQCVKGKMQSWDIE---K 741

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
            KFKL+ T   +NM LFD +  +K+Y   E+ILE F+ IRLE YEKRK   L  L+ ++  
Sbjct: 742  KFKLSNTFQITNMVLFDKEHKLKRYGGTEEILEYFYGIRLELYEKRKIYLLSKLQRDMDI 801

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESE 1114
            L NK+RFI  VVNGE+ + N KR  L+ ++ Q    P  K  K +  ++    +E ++  
Sbjct: 802  LTNKMRFINYVVNGELELRNVKRKILIQKMAQLKLLPMKKKMKKLIELMINQDEEDKDQF 861

Query: 1115 ENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGL 1147
            E+P   N  Q+ +Y+YLL M I +LT EKV+ L
Sbjct: 862  EDP---NDYQANEYNYLLVMPIYSLTEEKVEQL 891


>gi|124809097|ref|XP_001348490.1| DNA topoisomerase II, putative [Plasmodium falciparum 3D7]
 gi|23497385|gb|AAN36929.1|AE014821_16 DNA topoisomerase II, putative [Plasmodium falciparum 3D7]
          Length = 1472

 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/932 (48%), Positives = 613/932 (65%), Gaps = 47/932 (5%)

Query: 278  VTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK 336
            + + HE+   RWEI V+ S+G QFQQVSFVN I T KGG+HV+Y+  Q+ + +    N K
Sbjct: 321  IVKIHEK-QHRWEIVVSKSDGSQFQQVSFVNSICTTKGGSHVNYIVEQLLSSLSKKANAK 379

Query: 337  NKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTA 395
            NK    +K+ +++NHLWVFVN LI NP FDSQTKETLT +   FGSKC LS++ +  V  
Sbjct: 380  NKGGMEIKSGHIRNHLWVFVNCLIVNPTFDSQTKETLTTKPVKFGSKCILSDKTINNV-L 438

Query: 396  KSGIVETLLSWANFKQSKDLKK----NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILT 451
            KS I+  +L WA  K   +LKK          E + GI KLEDAN AG + S++CTLILT
Sbjct: 439  KSPILSNILLWAQAKAQVELKKKMKAGSSKARERIIGIPKLEDANDAGSKYSQECTLILT 498

Query: 452  EGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK-QG 510
            EGDSAK   +AGLS+VGRD++GVFPL+GKLLNVR+AS  Q+++N EI NI +I+GL    
Sbjct: 499  EGDSAKTSCLAGLSIVGRDKYGVFPLKGKLLNVRDASFKQLMDNKEIQNIFRIMGLDITD 558

Query: 511  VEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLI 570
               +++K LRYG LMIMTDQ                            D+DGSHIKGLLI
Sbjct: 559  KNKDDIKGLRYGSLMIMTDQ----------------------------DYDGSHIKGLLI 590

Query: 571  NFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIK 630
            N IH FWPSLLK   FL EF+TPIVK   K  +  SF+++ +YE WKE+   N   W IK
Sbjct: 591  NMIHKFWPSLLKHKGFLSEFVTPIVKV-QKGSQEYSFFTIAEYEQWKENT--NLLGWKIK 647

Query: 631  YYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPG 690
            YYKGLGTST +E K+YF +I  HK  F+W  D+DG++I++AFSKK+IE RK WL  F  G
Sbjct: 648  YYKGLGTSTDREFKQYFSDIKNHKIMFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFILG 707

Query: 691  NHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAK 750
            +++D KEK + Y DFVNKELI +S  D +RSIP+++DG KPGQRK+L+  FKRN   E K
Sbjct: 708  SYVDHKEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCFKRNLRNECK 767

Query: 751  VAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASA 810
            VAQ  GY++EHSAYHHGE SL  TI+ MAQ FVGSNNIN L+P GQFG+R +GGKDA++A
Sbjct: 768  VAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGSRKEGGKDASAA 827

Query: 811  RYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSY 870
            RYIFT+L+  TR +F + DD +L YLNE+GQ+IEP +Y+P+IPT+LVNG EGIGTG+SS+
Sbjct: 828  RYIFTKLASSTRSIFNEYDDPILKYLNEEGQKIEPQYYIPVIPTILVNGCEGIGTGYSSF 887

Query: 871  IPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNET 930
            IPNYN +DI+ N++R +N E + PM PWY+ F G IE          Y   GII +++  
Sbjct: 888  IPNYNYKDIIDNIKRYINKEPLIPMVPWYKDFKGRIESNGK----TGYETIGIINKIDND 943

Query: 931  TLRIKELPIRRWTQDYREFLESII-DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQ 989
            TL I ELPI++WTQDY+EFLE ++ D+    I  +   S    + F + +    + + ++
Sbjct: 944  TLEITELPIKKWTQDYKEFLEELLTDEKHQLILDYIDNSSHEDICFTIKMDPAKLQKAEE 1003

Query: 990  EGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLE 1049
            EGL K FKL +T++T+NM LFD    +++Y T   IL+EF + RL+ YE RK   +  LE
Sbjct: 1004 EGLEKVFKLKSTLTTTNMTLFDPNLKLQRYSTELDILKEFCYQRLKAYENRKSYLISKLE 1063

Query: 1050 LELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP--KNSKSIEAVVAGAT 1107
             E   + NK +FIL +VN E++VN +K+  L+ EL +KG+ P+      K  E       
Sbjct: 1064 KEKRIISNKTKFILAIVNNELIVNKKKKKVLVEELYRKGYDPYKDINKIKKEEIFEQELL 1123

Query: 1108 DETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPE 1167
            D  +  E+N E++ G+   DYDYLLSM I +LTLEKV+ LL    +   E++ LR  T E
Sbjct: 1124 DAADNPEDNEEIIAGITVKDYDYLLSMPIFSLTLEKVEDLLTQLKEKERELEILRNITVE 1183

Query: 1168 SLWVKDLDALDMQLDELDKSDARAEEERMKIK 1199
            ++W+KD++ ++  ++     +    EE  K K
Sbjct: 1184 TMWLKDIEKVEEAIEFQRNVELSNREESNKFK 1215



 Score =  308 bits (790), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 149/258 (57%), Positives = 193/258 (74%), Gaps = 8/258 (3%)

Query: 22  APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
           A NKTIEE YQKKSQ+EHILLRPDTYIGS+E HTQ LW++ +E   M+ + I+YVPGLYK
Sbjct: 2   AKNKTIEERYQKKSQIEHILLRPDTYIGSVEMHTQLLWVWNKEKNRMVQKNITYVPGLYK 61

Query: 82  IFDEILVNAADNKQRDPK-----MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVP 136
           IFDEI+VNAAD K R+ +     M  +K+ I++E+  ISV+N G+G+PV+IH+E  +YVP
Sbjct: 62  IFDEIIVNAADVKAREKEKSENPMTCIKIEINKENKRISVYNDGEGIPVDIHKEMNIYVP 121

Query: 137 ELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
            +IFG LLTS NYDD   + TGGRNG+GAKLTNIFS EFI++  D  R K++K  +++NM
Sbjct: 122 HMIFGELLTSDNYDDAEDRITGGRNGFGAKLTNIFSKEFIVQCGDSSRKKEFKMTWSDNM 181

Query: 197 GKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVE 256
            K SEP+I K   G ++ KV+FKPDL KF MT ++DD+ +L+ KRV DLAG    SV+V 
Sbjct: 182 SKFSEPHI-KNYNGKDYVKVTFKPDLNKFGMTEMDDDIESLLFKRVYDLAGTC--SVRVY 238

Query: 257 LNGHRVPVKSFAEYVDMY 274
           LNG R+ VK F  YVD+Y
Sbjct: 239 LNGQRLAVKDFKSYVDLY 256


>gi|7437445|pir||T10466 DNA topoisomerase (ATP-hydrolyzing) (EC 5.99.1.3) II - malaria
            parasite (Plasmodium falciparum)
 gi|3980316|emb|CAA55900.1| DNA topoisomerase (ATP-hydrolysing) [Plasmodium falciparum]
          Length = 1397

 Score =  865 bits (2236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/932 (48%), Positives = 613/932 (65%), Gaps = 47/932 (5%)

Query: 278  VTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK 336
            + + HE+   RWEI V+ S+G QFQQVSFVN I T KGG+HV+Y+  Q+ + +    N K
Sbjct: 321  IVKIHEK-QHRWEIVVSKSDGSQFQQVSFVNSICTTKGGSHVNYIVEQLLSSLSKKANAK 379

Query: 337  NKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTA 395
            NK    +K+ +++NHLWVFVN LI NP FDSQTKETLT +   FGSKC LS++ +  V  
Sbjct: 380  NKGGMEIKSGHIRNHLWVFVNCLIVNPTFDSQTKETLTTKPVKFGSKCILSDKTINNV-L 438

Query: 396  KSGIVETLLSWANFKQSKDLKK----NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILT 451
            KS I+  +L WA  K   +LKK          E + GI KLEDAN AG + S++CTLILT
Sbjct: 439  KSPILSNILLWAQAKAQVELKKKMKAGSSKARERIIGIPKLEDANDAGSKYSQECTLILT 498

Query: 452  EGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK-QG 510
            EGDSAK   +AGLS+VGRD++GVFPL+GKLLNVR+AS  Q+++N EI NI +I+GL    
Sbjct: 499  EGDSAKTSCLAGLSIVGRDKYGVFPLKGKLLNVRDASFKQLMDNKEIQNIFRIMGLDITD 558

Query: 511  VEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLI 570
               +++K LRYG LMIMTDQ                            D+DGSHIKGLLI
Sbjct: 559  KNKDDIKGLRYGSLMIMTDQ----------------------------DYDGSHIKGLLI 590

Query: 571  NFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIK 630
            N IH FWPSLLK   FL EF+TPIVK   K  +  SF+++ +YE WKE+   N   W IK
Sbjct: 591  NMIHKFWPSLLKHKGFLSEFVTPIVKV-QKGSQEYSFFTIAEYEQWKEN--TNLLGWKIK 647

Query: 631  YYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPG 690
            YYKGLGTST +E K+YF +I  HK  F+W  D+DG++I++AFSKK+IE RK WL  F  G
Sbjct: 648  YYKGLGTSTDREFKQYFSDIKNHKIMFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFILG 707

Query: 691  NHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAK 750
            +++D KEK + Y DFVNKELI +S  D +RSIP+++DG KPGQRK+L+  FKRN   E K
Sbjct: 708  SYVDHKEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCFKRNLRNECK 767

Query: 751  VAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASA 810
            VAQ  GY++EHSAYHHGE SL  TI+ MAQ FVGSNNIN L+P GQFG+R +GGKDA++A
Sbjct: 768  VAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGSRKEGGKDASAA 827

Query: 811  RYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSY 870
            RYIFT+L+  TR +F + DD +L YLNE+GQ+IEP +Y+P+IPT+LVNG EGIGTG+SS+
Sbjct: 828  RYIFTKLASSTRSIFNEYDDPILKYLNEEGQKIEPQYYIPVIPTILVNGCEGIGTGYSSF 887

Query: 871  IPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNET 930
            IPNYN +DI+ N++R +N E + PM PWY+ F G IE          Y   GII +++  
Sbjct: 888  IPNYNYKDIIDNIKRYINKEPLIPMVPWYKDFKGRIESNGK----TGYETIGIINKIDND 943

Query: 931  TLRIKELPIRRWTQDYREFLESII-DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQ 989
            TL I ELPI++WTQDY+EFLE ++ D+    I  +   S    + F + +    + + ++
Sbjct: 944  TLEITELPIKKWTQDYKEFLEELLTDEKHQLILDYIDNSSHEDICFTIKMDPAKLQKAEE 1003

Query: 990  EGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLE 1049
            EGL K FKL +T++T+NM LFD    +++Y T   IL+EF + RL+ YE RK   +  LE
Sbjct: 1004 EGLEKVFKLKSTLTTTNMTLFDPNLKLQRYSTELDILKEFCYQRLKAYENRKSYLISKLE 1063

Query: 1050 LELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP--KNSKSIEAVVAGAT 1107
             E   + NK +FIL +VN E++VN +K+  L+ EL +KG+ P+      K  E       
Sbjct: 1064 KEKRIISNKTKFILAIVNNELIVNKKKKKVLVEELYRKGYDPYKDINKIKKEEIFEQELL 1123

Query: 1108 DETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPE 1167
            D  +  E+N E++ G+   DYDYLLSM I +LTLEKV+ LL    +   E++ LR  T E
Sbjct: 1124 DAADNPEDNEEIIAGITVKDYDYLLSMPIFSLTLEKVEDLLTQLKEKERELEILRNITVE 1183

Query: 1168 SLWVKDLDALDMQLDELDKSDARAEEERMKIK 1199
            ++W+KD++ ++  ++     +    EE  K K
Sbjct: 1184 TMWLKDIEKVEEAIEFQRNVELSNREESNKFK 1215



 Score =  308 bits (789), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 149/258 (57%), Positives = 193/258 (74%), Gaps = 8/258 (3%)

Query: 22  APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
           A NKTIEE YQKKSQ+EHILLRPDTYIGS+E HTQ LW++ +E   M+ + I+YVPGLYK
Sbjct: 2   AKNKTIEERYQKKSQIEHILLRPDTYIGSVEMHTQLLWVWNKEKNRMVQKNITYVPGLYK 61

Query: 82  IFDEILVNAADNKQRDPK-----MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVP 136
           IFDEI+VNAAD K R+ +     M  +K+ I++E+  ISV+N G+G+PV+IH+E  +YVP
Sbjct: 62  IFDEIIVNAADVKAREKEKSENPMTCIKIEINKENKRISVYNDGEGIPVDIHKEMNIYVP 121

Query: 137 ELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
            +IFG LLTS NYDD   + TGGRNG+GAKLTNIFS EFI++  D  R K++K  +++NM
Sbjct: 122 HMIFGELLTSDNYDDAEDRITGGRNGFGAKLTNIFSKEFIVQCGDSSRKKEFKMTWSDNM 181

Query: 197 GKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVE 256
            K SEP+I K   G ++ KV+FKPDL KF MT ++DD+ +L+ KRV DLAG    SV+V 
Sbjct: 182 SKFSEPHI-KNYNGKDYVKVTFKPDLNKFGMTEMDDDIESLLFKRVYDLAGTC--SVRVY 238

Query: 257 LNGHRVPVKSFAEYVDMY 274
           LNG R+ VK F  YVD+Y
Sbjct: 239 LNGQRLAVKDFKSYVDLY 256


>gi|221060064|ref|XP_002260677.1| DNA topoisomerase II [Plasmodium knowlesi strain H]
 gi|193810751|emb|CAQ42649.1| DNA topoisomerase II, putative [Plasmodium knowlesi strain H]
          Length = 1506

 Score =  861 bits (2224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/914 (50%), Positives = 610/914 (66%), Gaps = 53/914 (5%)

Query: 278  VTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK 336
            + + HE+   RWEI V+ ++G QFQQVSFVN I T KGG+HV+Y+  Q+ N +    N K
Sbjct: 321  IVKIHEK-QHRWEIVVSKTDGSQFQQVSFVNSICTTKGGSHVNYIVEQLLNSLSKKANAK 379

Query: 337  NKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTA 395
            NK    +K+ ++KNHLWVFVN LI NP FDSQTKETLT +   FGSKC LS++ +  V  
Sbjct: 380  NKGGMEIKSGHIKNHLWVFVNCLIVNPTFDSQTKETLTTKPVKFGSKCILSDKTINGVL- 438

Query: 396  KSGIVETLLSWANFKQSKDLKK----NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILT 451
            KS I+  +L WA  K   +L+K          E + GI KLEDAN AG ++S+ CTLILT
Sbjct: 439  KSSILSNILLWAQAKAQVELRKKMKAGSSKARERIIGIPKLEDANDAGSKHSQDCTLILT 498

Query: 452  EGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK-QG 510
            EGDSAK   +AGLS+VGRD++GVFPL+GKLLNVR+AS  Q+++N EI NI KI+GL    
Sbjct: 499  EGDSAKTSCLAGLSIVGRDKYGVFPLKGKLLNVRDASFKQLMDNKEIQNIFKIMGLDITD 558

Query: 511  VEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLI 570
                ++K LRYG LMIMTDQ                            D+DGSHIKGLLI
Sbjct: 559  KNKEDIKGLRYGSLMIMTDQ----------------------------DYDGSHIKGLLI 590

Query: 571  NFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIK 630
            N IH FWPSLLK   FL EF+TPIVK   K  +  SF+++ +YE WKES   N   W IK
Sbjct: 591  NMIHKFWPSLLKHKGFLSEFVTPIVKV-QKGNQEHSFFTIAEYEEWKEST--NLVGWKIK 647

Query: 631  YYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPG 690
            YYKGLGTST KE K+YF +I  HK  F+W  D+DG++I++AFSKK+IE RK WL  F  G
Sbjct: 648  YYKGLGTSTDKEFKQYFSDIKNHKIMFLWTGDRDGDSIDMAFSKKRIEDRKIWLQNFVIG 707

Query: 691  NHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAK 750
            +++D KEK + Y DFVNKELI +S  D +RSIP+++DG KPGQRK+L+  FKRN   E K
Sbjct: 708  SYVDHKEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCFKRNLKNECK 767

Query: 751  VAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASA 810
            VAQ  GY++EHSAYHHGE SL  TI+ MAQ FVGSNNIN L+P GQFG+R +GGKDA++A
Sbjct: 768  VAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGSRKEGGKDASAA 827

Query: 811  RYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSY 870
            RYIFT+L+  TR +F + DD +L YLNE+GQ+IEP +Y+P+IPT+LVNG EGIGTG+SS+
Sbjct: 828  RYIFTKLASCTRSIFNEYDDPILKYLNEEGQKIEPKYYIPVIPTILVNGCEGIGTGYSSF 887

Query: 871  IPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNET 930
            IPNYN +DI+ N++R +N E + PM PWY+ F G IE          +   GII ++++ 
Sbjct: 888  IPNYNYKDIIENIKRYINKEPLIPMIPWYKDFKGRIESNGK----TGFETIGIIRKIDDE 943

Query: 931  TLRIKELPIRRWTQDYREFLESII-DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQ 989
            TL I ELPI++WTQDY+EFLE ++ D+ +  I  +   S    + F + +    + + ++
Sbjct: 944  TLEINELPIKKWTQDYKEFLEELLTDEKNQLILDYIDNSSHEEICFTIKMDPAKLRKAEE 1003

Query: 990  EGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLE 1049
            EGL K FKL +T++T+NM LFD    ++KY T   IL+EF   RL  YE RK   +  LE
Sbjct: 1004 EGLEKVFKLKSTLTTTNMTLFDYNLKLQKYATELDILKEFCFQRLNAYENRKSYLIAKLE 1063

Query: 1050 LELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-----KNSKSIEAVVA 1104
             E   + NK +FIL +VN E+VVN +K+  L+ EL +KG+ P+      K  +  E  + 
Sbjct: 1064 KEKKIISNKSKFILAIVNNELVVNKKKKKVLVEELYRKGYDPYKDINKIKKEEIFEQELL 1123

Query: 1105 GATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKA 1164
             A D  E++E   E++ G+   DYDYLLSM I +LTLEKV+ L+A   +  +E++ LR  
Sbjct: 1124 EAADNPEDNE---EIIAGISVKDYDYLLSMPIFSLTLEKVEELIAQHKEKEKELEILRNI 1180

Query: 1165 TPESLWVKDLDALD 1178
            T E++W+KD++ ++
Sbjct: 1181 TVETMWLKDIEKVE 1194



 Score =  310 bits (794), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 150/260 (57%), Positives = 195/260 (75%), Gaps = 8/260 (3%)

Query: 22  APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
           + NK+IEE YQKKSQ+EHILLRPDTYIGS+E HTQ LWI+ +E   M+ + I+YVPGLYK
Sbjct: 2   SKNKSIEERYQKKSQIEHILLRPDTYIGSVEMHTQLLWIWNKERNRMVQKNITYVPGLYK 61

Query: 82  IFDEILVNAADNKQRDPK-----MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVP 136
           IFDEI+VNAAD K R+ +     M  +K+ I++E   ISV+N G+G+PVEIH+E  +YVP
Sbjct: 62  IFDEIIVNAADVKAREKEKSENPMTCIKIEINKEQKKISVYNDGEGIPVEIHKEMNIYVP 121

Query: 137 ELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
            +IFG LLTS NYDD   + TGGRNG+GAKLTNIFS EF+++  D  R K++K V+T+NM
Sbjct: 122 HMIFGELLTSDNYDDAEDRITGGRNGFGAKLTNIFSKEFVVQCGDSSRKKEFKMVWTDNM 181

Query: 197 GKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVE 256
            K SEP I K   G ++ +V+FKPDLAKF MT ++DD+ +L+ KRV DLAG    SV+V 
Sbjct: 182 SKFSEP-IIKNYNGKDFVRVTFKPDLAKFGMTEMDDDIESLLCKRVYDLAGTC--SVRVY 238

Query: 257 LNGHRVPVKSFAEYVDMYPK 276
           LNG+R+ +K F  YVD+Y K
Sbjct: 239 LNGNRLAIKDFKSYVDLYLK 258


>gi|730968|sp|P41001.1|TOP2_PLAFK RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
          Length = 1398

 Score =  861 bits (2224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/933 (48%), Positives = 613/933 (65%), Gaps = 48/933 (5%)

Query: 278  VTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK 336
            + + HE+   RWEI V+ S+G QFQQVSFVN I T KGG+HV+Y+  Q+ + +    N K
Sbjct: 321  IVKIHEK-QHRWEIVVSKSDGSQFQQVSFVNSICTTKGGSHVNYIVEQLLSSLSKKANAK 379

Query: 337  NKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTA 395
            NK    +K+ +++NHLWVFVN LI NP FDSQTKETLT +   FGSKC LS++ +  V  
Sbjct: 380  NKGGMEIKSGHIRNHLWVFVNCLIVNPTFDSQTKETLTTKPVKFGSKCILSDKTINNV-L 438

Query: 396  KSGIVETLLSWANFKQSKDLKK----NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILT 451
            KS I+  +L WA  K   +LKK          E + GI KLEDAN AG + S++CTLILT
Sbjct: 439  KSPILSNILLWAQAKAQVELKKKMKAGSSKARERIIGIPKLEDANDAGSKYSQECTLILT 498

Query: 452  EGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK-QG 510
            EGDSAK   +AGLS+VGRD++GVFPL+GKLLNVR+AS  Q+++N EI NI +I+GL    
Sbjct: 499  EGDSAKTSCLAGLSIVGRDKYGVFPLKGKLLNVRDASFKQLMDNKEIQNIFRIMGLDITD 558

Query: 511  VEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLI 570
               +++K LRYG LMIMTDQ                            D+DGSHIKGLLI
Sbjct: 559  KNKDDIKGLRYGSLMIMTDQ----------------------------DYDGSHIKGLLI 590

Query: 571  NFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIK 630
            N IH FWPSLLK   FL EF+TPIVK   K  +  SF+++ +YE WKE+   N   W IK
Sbjct: 591  NMIHKFWPSLLKHKGFLSEFVTPIVKV-QKGSQEYSFFTIAEYEQWKEN--TNLLGWKIK 647

Query: 631  YYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPG 690
            YYKGLGTST +E K+YF +I  HK  F+W  D+DG++I++AFSKK+IE RK WL  F  G
Sbjct: 648  YYKGLGTSTDREFKQYFSDIKNHKIMFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFILG 707

Query: 691  NHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAK 750
            +++D KEK + Y DFVNKELI +S  D +RSIP+++DG KPGQRK+L+  FKRN   E K
Sbjct: 708  SYVDHKEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCFKRNLRNECK 767

Query: 751  VAQFSGYVSEHSAYHH-GEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAAS 809
            VAQ  GY++EHSAYHH GE SL  TI+ MAQ FVGSNNIN L+P GQFG+R +GGKDA++
Sbjct: 768  VAQLVGYIAEHSAYHHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGSRKEGGKDASA 827

Query: 810  ARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSS 869
            ARYIFT+L+  TR +F + DD +L YLNE+GQ+IEP +Y+P+IPT+LVNG EGIGTG+SS
Sbjct: 828  ARYIFTKLASSTRSIFNEYDDPILKYLNEEGQKIEPQYYIPVIPTILVNGCEGIGTGYSS 887

Query: 870  YIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNE 929
            +IPNYN +DI+ N++R +N E + PM PWY+ F G IE          Y   GII +++ 
Sbjct: 888  FIPNYNYKDIIDNIKRYINKEPLIPMVPWYKDFKGRIESNGK----TGYETIGIINKIDN 943

Query: 930  TTLRIKELPIRRWTQDYREFLESII-DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTK 988
             TL I ELPI++WTQDY+EFLE ++ D+    I  +   S    + F + +    + + +
Sbjct: 944  DTLEITELPIKKWTQDYKEFLEELLTDEKHQLILDYIDNSSHEDICFTIKMDPAKLQKAE 1003

Query: 989  QEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENL 1048
            +EGL K FKL +T++T+NM LFD    +++Y T   IL+EF + RL+ YE RK   +  L
Sbjct: 1004 EEGLEKVFKLKSTLTTTNMTLFDPNLKLQRYSTELDILKEFCYQRLKAYENRKSYLISKL 1063

Query: 1049 ELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP--KNSKSIEAVVAGA 1106
            E E   + NK +FIL +VN E++VN +K+  L+ EL +KG+ P+      K  E      
Sbjct: 1064 EKEKRIISNKTKFILAIVNNELIVNKKKKKVLVEELYRKGYDPYKDINKIKKEEIFEQEL 1123

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
             D  +  E+N E++ G+   DYDYLLSM I +LTLEKV+ LL    +   E++ LR  T 
Sbjct: 1124 LDAADNPEDNEEIIAGITVKDYDYLLSMPIFSLTLEKVEDLLTQLKEKERELEILRNITV 1183

Query: 1167 ESLWVKDLDALDMQLDELDKSDARAEEERMKIK 1199
            E++W+KD++ ++  ++     +    EE  K K
Sbjct: 1184 ETMWLKDIEKVEEAIEFQRNVELSNREESNKFK 1216



 Score =  308 bits (788), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 149/258 (57%), Positives = 193/258 (74%), Gaps = 8/258 (3%)

Query: 22  APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
           A NKTIEE YQKKSQ+EHILLRPDTYIGS+E HTQ LW++ +E   M+ + I+YVPGLYK
Sbjct: 2   AKNKTIEERYQKKSQIEHILLRPDTYIGSVEMHTQLLWVWNKEKNRMVQKNITYVPGLYK 61

Query: 82  IFDEILVNAADNKQRDPK-----MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVP 136
           IFDEI+VNAAD K R+ +     M  +K+ I++E+  ISV+N G+G+PV+IH+E  +YVP
Sbjct: 62  IFDEIIVNAADVKAREKEKSENPMTCIKIEINKENKRISVYNDGEGIPVDIHKEMNIYVP 121

Query: 137 ELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
            +IFG LLTS NYDD   + TGGRNG+GAKLTNIFS EFI++  D  R K++K  +++NM
Sbjct: 122 HMIFGELLTSDNYDDAEDRITGGRNGFGAKLTNIFSKEFIVQCGDSSRKKEFKMTWSDNM 181

Query: 197 GKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVE 256
            K SEP+I K   G ++ KV+FKPDL KF MT ++DD+ +L+ KRV DLAG    SV+V 
Sbjct: 182 SKFSEPHI-KNYNGKDYVKVTFKPDLNKFGMTEMDDDIESLLFKRVYDLAGTC--SVRVY 238

Query: 257 LNGHRVPVKSFAEYVDMY 274
           LNG R+ VK F  YVD+Y
Sbjct: 239 LNGQRLAVKDFKSYVDLY 256


>gi|156101890|ref|XP_001616638.1| DNA topoisomerase II [Plasmodium vivax Sal-1]
 gi|148805512|gb|EDL46911.1| DNA topoisomerase II, putative [Plasmodium vivax]
          Length = 1502

 Score =  860 bits (2221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/911 (49%), Positives = 607/911 (66%), Gaps = 47/911 (5%)

Query: 278  VTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK 336
            + + HE+   RWEI V+ ++G QFQQVSFVN I T KGG+HV+Y+  Q+ N +    N K
Sbjct: 332  IVKIHEK-QHRWEIVVSKTDGSQFQQVSFVNSICTTKGGSHVNYIVEQLLNSLSKKANAK 390

Query: 337  NKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTA 395
            NK    +K+ ++KNHLWVFVN LI NP FDSQTKETLT +   FGSKC L+++ +  V  
Sbjct: 391  NKGGMEIKSGHIKNHLWVFVNCLIVNPTFDSQTKETLTTKPVKFGSKCILTDKTINSV-L 449

Query: 396  KSGIVETLLSWANFKQSKDLKK----NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILT 451
            KS I+  +L WA  K   +L+K          E + GI KLEDAN AG + S++CTLILT
Sbjct: 450  KSPILSNILLWAQAKAQVELRKKMKAGSSKARERIIGIPKLEDANDAGSKYSQECTLILT 509

Query: 452  EGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK-QG 510
            EGDSAK   +AGLS+VGRD++GVFPL+GKLLNVR+AS  Q+++N EI NI KI+GL    
Sbjct: 510  EGDSAKTSCLAGLSIVGRDKYGVFPLKGKLLNVRDASFKQLMDNKEIQNIFKIMGLDITD 569

Query: 511  VEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLI 570
                ++K LRYG LMIMTDQ                            D+DGSHIKGLLI
Sbjct: 570  KNKEDIKGLRYGSLMIMTDQ----------------------------DYDGSHIKGLLI 601

Query: 571  NFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIK 630
            N IH FWPSLLK   FL EF+TPIVK   K  +  SF+++ +YE WKES   N   W IK
Sbjct: 602  NMIHKFWPSLLKHKGFLSEFVTPIVKV-QKGNQEHSFFTIAEYEQWKEST--NLVGWKIK 658

Query: 631  YYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPG 690
            YYKGLGTST KE K+YF +I  HK  F+W  D+DG++I++AFSKK+IE RK WL  F  G
Sbjct: 659  YYKGLGTSTDKEFKQYFSDIKNHKIMFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFIIG 718

Query: 691  NHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAK 750
            +++D KEK + Y DFVNKELI +S  D +RSIP+++DG KPGQRK+L+  FKRN   E K
Sbjct: 719  SYVDHKEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCFKRNLKNECK 778

Query: 751  VAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASA 810
            VAQ  GY++EHSAYHHGE SL  TI+ MAQ FVGSNNIN L+P GQFG+R +GGKDA++A
Sbjct: 779  VAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGSRKEGGKDASAA 838

Query: 811  RYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSY 870
            RYIFT+L+  TR +F + DD +L YLNE+GQ+IEP +Y+P+IPT+LVNG EGIGTG+SS+
Sbjct: 839  RYIFTKLASSTRSIFNEYDDPILKYLNEEGQKIEPQYYIPVIPTILVNGCEGIGTGYSSF 898

Query: 871  IPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNET 930
            IPNYN +DI+ N++R +N E + PM PWY+ F G IE          Y   GII ++++ 
Sbjct: 899  IPNYNYKDIIENIKRYINKEPLLPMIPWYKDFKGRIESNGK----TGYETIGIIHKIDDE 954

Query: 931  TLRIKELPIRRWTQDYREFLESII-DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQ 989
            TL I ELPI++WTQDY+EFLE ++ D+    I  +   S    + F + +    M + ++
Sbjct: 955  TLEINELPIKKWTQDYKEFLEELLTDEKHQLIVDYIDNSSHEDICFTIKMDPAKMKKAEE 1014

Query: 990  EGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLE 1049
            EGL K FKL +T++T+NM LFD    +++Y T   IL++F   RL+ YE RK   +  LE
Sbjct: 1015 EGLEKVFKLKSTLTTTNMTLFDPNLKLQRYSTELDILKDFCFHRLKAYENRKSYLISKLE 1074

Query: 1050 LELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP--KNSKSIEAVVAGAT 1107
             E   + NK +FIL +VN E+VV+ +K+  L+ EL +KG+ P+      K  E       
Sbjct: 1075 KEKKIISNKSKFILAIVNNELVVSKKKKKVLVEELYRKGYDPYKDINKIKKEEIFEQELL 1134

Query: 1108 DETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPE 1167
            +  E  E+N E++ G+   DYDYLLSM I +LTLEKV+ LLA   +  +E++ L+  T E
Sbjct: 1135 ESVENPEDNEEIIAGISVKDYDYLLSMPIFSLTLEKVEELLAQHKEKEKELEILKNITVE 1194

Query: 1168 SLWVKDLDALD 1178
            ++W+KD++ ++
Sbjct: 1195 TMWLKDIEKVE 1205



 Score =  308 bits (788), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 147/258 (56%), Positives = 195/258 (75%), Gaps = 8/258 (3%)

Query: 24  NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
           NK+IEE YQKKSQ+EHILLRPDTYIGS+E HTQ LW++ +E   M+ + I+YVPGLYKIF
Sbjct: 4   NKSIEERYQKKSQIEHILLRPDTYIGSVEMHTQLLWVWNKERNRMVQKNITYVPGLYKIF 63

Query: 84  DEILVNAADNKQRDPK-----MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
           DEI+VNAAD K R+ +     M  +K+ I+++   ISV+N G+G+PV+IH+E  +YVP +
Sbjct: 64  DEIIVNAADVKAREKEKSENPMTCIKIEINKDQKKISVYNDGEGIPVDIHKEMNIYVPHM 123

Query: 139 IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
           IFG LLTS NYDD   + TGGRNG+GAKLTNIFS EF+++  D  R K++K V+T+NM +
Sbjct: 124 IFGELLTSDNYDDAEDRITGGRNGFGAKLTNIFSKEFVVQCGDSSRKKEFKMVWTDNMSR 183

Query: 199 KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
            SEP+I K   G ++ KV+FKPDLAKF MT ++DD+ +L+ KRV DLAG    SV+V LN
Sbjct: 184 FSEPHI-KNYNGKDYVKVTFKPDLAKFGMTEMDDDIESLLCKRVYDLAGTC--SVRVYLN 240

Query: 259 GHRVPVKSFAEYVDMYPK 276
           G+R+ +K F  YVD+Y K
Sbjct: 241 GNRLAIKDFKSYVDLYLK 258


>gi|351705039|gb|EHB07958.1| DNA topoisomerase 2-beta [Heterocephalus glaber]
          Length = 1917

 Score =  854 bits (2206), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/910 (50%), Positives = 606/910 (66%), Gaps = 61/910 (6%)

Query: 307  NGIATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFD 365
            NGI    GG HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FD
Sbjct: 657  NGILHKGGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFD 716

Query: 366  SQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTE 424
            SQTKE +TL+  SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K  
Sbjct: 717  SQTKENMTLQPKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYS 775

Query: 425  DVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNV 484
             ++GI KL+DAN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNV
Sbjct: 776  KIKGIPKLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNV 835

Query: 485  REASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLW 541
            REAS  Q++ N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ           
Sbjct: 836  REASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ----------- 884

Query: 542  FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
                             D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN
Sbjct: 885  -----------------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KN 925

Query: 602  GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWED 661
             + LSFYS+P+++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +  
Sbjct: 926  KQELSFYSIPEFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAG 984

Query: 662  DQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKE 709
             +D  AI LAFSKKKI+ RK+WL  F            P   L     K++ Y+DF+NKE
Sbjct: 985  PEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKE 1044

Query: 710  LILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQ 769
            LILFS +D +RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ
Sbjct: 1045 LILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQ 1104

Query: 770  SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
            +L  TI+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  D
Sbjct: 1105 ALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVD 1164

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
            D LL +L +D Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L G
Sbjct: 1165 DNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLEG 1224

Query: 890  EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE- 948
                PM P Y+ F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E 
Sbjct: 1225 LDPHPMLPNYKNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQ 1280

Query: 949  FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTS 1005
             LE ++   D+  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ +
Sbjct: 1281 VLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCN 1340

Query: 1006 NMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGV 1065
            +M LFD  G +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  
Sbjct: 1341 SMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEK 1400

Query: 1066 VNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS 1125
            + G+I + NR + DL+  L Q+G+   P  +       A   +ET+   ++    +G  S
Sbjct: 1401 IQGKITIENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPS 1460

Query: 1126 -IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDEL 1184
              D++Y+L+M++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++EL
Sbjct: 1461 GPDFNYILNMSLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEEL 1517

Query: 1185 DKSDARAEEE 1194
            DK +A+  E+
Sbjct: 1518 DKVEAQERED 1527



 Score =  340 bits (871), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 169/296 (57%), Positives = 215/296 (72%), Gaps = 11/296 (3%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 75  SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 133

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRD  M  +K+ ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 134 ILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 193

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 194 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 252

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
           K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 253 KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 311

Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIK 313
            F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT K
Sbjct: 312 GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTK 367


>gi|392895790|ref|NP_741252.2| Protein R05D3.12, isoform a [Caenorhabditis elegans]
 gi|374095516|sp|P34534.5|TOP2M_CAEEL RecName: Full=Putative DNA topoisomerase 2, mitochondrial; Short=DNA
            topoisomerase II; Flags: Precursor
 gi|351064711|emb|CCD73199.1| Protein R05D3.12, isoform a [Caenorhabditis elegans]
          Length = 1170

 Score =  854 bits (2206), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 494/1177 (41%), Positives = 696/1177 (59%), Gaps = 93/1177 (7%)

Query: 31   YQKKSQLEHILLRPDTYIGSIE-KHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVN 89
            Y+KKS  EH+LLRPDTYIG +  +  Q +W+ + E++ MI + ++Y PGL KIFDEILVN
Sbjct: 47   YEKKSPTEHVLLRPDTYIGGVAMREDQIIWLRDSENRKMIAKEVTYPPGLLKIFDEILVN 106

Query: 90   AADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            AADNK RD  M+ ++V +D+E   ISV N+G G+PVEIH  EG+YVP L+FG+L TSSNY
Sbjct: 107  AADNKARDSSMNRLEVWLDRETARISVWNNGSGLPVEIHPTEGIYVPTLVFGNLFTSSNY 166

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DD+  KT GGRNGYGAKL NIFS EFI+ET D +  ++++Q + +NM K +E  + +  +
Sbjct: 167  DDSEIKTVGGRNGYGAKLCNIFSKEFIVETVDTRIKRRFRQKWYDNMKKCNEAEVVEILD 226

Query: 210  GD--NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSF 267
                ++TKV F PDL +F +  L DDV+ L+ +RV ++A  L + V V LNG +  V  F
Sbjct: 227  ETVKDYTKVEFVPDLERFQIDKLSDDVIDLIGRRVFEVAATLPRDVDVYLNGQKCDVDGF 286

Query: 268  AEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQ--------VSFVNGIATIKGGTHVD 319
             +YV M+  S +        RW + V      F +        VSFVN I T KGG+HVD
Sbjct: 287  EDYVKMFNDSSSLLFLHPTPRWHVGVAKRNNFFGESHVVLPKIVSFVNNINTEKGGSHVD 346

Query: 320  YVANQVANHVMAVVNKK--NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQS 377
            YV +++ N +  +V+ K  +   +VK   +KN+L +F+N LI+NP+F+SQTKETLT +  
Sbjct: 347  YVMDKIVNIIKPIVDSKLGDPTKSVKPAVIKNNLSIFINCLIENPSFESQTKETLTTKAK 406

Query: 378  SFGSKCELSEEFLKKVTAKSGIVETLLSWA-NFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
            +FGS  E   +   +   +SG++E ++    N K+ K   K        VR I KLEDA 
Sbjct: 407  NFGSIFECDAKKTAEWAEQSGLIEDIVEEVLNMKKKKLPGKR--VSVSSVRDIVKLEDAE 464

Query: 437  LAG-GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
             AG    +E+CTLILTEGDSAKALA+AGL V+GR+ +GVFPL+GKLLNV      +   N
Sbjct: 465  WAGITGTAEKCTLILTEGDSAKALALAGLEVLGRETYGVFPLKGKLLNVSNLDDARASKN 524

Query: 496  SEIGNIKKILGLKQGVEYNNV--KSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
             EI N+ +ILGLK   + N++  +SLRYG L+I+ DQ                       
Sbjct: 525  EEISNLLRILGLKFE-DSNSITRESLRYGRLLILADQ----------------------- 560

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
                 D DGSHIKGL++NFIH FWPSL+    F+  F TP++KA  K  KV SF+SM +Y
Sbjct: 561  -----DEDGSHIKGLIVNFIHKFWPSLVHTDGFIQSFRTPLLKA-KKGDKVRSFFSMNEY 614

Query: 614  EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
              W +   G    W IKYYKGLGTSTS E +EYF ++  H  +F +    D +AI +AF 
Sbjct: 615  RKWADVEEG--GKWKIKYYKGLGTSTSNEAREYFSDLDHHTVNFKYTGTTDDDAIRMAFD 672

Query: 674  KKKIEARKKWLLQFEPG-NHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            + K + RK+W+ + E    + D  +  I Y +FV+ +L+ F M DL+RSIPS++DGLKP 
Sbjct: 673  RDKSDERKEWIRRSENEITNEDDGKTEISYQEFVDGQLMQFGMVDLKRSIPSLIDGLKPS 732

Query: 733  QRKILFCSFKR-NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLL 791
            QRKIL+      +   E KV+Q +G V+   +YHHGE+SL  TI+ M Q F GS+N+ LL
Sbjct: 733  QRKILWTLLNNMDESTEIKVSQLAGAVAHRQSYHHGEESLVRTIIRMGQTFCGSSNLPLL 792

Query: 792  QPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPI 851
            QP GQFGTR++GG DAASARYIFT L+P TR LFP+ DD LL    E+G  +EPTW  PI
Sbjct: 793  QPIGQFGTRHEGGNDAASARYIFTALAPTTRLLFPQADDDLLQKNVEEGMVVEPTWLCPI 852

Query: 852  IPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMME-PMHPWYRGFGGTIEKTA 910
            +P +L+NG+EGIGTGWS+ I N NP DI+  +RR ++    E  + P+Y  F G +E   
Sbjct: 853  VPLILINGTEGIGTGWSTKIANRNPIDIIDMIRRKIDSISTEYEIPPFYEEFRGKLEVVT 912

Query: 911  SKEAGVTYTVTGIIEEV-----NETTLRIK--ELPIRRWTQDYREFLESIIDQNDSFIRG 963
              +    +  +G I+ +     N +T  I+  ELPI  WT  Y+E L  I++     +  
Sbjct: 913  PTK----FISSGKIQLIRPERKNASTFSIEIVELPIGIWTSKYKEKLSKIVETLP--VLE 966

Query: 964  FRQYSDDTTVDFEVFLSEESMMRTKQEG---LLKKFKLTTTISTSNMHLFDSKGVIKKYD 1020
            F +   +  V F + L  +   R  Q+    LL  FKL T++ T N  LFD  G +K++ 
Sbjct: 967  FSERHTEKRVHFRITLDRKKSSRFLQKSNSDLLNYFKLRTSL-TENRVLFDRNGELKEFG 1025

Query: 1021 TPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDL 1080
               +I  EFF +R + YEKR K+Q E  E +L+ +EN++ FI  V NG I + +  R  L
Sbjct: 1026 NISEIAAEFFEVRRDLYEKRLKIQKEECEAKLIYVENQLNFIEMVTNGTIEIRSMGRNQL 1085

Query: 1081 LLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLT 1140
              +L++ GF   P  +                      +    +  +Y YLL M +  LT
Sbjct: 1086 EEKLQEMGFRVDPMAT----------------------IAKNSKKANYGYLLEMPVSRLT 1123

Query: 1141 LEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
             ++++ L   + +   E++    A  +S+W  +LD L
Sbjct: 1124 SDEMKRLEERKSRRRTELEAAESADWKSVWRSELDKL 1160


>gi|308483878|ref|XP_003104140.1| hypothetical protein CRE_01053 [Caenorhabditis remanei]
 gi|308258448|gb|EFP02401.1| hypothetical protein CRE_01053 [Caenorhabditis remanei]
          Length = 1165

 Score =  853 bits (2204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/1178 (42%), Positives = 691/1178 (58%), Gaps = 96/1178 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIE-KHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVN 89
            Y+KKS  EH+LLRPDTYIG +  + ++ +W+   ESK M  + +SY PGL KIFDEILVN
Sbjct: 43   YEKKSPTEHVLLRPDTYIGGVAMRESEIVWLRSLESKQMYTKEVSYPPGLLKIFDEILVN 102

Query: 90   AADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            AADNK RD  M+ ++V +D++   ISV N+G G+PVEIH  E +YVP L+FG+L TSSNY
Sbjct: 103  AADNKSRDSNMNRLEVWVDRKTSRISVWNNGGGLPVEIHPSENIYVPTLVFGNLFTSSNY 162

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK- 208
            DD+  KT GGRNGYGAKL NIFSTEFI+ET D +  KK++Q + NNM +  E  I   + 
Sbjct: 163  DDSEIKTVGGRNGYGAKLCNIFSTEFIVETVDSRTKKKFRQRWFNNMKECDEAEIVDLQN 222

Query: 209  -EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSF 267
             +  ++TKV F PDL +F M  L DD++ L+ KR+ ++   L   V+V LNG +  V  F
Sbjct: 223  EKTTDYTKVEFVPDLKRFQMDCLSDDIIDLIGKRIFEVTATLPNDVQVYLNGQKCEVNGF 282

Query: 268  AEYVDMY----PKSVTRFHERVNERWEICVT-----LSEGQF---QQVSFVNGIATIKGG 315
             EYV M+    P S    H     RW + V      + + Q    + VSFVN I T KGG
Sbjct: 283  EEYVRMFNYYDPSSFLFLHP--TSRWHVGVAKRNTYIGDDQLILPKVVSFVNNINTEKGG 340

Query: 316  THVDYVANQVANHVMAVVNKK--NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            THVDYV +++ N +  +V+ +      +VK   +KN+L +F+N LI+NP+F+SQTKET+T
Sbjct: 341  THVDYVMDKIVNVIKPLVDSRLAEFGKSVKPAMIKNNLSIFINCLIENPSFESQTKETVT 400

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA-NFKQSKDLKKNDGTKTEDVRGISKL 432
             +   FGS  +   + + K   +SG VE ++  A N K+ K   K     +  VR I KL
Sbjct: 401  TKPKLFGSSFDCDHKKVTKWAEESGFVEEIVEEALNLKKKKVPAKR--VTSSSVRDIVKL 458

Query: 433  EDANLAG-GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            EDA  AG    SE+CTLILTEGDSAKALA++GL V+GR+ +GVFPL+GKL+NV      +
Sbjct: 459  EDAEWAGISGKSEKCTLILTEGDSAKALALSGLEVLGRETYGVFPLKGKLVNVSNIDDVR 518

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
               N EI N+ +ILGL+   E    +S+RYG L+I+ DQ                     
Sbjct: 519  ASKNEEISNVMRILGLRFEEEAPTQESMRYGRLLILADQ--------------------- 557

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
                   D DGSHIKGL+INFIH FWPSL++   F+  F TP++KA  K  KV SF+S+ 
Sbjct: 558  -------DEDGSHIKGLVINFIHKFWPSLIRSRDFIQSFRTPLLKA-KKGDKVKSFFSIN 609

Query: 612  DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
            +Y+ W E   G    W IKYYKGLGTSTS E KEYF ++  H  +F +    D +AI +A
Sbjct: 610  EYQKWAEETEGK---WKIKYYKGLGTSTSIEAKEYFSDLDHHVINFKYTGLNDDKAIRMA 666

Query: 672  FSKKKIEARKKWLLQFEPGNHL-DQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            F ++K + RK+W+   +    L D  +  + Y +F++ +L+ F M DL+RSIPS++DGLK
Sbjct: 667  FDREKSDERKEWIRGSKRLESLVDDGKTELSYKEFIDGQLMQFGMVDLKRSIPSLIDGLK 726

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            P QRKIL+     +   E KV+Q +G V+   +YHHGE+SL  TI+ M Q F GS+N+ L
Sbjct: 727  PSQRKILWTLLNMDESTEMKVSQLAGAVAHRQSYHHGEESLVRTIIRMGQTFCGSSNLPL 786

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            LQP GQFGTR++GG DAASARYIFT L+  TR LFP  DD L +   E+G  +EP W  P
Sbjct: 787  LQPIGQFGTRHEGGNDAASARYIFTSLASTTRLLFPHADDDLYEKRIEEGLVVEPRWLCP 846

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG-EMMEPMHPWYRGFGGTIEKT 909
            IIP +LVNG+EGIGTGWS+ I N N  D++  +RR ++  E    + P+Y  + G IE  
Sbjct: 847  IIPLILVNGTEGIGTGWSTKIVNRNAIDVIDGIRRKIDSVEGEHEIQPYYEDYRGKIEAV 906

Query: 910  ASKEAGVTYTVTGII-----EEVNETT--LRIKELPIRRWTQDYREFLESIIDQNDSFIR 962
             SK+    +  TG I     E  N +T  + I ELPI  WT  Y+E L  I++     I 
Sbjct: 907  TSKK----FITTGKIHLSRPERKNASTFSIEISELPIEIWTSKYKEKLSKIVENLP--IV 960

Query: 963  GFRQYSDDTTVDFEVFLSEESMMRTKQEG---LLKKFKLTTTISTSNMHLFDSKGVIKKY 1019
             F +   +  V+F + +  +   R  Q+    LL  FKL ++I T N  LFD  G++K+Y
Sbjct: 961  EFSERHTEKRVNFRLTVDRKKAGRFLQKTNSELLNFFKLRSSI-TENRVLFDKNGLLKEY 1019

Query: 1020 DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTD 1079
             +  +I  EFF +R + YEKR K Q +  E +L  ++N+++FI  V NG I + +  R  
Sbjct: 1020 KSISEIASEFFDVRRDLYEKRLKAQKDECEAKLKYVDNQIKFIDLVTNGTIDLRSMGRDQ 1079

Query: 1080 LLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            L   L + G    P +SK+                      +  +  DY YLL M +  L
Sbjct: 1080 LESSLEEYGLESDPLSSKT----------------------HNAKKSDYSYLLEMPLSRL 1117

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            T +++  L   R +   ++D    A   S W  +LD +
Sbjct: 1118 TSDEMNRLTERRFRRKTDLDAAESADWRSTWHSELDKV 1155


>gi|341896211|gb|EGT52146.1| hypothetical protein CAEBREN_13599 [Caenorhabditis brenneri]
          Length = 1168

 Score =  847 bits (2188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/1217 (41%), Positives = 710/1217 (58%), Gaps = 107/1217 (8%)

Query: 5    KRLPL--TTSNNANVVGPT------APNKTIEE----MYQKKSQLEHILLRPDTYIGSIE 52
            +RL +  T+S  A VV P       AP+ +        Y+KKS  EH+LLRPDTYIG + 
Sbjct: 8    RRLAIAATSSKTAVVVRPIRRFCSHAPSTSFASEAAAKYEKKSPTEHVLLRPDTYIGGVA 67

Query: 53   -KHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEH 111
             +  + +WI    S+ +  + ++Y PGL KIFDEILVNAADNK RDP M+ ++V +D+E 
Sbjct: 68   MREIETVWIKTPGSRRISPKEVTYPPGLLKIFDEILVNAADNKSRDPTMNRLEVWLDRET 127

Query: 112  DLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIF 171
              ISV N+G G+PVEIH  EG+YVP L+FG+L TSSNY+DN  KT GGRNGYGAKL NIF
Sbjct: 128  SRISVWNNGGGLPVEIHPTEGIYVPTLVFGNLFTSSNYNDNEIKTVGGRNGYGAKLCNIF 187

Query: 172  STEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD--NWTKVSFKPDLAKFNMTH 229
            S EFI+ET D K  ++++Q + NNM +  E  + K  + +  ++TKV F PDL +F + H
Sbjct: 188  SKEFIVETVDTKTKRRFRQRWYNNMKECDEAVVEKFTDENITDYTKVEFVPDLQRFQIQH 247

Query: 230  LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY----PKSVTRFHERV 285
            L DD+V L+ KRV ++A  L  +V V LNG +  V  F +YV M+    P S    H   
Sbjct: 248  LADDIVDLIGKRVFEVAATLPPNVDVFLNGQKCDVDGFEDYVKMFNDSDPSSFLFLHP-- 305

Query: 286  NERWEICVT-----LSEGQFQQV------SFVNGIATIKGGTHVDYVANQVANHVMAVVN 334
              RW + V        E    QV      SFVN I T KGG+HVDYV +++ N +   ++
Sbjct: 306  TSRWHVGVAKRNFFTGENNENQVTLPKVMSFVNNINTEKGGSHVDYVMDKIVNILKPHID 365

Query: 335  KKNKNA--NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKK 392
             K K +  +VK   VKN+L +F+N LI+NP+F+SQTKET+T +  +FGS  +     L  
Sbjct: 366  AKLKESGKSVKPAIVKNNLSLFINCLIENPSFESQTKETVTTKPKNFGSTFDCDTRKLAN 425

Query: 393  VTAKSG----IVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN-SEQCT 447
               +SG    IV+ +LS  N K +  LK N  T    VR I KLEDA  AG    +++CT
Sbjct: 426  WAEESGLIDSIVDEVLSAKNKKPASKLK-NSATS---VRDIVKLEDAEWAGTPGKADKCT 481

Query: 448  LILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGL 507
            LILTEGDSAKALA+AGL V+GR+ +GVFPL+GKLLNV      +V  N EI N+ +ILGL
Sbjct: 482  LILTEGDSAKALALAGLEVLGRETYGVFPLKGKLLNVSNLDEIRVSKNEEISNLIRILGL 541

Query: 508  KQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKG 567
                +       RYG L+I+ DQ                            D DGSHIKG
Sbjct: 542  --SFDDPEPSFTRYGRLLILADQ----------------------------DEDGSHIKG 571

Query: 568  LLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSW 627
            L+INFIH FWPSL+    F+  F TP++KA  K  +V SF+SM +Y  W E+  G    W
Sbjct: 572  LVINFIHKFWPSLIHSGDFIQSFRTPLLKA-KKGDEVKSFFSMNEYRKWSETAEGK---W 627

Query: 628  SIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQF 687
             +KYYKGLGTSTS E +EYF ++  H  +F +   +D EAI + F ++K + RK+W+ + 
Sbjct: 628  KVKYYKGLGTSTSNEAREYFSDLDHHTVNFKYTGPEDDEAIRMVFDREKTDERKEWIRKS 687

Query: 688  EPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIK 747
            E     D  +  I Y +FV+ +L+ F M DL+RSIPS++DGLKP QRKIL+     +   
Sbjct: 688  ENSLEEDTDKTEISYEEFVDGQLMQFGMVDLKRSIPSLIDGLKPSQRKILWTLLNMDEST 747

Query: 748  EAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDA 807
            E KV+Q +G V+   +YHHGE SL  TI+ M Q F G++N+ LLQP GQFGTR++GG DA
Sbjct: 748  EMKVSQLAGAVAHRQSYHHGEDSLVRTIIRMGQTFCGASNLPLLQPIGQFGTRHEGGNDA 807

Query: 808  ASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGW 867
            ASARYIFT L+P TR LFP+ DD LL+   E+G  +EP W  PIIP +LVNG+EGIGTGW
Sbjct: 808  ASARYIFTSLAPTTRLLFPRADDDLLEKKVEEGIVVEPNWLCPIIPLILVNGTEGIGTGW 867

Query: 868  SSYIPNYNPRDIVANVRRLLN-GEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            S+ I N    D++  +RR ++  E+ + + P+Y  + G IE     +   +  V  I  E
Sbjct: 868  STKIANRKTIDVIDLIRRKIDFDELTDEIPPFYDDYKGRIEVVTPTKFFSSGRVQLIRPE 927

Query: 927  ---VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEES 983
                +  ++ I ELPI  WT  Y+E L  I+ +N   I  F +   +  V F + +  + 
Sbjct: 928  RKNASTFSIDITELPIGVWTSKYKEKLSRIV-ENLPVIE-FSEKHTEKRVHFRLTIDRKK 985

Query: 984  MMRTKQEG---LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKR 1040
              R  Q+    LL  FKL T+I T N  LFD  G ++++++  +I +EFF +R E YE+R
Sbjct: 986  ASRFLQKSNSDLLNYFKLQTSI-TENRVLFDKNGKLREFESISEIAKEFFEVRSELYERR 1044

Query: 1041 KKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIE 1100
             ++Q E    +L  +EN+++FI  V NG I +   +R +L  +L + GF   P  SKS  
Sbjct: 1045 LQIQKEECAAKLKYVENQMKFIDLVTNGTIELRAMERDELEAKLEEYGFEIDPLASKS-- 1102

Query: 1101 AVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDD 1160
                     T+  ++           DY+YLL M +  LT +++  L   + +   E++ 
Sbjct: 1103 --------RTKTGKKT----------DYNYLLEMPLSRLTSDEMSRLSERKTRRKNELET 1144

Query: 1161 LRKATPESLWVKDLDAL 1177
               A  +S W  +LD L
Sbjct: 1145 AESADWKSTWHSELDRL 1161


>gi|322510575|gb|ADX05889.1| putative DNA gyrase/DNA topoisomerase IV subunit A [Organic Lake
            phycodnavirus 1]
          Length = 1083

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/1156 (42%), Positives = 691/1156 (59%), Gaps = 92/1156 (7%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQKK+  EHIL  PDTYIGSIE     ++++EE   T  H  + Y PGL+K+FDE +VN 
Sbjct: 7    YQKKTDKEHILDNPDTYIGSIENINGPMYVFEEGKITSKH--MDYNPGLFKLFDEGIVNC 64

Query: 91   ADN-------KQRDPKMDAVKVV-IDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
             D+       K+ +P ++ V ++ I+   D+I++ N+G+G+ VE H    V++PEL+FGH
Sbjct: 65   RDHVVRMIQQKETNPAVNLVNMINIEISDDMITMTNNGNGIDVEKHPTYDVWIPELVFGH 124

Query: 143  LLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP 202
            L TS+NY+ + +K TGG+NG+G KL  I+ST  +IET D  R  KY Q F  N+     P
Sbjct: 125  LRTSTNYNKDEEKITGGKNGFGFKLVLIWSTYGMIETVDHVRKLKYTQTFEQNLDIIHPP 184

Query: 203  NISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
             I+KC +   +T V FKPD  +  +  L  D+++L  +RV D+AG   K VKV+LN + +
Sbjct: 185  TITKCSK-QPYTIVKFKPDYKRLGLNGLSQDMISLFHRRVYDIAGITTKDVKVKLNSNVL 243

Query: 263  PVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVA 322
             VK+F  Y+++Y     +  E  NERW   V LSE +F+QVSFVNGI T KGG HVDY+ 
Sbjct: 244  DVKTFNHYIELYNDQ-DKISEAPNERWSYSVCLSE-EFKQVSFVNGIFTGKGGKHVDYIT 301

Query: 323  NQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSK 382
             Q+   ++A + KK K     +  +K  +++F+N  I NP+FDSQTK+ L    S FGS 
Sbjct: 302  QQIIKKLIAYIEKKKKIEIKPSI-LKEQMYIFLNCTIVNPSFDSQTKDYLNTPPSKFGSS 360

Query: 383  CELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
            C +S++F++K+ AK GI+E     +  K+  + KK DG K +++RGI KL DAN AG ++
Sbjct: 361  CVVSDKFIEKL-AKLGIMEQSCELSKIKEKNNSKKTDGNKQKNIRGIPKLVDANYAGTKD 419

Query: 443  SEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIK 502
            S+ CTLIL EGDSAKA  ++GLS   R+ +GV+P++GKLLNVR  ++ ++  N EI  IK
Sbjct: 420  SKLCTLILCEGDSAKAGILSGLSPNDRNIYGVYPMKGKLLNVRGEATKKINENKEIIEIK 479

Query: 503  KILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDG 562
            KI+GL+   +Y N   LRY  ++ MTDQ                            D DG
Sbjct: 480  KIMGLESNKKYKNTDELRYNKILFMTDQ----------------------------DLDG 511

Query: 563  SHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGG 622
            SHIKGL IN     W SLL I  FL    TPI+KA+    K   FY+  +YE WK+    
Sbjct: 512  SHIKGLCINLFECLWSSLLDISGFLGFMNTPILKASKGTHKK-QFYNEQEYELWKKE-NN 569

Query: 623  NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
                W+IKYYKGLGTSTSKE KEYF++    K   +   +QD E I++ F+KKK E RK+
Sbjct: 570  EGKGWAIKYYKGLGTSTSKEFKEYFKD---KKTMDILLGEQDTEKIDMVFNKKKSEHRKE 626

Query: 683  WLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
            WL  +     LD  +  I   DFV+KE+I FS  D  RSIP+++DGLK  QRKIL+ +FK
Sbjct: 627  WLSTYNRDGVLDTNQLQISVCDFVDKEMIHFSKYDCDRSIPNLMDGLKVSQRKILYSAFK 686

Query: 743  RNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQ 802
            +N + E KVAQFSGYVSEHS YHHGE SL   I+ MAQ FVGSNNIN+L PNGQFGTR Q
Sbjct: 687  KNLVSEIKVAQFSGYVSEHSGYHHGESSLNGAIVNMAQTFVGSNNINVLMPNGQFGTRLQ 746

Query: 803  GGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEG 862
            GGKD+AS RYIFT+L+ ITR +F K+DD +L+YLN+DG  +EP +Y PI+P +LVNG++G
Sbjct: 747  GGKDSASERYIFTQLNKITRMIFKKEDDVILNYLNDDGTPVEPVFYAPILPMILVNGTKG 806

Query: 863  IGTGWSSYIPNYNPRDIVANV-RRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVT 921
            IGTG+S+ IP +NP++++  + ++L +   +    P+Y+ F GTIEK  S+       +T
Sbjct: 807  IGTGFSTDIPCFNPKELIDYILKKLEDPNHIRDFIPYYKHFTGTIEKEDSRRF-----IT 861

Query: 922  GIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSE 981
                 +   T+ I ELPI  W +DY   LE  I  N   ++ +   S D+ + F++ L E
Sbjct: 862  KGKYSIQNKTIIITELPIGVWNEDYITHLEKCIVDNK--LKDYSDQSTDSVIYFKLTLKE 919

Query: 982  ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRK 1041
                   +E +LK FKLTTT+S +NM+LFD    +  Y+   +I ++F  +RL +YEKRK
Sbjct: 920  ----NMDEEAILKTFKLTTTLSINNMNLFDPFDKLVHYNEVHEICDDFIQVRLGYYEKRK 975

Query: 1042 KVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEA 1101
               ++ L  E+  L NK ++I  ++N              L+LR+K       NS+ +E 
Sbjct: 976  LYLVKMLSEEMNILSNKCKYINELLNDT------------LDLRKKS------NSQMVEL 1017

Query: 1102 VVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDL 1161
            +     D   +S              Y YL+ M + ++  E V  L     K  + +D+L
Sbjct: 1018 LQQKKYDTLNDS--------------YHYLIKMPMDSVCKENVDTLNEQFKKKKDLLDEL 1063

Query: 1162 RKATPESLWVKDLDAL 1177
             K +   LW K+L  L
Sbjct: 1064 NKTSNVDLWKKELSEL 1079


>gi|301605654|ref|XP_002932456.1| PREDICTED: DNA topoisomerase 2-beta [Xenopus (Silurana) tropicalis]
          Length = 1557

 Score =  842 bits (2176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/908 (49%), Positives = 607/908 (66%), Gaps = 61/908 (6%)

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            I +  GG HVDYV +Q+ + ++ VV KKNK   +VK   VKNH+WVFVN LI+NP FDSQ
Sbjct: 239  IKSYCGGRHVDYVVDQIVSKLIEVVKKKNKAGVSVKPFQVKNHVWVFVNCLIENPTFDSQ 298

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDV 426
            TKE +TL+   FGSKC+LSE+F  K  +  GIVE++L+W  FK    L KK    K   +
Sbjct: 299  TKENMTLQPKGFGSKCQLSEKF-SKAASNCGIVESILNWVKFKAQTQLNKKCSSVKHSKI 357

Query: 427  RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
            +GI KL+DAN AGG++S  CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVRE
Sbjct: 358  KGIPKLDDANDAGGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVRE 417

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFI 543
            AS  Q++ N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ             
Sbjct: 418  ASHKQIMENAEINNIIKIVGLQYKKSYDDNESLKTLRYGKIMIMTDQ------------- 464

Query: 544  LIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK 603
                           D DGSHIKGLLINF H  WPSLLK  SFL EFITPIVKAT KN +
Sbjct: 465  ---------------DQDGSHIKGLLINFFHHNWPSLLK-HSFLEEFITPIVKAT-KNKQ 507

Query: 604  VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
             LSFYS+P++E WK+    N   W IKYYKGLGTSTSKE KEYF ++  H+  F +   +
Sbjct: 508  ELSFYSIPEFEEWKKQTE-NQKLWKIKYYKGLGTSTSKEAKEYFADMDRHRIIFRYAGPE 566

Query: 664  DGEAIELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELI 711
            D  AI LAFSKKK++ RK+WL  F            P   L     K++ Y+DF+NKELI
Sbjct: 567  DDAAITLAFSKKKVDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELI 626

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            LFS +D +RSIPS+VDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L
Sbjct: 627  LFSNSDNERSIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQAL 686

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
              TI+ +AQ+FVGSNN++LLQP GQFGTR  GGKDAAS RYIFT LSP+ R L+P  DD 
Sbjct: 687  MMTIVNLAQNFVGSNNVSLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARLLYPSVDDN 746

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            LL +L +D Q++EP WY+PIIP VLVNG+EGIGTGW+  +PNY+ R+IV NV+R+L+G  
Sbjct: 747  LLKFLYDDNQRVEPEWYIPIIPLVLVNGAEGIGTGWACKLPNYDTREIVNNVKRMLDGLD 806

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FL 950
              P+ P Y+ F GTI++    +    Y ++G I  ++  T+ I ELP+R WTQ Y+E  L
Sbjct: 807  PYPLLPSYKNFKGTIQELGQNQ----YAMSGEIYVLDRNTIEITELPVRTWTQVYKEQVL 862

Query: 951  ESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
            E ++   ++  S I  +++Y  DTTV F V ++EE + + +  GL K FKL T+++ ++M
Sbjct: 863  EPMLNGTEKTPSLISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSM 922

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVN 1067
             LFD  G +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  +L N+ RF+L  + 
Sbjct: 923  VLFDHMGCLKKYETVQDILKEFFDLRLNYYTLRKEWLIGMLGAEAARLNNQARFVLEKIQ 982

Query: 1068 GEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-I 1126
            G+I + N+ + DL+  L QKGF   P  +       A   D+ ++  E+    +G  S  
Sbjct: 983  GKISIENKTKRDLIQMLVQKGFESDPVKAWKEAQEKATEEDDLQDPNEDNSSDSGTGSGP 1042

Query: 1127 DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
            D++Y+L+M++ +L+ EKV  L+  RD  ++E++DL++ +P  LW +DL A    ++ELD+
Sbjct: 1043 DFNYILNMSLWSLSKEKVDELVRQRDIKSKELNDLKRKSPPDLWKEDLAAF---VEELDR 1099

Query: 1187 SDARAEEE 1194
             +A+ +E+
Sbjct: 1100 VEAQEKED 1107



 Score =  229 bits (584), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 112/185 (60%), Positives = 141/185 (76%), Gaps = 4/185 (2%)

Query: 10  TTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI 69
           T SNN N    ++   ++E +YQKK+QLEHILLRPDTYIGS+E  TQ++W+Y+E+   M 
Sbjct: 34  TESNNKN---DSSKKMSVERVYQKKTQLEHILLRPDTYIGSVETVTQSMWVYDEDV-GMN 89

Query: 70  HRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQ 129
            R I+YVPGLYKIFDEILVNAADNKQRD  M+ +K+ ID + ++IS+ N+G G+PV  H+
Sbjct: 90  CRDITYVPGLYKIFDEILVNAADNKQRDKNMNCIKISIDPDSNIISIWNNGKGIPVVEHK 149

Query: 130 EEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYK 189
            E +YVP LIFG LLTSSNYDD  KK TGGRNGYGAKL NIFST+F +ETA  +    +K
Sbjct: 150 VEKMYVPALIFGQLLTSSNYDDEEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFK 209

Query: 190 QVFTN 194
           QV+ N
Sbjct: 210 QVWMN 214


>gi|66357004|ref|XP_625680.1| DNA topoisomerase II [Cryptosporidium parvum Iowa II]
 gi|46226680|gb|EAK87659.1| DNA topoisomerase II [Cryptosporidium parvum Iowa II]
          Length = 1797

 Score =  841 bits (2173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/1121 (43%), Positives = 654/1121 (58%), Gaps = 180/1121 (16%)

Query: 288  RWEICVTLSEG-QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAH 345
            +WEI ++ S+G QFQ VSFVN I TIKGGTH+ YV + + N ++  V  KNK   +VK++
Sbjct: 416  KWEIVISESDGGQFQHVSFVNSICTIKGGTHISYVLDPLINAILKKVQTKNKGGMDVKSN 475

Query: 346  NVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLS 405
            +VKNH+W+F+  LI NP+FDSQTKETLT + S FGS C LSE+ +  V  KS IVE +L 
Sbjct: 476  HVKNHIWIFIKCLIVNPSFDSQTKETLTTKVSKFGSVCTLSEKTINSV-VKSSIVENVLM 534

Query: 406  WANFKQSKDLKK-----NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALA 460
            WA  KQS +LKK        T T  + GI KLEDAN AGG +S++CTLILTEGDSAK   
Sbjct: 535  WAQLKQSMELKKKMKSNQKNTVTSRLLGIPKLEDANEAGGPHSKKCTLILTEGDSAKTSC 594

Query: 461  MAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVK-SL 519
            +AGLS+VGRD FGVFPLRGKLLNVREAS  Q + N EI NI KILGL  G +Y+N   +L
Sbjct: 595  LAGLSIVGRDYFGVFPLRGKLLNVREASFKQQIGNVEIQNILKILGLGIGQKYDNGPVNL 654

Query: 520  RYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPS 579
            RYG LM+MTDQ                            DHDGSHIKGL+IN IH +WPS
Sbjct: 655  RYGSLMLMTDQ----------------------------DHDGSHIKGLIINLIHYYWPS 686

Query: 580  LLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTST 639
            L+    FL +F+TPIVKA  K    +SF+++ +YE W+++   N + W  KYYKGLGTST
Sbjct: 687  LIHFRGFLKQFVTPIVKAK-KGSNEISFFTLYEYEQWRKNNSSNLNGWRFKYYKGLGTST 745

Query: 640  SKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLD----Q 695
              E KEYF  I  H  +F W DDQD EAI++AFSKK+ E RK W+  ++ G ++D     
Sbjct: 746  DLEFKEYFTKIENHSIEFDWMDDQDDEAIDMAFSKKRTEDRKNWIESYKEGTYVDYSINN 805

Query: 696  KEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFS 755
            + + ++Y DF++KEL+LFS  D  RSIP+++DGLKPGQRK+LF +FK+    E KVAQ +
Sbjct: 806  QCRNLRYFDFIHKELVLFSRYDTTRSIPNLLDGLKPGQRKVLFATFKKKLNNELKVAQLA 865

Query: 756  GYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFT 815
            GYV+EHSAYHHGE SL STI+ MAQ+FVGSNN+NLL+P GQFG+R +GGKDA++ARYIFT
Sbjct: 866  GYVAEHSAYHHGESSLQSTIVNMAQNFVGSNNLNLLEPCGQFGSRKEGGKDASAARYIFT 925

Query: 816  RLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYN 875
            +LS  TR++FP+ DD LL YL +DGQQIEP +Y+PIIP +LVNG++GIGTGWSS +PNYN
Sbjct: 926  KLSKWTRYIFPEADDPLLTYLYDDGQQIEPLYYVPIIPMILVNGTDGIGTGWSSSVPNYN 985

Query: 876  PRDIVANVRRLLNGEMMEPMHPWYRGFGGTI--------EKTASKEAG------------ 915
            P+DI+ N++R+L GEMM PM PWY+ F G I        + +AS   G            
Sbjct: 986  PKDIIMNLKRMLKGEMMVPMTPWYKSFKGKIFPIKQKSKKNSASNGGGNNNRKKTAINSF 1045

Query: 916  --------------------------VTYTVTGIIEEV----------------NETTLR 933
                                            GIIEE                 NE TL 
Sbjct: 1046 NNGSNSSILIGSQVDAEDDDLQQIQRTNNMGNGIIEETLELGANYETFGNWYKKNEETLV 1105

Query: 934  IKELPIRRWTQDYREFLESII---------DQNDSFIRGFRQYSDDTTVDFEVFLSEESM 984
            I ELP+RRWTQDY+E+LES +         +  +S+I  +R  S   +V   V +  E +
Sbjct: 1106 ITELPVRRWTQDYKEWLESTLLPAPNADNDNIENSWIIDYRDNSSHESVHITVRMRPEKL 1165

Query: 985  MRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQ 1044
             + + EG+ K F+L +T+STSNM LFD    I +Y+T   IL+EF  IRLE YEKRK   
Sbjct: 1166 QQAEMEGIEKIFRLKSTLSTSNMTLFDHNSRIVRYETELDILKEFIPIRLEMYEKRKNYL 1225

Query: 1045 LENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVA 1104
            L  L  E   LE K+ F+  V+ G I ++N+ +  L+ +L++       +  +  + V  
Sbjct: 1226 LSKLNYEKCLLEQKILFLKLVIQGVIGLSNKSKETLVSDLKKNNIKSIKQVQELTQWVGV 1285

Query: 1105 GATDETEESEE------NPEVVN-GVQSIDY----------------------------- 1128
            G ++  + S        NP  V+ G  S+DY                             
Sbjct: 1286 GGSNLAQNSISGSGIGGNPSFVDSGDNSMDYINFEMNSFDYLESSQQDGILESTSYSRET 1345

Query: 1129 ---------DYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
                     DYLLSM + +LT EK++ L AD  K  EE + L K + E +W  +LD L  
Sbjct: 1346 NKGNELKLFDYLLSMPLWSLTKEKMELLEADLIKKTEEYEKLLKTSIEEIWNTELDELLK 1405

Query: 1180 QLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNA---RATEAMG 1236
             ++E +  D   E E   +           I  +R   +   + KK   A   R  E   
Sbjct: 1406 VIEEEETQDELIEAEHNSL-----------IQKRRLSVDWNDSKKKKTGASRKRKNETTK 1454

Query: 1237 EMDNVTKVVKPKGRAGLKKAPAE-----KLDD-DEEDEVPD 1271
            + +++ KV  P+ ++ LKK  A+     ++DD DEED+  D
Sbjct: 1455 KQESL-KVKNPQ-KSNLKKTSAKPTKKSRIDDSDEEDDYID 1493



 Score =  299 bits (765), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 145/263 (55%), Positives = 190/263 (72%), Gaps = 12/263 (4%)

Query: 25  KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
           KT+EE YQKK+Q+EHILLRPDTYIGS E H QALW++++ +  M+++TI+YVPGLYKIFD
Sbjct: 31  KTVEERYQKKTQIEHILLRPDTYIGSTEFHEQALWVWDDSNMKMVYKTINYVPGLYKIFD 90

Query: 85  EILVNAADNKQRD---------PKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYV 135
           EILVNAAD K R+          K   +KV I++E   I+V N G+G+P+EIH+E  VYV
Sbjct: 91  EILVNAADVKAREISTKNNHIFEKCTCIKVEINREKKEITVFNDGEGIPIEIHREHQVYV 150

Query: 136 PELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNN 195
           PELIFGHLLTS NYDDN  + TGGRNG+GAKLTNIFS EF +E  D    + +K  + +N
Sbjct: 151 PELIFGHLLTSDNYDDNEDRVTGGRNGFGAKLTNIFSKEFKVECGDNNTGRIFKMTWYDN 210

Query: 196 MGKKSEPNISKCKEGDNWTKVSFKPDLAKF-NMTHLEDDVVALMKKRVVDLAGCLGKSVK 254
           M KKSE NI +   G ++ K++FKPDL++F NM   +DD+++L+ KRV D++G  G  VK
Sbjct: 211 MSKKSEENIKENYSGKSYVKITFKPDLSRFGNMKDFDDDIISLLNKRVYDISGTSG--VK 268

Query: 255 VELNGHRVPVKSFAEYVDMYPKS 277
           V LNG  +P+K F  Y  +Y KS
Sbjct: 269 VYLNGSLIPIKDFKSYTLLYLKS 291


>gi|310831536|ref|YP_003970179.1| putative DNA topoisomerase IIA [Cafeteria roenbergensis virus BV-PW1]
          Length = 1101

 Score =  840 bits (2169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/1154 (39%), Positives = 709/1154 (61%), Gaps = 95/1154 (8%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y K SQ EHILLRP  YIGS+ K+T+ +W+YE+    M  + I+++PGLYKI+DEI+VNA
Sbjct: 6    YDKVSQREHILLRPGMYIGSVSKNTEPMWLYEDNK--MQKKDITFIPGLYKIYDEIIVNA 63

Query: 91   ADNKQRDPKMDAVKVVIDQEHDLISVHNSGD-GVPVEIHQEEGVYVPELIFGHLLTSSNY 149
             D+   D   +++++ ++ +    SV+N+GD G+PV+ H+     +P +IFG LLTSSNY
Sbjct: 64   RDHSINDKSCNSIEIEVNTDEGYFSVYNNGDEGIPVKEHETHKTLIPSMIFGELLTSSNY 123

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DD+ K+TTGG NG G+K +N++S +F IE  D    K + Q++ +NM   ++P ++  K 
Sbjct: 124  DDSKKRTTGGMNGLGSKCSNVWSKKFEIEVQDKTNKKHFHQIWEDNMSVVNKPKVT-SKS 182

Query: 210  GDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAE 269
              ++ KV+  PDL +F +  L+  +  L +KR  DLA    K VKV+ NG  + VK+  +
Sbjct: 183  TKSFVKVTCYPDLERFKIKSLKKHL-PLFEKRAYDLALTTEK-VKVKFNGSLINVKNMQD 240

Query: 270  YVDMYPKSVTRFHERVNERWEI-CVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANH 328
            ++D+Y     +  +  N R  + C+ L +   + +S+VNGI + +GGTH +Y+ + V   
Sbjct: 241  FMDLYFPDTAKIVDTSNPRMHVGCIYLPDVGHESISYVNGICSYRGGTHCNYIVDMV--- 297

Query: 329  VMAVVNKKNKNANVKAHN----VKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE 384
            V +++N   K  +         +K++L  F+N++IDNP+F SQ+KETLT + S FG+  +
Sbjct: 298  VKSLINDYIKKKDKDIKISPALIKDNLVFFINSVIDNPSFSSQSKETLTTKPSDFGTVYK 357

Query: 385  LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSE 444
            L++ F+ K+ +KSGI++ ++S A FK+S  + K DG KT  +RGI KLEDAN AG +++ 
Sbjct: 358  LNKTFMTKL-SKSGIIKQIISLAKFKESVKMTKTDGRKTTVIRGIPKLEDANKAGTKDAH 416

Query: 445  QCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKI 504
            +C L L EGDSA ++ ++GLS   R+ +G FPL+GKLLNVREAS  Q++ N EI N+KKI
Sbjct: 417  KCGLYLAEGDSALSMILSGLSSKDRNFYGAFPLKGKLLNVREASVKQIMGNDEISNLKKI 476

Query: 505  LGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHD 561
            LGL+   +Y       +LRYG ++I+ D                             D D
Sbjct: 477  LGLRNEFKYEMDEEFNTLRYGKVIILCDS----------------------------DVD 508

Query: 562  GSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLG 621
            GSHIKGL++N  HS WP+LLK   F+    TPIVKAT K  ++L FY++ DY+ W+    
Sbjct: 509  GSHIKGLILNMFHSMWPNLLKREGFITTMNTPIVKAT-KGKEILKFYNLTDYDNWRND-- 565

Query: 622  GNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD--------GEAIELAFS 673
             N   + IKYYKGLGTS SKE KEYFQ+I     D+ W+ ++          +AIELAFS
Sbjct: 566  NNTKGYYIKYYKGLGTSDSKEAKEYFQDIEGSLIDYTWDTNKSKTKGKTVSDDAIELAFS 625

Query: 674  KKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQ 733
            K+  + RK+WL+ ++    ++  ++ I   DF+NK+LI FS  D QRSIPS+VDG KP Q
Sbjct: 626  KELADKRKEWLINYDKNLTINSNDRQIPVPDFINKDLIHFSNDDTQRSIPSLVDGFKPSQ 685

Query: 734  RKILFCSFKRNFIK-EAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            RKI + +  R   K + KVAQ +G+VS+  AYHHGE SL   I+GMAQ+FVGSNN+NLL+
Sbjct: 686  RKIFYGANLRGLEKDQVKVAQLAGFVSDRVAYHHGEASLMGAIIGMAQNFVGSNNVNLLE 745

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P GQFG+R  GGKD+AS RYI+T+L  +   +F K+D+ +L+Y+N+DG  +EP +Y+PII
Sbjct: 746  PKGQFGSRVMGGKDSASPRYIWTKLEKVAGLIFRKEDNPILNYINDDGLMVEPEFYLPII 805

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P +LVNG+ GIGTG+S+ IP Y+P++++  +++L+ GE  + +HP+Y  F G ++K  + 
Sbjct: 806  PMILVNGATGIGTGFSTSIPCYHPQELIEVLKKLIKGEKYKKIHPYYHKFEGKLKKLDT- 864

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTT 972
                +Y V+G      +  + ++ELP+  WT +Y++FLE ++D + +F        D+ +
Sbjct: 865  ---TSYQVSGTYHIDKKNNIVVEELPVGEWTTNYKQFLEKMLDTDTNFTN-----YDNNS 916

Query: 973  VDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHI 1032
             D ++ ++ +   +     L +K K+   I+ +N+H +  KG I+K+   ++I+  F+++
Sbjct: 917  TDEKILITLK--FKNIPTKLDEKLKMNKKINLTNLHAYTEKGHIQKFKNIDEIINNFYYV 974

Query: 1033 RLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            RLE Y  RKK  LE  + ++  ++ KV+FI  ++N  +++NN+K+  +  +L  K +   
Sbjct: 975  RLEGYYNRKKYLLEIYKHQMDIMKYKVKFIKEIINKTLIINNKKKLIIEQDLETKKYPKM 1034

Query: 1093 PKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRD 1152
             KN K          DE                I+YDYLL M + +LT EK++ L   + 
Sbjct: 1035 GKNLK----------DE----------------INYDYLLGMNLYSLTKEKIEELEKQKI 1068

Query: 1153 KLNEEVDDLRKATP 1166
            +  E   +L+  TP
Sbjct: 1069 EKEEIYTNLKNKTP 1082


>gi|301109930|ref|XP_002904045.1| DNA topoisomerase 2 [Phytophthora infestans T30-4]
 gi|262096171|gb|EEY54223.1| DNA topoisomerase 2 [Phytophthora infestans T30-4]
          Length = 807

 Score =  835 bits (2157), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/814 (52%), Positives = 553/814 (67%), Gaps = 56/814 (6%)

Query: 295  LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVF 354
            +SE  FQQ+SFVNGI T KGG HV Y+ +Q+   ++ V+ KKNK   VK + +KNH++V+
Sbjct: 1    MSEDGFQQMSFVNGICTTKGGQHVSYIVDQITAKLVGVLKKKNKGEAVKPNYIKNHMFVY 60

Query: 355  VNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKD 414
            V+ALIDNPAFDSQTKETLT R +SFGS   LS++FLK++  KSG+VE +L  A       
Sbjct: 61   VSALIDNPAFDSQTKETLTTRANSFGSTFNLSDKFLKQL-EKSGLVEKILLAAT------ 113

Query: 415  LKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGV 474
             +     K   + GI KL+DAN AG   S+ CTLILTEGDSAK +A+ GL+VVGRD +GV
Sbjct: 114  -QGGSSGKRSRLTGIPKLDDANHAGTAKSKDCTLILTEGDSAKTVAVGGLAVVGRDYYGV 172

Query: 475  FPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLA 534
            FPLRGK+LNVREAS +Q+L N EI N+ KILGLK G +Y + K LRYGHLMIM DQ    
Sbjct: 173  FPLRGKMLNVREASHSQILKNEEIQNVVKILGLKYGQKYESTKGLRYGHLMIMADQ---- 228

Query: 535  PLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPI 594
                                    DHDGSHIKGL+IN IH FWPSLL +  FL EFITPI
Sbjct: 229  ------------------------DHDGSHIKGLVINLIHHFWPSLLVVDGFLQEFITPI 264

Query: 595  VKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHK 654
            VK T    K + FY+MP+YEAW+E        W IK+YKGLGTST  E KEY  ++  H+
Sbjct: 265  VKCTKGRTKEV-FYTMPEYEAWRERTN-QGRGWIIKFYKGLGTSTDAETKEYLSDLQTHQ 322

Query: 655  KDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQK------EKYIKYSDFVNK 708
              F ++ D D + I++AFSKK++E RK WL  +EPG ++D         +Y   + FVNK
Sbjct: 323  IRFTYDGDGDADVIDMAFSKKRVEDRKDWLRGYEPGTYVDYDVDEMGYPEYAYRAGFVNK 382

Query: 709  ELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGE 768
            ELILFSMAD  RSIPS+    KP QRK+LFC FKRN   E KVAQ +GYVSEHSAYHHGE
Sbjct: 383  ELILFSMADNIRSIPSVR--FKPSQRKVLFCCFKRNLRAELKVAQLAGYVSEHSAYHHGE 440

Query: 769  QSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKD 828
             SL   I+ MAQDFVGSNNI+LL P GQFG+R  GGKDAASARYIFT L  +TR ++   
Sbjct: 441  ASLQGCIVNMAQDFVGSNNIHLLPPIGQFGSRLMGGKDAASARYIFTNLEQLTRLIYHPL 500

Query: 829  DDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN 888
            D+  L YL+EDGQ IEP WY+PIIP VLVNGS+GIGTGWS   PNYNP DI+  +R+++N
Sbjct: 501  DNDCLKYLSEDGQSIEPEWYIPIIPMVLVNGSDGIGTGWS---PNYNPLDIIKGLRQMIN 557

Query: 889  GEMMEPMHPWYRGFGGTIEKTASKEAGVT--YTVTGIIEEVNETTLRIKELPIRRWTQDY 946
            GE + P+ PWYR F G I + A+     T  Y V G+ E  +++TL + ELP++ WTQ Y
Sbjct: 558  GEEIAPLTPWYREFTGHIVEKANSRGTDTGNYIVQGLYEVTDDSTLVVSELPVKSWTQTY 617

Query: 947  REFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQE--GLLKKFKLTTTIST 1004
            ++FLE ++D     I+ F++   D  V F + + ++++    +   G++KKFKL +++ST
Sbjct: 618  KQFLEGLLDAGT--IKDFKENHTDVKVLFTITMEQKALSDVTKAPGGIVKKFKLESSLST 675

Query: 1005 SNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILG 1064
            SNMHLFD+ G IKKY+ P++I+ EF+ IRLE+Y +RKK  L+ L+ ++  L NK RF+L 
Sbjct: 676  SNMHLFDAAGHIKKYENPKEIMAEFYGIRLEYYGRRKKAMLQKLQDQIKLLSNKARFVLA 735

Query: 1065 VVNGEIVVNNRKRTDLLLELRQKGFTPF-PKNSK 1097
            VV G++VVNNRK+ +LL EL  +G+    PK  K
Sbjct: 736  VVEGKLVVNNRKKQELLEELMAEGYDQIVPKTKK 769


>gi|441432261|ref|YP_007354303.1| DNA topoisomerase 2 [Acanthamoeba polyphaga moumouvirus]
 gi|440383341|gb|AGC01867.1| DNA topoisomerase 2 [Acanthamoeba polyphaga moumouvirus]
          Length = 1253

 Score =  833 bits (2151), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/1269 (40%), Positives = 724/1269 (57%), Gaps = 161/1269 (12%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK----TMIHRTISYVPGLYKIFDEI 86
            YQKK+  EHIL  PDTYIGSIE  T  +W+Y E++K     +I++ I+YVPGLYKI+DE+
Sbjct: 17   YQKKNLHEHILHSPDTYIGSIEDKTCHMWVYNEKAKDGDAQIIYKEITYVPGLYKIYDEV 76

Query: 87   LVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
            LVNAAD+  R    + +KV I+Q+   I+V N+GDG+ V  H+E  + VP +IFG LLTS
Sbjct: 77   LVNAADHNNRCSTCNTIKVNIEQDTGKITVWNNGDGIDVVEHKEHKILVPSMIFGELLTS 136

Query: 147  SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            +NYD N KKT GG+NG+G+KL NI+STEF IET D KR KK+ Q FT+NM  K +P ++ 
Sbjct: 137  TNYDKNEKKTVGGKNGFGSKLANIYSTEFHIETVDTKRGKKFYQKFTDNMYNKEKPKVTN 196

Query: 207  CKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
             K    +TK++F PD  KF +  L DD++AL KKRV DLA  +  + K+  N   +P  +
Sbjct: 197  IKTKTPYTKITFVPDYKKFGLKGLSDDILALFKKRVYDLA--MTTTAKIFYNDKPIPQNN 254

Query: 267  FAEYVDMYPKSVTRFHERV----NERWEICVTL---SEGQFQQVSFVNGIATIKGGTHVD 319
            F +Y+D+Y    T  H++V      RW++C       + + Q +SFVN I T +GGTHVD
Sbjct: 255  FNKYIDLYFPEGTG-HKKVLDISQNRWKVCAVYDPTDQLEHQNISFVNSICTSRGGTHVD 313

Query: 320  YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
             V NQV  ++   V KK K   VK   +K +L  F+++ I+NP FD+QTKE LT + ++F
Sbjct: 314  QVVNQVVKNLKEAVAKKVKGLQVKPTMIKENLIFFIDSTIENPDFDTQTKEYLTTKPTNF 373

Query: 380  GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG 439
            GS    +++F+KKV  K+G+V  +++ A  K    L K DG     VR   KL +A+ AG
Sbjct: 374  GSNFVATDDFIKKVI-KTGVVSQIIANAQAKAEASLSKTDGKGKGPVR-YEKLYNAHKAG 431

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
             +   +CTLILTEGDSAKA AM+GL+VVGRD +G+FPL+GK LNVR  S   V +N EI 
Sbjct: 432  TKEGYKCTLILTEGDSAKAFAMSGLNVVGRDYYGIFPLKGKPLNVRTKSPAIVASNEEIT 491

Query: 500  NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
             IKKI+GL+QG  YN++K LRYG +MI+ D                            QD
Sbjct: 492  AIKKIVGLEQGKVYNDLKELRYGSIMILAD----------------------------QD 523

Query: 560  HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT---NKNGKVLSFYSMPDYEAW 616
             DG HIKGL++N IH FWPSL K   F+  F TP++KA+    KN +V+ F +   +E W
Sbjct: 524  VDGYHIKGLIMNLIHRFWPSLAKYEGFIQSFATPLLKASKGKGKNREVIEFTNPQSFEEW 583

Query: 617  KESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE---------- 666
            K S   +   W+IKYYKGLGTST+ E +E F ++   +  + WE  +  E          
Sbjct: 584  K-SKNNDGKGWTIKYYKGLGTSTAAEAQECFTDLDKKRIRYFWESRKISEENNSTENKKS 642

Query: 667  ------------------------------AIELAFSKKKIEARKKWLLQFEPGNHLDQK 696
                                          AI LAF KK+ + RK W+  + P N++D  
Sbjct: 643  KKKVKSDFIEEESDTISDIYKPRCKDLCEDAITLAFDKKREDDRKLWINTYNPNNYIDNS 702

Query: 697  EKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIK-EAKVAQFS 755
            +K + Y DF+++ELI FS+ D  RSIP++ DGLKP QRK+L+ S +    K E KV++  
Sbjct: 703  QKRVSYYDFIHRELISFSVDDNMRSIPNIADGLKPSQRKVLYGSEEEGIYKEEIKVSELQ 762

Query: 756  GYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFT 815
            G VS+ + YHHGEQS+  TI+ MAQ++VGSNNINLL PNGQFGTR  GGKD ASARYIFT
Sbjct: 763  GAVSKRTKYHHGEQSMTETIIKMAQNYVGSNNINLLLPNGQFGTRLSGGKDNASARYIFT 822

Query: 816  RLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYN 875
            +L+ +T+++F + D  +L +  ED + IEP +Y+P+IP +LVNG+EGIGTG+S+ +P  N
Sbjct: 823  QLNQLTKYIFIQHDFDVLQHQFEDNKMIEPVFYVPVIPMILVNGTEGIGTGYSTNVPPCN 882

Query: 876  PRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIK 935
            PRDI  N+ R+LN +    M PWYR F GT+EK  + +    Y      E +   T+ I 
Sbjct: 883  PRDIHENIIRILNDQKPRSMKPWYRHFTGTVEKIDNNK----YISRAKYEIIGNDTIHIT 938

Query: 936  ELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKK 995
            +LPI  WT DY+ FL+++I Q      G  Q ++D         ++ +   TK+ G  K 
Sbjct: 939  DLPIGTWTDDYKAFLDNLISQ------GTLQRAEDKKA------AKLAETETKKTGSKKN 986

Query: 996  FKLTTTISTSNMHLFDSKG----VIKKYDTPEQI---LEEFFHIRLEFYEKRKKVQLENL 1048
             +   + S+  +     K     V KK      I   +E+   IR+ F       +L  L
Sbjct: 987  TRAKNSKSSKYLAKKSQKSATAKVAKKNPVASAIKNYVEDCTEIRVSFTITFHPGKLSQL 1046

Query: 1049 ----ELEL-LKLENKVRFI---LGVVNGEI--------VVNN---------RKRTDLLLE 1083
                EL+  LKL + +R     L   +G+I        ++NN         +KR D LL 
Sbjct: 1047 IKQGELDKGLKLISHIRLSNMHLFNEHGKIKKYNSYTEILNNFIQIRLDLYQKRKDHLLG 1106

Query: 1084 LRQKGFTPFPKNSKSIEAVVAGA-----TDETEESEE---------NPEVVNGVQ-SIDY 1128
              +K         K IE V+ G        ++++ EE          P+ + GV+ +  Y
Sbjct: 1107 KWKKEMDMLKWKVKFIEYVIDGTIIIFKNGKSKKKEEIMNKLEELKFPKFITGVEKNPSY 1166

Query: 1129 DYLLSMAIGTLTLEKVQGL---LADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELD 1185
             Y+ S  +  LTLE+V+ L   LAD+    EE+  L   TP+ +W+++LD     ++  D
Sbjct: 1167 TYITSTGLFNLTLEEVEKLKKQLADK---KEEIATLEAKTPKDIWIEELDLF---IEAYD 1220

Query: 1186 KSDARAEEE 1194
            K +A  + +
Sbjct: 1221 KWEAETDAD 1229


>gi|209879055|ref|XP_002140968.1| DNA gyrase/topoisomerase IV, A subunit family protein
            [Cryptosporidium muris RN66]
 gi|209556574|gb|EEA06619.1| DNA gyrase/topoisomerase IV, A subunit family protein
            [Cryptosporidium muris RN66]
          Length = 1645

 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/978 (45%), Positives = 614/978 (62%), Gaps = 122/978 (12%)

Query: 288  RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHN 346
            +WEI ++ S+GQFQ VSFVN I TI+GGTH+ Y+ + +   ++  V  KNK   ++K H+
Sbjct: 415  KWEIVISESDGQFQHVSFVNSICTIRGGTHISYILDPLIAAILKRVQTKNKGGIDIKNHH 474

Query: 347  VKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSW 406
            VK+H+W+F+  LI NP+FDSQTKETLT + + FGS C+LSE+ +  V  KS IVE +L W
Sbjct: 475  VKSHIWIFIRCLIVNPSFDSQTKETLTTKVAKFGSTCQLSEKTINSV-VKSPIVENVLMW 533

Query: 407  ANFKQSKDLKKNDGTKTED-----VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAM 461
            A  +QS +LKK   T  ++     + GI KLEDAN AGG NS +CTLILTEGDSAK   +
Sbjct: 534  AQMRQSMELKKKMKTNQKNSLSSRLLGIPKLEDANEAGGPNSRKCTLILTEGDSAKTSCL 593

Query: 462  AGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVK-SLR 520
            AGLS+VGRD +GVFPL+GKLLNVREAS  Q + N EI NI KILG+  G +Y N   +LR
Sbjct: 594  AGLSIVGRDYYGVFPLKGKLLNVREASFKQQIGNIEIQNILKILGISIGTKYENGPINLR 653

Query: 521  YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
            YG LM+MTDQ                            DHDGSHIKGL+IN IH +WPSL
Sbjct: 654  YGSLMLMTDQ----------------------------DHDGSHIKGLIINLIHYYWPSL 685

Query: 581  LKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTS 640
            +    FL +F+TPIVKA  K  + LSF+++ +Y+ W++    N   W IKYYKGLGTST 
Sbjct: 686  VHFNGFLKQFVTPIVKAK-KGNQELSFFTLVEYDKWRKE--SNPHGWKIKYYKGLGTSTD 742

Query: 641  KEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKE--- 697
             E KEYF NI  H  +F W +D+D EAI++AFSKK+ E RKKW+  ++ G ++D      
Sbjct: 743  LEFKEYFTNIENHSIEFDWYNDEDDEAIDMAFSKKRTEDRKKWIESYQEGTYIDYSMDNI 802

Query: 698  -KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSG 756
             + ++Y DF++KEL+LFS  D  RSIP+++DGLKPGQRK+L+  FK+    E KVAQ +G
Sbjct: 803  CRSLRYRDFIDKELVLFSRYDTARSIPNVIDGLKPGQRKVLYSVFKKKLNNEMKVAQLAG 862

Query: 757  YVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTR 816
            YV+EHSAYHHGE SL STI+ MAQDFVGSNN+NLLQP GQFG+R +GGKDA++ARYIFT+
Sbjct: 863  YVAEHSAYHHGEASLQSTIVNMAQDFVGSNNLNLLQPCGQFGSRKEGGKDASAARYIFTK 922

Query: 817  LSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNP 876
            LS  TR++FP+ DD LL YL +DGQQIEP +Y+PIIP VLVNG++GIGTGWS  +PNYNP
Sbjct: 923  LSTWTRYIFPEADDPLLIYLQDDGQQIEPLFYVPIIPMVLVNGADGIGTGWSCSVPNYNP 982

Query: 877  RDIVANVRRLLNGEMMEPMHPWYRGFGGTI-------EKTASKEAGVT------------ 917
            +DI+ N++R L G++M PM PWYR F G +        K  SK   +T            
Sbjct: 983  KDIINNLKRALRGDIMMPMTPWYRSFKGKVTPIKQKNRKNLSKRKNLTVKLQDNNIDISH 1042

Query: 918  ------YTVTGIIE-EVNET------------------------------TLRIKELPIR 940
                  +T+TG  + E++E                               TL I ELP+R
Sbjct: 1043 NNGTVSHTITGCSQSELDEDHVILTIDPDDNLELGANYETFGNWYRKDDETLIITELPVR 1102

Query: 941  RWTQDYREFLESII----------DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQE 990
            RWTQDY+E+LES +          D + S+I  +R  S   +V   + +  +  ++ + E
Sbjct: 1103 RWTQDYKEWLESTLLPPLNTPEGDDIDHSWIMDYRDNSSHDSVHITIRIKPDKFIQAENE 1162

Query: 991  GLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLEL 1050
            G+ K FKL +T+STSNM LFD+   I +Y+T   IL+EF   RL+ YEKRK+  L  L  
Sbjct: 1163 GIEKVFKLKSTLSTSNMTLFDNNSHIVRYETELDILKEFIPTRLQMYEKRKRYLLSKLNY 1222

Query: 1051 ELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-----------KNSKSI 1099
            E + LE K+ F+  V+   + ++N+ R+ L+ EL++                  KN  ++
Sbjct: 1223 ERVILEQKILFLNLVIEDRMKISNKSRSILVQELKKNNLKSLKDIQLLTEWNNFKNVVTV 1282

Query: 1100 EAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVD 1159
            + + +   D    +E+ P V + ++  ++DYLLS+ + +LT E+++ L  + +K   E +
Sbjct: 1283 DQLESNNLDVDCNNEQIPCVDDEIK--EFDYLLSLPLWSLTTERMELLKDELNKKIAEYN 1340

Query: 1160 DLRKATPESLWVKDLDAL 1177
            +L+K + E LW K+LD L
Sbjct: 1341 NLKKTSIEDLWNKELDEL 1358



 Score =  296 bits (759), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 150/272 (55%), Positives = 194/272 (71%), Gaps = 12/272 (4%)

Query: 13  NNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRT 72
           NN  V+   A  KT+EE YQKK+Q+EHILLRPDTYIGSIE H Q+LW+++E +  M+++ 
Sbjct: 13  NNGKVMKKRA--KTVEERYQKKTQIEHILLRPDTYIGSIEYHEQSLWVWDEINNKMVYKL 70

Query: 73  ISYVPGLYKIFDEILVNAADNKQRDPKM------DAVKVVIDQEHDLISVHNSGDGVPVE 126
           I+YVPGLYKIFDEILVNAAD K R+  M        +KV I + +  IS+ N GDG+PVE
Sbjct: 71  INYVPGLYKIFDEILVNAADVKAREISMINNERCTCIKVDISKSNKRISIFNDGDGIPVE 130

Query: 127 IHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLK 186
           IH+E GVYVPELIFGHLLTS NYDDN  + TGGRNG+GAKLTNIFSTEF +E AD    +
Sbjct: 131 IHKEYGVYVPELIFGHLLTSDNYDDNEDRVTGGRNGFGAKLTNIFSTEFCVECADSNSCR 190

Query: 187 KYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKF-NMTHLEDDVVALMKKRVVDL 245
            +K  + +NM KK++  ++    G ++ K+SFKPDL +F NM   + D+++L+ KRV D+
Sbjct: 191 LFKMTWFDNMSKKTDAIVTN-YNGKSYVKISFKPDLDRFANMREFDGDILSLLYKRVYDI 249

Query: 246 AGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS 277
           AG  G  VKV LNG  +P+K F  Y  +Y KS
Sbjct: 250 AGTSG--VKVYLNGSLLPIKDFKSYTLLYLKS 279


>gi|10281012|dbj|BAB13747.1| type II DNA topoisomerase [Kluyveromyces marxianus]
          Length = 777

 Score =  831 bits (2146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/810 (52%), Positives = 549/810 (67%), Gaps = 60/810 (7%)

Query: 65  SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
           +  MI +T++ VPGL+KIFDEILVNAADNK RDP M  + V I+QE +LI V N G G+P
Sbjct: 1   TDCMIEKTVNIVPGLFKIFDEILVNAADNKVRDPSMKKIDVTINQEENLIEVRNDGKGIP 60

Query: 125 VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
           VEIH++EG+Y+PE+IFGHLLTSSNYDD+ KK TGGRNGYGAK+ NIFSTEFI+ETAD  +
Sbjct: 61  VEIHEKEGIYIPEMIFGHLLTSSNYDDDEKKVTGGRNGYGAKVCNIFSTEFILETADPSK 120

Query: 185 LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
            +KY Q + NNM     P+I+  K G ++TKVSF+ DL +FNM  L+DD+V +M++RV D
Sbjct: 121 GQKYVQKWENNMSVCHPPSITSYKRGPSYTKVSFRADLQRFNMEKLDDDIVGVMRRRVYD 180

Query: 245 LAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR------------------------ 280
           + G + + V V LNG  + +K+F  YV++Y KS+ +                        
Sbjct: 181 INGSV-RDVNVSLNGKPLKIKNFKNYVELYLKSLEKIKLNRLQELTNPDEPAQEPTNIPA 239

Query: 281 -FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN 339
             +E++N+RWEI   +SE  FQQ+SFVN IAT  GGTHV+YV +Q+   V   + K+ K 
Sbjct: 240 ILYEKINDRWEIAFAVSENSFQQISFVNSIATTSGGTHVNYVTDQIVKKVSDRLKKQKK- 298

Query: 340 ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGI 399
            ++K   +KN++++F+N LI+NPAF SQTKE LT R   FGSKCE+  +F+ KV  K+ +
Sbjct: 299 -SIKPFQIKNNMFIFINCLIENPAFTSQTKEQLTTRVKDFGSKCEVPNDFVNKV-MKTDL 356

Query: 400 VETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKAL 459
              +   A+    K LKK DG++   +    KLEDAN AG +   +CTL+LTEGDSA +L
Sbjct: 357 ATRIFDIADENAEKQLKKTDGSRKNRITEYPKLEDANKAGTKEGYKCTLVLTEGDSALSL 416

Query: 460 AMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSL 519
           A+AGL+VVGRD +G FPLRGK+LNVR+A+ +Q+  N+EI  IKKI+GL+    Y +  SL
Sbjct: 417 AVAGLAVVGRDYYGCFPLRGKMLNVRDATPDQITKNAEIQAIKKIMGLQHKKRYEDATSL 476

Query: 520 RYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPS 579
           RYGH+ IMTD                            QDHDGSHIKGL+INF+ S +P 
Sbjct: 477 RYGHITIMTD----------------------------QDHDGSHIKGLIINFLESSFPG 508

Query: 580 LLKIPSFLVEFITPIVKATNKNGK--VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGT 637
           LL IP FL+EFITPI+K T    K   +SFY+MPDYE W+E    +  +W  KYYKGLGT
Sbjct: 509 LLDIPGFLIEFITPIIKITITRPKKQTISFYNMPDYEKWREE-ESHKYTWKQKYYKGLGT 567

Query: 638 STSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKE 697
           ST +E +EYF  + LH K F      D + I+LAFSKKK + RK+WL  +EPG  LD K 
Sbjct: 568 STQQEAREYFSQLDLHLKKFHALQGDDCQLIDLAFSKKKADDRKEWLKLYEPGTVLDPKL 627

Query: 698 KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
             I  SDF+NKELILFS+AD  RSIPS++DGLKPGQRK+++  FKRN   E KVAQ  GY
Sbjct: 628 TEIPISDFINKELILFSLADNIRSIPSVLDGLKPGQRKVIYACFKRNLKSEIKVAQLGGY 687

Query: 758 VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
           VSEH+ YHHGE SL  TI+G+AQDFVGSNNI LL+PNG FGTR  GGKD+A+ RYIFT L
Sbjct: 688 VSEHTGYHHGEPSLYQTIVGLAQDFVGSNNIYLLKPNGAFGTRATGGKDSAAPRYIFTEL 747

Query: 818 SPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
           + ITR +F   DD LL Y+ +D Q +EP W
Sbjct: 748 NKITRKIFNSLDDPLLTYIQDDEQTVEPEW 777


>gi|630594|pir||S44861 DNA topoisomerase II - Caenorhabditis elegans
          Length = 2434

 Score =  824 bits (2128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/1178 (41%), Positives = 697/1178 (59%), Gaps = 91/1178 (7%)

Query: 35   SQLEHILLRPDTYIGSIE-KHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADN 93
            S  EH+LLRPDTYIG +  +  Q +W+ + E++ MI + ++Y PGL KIFDEILVNAADN
Sbjct: 1303 SPTEHVLLRPDTYIGGVAMREDQIIWLRDSENRKMIAKEVTYPPGLLKIFDEILVNAADN 1362

Query: 94   KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNV 153
            K RD  M+ ++V +D+E   ISV N+G G+PVEIH  EG+YVP L+FG+L TSSNYDD+ 
Sbjct: 1363 KARDSSMNRLEVWLDRETARISVWNNGSGLPVEIHPTEGIYVPTLVFGNLFTSSNYDDSE 1422

Query: 154  KKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD-- 211
             KT GGRNGYGAKL NIFS EFI+ET D +  ++++Q + +NM K +E  + +  +    
Sbjct: 1423 IKTVGGRNGYGAKLCNIFSKEFIVETVDTRIKRRFRQKWYDNMKKCNEAEVVEILDETVK 1482

Query: 212  NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
            ++TKV F PDL +F +  L DDV+ L+ +RV ++A  L + V V LNG +  V  F +YV
Sbjct: 1483 DYTKVEFVPDLERFQIDKLSDDVIDLIGRRVFEVAATLPRDVDVYLNGQKCDVDGFEDYV 1542

Query: 272  DMYPKSVTRFHERVNERWEICVTLSEGQFQQ--------VSFVNGIATIKGGTHVDYVAN 323
             M+  S +        RW + V      F +        VSFVN I T KGG+HVDYV +
Sbjct: 1543 KMFNDSSSLLFLHPTPRWHVGVAKRNNFFGESHVVLPKIVSFVNNINTEKGGSHVDYVMD 1602

Query: 324  QVANHVMAVVNKK--NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS 381
            ++ N +  +V+ K  +   +VK   +KN+L +F+N LI+NP+F+SQTKETLT +  +FGS
Sbjct: 1603 KIVNIIKPIVDSKLGDPTKSVKPAVIKNNLSIFINCLIENPSFESQTKETLTTKAKNFGS 1662

Query: 382  KCELSEEFLKKVTAKSGIVETLLSWA-NFKQSKDLKKNDGTKTEDVRGISKLEDANLAG- 439
              E   +   +   +SG++E ++    N K+ K   K        VR I KLEDA  AG 
Sbjct: 1663 IFECDAKKTAEWAEQSGLIEDIVEEVLNMKKKKLPGKR--VSVSSVRDIVKLEDAEWAGI 1720

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
               +E+CTLILTEGDSAKALA+AGL V+GR+ +GVFPL+GKLLNV      +   N EI 
Sbjct: 1721 TGTAEKCTLILTEGDSAKALALAGLEVLGRETYGVFPLKGKLLNVSNLDDARASKNEEIS 1780

Query: 500  NIKKILGLKQGVEYNNV--KSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLA 557
            N+ +ILGLK   + N++  +SLRYG L+I+ DQ                           
Sbjct: 1781 NLLRILGLKFE-DSNSITRESLRYGRLLILADQ--------------------------- 1812

Query: 558  QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWK 617
             D DGSHIKGL++NFIH FWPSL+    F+  F TP++KA  K  KV SF+SM +Y  W 
Sbjct: 1813 -DEDGSHIKGLIVNFIHKFWPSLVHTDGFIQSFRTPLLKA-KKGDKVRSFFSMNEYRKWA 1870

Query: 618  ESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
            +   G    W IKYYKGLGTSTS E +EYF ++  H  +F +    D +AI +AF + K 
Sbjct: 1871 DVEEG--GKWKIKYYKGLGTSTSNEAREYFSDLDHHTVNFKYTGTTDDDAIRMAFDRDKS 1928

Query: 678  EARKKWLLQFEPG-NHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKI 736
            + RK+W+ + E    + D ++K  + SD V ++L  F    +Q SIPS++DGLKP QRKI
Sbjct: 1929 DERKEWIRRSENEITNEDDEQKKARMSDGV-EDLQRFESQRIQ-SIPSLIDGLKPSQRKI 1986

Query: 737  LFCSFKR-NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNG 795
            L+      +   E KV+Q +G V+   +YHHGE+SL  TI+ M Q F GS+N+ LLQP G
Sbjct: 1987 LWTLLNNMDESTEIKVSQLAGAVAHRQSYHHGEESLVRTIIRMGQTFCGSSNLPLLQPIG 2046

Query: 796  QFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTV 855
            QFGTR++GG DAASARYIFT L+P TR LFP+ DD LL    E+G  +EPT   PI+P +
Sbjct: 2047 QFGTRHEGGNDAASARYIFTALAPTTRLLFPQADDDLLQKNVEEGMVVEPT-LCPIVPLI 2105

Query: 856  LVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMME-PMHPWYRGFGGTIEKTASKEA 914
            L+NG+EGIGTGWS+ I N NP DI+  +RR ++    E  + P+Y  F G +E     + 
Sbjct: 2106 LINGTEGIGTGWSTKIANRNPIDIIDMIRRKIDSISTEYEIPPFYEEFRGKLEVVTPTK- 2164

Query: 915  GVTYTVTGIIEEV-----NETTLRIK--ELPIRRWTQDYREFLESIIDQNDSFIRGFRQY 967
               +  +G I+ +     N +T  I+  ELPI  WT  Y+E L  I++     +  F + 
Sbjct: 2165 ---FISSGKIQLIRPERKNASTFSIEIVELPIGIWTSKYKEKLSKIVETLP--VLEFSER 2219

Query: 968  SDDTTVDFEVFLSEESMMRTKQEG---LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
              +  V F + L  +   R  Q+    LL  FKL T++ T N  LFD  G +K++    +
Sbjct: 2220 HTEKRVHFRITLDRKKSSRFLQKSNSDLLNYFKLRTSL-TENRVLFDRNGELKEFGNISE 2278

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            I  EFF +R + YEKR K+Q E  E +L+ +EN++ FI  V NG I + +  R  L  +L
Sbjct: 2279 IAAEFFEVRRDLYEKRLKIQKEECEAKLIYVENQLNFIEMVTNGTIEIRSMGRNQLEEKL 2338

Query: 1085 RQKGFTPFP-----KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTL 1139
            ++ GF   P     KNSK +  +          + E+ + +N     +Y YLL M +  L
Sbjct: 2339 QEMGFRVDPMATIAKNSKKVNLI----------NYEDFQYLNF--QANYGYLLEMPVSRL 2386

Query: 1140 TLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            T ++++ L   + +   E++    A  +S+W  +LD L
Sbjct: 2387 TSDEMKRLEERKSRRRTELEAAESADWKSVWRSELDKL 2424


>gi|371945085|gb|AEX62906.1| DNA topoisomerase 2 [Moumouvirus Monve]
          Length = 1007

 Score =  818 bits (2113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/981 (44%), Positives = 608/981 (61%), Gaps = 93/981 (9%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK----TMIHRTISYVPGLYKIFDEI 86
           YQKK+  EHIL  PDTYIGSIE  T  +W+Y E++K     +I++ I+YVPGLYKI+DE+
Sbjct: 17  YQKKNLHEHILHSPDTYIGSIEDKTCHMWVYNEKAKDGDAQIIYKEITYVPGLYKIYDEV 76

Query: 87  LVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
           LVNAAD+  R    + +KV I+Q+   I+V N+GDG+ V  H+E  + VP +IFG LLTS
Sbjct: 77  LVNAADHNNRCSTCNTIKVNIEQDTGKITVWNNGDGIDVVEHKEHKILVPSMIFGELLTS 136

Query: 147 SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
           +NYD N KKT GG+NG+G+KL NI+STEF IET D KR KK+ Q FT+NM  K +P ++ 
Sbjct: 137 TNYDKNEKKTVGGKNGFGSKLANIYSTEFHIETVDTKRGKKFYQKFTDNMYNKEKPKVTN 196

Query: 207 CKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
            K    +TK++F PD  KF +  L DD++AL KKRV DLA  +  + K+  N   +P  +
Sbjct: 197 IKTKTPYTKITFVPDYKKFGLKGLSDDILALFKKRVYDLA--MTTTAKIFYNDKPIPQNN 254

Query: 267 FAEYVDMYPKSVTRFHERV----NERWEICVTL---SEGQFQQVSFVNGIATIKGGTHVD 319
           F +Y+D+Y    T  H++V      RW++C       + + Q +SFVN I T +GGTHVD
Sbjct: 255 FNKYIDLYFPEGTG-HKKVLDISQNRWKVCAVYDPTDQLEHQNISFVNSICTSRGGTHVD 313

Query: 320 YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
            V NQV  ++   V KK K   VK   +K +L  F+++ I+NP FD+QTKE LT + ++F
Sbjct: 314 QVVNQVVKNLKEAVAKKVKGLQVKPTMIKENLIFFIDSTIENPDFDTQTKEYLTTKPTNF 373

Query: 380 GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG 439
           GS    +++F+KKV  K+G+V  +++ A  K    L K DG     VR   KL +A+ AG
Sbjct: 374 GSNFVATDDFIKKVI-KTGVVSQIIANAQAKAEASLSKTDGKGKGPVR-YEKLYNAHKAG 431

Query: 440 GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
            +   +CTLILTEGDSAKA AM+GL+VVGRD +G+FPL+GK LNVR  S   V +N EI 
Sbjct: 432 TKEGYKCTLILTEGDSAKAFAMSGLNVVGRDYYGIFPLKGKPLNVRTKSPAIVASNEEIT 491

Query: 500 NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
            IKKI+GL+QG  YN++K LRYG +MI+ D                            QD
Sbjct: 492 AIKKIVGLEQGKVYNDLKELRYGSIMILAD----------------------------QD 523

Query: 560 HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT---NKNGKVLSFYSMPDYEAW 616
            DG HIKGL++N IH FWPSL K   F+  F TP++KA+    KN +V+ F +   +E W
Sbjct: 524 VDGYHIKGLIMNLIHRFWPSLAKYEGFIQSFATPLLKASKGKGKNREVIEFTNPQSFEEW 583

Query: 617 KESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE---------- 666
           K S   +   W+IKYYKGLGTST+ E +E F ++   +  + WE  +  E          
Sbjct: 584 K-SKNNDGKGWTIKYYKGLGTSTAAEAQECFTDLDKKRIRYFWESRKISEENISTENKKS 642

Query: 667 ------------------------------AIELAFSKKKIEARKKWLLQFEPGNHLDQK 696
                                         AI LAF KK+ + RK W+  + P N++D  
Sbjct: 643 KKKVKSDFIEEESDTISDIYKPRCKDLCEDAITLAFDKKREDDRKLWINTYNPNNYIDNS 702

Query: 697 EKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIK-EAKVAQFS 755
           +K + Y DF+++ELI FS+ D  RSIP++ DGLKP QRK+L+ S +    K E KV++  
Sbjct: 703 QKRVSYYDFIHRELISFSVDDNMRSIPNIADGLKPSQRKVLYGSEEEGIYKEEIKVSELQ 762

Query: 756 GYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFT 815
           G VS+ + YHHGEQS+  TI+ MAQ++VGSNNINLL PNGQFGTR  GGKD ASARYIFT
Sbjct: 763 GAVSKRTKYHHGEQSMTETIIKMAQNYVGSNNINLLLPNGQFGTRLSGGKDNASARYIFT 822

Query: 816 RLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYN 875
           +L+ +T+++F + D  +L +  ED + IEP +Y+P+IP +LVNG+EGIGTG+S+ +P  N
Sbjct: 823 QLNQLTKYIFIQHDFDVLQHQFEDNKMIEPVFYVPVIPMILVNGTEGIGTGYSTNVPPCN 882

Query: 876 PRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIK 935
           PRDI  N+ R+LN +    M PWYR F GT+EK  + +    Y      E +   ++ I 
Sbjct: 883 PRDIHENIIRILNDQKPRSMKPWYRHFTGTVEKIDNNK----YITRAKYEIIGNDSIHIT 938

Query: 936 ELPIRRWTQDYREFLESIIDQ 956
           +LPI  WT DY+ FL+++I+Q
Sbjct: 939 DLPIGTWTDDYKAFLDNLINQ 959


>gi|190350975|dbj|BAB13754.2| type II DNA topoisomerase [Pichia guilliermondii]
          Length = 782

 Score =  818 bits (2112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/811 (51%), Positives = 551/811 (67%), Gaps = 61/811 (7%)

Query: 65  SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
           +++MI++ +  VPGLYKIFDEILVNAADNK RDP M  +KV ID E++ ISV N G G+P
Sbjct: 1   TESMIYKEVHIVPGLYKIFDEILVNAADNKIRDPSMRNIKVNIDAENNTISVMNDGKGIP 60

Query: 125 VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
           +EIH++E +Y+PELIFG+LLTSSNYDD+ KK TGGRNGYGAKL NIFSTEF++ETAD   
Sbjct: 61  IEIHKKEKIYIPELIFGNLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFVLETADLNT 120

Query: 185 LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
            + YKQ +TNNM   ++P I+K K    +TKV+FKPDL+KF+M  L+DD+++++++RV D
Sbjct: 121 SQVYKQTWTNNMANLTKPKITKLKSKKEYTKVTFKPDLSKFHMEMLDDDILSVLRRRVYD 180

Query: 245 LAGCLGKSVKVELNGHRVPVKSFAEYVDMY-------------PKSVTR-----FHERVN 286
           L G + K   + LN  ++ +++F  YV+MY             P+  TR      HE  N
Sbjct: 181 LCGTV-KDCNIYLNDKKLSIRNFKSYVEMYVNAIRERSPDPVAPEGETRNYSTIVHEVFN 239

Query: 287 ERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA---NVK 343
           +RWE+   +S+G F QVSFVN IAT  GGTHV YV++Q+   ++  + KK K     N+K
Sbjct: 240 DRWEVAFAVSDGSFNQVSFVNSIATTSGGTHVKYVSDQIITKLIDALTKKEKGKKKLNIK 299

Query: 344 AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS----KCELSEEFLKKVTAKSGI 399
              V+N+++VF+N LI+NPAF SQTKE LT R + FG     K  +S++F+ K+  K+ I
Sbjct: 300 PQEVRNNMFVFINCLIENPAFTSQTKEQLTTRVAQFGGKPSEKIVISDQFIAKI-LKTSI 358

Query: 400 VETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKAL 459
            + + +  N  + K++ K DG++   ++   KL DAN AG +   +CTLILTEGDSA  L
Sbjct: 359 ADKIRTIVNANEDKEMSKADGSRKSRIKNQVKLVDANKAGTKEGYKCTLILTEGDSAMPL 418

Query: 460 AMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVK 517
           A+AGL+VVGRD +G FPLRGKLLNVREAS  QV  N+EI +IK+I+GL+    Y   N+K
Sbjct: 419 AVAGLTVVGRDYYGCFPLRGKLLNVREASIEQVSKNAEINSIKQIMGLQHKKRYTPENIK 478

Query: 518 SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFW 577
           SLRYGH+MIMTD                            QD DGSHIKGL+INF+ + +
Sbjct: 479 SLRYGHIMIMTD----------------------------QDQDGSHIKGLIINFLETSF 510

Query: 578 PSLLKIPSFLVEFITPIVKAT---NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKG 634
           P LL+IP FL+EFITPIVK T     N +V+ FY+MP++E W+E+  G    W  KY+KG
Sbjct: 511 PGLLEIPGFLLEFITPIVKVTITGRGNHRVIPFYNMPEFEKWRET-EGTTCKWKHKYFKG 569

Query: 635 LGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLD 694
           LGTS   EG+EYF  +  H K F    D D + I++AFSKKK + RK WL  F PG HLD
Sbjct: 570 LGTSLESEGREYFAALDRHMKSFHALQDGDSQYIDMAFSKKKADERKDWLQAFRPGTHLD 629

Query: 695 QKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQF 754
            + + I  S+F+NKELILFSMAD  RSIPS++DG KPGQRK+L+  FKRN   E KVAQ 
Sbjct: 630 PQIREIPISEFINKELILFSMADNVRSIPSILDGFKPGQRKVLYGCFKRNLRSEIKVAQL 689

Query: 755 SGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIF 814
            GY+SEH+ YHHGE SLA TI+G+AQ+FVG+NN+NLLQP G FG+R  GGKD ++ RYI 
Sbjct: 690 VGYISEHTGYHHGEGSLAQTIVGLAQNFVGANNLNLLQPIGLFGSRAAGGKDFSAVRYIH 749

Query: 815 TRLSPITRFLFPKDDDKLLDYLNEDGQQIEP 845
           T ++ +TR +F   DD L  Y+ +D Q +EP
Sbjct: 750 TNITDLTRVIFNPLDDDLYTYVQDDAQTVEP 780


>gi|425701284|gb|AFX92446.1| DNA topoisomerase 2 [Megavirus courdo11]
          Length = 1249

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/989 (45%), Positives = 602/989 (60%), Gaps = 94/989 (9%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK----TMIHRTISYVPGLYKI 82
           IEE YQKK+  EHIL  PDTYIGSIE  T  +WIY  + K     +I + ISYVPGLYKI
Sbjct: 13  IEEKYQKKNLHEHILHSPDTYIGSIEDKTCNMWIYNNKFKEGDAQIIFKEISYVPGLYKI 72

Query: 83  FDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
           +DE+LVN+AD+ +R    + +KV I++E   ISV N+GDG+ V  H+E  + VP +IFG 
Sbjct: 73  YDEVLVNSADHSKRCKSCNMIKVDINEESGEISVWNNGDGIDVVEHKEHKIMVPSMIFGE 132

Query: 143 LLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP 202
           LLTS+NYD   KK  GG+NG+GAKL NI+STEF IET D KR KK+ Q FT+NM  K +P
Sbjct: 133 LLTSTNYDKGEKKIVGGKNGFGAKLANIYSTEFHIETIDAKRGKKFYQKFTDNMYTKEKP 192

Query: 203 NISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
            I+  K    +TK+SF PD  KF +  L +D+VAL KKRV DLA  +  + KV  N   +
Sbjct: 193 KITTTKSKTPYTKISFIPDFKKFGLKGLTNDIVALFKKRVYDLA--MTTNAKVYFNEKII 250

Query: 263 PVKSFAEYVDMYPKSVTRFHERV-----NERWEICVTL---SEGQFQQVSFVNGIATIKG 314
              +F +Y+D+Y    +  H++V     ++RW++C       + + Q +SFVN I T +G
Sbjct: 251 SQNNFTKYIDLYFPEGSE-HKKVLDVTTHDRWKVCAVYDPTDQLEHQNISFVNSICTSRG 309

Query: 315 GTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
           GTHVD V NQV   +   V KK K   VK   +K +L  FV+A I NP FD+QTKE LT 
Sbjct: 310 GTHVDQVVNQVVKDLKEAVAKKVKGLQVKPTMIKENLIFFVDATIVNPDFDTQTKEYLTT 369

Query: 375 RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED 434
           + ++FGS   +++ F+KKV  K+G+V  +++ A  K    L K DG     +R   KL +
Sbjct: 370 KPANFGSNFTVTDIFIKKVI-KTGVVSQIIANAQAKAEASLSKTDGKGRGAIR-YEKLYN 427

Query: 435 ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
           A+ AG +   +CTLILTEGDSAK  AM+GL+V+GRD +GVFPL+GK LNVR  S  ++  
Sbjct: 428 AHKAGTKEGYKCTLILTEGDSAKTFAMSGLNVIGRDYYGVFPLKGKPLNVRTKSPLKIAE 487

Query: 495 NSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
           N EI  IKKI+GL+QG  YN++K LRYG +MI+ D                         
Sbjct: 488 NEEITAIKKIIGLEQGKVYNDLKELRYGSIMILAD------------------------- 522

Query: 555 MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG---KVLSFYSMP 611
              QD DG HIKGL++N IH FWPSL K   F+  F TP++KAT   G   KV+ F +  
Sbjct: 523 ---QDVDGYHIKGLIMNLIHRFWPSLAKYEGFIQSFATPLLKATKGKGKTRKVVEFTNPQ 579

Query: 612 DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW---------EDD 662
            +E WK+    +   W+IKYYKGLGTST  E +E F ++   +  + W         ED+
Sbjct: 580 SFEEWKQK-NNDGKGWTIKYYKGLGTSTQAEAQECFTDLDKKRIKYFWESKRVNNIEEDE 638

Query: 663 QDG-------------------------------EAIELAFSKKKIEARKKWLLQFEPGN 691
           ++                                +AI LAF KK+   RK W+  + P N
Sbjct: 639 EESKPKPKVKSEFIDEESDVISEIYKPKNKDICEDAITLAFDKKRENDRKIWVNTYNPNN 698

Query: 692 HLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIK-EAK 750
           ++D  +K + Y DF+++ELI FS+ D  RSIP+++DG KP QRK+ + S +    K E K
Sbjct: 699 YIDNAQKRVSYYDFIHQELISFSVDDNLRSIPNIMDGFKPSQRKVFYGSVEEGIYKEEIK 758

Query: 751 VAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASA 810
           V++  G VS+ + YHHGEQSL STI+ MAQ++VGSNNINLL PNGQFGTR  GGKD+ASA
Sbjct: 759 VSELQGAVSKRTKYHHGEQSLTSTIVNMAQNYVGSNNINLLMPNGQFGTRMSGGKDSASA 818

Query: 811 RYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSY 870
           RYIFT+L  + + +F + D  +L    ED + IEP +Y P+IP +LVNG+EGIGTG+S+ 
Sbjct: 819 RYIFTQLDELAKKIFIEHDFDILHLQYEDNKMIEPQYYAPVIPMILVNGTEGIGTGYSTK 878

Query: 871 IPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNET 930
           I   NPRDI  N+ R+LN E  + M PWYR F GTIEK  + +    Y      E +   
Sbjct: 879 IAPCNPRDIYDNILRILNDEKTKTMKPWYRHFTGTIEKIDNNK----YVSRAKYEIIGND 934

Query: 931 TLRIKELPIRRWTQDYREFLESIIDQNDS 959
           T+ I +LPI  WT +Y+ FL+++IDQ  S
Sbjct: 935 TIHITDLPIGTWTDNYKAFLDNLIDQGAS 963



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 34/223 (15%)

Query: 963  GFRQYSDDTT---VDFEVFLSEESMMRTKQEGLLKK-FKLTTTISTSNMHLFDSKGVIKK 1018
              + Y++D T   + F +      +    + G L    KL + I  +NMHLF+  G IKK
Sbjct: 1024 AIKTYTEDCTQIRISFTINFHPGKLSELIKTGKLDDGLKLVSPIQLTNMHLFNEYGKIKK 1083

Query: 1019 YDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRT 1078
            YD+  +IL  F  +RL+ Y+KRK   L     E+  L+ KV+FI+ V+ G+I++    ++
Sbjct: 1084 YDSYGEILRNFSKVRLDLYQKRKDHLLGKWRKEMDILKWKVKFIMYVIEGKIIIFKNGKS 1143

Query: 1079 DLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQ-SIDYDYLLSMAIG 1137
                E+ QK                        E  E P+ + G + +  Y+Y+ S  + 
Sbjct: 1144 KKKDEIMQK-----------------------LEELEFPKFITGTEKNASYNYITSTGLF 1180

Query: 1138 TLTLEKVQGL---LADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
             LT E+V+ L   LAD+    EEV  L   TP+ +W+++L+  
Sbjct: 1181 NLTHEEVERLKQQLADK---KEEVAILESKTPKDIWIEELEEF 1220


>gi|363540235|ref|YP_004894454.1| mg403 gene product [Megavirus chiliensis]
 gi|350611400|gb|AEQ32844.1| DNA topoisomerase 2 [Megavirus chiliensis]
          Length = 1257

 Score =  812 bits (2097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/989 (45%), Positives = 602/989 (60%), Gaps = 94/989 (9%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK----TMIHRTISYVPGLYKI 82
           IEE YQKK+  EHIL  PDTYIGSIE  T  +WIY  + K     +I + ISYVPGLYKI
Sbjct: 13  IEEKYQKKNLHEHILHSPDTYIGSIEDKTCNMWIYNNKFKEGDAQIIFKEISYVPGLYKI 72

Query: 83  FDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
           +DE+LVN+AD+ +R    + +KV I++E   ISV N+GDG+ V  H+E  + VP +IFG 
Sbjct: 73  YDEVLVNSADHSKRCKSCNMIKVDINEESGEISVWNNGDGIDVVEHKEHKIMVPSMIFGE 132

Query: 143 LLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP 202
           LLTS+NYD   KK  GG+NG+GAKL NI+STEF IET D KR KK+ Q FT+NM  K +P
Sbjct: 133 LLTSTNYDKGEKKIVGGKNGFGAKLANIYSTEFHIETIDAKRGKKFYQKFTDNMYTKEKP 192

Query: 203 NISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
            I+  K    +TK+SF PD  KF +  L +D+VAL KKRV DLA  +  + KV  N   +
Sbjct: 193 KITTTKSKTPYTKISFIPDFKKFGLKGLTNDIVALFKKRVYDLA--MTTNAKVYFNEKII 250

Query: 263 PVKSFAEYVDMYPKSVTRFHERV-----NERWEICVTL---SEGQFQQVSFVNGIATIKG 314
              +F +Y+D+Y    +  H++V     ++RW++C       + + Q +SFVN I T +G
Sbjct: 251 SQNNFTKYIDLYFPEGSE-HKKVLDVTTHDRWKVCAVYDPTDQLEHQNISFVNSICTSRG 309

Query: 315 GTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
           GTHVD V NQV   +   V KK K   VK   +K +L  FV+A I NP FD+QTKE LT 
Sbjct: 310 GTHVDQVVNQVVKDLKEAVAKKVKGLQVKPTMIKENLIFFVDATIVNPDFDTQTKEYLTT 369

Query: 375 RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED 434
           + ++FGS   +++ F+KKV  K+G+V  +++ A  K    L K DG     +R   KL +
Sbjct: 370 KPANFGSNFTVTDIFIKKVI-KTGVVSQIIANAQAKAEASLSKTDGKGRGAIR-YEKLYN 427

Query: 435 ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
           A+ AG +   +CTLILTEGDSAK  AM+GL+V+GRD +GVFPL+GK LNVR  S  ++  
Sbjct: 428 AHKAGTKEGYKCTLILTEGDSAKTFAMSGLNVIGRDYYGVFPLKGKPLNVRTKSPLKIAE 487

Query: 495 NSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
           N EI  IKKI+GL+QG  YN++K LRYG +MI+ D                         
Sbjct: 488 NEEITAIKKIIGLEQGKVYNDLKELRYGSIMILAD------------------------- 522

Query: 555 MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG---KVLSFYSMP 611
              QD DG HIKGL++N IH FWPSL K   F+  F TP++KAT   G   KV+ F +  
Sbjct: 523 ---QDVDGYHIKGLIMNLIHRFWPSLAKYEGFIQSFATPLLKATKGKGKTRKVVEFTNPQ 579

Query: 612 DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW---------EDD 662
            +E WK+    +   W+IKYYKGLGTST  E +E F ++   +  + W         ED+
Sbjct: 580 SFEEWKQK-NNDGKGWTIKYYKGLGTSTQAEAQECFTDLDKKRIKYFWESKRVNNIEEDE 638

Query: 663 QDG-------------------------------EAIELAFSKKKIEARKKWLLQFEPGN 691
           ++                                +AI LAF KK+   RK W+  + P N
Sbjct: 639 EESKPKPKVKSEFIDEESDVISEIYKPKNKDICEDAITLAFDKKRENDRKIWVNTYNPNN 698

Query: 692 HLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIK-EAK 750
           ++D  +K + Y DF+++ELI FS+ D  RSIP+++DG KP QRK+ + S +    K E K
Sbjct: 699 YIDNAQKRVSYYDFIHQELISFSVDDNLRSIPNIMDGFKPSQRKVFYGSVEEGIYKEEIK 758

Query: 751 VAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASA 810
           V++  G VS+ + YHHGEQSL STI+ MAQ++VGSNNINLL PNGQFGTR  GGKD+ASA
Sbjct: 759 VSELQGAVSKRTKYHHGEQSLTSTIVNMAQNYVGSNNINLLMPNGQFGTRMSGGKDSASA 818

Query: 811 RYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSY 870
           RYIFT+L  + + +F + D  +L    ED + IEP +Y P+IP +LVNG+EGIGTG+S+ 
Sbjct: 819 RYIFTQLDELAKKIFIEHDFDILHLQYEDNKMIEPQYYAPVIPMILVNGTEGIGTGYSTK 878

Query: 871 IPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNET 930
           I   NPRDI  N+ R+LN E  + M PWYR F GTIEK  + +    Y      E +   
Sbjct: 879 IAPCNPRDIYDNILRILNDEKTKTMKPWYRHFTGTIEKIDNNK----YVSRAKYEIIGND 934

Query: 931 TLRIKELPIRRWTQDYREFLESIIDQNDS 959
           T+ I +LPI  WT +Y+ FL+++IDQ  S
Sbjct: 935 TIHITDLPIGTWTDNYKAFLDNLIDQGAS 963



 Score = 82.8 bits (203), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 34/223 (15%)

Query: 963  GFRQYSDDTT---VDFEVFLSEESMMRTKQEGLLKK-FKLTTTISTSNMHLFDSKGVIKK 1018
              + Y++D T   + F +      +    + G L    KL + I  +NMHLF+  G IKK
Sbjct: 1024 AIKTYTEDCTQIRISFTINFHPGKLSELIKTGKLDDGLKLVSPIQLTNMHLFNEYGKIKK 1083

Query: 1019 YDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRT 1078
            YD+  +IL  F  +RL+ Y+KRK   L     E+  L+ KV+FI+ V+ G+I++    ++
Sbjct: 1084 YDSYGEILRNFSKVRLDLYQKRKDHLLGKWRKEMDILKWKVKFIMYVIEGKIIIFKNGKS 1143

Query: 1079 DLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQ-SIDYDYLLSMAIG 1137
                E+ QK                        E  E P+ + G + +  Y+Y+ S  + 
Sbjct: 1144 KKKDEIMQK-----------------------LEELEFPKFITGTEKNASYNYITSTGLF 1180

Query: 1138 TLTLEKVQGL---LADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
             LT E+V+ L   LAD+    EEV  L   TP+ +W+++L+  
Sbjct: 1181 NLTHEEVERLKQQLADK---KEEVAILESKTPKDIWIEELEEF 1220


>gi|371943700|gb|AEX61528.1| DNA topoisomerase 2 [Megavirus courdo7]
          Length = 1249

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/989 (45%), Positives = 601/989 (60%), Gaps = 94/989 (9%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK----TMIHRTISYVPGLYKI 82
           IEE YQKK+  EHIL  PDTYIGSIE  T  +WIY  + K     +I + ISYVPGLYKI
Sbjct: 13  IEEKYQKKNLHEHILHSPDTYIGSIEDKTCNMWIYNNKFKEGDAQIIFKEISYVPGLYKI 72

Query: 83  FDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
           +DE+LVN+AD+ +R    + +KV I++E   ISV N+GDG+ V  H+E  + VP +IFG 
Sbjct: 73  YDEVLVNSADHSKRCKSCNMIKVDINEESGEISVWNNGDGIDVVEHKEHKIMVPSMIFGE 132

Query: 143 LLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP 202
           LLTS+NYD   KK  GG+NG+GAKL NI+STEF IET D KR KK+ Q FT+NM  K +P
Sbjct: 133 LLTSTNYDKGEKKIVGGKNGFGAKLANIYSTEFHIETIDAKRGKKFYQKFTDNMYTKEKP 192

Query: 203 NISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
            I+  K    +TK+SF PD  KF +  L +D+VAL KKRV DLA  +  + KV  N   +
Sbjct: 193 KITTTKSKTPYTKISFIPDFKKFGLKGLTNDIVALFKKRVYDLA--MTTNAKVYFNEKII 250

Query: 263 PVKSFAEYVDMYPKSVTRFHERV-----NERWEICVTL---SEGQFQQVSFVNGIATIKG 314
              +F +Y+D+Y    +  H++V     ++RW++C       + + Q +SFVN I T +G
Sbjct: 251 SQNNFTKYIDLYFPEGSE-HKKVLDVTTHDRWKVCAVYDPTDQLEHQNISFVNSICTSRG 309

Query: 315 GTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
           GTHVD V NQV   +   V KK K   VK   +K +L  FV+A I NP FD+QTKE LT 
Sbjct: 310 GTHVDQVVNQVVKDLKEAVAKKVKGLQVKPTMIKENLIFFVDATIVNPDFDTQTKEYLTT 369

Query: 375 RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED 434
           +  +FGS   +++ F+KKV  K+G+V  +++ A  K    L K DG     +R   KL +
Sbjct: 370 KPVNFGSNFTVTDIFIKKVI-KTGVVSQIIANAQAKAEASLSKTDGKGRGAIR-YEKLYN 427

Query: 435 ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
           A+ AG +   +CTLILTEGDSAK  AM+GL+V+GRD +GVFPL+GK LNVR  S  ++  
Sbjct: 428 AHKAGTKEGYKCTLILTEGDSAKTFAMSGLNVIGRDYYGVFPLKGKPLNVRTKSPLKIAE 487

Query: 495 NSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
           N EI  IKKI+GL+QG  YN++K LRYG +MI+ D                         
Sbjct: 488 NEEITAIKKIIGLEQGKVYNDLKELRYGSIMILAD------------------------- 522

Query: 555 MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG---KVLSFYSMP 611
              QD DG HIKGL++N IH FWPSL K   F+  F TP++KAT   G   KV+ F +  
Sbjct: 523 ---QDVDGYHIKGLIMNLIHRFWPSLAKYEGFIQSFATPLLKATKGKGKTRKVVEFTNPQ 579

Query: 612 DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW---------EDD 662
            +E WK+    +   W+IKYYKGLGTST  E +E F ++   +  + W         ED+
Sbjct: 580 SFEEWKQK-NNDGKGWTIKYYKGLGTSTQAEAQECFTDLDKKRIKYFWESKRVNNIEEDE 638

Query: 663 QDG-------------------------------EAIELAFSKKKIEARKKWLLQFEPGN 691
           ++                                +AI LAF KK+   RK W+  + P N
Sbjct: 639 EESKPKPKVKSEFIDEESDVISEIYKPKNKDICEDAITLAFDKKRENDRKIWVNTYNPNN 698

Query: 692 HLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIK-EAK 750
           ++D  +K + Y DF+++ELI FS+ D  RSIP+++DG KP QRK+ + S +    K E K
Sbjct: 699 YIDNAQKRVSYYDFIHQELISFSVDDNLRSIPNIMDGFKPSQRKVFYGSVEEGIYKEEIK 758

Query: 751 VAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASA 810
           V++  G VS+ + YHHGEQSL STI+ MAQ++VGSNNINLL PNGQFGTR  GGKD+ASA
Sbjct: 759 VSELQGAVSKRTKYHHGEQSLTSTIVNMAQNYVGSNNINLLMPNGQFGTRMSGGKDSASA 818

Query: 811 RYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSY 870
           RYIFT+L  + + +F + D  +L    ED + IEP +Y P+IP +LVNG+EGIGTG+S+ 
Sbjct: 819 RYIFTQLDELAKKIFIEHDFDILHLQYEDNKMIEPQYYAPVIPMILVNGTEGIGTGYSTK 878

Query: 871 IPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNET 930
           I   NPRDI  N+ R+LN E  + M PWYR F GTIEK  + +    Y      E +   
Sbjct: 879 IAPCNPRDIYDNILRILNDEKTKTMKPWYRHFTGTIEKIDNNK----YVSRAKYEIIGND 934

Query: 931 TLRIKELPIRRWTQDYREFLESIIDQNDS 959
           T+ I +LPI  WT +Y+ FL+++IDQ  S
Sbjct: 935 TIHITDLPIGTWTDNYKAFLDNLIDQGAS 963



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 34/223 (15%)

Query: 963  GFRQYSDDTT---VDFEVFLSEESMMRTKQEGLLKK-FKLTTTISTSNMHLFDSKGVIKK 1018
              + Y++D T   + F +      +    + G L    KL + I  +NMHLF+  G IKK
Sbjct: 1024 AIKTYTEDCTQIRISFTINFHPGKLSELIKTGKLDDGLKLVSPIQLTNMHLFNEYGKIKK 1083

Query: 1019 YDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRT 1078
            YD+  +IL  F  +RL+ Y+KRK   L     E+  L+ KV+FI+ V+ G+I++    ++
Sbjct: 1084 YDSYGEILRNFSKVRLDLYQKRKDHLLGKWRKEMDILKWKVKFIMYVIEGKIIIFKNGKS 1143

Query: 1079 DLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQ-SIDYDYLLSMAIG 1137
                E+ QK                        E  E P+ + G + +  Y+Y+ S  + 
Sbjct: 1144 KKKDEIMQK-----------------------LEELEFPKFITGTEKNASYNYITSTGLF 1180

Query: 1138 TLTLEKVQGL---LADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
             LT E+V+ L   LAD+    EEV  L   TP+ +W+++L+  
Sbjct: 1181 NLTHEEVERLKQQLADK---KEEVAILESKTPKDIWIEELEEF 1220


>gi|68069037|ref|XP_676429.1| DNA topoisomerase II [Plasmodium berghei strain ANKA]
 gi|56496123|emb|CAH96271.1| DNA topoisomerase II, putative [Plasmodium berghei]
          Length = 1092

 Score =  811 bits (2094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/808 (51%), Positives = 550/808 (68%), Gaps = 46/808 (5%)

Query: 274  YPKSVTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAV 332
            Y + + + HE+   RWEI ++ ++G QFQQVSFVN I T KGGTHV Y+ +Q+ N +   
Sbjct: 323  YEEEIVKIHEK-QHRWEIVISKTDGSQFQQVSFVNSICTTKGGTHVSYIVDQLLNSLSKK 381

Query: 333  VNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLK 391
             N KNK    +K+ +++NHLWVFVN LI NP FDSQTKETLT +QS FGSKC L+++ + 
Sbjct: 382  ANAKNKGGMEIKSGHIRNHLWVFVNCLIVNPTFDSQTKETLTTKQSKFGSKCILTDKTIN 441

Query: 392  KVTAKSGIVETLLSWANFKQSKDLKK----NDGTKTEDVRGISKLEDANLAGGRNSEQCT 447
             V  KS I+  +L WA  K   +L+K          E + GI KLEDAN AG + S++CT
Sbjct: 442  NV-LKSSILSNILLWAQAKAQVELRKKMKAGSSKARERIIGIPKLEDANDAGSKYSQECT 500

Query: 448  LILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGL 507
            LILTEGDSAK   +AGLS+VGRDR+GVFPL+GKLLNVR+AS  Q+++N EI NI KI+GL
Sbjct: 501  LILTEGDSAKTSCLAGLSIVGRDRYGVFPLKGKLLNVRDASFKQLMDNKEIQNIFKIMGL 560

Query: 508  K-QGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
                    ++K LRYG LMI TDQ                            D+DGSHIK
Sbjct: 561  DITDKNKQDIKGLRYGSLMI-TDQ----------------------------DYDGSHIK 591

Query: 567  GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
            GLLIN IH FWPSLLK   FL EF+TPIVK   K  + LSF+++ +YE WKE+   N   
Sbjct: 592  GLLINMIHKFWPSLLKHKGFLCEFVTPIVKV-QKGNQELSFFTIAEYEQWKENT--NLVG 648

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            W IKYYKGLGTST KE K+YF +I  HK  F+W  D+DG++I++AFSKK+IE RK WL  
Sbjct: 649  WKIKYYKGLGTSTDKEFKQYFSDIQSHKIVFLWTGDRDGDSIDMAFSKKRIEDRKLWLQN 708

Query: 687  FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
            F  G+++D KEK + Y DFVNKELI +S  D +RSIP+++DG KPGQRK+L+  FKRN  
Sbjct: 709  FILGSYVDHKEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCFKRNLR 768

Query: 747  KEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKD 806
             E KVAQ  GY++EHSAYHHGE SL  TI+ MAQ FVGSNNIN L+P GQFG+R +GGKD
Sbjct: 769  NECKVAQLVGYIAEHSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGSRKEGGKD 828

Query: 807  AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
            A++ARYIFT+L+  TR +F + DD +L YLNE+GQ+IEP +Y+P+IPT+LVNG EGIGTG
Sbjct: 829  ASAARYIFTKLASSTRSIFNEYDDPILKYLNEEGQKIEPQYYIPVIPTILVNGCEGIGTG 888

Query: 867  WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            +SS+IPNYN +DI+ N+++ ++ E + PM PWY+ F G IE     ++G  Y   GII +
Sbjct: 889  YSSFIPNYNYKDIINNIKKYIDKEPLVPMVPWYKDFKGRIEPNG--KSG--YETIGIINK 944

Query: 927  VNETTLRIKELPIRRWTQDYREFLESII-DQNDSFIRGFRQYSDDTTVDFEVFLSEESMM 985
            +++ TL I ELPI+RWTQDY+EFLE ++ D+ +  I  +   S    V F + +    + 
Sbjct: 945  IDDETLEITELPIKRWTQDYKEFLEELLTDEKNQLIIDYIDNSSHEDVCFTIKMDPTKLK 1004

Query: 986  RTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQL 1045
            R ++EGL K FKL +T++T+NM LFD    +++Y +   IL++F   RL  Y  RK   +
Sbjct: 1005 RAEEEGLEKVFKLKSTLTTTNMTLFDPNLKLQRYASELDILKDFCFHRLNAYTDRKNYLI 1064

Query: 1046 ENLELELLKLENKVRFILGVVNGEIVVN 1073
              LE E   + NK +FIL ++NGE+VVN
Sbjct: 1065 SKLEKEKRIISNKAKFILAIINGELVVN 1092



 Score =  303 bits (776), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 147/258 (56%), Positives = 189/258 (73%), Gaps = 8/258 (3%)

Query: 22  APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
           + NKTIEE YQKKSQ+EHILLRPDTYIGS+E HTQ LWI+ +E   M+ + I+YVPGLYK
Sbjct: 2   SKNKTIEERYQKKSQIEHILLRPDTYIGSVEMHTQLLWIWNKEKNRMVQKNITYVPGLYK 61

Query: 82  IFDEILVNAADNKQRDPK-----MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVP 136
           IFDEI+VNAAD K R+ +     M  +K+ I++E   ISV+N G+G+PV+IH+E  +YVP
Sbjct: 62  IFDEIIVNAADVKAREKEKSENPMTCIKIEINKEQKRISVYNDGEGIPVDIHKEMNIYVP 121

Query: 137 ELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
            +IFG LLTS NYDD   + TGGRNG+GAKLTNIFS EF ++  D  R +++K  ++ NM
Sbjct: 122 HMIFGELLTSDNYDDAEDRITGGRNGFGAKLTNIFSKEFTVQCGDSSRKREFKMTWSQNM 181

Query: 197 GKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVE 256
            K SEP+I K   G ++ KV+FKPDL KF M  L+DD+  L+ KRV DLAG    +V+V 
Sbjct: 182 SKFSEPHI-KNYNGKDYVKVTFKPDLDKFGMAELDDDIECLLHKRVYDLAGTC--NVRVY 238

Query: 257 LNGHRVPVKSFAEYVDMY 274
           LNG R+PVK F  YVD+Y
Sbjct: 239 LNGTRLPVKDFKSYVDLY 256


>gi|183987574|gb|ACC65777.1| topoisomerase II [Lentinus tuber-regium]
          Length = 692

 Score =  809 bits (2090), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/724 (55%), Positives = 514/724 (70%), Gaps = 48/724 (6%)

Query: 160 RNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFK 219
           RNGYGAKL NI+S EF IETAD    KKY Q +T NM +  +  I+K   G+ +T+V+FK
Sbjct: 1   RNGYGAKLANIYSLEFTIETADKINEKKYSQTWTKNMTQVGKAKITKNSRGEEYTRVTFK 60

Query: 220 PDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV- 278
           PDLA+F M+H++ D  +L++KRV DLAG + K VKV LN  R+ VK F +YV+MY  +  
Sbjct: 61  PDLARFGMSHIDTDTASLLRKRVYDLAGTV-KDVKVYLNDERLKVKDFKQYVEMYLDAAA 119

Query: 279 ---------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
                          T  +E+++ RWE+    S+G FQQVSF N I+TIKGGTHV+Y+A+
Sbjct: 120 ADAKENSGGAAQAKPTLIYEQISGRWEVAFATSDGTFQQVSFANSISTIKGGTHVNYIAD 179

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
           Q++ +++A + KKNK A VK   +KNH+W+FVN+LI+NP  DSQTKETLTL  S FGSK 
Sbjct: 180 QLSKNLIAAITKKNKGATVKPAQIKNHMWIFVNSLIENPTSDSQTKETLTLPASKFGSKP 239

Query: 384 ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            LSEEFLKKV  KS I++ +L+WA FK  + +KK DG+K   + G++KL DAN AG + +
Sbjct: 240 TLSEEFLKKVQ-KSSIIDQVLNWAKFKADQQIKKTDGSKRNRLTGMAKLSDANNAGTKQA 298

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
           E+CTLILTEGDSAK+LA+AGL+VVGRD FGVFPLRGKLLNVREA  +Q++ N EI NIKK
Sbjct: 299 EKCTLILTEGDSAKSLAVAGLAVVGRDNFGVFPLRGKLLNVREAKHDQIMKNEEIQNIKK 358

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           I+GL+   EY NV SLRYG LMIMTD                            QDHDGS
Sbjct: 359 IMGLQHNKEYTNVSSLRYGRLMIMTD----------------------------QDHDGS 390

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
           HIKGLLINF+  F+PSLLKIP FLVEF+TPIV+ T  N +  +F+++P+YE W E    +
Sbjct: 391 HIKGLLINFLDHFYPSLLKIPEFLVEFVTPIVRVTKGNQRK-NFFTIPEYEKWLEET-PD 448

Query: 624 ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
           +  W+ KYYKGLGTS+  + +EYF +++ H   F   ++ + E I+LAFSKKK + RK+W
Sbjct: 449 SKKWTAKYYKGLGTSSDADAREYFSHMSKHMIPFATMEEGERELIDLAFSKKKADDRKEW 508

Query: 684 LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
           L  F+PG +LD     I +SDF+NKELILFSMAD  RSIPS+ DGLKPGQRK+++  FKR
Sbjct: 509 LRHFKPGTYLDHNMDEIPFSDFINKELILFSMADNIRSIPSVADGLKPGQRKVVWGCFKR 568

Query: 744 NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
              KE KVAQ  GY+SEH+AYHHGE SLA+TI+ +AQ++VGSNNINLL+PNGQ+GTR+QG
Sbjct: 569 KLKKEIKVAQLVGYISEHAAYHHGEASLAATIINLAQNYVGSNNINLLKPNGQYGTRDQG 628

Query: 804 GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
           GKD AS RYI+T + P+TR +     D LL    +D   +EP WYMP++P VLVNG+EGI
Sbjct: 629 GKDHASPRYIYTEVMPLTRMICHPAGDPLLKRQTDDNLLVEPEWYMPVVPLVLVNGAEGI 688

Query: 864 GTGW 867
           GTGW
Sbjct: 689 GTGW 692


>gi|183987576|gb|ACC65778.1| topoisomerase II [Pleurotus columbinus]
          Length = 692

 Score =  808 bits (2086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/724 (54%), Positives = 512/724 (70%), Gaps = 48/724 (6%)

Query: 160 RNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFK 219
           R+GYGAKL NI+S EF IETAD    KKY Q +T NM +  +  I+K    + +T+V+FK
Sbjct: 1   RHGYGAKLANIYSLEFTIETADKVNGKKYSQTWTKNMTQVGKAKITKNSRNEEYTRVTFK 60

Query: 220 PDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVT 279
           P+L +F MTH++ D   L++KRV D+AG + K VKV LN  R+ +K+F +YV+MY ++ T
Sbjct: 61  PELTRFGMTHIDPDTAGLLRKRVYDMAGTV-KDVKVYLNDERLKIKTFKQYVEMYIEAAT 119

Query: 280 R----------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
                             +E+++ RWE+    S+G FQQVSF N I+TIKGGTHV+Y+A+
Sbjct: 120 AGAKENSGGAAQAKPTVIYEQISPRWEVAFATSDGTFQQVSFANSISTIKGGTHVNYIAD 179

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
           Q++  ++A + KKNK A VK   VKNH+W+FVNALI+NP FDSQTKETLTL    FGS+ 
Sbjct: 180 QLSKSIIAHIAKKNKAATVKPAQVKNHMWIFVNALIENPTFDSQTKETLTLPAGKFGSRP 239

Query: 384 ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            LSEEF+KKV  KS I++ +L+WA FK  + +KK DG+K   + G++KL DAN AG +N+
Sbjct: 240 ALSEEFMKKVQ-KSSIIDQVLNWAKFKADQQIKKTDGSKRNRLTGMAKLSDANNAGTKNA 298

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
           E+CTLILTEGDSAK+LA+AGL+VVGRD FGVFPLRGKLLNVREA  +Q++ N EI NIKK
Sbjct: 299 EKCTLILTEGDSAKSLAVAGLAVVGRDNFGVFPLRGKLLNVREARHDQIMKNEEIQNIKK 358

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           I+GL+   EY NV SLRYG LMIMTD                            QDHDGS
Sbjct: 359 IMGLQHNKEYTNVSSLRYGRLMIMTD----------------------------QDHDGS 390

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
           HIKGLLINF+  F+PSLLK+P FLVEF+TPIV+ T  N +  +F+++P+YE W E    +
Sbjct: 391 HIKGLLINFLDHFYPSLLKVPEFLVEFVTPIVRVTKGNQRK-NFFTIPEYETWLEET-PD 448

Query: 624 ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
           +  W+ KYYKGLGTS+  + +EYF  +  H   F   +D++   I+LAFSKKK + RK+W
Sbjct: 449 SKKWTAKYYKGLGTSSDADAREYFSRMGKHMIPFAIMEDEERALIDLAFSKKKADDRKEW 508

Query: 684 LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
           L QF+PG +LD     I ++DF+NKELILFSMAD  RSIPS+ DGLKPGQRK+++  FKR
Sbjct: 509 LRQFKPGTYLDHNIDEIPFTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCFKR 568

Query: 744 NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
              KE KVAQ  GY+SEH+AYHHGE SL+STI+ +AQ++VGSNNINLL PNGQ+GTR+QG
Sbjct: 569 KLKKEIKVAQLVGYISEHAAYHHGEMSLSSTIVNLAQNYVGSNNINLLSPNGQYGTRDQG 628

Query: 804 GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
           GKD AS RYI+T ++P+TR L    DD LL    +D   +EP WY PIIP VLVNG+EGI
Sbjct: 629 GKDHASPRYIYTEIAPLTRLLCHPSDDPLLKRQTDDNLLVEPEWYSPIIPMVLVNGAEGI 688

Query: 864 GTGW 867
           GTGW
Sbjct: 689 GTGW 692


>gi|10281016|dbj|BAB13749.1| type II DNA topoisomerase [Candida tropicalis]
          Length = 782

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/812 (51%), Positives = 552/812 (67%), Gaps = 59/812 (7%)

Query: 65  SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
           +++M+ + ++ VPGLYKIFDEILVNAADNK RDP M  +KV ID E++ I V N G G+P
Sbjct: 1   TESMVFKEVTIVPGLYKIFDEILVNAADNKIRDPTMKNIKVKIDPENNTIEVMNDGKGIP 60

Query: 125 VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
           VE+H +E +Y+PELIFG+LLTSSNYDDN KK TGGRNG+GAKL NIFST+F +ETAD   
Sbjct: 61  VEMHTKENMYIPELIFGNLLTSSNYDDNQKKVTGGRNGFGAKLCNIFSTQFEVETADLNT 120

Query: 185 LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
            K YKQV+T+NM   ++P I+  +    +TK++FKPDLAKF+M  L++D++A++++RV D
Sbjct: 121 GKLYKQVWTDNMTNVAKPKITTLRTKKEYTKITFKPDLAKFDMDSLDEDLLAVLRRRVYD 180

Query: 245 LAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV------------------TRFHERVN 286
           L G + K+  + LN  R+ + SF  YV+MY K++                  T  HE  N
Sbjct: 181 LCGTV-KNCNIYLNDKRLSISSFKSYVEMYVKAIRERSPEPLTEDGTSKNFTTIVHEVFN 239

Query: 287 ERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VK 343
           ERWE+   +S+G F QVSFVN IAT  GGTHV YV++Q+ N ++  ++KK K      +K
Sbjct: 240 ERWEVAFAVSDGTFNQVSFVNSIATTAGGTHVKYVSDQIINKLVETLSKKEKGKKKLMIK 299

Query: 344 AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE-LSEEFLKKVTAKSGIVET 402
              V++++++F+N LI+NPAF SQTKE LT + S FG K + ++ + L     K+ IV+ 
Sbjct: 300 PQEVRDNMFLFINCLIENPAFTSQTKEQLTTKVSQFGGKQKFVANDNLINRILKTSIVDK 359

Query: 403 LLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMA 462
           + + AN  + K L+K DG++   ++G   L DAN AG +    CTLILTEG SA  LA+A
Sbjct: 360 IRAIANANEDKALQKADGSRKSRIKGQVSLVDANKAGTKLGHNCTLILTEGLSALNLAVA 419

Query: 463 GLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLR 520
           GLSVVGRD +G FPLRGKLLNVREAS++Q+  N+EI  +K+I+GL+    Y   N+K LR
Sbjct: 420 GLSVVGRDYYGCFPLRGKLLNVREASADQISKNAEINALKQIIGLQHKKHYTAENIKQLR 479

Query: 521 YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
           YGH+MIMTD                            QD DGSHIKGL+INF+ + +P L
Sbjct: 480 YGHIMIMTD----------------------------QDQDGSHIKGLIINFLETSFPGL 511

Query: 581 LKIPSFLVEFITPIVKATNK-----NGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGL 635
           L+IP FL+EFITPIVK T K     N +V+ FY+MP++EAW++   G+   W+ KYYKGL
Sbjct: 512 LEIPGFLLEFITPIVKVTIKTRGSGNNRVIPFYTMPEFEAWRDG-EGSQCRWTHKYYKGL 570

Query: 636 GTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQ 695
           GTST  E +EYF  +  H K F     +D   I+LAFSKKK + RK WL  F PG HLD 
Sbjct: 571 GTSTPMEAREYFTALDRHLKKFHALQGEDASYIDLAFSKKKADERKDWLQGFIPGTHLDP 630

Query: 696 KEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFS 755
           +   I  SDF+NKELILFSM+D  RSIPS++DGLKPGQRK+L+   K+    E KVAQ +
Sbjct: 631 EINEIPISDFINKELILFSMSDNIRSIPSVLDGLKPGQRKVLYGCIKKKLKSEIKVAQLA 690

Query: 756 GYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFT 815
           GYVSE++ YHHGEQSL  TI+G+AQ+FVGSNNIN+L+PNG FG+R  GGKD ++ARYIFT
Sbjct: 691 GYVSENTGYHHGEQSLVQTIIGLAQNFVGSNNINILKPNGSFGSRAAGGKDFSAARYIFT 750

Query: 816 RLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
            L+ ITR +F   DD L +Y+ +D Q +EP W
Sbjct: 751 ELNEITRKIFNPLDDPLYNYVQDDEQTVEPEW 782


>gi|10281028|dbj|BAB13755.1| type II DNA topoisomerase [Clavispora lusitaniae]
          Length = 772

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/803 (51%), Positives = 543/803 (67%), Gaps = 51/803 (6%)

Query: 65  SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
           S+ M+ +++  VPGLYKIFDEILVNAADNK RDP M  +KV ID E + I+V N G G+P
Sbjct: 1   SEKMVQKSVKIVPGLYKIFDEILVNAADNKIRDPSMKQLKVNIDVESNTITVRNDGRGIP 60

Query: 125 VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
           VEIH++E +Y+PE+IFG+LLTSSNYDD+ KK TGGRNGYGAKL NIFSTEF +ETAD   
Sbjct: 61  VEIHEKEQMYIPEMIFGNLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFTVETADLSN 120

Query: 185 LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
            K Y+QV+TNNM K + P I K      +T+++FKPDLAKF M  L+DD+V++MK+RV D
Sbjct: 121 GKVYQQVWTNNMSKCNPPKIKKMTAKREYTQITFKPDLAKFGMERLDDDIVSVMKRRVFD 180

Query: 245 LAGCLGKSVKVELNGHRVPVKSFAEYVDMY------------PKSVTRFHERVNERWEIC 292
           L G + +   V LN  ++P+KSF +YVDMY            PKS    HE   +RWE+ 
Sbjct: 181 LCGTV-RDCSVFLNDTKLPIKSFKQYVDMYVQALRQLDDSDDPKSSVVVHENFGDRWEVA 239

Query: 293 VTLSEGQFQQVSFVNGIATIKGGTHV----DYVANQVANHVMAVVNKKNKNANVKAHNVK 348
             +S+G FQQVSFVN IAT  GGTHV    D +  Q+   + A   KK K   VK   VK
Sbjct: 240 FAVSDGSFQQVSFVNSIATTSGGTHVKMLTDSIVKQLTESISAKRGKK-KALMVKPQEVK 298

Query: 349 NHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWAN 408
           N++++FVN L++NPAF SQTKE +T + + FGSK  ++E+F+KK+ AK+ I + L S + 
Sbjct: 299 NNMFLFVNCLVENPAFTSQTKEQMTTKPAKFGSKPVITEDFIKKLIAKTSITDKLHSLSQ 358

Query: 409 FKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVG 468
             + K L + DG++   V+  +KL DAN AG ++  +CTLILTEGDSA A A+ GL VVG
Sbjct: 359 ANEDKALARQDGSRRSRVKS-AKLHDANKAGTKDGHKCTLILTEGDSALAQAVVGLKVVG 417

Query: 469 RDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMI 526
            + +G FPLRGK+LNVR+AS++Q+  N+EI  IKKI+GL+    Y   ++KSLRYGH++I
Sbjct: 418 NEYYGCFPLRGKMLNVRDASADQISKNAEINEIKKIIGLQHKKHYTPESLKSLRYGHILI 477

Query: 527 MTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSF 586
           MTDQ                            DHDGSHIKGLLINF  S +P LL+ P F
Sbjct: 478 MTDQ----------------------------DHDGSHIKGLLINFFESSFPGLLQCPGF 509

Query: 587 LVEFITPIVKAT--NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGK 644
           L  FITPIVK T   ++ KV+ FY+MPD+E W+ES    A+ W+ KYYKGLGTS + E  
Sbjct: 510 LQGFITPIVKVTILGRHKKVIPFYNMPDFERWRESEEAQANRWTHKYYKGLGTSLATEIT 569

Query: 645 EYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSD 704
           EYFQ ++ H K F    D D + I+LAF+KKK + RK WL  + PG  LD + + I  +D
Sbjct: 570 EYFQQLSRHLKRFHALQDDDKQYIDLAFNKKKADDRKDWLGAYIPGTQLDPEIEEIPIAD 629

Query: 705 FVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAY 764
           F+NKELILFSMAD  RS+P ++DGLKP QRK+++   KR   +E KV   +GY+S ++AY
Sbjct: 630 FINKELILFSMADNIRSLPCVLDGLKPAQRKVIYGLQKRAGNREGKVNDLAGYISSNTAY 689

Query: 765 HHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFL 824
           HHG+QSL  TI+ MAQDFVG+NNINLL+P G FG+R  GGKDA++ARYI T LS IT+ +
Sbjct: 690 HHGDQSLVMTIVSMAQDFVGANNINLLEPRGNFGSRFMGGKDASAARYIHTCLSEITKSV 749

Query: 825 FPKDDDKLLDYLNEDGQQIEPTW 847
           +   D+ L  Y+ ED   +EP W
Sbjct: 750 YNPLDNSLYKYVQEDESTVEPQW 772


>gi|10281024|dbj|BAB13753.1| type II DNA topoisomerase [Candida parapsilosis]
          Length = 779

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/810 (51%), Positives = 552/810 (68%), Gaps = 58/810 (7%)

Query: 65  SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
           S++M  + ++ VPGLYKIFDEILVNAADNK RDP M  +KV ID E+++I V N G G+P
Sbjct: 1   SESMKFQEVTIVPGLYKIFDEILVNAADNKIRDPSMKNIKVRIDPENNVIQVFNDGKGIP 60

Query: 125 VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
           VE+H +E +Y+PELIFG+LLTSSNYDD+ KK TGGRNG+GAKL NIFST+F +ETAD   
Sbjct: 61  VEMHTKEKMYIPELIFGNLLTSSNYDDDQKKVTGGRNGFGAKLCNIFSTQFEVETADLNT 120

Query: 185 LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
            K YKQ +T+NM K  +P I+  K    +TK++FKPDL+KF+M  L++D+++++++RV D
Sbjct: 121 GKLYKQTWTDNMTKVGKPKINALKTKKEYTKITFKPDLSKFDMDSLDEDLLSVLRRRVYD 180

Query: 245 LAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV-----------------TRFHERVNE 287
           L G + K+  + LN  R+PV SF  YV+MY K++                 T  HE  NE
Sbjct: 181 LCGTV-KNCNIYLNDKRLPVTSFKSYVEMYVKAIKERSPEPEGEGAPKNYTTIVHEVFNE 239

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VKA 344
           RWE+   +S+G F QVSFVN IAT  GGTHV YV++Q+   ++  ++KK K      +K 
Sbjct: 240 RWEVAFAVSDGSFNQVSFVNSIATTAGGTHVKYVSDQIITKLVETLSKKEKGKKKLMIKP 299

Query: 345 HNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL--SEEFLKKVTAKSGIVET 402
           + V++++++F+N LI+NPAF SQTKE LT + S FG K +   S+  + +V  K+GI + 
Sbjct: 300 NEVRDNMFIFINCLIENPAFTSQTKEQLTTKVSQFGGKEKFVASDNLISRV-LKTGIADK 358

Query: 403 LLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMA 462
           +   AN  + K L+K DG++   ++G   L DAN AG R+  +CTLILTEG SA  LA+A
Sbjct: 359 IRDIANANEDKALQKVDGSRKSRIKGQVNLVDANKAGTRDGLKCTLILTEGLSALNLAVA 418

Query: 463 GLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLR 520
           GL+V+GRD +G FPLRGKLLNVREAS++Q+  N+EI ++K+I+GL+    YN  N+KSLR
Sbjct: 419 GLTVIGRDYYGCFPLRGKLLNVREASADQIAKNAEINSLKQIIGLQHKKTYNAENIKSLR 478

Query: 521 YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
           YGH+ IMTD                            QD DGSHIKGL+INF+ + +P L
Sbjct: 479 YGHIPIMTD----------------------------QDQDGSHIKGLIINFLETSFPGL 510

Query: 581 LKIPSFLVEFITPIVKATNKN---GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGT 637
           L IP FL+EFITPIVK T K     K++ FYSMP++E W++   G    W+ KYYKGLGT
Sbjct: 511 LDIPGFLLEFITPIVKVTVKGRGAKKIIPFYSMPEFETWRDG-EGQTCRWTQKYYKGLGT 569

Query: 638 STSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKE 697
           ST  E +EYF  +  H K F     +D   I+LAFSKKK + RK+WL  F PGN LD   
Sbjct: 570 STPMEAREYFTALDRHLKRFHALQGEDSSCIDLAFSKKKADERKEWLQNFVPGNQLDPAL 629

Query: 698 KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
             I  S+F+NKELILFSM+D  RSIPS++DGLKPGQRK+LF  FKRN   E KVAQ + Y
Sbjct: 630 NEIPISEFINKELILFSMSDNIRSIPSVLDGLKPGQRKVLFGCFKRNLKSEIKVAQLAAY 689

Query: 758 VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
           VSE++ YHHGE SL  TI+G+AQ+FVGSNNIN+L+PNG FG+R  GGKDAA+ARYIFT L
Sbjct: 690 VSENTGYHHGEVSLVQTIIGLAQNFVGSNNINILKPNGAFGSRATGGKDAAAARYIFTEL 749

Query: 818 SPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
           + IT+ +F   D+ +  Y+ +D Q +EP W
Sbjct: 750 NDITKAIFNPLDNPIYTYVQDDEQTVEPQW 779


>gi|10281022|dbj|BAB13752.1| type II DNA topoisomerase [Candida parapsilosis]
          Length = 779

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/810 (51%), Positives = 553/810 (68%), Gaps = 58/810 (7%)

Query: 65  SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
           S++M  + ++ VPGLYKIFDEILVNAADNK RDP M  +KV ID E+++I V N G G+P
Sbjct: 1   SESMKFQEVTIVPGLYKIFDEILVNAADNKIRDPSMKNIKVRIDPENNVIQVFNDGKGIP 60

Query: 125 VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
           VE+H +E +Y+PELIFG+LLTSSNYDD+ KK TGGRNG+GAKL NIFST+F +ETAD   
Sbjct: 61  VEMHTKEKMYIPELIFGNLLTSSNYDDDQKKVTGGRNGFGAKLCNIFSTQFEVETADLNT 120

Query: 185 LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
            K YKQ +T+NM K  +P I+  K    +TK++FKPDL+KF+M  L++D+++++++RV D
Sbjct: 121 GKLYKQTWTDNMTKVGKPKITALKTKKEYTKITFKPDLSKFDMDSLDEDLLSVLRRRVYD 180

Query: 245 LAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV-----------------TRFHERVNE 287
           L G + ++  + LN  R+ V SF  YV+MY K++                 T  HE  N+
Sbjct: 181 LCGTV-RNCNIYLNDKRLSVNSFKSYVEMYVKAIKERSPEPEGEGAPKNFTTIVHEVFND 239

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VKA 344
           RWE+   +S+G F QVSFVN IAT  GGTHV YV++Q+ + ++  ++KK K      +K 
Sbjct: 240 RWEVAFAVSDGTFNQVSFVNSIATTAGGTHVKYVSDQIISKLVETLSKKEKGKKKLMIKP 299

Query: 345 HNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL--SEEFLKKVTAKSGIVET 402
           + V++++++F+N LI+NPAF SQTKE LT + S FG K +   S+  + +V  K+GI E 
Sbjct: 300 NEVRDNMFIFINCLIENPAFTSQTKEQLTTKVSQFGGKEKFVASDNLIARVL-KTGIAEK 358

Query: 403 LLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMA 462
           +   AN  + K L+K DG++   ++G   L DAN AG ++  +CTLILTEG SA  LA+A
Sbjct: 359 IRDIANANEDKALQKVDGSRKSRIKGQVNLVDANKAGTKDGTKCTLILTEGLSALNLAVA 418

Query: 463 GLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLR 520
           GL+V+GRD +G FPLRGKLLNVREAS++Q+  N+EI  +K+I+GL+    Y   N+KSLR
Sbjct: 419 GLTVIGRDYYGCFPLRGKLLNVREASADQIAKNAEINALKQIIGLQHKKAYTAENIKSLR 478

Query: 521 YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
           YGH+MIMTDQ                            D DGSHIKGL+INF+ + +P L
Sbjct: 479 YGHIMIMTDQ----------------------------DQDGSHIKGLIINFLETSFPGL 510

Query: 581 LKIPSFLVEFITPIVKATNKN---GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGT 637
           L IP FL+EFITPIVK T K     KV+ FYSMP++EAW+E   G    W+ KYYKGLGT
Sbjct: 511 LDIPGFLLEFITPIVKVTVKGRGAKKVIPFYSMPEFEAWREG-EGQTCRWTQKYYKGLGT 569

Query: 638 STSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKE 697
           ST  E +EYF  +  H K F     +D   I+LAFSKKK + RK+WL  F PGN LD + 
Sbjct: 570 STPMEAREYFTALDRHLKRFHALQGEDSNYIDLAFSKKKADERKEWLQNFVPGNQLDPEL 629

Query: 698 KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
             I  S+F+NKELILFSM+D  RSIPS++DGLKPGQRK+LF  FKRN   E KVAQ + Y
Sbjct: 630 NEIPISEFINKELILFSMSDNIRSIPSVLDGLKPGQRKVLFGCFKRNLKSEIKVAQLAAY 689

Query: 758 VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
           VSE++ YHHGE SL  TI+G+AQ+FVGSNNIN+L+PNG FG+R  GGKDAA+ARYIFT L
Sbjct: 690 VSENTGYHHGEVSLVQTIIGLAQNFVGSNNINILKPNGAFGSRATGGKDAAAARYIFTEL 749

Query: 818 SPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
           + IT+ +F   D+ +  Y+ +D Q +EP W
Sbjct: 750 NDITKAIFNPLDNPIYSYVQDDEQTVEPQW 779


>gi|183987566|gb|ACC65773.1| topoisomerase II [Pleurotus pulmonarius]
          Length = 692

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/724 (54%), Positives = 511/724 (70%), Gaps = 48/724 (6%)

Query: 160 RNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFK 219
           R+GYGAKL NI+S EF IETAD    KKY Q +T NM +  +  I+K    + +T+V+FK
Sbjct: 1   RHGYGAKLANIYSLEFTIETADKVNGKKYSQTWTKNMTQVGKAKITKNSRNEEYTRVTFK 60

Query: 220 PDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVT 279
           P+L +F MTH++ D   L++KRV D+AG   K VKV LN  R+ +K+F +YV+MY ++ T
Sbjct: 61  PELTRFGMTHIDPDTAGLLRKRVYDMAGT-AKDVKVYLNDERLKIKTFRQYVEMYTEAAT 119

Query: 280 R----------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
                             +E+++ RWE+    S+G FQQVSF N I+TIKGGTHV Y+A+
Sbjct: 120 VGAKENSGGAAQAKPTVIYEQISPRWEVAFATSDGTFQQVSFANSISTIKGGTHVTYIAD 179

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
           Q++ +++A + KKNK A VK   VKNH+W+FVNALI+NP FDSQTKETLTL    FGS+ 
Sbjct: 180 QLSKNIIAHIAKKNKAATVKPAQVKNHMWIFVNALIENPTFDSQTKETLTLPAGKFGSRP 239

Query: 384 ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            LSEEF+KKV  KS +++ +L+WA FK  + +KK DG+K   + G++KL DAN AG +N+
Sbjct: 240 ILSEEFMKKV-QKSSVIDQVLNWAKFKADQQIKKTDGSKRNRLTGMAKLSDANNAGTKNA 298

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
           E+CTLILTEGDSAK+LA+AGL+VVGRD FGVFPLRGKLLNVREA  +Q++ N EI NIKK
Sbjct: 299 EKCTLILTEGDSAKSLAVAGLAVVGRDNFGVFPLRGKLLNVREARHDQIMKNEEIQNIKK 358

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           I+GL+   EY NV SLRYG LMIMTD                            QDHDGS
Sbjct: 359 IMGLQHNKEYTNVSSLRYGRLMIMTD----------------------------QDHDGS 390

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
           HIKGLLINF+  F+PSLLK+P FLVEF+TPIV+ T  N +  +F+++P+YE W E    +
Sbjct: 391 HIKGLLINFLDHFYPSLLKVPEFLVEFVTPIVRVTKGNQRK-NFFTIPEYETWLEET-PD 448

Query: 624 ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
           +  WS KYYKGLGTS+  + +EYF  +  H   F   ++++   I+LAFSKKK + RK+W
Sbjct: 449 SKKWSAKYYKGLGTSSDADAREYFSQMGKHMIPFATMEEEERALIDLAFSKKKADDRKEW 508

Query: 684 LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
           L QF+PG +LD     I ++DF+NKELILFSMAD  RSIPS+ DGLKPGQRK+++  FKR
Sbjct: 509 LRQFKPGTYLDHNIDEIPFTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCFKR 568

Query: 744 NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
              KE KVAQ  GY+SEH+AYHHGE S +STI+ +AQ++VGSNNINLL PNGQ+GTR+QG
Sbjct: 569 KLKKEIKVAQLVGYISEHAAYHHGEMSSSSTIVNLAQNYVGSNNINLLSPNGQYGTRDQG 628

Query: 804 GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
           GKD AS RYIFT ++P+TR L    DD LL    +D   +EP WY+PIIP VLVNG+EGI
Sbjct: 629 GKDHASPRYIFTEIAPLTRLLCHPADDPLLKRQTDDNLLVEPEWYLPIIPMVLVNGAEGI 688

Query: 864 GTGW 867
           GTGW
Sbjct: 689 GTGW 692


>gi|183987588|gb|ACC65784.1| topoisomerase II [Pleurotus cystidiosus]
          Length = 692

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/724 (54%), Positives = 513/724 (70%), Gaps = 48/724 (6%)

Query: 160 RNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFK 219
           R+G+GAKL NI+S EF+IETAD    KKY Q +T NM +  +  I+K   G+ +T+V+FK
Sbjct: 1   RHGFGAKLANIYSLEFMIETADKTSEKKYSQTWTKNMSQVGKAKITKNSRGEEYTRVTFK 60

Query: 220 PDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV- 278
           PDLA+F M +++ D  +L++KRV D+AG + K VKV LN  R+ +K+F +YV+MY  +  
Sbjct: 61  PDLARFGMQYIDADTASLLRKRVYDMAGTV-KDVKVYLNDERLKIKNFKQYVEMYLDAAA 119

Query: 279 ---------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
                          T  +E+++ RWE+    S+G  Q VSF N I+TIKGGTHV Y+A+
Sbjct: 120 ADAKENSGGAAQAKPTVIYEQISPRWEVAFATSDGTPQHVSFANSISTIKGGTHVTYIAD 179

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
           Q+A +++A + KKNK A VK   ++NH+W+FVN+LI+NP FDSQTKETLTL  S FGSK 
Sbjct: 180 QIAKNLIAAITKKNKGATVKPAQIRNHMWIFVNSLIENPTFDSQTKETLTLPASKFGSKP 239

Query: 384 ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            LSEEF+KKV  KS I+E +L+WA FK  + +KK DG+K   + G++KL DAN AG +++
Sbjct: 240 SLSEEFMKKVQ-KSSIIEQVLNWAKFKADQQIKKTDGSKRNRLTGMAKLSDANNAGTKHA 298

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
           E+CTLILTEGDSAK+LA+AGL+VVGRD FGVFPLRGK LNVREA  +Q++ N EI NIKK
Sbjct: 299 EKCTLILTEGDSAKSLAVAGLAVVGRDNFGVFPLRGKFLNVREAKHDQIMKNEEIQNIKK 358

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           I+GL+   EY N+ SLRYG LMIMTDQ                            DHDGS
Sbjct: 359 IMGLQHNKEYANISSLRYGRLMIMTDQ----------------------------DHDGS 390

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
           HIKGLLINF+  F+PSLLK+P FLVEF+TPIV+ T  N +  +F+++P+YE W E    +
Sbjct: 391 HIKGLLINFLDHFYPSLLKVPEFLVEFVTPIVRVTKGNQRK-NFFTIPEYETWLEETP-D 448

Query: 624 ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
           +  W+ KYYKGLGTS+  + +EYF  +  H   F   +D++   I+LAFSKKK + RK+W
Sbjct: 449 SKKWTAKYYKGLGTSSDADAREYFSQMGKHMIPFATMEDEERALIDLAFSKKKADDRKEW 508

Query: 684 LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
           L QF+PG +LD     I ++DF+NKELILFSMAD  RSIPS+ DGLKPGQRK+++  FKR
Sbjct: 509 LRQFKPGTYLDHNIDEIPFTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCFKR 568

Query: 744 NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
              KE KVAQ  GY+SEH+AYHHGE SL+STI+ +AQ++VGSNNINLL PNGQ+GTR+QG
Sbjct: 569 KLKKEIKVAQLVGYISEHAAYHHGEMSLSSTIVNLAQNYVGSNNINLLSPNGQYGTRDQG 628

Query: 804 GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
           GKD AS RYI+T ++P+TR L    DD LL    +D   +EP WY+PIIP VLVNG+EGI
Sbjct: 629 GKDHASPRYIYTEIAPLTRLLCHPSDDPLLKRQTDDNLLVEPEWYLPIIPMVLVNGAEGI 688

Query: 864 GTGW 867
           GTGW
Sbjct: 689 GTGW 692


>gi|351737633|gb|AEQ60668.1| Topoisomerase II [Acanthamoeba castellanii mamavirus]
 gi|398257307|gb|EJN40915.1| topoisomerase II [Acanthamoeba polyphaga lentillevirus]
          Length = 1263

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/1254 (39%), Positives = 702/1254 (55%), Gaps = 189/1254 (15%)

Query: 25   KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES----KTMIHRTISYVPGLY 80
            K+IEE YQKK+  EHIL  PDTYIGSIE+ T  +WI+ E +      +I + I+YVPGLY
Sbjct: 12   KSIEEKYQKKNLHEHILHSPDTYIGSIEEKTCNMWIFNESAGEDDAKIIFKEITYVPGLY 71

Query: 81   KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
            KI+DE++VNAAD+ +R    + +KV IDQ+   ISV N+GDG+ V IH+E  ++VP +IF
Sbjct: 72   KIYDEVIVNAADHNKRCQTCNIIKVDIDQKTGQISVWNNGDGIDVAIHKEHNIWVPSMIF 131

Query: 141  GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
            G LLTS+NYD N +KT GG+NG+GAKL NI+S EF IET D  + KK+ Q FTNNM  K 
Sbjct: 132  GELLTSTNYDKNEEKTVGGKNGFGAKLANIYSVEFTIETVDANKGKKFFQRFTNNMYDKE 191

Query: 201  EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
            EP IS  K+  ++TK++F PD  KF +  L+DD +AL KKRV DLA  +  + KV  N  
Sbjct: 192  EPKISSFKKS-SYTKITFIPDFKKFGLKCLDDDTLALFKKRVFDLA--MTTNAKVYFNDK 248

Query: 261  RVPVKSFAEYVDMY----PKSVTRFHERVNERWEICVTLS---EGQFQQVSFVNGIATIK 313
            ++   +F +YV +Y     +      +  +ERW++ V      + + Q +SFVN I T +
Sbjct: 249  QIVQNNFKKYVGLYFPEGSQHKVVIDDTTHERWKVGVIYDPTDQLEHQNISFVNSICTSR 308

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            GGTHV+ V  Q+ N +   + KK KN  +K   +K +L  FV+A I NP FD+QTKE LT
Sbjct: 309  GGTHVEQVVGQIVNGLKTAIVKKAKNVQIKPAMIKENLIFFVDATIVNPDFDTQTKEYLT 368

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLE 433
             + ++FGSK E++E+F+K V  K+G+ + +++ A  ++  +L K DG     VR   KL 
Sbjct: 369  KKAANFGSKFEVTEKFIKGVI-KTGVCDQIIANAKAREEANLSKTDGKGRGPVR-YEKLY 426

Query: 434  DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            +A+ AG +   +CTLILTEGDSAK  AM+GL+V+GRD +GVFPLRGKLLNVR+AS  ++ 
Sbjct: 427  NAHKAGTKEGYKCTLILTEGDSAKTFAMSGLNVIGRDYYGVFPLRGKLLNVRDASPKKIA 486

Query: 494  NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            +N EI  IKKI+GL+QG  Y+++K LRYG +MI+ DQ                       
Sbjct: 487  DNEEITAIKKIVGLEQGKVYDDLKGLRYGSIMILADQ----------------------- 523

Query: 554  FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG---KVLSFYSM 610
                 D DG HIKGL++NFIH FWPSL+K   F+  F TP++KAT   G   +V++F S 
Sbjct: 524  -----DVDGYHIKGLIMNFIHCFWPSLVKYEGFIQSFATPLLKATKGKGKTKQVVAFTSP 578

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---------- 660
              +E WK+    +   WSIKYYKGLGTS   E +E F ++      + WE          
Sbjct: 579  QSFEEWKKE-NNDGKGWSIKYYKGLGTSDPAEAQECFADLNDKLVKYFWEPKKKNLESES 637

Query: 661  --------------------------------------DDQDGEAIELAFSKKKIEARKK 682
                                                   D   +A+ LAF+  + + RK 
Sbjct: 638  NSKSVDSNKSKTTNKKKIESEFIEEESDIISDTYKPKNKDISEDAMTLAFAGGREDDRKI 697

Query: 683  WLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
            W+  + P N+LD  +K I Y DF++KELI FS+ D+ RS+P+++DG KP  RK+ + S +
Sbjct: 698  WINTYNPDNYLDPSKKRISYYDFIHKELITFSVDDVLRSVPNLMDGFKPSHRKVFYGSVE 757

Query: 743  RNFIK-EAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRN 801
            +N  K E KV+  +G+VS  + YHHG+QSL+STI+GMAQ++VGSNN+NLL P G FG+R 
Sbjct: 758  KNIYKQEIKVSDLTGFVSNMTKYHHGDQSLSSTIVGMAQNYVGSNNLNLLMPLGMFGSRL 817

Query: 802  QGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSE 861
             GGKD+AS RY+ T+L  + + +F   D  +L + +ED  +IEP +Y PIIP +LVNG+E
Sbjct: 818  TGGKDSASPRYLNTKLDDLAKKIFIDYDFDILQHQSEDNCRIEPVYYAPIIPMILVNGAE 877

Query: 862  GIGTGWSSYIPNYNPRDIVANVRRLL---NGEMME------------------------- 893
            GIGTG+S+ I   NPRDI+AN++RLL   N + M+                         
Sbjct: 878  GIGTGYSTKIYPCNPRDIIANIKRLLTNENPKTMKPWFRHLTGTIEKIDGAKYISRAKYE 937

Query: 894  ------------PMHPW---YRGF------GGTI----EKTASKEAGVTYTVTGIIEEVN 928
                        P+  W   Y+ F       GT     EK ASK            +  +
Sbjct: 938  IIGKDTIHITDLPVGIWTDNYKAFLDNLIVQGTAQNAEEKKASKAVSSAKNTKTTTKAGS 997

Query: 929  ETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTT---VDFEVFLSEESMM 985
            +T  R ++ P     +  ++ + + + + +      + YS+D T   + F +      + 
Sbjct: 998  KTGSRTRKNP--ALAKKSQKSVTAKVAKKNPVASSIKTYSEDCTDIRISFTIVFHPGKLD 1055

Query: 986  RTKQEGLLKK-FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQ 1044
               + G L    KL   ++ +NMHLF+ KG IKKYDT   IL  F  +RL  Y+KRK   
Sbjct: 1056 TLIKSGKLDTGLKLVKPLNLTNMHLFNEKGKIKKYDTYGAILRNFVKVRLNLYQKRKDYL 1115

Query: 1045 LENLELELLKLENKVRFILGVVNGEIVV----NNRKRTDLLLELRQKGFTPFPKNSKSIE 1100
            L   + E+  L+ KV+FI  V+ G+IV+     ++K+ ++L  L    F  F        
Sbjct: 1116 LGKWKKEMDILKWKVKFIEYVIEGKIVIFKNGKSKKKEEVLKALEDLKFPKF-------- 1167

Query: 1101 AVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGL---LADR 1151
                              +V    S  Y Y+ S+ +  LTLE+V+ L   LAD+
Sbjct: 1168 ------------------IVGNESSPSYGYITSIGLFNLTLEEVEKLKKQLADK 1203


>gi|183987592|gb|ACC65786.1| topoisomerase II [Pleurotus flabellatus]
          Length = 701

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/732 (54%), Positives = 512/732 (69%), Gaps = 62/732 (8%)

Query: 167 LTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFN 226
           L NI+S EF IETAD    KKY Q +T NM +  +  I+K   G+ WTKV+FKPDLA+F 
Sbjct: 1   LANIYSHEFTIETADKTNEKKYSQTWTKNMTQVGKAKITKNGRGEEWTKVTFKPDLARFG 60

Query: 227 MTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR------ 280
           MTH++ D   L++KRV D+AG + K VKV LN  R+ VK+F +YV+MY  S         
Sbjct: 61  MTHIDPDTAGLLRKRVYDMAGTV-KDVKVYLNDERLKVKNFKQYVEMYLDSAAADAKENS 119

Query: 281 ----------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
                      +E+++ RWE+    S+G FQQVSF N I+TIKGGTHV+Y+++Q+A +++
Sbjct: 120 GGAAQAKASIIYEQISPRWEVGFATSDGTFQQVSFANSISTIKGGTHVNYISDQLAKNLI 179

Query: 331 AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
           A + +KNK A VK   +KNH+W+FVNALI+NP FDSQTKETLTL  S FGS+  LSEEF+
Sbjct: 180 AAITRKNKGATVKPAQIKNHMWIFVNALIENPTFDSQTKETLTLPASKFGSRPTLSEEFM 239

Query: 391 KK---------------VTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDA 435
           KK               +  KS I++ +L+WA FK  + +KK DG+K   + G++KL DA
Sbjct: 240 KKGALPIVLVVLSSYRFLVQKSSIIDQVLNWAKFKADQQIKKTDGSKRTRLTGMAKLSDA 299

Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
           N AG +++E+CTLILTEGDSAK+LA+AGL+VVGRD FGVFPLRGKLLNVREA  +Q++ N
Sbjct: 300 NNAGTKHAEKCTLILTEGDSAKSLAVAGLAVVGRDNFGVFPLRGKLLNVREARHDQIMKN 359

Query: 496 SEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFM 555
            EI NIKKI+GL+   EY+NV SLRYG LMIMTD                          
Sbjct: 360 EEIQNIKKIMGLQHNKEYSNVSSLRYGRLMIMTD-------------------------- 393

Query: 556 LAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEA 615
             QDHDGSHIKGLLINF+  F+PSLLKIP FLVEF+TPIV+ T  N +  +F+++P+YE 
Sbjct: 394 --QDHDGSHIKGLLINFLDHFYPSLLKIPEFLVEFVTPIVRVTKGNQRK-NFFTIPEYEQ 450

Query: 616 WKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKK 675
           W ES   ++  W+ KYYKGLGTS+  + +EYF  ++ H   F   +D++   I+LAFSKK
Sbjct: 451 WIEST-PDSKKWTAKYYKGLGTSSDADAREYFSKMSKHMIPFATMEDEERPLIDLAFSKK 509

Query: 676 KIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRK 735
           K + RK WL QF+PG +LD   + I Y+DF+NKELILFSMAD  RSIPS+ DGLKPGQRK
Sbjct: 510 KADDRKDWLRQFKPGTYLDHNLEEIPYTDFINKELILFSMADNIRSIPSVADGLKPGQRK 569

Query: 736 ILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNG 795
           +++  FKRN  KE KVAQ  GY+SEH+AYHHGE SLA+TI+ +AQ++VGSNNINLL PNG
Sbjct: 570 VIWGCFKRNLKKEIKVAQLVGYISEHAAYHHGEASLAATIINLAQNYVGSNNINLLMPNG 629

Query: 796 QFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTV 855
           Q+GTR+QGGKD AS RYIFT +SP+TR +    DD LL    +D   +EP WYMPI+P V
Sbjct: 630 QYGTRDQGGKDHASPRYIFTEVSPLTRMICHPADDPLLKRQTDDNLLVEPEWYMPILPLV 689

Query: 856 LVNGSEGIGTGW 867
           LVNG++GIGTGW
Sbjct: 690 LVNGADGIGTGW 701


>gi|10281020|dbj|BAB13751.1| type II DNA topoisomerase [Candida dubliniensis]
          Length = 782

 Score =  803 bits (2073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/812 (50%), Positives = 552/812 (67%), Gaps = 59/812 (7%)

Query: 65  SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
           +++M+ + ++ VPGLYKIFDEILVNAADNK RDP M  ++V ID E+++I V N G G+P
Sbjct: 1   TESMVFKEVTIVPGLYKIFDEILVNAADNKIRDPSMKNIRVKIDAENNIIEVMNDGKGIP 60

Query: 125 VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
           VE+H +E +Y+PELIFG+LLTSSNYDDN KK TGGRNG+GAKL NIFST+F +ETAD   
Sbjct: 61  VEMHTKENMYIPELIFGNLLTSSNYDDNEKKVTGGRNGFGAKLCNIFSTQFEVETADLNM 120

Query: 185 LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
            K YKQ +TNNM   S+P I+  K    +TK++F+PDL+KF+M  L++D+++++++RV D
Sbjct: 121 GKLYKQSWTNNMSNVSKPKITTLKTKKEYTKITFRPDLSKFDMDCLDNDLLSVLRRRVYD 180

Query: 245 LAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV------------------TRFHERVN 286
           L G + K+  + LN  R+ + SF  YV+MY K++                  T  HE  N
Sbjct: 181 LCGTV-KNCNIYLNEKRLNISSFKSYVEMYVKAIKERSPEPEPQDGTIKNFTTIVHEVFN 239

Query: 287 ERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VK 343
           +RWE+   +S+G F QVSFVN IAT  GGTHV YV++Q+ N ++  ++KK K      +K
Sbjct: 240 DRWEVAFAVSDGSFNQVSFVNSIATTSGGTHVKYVSDQIINKLVETLSKKEKGKKKLMIK 299

Query: 344 AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE-LSEEFLKKVTAKSGIVET 402
              V++++++F+N LI+NPAF SQTKE LT + S FG K + ++ + L     K+ IVE 
Sbjct: 300 PQEVRDNMFLFINCLIENPAFTSQTKEQLTTKVSQFGGKDKFVANDNLINRILKTSIVEK 359

Query: 403 LLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMA 462
           + + AN  + K L+K DG++   ++G   L DAN AG ++   CTLILTEG SA  LA+A
Sbjct: 360 IRAIANANEDKALQKADGSRKSRIKGQVNLVDANRAGTKDGHNCTLILTEGLSAMNLAVA 419

Query: 463 GLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLR 520
           GLSVVGRD +G FPLRGKLLNVREAS++Q+  N+EI ++K+I+GL+    Y   N+KSLR
Sbjct: 420 GLSVVGRDYYGCFPLRGKLLNVREASADQIAKNAEINSLKQIIGLQHKKVYTAENIKSLR 479

Query: 521 YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
           YGH+MIMTD                            QD DGSHIKGL+INF+ + +P L
Sbjct: 480 YGHIMIMTD----------------------------QDQDGSHIKGLIINFLETSFPGL 511

Query: 581 LKIPSFLVEFITPIVKATNK-----NGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGL 635
           L IP FL+EFITPIVK T +       +V+ FY+MP++E W+++  G    W+ KYYKGL
Sbjct: 512 LDIPGFLLEFITPIVKVTVRARGAGGKRVIPFYTMPEFEHWRDT-EGKQCRWTQKYYKGL 570

Query: 636 GTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQ 695
           GTST  E +EYF  +  H K F     +D   I+LAFSKKK + RK+WL  F PG HLD 
Sbjct: 571 GTSTPMEAREYFTALDRHLKRFHALQGEDKNYIDLAFSKKKADERKEWLQGFLPGTHLDP 630

Query: 696 KEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFS 755
           +   I  SDF+NKELILFSM+D  RSIPS++DG KPGQRK+L+  FK+    E KVAQ +
Sbjct: 631 EITEIPISDFINKELILFSMSDNVRSIPSVLDGFKPGQRKVLYGCFKKKLRSEIKVAQLA 690

Query: 756 GYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFT 815
           GYVSE++ YHHGEQSL  TI+G+AQ+F+GSNNIN+L+PNG FG+R  GGKD ++ARYIFT
Sbjct: 691 GYVSENTGYHHGEQSLVPTIIGLAQNFIGSNNINVLKPNGSFGSRAAGGKDFSAARYIFT 750

Query: 816 RLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
            LS ITR +F   DD L  Y+ +D Q +EP W
Sbjct: 751 ELSEITRKIFNPLDDPLYTYVQDDEQTVEPEW 782


>gi|311977868|ref|YP_003986988.1| DNA topoisomerase 2 [Acanthamoeba polyphaga mimivirus]
 gi|76363498|sp|Q5UQE6.1|TOP2_MIMIV RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
           II
 gi|55417096|gb|AAV50746.1| topoisomerase II [Acanthamoeba polyphaga mimivirus]
 gi|308204860|gb|ADO18661.1| DNA topoisomerase 2 [Acanthamoeba polyphaga mimivirus]
 gi|339061418|gb|AEJ34722.1| topoisomerase II [Acanthamoeba polyphaga mimivirus]
          Length = 1263

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/995 (43%), Positives = 611/995 (61%), Gaps = 101/995 (10%)

Query: 25  KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES----KTMIHRTISYVPGLY 80
           K+IEE YQKK+  EHIL  PDTYIGSIE+ T  +WI+ E +      +I + I+YVPGLY
Sbjct: 12  KSIEEKYQKKNLHEHILHSPDTYIGSIEEKTCNMWIFNESAGEDDAKIIFKEITYVPGLY 71

Query: 81  KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
           KI+DE++VNAAD+ +R    + +KV IDQ+   ISV N+GDG+ V IH+E  ++VP +IF
Sbjct: 72  KIYDEVIVNAADHNKRCQTCNIIKVDIDQKTGQISVWNNGDGIDVAIHKEHNIWVPSMIF 131

Query: 141 GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
           G LLTS+NYD N +KT GG+NG+GAKL NI+S EF IET D  + KK+ Q FTNNM  K 
Sbjct: 132 GELLTSTNYDKNEEKTVGGKNGFGAKLANIYSVEFTIETVDANKGKKFFQRFTNNMYDKE 191

Query: 201 EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
           EP IS  K+  ++TK++F PD  KF +  L+DD +AL KKRV DLA  +  + KV  N  
Sbjct: 192 EPKISSFKKS-SYTKITFIPDFKKFGLKCLDDDTLALFKKRVFDLA--MTTNAKVYFNDK 248

Query: 261 RVPVKSFAEYVDMY----PKSVTRFHERVNERWEICVTL---SEGQFQQVSFVNGIATIK 313
           ++   +F +YV +Y     +      +  +ERW++ V      + + Q +SFVN I T +
Sbjct: 249 QIVQNNFKKYVGLYFPEGSQHKVVIDDTTHERWKVGVIYDPTDQLEHQNISFVNSICTSR 308

Query: 314 GGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
           GGTHV+ V  Q+ N +   + KK KN  +K   +K +L  FV+A I NP FD+QTKE LT
Sbjct: 309 GGTHVEQVVGQIVNGLKTAIVKKAKNVQIKPAMIKENLIFFVDATIVNPDFDTQTKEYLT 368

Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLE 433
            + ++FGSK E++E+F+K V  K+G+ + +++ A  ++  +L K DG     VR   KL 
Sbjct: 369 KKAANFGSKFEVTEKFIKGVI-KTGVCDQIIANAKAREEANLSKTDGKGRGPVR-YEKLY 426

Query: 434 DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
           +A+ AG +   +CTLILTEGDSAK  AM+GL+V+GRD +GVFPLRGKLLNVR+AS  ++ 
Sbjct: 427 NAHKAGTKEGYKCTLILTEGDSAKTFAMSGLNVIGRDYYGVFPLRGKLLNVRDASPKKIA 486

Query: 494 NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
           +N EI  IKKI+GL+QG  Y+++K LRYG +MI+ D                        
Sbjct: 487 DNEEITAIKKIVGLEQGKVYDDLKGLRYGSIMILAD------------------------ 522

Query: 554 FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIV---KATNKNGKVLSFYSM 610
               QD DG HIKGL++NFIH FWPSL+K   F+  F TP++   K   K  +V++F S 
Sbjct: 523 ----QDVDGYHIKGLIMNFIHCFWPSLVKYEGFIQSFATPLLKATKGKGKTKQVVAFTSP 578

Query: 611 PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---------- 660
             +E WK+    +   WSIKYYKGLGTS   E +E F ++      + WE          
Sbjct: 579 QSFEEWKKE-NNDGKGWSIKYYKGLGTSDPAEAQECFADLNDKLVKYFWEPKKKNLESES 637

Query: 661 --------------------------------------DDQDGEAIELAFSKKKIEARKK 682
                                                  D   +A+ LAF+  + + RK 
Sbjct: 638 NSKSVDSNKSKTTNKKKIESEFIEEESDIISDTYKPKNKDISEDAMTLAFAGGREDDRKI 697

Query: 683 WLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
           W+  + P N+LD  +K I Y DF++KELI FS+ D+ RS+P+++DG KP  RK+ + S +
Sbjct: 698 WINTYNPDNYLDPSKKRISYYDFIHKELITFSVDDVLRSVPNLMDGFKPSHRKVFYGSVE 757

Query: 743 RNFIK-EAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRN 801
           +N  K E KV+  +G+VS  + YHHG+QSL+STI+GMAQ++VGSNN+NLL P G FG+R 
Sbjct: 758 KNIYKQEIKVSDLTGFVSNMTKYHHGDQSLSSTIVGMAQNYVGSNNLNLLMPLGMFGSRL 817

Query: 802 QGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSE 861
            GGKD+AS RY+ T+L  + + +F   D  +L + +ED  +IEP +Y PIIP +LVNG+E
Sbjct: 818 TGGKDSASPRYLNTKLDDLAKKIFIDYDFDILQHQSEDNCRIEPVYYAPIIPMILVNGAE 877

Query: 862 GIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVT 921
           GIGTG+S+ I   NPRDI+AN++RLL  E  + M PW+R   GTIEK      G  Y   
Sbjct: 878 GIGTGYSTKIYPCNPRDIIANIKRLLTNENPKTMKPWFRHLTGTIEKI----DGAKYISR 933

Query: 922 GIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ 956
              E + + T+ I +LP+  WT +Y+ FL+++I Q
Sbjct: 934 AKYEIIGKDTIHITDLPVGIWTDNYKAFLDNLIVQ 968


>gi|183987584|gb|ACC65782.1| topoisomerase II [Pleurotus cornucopiae]
          Length = 692

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/724 (54%), Positives = 511/724 (70%), Gaps = 48/724 (6%)

Query: 160 RNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFK 219
           RNGYGAKL NI+S EF IETAD    KKY Q +T NM +  +  I+K    + +T+V+FK
Sbjct: 1   RNGYGAKLANIYSLEFTIETADKVNGKKYSQTWTKNMTQVGKAKITKNSRNEEYTRVTFK 60

Query: 220 PDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVT 279
           P+L +F MTH++ D   L++KRV D+AG + K VKV LN  R+ +K+F +YV+MY ++ T
Sbjct: 61  PELTRFGMTHIDPDTAGLLRKRVYDMAGTV-KDVKVYLNDERLKIKTFKQYVEMYIEAAT 119

Query: 280 R----------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
                             +E+++ RWE+    S+G FQQVSF N I+TIKGGTHV+Y+A+
Sbjct: 120 AGAKENSGGAAQAKPTVIYEQISPRWEVAFATSDGTFQQVSFANSISTIKGGTHVNYIAD 179

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
           Q++  ++A + KKNK A VK   VKNH+W+FVNALI+NP FDSQTKETLTL    FGS+ 
Sbjct: 180 QLSKSIIAHIAKKNKAATVKPAQVKNHMWIFVNALIENPTFDSQTKETLTLPAGKFGSRP 239

Query: 384 ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            LSEEF+KKV  KS I++ +L+WA FK  + +K+ DG+K   + G++KL DAN AG +N+
Sbjct: 240 ALSEEFMKKV-QKSSIIDQVLNWAKFKADQQIKRTDGSKRNRLTGMAKLSDANNAGTKNA 298

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
           E+ TLILTEGDSAK+LA+AGL+VVGRD FGVFPLRGKLLNVREA  +Q++ N EI NIKK
Sbjct: 299 EKYTLILTEGDSAKSLAVAGLAVVGRDNFGVFPLRGKLLNVREARHDQIMKNEEIQNIKK 358

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           I+GL+   EY NV SLRYG LMIMTD                            QD DG+
Sbjct: 359 IMGLQHNKEYTNVSSLRYGRLMIMTD----------------------------QDQDGT 390

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
           HIKGLLINF+  F+PSLLK+P FLVEF+TPIV+ T  N +  +F+++P+YE W E    +
Sbjct: 391 HIKGLLINFLDHFYPSLLKVPEFLVEFVTPIVRVTKGNQRK-NFFTIPEYETWLEET-PD 448

Query: 624 ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
           +  W+ KYYKGLGTS+  + +EYF  +  H   F   +D++   I+LAFSKKK + RK+W
Sbjct: 449 SKKWTAKYYKGLGTSSDADAREYFSQMGKHMIPFATMEDEERALIDLAFSKKKADDRKEW 508

Query: 684 LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
           L QF+PG +LD     I ++DF+NKELILFSMAD  RSIPS+ DGLKPGQRK+++  FKR
Sbjct: 509 LRQFKPGTYLDHNIDEIPFTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCFKR 568

Query: 744 NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
              KE KVAQ  GY+SEH+AYHHGE SL+STI+ +AQ++VGSNNINLL PNGQ+GTR+QG
Sbjct: 569 KLKKEIKVAQLVGYISEHAAYHHGEMSLSSTIVNLAQNYVGSNNINLLSPNGQYGTRDQG 628

Query: 804 GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
           GKD AS RYI+T ++P+TR L    DD LL    +D   +EP WY+PIIP VLVNG+EGI
Sbjct: 629 GKDHASPRYIYTEIAPLTRLLCHPSDDPLLKRQTDDNLLVEPEWYLPIIPMVLVNGAEGI 688

Query: 864 GTGW 867
           GTGW
Sbjct: 689 GTGW 692


>gi|183987572|gb|ACC65776.1| topoisomerase II [Pleurotus eryngii var. ferulae]
          Length = 692

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/724 (54%), Positives = 511/724 (70%), Gaps = 48/724 (6%)

Query: 160 RNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFK 219
           R+GYGAKL NI+S EF IETAD    KKY Q +T NM +  +  I+     + +T+V+FK
Sbjct: 1   RHGYGAKLANIYSLEFTIETADKVNGKKYSQTWTKNMTQVGKAKITNNSRNEEYTRVTFK 60

Query: 220 PDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVT 279
           P+L +F MTH++ D   L++KRV D+AG + K VKV LN  R+ +K+F +YV+MY ++ T
Sbjct: 61  PELTRFGMTHIDADTAGLLRKRVYDMAGTV-KDVKVYLNDERLKIKTFKQYVEMYIEAAT 119

Query: 280 R----------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
                             +E+++ RWE+    S+G FQQVSFVN I+TIKGGTHV+Y+A+
Sbjct: 120 AGAKENSGGAAQAKPTVIYEQISPRWEVAFATSDGTFQQVSFVNSISTIKGGTHVNYIAD 179

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
           Q++  ++A + KKNK A VK   VKNH+W+FVNALI+NP FDSQTKETLTL    FGS+ 
Sbjct: 180 QLSKSIIAHIAKKNKAATVKPAQVKNHMWIFVNALIENPTFDSQTKETLTLPAGKFGSRP 239

Query: 384 ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            LSEEF+KKV  KS I++ +L+WA FK  + +KK DG+K   + G++KL DAN AG +N+
Sbjct: 240 ALSEEFMKKV-QKSSIIDQVLNWAKFKADQQIKKTDGSKRNRLTGMAKLSDANNAGTKNA 298

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
           E+CTLILTEGDSAK+LA+AGL+VVGR  FGVFPLRGKLLNVREA  +Q++ N EI NIKK
Sbjct: 299 EKCTLILTEGDSAKSLAVAGLAVVGRVNFGVFPLRGKLLNVREARHDQIMKNEEIQNIKK 358

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           I+GL+   EY +V SLRYG LMIMTD                            QDHDGS
Sbjct: 359 IMGLQHNKEYTSVSSLRYGRLMIMTD----------------------------QDHDGS 390

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
           HIKGLLINF+  F+PSLLK+P FLVEF+TPIV+ T  N +  +F ++P+YE W E    +
Sbjct: 391 HIKGLLINFLDHFYPSLLKVPEFLVEFVTPIVRVTKGNQRK-NFLTIPEYETWLEET-PD 448

Query: 624 ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
           +  W+ KYYKGLGTS+  + +EYF  +  H   F   +D++   I+LAFSKKK + RK+W
Sbjct: 449 SKKWTAKYYKGLGTSSDADAREYFSQMGKHMIPFATMEDEERALIDLAFSKKKADDRKEW 508

Query: 684 LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
           L QF+PG +LD     I ++DF+NKELILFSMAD  RSIPS+ DGLKPGQRK+++  FKR
Sbjct: 509 LRQFKPGTYLDHNIDEIPFTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCFKR 568

Query: 744 NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
              KE KVAQ  GY+SEH+AYHHGE SL+STI+ +AQ++VGSNNINLL PNGQ+GTR+QG
Sbjct: 569 KLKKEIKVAQLVGYISEHAAYHHGEMSLSSTIVNLAQNYVGSNNINLLSPNGQYGTRDQG 628

Query: 804 GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
           GKD AS RYI+T ++P+TR L    DD LL    +D   +EP WY+PIIP VLVNG+EGI
Sbjct: 629 GKDHASPRYIYTEIAPLTRLLCHPSDDPLLKRQTDDNLLVEPEWYLPIIPMVLVNGAEGI 688

Query: 864 GTGW 867
           GTGW
Sbjct: 689 GTGW 692


>gi|183987590|gb|ACC65785.1| topoisomerase II [Pleurotus djamor]
          Length = 735

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/765 (52%), Positives = 518/765 (67%), Gaps = 87/765 (11%)

Query: 160 RNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFK 219
           RNG+GAKL NI+S EF IETAD    KKY Q +T NM +  +  I+K   G+ WTKV+FK
Sbjct: 1   RNGFGAKLANIYSHEFTIETADKTNEKKYSQTWTKNMTQVGKAKITKNGRGEEWTKVTFK 60

Query: 220 PDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVT 279
           PDLA+F MTH++ D   L++KRV D+AG + K VKV LN  R+ VK+F +YV+MY  S  
Sbjct: 61  PDLARFGMTHIDPDTAGLLRKRVYDMAGTV-KDVKVYLNDERLKVKNFKQYVEMYLDSAA 119

Query: 280 R----------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
                             +E+++ RWE+    S+G FQQVSF N I+TIKGGTHV+Y+++
Sbjct: 120 ADAKENSGGAAQAKASIIYEQISPRWEVGFATSDGTFQQVSFANSISTIKGGTHVNYISD 179

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
           Q+A +++A + KKNK A VK   +KNH+W+FVNALI+NP FDSQTKETLTL  S FGS+ 
Sbjct: 180 QLAKNLIAAITKKNKGAAVKPAQIKNHMWIFVNALIENPTFDSQTKETLTLPASKFGSRP 239

Query: 384 ELSEEFLKK---------------VTAKSGIVETLLSWANFKQSKDLKKNDGTKTED--- 425
            LSEEF+KK               +  KS I++ +L+WA FK  + +KK DG+K      
Sbjct: 240 TLSEEFMKKGCVPIVLVVLSSYRLLVQKSSIIDQVLNWAKFKADQQIKKTDGSKRTRYFH 299

Query: 426 ------------VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFG 473
                       V G++KL DAN AG +++E+CTLILTEGDSAK+LA+AGL+VVGRD FG
Sbjct: 300 SHSTEFVLNSIIVTGMAKLSDANNAGTKHAEKCTLILTEGDSAKSLAVAGLAVVGRDNFG 359

Query: 474 VFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLL 533
           VFPLRGKLLNVREA  +QV+ N EI NIKKI+GL+   EY+NV SLRYG LMIMTD    
Sbjct: 360 VFPLRGKLLNVREARHDQVMKNEEIQNIKKIMGLQHNKEYSNVSSLRYGRLMIMTD---- 415

Query: 534 APLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITP 593
                                   QDHDGSHIKGLLINF+  F+PSLLKIP FLVEF+TP
Sbjct: 416 ------------------------QDHDGSHIKGLLINFLDHFYPSLLKIPEFLVEFVTP 451

Query: 594 IVKAT-----------NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKE 642
           IV+ +            K  +  +F+++P+YE W ES   ++  W+ KYYKGLGTS+  +
Sbjct: 452 IVRVSIFHQCQIPPHVTKGSQRKNFFTIPEYEQWIEST-PDSKKWTAKYYKGLGTSSDAD 510

Query: 643 GKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKY 702
            +EYF  ++ H   F   +D++   I+LAFSKKK + RK WL QF+PG +LD   + I Y
Sbjct: 511 AREYFSKMSKHMIPFATMEDEERPLIDLAFSKKKADDRKDWLRQFKPGTYLDHNLEEIPY 570

Query: 703 SDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHS 762
           +DF+NKELILFSMAD  RSIPS+ DGLKPGQRK+++  FKRN  KE KVAQ  GY+SEH+
Sbjct: 571 TDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCFKRNLKKEIKVAQLVGYISEHA 630

Query: 763 AYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITR 822
            YHHGE SLA+TI+ +AQ++VGSNNINLL PNGQ+GTR+QGGKD AS RYIFT +SP+TR
Sbjct: 631 TYHHGEASLAATIINLAQNYVGSNNINLLMPNGQYGTRDQGGKDHASPRYIFTEVSPLTR 690

Query: 823 FLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGW 867
            +    DD LL    +D   +EP WYMPI+P VLVNG++GIGTGW
Sbjct: 691 MICHPADDPLLKRQTDDNLLVEPEWYMPILPLVLVNGADGIGTGW 735


>gi|183987564|gb|ACC65772.1| topoisomerase II [Pleurotus abalonus]
          Length = 692

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/724 (54%), Positives = 512/724 (70%), Gaps = 48/724 (6%)

Query: 160 RNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFK 219
           R+GYGAKL NI+S EF+IETAD    KKY Q +T NM +  +  I+K   G+ +T+V+FK
Sbjct: 1   RHGYGAKLANIYSLEFMIETADKTSEKKYSQTWTKNMSQVGKAKITKNSRGEEYTRVTFK 60

Query: 220 PDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV- 278
           PDL +F M +++ D  +L++KRV D+AG   K VKV LN  R+ +K+F + V+MY  +  
Sbjct: 61  PDLPRFGMQYIDADTASLLRKRVYDMAGT-AKDVKVYLNDERLKIKNFKQCVEMYLDAAA 119

Query: 279 ---------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
                          T  +E+++ RWE+    S+G  Q VSF N I+TIKGGTHV Y+A+
Sbjct: 120 ADAKENSGGAAQAKPTVIYEQISPRWEVAFATSDGTPQHVSFANSISTIKGGTHVTYIAD 179

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
           Q+A +++A + KKNK A VK   ++NH+W+FVN+LI+NP FDSQTKETLTL  S FGSK 
Sbjct: 180 QIAKNLIAAITKKNKGATVKPAQIRNHMWIFVNSLIENPTFDSQTKETLTLPASKFGSKP 239

Query: 384 ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            LSEEF+KKV  KS I+E +L+WA FK  + +KK DG+K   + G +KL DAN AG +++
Sbjct: 240 SLSEEFMKKVQ-KSSIIEQVLNWAKFKADQQIKKTDGSKRNRLTGTAKLSDANNAGTKHA 298

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
           E+CTLILTEGDSAK+LA+AGL+VVGRD FGVFPLRGKLLNVREA  +Q++ N EI NIKK
Sbjct: 299 EKCTLILTEGDSAKSLAVAGLAVVGRDNFGVFPLRGKLLNVREAKHDQIMKNEEIQNIKK 358

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           I+GL+   EY N+ SLRYG LMIMTD                            QDHDGS
Sbjct: 359 IMGLQHNKEYANIPSLRYGRLMIMTD----------------------------QDHDGS 390

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
           HIKGLLINF+  F+PSLLKIP FLVEF+TPIV+ T  N +  +F+++P+YE W E+   +
Sbjct: 391 HIKGLLINFLDHFFPSLLKIPEFLVEFVTPIVRVTKGN-QHRNFFTIPEYERWLEAT-PD 448

Query: 624 ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
           +  W+ KYYKGLGTS+  + +EYF  ++ H   F   ++ D + I+LAFSKKK + RK W
Sbjct: 449 SKKWTAKYYKGLGTSSDADAREYFGRMSKHMIPFATMEEGDRDLIDLAFSKKKADDRKDW 508

Query: 684 LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
           L QF+PG +LD   + I YSDF+NKELILFSMAD  RSIPS+ DGLKPGQRK+++  FKR
Sbjct: 509 LRQFKPGTYLDHNIEEIPYSDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCFKR 568

Query: 744 NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
              KE KVAQ  GY+SEH+AYHHGE SLA+TI+ +AQ++VGSNNINLL+PNGQ+GTR+QG
Sbjct: 569 KLKKEIKVAQLVGYISEHAAYHHGETSLAATIVNLAQNYVGSNNINLLKPNGQYGTRDQG 628

Query: 804 GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
           GKD AS RYI+T + P+TR +    DD LL    +D   +EP WYMP++P VL+NG+EGI
Sbjct: 629 GKDHASPRYIYTEVMPLTRMICHPADDPLLKRQTDDNLLVEPEWYMPVVPLVLINGAEGI 688

Query: 864 GTGW 867
           GTGW
Sbjct: 689 GTGW 692


>gi|183987570|gb|ACC65775.1| topoisomerase II [Pleurotus citrinopileatus]
          Length = 709

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/740 (53%), Positives = 510/740 (68%), Gaps = 63/740 (8%)

Query: 160 RNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFK 219
           RNGYGAKL NI+S EF IETAD    KKY Q +T NM +  +  I+K    + +T+V+FK
Sbjct: 1   RNGYGAKLANIYSLEFTIETADKVNEKKYSQTWTKNMTQVGKAKITKNSRNEEYTRVTFK 60

Query: 220 PDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVT 279
           P+L +F MTH++ D   L++KRV D+AG + K VKV LN  R+ +K+F +YV+MY ++ T
Sbjct: 61  PELTRFGMTHIDPDTAGLLRKRVYDMAGTV-KDVKVYLNDERLKIKTFKQYVEMYIEAAT 119

Query: 280 R----------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
                             + +++ RWE+    S+G FQQVSF N I+TIKGGTHV+Y+A+
Sbjct: 120 AGAKENSGGAAQAKPTVIYAQISPRWEVAFATSDGTFQQVSFANSISTIKGGTHVNYIAD 179

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
           Q++  ++A + KKNK A VK   VKNH+W+FVNALI+NP F SQTKETLTL    FGS+ 
Sbjct: 180 QLSKSIIAHIAKKNKAATVKPAQVKNHMWIFVNALIENPTFGSQTKETLTLPAGKFGSRP 239

Query: 384 ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            LSEEF+KKV  KS I++ +L+WA FK  + +KK DG+K   + G++KL DAN AG +N+
Sbjct: 240 ALSEEFMKKV-QKSFIIDQVLNWAKFKADRQIKKTDGSKRNRLTGMAKLSDANNAGTKNA 298

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
           E+CTLI TEGDSAK+LA+AGL+VVGRD FGVFPLRGKLLNVREA  +Q++ N EI NIKK
Sbjct: 299 EKCTLIHTEGDSAKSLAVAGLAVVGRDNFGVFPLRGKLLNVREARHDQIMKNEEIQNIKK 358

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           I+GL+   EY NV SLRYG LMIMTD                            QDHDGS
Sbjct: 359 IMGLQHNKEYTNVSSLRYGRLMIMTD----------------------------QDHDGS 390

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT----------------NKNGKVLSF 607
           HIKGLLINF+  F+PSLLK+P FLVEF+TPIV+ +                 K  +  +F
Sbjct: 391 HIKGLLINFLDHFYPSLLKVPEFLVEFVTPIVRVSGLLVSSLMSLYTFVTVTKGNQRKNF 450

Query: 608 YSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA 667
           +++P+YE W E    ++  W+ KYYKGLGTS+  + +EYF  +  H   F   +D++   
Sbjct: 451 FTIPEYETWLEET-PDSKKWTAKYYKGLGTSSDADAREYFSQMGKHMIPFATMEDEERAL 509

Query: 668 IELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVD 727
           I+LAFSKKK + RK+WL QF+PG +LD     I ++DF+NKELILFSMAD  RSIPS+ D
Sbjct: 510 IDLAFSKKKADDRKEWLRQFKPGTYLDHNIDEIPFTDFINKELILFSMADNIRSIPSVAD 569

Query: 728 GLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNN 787
           GLKPGQRK+++  FKR   KE KVAQ  GY+SEH+AYHHGE SL+STI+ +AQ++VGSNN
Sbjct: 570 GLKPGQRKVIWGCFKRKLKKEIKVAQLVGYISEHAAYHHGEMSLSSTIVNLAQNYVGSNN 629

Query: 788 INLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
           INLL PNGQ+GTR+QGGKD AS RYI+T ++P+TR L    DD LL    +D   +EP W
Sbjct: 630 INLLSPNGQYGTRDQGGKDHASPRYIYTEIAPLTRLLCHPSDDPLLKRQTDDNLLVEPEW 689

Query: 848 YMPIIPTVLVNGSEGIGTGW 867
           Y+PIIP VLVNG+EGIGTGW
Sbjct: 690 YLPIIPMVLVNGAEGIGTGW 709


>gi|268574422|ref|XP_002642188.1| Hypothetical protein CBG18156 [Caenorhabditis briggsae]
          Length = 1206

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/1231 (39%), Positives = 690/1231 (56%), Gaps = 166/1231 (13%)

Query: 31   YQKKSQLEHILLRPDTYIGSIE-KHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVN 89
            Y+KKS  EH+LLRPDTYIG +  + +Q +WI   E++ M  + +SY PGL KIFDEILVN
Sbjct: 46   YEKKSPTEHVLLRPDTYIGGVAMRESQFVWIRNSETRRMFTKEVSYPPGLLKIFDEILVN 105

Query: 90   AADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            AADNK RDP M+ ++V +D+E   I+V N+G  +PVEIH  EGVYVP L+FG L TSSNY
Sbjct: 106  AADNKSRDPSMNRLEVWLDRETSRIAVWNNGSALPVEIHPTEGVYVPTLVFGSLFTSSNY 165

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKC-- 207
            DDN  +T GGRNGYGAKL NIFS EF++E  D +  +K+KQ + +NM +  E  I     
Sbjct: 166  DDNEIRTVGGRNGYGAKLCNIFSDEFVVEAVDSRTKRKFKQRWYHNMREFDEAVIEDLTN 225

Query: 208  KEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSF 267
            ++  ++TKV F PDL +F++  L +D++ L+ KRV ++A  L   V+V  NG +  V  F
Sbjct: 226  QQLSDYTKVEFVPDLKRFHIDKLSEDIIDLIGKRVFEVAATLPSDVQVFFNGQKCDVDGF 285

Query: 268  AEYVDMY----PKSVTRFHERVNERWEICV----TLS-EGQF---QQVSFVNGIATIKGG 315
             +YV M+    P S    H     RW + V    T S EG     + VSFVN I T KGG
Sbjct: 286  EDYVRMFNDSNPSSFLFLHP--TSRWHVGVAKRNTFSGEGIVTLPKVVSFVNNINTEKGG 343

Query: 316  THVDYVANQVANHVMAVVNKK--NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            +HVDYV +++ N +  +V+ +  + + +VK   +KN++ +F+N LI+NP+F+SQTKET+T
Sbjct: 344  SHVDYVMDKIVNVMKPLVDSRLGDPSKSVKPATIKNNISLFINCLIENPSFESQTKETVT 403

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA-NFKQSKDLKKNDGTKTEDVRGISKL 432
             +   FGS  +   E + K    SG+++ ++    N K+ K   K   + +  VR I KL
Sbjct: 404  TKPKQFGSSFDCDSEKISKWAETSGLLDEIVDEVLNTKKKKISSKRANSSS--VRDIVKL 461

Query: 433  EDANLAG--GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            EDA  AG  G+ SE+CTLILTEGDSAKALA+AGL ++GR  +GVFPL+GKL+NV      
Sbjct: 462  EDAEWAGVPGK-SEKCTLILTEGDSAKALALAGLEILGRQTYGVFPLKGKLVNVSNLDDI 520

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            +   N EIG I +ILGL       + +S+RYG L+I+TD                     
Sbjct: 521  RASKNEEIGKIVRILGLNFNEPTPSKESIRYGRLLILTD--------------------- 559

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                   QD DGSHIKGL+INFIH FWPSL++   F+  F TP++KA  K  +V+ F+S+
Sbjct: 560  -------QDEDGSHIKGLVINFIHKFWPSLIQSGEFIKSFRTPLLKA-KKGNEVVPFFSL 611

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
             +Y  W E++ G    W +KYYKGLGTSTS E +EYF+N+  H  +F +    D +AI +
Sbjct: 612  NEYRKWAETIEGK---WKVKYYKGLGTSTSNEAREYFRNLDHHTVNFNYAGSSDDDAIRM 668

Query: 671  AFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            AF ++K + RK+W+   +  +  +  EK               +  + + SIPS++DGLK
Sbjct: 669  AFDREKSDERKRWIRGSDEVSTTEDVEK---------------TELNYEESIPSLIDGLK 713

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            P QRKIL+   K +   E KV+Q +G V+   +YHHGE+SL  TI+ M Q F G++N+ L
Sbjct: 714  PSQRKILWTLLKMDETTEMKVSQLAGAVAHRQSYHHGEESLVRTIVRMGQTFCGASNMPL 773

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLS-------------------------------- 818
            LQP GQFGTR++GG DAASARYIFT L+                                
Sbjct: 774  LQPIGQFGTRHEGGNDAASARYIFTSLAYVDIQKTKQFREKRQMPFDSASQKTYMSPESS 833

Query: 819  -------------------PITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNG 859
                               P TR LFP  DD LL+   E+G  +EP    PIIP +LVNG
Sbjct: 834  TSQGGVMTFPGWCYDIMTRPTTRLLFPIADDDLLEKKVEEGITVEPNTLCPIIPLILVNG 893

Query: 860  SEGIGTGWSSYIPNYNPRDIVANVRRL--LNGEMMEPMHPWYRGFGGTIEKTASKEAGVT 917
            +EGIGTGWS+ + N NP D++  +RR   L+  ++  + P+Y  + G IE     +    
Sbjct: 894  TEGIGTGWSTKVANRNPVDVIDMIRRKIDLSSLVVNEIPPFYEDYKGKIEIVTPTK---- 949

Query: 918  YTVTGII-----EEVNETT--LRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDD 970
            +  TG I     E  N +T  + I ELPI  WT  Y+E L +I+++    I  F +   +
Sbjct: 950  FISTGKIKISRPERKNASTFSVEISELPIGVWTSKYKEKLSNILEKLP--ITEFSERHTE 1007

Query: 971  TTVDFEVFLSEESMMRTKQEG---LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILE 1027
              V+F +    +   R  Q+    LL  FKL T+I T N  LFD  G +K++    +I  
Sbjct: 1008 KQVNFRLIFDRKKAARFLQKSNSDLLNYFKLRTSI-TENRVLFDRNGQLKEFGNVSEIAN 1066

Query: 1028 EFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK 1087
            EFF IR + Y+KR ++Q    E +L  + N++ FI  V NG   + +  R  L L+L + 
Sbjct: 1067 EFFEIRKDLYQKRLEIQKRECEAKLKYVNNQMNFIELVTNGTFELKSMDRESLELKLEEI 1126

Query: 1088 GFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGL 1147
            GF            V +  T+ +++S             +Y YLL M +  LTL+++  L
Sbjct: 1127 GF-----------EVDSMKTENSKKS-------------NYGYLLEMPLSRLTLDEMNRL 1162

Query: 1148 LADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
               + + N E+     A  +S W  +LD L+
Sbjct: 1163 KERKSRRNLELKAAESADWKSTWHSELDKLE 1193


>gi|10281014|dbj|BAB13748.1| type II DNA topoisomerase [Issatchenkia orientalis]
          Length = 804

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/834 (49%), Positives = 551/834 (66%), Gaps = 83/834 (9%)

Query: 66  KTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPV 125
           K M  +T+S VPGL+KIFDEILVNAADNK RDP M  + V+I++E ++ISV N G G+P+
Sbjct: 2   KCMEKKTVSIVPGLFKIFDEILVNAADNKIRDPSMKRIDVIINEEENVISVKNDGKGIPI 61

Query: 126 EIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRL 185
           EIH +E +Y+PELIFG+LLTSSNYDD+ KK TGGRNGYGAKL NIFSTEF + TAD    
Sbjct: 62  EIHDKENIYIPELIFGNLLTSSNYDDDQKKVTGGRNGYGAKLCNIFSTEFTVHTADMSHG 121

Query: 186 KKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDL 245
           K+Y QV+ NNM +  +P I   K+ + +T++ FKPDL+KF M  L+ D++ + K+RV DL
Sbjct: 122 KEYTQVWRNNMSEVGKPKILNFKKKNEFTEIIFKPDLSKFGMEKLDHDILGVFKRRVYDL 181

Query: 246 AGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV--------------------------- 278
            G + + ++V LNG  + + +F +YV++Y K++                           
Sbjct: 182 CGSV-RGIRVTLNGELLKINNFKQYVELYVKAINKSKEERPHIPVKIETEDGTPLNGESE 240

Query: 279 ------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDY 320
                             T  HE +N+RWEI   +S+G F QVSFVN IAT  GGTHVD 
Sbjct: 241 ANTETSSTPEPSLNENLPTIVHEIINDRWEIAFCISDGSFNQVSFVNSIATTLGGTHVDD 300

Query: 321 VANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFG 380
           VAN +   +   + +KNK A +K   +K+ +++F+N L++NPAF  QTKE LT + S FG
Sbjct: 301 VANMLCGKITEQIKRKNKKAIIKPFQIKSKMFLFINCLVENPAFTFQTKEYLTTQLSKFG 360

Query: 381 SK-CELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG 439
            K  EL E+F+KK+   +GI++ +L        K LKK DG K   + G  KLEDAN AG
Sbjct: 361 GKRLELPEKFIKKI-LNTGIIDEVLDIVQANADKALKKTDGAKKSRITGYPKLEDANKAG 419

Query: 440 GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
            R   +CTLILTEGDSAK+LA+ GL+VVGR+ +G FPLRGK+LNVREAS++Q++ N  I 
Sbjct: 420 TREGYKCTLILTEGDSAKSLAVQGLAVVGRNYYGCFPLRGKVLNVREASTDQIMKNGAIQ 479

Query: 500 NIKKILGLKQGVEY--NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLA 557
            IK+I+GL+    Y  +++KSLRYG +MIM DQ                           
Sbjct: 480 AIKQIMGLQHKKHYGPDDIKSLRYGRIMIMADQ--------------------------- 512

Query: 558 QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG----KVLSFYSMPDY 613
            DHDGSHIKGLLINF+ + +P LL+IP+FL+EFITPIVK T  +G    K + FYSMP+Y
Sbjct: 513 -DHDGSHIKGLLINFLEASFPGLLEIPNFLIEFITPIVKITIMSGPNRRKTIPFYSMPEY 571

Query: 614 EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
           E W+E+  G+  S+  KYYKGLGTS+++E +EYF  +  H K F    D+D  +I+LAFS
Sbjct: 572 EQWRET-EGSTCSYKQKYYKGLGTSSAQEMREYFTQLDKHLKRFDALRDEDKSSIDLAFS 630

Query: 674 KKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQ 733
           KKK + RK+WL  ++PG +LD     I  S+F+NKELILFSMAD  RSI S++DG KP Q
Sbjct: 631 KKKADDRKEWLRNYQPGTYLDSTLSDIPISEFINKELILFSMADNVRSIASVMDGFKPVQ 690

Query: 734 RKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQP 793
           RKIL+  +KRN   E KV+Q  GY++EH+ YHHG+ SL  +I+G+AQDFVGSNNINLL P
Sbjct: 691 RKILYACYKRNLRDEIKVSQLEGYIAEHTGYHHGDASLMQSIIGLAQDFVGSNNINLLVP 750

Query: 794 NGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
           +G FG+R  GGKDAA+ARYIFT LS ITR +F   D+ LL Y+ +D Q +EP W
Sbjct: 751 HGGFGSRAAGGKDAAAARYIFTELSAITRKIFNPLDNPLLTYVQDDEQTVEPEW 804


>gi|111305596|gb|AAI21351.1| LOC779457 protein [Xenopus (Silurana) tropicalis]
          Length = 757

 Score =  794 bits (2050), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/759 (55%), Positives = 528/759 (69%), Gaps = 63/759 (8%)

Query: 10  TTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI 69
           T SNN N    ++   ++E +YQKK+QLEHILLRPDTYIGS+E  TQ++W+Y+E+   M 
Sbjct: 34  TESNNKN---DSSKKMSVERVYQKKTQLEHILLRPDTYIGSVETVTQSMWVYDEDV-GMN 89

Query: 70  HRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQ 129
            R I+YVPGLYKIFDEILVNAADNKQRD  M+ +K+ ID + ++IS+ N+G G+PV  H+
Sbjct: 90  CRDITYVPGLYKIFDEILVNAADNKQRDKNMNCIKISIDPDSNIISIWNNGKGIPVVEHK 149

Query: 130 EEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYK 189
            E +YVP LIFG LLTSSNYDD  KK TGGRNGYGAKL NIFST+F +ETA  +    +K
Sbjct: 150 VEKMYVPALIFGQLLTSSNYDDEEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFK 209

Query: 190 QVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCL 249
           Q +TNNM K +EP I K  +GD++T ++F+PDLAKF M  L+ D VAL+ +R  D+AG  
Sbjct: 210 QTWTNNMLKTTEPKI-KHFDGDDYTCITFQPDLAKFQMEKLDKDTVALLTRRAYDIAGSC 268

Query: 250 GKSVKVELNGHRVPVKSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQ 301
            K VKV LNG ++PV  F  YVD+Y K        ++   HE  NERW++C+TLSE  FQ
Sbjct: 269 -KGVKVLLNGKKLPVNGFRSYVDLYVKDRLDETGVALKVIHEVANERWDVCLTLSEKGFQ 327

Query: 302 QVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALID 360
           Q+SFVN IAT KGG HVDYV +Q+ + ++ VV KKNK   +VK   VKNH+WVFVN LI+
Sbjct: 328 QISFVNSIATTKGGRHVDYVVDQIVSKLIEVVKKKNKAGVSVKPFQVKNHVWVFVNCLIE 387

Query: 361 NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKND 419
           NP FDSQTKE +TL+   FGSKC+LSE+F  K  +  GIVE++L+W  FK    L KK  
Sbjct: 388 NPTFDSQTKENMTLQPKGFGSKCQLSEKF-SKAASNCGIVESILNWVKFKAQTQLNKKCS 446

Query: 420 GTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRG 479
             K   ++GI KL+DAN AGG++S  CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRG
Sbjct: 447 SVKHSKIKGIPKLDDANDAGGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRG 506

Query: 480 KLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPL 536
           K+LNVREAS  Q++ N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ      
Sbjct: 507 KILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDNESLKTLRYGKIMIMTDQ------ 560

Query: 537 SFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK 596
                                 D DGSHIKGLLINF H  WPSLLK  SFL EFITPIVK
Sbjct: 561 ----------------------DQDGSHIKGLLINFFHHNWPSLLK-HSFLEEFITPIVK 597

Query: 597 ATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKD 656
           AT KN + LSFYS+P++E WK+    N   W IKYYKGLGTSTSKE KEYF ++  H+  
Sbjct: 598 AT-KNKQELSFYSIPEFEEWKKQTE-NQKLWKIKYYKGLGTSTSKEAKEYFADMDRHRII 655

Query: 657 FVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSD 704
           F +   +D  AI LAFSKKK++ RK+WL  F            P   L     K++ Y+D
Sbjct: 656 FRYAGPEDDAAITLAFSKKKVDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYND 715

Query: 705 FVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
           F+NKELILFS +D +RSIPS+VDGLKPGQRK+LF  FK+
Sbjct: 716 FINKELILFSNSDNERSIPSLVDGLKPGQRKVLFTCFKK 754


>gi|183987568|gb|ACC65774.1| topoisomerase II [Sarcomyxa serotina]
          Length = 696

 Score =  793 bits (2048), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/727 (53%), Positives = 508/727 (69%), Gaps = 50/727 (6%)

Query: 160 RNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFK 219
           R+GYGAKLTNI+S EF +ETAD K  +KYKQ ++NNM K  +P I+K   G+ WT+++F+
Sbjct: 1   RHGYGAKLTNIYSHEFTVETADAKTAQKYKQTWSNNMSKVGKPKITKNARGEEWTRITFR 60

Query: 220 PDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV- 278
           PDL +F M  +++D   L++KRV D+AG + K++KV LN  R+ VK+F +Y++MY  S  
Sbjct: 61  PDLKRFGMDSIDEDTAGLLRKRVYDMAGTV-KNIKVFLNDDRLKVKNFKQYIEMYISSAA 119

Query: 279 ---------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
                          T  +E+++ RWE+   +S+G FQ +SF N IAT KGGTHV  V++
Sbjct: 120 AEATDNAGGAAQPKPTVIYEQISNRWEVGFAVSDGTFQHISFANSIATTKGGTHVTVVSD 179

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
           Q+A +++  + KKNK A VKA  +KNH+W+FVNALI+NP FDSQTKET+TL  S FG+K 
Sbjct: 180 QIAKNLITAIAKKNKAATVKAAQIKNHMWIFVNALIENPTFDSQTKETMTLPSSKFGTKP 239

Query: 384 ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            L+E F+KKV  KS I++ +L+WA FK  + +KK DGTK   + G+ KL DAN AG +N+
Sbjct: 240 VLTENFMKKVM-KSPIIDHVLNWAKFKADQQIKKTDGTKRSRLTGLPKLADANNAGTKNA 298

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            +CTLILTEGDSAKALA+AGL VVGRD FGVFPLRGK+LNVREAS +Q++ N EI NIK 
Sbjct: 299 SKCTLILTEGDSAKALAVAGLGVVGRDNFGVFPLRGKILNVREASHDQIMKNQEIQNIKT 358

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           I+GL+    Y  V SLRYG LMIMTDQ                            DHDGS
Sbjct: 359 IMGLQHNKSYTGVSSLRYGRLMIMTDQ----------------------------DHDGS 390

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIV---KATNKNGKVLSFYSMPDYEAWKESL 620
           HIKGLLIN++  F+PSLLK+P FLVEF+TPIV   K T    +   F+++P++E W++  
Sbjct: 391 HIKGLLINYLDHFFPSLLKLPDFLVEFVTPIVRVWKGTGNKKQTKDFFTIPEFEQWQQQT 450

Query: 621 GGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEAR 680
             +   W  KY+KGLGTS   + ++YF +++ H   F    + D E IELAFSKKK + R
Sbjct: 451 P-DFHKWESKYFKGLGTSGDSDARDYFSHMSKHMIPFAPTQEGDKELIELAFSKKKADER 509

Query: 681 KKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCS 740
           K+WL Q +PG  LD + + I YS+F+NKELILFSMAD  RSIPS+ DGLKPGQR++++  
Sbjct: 510 KEWLRQLKPGTCLDHRLEEIPYSEFINKELILFSMADNIRSIPSVADGLKPGQREVIWAC 569

Query: 741 FKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTR 800
           FKR   KE KVAQ  GYVSEH+AYHHGE SLA+TI+ +AQDFVGSNN+NLL PNGQ+GTR
Sbjct: 570 FKRKLKKEIKVAQLVGYVSEHAAYHHGEASLAATIVSLAQDFVGSNNVNLLSPNGQYGTR 629

Query: 801 NQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGS 860
           +QGGKD A+ RYIFT L P+TR L+   DD LL    +D   IEP +Y+P+IP VLVNG+
Sbjct: 630 DQGGKDHAAPRYIFTDLPPLTRALYHPSDDPLLAVQKDDNLVIEPEYYVPVIPLVLVNGA 689

Query: 861 EGIGTGW 867
           EGIGTGW
Sbjct: 690 EGIGTGW 696


>gi|300709311|ref|XP_002996821.1| hypothetical protein NCER_100008 [Nosema ceranae BRL01]
 gi|239606147|gb|EEQ83150.1| hypothetical protein NCER_100008 [Nosema ceranae BRL01]
          Length = 713

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/733 (54%), Positives = 522/733 (71%), Gaps = 37/733 (5%)

Query: 25  KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
           KTIEE YQKK+ LEHILLRPDTYIGS+EK  Q ++I++E +  ++ + IS+VPGLYKIFD
Sbjct: 3   KTIEETYQKKTPLEHILLRPDTYIGSVEKEVQNMYIWDEANGKIVSKNISFVPGLYKIFD 62

Query: 85  EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
           EI+VNAADNK RDPKM  +KV I++E ++ISV+N G GVP++IH +E VYVPELIFG LL
Sbjct: 63  EIIVNAADNKIRDPKMKNIKVEINKEDNIISVYNDGKGVPIKIHSQEKVYVPELIFGQLL 122

Query: 145 TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
           TSSNYDD  KK TGGRNGYGAKL NIFS+EF++ET+D +  K YKQVF NNM    +P I
Sbjct: 123 TSSNYDDKEKKVTGGRNGYGAKLCNIFSSEFVVETSDQEVGKIYKQVFKNNMTVTGKPEI 182

Query: 205 SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
              K+ D +TK++FKPDL +F M +L+DD+V+L KKRV DL+G + K+V V LN  ++ +
Sbjct: 183 KTYKKSD-FTKITFKPDLVRFGMKNLDDDIVSLFKKRVYDLSGIV-KNVNVYLNEQKIEI 240

Query: 265 KSFAEYVDMY-PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
           K+F +YV +Y P+     HE +NERWE+  T SE QFQQVSFVN I+T KGG+HV++V  
Sbjct: 241 KNFKDYVKLYLPEDAVVVHEIINERWELAFTTSEEQFQQVSFVNSISTSKGGSHVNHVVE 300

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
           Q+ + ++  + KK K +NVK   VK+ +++F+N+LIDNPAFDSQTKE LTLR  +FGSKC
Sbjct: 301 QLTDPIIEAL-KKKKISNVKPFQVKSSMFLFINSLIDNPAFDSQTKENLTLRVGAFGSKC 359

Query: 384 ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
           E  ++F+ KV   + +V  +  +   K+   LKK DG K   +  I KLEDA  AG   S
Sbjct: 360 EPLKDFIDKVIKNTEVVTKIADFVKAKEDAALKKTDGKKKGRII-IDKLEDAKWAGTAKS 418

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            +CTL LTEGDSAK + M+G S+VG +R GV+PLRGKLLNVREA++ Q+  N EI  IKK
Sbjct: 419 NECTLYLTEGDSAKTMVMSGRSIVGTERLGVYPLRGKLLNVREATNKQISENVEIIAIKK 478

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           ILGL+    Y +  SLRYGH+MI+TD                            QDHDGS
Sbjct: 479 ILGLQHAKTYTDTSSLRYGHVMIITD----------------------------QDHDGS 510

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
           HIKGLLINF   ++PSLLKIP FL EFITPIV+  N  G++++F+++P+Y  +KE     
Sbjct: 511 HIKGLLINFFDYWYPSLLKIPGFLQEFITPIVRGKNSRGEIVNFFTIPEYLEFKEQ---- 566

Query: 624 ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
             +++ KYYKGLGTST+K+  EYF+N+ LH K+F    D+D E+IELAFSKKK+++RK W
Sbjct: 567 NPNYTFKYYKGLGTSTAKDAVEYFKNLPLHVKNFCPMTDEDKESIELAFSKKKVDSRKTW 626

Query: 684 LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
           LL  E G  LDQ+   I  SDF+NKELILFSMAD  RSIP+++DG KPGQRKILF  FK+
Sbjct: 627 LLGLEQGTFLDQRPSEISISDFINKELILFSMADNFRSIPNVLDGFKPGQRKILFTCFKK 686

Query: 744 NFIKEAKVAQFSG 756
            FI++ K     G
Sbjct: 687 IFIRKLKYQSLLG 699


>gi|402593234|gb|EJW87161.1| DNA topoisomerase 2, partial [Wuchereria bancrofti]
          Length = 1042

 Score =  788 bits (2035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/917 (46%), Positives = 597/917 (65%), Gaps = 79/917 (8%)

Query: 314  GGTHVDYVANQVANHVMAVVNKK---NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
            GG HVDYV +Q+A+ ++ V+ KK   +   NVK   +KNH+W+FVNALI+NP FDSQTKE
Sbjct: 1    GGRHVDYVVDQIASKLIDVIKKKIGKSGGINVKPFQIKNHMWIFVNALIENPTFDSQTKE 60

Query: 371  TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGI 429
            T+TL+  SFGS CELSE+F++    K GIVE +++W  FKQ + L KK    KT  ++G+
Sbjct: 61   TMTLQSKSFGSTCELSEKFIQ-AAMKCGIVEAIMAWVRFKQQETLDKKCSSKKTSKLKGV 119

Query: 430  SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS 489
             KLEDAN AG +NS QCTLILTEGDSAK+LA++GL VVGRD++GVFPLRGK+LNVRE + 
Sbjct: 120  PKLEDANDAGTKNSAQCTLILTEGDSAKSLAVSGLGVVGRDKYGVFPLRGKMLNVREGNH 179

Query: 490  NQVLNNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIF 546
             Q++ N+E+  + KI+GL+  ++Y+   ++K+LRYG +M+M DQ                
Sbjct: 180  KQIMENAEVNALLKIIGLQYRLKYDKDEDMKTLRYGKIMVMADQ---------------- 223

Query: 547  AWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS 606
                        D DGSHIKGL+INFIH  WP+L++  +F+ EFITPIVKAT K  + +S
Sbjct: 224  ------------DQDGSHIKGLVINFIHYNWPALVR-RNFVEEFITPIVKAT-KGKEEIS 269

Query: 607  FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
            F+S+P+Y  W      N  ++ IKYYKGLGTSTSKE KEYF ++  H+  F +  ++D +
Sbjct: 270  FFSLPEYREWLNDTE-NWKTYRIKYYKGLGTSTSKEAKEYFMDMRRHRIQFKYSGEEDDQ 328

Query: 667  AIELAFSKKKIEARKKWLLQF--EPGNH----------LDQKEKYIKYSDFVNKELILFS 714
            A+++AFSKKKIE RK WL  +  E  N            D+    + + DFVNKEL+LFS
Sbjct: 329  ALDMAFSKKKIEERKIWLTNWMAERRNRREDGLTEEYLYDKNTHVVSFKDFVNKELVLFS 388

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
              D +RSIPS+VDGLKPGQRK+LF  FKR   KE KVAQ +G V E SAYHHGE SL ST
Sbjct: 389  NCDNERSIPSLVDGLKPGQRKVLFTCFKRADKKEVKVAQLAGAVGEMSAYHHGEASLMST 448

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +AQDFVGSNNINLL P GQFGTR QGGKD+AS RYIFT+L+P+T+ LFP  D+ +L 
Sbjct: 449  IVNLAQDFVGSNNINLLLPIGQFGTRLQGGKDSASPRYIFTQLNPVTKALFPSIDENVLR 508

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            +L E+ Q+IEP WY P+IPTVLVNG+EGIGT WS+ +P YNPR+IV N+R L++G+  +P
Sbjct: 509  FLFEENQKIEPEWYCPVIPTVLVNGAEGIGTAWSTKVPCYNPREIVDNMRALIDGKEPKP 568

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESI 953
            + PWY+ F GTIE+   +     +   G +  +N  T+ I ELPIR WTQ Y+E  L  +
Sbjct: 569  LIPWYKHFRGTIEQLDDQR----FVCNGEVAVINNETIEITELPIRTWTQTYKETVLVPM 624

Query: 954  IDQND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
            +D ND   + I  F++Y  DTTV F + ++ + +  +K+EGL K FKL + I+T++M LF
Sbjct: 625  MDGNDKQPAVITDFKEYHTDTTVKFVIKMNSDKLRASKEEGLHKVFKLQSVINTTSMVLF 684

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            D  G +++++    I +EFF IR + Y +RK  Q   L  +  +L N+ RFIL  + GEI
Sbjct: 685  DPFGYLRRFENVTDICKEFFEIRKKKYIERKSFQEGLLRAQSERLSNQARFILAKIKGEI 744

Query: 1071 VVNNRKRTDLLLELRQKGFTPFP-----KNSKSIEAVVAGATD----------ETEESEE 1115
            ++ N+++  ++ +L +  F P P     +  K  E +++G               E++ +
Sbjct: 745  LIENKRKAAIVEQLIKMSFKPDPVKKWKEERKKQELIMSGEISQDEDEEEQEENEEDAHQ 804

Query: 1116 NPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
            + E+ + +   DYDYL+ MAI  L+ E+   LL + +    E+  L + T   LW  DL+
Sbjct: 805  SKELASKLS--DYDYLVGMAILKLSEEEKDKLLRESEAKLIELRSLEEMTWADLWNNDLN 862

Query: 1176 ALDMQLDELDKSDARAE 1192
                 L EL+K +A+ +
Sbjct: 863  CF---LAELEKQEAKEQ 876


>gi|10281018|dbj|BAB13750.1| type II DNA topoisomerase [Candida tropicalis]
          Length = 782

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/812 (50%), Positives = 548/812 (67%), Gaps = 59/812 (7%)

Query: 65  SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
           +++M+ + ++ VPGLYKIFDEILVNAADNK RDP M  +KV ID E+++I V N G G+P
Sbjct: 1   TESMVFKEVTIVPGLYKIFDEILVNAADNKIRDPSMKNIKVKIDPENNIIEVMNDGKGIP 60

Query: 125 VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
           VE+H +E +Y+PELIFG+LLTSSNYDDN KK TGGRNG+GAK  NIFST+F +ETAD   
Sbjct: 61  VEMHTKENMYIPELIFGNLLTSSNYDDNQKKVTGGRNGFGAKWCNIFSTQFEVETADLNT 120

Query: 185 LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
            K YKQ +T+NM   S+P I+  K    +TK++FKPDL+KF+M  L+DD++A++++RV D
Sbjct: 121 GKLYKQTWTDNMTNVSKPKITTLKSKKEYTKITFKPDLSKFDMDSLDDDLLAVLRRRVYD 180

Query: 245 LAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV------------------TRFHERVN 286
           L G + KS  + LN  R+ + SF  YV+MY K++                  T  HE  N
Sbjct: 181 LCGTV-KSCNIYLNDKRLSISSFKSYVEMYVKAIRERSPEPLAEDGTLKNFTTIVHEVFN 239

Query: 287 ERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VK 343
           ERWE+   +    F QVSFVN IAT  GGTHV YV++Q+ N ++  ++KK K      +K
Sbjct: 240 ERWEVAFAVGHSTFNQVSFVNSIATTAGGTHVKYVSDQIINKLVDTLSKKEKGKKKLMIK 299

Query: 344 AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE-LSEEFLKKVTAKSGIVET 402
              V++++++F+N LI+NPAF SQTKE LT + S FG K + ++ + L     K+ IV+ 
Sbjct: 300 PQEVRDNMFLFINCLIENPAFTSQTKEQLTTKVSQFGGKEKFVAGDNLISRILKTSIVDK 359

Query: 403 LLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMA 462
           + + A+  + K L+K DG++   ++G   L DAN AG +    CTLILTEG SA  LA+A
Sbjct: 360 IRAIASANEDKALQKVDGSRKSRIKGQVSLVDANKAGTKLGHNCTLILTEGLSALNLAVA 419

Query: 463 GLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLR 520
           GLSVVGRD +G FPLRGKLLNVREAS++Q+  N+EI  +K+I+GL+    Y   N+K LR
Sbjct: 420 GLSVVGRDYYGCFPLRGKLLNVREASTDQISKNAEINALKQIIGLQHKKHYTAENIKQLR 479

Query: 521 YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
           YGH+MIMTD                            QD DGSHIKGL+INF+ + +P L
Sbjct: 480 YGHIMIMTD----------------------------QDQDGSHIKGLIINFLETSFPGL 511

Query: 581 LKIPSFLVEFITPIVKATNK-----NGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGL 635
           L+IP FL+EFITPIVK T K     N +V+ FY+MP++EAW++  G     W+ KYYKGL
Sbjct: 512 LEIPGFLLEFITPIVKVTVKTRGSGNNRVIPFYTMPEFEAWRDGEGAEC-RWTHKYYKGL 570

Query: 636 GTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQ 695
           GTST  E +EYF  +  H K F     QD   I+LAFSKKK + RK+WL  F PG HLD 
Sbjct: 571 GTSTPMEAREYFTALDRHLKKFHALQGQDSNYIDLAFSKKKADERKEWLQGFIPGTHLDP 630

Query: 696 KEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFS 755
           +   I  SDF+NKELILFSM+D  RSIPS++DGLKPGQRK+L+   K+    E KVAQ +
Sbjct: 631 EINEIPISDFINKELILFSMSDNIRSIPSVLDGLKPGQRKVLYGCIKKKLKSEIKVAQLA 690

Query: 756 GYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFT 815
           GYVSE++ YHHGEQSL  TI+G+AQ+FVGSNNIN+L+PNG FG+R  GGKD ++ARYIFT
Sbjct: 691 GYVSENTGYHHGEQSLVQTIIGLAQNFVGSNNINILKPNGSFGSRAAGGKDFSAARYIFT 750

Query: 816 RLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
            L+ ITR +F   DD L +Y+ +D Q +EP W
Sbjct: 751 ELNEITRKIFNPLDDPLYNYVQDDEQTVEPEW 782


>gi|358337562|dbj|GAA55912.1| DNA topoisomerase II [Clonorchis sinensis]
          Length = 2034

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/786 (52%), Positives = 530/786 (67%), Gaps = 75/786 (9%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPD+YIGS E++ Q++W+ +EE + M++R I + PGLYKIFDE
Sbjct: 186 SVERIYQKKTQLEHILLRPDSYIGSTERNVQSMWVMDEEKQCMVYRDILFSPGLYKIFDE 245

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNK RDP M  VKV I+ E ++I + N+G G+PV  H+ E VYVP LIFGHLLT
Sbjct: 246 ILVNAADNKVRDPTMTCVKVDIEPEQNMIKIWNNGKGIPVVQHKVENVYVPTLIFGHLLT 305

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD  +K TGGRNGYGAKL NIFS +FI+ET+     K ++QV+T+NM K S+P IS
Sbjct: 306 SSNYDDTERKVTGGRNGYGAKLCNIFSKKFIVETSSKDYKKSFRQVWTDNMTKTSDPKIS 365

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
             K GD++T ++F PDL +F MT L+ D VAL  +R  DLA      VKV LNG R+ +K
Sbjct: 366 PDK-GDDFTCITFYPDLQRFGMTELDSDTVALFVRRAYDLAATTS-GVKVFLNGKRLAIK 423

Query: 266 SFAEYVDMY----------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGG 315
           SF +YVD+Y          PK V    E VN RW++ V  S   FQQVSFVNGIAT KGG
Sbjct: 424 SFMDYVDLYVKANKESETTPKVV---FEGVNPRWQVAVAPSGSGFQQVSFVNGIATTKGG 480

Query: 316 THVDYVANQVANHVMAVVNKKNKNANV--KAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            HVDY+A+Q+ N ++ +V KK+  + V  K   +KNH+W+FVN LI+NP FDSQTKE +T
Sbjct: 481 KHVDYIADQLNNKLIEIVKKKSGKSGVQIKPFQIKNHMWLFVNCLIENPTFDSQTKENMT 540

Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKL 432
           L+  SFGS C LSE+F+ + + K GIVE++LSW  FK  + L K+    K   ++GI KL
Sbjct: 541 LQPKSFGSTCTLSEKFVTQAS-KCGIVESVLSWVRFKAMEKLDKQCHKAKHVKLKGIPKL 599

Query: 433 EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
           +DAN AG ++S QCTLILTEGDSAK+LA+AGL VVGRD +GVFPLRGKLLNVREASS Q+
Sbjct: 600 DDANNAGTKHSNQCTLILTEGDSAKSLAVAGLGVVGRDNYGVFPLRGKLLNVREASSKQI 659

Query: 493 LNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
           ++N+EI  + KI+GL+   +Y N   +K LRYG +MIMTD                    
Sbjct: 660 MDNAEINALIKIMGLQYKHKYENPESLKDLRYGKIMIMTD-------------------- 699

Query: 550 TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYS 609
                   QD DGSHIKGL+INF+H  WP+LLK  + L EFITPIVK   K    LSFYS
Sbjct: 700 --------QDQDGSHIKGLIINFVHCNWPNLLK-HNVLEEFITPIVKVF-KGKDELSFYS 749

Query: 610 MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
           +P++E W+ S   N  +W IKYYKGLGTS+ KE K+YF ++  H+  F +   +D  +I+
Sbjct: 750 LPEFEEWQRST-TNWHTWRIKYYKGLGTSSGKEAKQYFSDMIRHRIRFRYTGSEDDASIQ 808

Query: 670 LAFSKKKIEARKKWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKELILFSMAD 717
           LAF + K   RK WL  +            P  +L  K+ + I Y DFV+KEL+LFS  D
Sbjct: 809 LAFDRSKASERKNWLTSWTMERKRRRELSLPEPYLYGKDTRAISYHDFVHKELVLFSNLD 868

Query: 718 LQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
            +RSIPSMV          LF   KRN +KE KVAQ +G V+E SAYHHGEQSL  TI+G
Sbjct: 869 NERSIPSMV----------LFTCLKRNLVKEIKVAQLAGSVAELSAYHHGEQSLLGTIVG 918

Query: 778 MAQDFV 783
           +AQ+FV
Sbjct: 919 LAQNFV 924



 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/449 (45%), Positives = 282/449 (62%), Gaps = 9/449 (2%)

Query: 735  KILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPN 794
            ++LF   KRN +KE KVAQ +G V+E SAYHHGEQSL  TI+G+AQ+FVGSNN+N+L P 
Sbjct: 951  QVLFTCLKRNLVKEIKVAQLAGSVAELSAYHHGEQSLLGTIVGLAQNFVGSNNLNVLLPI 1010

Query: 795  GQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPT 854
            GQFGTR  GGKDAASARYIFT LSP+TR +F   DD LL+YL +D Q+IEP WY PI+P 
Sbjct: 1011 GQFGTRLSGGKDAASARYIFTALSPLTRLIFHPADDPLLNYLRDDNQRIEPEWYAPIVPM 1070

Query: 855  VLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEA 914
            VL+NG+EGIGTG+S+ IPNYN  ++++N+ RLL+GE   PM P +RGF GTI++  +   
Sbjct: 1071 VLINGAEGIGTGYSTRIPNYNVLEVISNLYRLLDGEDTLPMLPSFRGFCGTIQELEANR- 1129

Query: 915  GVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQNDSF---IRGFRQYSDD 970
               Y + G +  +++ T+ I ELP+R WTQ Y+E  LE +++  D     I  +++Y  D
Sbjct: 1130 ---YMIHGEVAVLDDDTIEITELPVRTWTQTYKETVLEPMLNGTDKVQPCITDYKEYHTD 1186

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            TTV F V +S E +   +  GL K FKL++ ++T++M LFD  G +K Y   + IL EFF
Sbjct: 1187 TTVRFVVKMSAEKLREAEAIGLHKFFKLSSALTTNSMVLFDQLGCLKHYRNVDLILREFF 1246

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFT 1090
             IRL++YEKRK      L  E  KLEN+ RF+L  +  +I + N+ R +L+  L+   + 
Sbjct: 1247 DIRLQWYEKRKSYLEGMLAAEARKLENQARFVLEKIQSQISIENKPRKELIQILKSAAYD 1306

Query: 1091 PFPKNS-KSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLA 1149
              P  + K     +A   +E E     P         DY+Y+L M + +LT E+   LLA
Sbjct: 1307 SDPVRAWKECLDKLASLEEEMESGSGEPTEQTESGGPDYNYILGMPLWSLTKERKDDLLA 1366

Query: 1150 DRDKLNEEVDDLRKATPESLWVKDLDALD 1178
             RD    E+  LR  T   LW  DL  L+
Sbjct: 1367 QRDAKQNELRVLRSKTASMLWRDDLQKLE 1395


>gi|183987580|gb|ACC65780.1| topoisomerase II [Pleurotus eryngii var. eryngii]
          Length = 680

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/712 (53%), Positives = 499/712 (70%), Gaps = 48/712 (6%)

Query: 172 STEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLE 231
           S EF IETAD    KKY Q +T NM +  +  I+     + +T+V+FKP+L +F MTH++
Sbjct: 1   SLEFTIETADKVNGKKYSQTWTKNMTQVGKAKITNNSRNEEYTRVTFKPELTRFGMTHID 60

Query: 232 DDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR----------- 280
            D   L++KRV D+AG + K VKV LN  R+ +K+F +YV+MY ++ T            
Sbjct: 61  ADTAGLLRKRVYDMAGTV-KDVKVYLNDERLKIKTFKQYVEMYIEAATAGAKENSGGAAQ 119

Query: 281 -----FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK 335
                 +E+++ RWE+    S+G FQQVSF N I+TIKGGTHV+Y+A+Q++  ++A + K
Sbjct: 120 AKPTVIYEQISPRWEVAFATSDGTFQQVSFANSISTIKGGTHVNYIADQLSKSIIAHIAK 179

Query: 336 KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTA 395
           KNK A VK   VKNH+W+FVNALI+NP FDSQTKETLTL    FGS+  LSEEF+KKV  
Sbjct: 180 KNKAATVKPAQVKNHMWIFVNALIENPTFDSQTKETLTLPAGKFGSRPALSEEFMKKV-Q 238

Query: 396 KSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDS 455
           KS I++ +L+WA FK  + +KK DG+K   + G++KL DAN AG +N+ +CTLILTEGDS
Sbjct: 239 KSSIIDQVLNWAKFKADQQIKKTDGSKRNRLTGMAKLSDANNAGTKNAGKCTLILTEGDS 298

Query: 456 AKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNN 515
           AK+ A+AGL+VVGRD FGVFPLRGKLLNVREA  +Q++ N EI NIKKI+GL+   EY +
Sbjct: 299 AKSPAVAGLAVVGRDNFGVFPLRGKLLNVREARHDQIMRNEEIQNIKKIMGLQHNKEYTS 358

Query: 516 VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHS 575
           V SLRYG LMIMTD                            QDHDGSHIKGLLINF+  
Sbjct: 359 VSSLRYGRLMIMTD----------------------------QDHDGSHIKGLLINFLDH 390

Query: 576 FWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGL 635
           F+PSLLK+P FLVEF+TP V+ T  N +  +F+++P+YE W E    ++  W+ KYYKGL
Sbjct: 391 FYPSLLKVPEFLVEFVTPYVRVTKGNQRK-NFFTIPEYETWLEET-PDSKKWTAKYYKGL 448

Query: 636 GTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQ 695
           GTS+  + +EYF  ++ H   F   +D++   I+LAFSKKK + RK+WL QF+PG +LD 
Sbjct: 449 GTSSDADAREYFSQMSKHMVPFATMEDEERALIDLAFSKKKADDRKEWLRQFKPGTYLDH 508

Query: 696 KEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFS 755
               I ++DF+NKELILFSMAD  RSIPS+ DGLKPGQRK+++  FKR   KE KVAQ  
Sbjct: 509 NIDEIPFTDFINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCFKRKLKKEIKVAQLV 568

Query: 756 GYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFT 815
           GY+SEH+AYHHGE SL+STI+ +AQ++VGSNNINLL PNGQ+GTR+QGGKD AS RYI+T
Sbjct: 569 GYISEHAAYHHGEMSLSSTIVNLAQNYVGSNNINLLSPNGQYGTRDQGGKDHASPRYIYT 628

Query: 816 RLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGW 867
            ++P+TR L    DD LL    +D   +EP WY+PIIP VLVNG+EGIGTGW
Sbjct: 629 EIAPLTRLLCHPSDDPLLKRQTDDNLLVEPEWYLPIIPMVLVNGAEGIGTGW 680


>gi|183987578|gb|ACC65779.1| topoisomerase II [Lyophyllum shimeji]
          Length = 692

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/724 (54%), Positives = 503/724 (69%), Gaps = 48/724 (6%)

Query: 160 RNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFK 219
           RNGYGAKL NI+S EF +ETAD     KYKQ +T+NM    +P I+K  +G+ WT+V+FK
Sbjct: 1   RNGYGAKLANIYSHEFTVETADKNTQLKYKQTWTDNMSVCGKPKITKNGKGEEWTRVTFK 60

Query: 220 PDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV- 278
           PDL +F M  +++D   L++KRV D+AG + K VKV LN  R+ +K+F +YV+MY +S  
Sbjct: 61  PDLKRFGMDKIDEDTAGLLRKRVYDMAGTV-KDVKVFLNDERLKIKNFKQYVEMYLQSAH 119

Query: 279 ---------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
                          T  +E+++ RWEI   +SEG FQ VSF N I+T KGGTHV Y+++
Sbjct: 120 AEAAETSGGAAQAKPTVIYEQISARWEIAFAVSEGTFQFVSFANSISTTKGGTHVTYISD 179

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
           Q+A +++A + KKNK A VK   +KNH+W+FVNALI+NP FDSQTKETLTL  S FG+K 
Sbjct: 180 QIAKNLVAAIAKKNKAATVKPAQIKNHMWIFVNALIENPTFDSQTKETLTLPASKFGTKP 239

Query: 384 ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            LSEEFLKKV  KS I++ +L+WA +K  + +K+ DGTK   + G++KL DAN AG +++
Sbjct: 240 VLSEEFLKKV-QKSSIIDNILNWAKYKADQQIKRTDGTKRSRLIGLTKLSDANNAGTKHA 298

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
           + CTLILTEGDSAKALA+AGL VVGRD FGVFPLRGKL NVREA   Q++ N EI NIKK
Sbjct: 299 KNCTLILTEGDSAKALAVAGLGVVGRDNFGVFPLRGKLFNVREARHEQIMKNEEIQNIKK 358

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           I+GL+   +Y N  SLRYG LMIMTD                            QDHDGS
Sbjct: 359 IMGLQHNKDYTNTMSLRYGRLMIMTD----------------------------QDHDGS 390

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
           HIKGL+INF+  F+PSLLK+P FLVEF+TPIV+ T K  +   F+++P+YE W E    +
Sbjct: 391 HIKGLIINFLDHFYPSLLKLPEFLVEFVTPIVRVT-KGKQRHDFFTIPEYEQWLEET-PS 448

Query: 624 ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
           +  W  KY+KGLGTST  + ++YF ++  H   F    D D E I+LAFSKKK + RK+W
Sbjct: 449 SDKWEAKYFKGLGTSTDADARDYFGHMKKHMIPFAPTQDGDKEHIDLAFSKKKADDRKEW 508

Query: 684 LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
           L  F+PG +LD + + I YS+F+NKELILFSMAD  RSIPS+ DGLKPGQRK+++  FKR
Sbjct: 509 LRHFKPGTYLDHRLEEIPYSEFINKELILFSMADNIRSIPSVADGLKPGQRKVMWACFKR 568

Query: 744 NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
              KE KVAQ  GY+ E +AYHHGE SLA TI+ +AQ+FVGSNN+NLL P GQ+GTR QG
Sbjct: 569 KLKKEIKVAQLVGYIGEQAAYHHGEVSLAQTIVNLAQNFVGSNNLNLLDPRGQYGTREQG 628

Query: 804 GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
           GK+ AS RYIFT+   I+R +F   DD LL+   +D   IEP WYMPI+P  L+NG+EGI
Sbjct: 629 GKNHASPRYIFTQPMSISRVIFNPADDALLNAQKDDNMVIEPEWYMPIVPMTLINGAEGI 688

Query: 864 GTGW 867
           GTGW
Sbjct: 689 GTGW 692


>gi|149040009|gb|EDL94093.1| similar to topoisomerase (DNA) II beta [Rattus norvegicus]
          Length = 733

 Score =  764 bits (1973), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/730 (55%), Positives = 508/730 (69%), Gaps = 60/730 (8%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 38  SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 96

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 97  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 156

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 157 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 215

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
           K  +G+++T ++F+PDLAKF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 216 KHFDGEDYTCITFQPDLAKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 274

Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 275 GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 334

Query: 318 VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
           VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 335 VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 394

Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
            SFGSKC+LSE+F K   +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 395 KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 453

Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
           N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 454 NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 513

Query: 496 SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
           +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ                      
Sbjct: 514 AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 551

Query: 553 CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
                 D DGSHIKGLLINFIH  WPSLLK   FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 552 ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 603

Query: 613 YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
           ++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAF
Sbjct: 604 FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 662

Query: 673 SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
           SKKKI+ RK+WL  F            P   L     K++ Y+DF+NKELILFS +D +R
Sbjct: 663 SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 722

Query: 721 SIPSMVDGLK 730
           SIPS+VD  K
Sbjct: 723 SIPSLVDASK 732


>gi|339717598|pdb|3QX3|A Chain A, Human Topoisomerase Iibeta In Complex With Dna And Etoposide
 gi|339717599|pdb|3QX3|B Chain B, Human Topoisomerase Iibeta In Complex With Dna And Etoposide
          Length = 803

 Score =  739 bits (1909), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/796 (49%), Positives = 530/796 (66%), Gaps = 58/796 (7%)

Query: 419  DGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLR 478
            D  K   ++GI KL+DAN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLR
Sbjct: 26   DSVKYSKIKGIPKLDDANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLR 85

Query: 479  GKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAP 535
            GK+LNVREAS  Q++ N+EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ     
Sbjct: 86   GKILNVREASHKQIMENAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ----- 140

Query: 536  LSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIV 595
                                   D DGSHIKGLLINFIH  WPSLLK   FL EFITPIV
Sbjct: 141  -----------------------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIV 176

Query: 596  KATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKK 655
            KA+ KN + LSFYS+P+++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++  H+ 
Sbjct: 177  KAS-KNKQELSFYSIPEFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRI 234

Query: 656  DFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYS 703
             F +   +D  AI LAFSKKKI+ RK+WL  F            P   L     K++ Y+
Sbjct: 235  LFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYN 294

Query: 704  DFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSA 763
            DF+NKELILFS +D +RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+E SA
Sbjct: 295  DFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSA 354

Query: 764  YHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRF 823
            YHHGEQ+L  TI+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS + R 
Sbjct: 355  YHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARL 414

Query: 824  LFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANV 883
            LFP  DD LL +L +D Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NV
Sbjct: 415  LFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNV 474

Query: 884  RRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWT 943
            RR+L+G    PM P Y+ F GTI++    +    Y V+G I  V+  T+ I ELP+R WT
Sbjct: 475  RRMLDGLDPHPMLPNYKNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWT 530

Query: 944  QDYRE-FLESIIDQND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLT 999
            Q Y+E  LE +++  D   + I  +++Y  DTTV F V ++EE + + +  GL K FKL 
Sbjct: 531  QVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQ 590

Query: 1000 TTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKV 1059
            TT++ ++M LFD  G +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ 
Sbjct: 591  TTLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQA 650

Query: 1060 RFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEV 1119
            RFIL  + G+I + NR + DL+  L Q+G+   P  +       A   DET+   ++   
Sbjct: 651  RFILEKIQGKITIENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSS 710

Query: 1120 VNGVQS-IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
             +G  S  D++Y+L+M++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A  
Sbjct: 711  DSGTPSGPDFNYILNMSLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF- 769

Query: 1179 MQLDELDKSDARAEEE 1194
              ++ELDK +++  E+
Sbjct: 770  --VEELDKVESQERED 783


>gi|413923557|gb|AFW63489.1| hypothetical protein ZEAMMB73_491338 [Zea mays]
          Length = 787

 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/790 (53%), Positives = 518/790 (65%), Gaps = 57/790 (7%)

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
            MADLQRSIPSMVDGLKPGQRKILFCSFKRNF+KEAKVAQFSGYVSEHSAYHHGEQSLA T
Sbjct: 1    MADLQRSIPSMVDGLKPGQRKILFCSFKRNFVKEAKVAQFSGYVSEHSAYHHGEQSLAGT 60

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+GMAQ+FVGSNNINL+ P+GQFGTR QGGKDAAS RYIFT+LS ITR +FPKDDD LL+
Sbjct: 61   IIGMAQNFVGSNNINLMYPSGQFGTRAQGGKDAASPRYIFTKLSHITRSIFPKDDDILLN 120

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            YLNEDGQ IEPTWYMPI+P VLVNGSEGIGTGWS+YIPNYNPRDI+AN+RRLLNGE   P
Sbjct: 121  YLNEDGQSIEPTWYMPILPMVLVNGSEGIGTGWSTYIPNYNPRDILANLRRLLNGESTVP 180

Query: 895  MHPWYRGFGGTIEKTA-SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI 953
            MHPWYRGF G+IEKT  +K AG TYTVTGIIE ++ TTLRI ELPIRRWTQDY+++LES+
Sbjct: 181  MHPWYRGFKGSIEKTVNTKVAGSTYTVTGIIEVLDNTTLRITELPIRRWTQDYKDYLESL 240

Query: 954  IDQNDS-----FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMH 1008
                 +     FI       D+  V  +  LSE++M    +EGL+KKFKLTTTI TSNMH
Sbjct: 241  APDTKNKDKVPFIEDVTCQGDNEDVYIQFTLSEKNMNIAMEEGLVKKFKLTTTIGTSNMH 300

Query: 1009 LFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNG 1068
            LFDS G I+KYDTPEQILEEF H+RLEFY KRK+  L++++L+L KLENKVRFI  VV+ 
Sbjct: 301  LFDSDGKIRKYDTPEQILEEFCHLRLEFYCKRKEALLKSIKLDLKKLENKVRFIRCVVDN 360

Query: 1069 EIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDY 1128
            EI+VNNRKR DL LELRQK F PFPK  K  E    GA +E E  E       G +  DY
Sbjct: 361  EIIVNNRKRADLFLELRQKNFDPFPKKKKRAEPAAVGALEEEENEES--PEAAGAEPSDY 418

Query: 1129 DYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSD 1188
            +YLLSM+IGTLTLEK+Q L A++ KL ++V++L   +P+SLW+KDLDA + +LD LD+ D
Sbjct: 419  EYLLSMSIGTLTLEKIQELNAEKQKLVDDVEELENMSPKSLWLKDLDAFEKELDVLDQMD 478

Query: 1189 ARAEEERMK-IKGNGNGDAGPKIVAKRAPKNARKNDK------------------KSNNA 1229
               E +R K I     G +       R    ++K D                   K  ++
Sbjct: 479  LAEELQREKRINAGKKGGSKAAPKKPRKKAASKKLDSDTEDDDFEPAVAKRGAQPKKTSS 538

Query: 1230 RATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLE 1289
            +A ++  E  +       K ++  KKA A     DEE ++P LK RLA  N        +
Sbjct: 539  KANDSASEDGDYVAAENQKKQS--KKASAHV---DEEVDMPSLKDRLAAFNIS------D 587

Query: 1290 PSPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIIID-DDEAFEIAAPE 1348
             SPD S  METE  ++  ++ E      A K+    + S S   I  D D+E  E+ A +
Sbjct: 588  SSPDHSA-METEVTELTEQQNENKATEGASKRGGRKKASSSLATIPSDVDEEVLEVQAQK 646

Query: 1349 EGKKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKPAE------SSPE 1402
            +G+  GRK A                  K+   +  + Q+ + EMLK  E      SSPE
Sbjct: 647  KGR--GRKPAA------VVKPKAPAAARKRAPAQGKVTQKKIDEMLKATEDNNTSASSPE 698

Query: 1403 KKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSPSTSEEVAEVLPP--KARPQRANRRQAR 1460
            KKVRKMR+SPFNKKSGS+L R  T    SG++   S        P   A+P+R  R   +
Sbjct: 699  KKVRKMRSSPFNKKSGSILQRGSTASASSGTTVEASPPSGSSAEPVGAAQPRRTARATKK 758

Query: 1461 YV-LSDSESE 1469
             + +SDS+ E
Sbjct: 759  PIYISDSDPE 768


>gi|440904260|gb|ELR54799.1| DNA topoisomerase 2-alpha, partial [Bos grunniens mutus]
          Length = 1600

 Score =  737 bits (1903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/833 (47%), Positives = 537/833 (64%), Gaps = 69/833 (8%)

Query: 390  LKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTL 448
            L+      GIVE++L+W  FK    L KK    K   ++GI KL+DAN AGGRNS +CTL
Sbjct: 468  LQPTAIGCGIVESILNWVKFKAQIQLNKKCSAVKHNRIKGIPKLDDANDAGGRNSTECTL 527

Query: 449  ILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK 508
            ILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS  Q++ N+EI NI KI+GL+
Sbjct: 528  ILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQ 587

Query: 509  QGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
                Y   +++K+LRYG +MIMTDQ                            D DGSHI
Sbjct: 588  YKKNYEDEDSLKTLRYGKIMIMTDQ----------------------------DQDGSHI 619

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNAS 625
            KGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS+P++E WK S   N  
Sbjct: 620  KGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPEFEEWKSS-TPNHK 676

Query: 626  SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLL 685
             W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI LAFSKK+ + RK+WL 
Sbjct: 677  KWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFSKKQTDDRKEWLT 736

Query: 686  QFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQ 733
             F            P ++L  Q   Y+ Y+DF+NKELILFS +D +RSIPSMVDGLKPGQ
Sbjct: 737  HFMEDRRQRKLLGLPDDYLYGQATTYLTYNDFINKELILFSNSDNERSIPSMVDGLKPGQ 796

Query: 734  RKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQP 793
            RK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ +AQ+FVGSNN+NLLQP
Sbjct: 797  RKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQP 856

Query: 794  NGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIP 853
             GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L +L +D Q++EP WY+PIIP
Sbjct: 857  IGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPAKDDHTLKFLYDDNQRVEPEWYIPIIP 916

Query: 854  TVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKE 913
             VL+NG+EGIGTGWS  IPN++ R++V N+RRL++GE   PM P Y+ F GT+E+ A  +
Sbjct: 917  MVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLMDGEEPLPMLPSYKNFKGTVEELAPNQ 976

Query: 914  AGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSD 969
                Y ++G +  +N TT+ I ELPIR WTQ Y+E  LE ++   ++    I  +R+Y  
Sbjct: 977  ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEKTPPLITDYREYHT 1032

Query: 970  DTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEF 1029
            DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  G +KKYDT   IL +F
Sbjct: 1033 DTTVKFVVKMTEEKLAEAERAGLHKVFKLQTSLTCNSMVLFDHVGCLKKYDTVLDILRDF 1092

Query: 1030 FHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGF 1089
            F +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ N+ + +L+  L Q+G+
Sbjct: 1093 FELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKPKKELIKVLIQRGY 1152

Query: 1090 TPFP---------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLT 1140
               P         K     E   + +  ETE+S+   +         ++YLL M +  LT
Sbjct: 1153 DSDPVKAWKEAQQKVPDEEENEESDSEKETEKSDSATD-----SGPTFNYLLDMPLWYLT 1207

Query: 1141 LEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEE 1193
             EK   L   R++  +E++ L++ +P  LW +DL A   +L+ ++  + + E+
Sbjct: 1208 KEKKDELCKLRNEKEQELETLKRKSPSDLWKEDLAAFVEELEVVEAKEKQDEQ 1260



 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 196/345 (56%), Positives = 253/345 (73%), Gaps = 14/345 (4%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R ++YVPGLYKIFDE
Sbjct: 22  SIERIYQKKTQLEHILLRPDTYIGSVESVTQQMWVYDEDI-GINYREVTYVPGLYKIFDE 80

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRDPKM  +++ ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 81  ILVNAADNKQRDPKMSCIRITIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 140

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD  KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMGK  E  + 
Sbjct: 141 SSNYDDEEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGKAGEMEL- 199

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
           K   G+++T ++F PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+R+PVK
Sbjct: 200 KPFSGEDYTCITFHPDLSKFKMQSLDKDIVALMVRRAYDIAGS-TKDVKVYLNGNRLPVK 258

Query: 266 SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            F  YVD+Y K         +   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 259 GFRSYVDLYLKDKVDETGNPLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 318

Query: 318 VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDN 361
           VDYVA+Q+   ++ VV KKNK    VKAH  + HL +F  AL+++
Sbjct: 319 VDYVADQIVTKLVDVVKKKNKGGVAVKAH--QKHLPLFSIALLNS 361


>gi|429962921|gb|ELA42465.1| hypothetical protein VICG_00564 [Vittaforma corneae ATCC 50505]
          Length = 601

 Score =  717 bits (1851), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/628 (57%), Positives = 461/628 (73%), Gaps = 36/628 (5%)

Query: 21  TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
           T   KTIEE YQKK+  EHILLRPDTYIG+I+K  Q ++++++E K ++ +++SYVPGLY
Sbjct: 2   TLMGKTIEETYQKKTPKEHILLRPDTYIGAIDKDVQQMYVWDDEKKKVVCKSVSYVPGLY 61

Query: 81  KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
           KIFDEILVNAADNK RDPKM+ ++V I +E + IS+ N+G G+PV+IH +E VYVPELIF
Sbjct: 62  KIFDEILVNAADNKMRDPKMNILRVDISKEQNQISIFNNGSGIPVKIHAKENVYVPELIF 121

Query: 141 GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
           GHLLT SNYDDN KK TGGRNGYGAKL NIFSTEFI+ETAD    KKY Q FT NM    
Sbjct: 122 GHLLTGSNYDDNEKKITGGRNGYGAKLCNIFSTEFIVETADKSVKKKYYQRFTKNMDNTE 181

Query: 201 EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
           EP I +   G+ +TK++FKPDL +F M  LEDD+++L+KKRV D+ G L KSV V LNG 
Sbjct: 182 EPIIERY-TGEEFTKITFKPDLKRFKMAELEDDIISLLKKRVYDMCGTL-KSVNVYLNGE 239

Query: 261 RVPVKSFAEYVDMYPKSVTRF-HERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
            +PVK+F EY+ +Y  +  +  H  VN RWE+   +SE QF QVSFVN I+T KGGTHV+
Sbjct: 240 LLPVKNFKEYIKLYLHNEEQVVHSIVNGRWEVGFAVSEDQFNQVSFVNSISTSKGGTHVN 299

Query: 320 YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
           +V +Q+ + +   + KK+K+ +VK  ++KN++++F+N LI+NPAFDSQTKE LTL+ SSF
Sbjct: 300 HVMDQLIDPITEAIKKKDKSLDVKPIHIKNNIFIFINCLIENPAFDSQTKENLTLKVSSF 359

Query: 380 GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG 439
           GSKC   E F+K +   + +VE ++S++  KQS  LKK DGTKT  + GI KLEDANLAG
Sbjct: 360 GSKCLPIESFVKDIIKNTPLVEKIVSFSRAKQSAQLKKTDGTKTSRLSGIPKLEDANLAG 419

Query: 440 GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
            + S++CTLILTEGDSAK LA+AGLSVVGRD +GVFPLRGKLLNVREA+  Q+++NSEI 
Sbjct: 420 TKRSQECTLILTEGDSAKTLAVAGLSVVGRDLYGVFPLRGKLLNVREANHKQIMDNSEIS 479

Query: 500 NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
           +IKKILGL+ G  Y +  +LRYGH+MIMTDQ                            D
Sbjct: 480 SIKKILGLQHGRIYEDTSTLRYGHIMIMTDQ----------------------------D 511

Query: 560 HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKES 619
           HDGSHIKGL+INF+  F+PSLLKI +FL+EFITPI++AT K G    F+++P+YE +K  
Sbjct: 512 HDGSHIKGLIINFLDHFFPSLLKIKNFLLEFITPIIRAT-KKGVTQDFFTIPEYEKFKAE 570

Query: 620 LGGNASSWSIKYYKGLGTSTSKEGKEYF 647
             G    W+IKYYKGLGTSTSK+ K  F
Sbjct: 571 NEG----WAIKYYKGLGTSTSKDAKAVF 594


>gi|400260973|pdb|4FM9|A Chain A, Human Topoisomerase Ii Alpha Bound To Dna
          Length = 763

 Score =  711 bits (1836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/793 (48%), Positives = 521/793 (65%), Gaps = 62/793 (7%)

Query: 426  VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
            ++GI KL+DAN AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVR
Sbjct: 5    IKGIPKLDDANDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVR 64

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
            EAS  Q++ N+EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ            
Sbjct: 65   EASHKQIMENAEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ------------ 112

Query: 543  ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG 602
                            D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN 
Sbjct: 113  ----------------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNK 154

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            + ++FYS+P++E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   
Sbjct: 155  QEMAFYSLPEFEEWKSS-TPNHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGP 213

Query: 663  QDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKEL 710
            +D  AI LAFSKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKEL
Sbjct: 214  EDDAAISLAFSKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKEL 273

Query: 711  ILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQS 770
            ILFS +D +RSIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE S
Sbjct: 274  ILFSNSDNERSIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMS 333

Query: 771  LASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDD 830
            L  TI+ +AQ+FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD
Sbjct: 334  LMMTIINLAQNFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDD 393

Query: 831  KLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE 890
              L +L +D Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R+IV N+RRL++GE
Sbjct: 394  HTLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGE 453

Query: 891  MMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-F 949
               PM P Y+ F GTIE+ A  +    Y ++G +  +N TT+ I ELP+R WTQ Y+E  
Sbjct: 454  EPLPMLPSYKNFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPVRTWTQTYKEQV 509

Query: 950  LESIIDQNDS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN 1006
            LE +++  +     I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++
Sbjct: 510  LEPMLNGTEKTPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNS 569

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            M LFD  G +KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  +
Sbjct: 570  MVLFDHVGCLKKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKI 629

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVV 1120
            +G+I++ N+ + +L+  L Q+G+   P         K  +      +D  +E+E++  V 
Sbjct: 630  DGKIIIENKPKKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVT 689

Query: 1121 NGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQ 1180
            +   +  ++YLL M +  LT EK   L   R++  +E+D L++ +P  LW +DL     +
Sbjct: 690  DSGPT--FNYLLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATFIEE 747

Query: 1181 LDELDKSDARAEE 1193
            L+ ++  + + E+
Sbjct: 748  LEAVEAKEKQDEQ 760


>gi|260941161|ref|XP_002614747.1| hypothetical protein CLUG_05525 [Clavispora lusitaniae ATCC 42720]
 gi|238851933|gb|EEQ41397.1| hypothetical protein CLUG_05525 [Clavispora lusitaniae ATCC 42720]
          Length = 760

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/757 (48%), Positives = 498/757 (65%), Gaps = 60/757 (7%)

Query: 19  GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPG 78
           G   P     E YQK SQLEHIL RPDTYIGS+EK+   +W ++ ES++M+ + ++ VPG
Sbjct: 34  GTPGPRSNASEQYQKLSQLEHILKRPDTYIGSVEKNKVEMWCFDSESESMVFKEVTIVPG 93

Query: 79  LYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
           LYKIFDEILVNAADNK RDP M  +KV +D  ++ ISV N G G+PVEIH +E +Y+PE+
Sbjct: 94  LYKIFDEILVNAADNKIRDPSMKNIKVNVDAPNNTISVMNDGRGIPVEIHTKEQMYIPEM 153

Query: 139 IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
           IFG+LLTSSNYDD+ KK TGGRNG+GAKL NIFSTEF +ETAD    K Y Q +T+NM K
Sbjct: 154 IFGNLLTSSNYDDDQKKVTGGRNGFGAKLCNIFSTEFTVETADQNTGKLYIQTWTDNMSK 213

Query: 199 KSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN 258
             +P I+K K    +TKV+FKPDL KFNM  L++D++A++ +RV DL G + K   + LN
Sbjct: 214 VGKPKITKVKNKKEYTKVTFKPDLTKFNMDALDEDILAVLNRRVYDLCGTV-KDCNIYLN 272

Query: 259 GHRVPVKSFAEYVDMYPKSV--------------TRFHERVNERWEICVTLSEGQFQQVS 304
             ++ +++F  YV+MY K++              +  +E+VNERWE+   +S+G F QVS
Sbjct: 273 EKKLAIRNFKGYVEMYVKAIQARSPQIAGDVTAPSIVYEQVNERWELAFAVSDGNFNQVS 332

Query: 305 FVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VKAHNVKNHLWVFVNALIDN 361
           FVN IAT  GGTHV YV +Q+ + ++A +NK+ K      +KA+ +KNH+++FVN LI+N
Sbjct: 333 FVNSIATTAGGTHVKYVTDQIIDKLLAELNKQEKGKKKLMIKANQIKNHIFIFVNCLIEN 392

Query: 362 PAFDSQTKETLTLRQSSFGS----KCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK 417
           PAF SQTKE LT R S F S    K  ++++F+KK+  K+ I ET+ S  +  + K L K
Sbjct: 393 PAFTSQTKEQLTTRASQFASKQKDKVTITDQFIKKI-LKTNIRETIQSIVDANEGKALSK 451

Query: 418 NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPL 477
           +DG +   ++  +KL DAN AG +   +CTLILTEGDSAK+LA+AG++V+GRD +G FPL
Sbjct: 452 DDGKRRTRIKDQAKLVDANKAGTKEGHKCTLILTEGDSAKSLAVAGMAVIGRDYYGCFPL 511

Query: 478 RGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAP 535
           RGKLLNVR+AS+ Q+  N+EI  +K+I+GL+    Y   N+K LRYGH+MIMTD      
Sbjct: 512 RGKLLNVRDASTEQIAKNAEITALKQIIGLQHRKHYTLENIKDLRYGHVMIMTD------ 565

Query: 536 LSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIV 595
                                 QDHDGSHIKGLLINF  S +P LL IP FL+EFITPIV
Sbjct: 566 ----------------------QDHDGSHIKGLLINFFESSFPGLLNIPGFLLEFITPIV 603

Query: 596 KATNKN-----GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNI 650
           K T K        V+SFYSMP++E W+++ G N   W+ KYYKGLGTSTS +  EYF  +
Sbjct: 604 KVTIKGRGRQAANVISFYSMPEFEEWRDTEGTNC-RWTHKYYKGLGTSTSVDAVEYFSKL 662

Query: 651 TLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKEL 710
             H K+F   +  +   IELAFSKKK + RK+WL  F+PG  LD   K I   +F+N+EL
Sbjct: 663 DKHLKEFHALESDEPPLIELAFSKKKADDRKEWLQGFQPGTFLDSDMKVIPIKNFINEEL 722

Query: 711 IL-FSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI 746
           IL F    +      + +G +PG +K     F++N +
Sbjct: 723 ILVFHGWIISDPFLHVWNGFQPGPKKSHVWLFQKNLV 759


>gi|157830305|pdb|1BGW|A Chain A, Topoisomerase Residues 410-1202
 gi|157830349|pdb|1BJT|A Chain A, Topoisomerase Ii Residues 409-1201
          Length = 793

 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/799 (47%), Positives = 511/799 (63%), Gaps = 56/799 (7%)

Query: 415  LKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGV 474
            LKK+DGT+   +    KLEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G 
Sbjct: 4    LKKSDGTRKSRITNYPKLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGC 63

Query: 475  FPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLA 534
            +PLRGK+LNVREAS++Q+L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD     
Sbjct: 64   YPLRGKMLNVREASADQILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD----- 118

Query: 535  PLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPI 594
                                   QDHDGSHIKGL+INF+ S +  LL I  FL+EFITPI
Sbjct: 119  -----------------------QDHDGSHIKGLIINFLESSFLGLLDIQGFLLEFITPI 155

Query: 595  VKA--TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITL 652
            +K   T      ++FY+MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  
Sbjct: 156  IKVSITKPTKNTIAFYNMPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDR 214

Query: 653  HKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELIL 712
            H K F      D + I+LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELIL
Sbjct: 215  HLKIFHSLQGNDKDYIDLAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELIL 274

Query: 713  FSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLA 772
            FS+AD  RSIP+++DG KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA
Sbjct: 275  FSLADNIRSIPNVLDGFKPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLA 334

Query: 773  STILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKL 832
             TI+G+AQ+FVGSNNI LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L
Sbjct: 335  QTIIGLAQNFVGSNNIYLLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPL 394

Query: 833  LDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMM 892
              Y+ ED + +EP WY+PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +
Sbjct: 395  YKYIQEDEKTVEPEWYLPILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEEL 454

Query: 893  EPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLES 952
            E MHPW+RG+ GTIE+       + Y + G IE++ +  L I ELP R WT   +E+L  
Sbjct: 455  EQMHPWFRGWTGTIEEIEP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLL 510

Query: 953  IIDQNDS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHL 1009
             +  ND    +I+   +  DD  + F + LS E M +T++ G  ++FKL + IS  NM  
Sbjct: 511  GLSGNDKIKPWIKDMEEQHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVA 569

Query: 1010 FDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGE 1069
            FD  G IKKY++  +IL EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E
Sbjct: 570  FDPHGKIKKYNSVNEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKE 629

Query: 1070 IVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAV-----------VAGAT----DETEESE 1114
            + V N+ R  ++ EL   GF  F K  K                V GAT    DE    E
Sbjct: 630  LTVTNKPRNAIIQELENLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHE 689

Query: 1115 ENPEVVNGVQSI--DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVK 1172
            +   V+NG + +   Y+YLL M I +LT E+ Q LL  + +   E+++L K + + +W  
Sbjct: 690  DTENVINGPEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNT 749

Query: 1173 DLDALDMQLDELDKSDARA 1191
            DL A ++   E  + DA A
Sbjct: 750  DLKAFEVGYQEFLQRDAEA 768


>gi|70947313|ref|XP_743285.1| DNA topoisomerase II [Plasmodium chabaudi chabaudi]
 gi|56522707|emb|CAH74370.1| DNA topoisomerase II, putative [Plasmodium chabaudi chabaudi]
          Length = 937

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/721 (49%), Positives = 491/721 (68%), Gaps = 39/721 (5%)

Query: 462  AGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK-QGVEYNNVKSLR 520
            AGLS+VGRDR+GVFPL+GKLLNVR+AS  Q+++N EI NI KI+GL        ++K LR
Sbjct: 1    AGLSIVGRDRYGVFPLKGKLLNVRDASFKQLMDNKEIQNIFKIMGLDITDKNKQDIKGLR 60

Query: 521  YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
            YG LMIMTDQ                            D+DGSHIKGLLIN IH FWPSL
Sbjct: 61   YGSLMIMTDQ----------------------------DYDGSHIKGLLINMIHKFWPSL 92

Query: 581  LKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTS 640
            LK   FL EF+TPIVK   K  + LSF+++ +YE WKE+   N   W IKYYKGLGTST 
Sbjct: 93   LKHKGFLCEFVTPIVKV-QKGNQELSFFTIAEYEQWKENT--NLLGWKIKYYKGLGTSTD 149

Query: 641  KEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYI 700
            KE K+YF +I  HK  F+W  D+DG++I++AFSKK+IE RK WL  F  G+++D KEK +
Sbjct: 150  KEFKQYFSDIQSHKIVFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFILGSYVDHKEKDL 209

Query: 701  KYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSE 760
             Y DFVNKELI +S  D +RSIP+++DG KPGQRK+L+  FKRN   E KVAQ  GY++E
Sbjct: 210  SYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCFKRNLRNECKVAQLVGYIAE 269

Query: 761  HSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPI 820
            HSAYHHGE SL  TI+ MAQ FVGSNNIN L+P GQFG+R +GGKDA++ARYIFT+L+  
Sbjct: 270  HSAYHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGSRKEGGKDASAARYIFTKLASS 329

Query: 821  TRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIV 880
            TR +F + DD +L YLNE+GQ+IEP +Y+P+IPT+LVNG EGIGTG+SS+IPNYN +DI+
Sbjct: 330  TRSIFNEFDDPILKYLNEEGQKIEPQYYIPVIPTILVNGCEGIGTGYSSFIPNYNYKDII 389

Query: 881  ANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIR 940
             N+++ ++ E + PM PWY+ F G IE  ++ ++G  Y   GII ++++ TL I ELPI+
Sbjct: 390  NNIKKYIDKEPLVPMVPWYKDFKGRIE--SNGKSG--YETIGIINKIDDETLEITELPIK 445

Query: 941  RWTQDYREFLESII-DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLT 999
            RWTQDY+EFLE ++ D+ +  I  +   S    V F + +    + + ++EGL K FKL 
Sbjct: 446  RWTQDYKEFLEELLTDEKNQLILDYIDNSSHEDVCFTIKMDPVKLKKAEEEGLEKVFKLK 505

Query: 1000 TTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKV 1059
            +T++T+NM LFDS   +++Y +   IL++F   RL  Y +RK   +  LE E   + NK 
Sbjct: 506  STLTTTNMTLFDSNLKLQRYASELDILKDFCFHRLNAYNERKSYLISKLEKEKRIISNKT 565

Query: 1060 RFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP--KNSKSIEAVVAGATDETEESEENP 1117
            +FIL ++NGE+VVN +K+  L+ EL +KG+ P+      K  E       +  E  E+N 
Sbjct: 566  KFILAIINGELVVNKKKKKILVEELYRKGYDPYKDIHKVKKEEIFEQELLEAAENPEDNE 625

Query: 1118 EVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            E++ GV   DY+YLL+M I +LTLEKV+ LLA   +  +E++ L+  T E++W+KD++ +
Sbjct: 626  EIIAGVTVKDYNYLLNMPIFSLTLEKVEELLAQLKEKEQELEILKSITVETMWLKDIEKV 685

Query: 1178 D 1178
            +
Sbjct: 686  E 686


>gi|310831315|ref|YP_003969958.1| putative DNA topoisomerase IIA precursor [Cafeteria roenbergensis
            virus BV-PW1]
 gi|309386499|gb|ADO67359.1| putative DNA topoisomerase IIA precursor [Cafeteria roenbergensis
            virus BV-PW1]
          Length = 1488

 Score =  700 bits (1806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/1017 (38%), Positives = 611/1017 (60%), Gaps = 92/1017 (9%)

Query: 167  LTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFN 226
             +N++S +F IE  D    K + Q++ +NM   ++P ++  K   ++ KV+  PDL +F 
Sbjct: 528  CSNVWSKKFEIEVQDKTNKKHFHQIWEDNMSVVNKPKVT-SKSTKSFVKVTCYPDLERFK 586

Query: 227  MTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVN 286
            +  L+  +  L +KR  DLA    K VKV+ NG  + VK+  +++D+Y     +  +  N
Sbjct: 587  IKSLKKHL-PLFEKRAYDLALTTEK-VKVKFNGSLINVKNMQDFMDLYFPDTAKIVDTSN 644

Query: 287  ERWEI-CVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAH 345
             R  + C+ L +   + +S+VNGI + +GGTH +Y+ + V   V +++N   K  +    
Sbjct: 645  PRMHVGCIYLPDVGHESISYVNGICSYRGGTHCNYIVDMV---VKSLINDYIKKKDKDIK 701

Query: 346  N----VKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVE 401
                 +K++L  F+N++IDNP+F SQ+KETLT + S FG+  +L++ F+ K+ +KSGI++
Sbjct: 702  ISPALIKDNLVFFINSVIDNPSFSSQSKETLTTKPSDFGTVYKLNKTFMTKL-SKSGIIK 760

Query: 402  TLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAM 461
             ++S A FK+S  + K DG KT  +RGI KLEDAN AG +++ +C L L EGDSA ++ +
Sbjct: 761  QIISLAKFKESVKMTKTDGRKTTVIRGIPKLEDANKAGTKDAHKCGLYLAEGDSALSMIL 820

Query: 462  AGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN---NVKS 518
            +GLS   R+ +G FPL+GKLLNVREAS  Q++ N EI N+KKILGL+   +Y       +
Sbjct: 821  SGLSSKDRNFYGAFPLKGKLLNVREASVKQIMGNDEISNLKKILGLRNEFKYEMDEEFNT 880

Query: 519  LRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWP 578
            LRYG ++I+ D                             D DGSHIKGL++N  HS WP
Sbjct: 881  LRYGKVIILCDS----------------------------DVDGSHIKGLILNMFHSMWP 912

Query: 579  SLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTS 638
            +LLK   F+    TPIVKAT K  ++L FY++ DY+ W+     N   + IKYYKGLGTS
Sbjct: 913  NLLKREGFITTMNTPIVKAT-KGKEILKFYNLTDYDNWRND--NNTKGYYIKYYKGLGTS 969

Query: 639  TSKEGKEYFQNITLHKKDFVWEDDQD--------GEAIELAFSKKKIEARKKWLLQFEPG 690
             SKE KEYFQ+I     D+ W+ ++          +AIELAFSK+  + RK+WL+ ++  
Sbjct: 970  DSKEAKEYFQDIEGSLIDYTWDTNKSKTKGKTVSDDAIELAFSKELADKRKEWLINYDKN 1029

Query: 691  NHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIK-EA 749
              ++  ++ I   DF+NK+LI FS  D QRSIPS+VDG KP QRKI + +  R   K + 
Sbjct: 1030 LTINSNDRQIPVPDFINKDLIHFSNDDTQRSIPSLVDGFKPSQRKIFYGANLRGLEKDQV 1089

Query: 750  KVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAAS 809
            KVAQ +G+VS+  AYHHGE SL   I+GMAQ+FVGSNN+NLL+P GQFG+R  GGKD+AS
Sbjct: 1090 KVAQLAGFVSDRVAYHHGEASLMGAIIGMAQNFVGSNNVNLLEPKGQFGSRVMGGKDSAS 1149

Query: 810  ARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSS 869
             RYI+T+L  +   +F K+D+ +L+Y+N+DG  +EP +Y+PIIP +LVNG+ GIGTG+S+
Sbjct: 1150 PRYIWTKLEKVAGLIFRKEDNPILNYINDDGLMVEPEFYLPIIPMILVNGATGIGTGFST 1209

Query: 870  YIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNE 929
             IP Y+P++++  +++L+ GE  + +HP+Y  F G ++K  +     +Y V+G      +
Sbjct: 1210 SIPCYHPQELIEVLKKLIKGEKYKKIHPYYHKFEGKLKKLDT----TSYQVSGTYHIDKK 1265

Query: 930  TTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQ 989
              + ++ELP+  WT +Y++FLE ++D + +F        D+ + D ++ ++ +   +   
Sbjct: 1266 NNIVVEELPVGEWTTNYKQFLEKMLDTDTNFTN-----YDNNSTDEKILITLK--FKNIP 1318

Query: 990  EGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLE 1049
              L +K K+   I+ +N+H +  KG I+K+   ++I+  F+++RLE Y  RKK  LE  +
Sbjct: 1319 TKLDEKLKMNKKINLTNLHAYTEKGHIQKFKNIDEIINNFYYVRLEGYYNRKKYLLEIYK 1378

Query: 1050 LELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDE 1109
             ++  ++ KV+FI  ++N  +++NN+K+  +  +L  K +    KN K          DE
Sbjct: 1379 HQMDIMKYKVKFIKEIINKTLIINNKKKLIIEQDLETKKYPKMGKNLK----------DE 1428

Query: 1110 TEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
                            I+YDYLL M + +LT EK++ L   + +  E   +L+  TP
Sbjct: 1429 ----------------INYDYLLGMNLYSLTKEKIEELEKQKIEKEEIYTNLKNKTP 1469



 Score =  144 bits (363), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/138 (48%), Positives = 98/138 (71%), Gaps = 3/138 (2%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
           Y K SQ EHILLRP  YIGS+ K+T+ +W+YE+    M  + I+++PGLYKI+DEI+VNA
Sbjct: 6   YDKVSQREHILLRPGMYIGSVSKNTEPMWLYEDNK--MQKKDITFIPGLYKIYDEIIVNA 63

Query: 91  ADNKQRDPKMDAVKVVIDQEHDLISVHNSGD-GVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            D+   D   +++++ ++ +    SV+N+GD G+PV+ H+     +P +IFG LLTSSNY
Sbjct: 64  RDHSINDKSCNSIEIEVNTDEGYFSVYNNGDEGIPVKEHETHKTLIPSMIFGELLTSSNY 123

Query: 150 DDNVKKTTGGRNGYGAKL 167
           DD+ K+TTGG NG G+K 
Sbjct: 124 DDSKKRTTGGMNGLGSKC 141


>gi|183987582|gb|ACC65781.1| topoisomerase II [Pleurotus salmoneostramineus]
          Length = 552

 Score =  699 bits (1803), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/583 (57%), Positives = 431/583 (73%), Gaps = 31/583 (5%)

Query: 285 VNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKA 344
           ++ RWE+    S+G FQQVSF N I+TIKGGTHV+Y+++Q+A +++A + KKNK A VK 
Sbjct: 1   ISPRWEVGFATSDGTFQQVSFANSISTIKGGTHVNYISDQLAKNLIAAITKKNKGATVKP 60

Query: 345 HNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLL 404
             +KNH+W+FVNALI+NP FD QTKETLTL  S FGS+  LSEEF+KKV  KS I++ +L
Sbjct: 61  AQIKNHMWIFVNALIENPTFDGQTKETLTLPASKFGSRPTLSEEFMKKV-QKSSIIDQVL 119

Query: 405 SWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGL 464
           +WA FK  + +KK DG+K   + G++KL DAN AG +++E+CTLILTEGDSAK+LA+AGL
Sbjct: 120 NWAKFKADQQIKKTDGSKRTRLTGMAKLSDANNAGTKHAEKCTLILTEGDSAKSLAVAGL 179

Query: 465 SVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHL 524
           +VVGRD FGVFPLRGKLLNVREA  +Q++ N EI NIKKI+GL+   EY+NV S RYG L
Sbjct: 180 AVVGRDNFGVFPLRGKLLNVREARHDQIMKNEEIQNIKKIMGLQHNKEYSNVSSPRYGRL 239

Query: 525 MIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIP 584
           MIMTDQ                            DHDGSHIKGLLINF+  F+PSL KIP
Sbjct: 240 MIMTDQ----------------------------DHDGSHIKGLLINFLDHFYPSLHKIP 271

Query: 585 SFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGK 644
            FLVEF+TPIV+ T K  +  +F+++P+YE W ES   ++  W+ KYYKGLGTS+  + +
Sbjct: 272 EFLVEFVTPIVRVT-KGSQRKNFFTIPEYEQWIESTP-DSKKWTAKYYKGLGTSSDADAR 329

Query: 645 EYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSD 704
           EYF  ++ H   F   +D++   I+LAFSKKK + RK WL QF+PG +LD   + I Y+D
Sbjct: 330 EYFSKMSKHMIPFATMEDEERPLIDLAFSKKKADDRKDWLRQFKPGTYLDHNLEEIPYTD 389

Query: 705 FVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAY 764
           F+NKELILFSMAD  RSIPS+ DGLKPGQRK+++  FKRN  KE KVAQ  GY+SEH+AY
Sbjct: 390 FINKELILFSMADNIRSIPSVADGLKPGQRKVIWGCFKRNLKKEIKVAQLVGYISEHAAY 449

Query: 765 HHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFL 824
           HHGE SLA+TI+ +AQ++VGSNNINLL PNGQ+GTR+QGGKD AS RYIFT +SP+TR +
Sbjct: 450 HHGEASLAATIINLAQNYVGSNNINLLMPNGQYGTRDQGGKDHASPRYIFTEVSPLTRMI 509

Query: 825 FPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGW 867
              +DD LL    +D   +EP WYMPI+P VLVNG++GIGTGW
Sbjct: 510 CHPEDDPLLKRQTDDNLLVEPEWYMPILPLVLVNGADGIGTGW 552


>gi|163931058|pdb|2RGR|A Chain A, Topoisomerase Iia Bound To G-segment Dna
          Length = 759

 Score =  698 bits (1802), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/783 (47%), Positives = 502/783 (64%), Gaps = 56/783 (7%)

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KLEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++
Sbjct: 10   KLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASAD 69

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            Q+L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTD                     
Sbjct: 70   QILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD--------------------- 108

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFY 608
                   QDHDGSHIKGL+INF+ S +  LL I  FL+EFITPI+K   T      ++FY
Sbjct: 109  -------QDHDGSHIKGLIINFLESSFLGLLDIQGFLLEFITPIIKVSITKPTKNTIAFY 161

Query: 609  SMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAI 668
            +MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F      D + I
Sbjct: 162  NMPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYI 220

Query: 669  ELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
            +LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG
Sbjct: 221  DLAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDG 280

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
             KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI
Sbjct: 281  FKPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNI 340

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
             LL PNG FGTR  GGKDAA+ARYI+T L+ +TR +F   DD L  Y+ ED + +EP WY
Sbjct: 341  YLLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWY 400

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            +PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+
Sbjct: 401  LPILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEE 460

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFR 965
                   + Y + G IE++ +  L I ELP R WT   +E+L   +  ND    +I+   
Sbjct: 461  IEP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDME 516

Query: 966  QYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQI 1025
            +  DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +I
Sbjct: 517  EQHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEI 575

Query: 1026 LEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELR 1085
            L EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL 
Sbjct: 576  LSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELE 635

Query: 1086 QKGFTPFPKNSKSIEAV-----------VAGAT----DETEESEENPEVVNGVQSI--DY 1128
              GF  F K  K                V GAT    DE    E+   V+NG + +   Y
Sbjct: 636  NLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTY 695

Query: 1129 DYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSD 1188
            +YLL M I +LT E+ Q LL  + +   E+++L K + + +W  DL A ++   E  + D
Sbjct: 696  EYLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRD 755

Query: 1189 ARA 1191
            A A
Sbjct: 756  AEA 758


>gi|402591390|gb|EJW85319.1| DNA topoisomerase 2 [Wuchereria bancrofti]
          Length = 852

 Score =  697 bits (1798), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/806 (46%), Positives = 519/806 (64%), Gaps = 52/806 (6%)

Query: 29  EMYQKKSQLEHILLRPDTYIGS-IEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEIL 87
           E YQ+ + L+HIL RPD+YIGS      Q +++Y+   K ++ +    VPGL KIFDEIL
Sbjct: 81  EKYQRLTPLKHILYRPDSYIGSAFLSDEQPIYVYDAIMKQIVKKEARIVPGLLKIFDEIL 140

Query: 88  VNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
           VNAADNK+RDP+M  + V ID+E + IS+ N+G G+PVEIH  EG+YVP +IFG L TSS
Sbjct: 141 VNAADNKRRDPQMTTIAVNIDKERNTISIWNNGRGIPVEIHPTEGIYVPTMIFGTLFTSS 200

Query: 148 NYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKC 207
           NYDD+  K  GGRNG+GAKL NIF TEF +ET   +   ++ Q + NNM    +P IS  
Sbjct: 201 NYDDSELKIVGGRNGFGAKLCNIFCTEFSVETCTKQSGLRFFQCWRNNMNDVDDPIISDA 260

Query: 208 K-EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
                ++T V+FKPDL+KF ++ L++D + +M +R+VD+AG L   V V LNG ++ V  
Sbjct: 261 STNASDYTCVTFKPDLSKFKLSTLDEDTIQVMIRRIVDIAGTL-DGVNVFLNGTKIEVSG 319

Query: 267 FAEYVDMYP--------KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
           F +YV ++          S   F+  VN+RW+I V  S   +  +SFVN I T+KGG HV
Sbjct: 320 FEDYVKLFSTYTGGNFENSTVPFYCSVNDRWQIAVARSNAGYNHISFVNNINTLKGGRHV 379

Query: 319 DYVANQVANHVMAVVNK-KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQS 377
           DY+ NQ+ + +   +++      ++ AH +KN L +FVN+LI+NPAF+SQ+KE LT    
Sbjct: 380 DYIVNQIVSRLKQEISQCCGCEKSISAHQIKNRLHIFVNSLIENPAFESQSKEYLTTSVK 439

Query: 378 SFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANL 437
           +FGS C + E F +     S I+  LL   + + +  L ++      D   +SKLEDA  
Sbjct: 440 NFGSTCIIPESFYENFLKDSDIIHHLLCDISQQHATSLNRSMNRSLWD---LSKLEDAAD 496

Query: 438 AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
           AG +N   CTLI+TEGDSAKALA+AGL+V+GR ++GVFP+RGKL NVR   +   + N+E
Sbjct: 497 AGTKNGYNCTLIITEGDSAKALAVAGLAVIGRKQYGVFPIRGKLTNVRGMDAKMAVQNAE 556

Query: 498 IGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
           I  + +ILGLK G  Y+N   +KSLRYG L+IMTD                         
Sbjct: 557 ISALVRILGLKFGENYSNDEKLKSLRYGRLLIMTD------------------------- 591

Query: 555 MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYE 614
              QD DGSHIKGL++NF+H +WPSLLK  +++  FITP++KA  +   V SFYS  DYE
Sbjct: 592 ---QDPDGSHIKGLIVNFLHVYWPSLLK-ANYVSYFITPLLKA-KRGSDVKSFYSTADYE 646

Query: 615 AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
            W+     ++  +SIKYYKGLGTS++KE +EYF +I  H  +F+++     E+IELAF+K
Sbjct: 647 KWRAE-NPDSVKYSIKYYKGLGTSSAKEAREYFNDIERHTINFIYDGKASDESIELAFAK 705

Query: 675 KKIEARKKWLLQFEP---GNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKP 731
            K + RK W+ +         +D       +S+FVN+EL+ +S  DL+RS+P++VDGLKP
Sbjct: 706 NKADDRKVWIAESSKLLLSTAVDSNRNQKTFSEFVNEELVEYSQLDLRRSLPNVVDGLKP 765

Query: 732 GQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLL 791
            QRK+LF  F+R    E +V+Q +G VS++  YHHGE+SL +TI+ +AQDFVGSNN+NLL
Sbjct: 766 SQRKVLFTMFERYERGEVRVSQLAGAVSQYCGYHHGEESLVNTIVRLAQDFVGSNNLNLL 825

Query: 792 QPNGQFGTRNQGGKDAASARYIFTRL 817
            P GQFGTR  GG+D ASARYI+T L
Sbjct: 826 LPLGQFGTRLSGGEDVASARYIYTSL 851


>gi|297039743|pdb|3L4J|A Chain A, Topoisomerase Ii-Dna Cleavage Complex, Apo
 gi|297039748|pdb|3L4K|A Chain A, Topoisomerase Ii-Dna Cleavage Complex, Metal-Bound
          Length = 722

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/767 (48%), Positives = 494/767 (64%), Gaps = 59/767 (7%)

Query: 431  KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
            KLEDAN AG +   +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++
Sbjct: 8    KLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASAD 67

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            Q+L N+EI  IKKI+GL+   +Y + KSLRYGHLMIMTDQ                    
Sbjct: 68   QILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTDQ-------------------- 107

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFY 608
                    DHDGSHIKGL+INF+ S +P LL I  FL+EFITPI+K   T      ++FY
Sbjct: 108  --------DHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFY 159

Query: 609  SMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAI 668
            +MPDYE W+E    +  +W  KYYKGLGTS ++E +EYF N+  H K F      D + I
Sbjct: 160  NMPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYI 218

Query: 669  ELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDG 728
            +LAFSKKK + RK+WL Q+EPG  LD   K I  SDF+NKELILFS+AD  RSIP+++DG
Sbjct: 219  DLAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDG 278

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
             KPGQRK+L+  FK+N   E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI
Sbjct: 279  FKPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNI 338

Query: 789  NLLQPNGQFGTRNQGGKDAASAR-YIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
             LL PNG FGTR  GGKDAA+AR YI+T L+ +TR +F   DD L  Y+ ED + +EP W
Sbjct: 339  YLLLPNGAFGTRATGGKDAAAARXYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEW 398

Query: 848  YMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIE 907
            Y+PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE
Sbjct: 399  YLPILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIE 458

Query: 908  KTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGF 964
            +       + Y + G IE++ +  L I ELP R WT   +E+L   +  ND    +I+  
Sbjct: 459  EIEP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDM 514

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
             +  DD  + F + LS E M +T++ G  ++FKL + IS  NM  FD  G IKKY++  +
Sbjct: 515  EEQHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNE 573

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            IL EF+++RLE+Y+KRK    E L+ E+ K   +V+FI  ++  E+ V N+ R  ++ EL
Sbjct: 574  ILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQEL 633

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
               GF  F K  K               SEE    + G     Y+YLL M I +LT E+ 
Sbjct: 634  ENLGFPRFNKEGKPYYG-----------SEE----LYGT----YEYLLGMRIWSLTKERY 674

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARA 1191
            Q LL  + +   E+++L K + + +W  DL A ++   E  + DA A
Sbjct: 675  QKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDAEA 721


>gi|145480573|ref|XP_001426309.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393383|emb|CAK58911.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1196

 Score =  672 bits (1735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/880 (41%), Positives = 539/880 (61%), Gaps = 72/880 (8%)

Query: 330  MAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEE 388
            M  + KK K   N+K   VK+ + +F+N  I NPAFDSQTKETLT +   FGS  E+SE+
Sbjct: 1    MNHIKKKYKEMKNIKPFQVKSFIKIFLNCQIVNPAFDSQTKETLTTKAQKFGSTFEVSEK 60

Query: 389  FLKKVTAKSGIVETLLSWANFKQSKDLKKN-DGTKTEDVRGISKLEDANLAGGRNSEQCT 447
            FL ++  K+ I++ ++  A  + +K L K     K + + GI KLEDAN AG +N++ CT
Sbjct: 61   FLDEIIKKTEIIDNVILQAKSRLNKQLSKQLSAKKQQRLLGIDKLEDANDAGTKNADLCT 120

Query: 448  LILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGL 507
            LILTEGDSAK+LAMAG+ +VGRDRFGVFPLRGKLLNVR+AS   ++ N+EI  + KI+GL
Sbjct: 121  LILTEGDSAKSLAMAGIEIVGRDRFGVFPLRGKLLNVRDASIQMIMKNAEIEQLVKIMGL 180

Query: 508  KQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKG 567
            +    Y N KSLRYG +MIMTDQ                            DHDG HIKG
Sbjct: 181  QFNKNYENTKSLRYGSIMIMTDQ----------------------------DHDGHHIKG 212

Query: 568  LLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNA-SS 626
            L+INFI  FWPSL K+  FL +F+TPI+K T K  +  SF+S+ +Y+ +   +  N    
Sbjct: 213  LIINFIEKFWPSLFKMKGFLKQFVTPIIKVT-KGKEFHSFFSIGEYKKF---IAENPRED 268

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            + +KYYKGLGTST  E ++YF N+TLH+K F + D  D + I+L FSK K + RK WL +
Sbjct: 269  YKVKYYKGLGTSTDSEAQQYFSNLTLHRKVFTYSDQTDSDYIDLVFSKTKADQRKDWLSE 328

Query: 687  F---EPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
            +   +  + LD  +  ++Y +FV   L + S++D  RSIPS +DGLKP QRKI+      
Sbjct: 329  YSWKQVEDTLDYSKPNVRYRNFVTDCLAMHSISDNLRSIPSSIDGLKPTQRKIIHTLLNH 388

Query: 744  NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
            +  +E KV+  SG V+ ++ YHHGEQSL  T++ MAQ+F GSNNINLL P GQFGTR+ G
Sbjct: 389  S-KQEYKVSSLSGLVTTYAQYHHGEQSLQQTVVAMAQNFTGSNNINLLLPIGQFGTRSMG 447

Query: 804  GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
            GKDAA ARYI T+LS +T  LF +DD   L+YL+E+G  +EP W+ PI+P VL+NG+EGI
Sbjct: 448  GKDAAQARYISTKLSSLTTKLFNEDDLHTLNYLDEEGYTVEPFWFTPILPLVLINGAEGI 507

Query: 864  GTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVT-YTVTG 922
            GTGWS+ +PN+NPR+I   ++R L GE  E + PWY+GF G+I       AG   Y   G
Sbjct: 508  GTGWSTQVPNFNPREICQQIKRKLRGEEFEELVPWYKGFTGSI------TAGTNQYIAKG 561

Query: 923  -IIEEVNETTLRIKELPIRRWTQDYREFLESIID----QNDSFIRGFRQYSDDTTVDFEV 977
              I+  N   L I E+P ++  ++Y+ F++S ++    +++  I   ++Y     V FE+
Sbjct: 562  SFIQHKNH--LYITEIPPKKSVKEYQAFIQSKMEVAEGKSEPEILDMKEYHAGNKVCFEL 619

Query: 978  FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFY 1037
             +++E +    ++ + K FKL TTI+ +N+ LF+ KG++K+Y    +IL+EF+  R++FY
Sbjct: 620  KVTDEVL----KQDIEKYFKLQTTIAMTNLVLFNEKGLLKRYSNVSEILDEFYQTRIKFY 675

Query: 1038 EKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSK 1097
            + RK+  L   + EL  +++K +FI G+++  I +   K+ ++  +L+  GF    K  K
Sbjct: 676  QLRKEYLLSKYQNELELVQSKSKFIEGMIDNSIQLRGLKKMEMCKKLQSLGFKGISKMEK 735

Query: 1098 SIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEE 1157
                 ++   D     ++            YDYLLSM +   + EK+        +L ++
Sbjct: 736  VKSTRISKDFDADNLEKQ------------YDYLLSMPMWNFSEEKITAFKQQIKQLQDQ 783

Query: 1158 VDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMK 1197
            +  L K TP+ +W +DLD     L+EL K + +  +E +K
Sbjct: 784  ITALNKKTPQQIWSEDLDEF---LEELTKVEEQETQEMIK 820


>gi|27447212|gb|AAL99217.1| kinetoplast and nucleus-associated type II DNA topoisomerase [Bodo
            saltans]
          Length = 1247

 Score =  634 bits (1636), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 424/1202 (35%), Positives = 632/1202 (52%), Gaps = 130/1202 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K S ++H+LLRP+ Y+GS+E     L++ +++   +   T     GL KIFDEI++NA
Sbjct: 5    YKKLSPIDHVLLRPEMYVGSVESQPIQLFLLDDQHSKVEWTTADLNHGLLKIFDEIVLNA 64

Query: 91   ADN---KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
            ADN    +R+P M  + V ID+    I+V N G G+P+   ++  + +PE+IFGHLLTSS
Sbjct: 65   ADNIHNSKRNP-MTFINVTIDETTGQITVENDGAGIPLVKSKDHKLLIPEMIFGHLLTSS 123

Query: 148  NYDDNVKKTTGGRNGYGAKLTNIFSTEFII--ETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            NYD++    + GR+GYGAKLTNI S EFI+   TAD    K+    +T++M    +  + 
Sbjct: 124  NYDNDPDSMSAGRHGYGAKLTNIMSQEFIVYCRTAD----KEVTIRWTDHMRSIDDYQVQ 179

Query: 206  KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
               E  N TK++F PD + F +T L  D+  ++ KR++DLA     SV V  NG  + V 
Sbjct: 180  PTNEAGNLTKITFTPDFSVFGVTKLTKDMYRILHKRILDLAAAF-PSVTVSFNGTALDVG 238

Query: 266  SFAEYVDMYPKSVTRF-----------------------------HERVNERWEICVTLS 296
            SFA YV ++    + F                             H R+    +   ++S
Sbjct: 239  SFASYVKLFEAPASLFSAPTAPVVADGDAAPPPAELNKPFLFEVKHLRLAFIPQPQASVS 298

Query: 297  EGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVN 356
               F   + VNG+ T  GGTHV      + + V A+V +K K   +   N     +  V 
Sbjct: 299  RRTF---AVVNGVVTYSGGTHVQAAQQILTDAVDALVAQKKKEGIIVTVNTFLRYFTTVV 355

Query: 357  AL-IDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
             L    P FDSQ+K  L  +            E L  +T  S   +  +   N K+   L
Sbjct: 356  FLETTQPKFDSQSKVRLVSKVKFPRFPTGQLVEHLATMTFLSDASKGQMDVLN-KELNAL 414

Query: 416  KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVF 475
             +  G +   +  ++KL DA  AGG  SE  TLI+TEGDSAKALA+  LS   R  FGVF
Sbjct: 415  IQVSGKRRPMISTLTKLVDAASAGGSGSEIRTLIVTEGDSAKALALNSLSNEQRKYFGVF 474

Query: 476  PLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAP 535
            PLRGKLLNVR  +  ++    E+ ++   LG++ G  Y + +SLRY  L++MTDQ     
Sbjct: 475  PLRGKLLNVRNNNLARLKKCKELCDLFAALGIEIGRRYTSTESLRYQRLLVMTDQ----- 529

Query: 536  LSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIP-SFLVEFITPI 594
                                   D DG+HIKGLLI+   S WPSLL+    F+  F TP+
Sbjct: 530  -----------------------DADGTHIKGLLISAFESLWPSLLQHSLGFISIFSTPL 566

Query: 595  VKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHK 654
            ++AT + G V SFY++ ++ AWK      AS   IKYYKGLGTST+ EGKEYF+ +  H 
Sbjct: 567  IRATTRGGDVHSFYNVQEFVAWKHDNARLASECFIKYYKGLGTSTTTEGKEYFKQMEQHL 626

Query: 655  KDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPG---NHLDQKEKYIKYSDFVNKELI 711
               +     D + ++  F   +++ RK+WL    P      LD+++K +    FV+KELI
Sbjct: 627  MP-LQVTPSDSQVLDNVFDSDEVQWRKEWL-SAAPAVEEATLDRRQKMLTIPTFVDKELI 684

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEA-KVAQFSGYVSEHSAYHHGEQS 770
             F+ A   R++PS VDGLKP QRKIL+  F+R    E+ KV+Q SGY+SE SA+HHGE S
Sbjct: 685  HFANAGNLRALPSAVDGLKPSQRKILWSCFRRGNANESLKVSQLSGYISEVSAFHHGEMS 744

Query: 771  LASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDD 830
            L  TI+ MAQD+VGSNNINLL+P GQFG+R   G D A+ARYIFT+LSP+ R +FPK+DD
Sbjct: 745  LQQTIIKMAQDYVGSNNINLLEPEGQFGSRQHLGSDHAAARYIFTKLSPLARLIFPKEDD 804

Query: 831  KLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-- 888
            +LL ++ ++G+ +EP +Y+PIIP +LVNGS GIG G++  +  ++P D+V  VRR++   
Sbjct: 805  ELLQFVEDEGKYVEPRFYVPIIPMLLVNGSVGIGFGFACTVQMHHPLDVVTVVRRMMRKN 864

Query: 889  --GEMMEPMHPWYRGFGGT-IEKTASKEAGVTYTVTGIIEEVNETT--------LRIKEL 937
               + +E + PW  G+ G+ ++KT   E G     T  +     TT        +R++EL
Sbjct: 865  TPTQALEGLRPWAVGYSGSVVQKTTVDEEGREVVSTTHVAMGRFTTRKVKGFPVVRVEEL 924

Query: 938  PIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFK 997
            P  R  +  R  +  + ++  S +     YS    VD +V L+ +S    ++  + K F 
Sbjct: 925  PWDRAIEQLRGRVAKLAEE--SKVLRIADYSGANHVDSDVVLAADSFASPRE--IEKDFL 980

Query: 998  LTTTISTSNMHLFDSKGVIKKY-DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLE 1056
            LT+ ++ +N  +++ + V+    ++ E I++  +  RL  Y KRK+ QL  L  +L KL+
Sbjct: 981  LTSNVA-NNAAVYNPEMVLSPLGESVESIVQWHYEQRLAMYTKRKERQLLLLNTQLKKLK 1039

Query: 1057 NKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEEN 1116
            + + F   + +G++  + RK  D                    E  +     E +   EN
Sbjct: 1040 STLTFTETLRSGDL--DFRKMAD--------------------ENALVKQCSELKLHREN 1077

Query: 1117 PEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDA 1176
                       +DYL    +   T   V+ L  D +     +  L   +   LW  DL A
Sbjct: 1078 D---------SFDYLTRRPVTYFTNNNVEKLKRDIEHCKSSIKSLESKSEVELWETDLAA 1128

Query: 1177 LD 1178
             +
Sbjct: 1129 FE 1130


>gi|448825356|ref|YP_007418287.1| DNA topoisomerase 2 [Megavirus lba]
 gi|444236541|gb|AGD92311.1| DNA topoisomerase 2 [Megavirus lba]
          Length = 1072

 Score =  627 bits (1618), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 348/816 (42%), Positives = 479/816 (58%), Gaps = 90/816 (11%)

Query: 196 MGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKV 255
           M  K +P I+  K    +TK+SF PD  KF +  L +D+VAL KKRV DLA  +  + KV
Sbjct: 1   MYTKEKPKITTTKSKTPYTKISFIPDFKKFGLKGLTNDIVALFKKRVYDLA--MTTNAKV 58

Query: 256 ELNGHRVPVKSFAEYVDMYPKSVTRFHERV-----NERWEICVTLS---EGQFQQVSFVN 307
             N   +   +F +Y+D+Y    +  H++V     ++RW++C       + + Q +SFVN
Sbjct: 59  YFNEKIISQNNFTKYIDLYFPEGSE-HKKVLDVTTHDRWKVCAVYDPTDQLEHQNISFVN 117

Query: 308 GIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            I T +GGTHVD V NQV   +   V KK K   VK   +K +L  FV+A I NP FD+Q
Sbjct: 118 SICTSRGGTHVDQVVNQVVKDLKEAVAKKVKGLQVKPTMIKENLIFFVDATIVNPDFDTQ 177

Query: 368 TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
           TKE LT + ++FGS   +++ F+KKV  K+G+V  +++ A  K    L K DG     +R
Sbjct: 178 TKEYLTTKPANFGSNFTVTDIFIKKVI-KTGVVSQIIANAQAKAEASLSKTDGKGRGAIR 236

Query: 428 GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
              KL +A+ AG +   +CTLILTEGDSAK  AM+GL+V+GRD +GVFPL+GK LNVR  
Sbjct: 237 -YEKLYNAHKAGTKEGYKCTLILTEGDSAKTFAMSGLNVIGRDYYGVFPLKGKPLNVRTK 295

Query: 488 SSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
           S  ++  N EI  IKKI+GL+QG  YN++K LRYG +MI+ DQ                 
Sbjct: 296 SPLKIAENEEITAIKKIIGLEQGKVYNDLKELRYGSIMILADQ----------------- 338

Query: 548 WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK---V 604
                      D DG HIKGL++N IH FWPSL K   F+  F TP++KAT   GK   V
Sbjct: 339 -----------DVDGYHIKGLIMNLIHRFWPSLAKYEGFIQSFATPLLKATKGKGKTRKV 387

Query: 605 LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---- 660
           + F +   +E WK+    +   W+IKYYKGLGTST  E +E F ++   +  + WE    
Sbjct: 388 VEFTNPQSFEEWKQK-NNDGKGWTIKYYKGLGTSTQAEAQECFTDLDKKRIKYFWESKRV 446

Query: 661 -----DDQDG-------------------------------EAIELAFSKKKIEARKKWL 684
                D+++                                +AI LAF KK+   RK W+
Sbjct: 447 NNIEEDEEESKPKPKVKSEFIDEESDVISEIYKPKNKDICEDAITLAFDKKRENDRKIWV 506

Query: 685 LQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRN 744
             + P N++D  +K + Y DF+++ELI FS+ D  RSIP+++DG KP QRK+ + S +  
Sbjct: 507 NTYNPNNYIDNAQKRVSYYDFIHQELISFSVDDNLRSIPNIMDGFKPSQRKVFYGSVEEG 566

Query: 745 FIKE-AKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
             KE  KV++  G VS+ + YHHGEQSL STI+ MAQ++VGSNNINLL PNGQFGTR  G
Sbjct: 567 IYKEEIKVSELQGAVSKRTKYHHGEQSLTSTIVNMAQNYVGSNNINLLMPNGQFGTRMSG 626

Query: 804 GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
           GKD+ASARYIFT+L  + + +F + D  +L    ED + IEP +Y P+IP +LVNG+EGI
Sbjct: 627 GKDSASARYIFTQLDELAKKIFIEHDFDILHLQYEDNKMIEPQYYAPVIPMILVNGTEGI 686

Query: 864 GTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGI 923
           GTG+S+ I   NPRDI  N+ R+LN E  + M PWYR F GTIEK  + +    Y     
Sbjct: 687 GTGYSTKIAPCNPRDIYDNILRILNDEKTKTMKPWYRHFTGTIEKIDNNK----YVSRAK 742

Query: 924 IEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS 959
            E +   T+ I +LPI  WT +Y+ FL+++IDQ  S
Sbjct: 743 YEIIGNDTIHITDLPIGTWTDNYKAFLDNLIDQGAS 778



 Score = 82.8 bits (203), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 34/221 (15%)

Query: 963  GFRQYSDDTT---VDFEVFLSEESMMRTKQEGLLKK-FKLTTTISTSNMHLFDSKGVIKK 1018
              + Y++D T   + F +      +    + G L    KL + I  +NMHLF+  G IKK
Sbjct: 839  AIKTYTEDCTQIRISFTINFHPGKLSELIKTGKLDDGLKLVSPIQLTNMHLFNEYGKIKK 898

Query: 1019 YDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRT 1078
            YD+  +IL  F  +RL+ Y+KRK   L     E+  L+ KV+FI+ V+ G+I++    ++
Sbjct: 899  YDSYGEILRNFSKVRLDLYQKRKDHLLGKWRKEMDILKWKVKFIMYVIEGKIIIFKNGKS 958

Query: 1079 DLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQ-SIDYDYLLSMAIG 1137
                E+ QK                        E  E P+ + G + +  Y+Y+ S  + 
Sbjct: 959  KKKDEIMQK-----------------------LEELEFPKFITGTEKNASYNYITSTGLF 995

Query: 1138 TLTLEKVQGL---LADRDKLNEEVDDLRKATPESLWVKDLD 1175
             LT E+V+ L   LAD+    EEV  L   TP+ +W+++L+
Sbjct: 996  NLTHEEVERLKQQLADK---KEEVAILESKTPKDIWIEELE 1033


>gi|443921924|gb|ELU41451.1| DNA topoisomerase 2 [Rhizoctonia solani AG-1 IA]
          Length = 1447

 Score =  627 bits (1617), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 301/523 (57%), Positives = 394/523 (75%), Gaps = 16/523 (3%)

Query: 24  NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
           +K   EMY+K +QLEHIL RPDTYIGSIE  +Q +W ++EE+K M+ R + +VPGL+KI 
Sbjct: 125 DKGASEMYEKLTQLEHILKRPDTYIGSIESISQKMWTFDEETKRMVFREVKFVPGLFKIV 184

Query: 84  DEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
           DEILVNAADNK  D  MD +KV ID E  LISV+N+G G+P+E+H +E +++PE+IFGHL
Sbjct: 185 DEILVNAADNKINDASMDTIKVEIDAEEGLISVYNNGKGIPIEVHSKEKIWIPEMIFGHL 244

Query: 144 LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
           LTSSNYDD+ KK TGGRNGYGAKLTNI+STEF +ETAD K  +KYKQ + NNM K  +  
Sbjct: 245 LTSSNYDDDEKKLTGGRNGYGAKLTNIYSTEFTVETADKKTEQKYKQTWMNNMSKPGKAK 304

Query: 204 ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
           I+K   G+ +TKVSF+PD  +F M  ++ D+ +L+K+RV D+AG + K+VKV LNG R+ 
Sbjct: 305 ITKNPRGEEFTKVSFRPDFKRFGMEGMDHDIASLLKRRVYDMAGTV-KNVKVFLNGERIK 363

Query: 264 VKSFAEYVDMYPKSV------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
           +K+F +YV+MY  S             T   E ++ RWE+   LS+G FQQ+SF N IAT
Sbjct: 364 IKNFKQYVEMYVNSAKENAGEGEGPKPTVIFEEISPRWEVGFALSDGSFQQISFANSIAT 423

Query: 312 IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
            KGGTHV+ +A Q++ +++A + KKNK A VK   +KNH+W+FVN+LI+NP FDSQTKE 
Sbjct: 424 TKGGTHVNMIAEQISKNLIAGIEKKNKGAKVKPQTIKNHMWIFVNSLIENPTFDSQTKEW 483

Query: 372 LTLRQSSFGSKCELSEEFLKKVT---AKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRG 428
           LTL  S FGS+  +SE+F+K+V+   AKSGI++ +LSWA FK  ++ KK DGTK   + G
Sbjct: 484 LTLPSSKFGSRPHVSEDFMKRVSTTVAKSGIIDNVLSWAKFKADQENKKTDGTKRTRLTG 543

Query: 429 ISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREAS 488
           I+KL DAN AGGR++ +CTLILTEGDSAK+LA AGLSV GR+ FG+FPLRGKLLNVREA+
Sbjct: 544 IAKLSDANNAGGRHASECTLILTEGDSAKSLAEAGLSVAGRNNFGIFPLRGKLLNVREAT 603

Query: 489 SNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQV 531
            +QV+ N+EI  IK+I+GLK GV Y +V SLRYG +MIMTDQV
Sbjct: 604 HDQVMKNAEIQAIKQIMGLKHGVAYKDVGSLRYGSIMIMTDQV 646



 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 290/611 (47%), Positives = 399/611 (65%), Gaps = 30/611 (4%)

Query: 591  ITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNI 650
            I  +     K  + ++F+++P+++ W E        W +KYYKGLGTS   + +EYF  +
Sbjct: 639  IMIMTDQVTKGNQKINFFTIPEFQKWNEE-NNKDGKWYVKYYKGLGTSKDSDAREYFGAM 697

Query: 651  TLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKEL 710
              H   F   ++ + E I++AF+KKK + RK WL QF+PG  +D   + I YSDF+N+EL
Sbjct: 698  EKHMIPFAKTEEGERELIDMAFNKKKADDRKDWLRQFKPGTFIDHSVQEITYSDFINREL 757

Query: 711  ILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQS 770
            ILFSMAD  RSIPS+VDGLKPGQRK++F +FKR    E KVAQ  GY+SE +AYHHGEQS
Sbjct: 758  ILFSMADNIRSIPSVVDGLKPGQRKVIFGTFKRKLKNEIKVAQLVGYISEKTAYHHGEQS 817

Query: 771  LASTILGMAQDFVGSNNINLLQPNGQFGTRN------QGGKDAASARYIFTRLSPITRFL 824
            L  TI+ +AQ+FVGSNNINLL+P GQFGTR+      QGGKDAASARYIFT +  ITR +
Sbjct: 818  LTMTIVNLAQNFVGSNNINLLKPEGQFGTRSQCTYFIQGGKDAASARYIFTSIPHITRTI 877

Query: 825  FPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVR 884
            F   DD LL+YL +D   IEP WYMPI+P +L+NG++GIGTGWS+ IPNYNPRDIV N++
Sbjct: 878  FHPHDDALLNYLKDDNDSIEPEWYMPILPVILINGADGIGTGWSTSIPNYNPRDIVDNIK 937

Query: 885  RLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQ 944
            RL+NGE   PM PWYRGF G IEK    +    Y V+GI+E   +  + IKELPIR WTQ
Sbjct: 938  RLMNGEPQVPMFPWYRGFKGNIEKIGEDK----YKVSGIVERTAK-GVDIKELPIRVWTQ 992

Query: 945  DYREFLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTT 1001
             Y+E LE  +    ++  F++ + ++    +V FE+ ++E+ + + + EG  K FKL   
Sbjct: 993  SYKEQLEEWLVGTQKSPPFVKDYHEHHTTRSVYFELTVAEKDLEKAETEGFEKFFKLVAQ 1052

Query: 1002 ISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRF 1061
            ISTSNM  FD+ G IKKY++PE+ILEEF+ +RL +Y+KRK+   + LE +  KL N+ RF
Sbjct: 1053 ISTSNMICFDANGKIKKYNSPEEILEEFYALRLSYYQKRKQHLCDELERQYEKLSNQARF 1112

Query: 1062 ILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVN 1121
            +  ++  E+VV+N+K+ DL  ELR+  F PFPK  K+ E   +G  ++  E EE+  V  
Sbjct: 1113 VNMIIKKELVVSNKKKADLCAELRELKFRPFPKVRKAKE---SGENEDAVEEEEDEPV-- 1167

Query: 1122 GVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL 1181
            G  S DYDYLL M         V+ L+ +++    E ++L K     LW +DL+      
Sbjct: 1168 GANS-DYDYLLGM---------VEKLINEQNAKEAEWNELLKRKAVDLWNEDLEEFLKAW 1217

Query: 1182 DELDKSDARAE 1192
            D++ + DA AE
Sbjct: 1218 DDMLEEDAEAE 1228


>gi|403180025|ref|XP_003888499.1| DNA topoisomerase II [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|375165610|gb|EHS62949.1| DNA topoisomerase II [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 649

 Score =  625 bits (1613), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 312/553 (56%), Positives = 395/553 (71%), Gaps = 36/553 (6%)

Query: 8   PLTTSNNANVVGPT-APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK 66
           P TT+N     GP  +  KT  E YQK SQLEH+L RPDTYIGS+E   Q +WI+++E K
Sbjct: 92  PPTTTN-----GPAGSKKKTASETYQKLSQLEHVLKRPDTYIGSVEAIRQFMWIFDKEKK 146

Query: 67  TMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE 126
           TM+++ IS+VPGLYKI DEILVNAADNKQRD  MD +KV ID E ++ISV N+G G+P+E
Sbjct: 147 TMVNKEISFVPGLYKIVDEILVNAADNKQRDDSMDTLKVTIDSEKNIISVMNNGKGIPIE 206

Query: 127 IHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLK 186
           IH+ E +Y+PELIFGHLL  SN+DD  KKTTGGRNGYGAKL NI+STEFI+E AD +  K
Sbjct: 207 IHETEQIYIPELIFGHLLAGSNFDDEEKKTTGGRNGYGAKLANIYSTEFIVEAADKQTAK 266

Query: 187 KYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNM---THLEDDVVALMKKRVV 243
           KYKQ+F NNM  K +P I++ K+G+ +TK+SFKPDL KFN+     L  D+ AL+ KRV 
Sbjct: 267 KYKQIFKNNMSVKEKPKITENKKGEEYTKISFKPDLVKFNLPAENGLAGDMEALISKRVY 326

Query: 244 DLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR----------------------- 280
           D+AG L ++VKV LN  R+ +  F +YV+MY   V                         
Sbjct: 327 DMAGTL-RNVKVWLNDERIKLTGFKKYVEMYTSGVNEAIKGSAAKALEAPGSPGNGATKT 385

Query: 281 --FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK 338
              +E   +RWEI    S+GQFQQVSF N IAT KGGTHV+++  Q+   ++  VNKK  
Sbjct: 386 PIIYEECGKRWEIAFAPSDGQFQQVSFCNSIATTKGGTHVEHIVKQLVEKIIESVNKKKA 445

Query: 339 NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSG 398
              +K + V+NHLWVFVN LI+NP FDSQTKE +TL  S FGSKC ++EEF+KKV  KSG
Sbjct: 446 KLTLKPYQVRNHLWVFVNCLIENPTFDSQTKENMTLGMSKFGSKCVMTEEFMKKVM-KSG 504

Query: 399 IVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKA 458
           ++++++ +A FK+   LKK DG+K   + GI KLEDAN AG R +  CTLILTEGDSAK+
Sbjct: 505 VIDSVMDFAKFKEEAALKKTDGSKRSRITGIVKLEDANNAGTRKAADCTLILTEGDSAKS 564

Query: 459 LAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKS 518
           LA+AGLSV+GRD +GVFPLRGKLLNVREAS  Q+LNN+EI +IK+I+GL+QG +Y +  S
Sbjct: 565 LAVAGLSVIGRDNYGVFPLRGKLLNVREASGAQLLNNAEIQHIKQIMGLQQGKKYASRDS 624

Query: 519 LRYGHLMIMTDQV 531
           LRYG LMIMTDQ 
Sbjct: 625 LRYGSLMIMTDQA 637


>gi|135994|sp|P27570.1|TOP2_CRIFA RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|11001|emb|CAA42182.1| kinetoplast-associated type II DNA topoisomerase (toptIImt)
            [Crithidia fasciculata]
          Length = 1239

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 406/1191 (34%), Positives = 614/1191 (51%), Gaps = 119/1191 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            YQK + ++H+LLRP+ Y+GSIE  +  +++++     M+  ++    GL KI DEIL+NA
Sbjct: 7    YQKLTPIDHVLLRPEMYVGSIETQSIPMFVFDPAKGKMVWESMQVNQGLLKIVDEILLNA 66

Query: 91   ADN---KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
            ADN     R  +M  + + I    +++ V N G G+P+   +E  +Y+PE++FGHLLTSS
Sbjct: 67   ADNINNSVRGARMTYISIKISDSGEIM-VENDGAGLPIVKSKEHKMYIPEMVFGHLLTSS 125

Query: 148  NYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKC 207
            NY+++   TT GR+GYGAKLTNI ST+F +      R  ++   +T++M   + P +S  
Sbjct: 126  NYNNDASSTTAGRHGYGAKLTNILSTKFSVVCRTAGR--EFHMSWTDHMRMATTPRVSNV 183

Query: 208  KEGD-NWTKVSFKPDLAKFNM--THLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
               + N T+V+F PD A F      +  D+  ++ KR++DLA    K ++V LN      
Sbjct: 184  DPKEKNVTRVTFMPDYAHFGFPTAAISLDMKRVLHKRIMDLAAMFSK-IEVRLNNVPFGF 242

Query: 265  KSFAEYVDMY----------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKG 314
            ++F +Y  +Y          P+     H   N        L++   + V  VNG+ T  G
Sbjct: 243  QTFNDYARLYSLPGADGAMPPEPFV--HTGPNGSIAFVPQLTQSPKRIVGVVNGVVTYNG 300

Query: 315  GTHVDYVANQVANHVMAVVNKKNKNANVKAHN-VKNHLWVFVNALIDNPAFDSQTKETLT 373
            GTH       +   + ++     K+  V   N V  H  V V  +   P FDSQ+K  L 
Sbjct: 301  GTHCTSAMEILETGLDSLSRSLKKDGKVIDTNRVARHFTVLVFLIQSQPKFDSQSKARLV 360

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT-----KTEDVRG 428
                S  +   +    L +  A    +E  ++  + + + +L K  GT         +  
Sbjct: 361  ----STVTMPRVPRTALDQYLAAMPFLEAHMNSMDDQLAAELNKEIGTGKRLSSRSLISS 416

Query: 429  ISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREAS 488
            I+KL DA  +        TLI+TEGDSAKALA+  LS   +   GVFPLRGKLLNVR  +
Sbjct: 417  ITKLVDATSSRSDGKNIRTLIVTEGDSAKALALNSLSSEQKKFCGVFPLRGKLLNVRNKN 476

Query: 489  SNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAW 548
              ++    E+ ++   LGL+ G  Y +   LRY  L++MTDQ                  
Sbjct: 477  LKRLKTCKELQDLFLALGLELGKTYKSPAELRYQRLLVMTDQ------------------ 518

Query: 549  ITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVK--ATNKNGKVL 605
                      D DGSHIKGL+IN   S WPSLL+  P ++  F TPIVK     K  +V+
Sbjct: 519  ----------DADGSHIKGLVINAFESLWPSLLQHNPGYISLFSTPIVKIKVNGKAKEVV 568

Query: 606  SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG 665
            +F+S  D+  W+ +     + +S KYYKGLGTST+ EGKEYF ++  +    V E  +D 
Sbjct: 569  AFHSFRDFHRWQRA--NPNARYSAKYYKGLGTSTTAEGKEYFADMERNVMRLVVEP-KDH 625

Query: 666  EAIELAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
              ++  F   ++E RK+W+ +   F+    +D+ +K +   DFV+KE++ F++    R+I
Sbjct: 626  RLLDSVFDSAEVEWRKEWMSKANAFQGEVDIDRSKKLLTIGDFVHKEMVHFALVGNARAI 685

Query: 723  PSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDF 782
            P  VDGLKP QRKIL+   KR+  + AKVAQ SGY+SE S++HHGE SL  TI+ MAQ+F
Sbjct: 686  PHCVDGLKPSQRKILWAMLKRHSSEAAKVAQLSGYISEVSSFHHGEASLQETIVKMAQNF 745

Query: 783  VGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQ 842
             G NNINLL P GQFG+R Q G D A+ RYIFT+LS   R LFP+DDD LLDY++E+G  
Sbjct: 746  TGGNNINLLVPEGQFGSRQQLGNDHAAPRYIFTKLSRFARLLFPEDDDPLLDYIDEEGTM 805

Query: 843  IEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHPW 898
            +EP  Y+PI+P +L NG+ GIG G+++ IP+++P D+ A VR ++NGE    ++  + PW
Sbjct: 806  VEPNHYVPILPLLLCNGAVGIGFGFATNIPSFHPLDVSAAVRAMINGESAKQVVRNLVPW 865

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND 958
              GF GT+ +   KE    Y   G         L + ELP     + +R  + S+   + 
Sbjct: 866  AVGFQGTVRRGPEKE----YIAVGKYTAHRNGRLHVSELPWMTSIEAFRSHISSLASSD- 920

Query: 959  SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKK 1018
              ++    YS    +D ++ + E SM  T          L+  I   N  +F   G +  
Sbjct: 921  -VVQRIADYSGANHIDIDLIVREGSM--TTWAECETDLALSQRIYI-NGTVFSPDGTLSP 976

Query: 1019 YDTP-EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
             D     +L+  +  RL+ Y++R+  Q+  LE++L +L++  +F+     G I       
Sbjct: 977  IDADLSPVLQWHYDRRLDLYKRRRTRQIGLLEMDLARLQSTRKFVEHFRQGHI------- 1029

Query: 1078 TDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLLSMA 1135
             D L                        ATD+T        V  G+  +D  YDY+L   
Sbjct: 1030 -DFL-----------------------AATDDTLTKT---CVKLGLVRVDDGYDYILKKP 1062

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
            I   T    + L AD  K  + +  L++ TP  +W+ DLD  D    E ++
Sbjct: 1063 ITFYTKTSTEKLQADIKKTQDSIAVLKQTTPVKMWLTDLDKFDKTFQEYER 1113


>gi|343474588|emb|CCD13796.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 1227

 Score =  618 bits (1594), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 402/1190 (33%), Positives = 616/1190 (51%), Gaps = 121/1190 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + +EH+L RP+ YIGSI+     +++Y+EE   M+  T+    GL KI DEIL+NA
Sbjct: 7    YKKLTPIEHVLTRPEMYIGSIDTTPTGMFLYDEEKGHMVWETVKLNHGLLKIVDEILLNA 66

Query: 91   ADN-KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            +DN   R  +M  ++V I    + I++ N G G+P+   +E  +Y+PE++FGHLLTSSNY
Sbjct: 67   SDNISNRSARMTYIRVNITDVGE-ITIENDGAGIPIVRSREHKLYIPEMVFGHLLTSSNY 125

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DD+ +    GR+GYGAKLTNI S  F +      R  ++   + ++M K + P +S    
Sbjct: 126  DDDNQNAVAGRHGYGAKLTNILSLNFSVSCRTNGR--EFHMSWQDHMKKATAPRVSNVGS 183

Query: 210  GD-NWTKVSFKPDLAKFNMTH--LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
             + N T+V F PD  +F M    +  D+  ++ KR++DL+     ++++ LNG     KS
Sbjct: 184  KERNITRVKFLPDYERFGMKEKKISSDMKRVLYKRIMDLSAMF-PNIQMTLNGTSFGFKS 242

Query: 267  FAEYVDMYPKSVTRFHE----RVNERWEICV----TLSEGQFQQVSFVNGIATIKGGTHV 318
            F EY  +Y     R  +     V E    CV    +++ G  +    VNG+ T  GGTH 
Sbjct: 243  FKEYASLYSTPTIRGEQPPPPYVYESRSGCVAFIPSVTPGVRRMFGVVNGVVTYNGGTHC 302

Query: 319  DYVANQVANHVMAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            +  A ++    +  V K  K +N  + ++ V  H  + V  +   P FDSQ K  L    
Sbjct: 303  N-AAQEILVGCLDGVEKELKKENKVMDSNRVLRHFTILVFLVQVQPKFDSQNKARLI--- 358

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED-----VRGISK 431
             S  +   +  + + K   +   +E+ +S    + +++L +  GT         +  I+K
Sbjct: 359  -SAPTMPRVPRQDVMKYLLRMPFLESHVSTITGQLAQELNREIGTGRRMSSKALLTSITK 417

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            L DA           TLI+TEGDSAKALA   LS   +   GVFPLRGKLLNVR  +  +
Sbjct: 418  LVDATSTRRDPKNIRTLIVTEGDSAKALAQNSLSSDQKRYTGVFPLRGKLLNVRNKNLKR 477

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            + N  E+  +   LGL+   +Y +   LRY  +++MTDQ                     
Sbjct: 478  LRNCKELQELFCALGLELDKDYKDADELRYQRILVMTDQ--------------------- 516

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLL-KIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                   D DGSHIKGL+IN   S WPSLL + P F+  F TPIVKA  ++  V+SF+S+
Sbjct: 517  -------DADGSHIKGLVINAFESLWPSLLVRNPGFISIFSTPIVKARLRDKSVVSFFSL 569

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
             ++  W+++   +  S++ KYYKGLGTST+ EGKEYF+++  H    +  D  D + ++ 
Sbjct: 570  KEFHKWQKA--NHNVSYTCKYYKGLGTSTTVEGKEYFKDMEKHTMRLLV-DRNDHKLLDN 626

Query: 671  AFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVD 727
             F  +++E RK W+ +   F     +D+ +K +   DFV+KE++ F++    R++   VD
Sbjct: 627  VFDSQEVEWRKDWMTKANAFTGEVDIDRSKKTLTVPDFVHKEMVHFALVGNARALAHSVD 686

Query: 728  GLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNN 787
            GLKP QRKIL+   +R+    AKVAQ SGY+SE SA+HHGE SL  T++ MAQ+F G NN
Sbjct: 687  GLKPSQRKILWALLRRSGNDAAKVAQLSGYISEASAFHHGESSLQETMIKMAQNFTGGNN 746

Query: 788  INLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
            INLL P GQFG+R Q G D A+ RYIFT+LS + R LFP +DD LLDY+ E+ QQ+EP  
Sbjct: 747  INLLVPEGQFGSRQQLGNDHAAPRYIFTKLSKVARLLFPSEDDPLLDYVVEEDQQVEPNH 806

Query: 848  YMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHPWYRGFG 903
            Y+PI+P +L NGS GIG G++S IP ++P D+ A VR ++NGE    ++  + PW  GF 
Sbjct: 807  YVPIVPLLLCNGSVGIGFGFASNIPPFHPLDVTAAVRAMINGESAKTVVRRLVPWAVGFQ 866

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID-QNDSFIR 962
            G I +    E    +   G         + + ELP   WT     F + + +      + 
Sbjct: 867  GEIRRGPEDE----FIAVGSYNYCKGNRVHVTELP---WTCSVEAFRDHVSNLARKDIVH 919

Query: 963  GFRQYSDDTTVDFEVFLSEESMMRT----KQEGLLKKFKLTTTISTSNMHLFDSKGVIKK 1018
                Y     +D +V +S+ SM+       + GL ++  +  T+       F   G +  
Sbjct: 920  RIADYCGANHIDIDVEVSQGSMLTYAECESELGLTQRIHINGTV-------FSPNGTLSP 972

Query: 1019 Y-DTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
              D    +L+  +  R + Y++R++  L   E EL + ++ ++F+     G I   N   
Sbjct: 973  LEDDLAPVLQWHYDRRFDLYKRRRQRNLMLQEQELAREKSTLKFVQHFRAGNIDFANATE 1032

Query: 1078 TDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID-YDYLLSMAI 1136
            T L                                 E+  + +N V+  D YDY+L   I
Sbjct: 1033 TTL---------------------------------EKICQKLNLVRVDDSYDYILRKPI 1059

Query: 1137 GTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
               T   ++ LL    +    ++ L+K TP  LW+++LD  D    E +K
Sbjct: 1060 TFYTKTSLENLLKKIAETERRIETLKKTTPVQLWLQELDQFDRFFQEHEK 1109


>gi|26328987|dbj|BAC28232.1| unnamed protein product [Mus musculus]
          Length = 1028

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 399/1010 (39%), Positives = 562/1010 (55%), Gaps = 114/1010 (11%)

Query: 492  VLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAW 548
            ++ N+EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                  
Sbjct: 1    IMENAEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ------------------ 42

Query: 549  ITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFY 608
                      D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FY
Sbjct: 43   ----------DQDGSHIKGLLINFIHHNWPSLLRH-RFLEEFITPIVKVS-KNKQEIAFY 90

Query: 609  SMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAI 668
            S+P++E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI
Sbjct: 91   SLPEFEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAI 149

Query: 669  ELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMA 716
             LAFSKK+++ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +
Sbjct: 150  SLAFSKKQVDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQSTSYLTYNDFINKELILFSNS 209

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
            D +RSIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+
Sbjct: 210  DNERSIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTII 269

Query: 777  GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
             +AQ+FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LSP+ R LFP  DD  L +L
Sbjct: 270  NLAQNFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPKDDHTLRFL 329

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
             +D Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R++V N+RRLL+GE   PM 
Sbjct: 330  YDDNQRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLLDGEEPLPML 389

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII- 954
            P Y+ F GTIE+ AS +    Y + G +  ++ TT+ I ELPIR WTQ Y+E  LE ++ 
Sbjct: 390  PSYKNFKGTIEELASNQ----YVINGEVAILDSTTIEISELPIRTWTQTYKEQVLEPMLN 445

Query: 955  --DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDS 1012
              ++  S I  +R+Y  DTTV F + ++EE +   ++ GL K FKL ++++ ++M LFD 
Sbjct: 446  GTEKTPSLITDYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQSSLTCNSMVLFDH 505

Query: 1013 KGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVV 1072
             G +KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+IV+
Sbjct: 506  VGCLKKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVI 565

Query: 1073 NNRKRTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDY 1130
             N+ + +L+  L Q+G+   P K  K  +  V    +  E   E     +  ++   ++Y
Sbjct: 566  ENKPKKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDTETSTSDSAAEAGPTFNY 625

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
            LL M +  LT EK   L   R++  +E++ L++ +P  LW +DL     +L+ ++  + +
Sbjct: 626  LLDMPLWYLTKEKKDELCKQRNEKEQELNTLKQKSPSDLWKEDLAVFIEELEVVEAKEKQ 685

Query: 1191 AEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKV-VKPKG 1249
             E+  +  K         ++ A   P           + R    + ++    K   + K 
Sbjct: 686  DEQVGLPGKAGKAKGKKAQMCADVLP-----------SPRGKRVIPQVTVEMKAEAEKKI 734

Query: 1250 RAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTK------LEP----------SPD 1293
            R  +K    E    ++  E   L+QR+ K  ++    K       +P          S  
Sbjct: 735  RKKIKSENVEGTPAEDGAEPGSLRQRIEKKQKKEPGAKKQTTLPFKPVKKGRKKNPWSDS 794

Query: 1294 QSGVMETEK-VQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIII---DDDEAF------- 1342
            +S V   E  V VP ++KE  +R+AA K   TV+    ED   +   D+DE F       
Sbjct: 795  ESDVSSNESNVDVPPRQKE--QRSAAAKAKFTVDLDSDEDFSGLDEKDEDEDFLPLDATP 852

Query: 1343 -EIAAPEEGKKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKP----- 1396
             +   P +  K   K  G+S +    ++ K   PA    P A       TE  KP     
Sbjct: 853  PKAKIPPKNTKKALKTQGSSMSVDLESDVKDSVPASPGVPAADFPAE--TEQSKPSKKTV 910

Query: 1397 --------AESSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSPSTS 1438
                    ++SS      K RA+P   KS S L  A   E+P+ +    S
Sbjct: 911  GVKKTATKSQSSVSTAGTKKRAAPKGTKSDSALS-ARVSEKPAPAKAKNS 959


>gi|71666676|ref|XP_820295.1| mitochondrial DNA topoisomerase II [Trypanosoma cruzi strain CL
            Brener]
 gi|70885633|gb|EAN98444.1| mitochondrial DNA topoisomerase II, putative [Trypanosoma cruzi]
          Length = 1231

 Score =  617 bits (1590), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 399/1192 (33%), Positives = 628/1192 (52%), Gaps = 123/1192 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + ++H+L+RP+ Y+GS++  + ++++++ E   M+  ++    GL KI DEIL+NA
Sbjct: 7    YKKLTPIDHVLIRPEMYVGSVDTSSSSMFVFDHEKGRMVWESLKVNHGLLKIVDEILLNA 66

Query: 91   ADN-KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            +DN   +  +M  ++V I +  + I++ N G G+P+   +E  +Y+PE++FGHLLTSSNY
Sbjct: 67   SDNIANKGGRMTYIRVHITEAGE-ITIENDGAGIPIVRSKEHKLYIPEMVFGHLLTSSNY 125

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DD  +    GR+GYGAKLTNI S  F +      + K++   + ++M + + P +S    
Sbjct: 126  DDTSQNAVAGRHGYGAKLTNILSHRFSV--CCRTKGKEFHMSWHDHMRRATAPRVSNVDP 183

Query: 210  GD-NWTKVSFKPDLAKFNM--THLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
             + N T+V F PD  +F +    +  D+  ++ KR++DLA     S+++ LNG     KS
Sbjct: 184  RERNLTRVKFLPDYERFGLDANKISHDMKRVLHKRIMDLAAMF-PSIEISLNGVPFAFKS 242

Query: 267  FAEYVDMYPKSVTR--------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
            FA+Y  +Y    +          +E  N       +L+ G  +    VNG+ T  GGTH 
Sbjct: 243  FADYAMLYSSPTSSGEMPPAPFVYESRNGAIAFIPSLTAGTRRIFGVVNGVVTHNGGTHC 302

Query: 319  DYVANQVANHVMAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            +  A +V    +  V K  K  N  +  + V  H  + V  +   P FDSQ K  L    
Sbjct: 303  N-AAQEVLQSSLENVEKALKKDNKVIDTNRVLRHFTILVFLVQVQPKFDSQNKARLV--- 358

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TKTEDVRGISK 431
             S  +   + ++ L     +   +E  ++    + +++L K  G     +    +  I+K
Sbjct: 359  -SVPTMPRVPKQELMDFLLRMPFLEAHVNTVTGQLAQELNKEMGAGRRMSSKSLISSITK 417

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            L DA           TLI+TEGDSAKALA   LS   +   GVFPLRGKLLNVR  +  +
Sbjct: 418  LVDATTTRRDPRFVRTLIVTEGDSAKALAQNSLSSDQKRYTGVFPLRGKLLNVRNKNLKR 477

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            + N  E+  +   LGL+ G  Y + + LRY  L++MTDQ                     
Sbjct: 478  LKNCKELQELFCALGLELGKIYKDAEELRYQRLLVMTDQ--------------------- 516

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLL-KIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                   D DGSHIKGL+IN   + WPSLL + P F+  F TPIVK   ++    SF+S+
Sbjct: 517  -------DADGSHIKGLVINAFEALWPSLLNRNPGFISIFSTPIVKVRLRDKSTHSFFSL 569

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
             ++  W+++ G    S++ KYYKGLGTST+ EGKEYF+++  H    V E + D + ++ 
Sbjct: 570  KEFHKWQKTHGN--VSYTAKYYKGLGTSTTAEGKEYFKDMDKHTMRLVVERN-DHKLLDS 626

Query: 671  AFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVD 727
             F  +++E RK W+ +   +     +D+ +K +   DFV+KE++ F++A   R++   VD
Sbjct: 627  VFDSQEVEWRKDWMTKANAYTGEVDIDRSKKTLTVPDFVHKEMVHFALAGNARALAHAVD 686

Query: 728  GLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNN 787
            GLKP QRKIL+   +R+  + AKVAQ SGY+SE SA+HHGE SL  TI+ MAQ+F G NN
Sbjct: 687  GLKPSQRKILWAIMRRSGNESAKVAQMSGYISEVSAFHHGEMSLQETIIKMAQNFTGGNN 746

Query: 788  INLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
            INLL P GQFG+R Q G D A+ARYIFT+LS + R LFP +D+ LLDY+ E+GQQ+EP  
Sbjct: 747  INLLIPEGQFGSRQQLGNDHAAARYIFTKLSSLARILFPSEDEPLLDYVTEEGQQVEPNH 806

Query: 848  YMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHPWYRGFG 903
            Y+PI+P +L NGS GIG G++S IP ++P D+ A VR ++NGE    ++  + PW  G+ 
Sbjct: 807  YVPILPLLLCNGSVGIGFGFASNIPPFHPLDVSAAVRSMINGEAAKVVVRRLVPWAVGYQ 866

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI-IDQNDSFIR 962
            G + +    E    +   G  +   +  + + E+P   WT     F + I +  +   ++
Sbjct: 867  GEVRRGPEGE----FIAAGSYQYYVDGRVHVTEIP---WTLSIEAFRDHISVLASKDVVQ 919

Query: 963  GFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTP 1022
                YS    VD ++ L+  +M  T       +  LT  I   N  +F   GV+    TP
Sbjct: 920  RIADYSGANHVDIDLELTNGAM--TTYAECESELSLTQRIYI-NGTVFSPTGVL----TP 972

Query: 1023 EQ-----ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
             +     +L+  +  RL+ Y+KR++  L  LE EL + ++ ++F+     G+I + N   
Sbjct: 973  LEGDLAPVLQWHYDRRLDLYKKRRQRNLGLLEAELAREKSTLKFVTHFREGKIDIVN--- 1029

Query: 1078 TDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLLSMA 1135
                                        ATD++     +     G+  +D  YDY+L   
Sbjct: 1030 ----------------------------ATDDSLAKTCSKL---GMVRVDDSYDYVLRKP 1058

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKS 1187
            I   T   ++ L     +  + +D L+K TP  +W+ +LD  D   +E +K+
Sbjct: 1059 ITFYTKTSLENLNRKIGETEKRIDKLKKTTPVQMWLDELDRFDRAFEEHEKT 1110


>gi|37731960|gb|AAO23340.1| type II topoisomerase [Strigomonas culicis]
          Length = 1230

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 419/1210 (34%), Positives = 636/1210 (52%), Gaps = 119/1210 (9%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEI---L 87
            Y+K S ++H+LLRP+ Y+GSIE    ++++++     M   ++    GL KI DEI   L
Sbjct: 7    YKKLSPIDHVLLRPEMYVGSIETQPVSMFVFDPVKACMAWESMQVNHGLLKIVDEIPAQL 66

Query: 88   VNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
            V+  +N +   KM  +K+ +    + I++ N G G+P+  ++E  +Y+PE++FGHLLTSS
Sbjct: 67   VDNINNAKGRRKMTFIKITMSDLGE-ITIENDGAGIPIVKNKEHKIYIPEMVFGHLLTSS 125

Query: 148  NYDDNVKKTTGGRNGYGAKLTNIFSTEF-IIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            NYD++   TT GR+GYGAKLTNI ST+F ++   +GK   +++  +T++M K + P +S 
Sbjct: 126  NYDNDESSTTAGRHGYGAKLTNILSTQFSVLCRTEGK---EFRMSWTDHMRKATAPRVSS 182

Query: 207  CKEGD-NWTKVSFKPDLAKFNM--THLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            C + + N T++ F PD A F      +  D+  ++ KR++DLA     S++V +NG    
Sbjct: 183  CDKAESNLTRIKFMPDYAHFGFKNNQISLDMKRVLHKRIMDLAAMF-PSIQVSINGVPFA 241

Query: 264  VKSFAEYVDMY--PKSVTRF------HERVNERWEICVTLSEGQFQQVSFVNGIATIKGG 315
             KSF +Y  +Y  P S  +       H   N        L+ G  +    VNG+ T  GG
Sbjct: 242  FKSFDDYAGLYSIPSSDGQLPPKPFVHNSRNGSIAFVPQLNAGAKRIFGVVNGVVTHNGG 301

Query: 316  THVDYVANQVANHVMAVVNKKNKNANV-KAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
            TH +  ++ +   + A+     K+  V  A+ V  H  + V  +   P FDSQ+K  L  
Sbjct: 302  THCNAASDILTGTLDALSRTLKKDGKVVDANRVMRHFTILVFLIQSQPKFDSQSKARLV- 360

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT-----KTEDVRGI 429
               S  +   + +  L++  +    +E  ++  + + + +L K  G          +  I
Sbjct: 361  ---STVTMPRVPKGELEQYLSSMPFLEAHVNSMSDQIAAELNKEMGAGKLLSSKSLISSI 417

Query: 430  SKLEDA--NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
            +KL DA  N + G+N    TLI+TEGDSAKALA+  LS   +   GVFPLRGKLLNVR  
Sbjct: 418  TKLVDATSNKSDGKNIR--TLIVTEGDSAKALALNSLSSDQKRFCGVFPLRGKLLNVRNN 475

Query: 488  SSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            +  ++ N  E+ ++   LGL+ G  Y ++  LRY  L+ MTDQ                 
Sbjct: 476  NLKRLKNCKELQDLFLALGLELGKTYRSLNELRYQRLLTMTDQ----------------- 518

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLL-KIPSFLVEFITPIVK--ATNKNGKV 604
                       D DGSHIKGL+IN   S WP LL +   ++  F TPIVK     KN  V
Sbjct: 519  -----------DADGSHIKGLVINAFESLWPELLQRHQGYISLFSTPIVKIRPRGKNQDV 567

Query: 605  LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD 664
            LSFYS  D+  W+ +      +++ KYYKGLGTST+ EGKEYF N+  +    +  D +D
Sbjct: 568  LSFYSFKDFHKWQRAHPN--VNYTAKYYKGLGTSTTAEGKEYFSNMEQNIMK-LQVDPKD 624

Query: 665  GEAIELAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
             + ++  F  +++E RK W+ +   F     +D+ +K +   DFV+KE++ F++A   R+
Sbjct: 625  HKLLDSVFDSQEVEWRKDWMTKANAFNGDVDIDRSKKVLSIPDFVHKEMVHFALAGNARA 684

Query: 722  IPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQD 781
            I   VDGLKP QRKIL+  FKR   + AKVAQ SGY+SE S++HHGE SL  TI+ MAQ+
Sbjct: 685  IAHSVDGLKPSQRKILWALFKRGKAESAKVAQLSGYISEVSSFHHGEMSLQETIVKMAQN 744

Query: 782  FVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQ 841
            F G NNINLL P GQFG+R Q G D A+ RYIFT+LS   R LFP+DD+ LLDY  E+G 
Sbjct: 745  FTGGNNINLLVPEGQFGSRQQLGNDHAAPRYIFTKLSRFARVLFPEDDEPLLDYTEEEGT 804

Query: 842  QIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHP 897
              EP  Y+PIIP +L NGS GIG G++S IP+Y+P D+ A VR ++NGE    +++ + P
Sbjct: 805  TTEPNHYVPIIPMLLCNGSVGIGFGFASNIPSYHPLDVSAVVRSMINGETAKQVVKRLVP 864

Query: 898  WYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID-Q 956
            W  GF GT+ +    E    +   G         + + ELP   WT     F   I +  
Sbjct: 865  WAVGFQGTVRRGPEGE----FIAVGKYSAYKNNYIHVSELP---WTTSIEAFRGHISNLA 917

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
            N   ++    YS    +D ++ + E S+  T    +     L+  I   N  +F   G +
Sbjct: 918  NMDVVQRIADYSGANHIDIDLIVREGSV--TTWSEVEADLALSQKIYI-NGTVFSPSGTL 974

Query: 1017 KKYDTP-EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
               +     IL+  +  RL  Y+KR+  QL  LE +L  LE+  +F++    G+I     
Sbjct: 975  APLEGDLSPILQRHYDRRLNLYKKRRARQLGLLEHDLACLESTRKFVMHFRQGKI----- 1029

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMA 1135
               D +                        ATDET +   +   +  V +  YDY+L   
Sbjct: 1030 ---DFMT-----------------------ATDETLQKVCDRLHLQKVDA-KYDYILKKP 1062

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEER 1195
            I   T      L  D  KL + +++++K TP  +W+++LD  D   +E ++    + ++ 
Sbjct: 1063 ITFFTRTNTTKLDDDIKKLQDSIEEMKKTTPTKMWLRELDQFDKLFEEYERVLNNSIQKE 1122

Query: 1196 MKIKGNGNGD 1205
            M+ K  G G+
Sbjct: 1123 MRDKMPGKGE 1132


>gi|71650226|ref|XP_813815.1| mitochondrial DNA topoisomerase II [Trypanosoma cruzi strain CL
            Brener]
 gi|70878735|gb|EAN91964.1| mitochondrial DNA topoisomerase II, putative [Trypanosoma cruzi]
          Length = 1230

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 399/1192 (33%), Positives = 626/1192 (52%), Gaps = 123/1192 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + ++H+L+RP+ Y+GS++  + ++++++ E   M+  ++    GL KI DEIL+NA
Sbjct: 7    YKKLTPIDHVLIRPEMYVGSVDTSSSSMFVFDHEKGRMVWESLKVNHGLLKIVDEILLNA 66

Query: 91   ADN-KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            +DN   +  +M  ++V I +  + I++ N G G+P+   +E  +Y+PE++FGHLLTSSNY
Sbjct: 67   SDNIANKGGRMTYIRVHITEAGE-ITIENDGAGIPIVRSKEHKLYIPEMVFGHLLTSSNY 125

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DD  +    GR+GYGAKLTNI S  F +      + K++   + ++M + + P +S    
Sbjct: 126  DDTSQNAVAGRHGYGAKLTNILSHRFSV--CCRTKGKEFHMSWHDHMRRATAPRVSNVDP 183

Query: 210  GD-NWTKVSFKPDLAKFNM--THLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
             + N T+V F PD  +F +    +  D+  ++ KR++DLA     S+++ LNG     KS
Sbjct: 184  REKNLTRVKFLPDYERFGLDANKISHDMKRVLHKRIMDLAAMF-PSIEISLNGVPFAFKS 242

Query: 267  FAEYVDMYPKSVTR--------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
            FA+Y  +Y    +          +E  N       +L+ G  +    VNG+ T  GGTH 
Sbjct: 243  FADYAMLYSSPTSSGEMPPAPFVYESRNGAIAFIPSLTAGTRRIFGVVNGVVTHNGGTHC 302

Query: 319  DYVANQVANHVMAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            +  A +V    +  V K  K  N  +  + V  H  + V  +   P FDSQ K  L    
Sbjct: 303  N-AAQEVLQSSLENVEKALKKDNKVIDTNRVLRHFTILVFLVQVQPKFDSQNKARLV--- 358

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TKTEDVRGISK 431
             S  +   +  + L     +   +E  ++    + + +L K  G     +    +  I+K
Sbjct: 359  -SVPTMPRVPRQELMDFLLRMPFLEAHVNTVTGQLADELNKEMGAGRRMSSKSLISSITK 417

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            L DA           TLI+TEGDSAKALA   LS   +   GVFPLRGKLLNVR  +  +
Sbjct: 418  LVDATTTRRDPRFVRTLIVTEGDSAKALAQNSLSSDQKRYTGVFPLRGKLLNVRNKNLKR 477

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            + N  E+  +   LGL+ G  Y + + LRY  L++MTDQ                     
Sbjct: 478  LKNCKELQELFCALGLELGKIYKDAEELRYQRLLVMTDQ--------------------- 516

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLL-KIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                   D DGSHIKGL+IN   + WPSLL + P F+  F TPIVK   ++    SF+S+
Sbjct: 517  -------DADGSHIKGLVINAFEALWPSLLNRNPGFISIFSTPIVKVRLRDKSTHSFFSL 569

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
             ++  W+++ G    S++ KYYKGLGTST+ EGKEYF+++  H    V E + D + ++ 
Sbjct: 570  KEFHKWQKTHGN--VSYTAKYYKGLGTSTTAEGKEYFKDMDKHTMRLVVERN-DHKLLDS 626

Query: 671  AFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVD 727
             F  +++E RK W+ +   +     +D+ +K +   DFV+KE++ F++A   R++   VD
Sbjct: 627  VFDSQEVEWRKDWMTKANAYTGEVDIDRSKKTLTVPDFVHKEMVHFALAGNARALAHAVD 686

Query: 728  GLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNN 787
            GLKP QRKIL+   +R+  + AKVAQ SGY+SE SA+HHGE SL  TI+ MAQ+F G NN
Sbjct: 687  GLKPSQRKILWAIMRRSGNESAKVAQLSGYISEVSAFHHGEMSLQETIIKMAQNFTGGNN 746

Query: 788  INLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
            INLL P GQFG+R Q G D A+ARYIFT+LS + R LFP +D+ LLDY+ E+GQQ+EP  
Sbjct: 747  INLLIPEGQFGSRQQLGNDHAAARYIFTKLSSLARILFPSEDEPLLDYVTEEGQQVEPNH 806

Query: 848  YMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHPWYRGFG 903
            Y+PI+P +L NGS GIG G++S IP ++P D+ A VR ++NGE    ++  + PW  G+ 
Sbjct: 807  YVPILPLLLCNGSVGIGFGFASNIPPFHPLDVSAAVRSMINGEAAKVVVRRLVPWAVGYQ 866

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI-IDQNDSFIR 962
            G + +    E    +   G  +   +  + + E+P   WT     F + I +  +   ++
Sbjct: 867  GEVRRGPEGE----FIAAGSYQYYVDGRVHVTEIP---WTLSIEAFRDHISVLASKDVVQ 919

Query: 963  GFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTP 1022
                YS    VD ++ L+  +M  T       +  LT  I   N  +F   GV+    TP
Sbjct: 920  RIADYSGANHVDIDLELTNGAM--TTYAECESELSLTQRIYI-NGTVFSPTGVL----TP 972

Query: 1023 EQ-----ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
             +     +L+  +  RL+ Y+KR++  L  LE EL + ++ ++F+     G+I + N   
Sbjct: 973  LEGDLAPVLQWHYDRRLDLYKKRRQRNLGLLEAELAREKSTLKFVTHFREGKIDIVN--- 1029

Query: 1078 TDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLLSMA 1135
                                        ATD++     +     G+  +D  YDY+L   
Sbjct: 1030 ----------------------------ATDDSLAKTCSKL---GMVRVDDSYDYVLRKP 1058

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKS 1187
            I   T   ++ L     +  + +D L+K TP  +W+ +LD  D   +E +K+
Sbjct: 1059 ITFYTKTSLENLNRKISETEKRIDKLKKTTPVQMWLDELDRFDRAFEEHEKT 1110


>gi|212645657|ref|NP_495440.4| Protein CIN-4 [Caenorhabditis elegans]
 gi|158514533|gb|ABW69249.1| chromosome instability 4 [Caenorhabditis elegans]
 gi|373220462|emb|CCD73727.1| Protein CIN-4 [Caenorhabditis elegans]
          Length = 842

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 353/804 (43%), Positives = 493/804 (61%), Gaps = 77/804 (9%)

Query: 410  KQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVG 468
            KQ  DL +K    KT  ++GI KLEDAN AG +NS+QCTLILTEGDSAK LA++GLSVVG
Sbjct: 20   KQMDDLNQKCPKRKTSKLKGIPKLEDANDAGTKNSQQCTLILTEGDSAKTLAVSGLSVVG 79

Query: 469  RDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLM 525
            RD++GVFP R KLLNV + + NQ+ +++E+  I KILGL+   +Y   ++ K+LRYG L+
Sbjct: 80   RDKYGVFPFRRKLLNVCDLNVNQIADSAEVNAIIKILGLQYTKKYETEDDFKTLRYGKLL 139

Query: 526  IMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPS 585
            IM +                             D DGS  KGLL+NF H FWP+L K   
Sbjct: 140  IMANH----------------------------DSDGSQFKGLLLNFFHRFWPALFK-RD 170

Query: 586  FLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKE 645
            F+ +FITPI KAT    +V SFYS+P+Y  W+ +   N  S++IKYY GLGT TSKE K+
Sbjct: 171  FVEDFITPIAKATEGKEEV-SFYSLPEYSEWRMN-TDNWKSYTIKYYNGLGTLTSKEAKK 228

Query: 646  YFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQF-EPGNHLDQK-------- 696
             F ++  H+  F +    D +A+ +AFSKKKIEAR  +L++  +  N   Q+        
Sbjct: 229  CFSDMVRHRIRFKYNGADDDKAVNMAFSKKKIEARTDYLMKLMQDKNQRKQQGLAEECLY 288

Query: 697  ---EKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQ 753
                +++   DF N E++     +L  SIP +VDGLKPGQRK+LF  FKR   +E KVAQ
Sbjct: 289  NKETRFVTLKDFFNYEIV--CSWNLH-SIPCLVDGLKPGQRKVLFACFKRANKREVKVAQ 345

Query: 754  FSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYI 813
             +G V+E SAYHHGEQSL  TI+ +AQD+VGS+NINLL P GQFGTR QGGKD+ASAR I
Sbjct: 346  LAGAVAEISAYHHGEQSLMGTIVNLAQDYVGSHNINLLLPIGQFGTRLQGGKDSASARSI 405

Query: 814  FTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPN 873
            F +LS +TR LFP  DD +L +L E+ Q+IEP WY PIIP VLVNG++G GTGWS+ IPN
Sbjct: 406  FAQLSQVTRTLFPAHDDNVLRFLYEENQRIEPEWYCPIIPMVLVNGAQGTGTGWSTNIPN 465

Query: 874  YNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLR 933
            YNPR++V N++RL+ GE  + + PWY+ F G I +         +   G +  +++ T+ 
Sbjct: 466  YNPRELVKNIKRLIAGEPQKALAPWYKNFRGKIIQIDPSR----FACYGEVSVLDDNTIE 521

Query: 934  IKELPIRRWTQDYRE-FLESIIDQNDS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQ 989
            I ELPI++WTQDY+E  LE +++ +D     I  +++Y  DTTV F V LS   +   ++
Sbjct: 522  ITELPIKQWTQDYKEKVLEGLMESSDKKSPVIVDYKEYHTDTTVKFVVKLSPGKLRELER 581

Query: 990  -EGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENL 1048
             + L + FKL   I+T+ M LFD+ G ++ Y +PE I +EF+  R E Y +RK+  L  L
Sbjct: 582  GQDLHQVFKLQAVINTTCMVLFDAAGWLRTYTSPEAITQEFYDSRQEKYVQRKEYLLGVL 641

Query: 1049 ELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-------------KN 1095
            + +  +L N+ RFIL  +N +IV+ N+K+T ++  L +  F   P             + 
Sbjct: 642  QAQSKRLTNQARFILATINNKIVLENKKKTAIVDVLIKMKFDADPVKKWKEDQKLKELRE 701

Query: 1096 SKSIEA----VVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADR 1151
            S  IE     + A A +E E+     + V    S DYDYL+ +A+  L+ E+   L+ + 
Sbjct: 702  SGEIELDEDDLAAVAVEEGEDISSAAKAVETKLS-DYDYLVGLALIKLSEEEKNKLIKES 760

Query: 1152 DKLNEEVDDLRKATPESLWVKDLD 1175
            ++   EV  L K T + LW+ DLD
Sbjct: 761  EEKMAEVRVLEKKTWQDLWITDLD 784


>gi|407844394|gb|EKG01941.1| mitochondrial DNA topoisomerase II, putative [Trypanosoma cruzi]
          Length = 1231

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 400/1192 (33%), Positives = 626/1192 (52%), Gaps = 123/1192 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + ++H+L+RP+ Y+GS++  + ++++++ E   M+  ++    GL KI DEIL+NA
Sbjct: 7    YKKLTPIDHVLIRPEMYVGSVDTSSSSMFVFDHEKGRMVWESLKVNHGLLKIVDEILLNA 66

Query: 91   ADN-KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            +DN   +  +M  ++V I +  + I++ N G G+P+   +E  +Y+PE++FGHLLTSSNY
Sbjct: 67   SDNIANKGGRMTYIRVHITEAGE-ITIENDGAGIPIVRSKEHKLYIPEMVFGHLLTSSNY 125

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DD  +    GR+GYGAKLTNI S  F +      + K++   + ++M + + P +S    
Sbjct: 126  DDTSQNAVAGRHGYGAKLTNILSHRFSV--CCRTKGKEFHMSWHDHMRRATAPRVSNVDP 183

Query: 210  GD-NWTKVSFKPDLAKFNM--THLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
             + N T+V F PD  +F +    +  D+  ++ KR++DLA     S+++ LNG     KS
Sbjct: 184  KEKNLTRVKFLPDYERFGLDANKISHDMKRVLHKRIMDLAAMF-PSIEISLNGVPFAFKS 242

Query: 267  FAEYVDMY--PKSVTRF------HERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
            FA+Y  +Y  P S          +E  N       +L+ G  +    VNG+ T  GGTH 
Sbjct: 243  FADYAMLYSSPSSSGEMPPAPFVYESRNGAIAFIPSLTAGTRRIFGVVNGVVTHNGGTHC 302

Query: 319  DYVANQVANHVMAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            +  A +V    +  V K  K  N  +  + V  H  + V  +   P FDSQ K  L    
Sbjct: 303  N-AAQEVLQSSLESVEKALKKDNKVIDTNRVLRHFMILVFLVQVQPKFDSQNKARLV--- 358

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TKTEDVRGISK 431
             S  +   +  + L     +   +E  ++    + + +L K  G     +    +  I+K
Sbjct: 359  -SVPTMPRVPRQELMDFLLRMPFLEAHVNTVTGQLADELNKEMGAGRRMSSKSLISSITK 417

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            L DA           TLI+TEGDSAKALA   LS   +   GVFPLRGKLLNVR  +  +
Sbjct: 418  LVDATTTRRDPRFVRTLIVTEGDSAKALAQNSLSSDQKRYTGVFPLRGKLLNVRNKNLKR 477

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            + N  E+  +   LGL+ G  Y + + LRY  L++MTDQ                     
Sbjct: 478  LKNCKELQELFCALGLELGKIYKDAEELRYQRLLVMTDQ--------------------- 516

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLL-KIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                   D DGSHIKGL+IN   + WPSLL + P F+  F TPIVK   ++    SF+S+
Sbjct: 517  -------DADGSHIKGLVINAFEALWPSLLNRNPGFISIFSTPIVKVRLRDKSTHSFFSL 569

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
             ++  W+++ G    S++ KYYKGLGTST+ EGKEYF+++  H    V E + D + ++ 
Sbjct: 570  KEFHKWQKTHGN--VSYTAKYYKGLGTSTTAEGKEYFKDMDKHTMRLVVERN-DHKLLDS 626

Query: 671  AFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVD 727
             F  +++E RK W+ +   +     +D+ +K +   DFV+KE++ F++A   R++   VD
Sbjct: 627  VFDSQEVEWRKDWMTKANAYTGEVDIDRSKKTLTVPDFVHKEMVHFALAGNARALAHAVD 686

Query: 728  GLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNN 787
            GLKP QRKIL+   +R+  + AKVAQ SGY+SE SA+HHGE SL  TI+ MAQ+F G NN
Sbjct: 687  GLKPSQRKILWAIMRRSGNESAKVAQLSGYISEVSAFHHGEMSLQETIIKMAQNFTGGNN 746

Query: 788  INLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
            INLL P GQFG+R Q G D A+ARYIFT+LS + R LFP +D+ LLDY+ E+GQQ+EP  
Sbjct: 747  INLLIPEGQFGSRQQLGNDHAAARYIFTKLSSLARILFPSEDEPLLDYVTEEGQQVEPNH 806

Query: 848  YMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHPWYRGFG 903
            Y+PI+P +L NGS GIG G++S IP ++P D+ A VR ++NGE    ++  + PW  G+ 
Sbjct: 807  YVPILPLLLCNGSVGIGFGFASNIPPFHPLDVSAAVRSMINGEAAKVVVRRLVPWAVGYQ 866

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI-IDQNDSFIR 962
            G + +    E    +   G  +   +  + + E+P   WT     F + I +  +   ++
Sbjct: 867  GEVRRGPEGE----FIAAGSYQYYVDGRVHVTEIP---WTLSIEAFRDHISVLASKDVVQ 919

Query: 963  GFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTP 1022
                YS    VD ++ L+  +M  T       +  LT  I   N  +F   GV+    TP
Sbjct: 920  RIADYSGANHVDIDLELTNGAM--TTYAECESELSLTQRIYI-NGTVFSPTGVL----TP 972

Query: 1023 EQ-----ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
             +     +L+  +  RL+ Y+KR++  L  LE EL + ++ ++F+     G+I + N   
Sbjct: 973  LEGDLAPVLQWHYDRRLDLYKKRRQRNLGLLEAELAREKSTLKFVTHFREGKIDIVN--- 1029

Query: 1078 TDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLLSMA 1135
                                        ATD++     +     G+  +D  YDY+L   
Sbjct: 1030 ----------------------------ATDDSLAKTCSKL---GMVRVDDSYDYVLRKP 1058

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKS 1187
            I   T   ++ L     +  + +D L+K  P  +W+ +LD  D   +E +K+
Sbjct: 1059 ITFYTKTSLENLNRKISETEKRIDKLKKTAPVQMWLDELDRFDRAFEEHEKT 1110


>gi|261331231|emb|CBH14221.1| DNA topoisomerase II, putative [Trypanosoma brucei gambiense DAL972]
          Length = 1221

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 406/1184 (34%), Positives = 614/1184 (51%), Gaps = 125/1184 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + +EH+L RP+ YIGS++     ++IY+E+   M+  T+    GL KI DEIL+NA
Sbjct: 7    YKKLTPIEHVLTRPEMYIGSLDTTATPMFIYDEQKGHMVWETVKLNHGLLKIVDEILLNA 66

Query: 91   ADN-KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            +DN   R  +M  ++V I    + I++ N G G+P+   +E  +Y+PE++FGHLLTSSNY
Sbjct: 67   SDNISNRSARMTYIRVTITDTGE-ITIENDGAGIPIVRSREHKLYIPEMVFGHLLTSSNY 125

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DD+ +    GR+GYGAKLTNI S  F +      R  ++   + ++M K + P +S    
Sbjct: 126  DDDNQNAVAGRHGYGAKLTNILSLSFSVCCRTNGR--EFHMSWQDHMRKATAPRVSNVGT 183

Query: 210  GD-NWTKVSFKPDLAKFNMTH--LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
             + N T+V F PD  +F M    + +D+  ++ KR++DL+     ++++ LNG     KS
Sbjct: 184  KEKNVTRVKFLPDYERFGMKEKKISNDMKRVLYKRIMDLSAMF-PNIQITLNGSSFGFKS 242

Query: 267  FAEYVDMY----PKSVTRFHERVNERWEICV----TLSEGQFQQVSFVNGIATIKGGTHV 318
            F +Y  +Y    PK        V E    CV    ++  G  +    VNG+ T  GGTH 
Sbjct: 243  FKDYATLYSAMTPKGEKPPPPYVYESKSGCVAFIPSVVPGVRRMFGVVNGVVTYNGGTHC 302

Query: 319  DYVANQVANHVMAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            +  A  +    +  V +  K +N  +  + V  H  + V  +   P FDSQ K  L    
Sbjct: 303  N-AAQDILTGCLDGVERELKKENKVMDTNRVLRHFTILVFLVQVQPKFDSQNKARLV--- 358

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED-----VRGISK 431
             S  +   +  + + K   +   +E  +S    + +++L K  GT         +  I+K
Sbjct: 359  -STPTMPRVPRQDVMKYLLRMPFLEAHVSTITGQLAQELNKEIGTGRRMSSKTLLTSITK 417

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            L DA           TLI+TEGDSAKALA   LS   +   GVFPLRGKLLNVR  +  +
Sbjct: 418  LVDATSTRRDPKHTRTLIVTEGDSAKALAQNSLSSDQKRYTGVFPLRGKLLNVRNKNLKR 477

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            + N  E+  +   LGL+   +Y +   LRY  ++IMTDQ                     
Sbjct: 478  LRNCKELQELFCALGLELDKDYTDADELRYQRILIMTDQ--------------------- 516

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLL-KIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                   D DGSHIKGL+IN   S WPSLL + P F+  F TPIVKA  ++  V+SF+SM
Sbjct: 517  -------DADGSHIKGLVINAFESLWPSLLVRNPGFISIFSTPIVKARLRDKSVVSFFSM 569

Query: 611  PDYEAWKESLGGNASS-WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
             ++  W+ S   NA++ ++ KYYKGLGTST+ EGKEYF+++  H    +  D  D + ++
Sbjct: 570  KEFHKWQRS---NANTPYTCKYYKGLGTSTTAEGKEYFKDMEKHTMRLLV-DRSDHKLLD 625

Query: 670  LAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
              F  +++E RK W+ +   F     +D+ +K +  +DFV+KE++ F++    R++   V
Sbjct: 626  NVFDSQEVEWRKDWMTKANAFTGEVDIDRSKKMLTVTDFVHKEMVHFALVGNARALAHSV 685

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DGLKP QRKI++   +R+  + AKVAQ SGY+SE SA+HHGE SL  T++ MAQ F G N
Sbjct: 686  DGLKPSQRKIIWALMRRSGNEAAKVAQLSGYISEASAFHHGETSLQETMIKMAQSFTGGN 745

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            N+NLL P GQFG+R Q G D A+ RYIFT+LS + R LFP +DD LLDY+ E+GQQ+EP 
Sbjct: 746  NVNLLVPEGQFGSRQQLGNDHAAPRYIFTKLSKVARLLFPSEDDPLLDYIVEEGQQVEPN 805

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHPWYRGF 902
             Y+PI+P +L NGS GIG G++S IP ++P D+ A VR +++GE    ++  + PW  GF
Sbjct: 806  HYVPILPLLLCNGSVGIGFGFASNIPPFHPLDVSAAVRAMISGEAAKSVVRRLVPWAVGF 865

Query: 903  GGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI-IDQNDSFI 961
             G I +    E    +   G         + + ELP   WT     F E I        +
Sbjct: 866  QGEIRRGPEGE----FIAVGTYTYCKGGRVHVTELP---WTCSVEAFREHISYLATKDIV 918

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQE-----GLLKKFKLTTTISTSNMHLFDSKGVI 1016
                 YS    VD +V +++ + + T  E     GL ++  +  T+ + N  L      +
Sbjct: 919  NRIADYSGANHVDIDVEVAQGA-VNTYAECESELGLTQRIHINGTVFSPNGTL----SPL 973

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            +   TP  +L+  +  RL+ Y+KR++  L  LE EL + ++ ++F+     G I   N  
Sbjct: 974  ESDLTP--VLQWHYDRRLDLYKKRRQRNLTLLEQELAREKSTLKFVQHFRAGHIDFAN-- 1029

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLLSM 1134
                                             TE + E      G+  +D  +DY+L  
Sbjct: 1030 --------------------------------ATEATLEKVCSKLGLVRVDDSFDYILRK 1057

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
             I   T    + LL    +    ++ L+K TP  LW+ +LD  D
Sbjct: 1058 PITFYTKTSFENLLKKIAETERRIEALKKTTPVQLWLGELDQFD 1101


>gi|401418313|ref|XP_003873648.1| mitochondrial DNA topoisomerase II [Leishmania mexicana
            MHOM/GT/2001/U1103]
 gi|322489879|emb|CBZ25140.1| mitochondrial DNA topoisomerase II [Leishmania mexicana
            MHOM/GT/2001/U1103]
          Length = 1236

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 399/1192 (33%), Positives = 629/1192 (52%), Gaps = 121/1192 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + ++H+LLRP+ Y+GSIE    +++I++ E   M+  T+    GL KI DEIL+NA
Sbjct: 7    YKKLTPIDHVLLRPEMYVGSIETQPTSMYIFDPEKGKMVWETMRVNQGLLKIVDEILLNA 66

Query: 91   ADN---KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
            ADN    +   +   + + I    + I+V N G G+P+   +E  +Y+PE++FGHLLTSS
Sbjct: 67   ADNITNSKGSVRQTYISINISDTGE-ITVENDGAGLPIVRSREHKMYIPEMVFGHLLTSS 125

Query: 148  NYDDNVKKTTGGRNGYGAKLTNIFSTEF-IIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            NY+++   TT GR+GYGAKLTNI ST+F ++   DG+   ++   +T++M   + P +++
Sbjct: 126  NYNNDSTSTTAGRHGYGAKLTNILSTKFSVVCRTDGR---EFHMSWTDHMRMATAPRVNR 182

Query: 207  CKEGD-NWTKVSFKPDLAKFNM--THLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
                + N T+V F PD A F      +  D+  ++ KR++DLA    K ++V LN     
Sbjct: 183  VDPKEKNVTRVKFMPDYAHFGFPSASISLDMKRVLHKRIMDLAAMFSK-IEVRLNNVPFG 241

Query: 264  VKSFAEYVDMYPKSVTR--------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGG 315
             +SF +Y  +Y  S            +   N        L++   + VS VNG+ T  GG
Sbjct: 242  FRSFTDYARLYSLSGLDGSMPPEPFVYTSSNGSVAYVPQLTQSPKRIVSVVNGVVTYNGG 301

Query: 316  THVDYVANQVANHVMAVVNKKNKNANVKAHN-VKNHLWVFVNALIDNPAFDSQTKETLTL 374
            TH +   + + + + ++     KN  V   N V+ H  V V  +   P FDSQ+K  L  
Sbjct: 302  THCNAAMDILDSCLDSLSKNFKKNGKVVDTNRVQRHFTVLVFLVQAQPKFDSQSKARLV- 360

Query: 375  RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TKTEDVRGI 429
               S  +   + +  L+K   +   +E  ++  + + + +L K  G     +    +  I
Sbjct: 361  ---STVTMPRVPKNTLEKYLERMPFLEAHVNSMDDQLTNELNKEIGAGRRLSSKTLISSI 417

Query: 430  SKLEDA--NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
            +KL DA  + + GRN    TLI+TEGDSAKALA+  LS   +   GVFPLRGKLLNVR  
Sbjct: 418  TKLVDATSSRSDGRNIR--TLIITEGDSAKALALNSLSSEQKKYCGVFPLRGKLLNVRNK 475

Query: 488  SSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
            +  ++    E+ ++   LGL+ G EY  +  LRY  L++MTDQ                 
Sbjct: 476  NLKRLKTCKELQDLFLSLGLELGKEYRTLAELRYQRLLVMTDQ----------------- 518

Query: 548  WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVK--ATNKNGKV 604
                       D DGSHIKGL+IN   S WP LL+  P ++  F TPIVK     K+ +V
Sbjct: 519  -----------DADGSHIKGLVINAFESLWPKLLQNNPGYISLFSTPIVKIKVNGKSKEV 567

Query: 605  LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQD 664
            ++F+S  D+  W+ +    ++ ++ KYYKGLGTST+ EGKEYF ++  +       D +D
Sbjct: 568  IAFHSFRDFHRWQRA--HPSARYTAKYYKGLGTSTTAEGKEYFADMEKNIMQLT-VDARD 624

Query: 665  GEAIELAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
             + ++  F   ++E RK+W+ +   F+    +D+ +K +   +FV+KE++ F++    R+
Sbjct: 625  HQLLDSVFDAAEVEWRKEWMTKANAFQGEIDIDRSKKMLTIPEFVHKEMVHFALVGNARA 684

Query: 722  IPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQD 781
            IP  VDGLKP QRKIL+   +R+  + +KVAQ SGY+SE SA+HHGE SL  TI+ MAQ+
Sbjct: 685  IPHCVDGLKPSQRKILWAMLRRHSSEASKVAQLSGYISEASAFHHGEASLQETIVKMAQN 744

Query: 782  FVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQ 841
            F G NNINLL P GQFG+R Q G D A+ RYIFT+LS   R LFP++DD LLDY++E+G 
Sbjct: 745  FTGGNNINLLVPEGQFGSRQQLGSDHAAPRYIFTKLSRFARLLFPEEDDPLLDYMDEEGT 804

Query: 842  QIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHP 897
             +EP  Y+PI+P +L NG+ GIG G+++ IP ++P D+ A VR ++NGE    +M  + P
Sbjct: 805  FVEPHHYVPILPMLLCNGAVGIGFGFATTIPAFHPLDVSAAVRAMINGESAKQVMRNLVP 864

Query: 898  WYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN 957
            W  GF GT+ +    E    +   G           I E+P     + +R  + S+   +
Sbjct: 865  WAVGFQGTVRRGPDNE----FIAVGKYTAHPNGRFHISEIPWMTSIEAFRLHISSLASAD 920

Query: 958  DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIK 1017
               ++    YS    +D ++ + E S+  T          L   I   N  +F   G + 
Sbjct: 921  --VVQRIADYSGANHIDIDLIVREGSL--TTWAECETDLALAQRIYI-NGTVFSPTGTLS 975

Query: 1018 KYDTP-EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
              D+    +L+  +  RL+ Y++R+  ++  +E++L +L++  +F+     G+I      
Sbjct: 976  PIDSDLSPVLQWHYDRRLDLYKRRRTRKIGLMEMDLARLQSTRKFVEHFRQGQI------ 1029

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLLSM 1134
              D L                        ATD+T        V  G+  +D  +DY+L  
Sbjct: 1030 --DFL-----------------------NATDDTLHKT---CVKLGLVRVDESFDYILKK 1061

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
             I   T    + L AD  K   ++++L++ TP  +W+ +LD  D    E ++
Sbjct: 1062 PITFFTRTSTEKLQADIAKTQAQIEELKRTTPVKMWLTELDKFDKTFQEYER 1113


>gi|71744648|ref|XP_803868.1| DNA topoisomerase II [Trypanosoma brucei brucei strain 927/4
            GUTat10.1]
 gi|70831119|gb|EAN76624.1| DNA topoisomerase II [Trypanosoma brucei brucei strain 927/4
            GUTat10.1]
          Length = 1221

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 406/1184 (34%), Positives = 614/1184 (51%), Gaps = 125/1184 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + +EH+L RP+ YIGS++     ++IY+E+   M+  T+    GL KI DEIL+NA
Sbjct: 7    YKKLTPIEHVLTRPEMYIGSLDTTATPMFIYDEQKGHMVWETVKLNHGLLKIVDEILLNA 66

Query: 91   ADN-KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            +DN   R  +M  ++V I    + I++ N G G+P+   +E  +Y+PE++FGHLLTSSNY
Sbjct: 67   SDNISNRSARMTYIRVTITDTGE-ITIENDGAGIPIVRSREHKLYIPEMVFGHLLTSSNY 125

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DD+ +    GR+GYGAKLTNI S  F +      R  ++   + ++M K + P +S    
Sbjct: 126  DDDNQNAVAGRHGYGAKLTNILSLSFSVCCRTNGR--EFHMSWQDHMRKATAPRVSNVGT 183

Query: 210  GD-NWTKVSFKPDLAKFNMTH--LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
             + N T+V F PD  +F M    + +D+  ++ KR++DL+     ++++ LNG     KS
Sbjct: 184  KEKNVTRVKFLPDYERFGMKEKKISNDMKRVLYKRIMDLSAMF-PNIQITLNGSSFGFKS 242

Query: 267  FAEYVDMY----PKSVTRFHERVNERWEICV----TLSEGQFQQVSFVNGIATIKGGTHV 318
            F +Y  +Y    PK        V E    CV    ++  G  +    VNG+ T  GGTH 
Sbjct: 243  FKDYATLYSAMTPKGEKPPPPYVYESKSGCVAFIPSVVPGVRRMFGVVNGVVTYNGGTHC 302

Query: 319  DYVANQVANHVMAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            +  A  +    +  V +  K +N  +  + V  H  + V  +   P FDSQ K  L    
Sbjct: 303  N-AAQDILTGCLDGVERELKKENKVMDTNRVLRHFTILVFLVQVQPKFDSQNKARLV--- 358

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED-----VRGISK 431
             S  +   +  + + K   +   +E  +S    + +++L K  GT         +  I+K
Sbjct: 359  -STPTMPRVPRQDVMKYLLRMPFLEAHVSTITGQLAQELNKEIGTGRRMSSKTLLTSITK 417

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            L DA           TLI+TEGDSAKALA   LS   +   GVFPLRGKLLNVR  +  +
Sbjct: 418  LVDATSTRRDPKHTRTLIVTEGDSAKALAQNSLSSDQKRYTGVFPLRGKLLNVRNKNLKR 477

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            + N  E+  +   LGL+   +Y +   LRY  ++IMTDQ                     
Sbjct: 478  LRNCKELQELFCALGLELDKDYTDADELRYQRILIMTDQ--------------------- 516

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLL-KIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                   D DGSHIKGL+IN   S WPSLL + P F+  F TPIVKA  ++  V+SF+SM
Sbjct: 517  -------DADGSHIKGLVINAFESLWPSLLVRNPGFISIFSTPIVKARLRDKSVVSFFSM 569

Query: 611  PDYEAWKESLGGNASS-WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
             ++  W+ S   NA++ ++ KYYKGLGTST+ EGKEYF+++  H    +  D  D + ++
Sbjct: 570  KEFHKWQRS---NANTPYTCKYYKGLGTSTTAEGKEYFKDMEKHTMRLLV-DRSDHKLLD 625

Query: 670  LAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
              F  +++E RK W+ +   F     +D+ +K +  +DFV+KE++ F++    R++   V
Sbjct: 626  NVFDSQEVEWRKDWMTKANAFTGEVDIDRSKKMLTVTDFVHKEMVHFALVGNARALAHSV 685

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DGLKP QRKI++   +R+  + AKVAQ SGY+SE SA+HHGE SL  T++ MAQ F G N
Sbjct: 686  DGLKPSQRKIIWALMRRSGNEAAKVAQLSGYISEASAFHHGETSLQETMIKMAQSFTGGN 745

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            N+NLL P GQFG+R Q G D A+ RYIFT+LS + R LFP +DD LLDY+ E+GQQ+EP 
Sbjct: 746  NVNLLVPEGQFGSRQQLGNDHAAPRYIFTKLSKVARLLFPSEDDPLLDYIVEEGQQVEPN 805

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHPWYRGF 902
             Y+PI+P +L NGS GIG G++S IP ++P D+ A VR +++GE    ++  + PW  GF
Sbjct: 806  HYVPILPLLLCNGSVGIGFGFASNIPPFHPLDVSAAVRAMISGEAAKSVVRRLVPWAVGF 865

Query: 903  GGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI-IDQNDSFI 961
             G I +    E    +   G         + + ELP   WT     F E I        +
Sbjct: 866  QGEIRRGPEGE----FIAVGTYTYCKGGRVHVTELP---WTCSVEAFREHISYLATKDIV 918

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQE-----GLLKKFKLTTTISTSNMHLFDSKGVI 1016
                 YS    VD +V +++ + + T  E     GL ++  +  T+ + N  L      +
Sbjct: 919  NRIADYSGANHVDIDVEVAQGA-VNTYAECESELGLTQRIHINGTVFSPNGTL----SPL 973

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            +   TP  +L+  +  RL+ Y+KR++  L  LE EL + ++ ++F+     G I   N  
Sbjct: 974  ESDLTP--VLQWHYDRRLDLYKKRRQRNLMLLEQELAREKSTLKFVQHFRAGHIDFAN-- 1029

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLLSM 1134
                                             TE + E      G+  +D  +DY+L  
Sbjct: 1030 --------------------------------ATEATLEKVCSKLGLVRVDDSFDYILRK 1057

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
             I   T    + LL    +    ++ L+K TP  LW+ +LD  D
Sbjct: 1058 PITFYTKTSFENLLKKIAETERRIEALKKTTPVQLWLGELDQFD 1101


>gi|267151|sp|P30190.1|TOP2_TRYCR RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|162307|gb|AAA85575.1| DNA topoisomerase II [Trypanosoma cruzi]
 gi|737876|prf||1923363A DNA topoisomerase II
          Length = 1232

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 398/1188 (33%), Positives = 622/1188 (52%), Gaps = 123/1188 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + ++H+L+RP+ Y+GS++  + ++++++ E   M+  ++    GL KI DEIL+NA
Sbjct: 7    YKKLTPIDHVLIRPEMYVGSVDTSSSSMFVFDHEKGRMVWESLKVNHGLLKIVDEILLNA 66

Query: 91   ADN-KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            +DN   +  +M  ++V I +  + I++ N G G+P+   +E  +Y+PE++FGHLLTSSNY
Sbjct: 67   SDNIANKGGRMTYIRVHITEAGE-ITIENDGAGIPIVRSKEHKLYIPEMVFGHLLTSSNY 125

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DD  +    GR+GYGAKLTNI S  F +      + K++   + ++M + + P +S    
Sbjct: 126  DDTSQNAVAGRHGYGAKLTNILSHRFSV--CCRTKGKEFHMSWHDHMRRATAPRVSNVDP 183

Query: 210  GD-NWTKVSFKPDLAKFNM--THLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
             + N T+V F PD  +F +    +  D+  ++ KR++DLA     S+++ LNG     KS
Sbjct: 184  KEKNLTRVKFLPDYERFGLDANKISHDMKRVLHKRIMDLAAMF-PSIEISLNGVPFAFKS 242

Query: 267  FAEYVDMY--PKSVTRF------HERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
            FA+Y  +Y  P S          +E  N       +L+ G  +    VNG+ T  GGTH 
Sbjct: 243  FADYAMLYSSPSSSGEMPPAPFVYESRNGAIAFIPSLTAGTRRIFGVVNGVVTHNGGTHC 302

Query: 319  DYVANQVANHVMAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            +  A +V    +  V K  K  N  +  + V  H  + V  +   P FDSQ K  L    
Sbjct: 303  N-AAQEVLQSSLESVEKALKKDNKVIDTNRVLRHFMILVFLVQVQPKFDSQNKARLV--- 358

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TKTEDVRGISK 431
             S  +   +  + L     +   +E  ++    + + +L K  G     +    +  I+K
Sbjct: 359  -SVPTMPRVPRQELMDFLLRMPFLEAHVNTVTGQLADELNKEMGAGRRMSSKSLISSITK 417

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            L DA           TLI+TEGDSAKALA   LS   +   GVFPLRGKLLNVR  +  +
Sbjct: 418  LVDATTTRRDPRFVRTLIVTEGDSAKALAQNSLSSDQKRYTGVFPLRGKLLNVRNKNLKR 477

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            + N  E+  +   LGL+ G  Y + + LRY  L++MTDQ                     
Sbjct: 478  LKNCKELQELFCALGLELGKIYKDAEELRYQRLLVMTDQ--------------------- 516

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLL-KIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                   D DGSHIKGL+IN   + WPSLL + P F+  F TPIVK   ++    SF+S+
Sbjct: 517  -------DADGSHIKGLVINAFEALWPSLLNRNPGFISIFSTPIVKVRLRDKSTHSFFSL 569

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
             ++  W+++ G    S++ KYYK LGTST+ EGKEYF+++  H    V E + D + ++ 
Sbjct: 570  KEFHKWQKTHGN--VSYTAKYYKALGTSTTAEGKEYFKDMDKHTMRLVVERN-DHKLLDS 626

Query: 671  AFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVD 727
             F  +++E RK W+ +   +     +D+ +K +   DFV+KE++ F++A   R++   VD
Sbjct: 627  VFDSQEVEWRKDWMTKANAYTGEVDIDRSKKTLTVPDFVHKEMVHFALAGNARALAHAVD 686

Query: 728  GLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNN 787
            GLKP QRKIL+   +R+  + AKVAQ SGY+SE SA+HHGE SL  TI+ MAQ+F G NN
Sbjct: 687  GLKPSQRKILWAIMRRSGNESAKVAQLSGYISEVSAFHHGEMSLQETIIKMAQNFTGGNN 746

Query: 788  INLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
            INLL P GQFG+R Q G D A+ARYIFT+LS + R LFP +D+ LLDY+ E+GQQ+EP  
Sbjct: 747  INLLIPEGQFGSRQQLGNDHAAARYIFTKLSSLARILFPSEDEPLLDYVTEEGQQVEPNH 806

Query: 848  YMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHPWYRGFG 903
            Y+PI+P +L NGS GIG G++S IP ++P D+ A VR ++NGE    ++  + PW  G+ 
Sbjct: 807  YVPILPLLLCNGSVGIGFGFASNIPPFHPLDVSAAVRSMINGEAAKVVVRRLVPWAVGYQ 866

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI-IDQNDSFIR 962
            G + +    E    +   G  +   +  + + E+P   WT     F + I +  +   ++
Sbjct: 867  GEVRRGPEGE----FIAAGSYQYYVDGRVHVTEIP---WTLSIEAFRDHISVLASKDVVQ 919

Query: 963  GFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTP 1022
                YS    VD ++ L+  +M  T       +  LT  I   N  +F   GV+    TP
Sbjct: 920  RIADYSGANHVDIDLELTNGAM--TTYAECESELSLTQRIYI-NGTVFSPTGVL----TP 972

Query: 1023 EQ-----ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
             +     +L+  +  RL+ Y+KR++  L  LE EL + ++ ++F+     G+I + N   
Sbjct: 973  LEGDLAPVLQWHYDRRLDLYKKRRQRNLGLLEAELAREKSTLKFVTHFREGKIDIVN--- 1029

Query: 1078 TDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLLSMA 1135
                                        ATD++     +     G+  +D  YDY+L   
Sbjct: 1030 ----------------------------ATDDSLAKTCSKL---GMVRVDDSYDYVLRKP 1058

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
            I   T   ++ L     +  + +D L+K  P  +W+ +LD  D   +E
Sbjct: 1059 ITFYTKTSLENLNRKISETEKRIDKLKKTAPVQMWLDELDRFDRAFEE 1106


>gi|135998|sp|P12531.1|TOP2_TRYBB RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|162305|gb|AAA30256.1| DNA topoisomerase II [Trypanosoma brucei]
          Length = 1221

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 406/1184 (34%), Positives = 613/1184 (51%), Gaps = 125/1184 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + +EH+L RP+ YIGS++     ++IY+E+   M+  T+    GL KI DEIL+NA
Sbjct: 7    YKKLTPIEHVLTRPEMYIGSLDTTATPMFIYDEQKGHMVWETVKLNHGLLKIVDEILLNA 66

Query: 91   ADN-KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            +DN   R  +M  ++V I    + I++ N G G+P+   +E  +Y+PE++FGHLLTSSNY
Sbjct: 67   SDNISNRSARMTYIRVTITDTGE-ITIENDGAGIPIVRSREHKLYIPEMVFGHLLTSSNY 125

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DD+ +    GR+GYGAKLTNI S  F +      R  ++   + ++M K + P +S    
Sbjct: 126  DDDNQNAVAGRHGYGAKLTNILSLSFSVCCRTNGR--EFHMSWQDHMRKATAPRVSNVGT 183

Query: 210  GD-NWTKVSFKPDLAKFNMTH--LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
             + N T+V F PD  +F M    + +D+  ++ KR++DL+     ++++ LNG     KS
Sbjct: 184  KEKNVTRVKFLPDYERFGMKEKKISNDMKRVLYKRIMDLSAMF-PNIQITLNGSSFGFKS 242

Query: 267  FAEYVDMY----PKSVTRFHERVNERWEICV----TLSEGQFQQVSFVNGIATIKGGTHV 318
            F +Y  +Y    PK        V E    CV    ++  G  +    VNG+ T  GGTH 
Sbjct: 243  FKDYATLYSAMTPKGEKPPPPYVYESKSGCVAFIPSVVPGVRRMFGVVNGVVTYNGGTHC 302

Query: 319  DYVANQVANHVMAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
            +  A  +    +  V +  K +N  +  + V  H  + V  +   P FDSQ K  L    
Sbjct: 303  N-AAQDILTGCLDGVERELKKENKVMDTNRVLRHFTILVFLVQVQPKFDSQNKARLV--- 358

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED-----VRGISK 431
             S  +   +  + + K   +   +E  +S    + +++L K  GT         +  I+K
Sbjct: 359  -STPTMPRVPRQDVMKYLLRMPFLEAHVSTITGQLAQELNKEIGTGRRMSSKTLLTSITK 417

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            L DA           TLI+TEGDSAKALA   LS   +   GVFPLRGKLLNVR  +  +
Sbjct: 418  LVDATSTRRDPKHTRTLIVTEGDSAKALAQNSLSSDQKRYTGVFPLRGKLLNVRNKNLKR 477

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            + N  E+  +   LGL+   +Y +   LRY  ++IMTDQ                     
Sbjct: 478  LRNCKELQELFCALGLELDKDYTDADELRYQRILIMTDQ--------------------- 516

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLL-KIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                   D DGSHIKGL+IN   S WPSLL + P F+  F TPIVKA  ++  V+SF+SM
Sbjct: 517  -------DADGSHIKGLVINAFESLWPSLLVRNPGFISIFSTPIVKARLRDKSVVSFFSM 569

Query: 611  PDYEAWKESLGGNASS-WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
             ++  W+ S   NA++ ++ KYYKGLGTST+ EGKEYF+++  H    +  D  D + ++
Sbjct: 570  KEFHKWQRS---NANTPYTCKYYKGLGTSTTAEGKEYFKDMEKHTMRLL-VDRSDHKLLD 625

Query: 670  LAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
              F  +++E RK W+ +   F     +D+ +K +  +DFV+KE++ F++    R++   V
Sbjct: 626  NVFDSQEVEWRKDWMTKANAFTGEVDIDRSKKMLTVTDFVHKEMVHFALVGNARALAHSV 685

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DGLKP QRKI++   +R+  + AKVAQ SGY+SE SA+HHGE SL  T++ MAQ F G N
Sbjct: 686  DGLKPSQRKIIWALMRRSGNEAAKVAQLSGYISEASAFHHGETSLQETMIKMAQSFTGGN 745

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            N+NLL P GQFG+R Q G D A+ RYIFT+LS + R LFP +DD LLDY+ E+GQQ+EP 
Sbjct: 746  NVNLLVPEGQFGSRQQLGNDHAAPRYIFTKLSKVARLLFPSEDDPLLDYIVEEGQQVEPN 805

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHPWYRGF 902
             Y+PI+P +L NGS GIG G+SS IP ++  D+ A VR +++GE    ++  + PW  GF
Sbjct: 806  HYVPILPLLLCNGSVGIGFGFSSNIPPFHRLDVSAAVRAMISGERAKSVVRRLVPWAVGF 865

Query: 903  GGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI-IDQNDSFI 961
             G I +    E    +   G         + + ELP   WT     F E I        +
Sbjct: 866  QGEIRRGPEGE----FIAVGTYTYCKGGRVHVTELP---WTCSVEAFREHISYLATKDIV 918

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQE-----GLLKKFKLTTTISTSNMHLFDSKGVI 1016
                 YS    VD +V +++ + + T  E     GL ++  +  T+ + N  L      +
Sbjct: 919  NRIADYSGANHVDIDVEVAQGA-VNTYAECESELGLTQRIHINGTVFSPNGTL----SPL 973

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            +   TP  +L+  +  RL+ Y+KR++  L  LE EL + ++ ++F+     G I   N  
Sbjct: 974  ESDLTP--VLQWHYDRRLDLYKKRRQRNLTLLEQELAREKSTLKFVQHFGAGHIDFAN-- 1029

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLLSM 1134
                                             TE + E      G+  +D  +DY+L  
Sbjct: 1030 --------------------------------ATEATLEKVCSKLGLVRVDDSFDYILRK 1057

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
             I   T    + LL    +    ++ L+K TP  LW+ +LD  D
Sbjct: 1058 PITFYTKTSFENLLKKIAETERRIEALKKTTPVQLWLGELDQFD 1101


>gi|4929497|gb|AAD34021.1|AF150876_1 DNA topoisomerase II [Leishmania donovani]
          Length = 1236

 Score =  607 bits (1566), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 395/1194 (33%), Positives = 630/1194 (52%), Gaps = 125/1194 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + ++H+LLRP+ Y+GSIE     ++I++ E   M+  T+    GL KI DEIL+NA
Sbjct: 7    YKKLTPIDHVLLRPEMYVGSIETQPTPMYIFDPEKGRMVWETMRVNQGLLKIVDEILLNA 66

Query: 91   ADN---KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
            ADN    +   +   + + I    + I+V N G G+P+   +E  +Y+PE++FGHLLTSS
Sbjct: 67   ADNINNSKGSVRQTYISIHISDTGE-ITVENDGAGLPIVRSREHKMYIPEMVFGHLLTSS 125

Query: 148  NYDDNVKKTTGGRNGYGAKLTNIFSTEF-IIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            NY+++   TT GR+GYGAKLTNI ST+F ++   DG+   ++   +T++M   + P +++
Sbjct: 126  NYNNDSTSTTAGRHGYGAKLTNILSTKFSVVCRTDGR---EFHMSWTDHMRMATAPRVNR 182

Query: 207  CKEGD-NWTKVSFKPDLAKFNMTH--LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
                + N T+V F PD A F   +  +  D+  ++ KR++DLA    K ++V LN     
Sbjct: 183  VDPKEKNVTRVKFMPDYAHFGFPNASISLDMKRVLHKRIMDLAAMFSK-IEVRLNNVPFG 241

Query: 264  VKSFAEYVDMY----------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIK 313
             ++F +Y  +Y          P+     +   N        L++   + V  VNG+ T  
Sbjct: 242  FRTFTDYARLYSLPGLDGSMPPEPFV--YTSPNGSVAYVPQLTQSPKRIVGVVNGVVTYN 299

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKNANVKAHN-VKNHLWVFVNALIDNPAFDSQTKETL 372
            GGTH +   + + + + ++     KN  V   N V+ H  V V  +   P FDSQ+K  L
Sbjct: 300  GGTHCNAAMDILDSCLDSLSKNFKKNGKVVDTNRVQRHFTVLVFLIQTQPKFDSQSKARL 359

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TKTEDVR 427
                 S  +   + +  L+K   +   +E  ++  + + + +L K  G     +    + 
Sbjct: 360  V----STVTMPRVPKNTLEKYLERMPFLEAHVNSMDDQLANELNKEIGAGRRLSSKTLIS 415

Query: 428  GISKLEDANLA--GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
             I+KL DA  +   GRN    TLI+TEGDSAKALA+  LS   +   GVFPLRGKLLNVR
Sbjct: 416  AITKLVDATSSRPDGRNIR--TLIITEGDSAKALALNSLSSEQKKYCGVFPLRGKLLNVR 473

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
              +  ++    E+ ++   LGL+ G EY +   LRY  L++MTDQ               
Sbjct: 474  NKNLKRLKTCKELQDLFLSLGLELGKEYRSPAELRYQRLLVMTDQ--------------- 518

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVK--ATNKNG 602
                         D DGSHIKGL+IN   S WP LL+  P ++  F TPIVK   + K+ 
Sbjct: 519  -------------DADGSHIKGLVINAFESLWPKLLQNNPGYISLFSTPIVKIKVSGKSK 565

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            +V++F+S  D+  W+ +    ++ ++ KYYKGLGTST+ EGKEYF ++  +       D 
Sbjct: 566  EVIAFHSFRDFHRWQRA--HPSARYTAKYYKGLGTSTTAEGKEYFADMEKNIMQLT-VDA 622

Query: 663  QDGEAIELAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
            +D + ++  F   ++E RK+W+ +   F+    +D+ +K +   +FV+KE++ F++    
Sbjct: 623  RDHQLLDSVFDAAEVEWRKEWMTKANAFQGEIDIDRSKKTLTIPEFVHKEMVHFALVGNA 682

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            R+IP  VDGLKP QRKIL+   +R+  + +KVAQ SGY+SE SA+HHGE SL  TI+ MA
Sbjct: 683  RAIPHCVDGLKPSQRKILWAMLRRHNSEASKVAQLSGYISEASAFHHGEASLQETIVKMA 742

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+F G NNINLL P GQFG+R Q G D A+ RYIFT+LS   R LFP++DD LLDY++E+
Sbjct: 743  QNFTGGNNINLLVPEGQFGSRQQLGNDHAAPRYIFTKLSRFARLLFPEEDDPLLDYMDEE 802

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPM 895
            G  +EP  Y+PI+P +L NG+ GIG G+++ IP+++P D+ A VR ++NGE    ++  +
Sbjct: 803  GTFVEPHHYVPILPMLLCNGAVGIGFGFATTIPSFHPLDVSAAVRAMINGESAKQVVRNL 862

Query: 896  HPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID 955
             PW  GF GT+ +    E    +   G           I E+P     + +R  + S+  
Sbjct: 863  VPWAVGFQGTVRRGPDNE----FIAVGKYTAHPNGRFHISEIPWMTSIEAFRLHISSLAS 918

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
             +   ++    YS    +D ++ + + S+  T          L   I   N  +F   G 
Sbjct: 919  AD--VVQRIADYSGANHIDIDLIVRDGSL--TTWAECETDLALAQRIYI-NGTVFSPTGT 973

Query: 1016 IKKYDTP-EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
            +   D+    +L+  +  RL+ Y++R+  ++  +E++L +L++  +F+     G+I    
Sbjct: 974  LSPIDSDLSPVLQWHYDRRLDLYKRRRTRKIGLMEMDLARLQSTRKFVEHFRQGQI---- 1029

Query: 1075 RKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLL 1132
                D L                        ATD+T        V  G+  +D  +DY+L
Sbjct: 1030 ----DFL-----------------------NATDDTLHKT---CVKLGLVRVDESFDYIL 1059

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
               I   T    + L AD  K   ++++L++ TP  +W+ +LD  D    E ++
Sbjct: 1060 KKPITFFTRTSTEKLQADIAKTQAQIEELKRTTPVKMWLTELDKFDKTFQEYER 1113


>gi|398012922|ref|XP_003859654.1| mitochondrial DNA topoisomerase II [Leishmania donovani]
 gi|322497870|emb|CBZ32946.1| mitochondrial DNA topoisomerase II [Leishmania donovani]
          Length = 1236

 Score =  607 bits (1565), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 395/1194 (33%), Positives = 630/1194 (52%), Gaps = 125/1194 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + ++H+LLRP+ Y+GSIE     ++I++ E   M+  T+    GL KI DEIL+NA
Sbjct: 7    YKKLTPIDHVLLRPEMYVGSIETQPTPMYIFDPEKGRMVWETMRVNQGLLKIVDEILLNA 66

Query: 91   ADN---KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
            ADN    +   +   + + I    + I+V N G G+P+   +E  +Y+PE++FGHLLTSS
Sbjct: 67   ADNINNSKGSVRQTYISIHISDTGE-ITVENDGAGLPIVRSREHKMYIPEMVFGHLLTSS 125

Query: 148  NYDDNVKKTTGGRNGYGAKLTNIFSTEF-IIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            NY+++   TT GR+GYGAKLTNI ST+F ++   DG+   ++   +T++M   + P +++
Sbjct: 126  NYNNDSTSTTAGRHGYGAKLTNILSTKFSVVCRTDGR---EFHMSWTDHMRMATAPRVNR 182

Query: 207  CKEGD-NWTKVSFKPDLAKFNMTH--LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
                + N T+V F PD A F   +  +  D+  ++ KR++DLA    K ++V LN     
Sbjct: 183  VDPKEKNVTRVKFMPDYAHFGFPNASISLDMKRVLHKRIMDLAAMFSK-IEVRLNNVPFG 241

Query: 264  VKSFAEYVDMY----------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIK 313
             ++F +Y  +Y          P+     +   N        L++   + V  VNG+ T  
Sbjct: 242  FRTFTDYARLYSLPGLDGSMPPEPFV--YTSPNGSVAYVPQLTQSPKRIVGVVNGVVTYN 299

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKNANVKAHN-VKNHLWVFVNALIDNPAFDSQTKETL 372
            GGTH +   + + + + ++     KN  V   N V+ H  V V  +   P FDSQ+K  L
Sbjct: 300  GGTHCNAAMDILDSCLDSLSKNFKKNGKVVDTNRVQRHFTVLVFLIQTQPKFDSQSKARL 359

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TKTEDVR 427
                 S  +   + +  L+K   +   +E  ++  + + + +L K  G     +    + 
Sbjct: 360  V----STVTMPRVPKNTLEKYLERMPFLEAHVNSMDDQLANELNKEIGAGRRLSSKTLIS 415

Query: 428  GISKLEDANLA--GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
             I+KL DA  +   GRN    TLI+TEGDSAKALA+  LS   +   GVFPLRGKLLNVR
Sbjct: 416  AITKLVDATSSRPDGRNIR--TLIITEGDSAKALALNSLSSEQKKYCGVFPLRGKLLNVR 473

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
              +  ++    E+ ++   LGL+ G EY +   LRY  L++MTDQ               
Sbjct: 474  NKNLKRLKTCKELQDLFLSLGLELGKEYRSPAELRYQRLLVMTDQ--------------- 518

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVK--ATNKNG 602
                         D DGSHIKGL+IN   S WP LL+  P ++  F TPIVK   + K+ 
Sbjct: 519  -------------DADGSHIKGLVINAFESLWPKLLQNNPGYISLFSTPIVKIKVSGKSK 565

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            +V++F+S  D+  W+ +    ++ ++ KYYKGLGTST+ EGKEYF ++  +       D 
Sbjct: 566  EVIAFHSFRDFHRWQRA--HPSARYTAKYYKGLGTSTTAEGKEYFADMEKNIMQLT-VDA 622

Query: 663  QDGEAIELAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
            +D + ++  F   ++E RK+W+ +   F+    +D+ +K +   +FV+KE++ F++    
Sbjct: 623  RDHQLLDSVFDAAEVEWRKEWMTKANAFQGEIDIDRSKKTLTIPEFVHKEMVHFALVGNA 682

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            R+IP  VDGLKP QRKIL+   +R+  + +KVAQ SGY+SE SA+HHGE SL  TI+ MA
Sbjct: 683  RAIPHCVDGLKPSQRKILWAMLRRHNSEASKVAQLSGYISEASAFHHGEASLQETIVKMA 742

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+F G NNINLL P GQFG+R Q G D A+ RYIFT+LS   R LFP++DD LLDY++E+
Sbjct: 743  QNFTGGNNINLLVPEGQFGSRQQLGNDHAAPRYIFTKLSRFARLLFPEEDDPLLDYMDEE 802

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPM 895
            G  +EP  Y+PI+P +L NG+ GIG G+++ IP+++P D+ A VR ++NGE    ++  +
Sbjct: 803  GTFVEPHHYVPILPMLLCNGAVGIGFGFATTIPSFHPLDVSAAVRAMINGESAKQVVRNL 862

Query: 896  HPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID 955
             PW  GF GT+ +    E    +   G           I E+P     + +R  + S+  
Sbjct: 863  VPWAVGFQGTVRRGPDNE----FIAVGKYTAHPNGRFHISEIPWMTSIEAFRLHISSLAS 918

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
             +   ++    YS    +D ++ + + S+  T          L   I   N  +F   G 
Sbjct: 919  AD--VVQRIADYSGANHIDIDLIVRDGSL--TTWAECETDLALAQRIYI-NGTVFSPTGT 973

Query: 1016 IKKYDTP-EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
            +   D+    +L+  +  RL+ Y++R+  ++  +E++L +L++  +F+     G+I    
Sbjct: 974  LSPIDSDLSPVLQWHYDRRLDLYKRRRTRKIGLMEMDLARLQSTRKFVEHFRQGQI---- 1029

Query: 1075 RKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLL 1132
                D L                        ATD+T        V  G+  +D  +DY+L
Sbjct: 1030 ----DFL-----------------------NATDDTLHKT---CVKLGLVRVDESFDYIL 1059

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
               I   T    + L AD  K   ++++L++ TP  +W+ +LD  D    E ++
Sbjct: 1060 KKPITFFTRTSTEKLQADIAKTQAQIEELKRTTPVKMWLTELDKFDKTFQEYER 1113


>gi|146082133|ref|XP_001464455.1| mitochondrial DNA topoisomerase II [Leishmania infantum JPCM5]
 gi|134068547|emb|CAM66843.1| mitochondrial DNA topoisomerase II [Leishmania infantum JPCM5]
          Length = 1236

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 395/1194 (33%), Positives = 630/1194 (52%), Gaps = 125/1194 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + ++H+LLRP+ Y+GSIE     ++I++ E   M+  T+    GL KI DEIL+NA
Sbjct: 7    YKKLTPIDHVLLRPEMYVGSIETQPTPMYIFDPEKGRMVWETMRVNQGLLKIVDEILLNA 66

Query: 91   ADN---KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
            ADN    +   +   + + I    + I+V N G G+P+   +E  +Y+PE++FGHLLTSS
Sbjct: 67   ADNINNSKGSVRQTYISIHISDTGE-ITVENDGAGLPIVRSREHKMYIPEMVFGHLLTSS 125

Query: 148  NYDDNVKKTTGGRNGYGAKLTNIFSTEF-IIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            NY+++   TT GR+GYGAKLTNI ST+F ++   DG+   ++   +T++M   + P +++
Sbjct: 126  NYNNDSTSTTAGRHGYGAKLTNILSTKFSVVCRTDGR---EFHMSWTDHMRMATAPRVNR 182

Query: 207  CKEGD-NWTKVSFKPDLAKFNMTH--LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
                + N T+V F PD A F   +  +  D+  ++ KR++DLA    K ++V LN     
Sbjct: 183  VDPKEKNVTRVKFMPDYAHFGFPNASISLDMKRVLHKRIMDLAAMFSK-IEVRLNNVPFG 241

Query: 264  VKSFAEYVDMY----------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIK 313
             ++F +Y  +Y          P+     +   N        L++   + V  VNG+ T  
Sbjct: 242  FRTFTDYARLYSLPGLDGSMPPEPFV--YTSPNGSVAYVPQLTQSPKRIVGVVNGVVTYN 299

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKNANVKAHN-VKNHLWVFVNALIDNPAFDSQTKETL 372
            GGTH +   + + + + ++     KN  V   N V+ H  V V  +   P FDSQ+K  L
Sbjct: 300  GGTHCNAAMDILDSCLDSLSKNFKKNGKVVDTNRVQRHFTVLVFLIQTQPKFDSQSKARL 359

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TKTEDVR 427
                 S  +   + +  L+K   +   +E  ++  + + + +L K  G     +    + 
Sbjct: 360  V----STVTMPRVPKNTLEKYLERMPFLEAHVNSMDDQLANELNKEIGAGRRLSSKTLIS 415

Query: 428  GISKLEDANLA--GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
             I+KL DA  +   GRN    TLI+TEGDSAKALA+  LS   +   GVFPLRGKLLNVR
Sbjct: 416  AITKLVDATSSRPDGRNIR--TLIITEGDSAKALALNSLSSEQKKYCGVFPLRGKLLNVR 473

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
              +  ++    E+ ++   LGL+ G EY +   LRY  L++MTDQ               
Sbjct: 474  NKNLKRLKTCKELQDLFLSLGLELGKEYRSPAELRYQRLLVMTDQ--------------- 518

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVK--ATNKNG 602
                         D DGSHIKGL+IN   S WP LL+  P ++  F TPIVK   + K+ 
Sbjct: 519  -------------DADGSHIKGLVINAFESLWPKLLQNNPGYISLFSTPIVKIKVSGKSK 565

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            +V++F+S  D+  W+ +    ++ ++ KYYKGLGTST+ EGKEYF ++  +       D 
Sbjct: 566  EVIAFHSFRDFHRWQRA--HPSARYTAKYYKGLGTSTTAEGKEYFADMEKNIMQLT-VDA 622

Query: 663  QDGEAIELAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
            +D + ++  F   ++E RK+W+ +   F+    +D+ +K +   +FV+KE++ F++    
Sbjct: 623  RDHQLLDSVFDAAEVEWRKEWMTKANAFQGEIDIDRSKKTLTIPEFVHKEMVHFALVGNA 682

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            R+IP  VDGLKP QRKIL+   +R+  + +KVAQ SGY+SE SA+HHGE SL  TI+ MA
Sbjct: 683  RAIPHCVDGLKPSQRKILWAMLRRHNSEASKVAQLSGYISEASAFHHGEASLQETIVKMA 742

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+F G NNINLL P GQFG+R Q G D A+ RYIFT+LS   R LFP++DD LLDY++E+
Sbjct: 743  QNFTGGNNINLLVPEGQFGSRQQLGNDHAAPRYIFTKLSRFARLLFPEEDDPLLDYMDEE 802

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPM 895
            G  +EP  Y+PI+P +L NG+ GIG G+++ IP+++P D+ A VR ++NGE    ++  +
Sbjct: 803  GTFVEPHHYVPILPMLLCNGAVGIGFGFATTIPSFHPLDVSAAVRAMINGESAKQVVRNL 862

Query: 896  HPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID 955
             PW  GF GT+ +    E    +   G           I E+P     + +R  + S+  
Sbjct: 863  VPWAVGFQGTVRRGPDNE----FIAVGKYTAHPNGRFHISEIPWMTSIEAFRLHISSLAS 918

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
             +   ++    YS    +D ++ + + S+  T          L   I   N  +F   G 
Sbjct: 919  AD--VVQRIADYSGANHIDIDLIVRDGSL--TTWAECETDLALAQRIYI-NGTVFSPTGT 973

Query: 1016 IKKYDTP-EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
            +   D+    +L+  +  RL+ Y++R+  ++  +E++L +L++  +F+     G+I    
Sbjct: 974  LSPIDSDLSPVLQWHYDRRLDLYKRRRTRKIGLMEMDLARLQSTRKFVEHFRQGQI---- 1029

Query: 1075 RKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLL 1132
                D L                        ATD+T        V  G+  +D  +DY+L
Sbjct: 1030 ----DFL-----------------------NATDDTLHKT---CVKLGLVRVDESFDYIL 1059

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
               I   T    + L AD  K   ++++L++ TP  +W+ +LD  D    E ++
Sbjct: 1060 KKPITFFTRTSTEKLQADIAKTQAQIEELKRTTPVKMWLTELDKFDKTFQEYER 1113


>gi|119581065|gb|EAW60661.1| topoisomerase (DNA) II alpha 170kDa, isoform CRA_a [Homo sapiens]
          Length = 837

 Score =  607 bits (1564), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 334/726 (46%), Positives = 461/726 (63%), Gaps = 62/726 (8%)

Query: 493  LNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
            + N+EI NI KI+GL+    Y   +++K+LRYG +MIMTDQ                   
Sbjct: 1    MENAEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ------------------- 41

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYS 609
                     D DGSHIKGLLINFIH  WPSLL+   FL EFITPIVK + KN + ++FYS
Sbjct: 42   ---------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYS 90

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            +P++E WK S   N   W +KYYKGLGTSTSKE KEYF ++  H+  F +   +D  AI 
Sbjct: 91   LPEFEEWKSS-TPNHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAIS 149

Query: 670  LAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMAD 717
            LAFSKK+I+ RK+WL  F            P ++L  Q   Y+ Y+DF+NKELILFS +D
Sbjct: 150  LAFSKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSD 209

Query: 718  LQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
             +RSIPSMVDGLKPGQRK+LF  FKRN  +E KVAQ +G V+E S+YHHGE SL  TI+ 
Sbjct: 210  NERSIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIIN 269

Query: 778  MAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLN 837
            +AQ+FVGSNN+NLLQP GQFGTR  GGKD+AS RYIFT LS + R LFP  DD  L +L 
Sbjct: 270  LAQNFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLY 329

Query: 838  EDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHP 897
            +D Q++EP WY+PIIP VL+NG+EGIGTGWS  IPN++ R+IV N+RRL++GE   PM P
Sbjct: 330  DDNQRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMLP 389

Query: 898  WYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII-- 954
             Y+ F GTIE+ A  +    Y ++G +  +N TT+ I ELP+R WTQ Y+E  LE ++  
Sbjct: 390  SYKNFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPVRTWTQTYKEQVLEPMLNG 445

Query: 955  -DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
             ++    I  +R+Y  DTTV F V ++EE +   ++ GL K FKL T+++ ++M LFD  
Sbjct: 446  TEKTPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHV 505

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G +KKYDT   IL +FF +RL++Y  RK+  L  L  E  KL N+ RFIL  ++G+I++ 
Sbjct: 506  GCLKKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIE 565

Query: 1074 NRKRTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSID 1127
            N+ + +L+  L Q+G+   P         K  +      +D  +E+E++  V +   +  
Sbjct: 566  NKPKKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTDSGPT-- 623

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKS 1187
            ++YLL M +  LT EK   L   R++  +E+D L++ +P  LW +DL     +L+ ++  
Sbjct: 624  FNYLLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATFIEELEAVEAK 683

Query: 1188 DARAEE 1193
            + + E+
Sbjct: 684  EKQDEQ 689


>gi|9624859|gb|AAF86355.1| DNA Topoisomerase II [Leishmania infantum]
          Length = 1236

 Score =  606 bits (1563), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 395/1194 (33%), Positives = 630/1194 (52%), Gaps = 125/1194 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + ++H+LLRP+ Y+GSIE     ++I++ E   M+  T+    GL KI DEIL+NA
Sbjct: 7    YKKLTPIDHVLLRPEMYVGSIETQPTPMYIFDPEKGRMVWETMRVNQGLLKIVDEILLNA 66

Query: 91   ADN---KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
            ADN    +   +   + + I    + I+V N G G+P+   +E  +Y+PE++FGHLLTSS
Sbjct: 67   ADNINNSKGSVRQTYISIHISDTGE-ITVENDGAGLPIVRSREHKMYIPEMVFGHLLTSS 125

Query: 148  NYDDNVKKTTGGRNGYGAKLTNIFSTEF-IIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            NY+++   TT GR+GYGAKLTNI ST+F ++   DG+   ++   +T++M   + P +++
Sbjct: 126  NYNNDSTSTTAGRHGYGAKLTNILSTKFSVVCRTDGR---EFHMSWTDHMRMATAPRVNR 182

Query: 207  CKEGD-NWTKVSFKPDLAKFNMTH--LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
                + N T+V F PD A F   +  +  D+  ++ KR++DLA    K ++V LN     
Sbjct: 183  VDPKEKNVTRVKFMPDYAHFGFPNASISLDMKRVLHKRIMDLAAMFSK-IEVRLNNVPFG 241

Query: 264  VKSFAEYVDMY----------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIK 313
             ++F +Y  +Y          P+     +   N        L++   + V  VNG+ T  
Sbjct: 242  FRTFTDYARLYSLPGLDGSMPPEPFV--YTSPNGSVAYVPQLTQSPKRIVGVVNGVVTYN 299

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKNANVKAHN-VKNHLWVFVNALIDNPAFDSQTKETL 372
            GGTH +   + + + + ++     KN  V   N V+ H  V V  +   P FDSQ+K  L
Sbjct: 300  GGTHCNAAMDILDSCLDSLSKNFKKNGKVVDTNRVQRHFTVLVFLIQTQPKFDSQSKARL 359

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TKTEDVR 427
                 S  +   + +  L+K   +   +E  ++  + + + +L K  G     +    + 
Sbjct: 360  V----STVTMPRVPKNTLEKYLERMPFLEAHVNSMDDQLANELNKEIGAGRRLSSKTLIS 415

Query: 428  GISKLEDANLA--GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
             I+KL DA  +   GRN    TLI+TEGDSAKALA+  LS   +   GVFPLRGKLLNVR
Sbjct: 416  AITKLVDATSSRPDGRNIR--TLIITEGDSAKALALNSLSSEQKKYCGVFPLRGKLLNVR 473

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
              +  ++    E+ ++   LGL+ G EY +   LRY  L++MTDQ               
Sbjct: 474  NKNLKRLKTCKELQDLFLSLGLELGKEYRSPAELRYQRLLVMTDQ--------------- 518

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVK--ATNKNG 602
                         D DGSHIKGL+IN   S WP LL+  P ++  F TPIVK   + K+ 
Sbjct: 519  -------------DADGSHIKGLVINAFESLWPKLLQNNPGYISLFSTPIVKIKVSGKSK 565

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            +V++F+S  D+  W+ +    ++ ++ KYYKGLGTST+ EGKEYF ++  +       D 
Sbjct: 566  EVIAFHSFRDFHRWQRA--HPSARYTAKYYKGLGTSTTAEGKEYFADMEKNIMQLT-VDA 622

Query: 663  QDGEAIELAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
            +D + ++  F   ++E RK+W+ +   F+    +D+ +K +   +FV+KE++ F++    
Sbjct: 623  RDHQLLDSVFDAAEVEWRKEWMTKANAFQGEIDIDRSKKTLTIPEFVHKEMVHFALVGNA 682

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            R+IP  VDGLKP QRKIL+   +R+  + +KVAQ SGY+SE SA+HHGE SL  TI+ MA
Sbjct: 683  RAIPHCVDGLKPSQRKILWAMLRRHNSEASKVAQLSGYISEASAFHHGEASLQETIVKMA 742

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+F G NNINLL P GQFG+R Q G D A+ RYIFT+LS   R LFP++DD LLDY++E+
Sbjct: 743  QNFTGGNNINLLVPEGQFGSRQQLGNDHAAPRYIFTKLSRFARLLFPEEDDPLLDYMDEE 802

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPM 895
            G  +EP  Y+PI+P +L NG+ GIG G+++ IP+++P D+ A VR ++NGE    ++  +
Sbjct: 803  GTFVEPHHYVPILPMLLCNGAVGIGFGFATTIPSFHPLDVSAAVRGMINGESAKQVVRNI 862

Query: 896  HPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID 955
             PW  GF GT+ +    E    +   G           I E+P     + +R  + S+  
Sbjct: 863  VPWAVGFQGTVRRGPDNE----FIAVGKYTAHPNGRFHISEIPWMTSIEAFRLHISSLAS 918

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
             +   ++    YS    +D ++ + + S+  T          L   I   N  +F   G 
Sbjct: 919  AD--VVQRIADYSGANHIDIDLIVRDGSL--TTWAECETDLALAQRIYI-NGTVFSPTGT 973

Query: 1016 IKKYDTP-EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
            +   D+    +L+  +  RL+ Y++R+  ++  +E++L +L++  +F+     G+I    
Sbjct: 974  LNPIDSDLSPVLQWHYDRRLDLYKRRRTRKIGLMEMDLARLQSTRKFVEHFRQGQI---- 1029

Query: 1075 RKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLL 1132
                D L                        ATD+T        V  G+  +D  +DY+L
Sbjct: 1030 ----DFL-----------------------NATDDTLHKT---CVKLGLVRVDESFDYIL 1059

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
               I   T    + L AD  K   ++++L++ TP  +W+ +LD  D    E ++
Sbjct: 1060 KKPITFFTRTSTEKLQADIAKTQAQIEELKRTTPVKMWLTELDKFDKTFQEYER 1113


>gi|325588260|gb|ADZ31962.1| DNA topoisomerase II [Trypanosoma rangeli]
          Length = 1224

 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 405/1197 (33%), Positives = 623/1197 (52%), Gaps = 125/1197 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + ++H+L+RP+ Y+GS+E  + A+++++ +   M+  T+    GL K+ DEIL+NA
Sbjct: 7    YKKLTPIDHVLVRPEMYVGSVETISTAMFVFDHDKGRMVWDTVKLNHGLLKVVDEILLNA 66

Query: 91   ADN-KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            +DN   +  +M  ++V I  E   I++ N G G+P+   +E  +Y+PE++FGHLLTSSNY
Sbjct: 67   SDNLANKSARMTYIRVHI-TEFGEITIENDGAGIPIVRSKEHKLYIPEMVFGHLLTSSNY 125

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DD  + T  GR+GYGAKLTNI S  F +      R  ++   + ++M K + P +S    
Sbjct: 126  DDASQSTVAGRHGYGAKLTNILSHRFSVFCRTKGR--EFHMTWQDHMRKATAPRVS---N 180

Query: 210  GD----NWTKVSFKPDLAKFNM--THLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
            GD    N T+V F PD  +F +    +  D+  ++ KRV+DLA     ++++ LNG    
Sbjct: 181  GDPKEKNVTRVKFLPDYERFGLKENKISHDMKRVLHKRVMDLAAMF-PNIEISLNGVPFG 239

Query: 264  VKSFAEYVDMYPKSVTR--------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGG 315
             KSF +Y  +Y   +           +E  N       +L+ G  +  S VNG+ T  GG
Sbjct: 240  FKSFHDYALLYSTPIAGGERPPAPFVYESRNGAIAFVPSLTAGIRRIFSVVNGVVTHNGG 299

Query: 316  THVDYVANQVANHVMAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            TH +  A  +    +  V +  K +N  +  + V  H  + V  +   P FDSQ K  L 
Sbjct: 300  THCN-AAQDILQSSLEYVERALKKENKVIDTNRVLRHFTILVFLVQVQPRFDSQNKARLV 358

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED-VRGISKL 432
               +      +   EFL ++      V T+      + +K++       ++  +  I+KL
Sbjct: 359  SAPTMPRVPSQELTEFLLRMPYLEAHVNTMTGQLAQELNKEIGAGRRMSSKSLISSITKL 418

Query: 433  EDANLAGGRNSEQC--TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
             DA     R   +C  TLI+TEGDSAKALA   L+   +   GV+PLRGKLLNVR  +  
Sbjct: 419  VDATTT--RRDPKCVRTLIVTEGDSAKALAQNSLTSDQKRYTGVYPLRGKLLNVRNKNLR 476

Query: 491  QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
            ++ N  E+  +   LGL+    Y     LRY  L++MTDQ                    
Sbjct: 477  RLKNRKELQELFCALGLELEKVYKGADELRYQRLLLMTDQ-------------------- 516

Query: 551  TFCFMLAQDHDGSHIKGLLINFIHSFWPSLL-KIPSFLVEFITPIVKATNKNGKVLSFYS 609
                    D DGSHIKGL+IN   S WPSLL + P F+  F TPIVK   ++    SF+S
Sbjct: 517  --------DADGSHIKGLVINAFESLWPSLLIRNPGFISIFSTPIVKVRLRDKSTHSFFS 568

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            + ++  W++ + GN   ++ KYYKGLGTST+ EGKEYF+++  H    +  D  D + ++
Sbjct: 569  LKEFHKWQK-MHGNVP-YTAKYYKGLGTSTTAEGKEYFKDMDKHTMRLML-DRNDHKLLD 625

Query: 670  LAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
              F  +++E RK W+ +   +     +D+ +K +  SDFV+KE++ F++A   R++   V
Sbjct: 626  SVFDSQEVEWRKDWMTKANAYTGEVDIDRSKKTLTLSDFVHKEMVHFALAGNARALAHAV 685

Query: 727  DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
            DGLKP QRKIL+   +R+  + AKVAQ SGY+SE SA+HHGE SL  TI+ MAQ+F G N
Sbjct: 686  DGLKPSQRKILWALLRRSSNEAAKVAQLSGYISEASAFHHGEMSLQETIIKMAQNFTGGN 745

Query: 787  NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
            NINLL P GQFG+R Q G D A+ARYIFT+LS   R LFP +D+ LLDY+ E+GQQ+EP 
Sbjct: 746  NINLLVPEGQFGSRQQIGNDHAAARYIFTKLSSFARILFPSEDESLLDYVVEEGQQVEPN 805

Query: 847  WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHPWYRGF 902
             Y+PI+P +L NGS GIG G++S IP ++P D+ A VR ++NGE    ++  + PW  G+
Sbjct: 806  HYVPILPLLLCNGSVGIGFGFASNIPPFHPLDVSAAVRSMINGESAKVVVRRLVPWAVGY 865

Query: 903  GGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID-QNDSFI 961
             G I +    E    +   G      +  + + ELP   WT     F   I    +   +
Sbjct: 866  QGEIRRGPEGE----FIAAGSYNYYLDGRVHVTELP---WTLSIEAFRGHISHLASKDVV 918

Query: 962  RGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDT 1021
            +    YS  T VD ++ L++ ++  T       +  L   +   N  +F   GV+    T
Sbjct: 919  QRIADYSGATHVDIDLELTKGAI--TTYAECESELMLVQRVYI-NGTVFSPNGVL----T 971

Query: 1022 PEQ-----ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            P +     +L+  +  RL+ Y+KR++  L  LE EL + ++ + F+    +G+I   N  
Sbjct: 972  PLEGDLAPVLQWHYDRRLDLYKKRRQRNLGLLEAELAREKSTLIFVNHFRSGKIDFVN-- 1029

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLLSM 1134
                                         ATDE+     +     G+  +D  YDY+L  
Sbjct: 1030 -----------------------------ATDESLVKTCSKL---GMVRVDDAYDYVLRK 1057

Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARA 1191
             I   T   ++ L      + + ++ L+K TP  LW+ +LD  D   +E +K+   A
Sbjct: 1058 PITFYTRTSLENLGRKIIDIEKRIEKLKKTTPVQLWLNELDRFDRAFEEYEKTTVTA 1114


>gi|154334646|ref|XP_001563570.1| mitochondrial DNA topoisomerase II [Leishmania braziliensis
            MHOM/BR/75/M2904]
 gi|134060591|emb|CAM42140.1| mitochondrial DNA topoisomerase II [Leishmania braziliensis
            MHOM/BR/75/M2904]
          Length = 1239

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 396/1197 (33%), Positives = 629/1197 (52%), Gaps = 131/1197 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K S ++H+LLRP+ Y+GSIE     ++I++ E   M+  T+    GL KI DEIL+NA
Sbjct: 7    YKKLSPIDHVLLRPEMYVGSIETQPTPMYIFDPEKGKMVWETMRVNQGLLKIVDEILLNA 66

Query: 91   ADN---KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
            ADN    +   +   + + I    + I+V N G G+P+   +E  +Y+PE++FGHLLTSS
Sbjct: 67   ADNINNSKGSVRQTYISISISDTGE-ITVENDGAGLPIVRSREHKIYIPEMVFGHLLTSS 125

Query: 148  NYDDNVKKTTGGRNGYGAKLTNIFSTEF--IIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            NY+++   TT GR+GYGAKLTNI ST+F  I  TA     +++   +T++M   + P +S
Sbjct: 126  NYNNDSTSTTAGRHGYGAKLTNILSTKFSVICRTAG----REFHMSWTDHMRMATAPRVS 181

Query: 206  KCKEGD-NWTKVSFKPDLAKFNMTH--LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
            +    + N T+V F PD A F   +  +  D+  ++ KR++DLA    K ++V LN    
Sbjct: 182  RVDPKEKNVTRVKFMPDYAHFGFPNASISLDMKRVLHKRIMDLAAMFSK-IEVRLNNVPF 240

Query: 263  PVKSFAEYVDMY----PKSVTR----FHERVNERWEICVTLSEGQFQQVSFVNGIATIKG 314
              ++F +Y  +Y    P   T      H   N        L++   + V  VNG+ T  G
Sbjct: 241  GFETFTDYARLYSLPGPNGSTPPEPFVHTSPNGSVAYVPQLTQSPKRIVGVVNGVVTYNG 300

Query: 315  GTHVDYVANQVANHVMAVV-NKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
            GTH +   + + + + ++  N K +   V  + V+ H  V V  +   P FDSQ+K  L 
Sbjct: 301  GTHCNAAIDILDSCLDSLSRNFKKEGKVVDTNRVQRHFTVLVFLIQAQPKFDSQSKARLV 360

Query: 374  LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TKTEDVRG 428
                S  +   + +  L+K       +E  ++  + + + +L K  G     +    +  
Sbjct: 361  ----STVTMPRVPKNTLEKYLETMPFLEAHVNSMDDQLANELNKEIGAGRRLSSKTLISS 416

Query: 429  ISKLEDANLA--GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
            I+KL DA  +   GRN    TLI+TEGDSAKALA+  LS   +   GVFPLRGKLLNVR 
Sbjct: 417  ITKLVDATSSRPDGRNIR--TLIITEGDSAKALALNSLSSDQKKYCGVFPLRGKLLNVRN 474

Query: 487  ASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIF 546
             +  ++    E+ ++   LGL+ G EY     LRY  L++MTDQ                
Sbjct: 475  KNLKRLKMCKELQDLFLALGLELGKEYRTPDELRYQRLLVMTDQ---------------- 518

Query: 547  AWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVK--ATNKNGK 603
                        D DGSHIKGL+IN   S WP+LL+  P ++  F TPIVK   + K+ +
Sbjct: 519  ------------DADGSHIKGLVINAFESLWPTLLQNNPGYISLFSTPIVKIKVSGKSKE 566

Query: 604  VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
            V++F+S+ D+  W+ +     + ++ KYYKGLGTST+ EGKEYF ++  +       D +
Sbjct: 567  VIAFHSLRDFHRWQRA--HPTARYTAKYYKGLGTSTTAEGKEYFADMEKNIMRLT-VDAK 623

Query: 664  DGEAIELAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQR 720
            D + ++  F   ++E RK+W+ +   F+    +D+ +K +   +FV+KE++ F++    R
Sbjct: 624  DHQLLDSVFDAAEVEWRKEWMTKANAFQGEIDIDRSKKSLTIPEFVHKEMVHFALVGNAR 683

Query: 721  SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
            +IP  VDGLKP QRKIL+   +R+  + +KVAQ SGY+SE SA+HHGE SL  TI+ MAQ
Sbjct: 684  AIPHCVDGLKPSQRKILWAMLRRHSSEASKVAQLSGYISEASAFHHGEVSLQETIVKMAQ 743

Query: 781  DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
            +F G NNINLL P GQFG+R Q G D A+ RYIFT+LS   R LFP++DD LLDY++E+G
Sbjct: 744  NFTGGNNINLLVPEGQFGSRQQLGNDHAAPRYIFTKLSRFARLLFPEEDDPLLDYMDEEG 803

Query: 841  QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMH 896
              +EP  Y+PI+P +L NG+ GIG G+++ IP ++P D+ A VR ++NGE    ++  + 
Sbjct: 804  TPVEPHHYVPILPMLLCNGAVGIGFGFATTIPPFHPLDVSAAVRAMINGESAKQVVRNLV 863

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ 956
            PW  GF GT+ +    E    +   G           I E+P     + +R  + S+   
Sbjct: 864  PWAVGFQGTVRRGPDDE----FIAVGKYTAHPNGRFHISEIPWMTSIEAFRLHISSL--A 917

Query: 957  NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQE----GLLKKFKLTTTISTSNMHLFDS 1012
            N   ++    YS    +D ++ + + ++    +      L ++  +  T+       F  
Sbjct: 918  NTDVVQRIADYSGANHIDIDLIVRDGALTTWAECEADLALAQRVHINGTV-------FSP 970

Query: 1013 KGVIKKYDTP-EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIV 1071
             G +   D+    +L+  +  RL+ Y++R+  ++  +E++L +L++  +F+     G+I 
Sbjct: 971  TGTLSPIDSNLAPVLQWHYDRRLDLYKRRRTRKIGLMEMDLARLKSTRKFVEHFRQGQI- 1029

Query: 1072 VNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YD 1129
                   D L                        ATD+T        V  G+  +D  +D
Sbjct: 1030 -------DFL-----------------------NATDDTLTKT---CVKLGLVRVDESFD 1056

Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
            Y+L   I   T    + L  D  K   ++++L++ TP  +W+ +LD  D    E ++
Sbjct: 1057 YILKKPITFFTRTSTEKLQEDIAKTQAQIEELKRTTPVRMWLTELDKFDKTFQEYER 1113


>gi|157866980|ref|XP_001682045.1| mitochondrial DNA topoisomerase II [Leishmania major strain Friedlin]
 gi|68125496|emb|CAJ03357.1| mitochondrial DNA topoisomerase II [Leishmania major strain Friedlin]
          Length = 1236

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 396/1194 (33%), Positives = 628/1194 (52%), Gaps = 125/1194 (10%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + ++H+LLRP+ Y+GSIE     ++I++ E   M+  T+    GL KI DEIL+NA
Sbjct: 7    YKKLTPIDHVLLRPEMYVGSIETQPTPMYIFDPEKGRMVWETMRVNQGLLKIVDEILLNA 66

Query: 91   ADN---KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
            ADN    +   +   + + I    + I+V N G G+P+   +E  +Y+PE++FGHLLTSS
Sbjct: 67   ADNINNSKGSVRQTYINIHISDTGE-ITVENDGAGLPIVRSREHKMYIPEMVFGHLLTSS 125

Query: 148  NYDDNVKKTTGGRNGYGAKLTNIFSTEF-IIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            NY+++   TT GR+GYGAKLTNI ST+F ++   DG+   ++   +T++M   + P +++
Sbjct: 126  NYNNDSTSTTAGRHGYGAKLTNILSTKFSVVCRTDGR---EFHMSWTDHMRMATAPRVNR 182

Query: 207  CKEGD-NWTKVSFKPDLAKFNM--THLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
                + N T+V F PD A F      +  D+  ++ KRV+DLA    K ++V LN     
Sbjct: 183  VDPKEKNVTRVKFMPDYAHFGFPSASISLDMKRVLHKRVMDLAAMFSK-IEVRLNNVPFG 241

Query: 264  VKSFAEYVDMY----------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIK 313
             ++F +Y  +Y          P+     +   N        L++   + VS VNG+ T  
Sbjct: 242  FRTFTDYAGLYSLPGLDGSMPPEPFV--YTSPNGSVAYVPQLTQSPKRIVSVVNGVVTYN 299

Query: 314  GGTHVDYVANQVANHVMAVVNKKNKNANVKAHN-VKNHLWVFVNALIDNPAFDSQTKETL 372
            GGTH +   + +   + ++     KN  V   N V+ H  V V  +   P FDSQ+K  L
Sbjct: 300  GGTHCNAAMDILDACLDSLSKNFKKNGKVVDTNRVQRHFTVLVFLVQAQPKFDSQSKARL 359

Query: 373  TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TKTEDVR 427
                 S  +   + +  L+K   +   +E  ++  + + + +L K  G     +    + 
Sbjct: 360  V----STVTMPRVPKNTLEKYLERMPFLEAHVNSMDDQLTNELNKEIGAGRRLSSKTLIS 415

Query: 428  GISKLEDANLA--GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
             I+KL DA  +   GRN    TLI+TEGDSAKALA+  LS   +   GVFPLRGKLLNVR
Sbjct: 416  SITKLVDATSSRPDGRNIR--TLIITEGDSAKALALNSLSSEQKKYCGVFPLRGKLLNVR 473

Query: 486  EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
              +  ++    E+ ++   LGL+ G EY +   LRY  L++MTDQ               
Sbjct: 474  NKNLKRLKTCKELQDLFLSLGLELGKEYRSPAELRYQRLLVMTDQ--------------- 518

Query: 546  FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVK--ATNKNG 602
                         D DGSHIKGL+IN   S WP LL+  P ++  F TPIVK   + K+ 
Sbjct: 519  -------------DADGSHIKGLVINAFESLWPKLLQNNPGYISLFSTPIVKIKVSGKSK 565

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            + ++F+S  D+  W+ +    ++ ++ KYYKGLGTST+ EGKEYF ++  +       D 
Sbjct: 566  EAIAFHSFRDFHRWQRA--HPSARYTAKYYKGLGTSTTAEGKEYFADMEKNVMQLT-VDA 622

Query: 663  QDGEAIELAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
            +D + ++  F   ++E RK+W+ +   F+    +D+ +K +   +FV+KE++ F++    
Sbjct: 623  RDHQLLDSVFDAAEVEWRKEWMTKANAFQGEVDIDRSKKTLTIPEFVHKEMVHFALVGNA 682

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
            R+IP  VDGLKP QRKIL+   +R+  + +KVAQ SGY+SE SA+HHGE SL  TI+ MA
Sbjct: 683  RAIPHCVDGLKPSQRKILWAMLRRHNSEASKVAQLSGYISEASAFHHGEASLQETIVKMA 742

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            Q+F G NNINLL P GQFG+R Q G D A+ RYIFT+LS   R LFP++DD LLDY++E+
Sbjct: 743  QNFTGGNNINLLVPEGQFGSRQQLGSDHAAPRYIFTKLSRFARLLFPEEDDPLLDYMDEE 802

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPM 895
            G  +EP  Y+PI+P +L NG+ GIG G+++ IP+++P D+ A VR ++NGE    ++  +
Sbjct: 803  GTFVEPHHYVPILPMLLCNGAVGIGFGFATTIPSFHPLDVSAAVRAMINGESAKQVVRNL 862

Query: 896  HPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIID 955
             PW  GF GT+ +    E    +   G           I E+P     + +R  + S+  
Sbjct: 863  VPWAVGFQGTVRRGPDNE----FIAVGKYTAHPNGRFHISEIPWMTSIEAFRLHISSLAS 918

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
             +   ++    YS    +D ++ + + S+  T          L   I   N  +F   G 
Sbjct: 919  AD--VVQRIADYSGANHIDIDLIVRDGSL--TTWAECETDLALAQRIYI-NGTVFSPAGT 973

Query: 1016 IKKYDTP-EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
            +   D+    +L+  +  RL+ Y++R+  ++  +E++L +L++  +F+     G+I    
Sbjct: 974  LSPIDSDLSPVLQWHYDRRLDLYKRRRTRKIGLMEMDLARLQSTRKFVEHFRQGQI---- 1029

Query: 1075 RKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLL 1132
                D L                        ATD+T        V  G+  +D  +DY+L
Sbjct: 1030 ----DFL-----------------------NATDDTLHKT---CVKLGLVRVDESFDYIL 1059

Query: 1133 SMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
               I   T    + L AD  K   ++++L++ TP  +W+ +LD  D    E ++
Sbjct: 1060 KKPITFFTRTSTEKLQADIAKTQAQIEELKRTTPVKMWLTELDKFDKTFQEYER 1113


>gi|444721790|gb|ELW62503.1| DNA topoisomerase 2-beta [Tupaia chinensis]
          Length = 1652

 Score =  601 bits (1549), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 300/519 (57%), Positives = 382/519 (73%), Gaps = 17/519 (3%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 79  SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 137

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 138 ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 197

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 198 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 256

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
           K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 257 KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 315

Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 316 GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 375

Query: 318 VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
           VDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 376 VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 435

Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
            SFGSKC+LSE+F  K  +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 436 KSFGSKCQLSEKFF-KAASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 494

Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
           N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++ N
Sbjct: 495 NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 554

Query: 496 SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQV 531
           +EI NI KI+GL+    Y++   +K+LRYG +MIMTDQ 
Sbjct: 555 AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQA 593



 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 294/621 (47%), Positives = 407/621 (65%), Gaps = 25/621 (4%)

Query: 591  ITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNI 650
            I  +    +KN + LSFYS+P+++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++
Sbjct: 586  IMIMTDQASKNKQELSFYSIPEFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADM 644

Query: 651  TLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEK 698
              H+  F +   +D  AI LAFSKKKI+ RK+WL  F            P   L     K
Sbjct: 645  ERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATK 704

Query: 699  YIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYV 758
            ++ Y+DF+NKELILFS +D +RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V
Sbjct: 705  HLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSV 764

Query: 759  SEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLS 818
            +E SAYHHGEQ+L  TI+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS
Sbjct: 765  AEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLS 824

Query: 819  PITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRD 878
             + R LFP  DD LL +L +D Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+
Sbjct: 825  SLARLLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDARE 884

Query: 879  IVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELP 938
            IV NVRR+L+G    PM P Y+ F GTI++    +    Y V+G I  V+  T+ I ELP
Sbjct: 885  IVNNVRRMLDGLDPHPMLPNYKNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELP 940

Query: 939  IRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLK 994
            +R WTQ Y+E  LE ++   D+  + I  +++Y  DTTV F V ++EE + + +  GL K
Sbjct: 941  VRTWTQVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHK 1000

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             FKL TT++ ++M LFD  G +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  K
Sbjct: 1001 VFKLQTTLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTK 1060

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESE 1114
            L N+ RFIL  + G+I + NR + DL+  L Q+G+   P  +       A   +ET+   
Sbjct: 1061 LNNQARFILEKIQGKITIENRSKKDLIQMLVQRGYESDPVKAWKEAQEKASEEEETQNQH 1120

Query: 1115 ENPEVVNGVQS-IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKD 1173
            ++    +G  S  D++Y+L+M++ +LT EKV+ L+  RD    EV+DL++ +P  LW +D
Sbjct: 1121 DDSSSDSGTPSGPDFNYILNMSLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKED 1180

Query: 1174 LDALDMQLDELDKSDARAEEE 1194
            L A    ++ELDK +A+  E+
Sbjct: 1181 LAAF---VEELDKVEAQERED 1198


>gi|308159431|gb|EFO61962.1| DNA topoisomerase II [Giardia lamblia P15]
          Length = 1492

 Score =  600 bits (1548), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 380/1084 (35%), Positives = 582/1084 (53%), Gaps = 179/1084 (16%)

Query: 255  VELNGHRVPVKSFAEYVDM---YPKSVTRFHERVNERWEICVTLSE-GQFQQVSFVNGIA 310
            VE N   +PV   ++  D    Y K +      VN+ W+I +  ++ G+  QVSFVN I 
Sbjct: 305  VETNSLLIPVDELSKPSDWTLDYLKVIP-----VNKFWDIGLGYTDSGELVQVSFVNSIN 359

Query: 311  TIKGGTHVDYVANQVANHVMAVVNKK----NKNAN-VKAHNVKNHLWVFVNALIDNPAFD 365
            T  GGTHVD + + V + +  ++ K      KNA  +    +K+ L +F+ +L+ NP+FD
Sbjct: 360  TTDGGTHVDAILDLVMSQLNDILIKSFQQDAKNAKKLTRQQLKSCLVLFIRSLVVNPSFD 419

Query: 366  SQTKETLTLRQS----SFGSK----CELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK 417
            SQTK +L   ++    S GS       L+ + +K++     + ++L   +  + +K L K
Sbjct: 420  SQTKISLKTDKAALLRSLGSTQAELAALATQLVKRIQEIRPLWDSLRQASYNQAAKLLTK 479

Query: 418  NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV--GRDRFGVF 475
             DG+KT  + GI KL+DA  AG R S +CTLILTEGDSAKALA+ G+S +  G+  +GVF
Sbjct: 480  TDGSKTSQLLGIPKLDDAIAAGTRESSKCTLILTEGDSAKALAVDGISSIEDGKKYYGVF 539

Query: 476  PLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNV---KSLRYGHLMIMTDQVL 532
            PLRGK++NVR  S ++V NN+EI N+KKILGLKQG++Y+      +LRYGH+MIMTDQ  
Sbjct: 540  PLRGKVINVRNESIDKVSNNAEITNLKKILGLKQGMDYSTQDARNTLRYGHVMIMTDQ-- 597

Query: 533  LAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 592
                                      D DGSHIKGLLIN   ++W  L +   FL  FIT
Sbjct: 598  --------------------------DPDGSHIKGLLINLFDTYWNGLARSNKFLDFFIT 631

Query: 593  PIVKATN-KNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 651
            PIV+ T  +N K  +FY++P+Y+ W +++  +   W+I YYKGLG+S + + K+YFQ I 
Sbjct: 632  PIVRCTQARNMK--TFYTIPEYKKWTQTVT-DLPKWNINYYKGLGSSNTTDAKQYFQQIA 688

Query: 652  LHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELI 711
             ++K  ++ + +    ++LAF KK  + RK W+   +P  +LD     I  + FV+KEL+
Sbjct: 689  NNRKTLIY-NPESASKLKLAFDKKLADDRKTWISGTDPDTYLDLSPTKIDITAFVDKELV 747

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            L+ +   QR+IPS++DGLKPGQRK+L+  FKRN   + KV+Q SG+VS+ +AYHHGE SL
Sbjct: 748  LYDIESNQRAIPSLMDGLKPGQRKVLYACFKRNLKTKLKVSQLSGFVSDKAAYHHGEASL 807

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
              TI+ MAQ F GSNNI LL P G FG+R +GGKD+++ RYI T L P+ R+LFP+ DD 
Sbjct: 808  NGTIVNMAQSFTGSNNIALLYPAGIFGSRARGGKDSSAPRYISTYLDPLARYLFPEPDDA 867

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            ++ Y  +DG+ IEP +Y PI+P VL+NGS+GIGTG+S+ IP ++P D++ ++R  + G+ 
Sbjct: 868  IMQYKEDDGKVIEPFYYAPILPMVLINGSDGIGTGFSTTIPQFDPLDMLHSIRLRIYGKT 927

Query: 892  M----EPMHPWYRGFGGTIEKTASKEAG-VTYTVTGIIEEVNETTLRIKELPIRRWTQDY 946
                 + + P+  G+ GT+     K    V + +TG    V+  T++I +LPI  WT+ Y
Sbjct: 928  TRNEKKTLKPFSNGWKGTMTHEYDKNGKFVRWRMTGCFSVVDLKTIQITDLPIGVWTESY 987

Query: 947  REFLESIIDQND--------------------------------------------SFIR 962
            RE +E+ I  N+                                             + +
Sbjct: 988  REEIETWIKGNEDAGTAKKPATKASATTKGKAKLKGAPSTTKEKPAGKDQLYDSVTGYYK 1047

Query: 963  GFR-------QYSDDTTVDFEVFLSEESMMR-----------------TKQEGLLKKFKL 998
            G           SD+ TV+  V LS+E                      + + ++K FKL
Sbjct: 1048 GIHPALMKVIDMSDNNTVNIIVTLSDECARHLIGTSDADIKTCNTAGTARYDNIVKGFKL 1107

Query: 999  TTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENK 1058
              +I  SNM L++ K ++  Y TP +I++ F+  RL+ Y  R+  Q+ +++   L L  K
Sbjct: 1108 DGSIRPSNMWLYNEKNMLCLYHTPFKIIDAFYAKRLDLYRVRRNNQITDMDDRSLLLNEK 1167

Query: 1059 VRFILGVVNGEIVVNNRKR---TDLLLELRQKGFTPFPKNSKSI----------EAVVAG 1105
             RFI  ++  ++ + N  R   T+LL E  Q  F P  K+   +          +A+   
Sbjct: 1168 ARFIKLIIEDKLNIKNVSRDSVTELLWEKYQ--FHPSRKHRIILLSHRNLINKRQALRID 1225

Query: 1106 ATDETEESEEN-------------------PEVVNGVQSID----------YDYLLSMAI 1136
               E  E ++N                   P+  + + S            Y+YLL M I
Sbjct: 1226 EDSERPEEDDNADQRDLEKHLEATVKDLVGPQFFDAINSWSGFTVQDRNECYEYLLRMPI 1285

Query: 1137 GTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD--MQLDELDKSDARAEEE 1194
             T+T E  + LL+  + +  E + LR  T E++W++DL A +   ++D   +    AE  
Sbjct: 1286 STMTKESYRNLLSSAELIKAEAEKLRNTTVENMWLRDLAAFEAAYEVDRHMEQTKSAETR 1345

Query: 1195 RMKI 1198
            R+ +
Sbjct: 1346 RLTV 1349



 Score =  197 bits (501), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/264 (42%), Positives = 159/264 (60%), Gaps = 16/264 (6%)

Query: 32  QKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAA 91
           Q+ +  EH+LLRPD Y+GS+      LW+YE   + + +   + VPGL KIFDEI+VNA+
Sbjct: 8   QRVTGSEHVLLRPDMYVGSVSAAETFLWLYEP-GQGLYYTKANIVPGLCKIFDEIIVNAS 66

Query: 92  DNKQRDP------KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           DNKQRD       KM  +K  +D     ISV N G    +   ++E +Y+P L FG L+T
Sbjct: 67  DNKQRDSDRSAGHKMSYIKCNVDVVSGAISVENDGVEGLLHFDEKEKMYLPTLAFGILMT 126

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD  ++ TGGRNGYGAKLTNIFST+F +   +  ++  ++Q +T+NM     P I 
Sbjct: 127 SSNYDDTEQRVTGGRNGYGAKLTNIFSTKFTVLLQENGQV--FEQTWTDNMKNTKPPRIE 184

Query: 206 KCKE-GDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
             K+   N+ + SF PD  KF MT  L+ D  A M +R VD+AGC    +K+ +NG  + 
Sbjct: 185 DVKDKKKNFIRFSFTPDYMKFGMTSGLDRDHAAYMMRRAVDVAGC-NVGLKLIINGTELK 243

Query: 264 VKSFAEYVDMYPKS----VTRFHE 283
           + +F +Y  M  +S    +T+F+E
Sbjct: 244 IANFEQYARMVYRSINPEITQFYE 267


>gi|428171891|gb|EKX40804.1| hypothetical protein GUITHDRAFT_113071 [Guillardia theta CCMP2712]
          Length = 1372

 Score =  599 bits (1545), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 334/762 (43%), Positives = 472/762 (61%), Gaps = 73/762 (9%)

Query: 28  EEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEIL 87
           +  YQKK+QLEH+LLRPD Y+GS+E+ T+ + +Y+ +S ++  R+ISY+PGL KIFDEIL
Sbjct: 269 QSQYQKKTQLEHVLLRPDVYVGSMEQVTKQMLVYDVKSSSVRLRSISYIPGLLKIFDEIL 328

Query: 88  VNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQE-EGVYVPELIFGHLLTS 146
           VNAADNKQRD     +KV  D+++  + V+N G G+PV  H + + VY+PEL+ G+LL  
Sbjct: 329 VNAADNKQRDVATKQIKVKFDKKNATVQVYNDGKGIPVCRHAKYDDVYIPELVMGNLLAG 388

Query: 147 SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
           SN+DD   +  GGR+GYGAKLTNIFS+ F IET D  R   Y+Q + NNM     P I K
Sbjct: 389 SNFDDTKTRLAGGRHGYGAKLTNIFSSVFTIETVDSSRALLYRQTWRNNMTTCEPPTIEK 448

Query: 207 CK-EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
              + +++TKV+F  DL +F    L+DD +AL  +RVVD+AGC    +K  +NG  V V+
Sbjct: 449 LTGKAEDYTKVTFTIDLKRFGKKSLDDDTIALWARRVVDVAGC-NNGLKCWINGTLVKVR 507

Query: 266 SFAEYVDMYPKSVTR-----------FHERVNERWEICVTLSEGQFQ---QVSFVNGIAT 311
           SF + + +Y  ++T+             E  + RW++ V  +         +SFVN + T
Sbjct: 508 SFQDLMLLYRSALTQEKGAEGAKAVEVIEDNSGRWKVAVGSAVNNSSSELSMSFVNSVWT 567

Query: 312 IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
            +GGTH+ +V +    +V  V+N K K+ +V    ++N++W+ V ALI+NP+FD+Q KE 
Sbjct: 568 SRGGTHLKHVQDLFIKYVATVLNNKYKDLDVNERTIRNNMWIGVAALIENPSFDTQGKEL 627

Query: 372 LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKND---GTKTEDVRG 428
           L      FGS+ ++S + +++V  K+ IVE ++     K  KDL K+    G  ++    
Sbjct: 628 LVTPTEKFGSEFKVSRKKMEEVVQKTEIVERIV--LEGKLVKDLDKSSKTMGAWSQKRLL 685

Query: 429 ISKLEDANLAGGRNSEQCTLILTEGDSAKALAM-AGLSVVGRDRFGVFPLRGKLLNVREA 487
           + KLEDAN AG   S +CTLILTEGDSAK + M +GLSV+GRDR+GVFPL+GKL+NVREA
Sbjct: 686 LPKLEDANWAGTAKSRECTLILTEGDSAKVVDMVSGLSVLGRDRYGVFPLKGKLINVREA 745

Query: 488 SSNQVLNNSEIGNIKKILGLKQGVEYNNVKS------LRYGHLMIMTDQVLLAPLSFLLW 541
           ++ QV NN+E+  IK ILGL+    Y+  K       LRYG +M+MTD            
Sbjct: 746 TNLQVKNNTELAAIKAILGLQNSATYDLDKKESSAFPLRYGKVMLMTD------------ 793

Query: 542 FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA---- 597
                           QDHDGSHIKGL IN IH++WP LL+   FL EF+TPIVK     
Sbjct: 794 ----------------QDHDGSHIKGLFINMIHAYWPELLRSNQFLFEFVTPIVKVYTGS 837

Query: 598 -----TNKNGKVLSFYSMPDYEAWKESL-GGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 651
                TNK  K  +F++  +++ W +SL   + + + IKYYKGLGT+T++EGKEYF N+ 
Sbjct: 838 QDLRKTNKAYK--TFFTQIEFKQWWDSLQDKDRNKFHIKYYKGLGTNTAQEGKEYFSNLE 895

Query: 652 LHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPG---NHLDQKEKYIKYSDFVNK 708
            H+  FV++  QD  +I LAFSK   E RKKW+         + +D  +  + ++DFV K
Sbjct: 896 SHRLSFVYDGKQDDNSITLAFSKDADE-RKKWIQDHADSVVKDFIDHSKDKLSFTDFVYK 954

Query: 709 ELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAK 750
           EL+ +S A LQR+IPS++DG KP QRKIL+  FKR   KE K
Sbjct: 955 ELVQYSYASLQRAIPSLIDGCKPSQRKILYACFKRKLNKEIK 996



 Score =  197 bits (502), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/382 (32%), Positives = 202/382 (52%), Gaps = 49/382 (12%)

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL-----NGEM 891
            +EDG +IEP +Y+PIIP  LVNG++GIGTGWS+ IP+YNP +I+  +R ++      G  
Sbjct: 997  SEDGLEIEPRYYIPIIPMTLVNGAQGIGTGWSTSIPSYNPFEIITILRSMIRESKGGGGG 1056

Query: 892  MEPMH------PWYRGFGGTIEKTASKEAGVTYTVTGI--IEEVNETTLRIKELPIRRWT 943
             E +       PWY GF GTI+K    + G  +T +G   +E+ N   +R+ ELPI  WT
Sbjct: 1057 QESLRKSRELVPWYAGFKGTIQK---HKDGERFTCSGCFEVEDTNPLRIRVTELPIGMWT 1113

Query: 944  QDYREFLESIIDQND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEG------LLK 994
            +D+++ L  + D+ +   + I  +   + +  +D  +  +E++  +  + G      L+K
Sbjct: 1114 EDFQDHLNRLSDKTEDRAAMISSYTTNNSEAVIDTTITFTEDAEKKLMESGKLNKQELMK 1173

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
              KL   IS  NM LF + G IK+Y  P  IL ++F  R+  YE+RK++Q   L  + ++
Sbjct: 1174 VLKLINPISLGNMVLFAADGKIKQYYNPLDILADYFPERMRLYERRKQMQEARLAAQAMR 1233

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGF---------------TPFPKNSKSI 1099
              N+ RF+  V +GE     + + +L  EL++KGF                  PK+  + 
Sbjct: 1234 FTNQYRFLGAVASGEFKFEGKSKDELEKELKEKGFNTQEEIEKVFTEKKHVAAPKSEGAS 1293

Query: 1100 EAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVD 1159
               VA   +E E  E N    NG     + YLL M + + T E+ + L    D++  E+ 
Sbjct: 1294 LEYVAEEEEEEELKESN----NG-----FAYLLQMPMWSATRERREKLKKQVDQVEGELK 1344

Query: 1160 DLRKATPESLWVKDLDALDMQL 1181
             L+  +PE +W+ +LDAL+ +L
Sbjct: 1345 RLKGISPEDIWLAELDALETKL 1366


>gi|18266788|sp|O61078.2|TOP2_LEICH RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|6453822|gb|AAC05295.2| DNA topoisomerase II [Leishmania chagasi]
          Length = 1236

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 393/1199 (32%), Positives = 629/1199 (52%), Gaps = 125/1199 (10%)

Query: 26   TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
            T    Y+K + ++H+LLRP+ Y+GSIE     ++I++ E   M+  T+    GL KI DE
Sbjct: 2    TYASKYKKLTPIDHVLLRPEMYVGSIETQPTPMYIFDPEKGRMVWETMRVNQGLLKIVDE 61

Query: 86   ILVNAADN---KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
            IL+NAADN    +   +   + + I    + I+V N G G+P+   +E  +Y+PE++FGH
Sbjct: 62   ILLNAADNINNSKGSVRQTYISIHISDTGE-ITVENDGAGLPIVRSREHKMYIPEMVFGH 120

Query: 143  LLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEF-IIETADGKRLKKYKQVFTNNMGKKSE 201
            LLTSSNY+++   TT GR+GYGAKLTNI ST+F ++   DG+   +    +T++M   + 
Sbjct: 121  LLTSSNYNNDSTSTTAGRHGYGAKLTNILSTKFSVVCRTDGR---ESHMSWTDHMRMATA 177

Query: 202  PNISKCKEGD-NWTKVSFKPDLAKFNMTH--LEDDVVALMKKRVVDLAGCLGKSVKVELN 258
            P +++    + + T+V F PD A F   +  +  D+  ++ KR++DLA    K ++V LN
Sbjct: 178  PRVNRVDPKEKSVTRVKFMPDYAHFGFPNASISLDMKRVLHKRIMDLAAMFSK-IEVRLN 236

Query: 259  GHRVPVKSFAEYVDMY----------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNG 308
                  ++F +Y  +Y          P+     +   N        L++   + V  VNG
Sbjct: 237  NVPFGFRTFTDYARLYSLPGLDGSMPPEPFV--YTSPNGSVAYVPQLTQSPKRIVGVVNG 294

Query: 309  IATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHN-VKNHLWVFVNALIDNPAFDSQ 367
            + T  GGTH +   + + + + ++     KN  V   N V+ H  V V  +   P FDSQ
Sbjct: 295  VVTYNGGTHCNAAMDILDSCLDSLSKNFKKNGKVVDTNRVQRHFTVLVFLIQTQPKFDSQ 354

Query: 368  TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TK 422
            +K  L     S  +   + +  L+K   +   +E  ++  + + + +L K  G     + 
Sbjct: 355  SKARLV----STVTMPRMPKNTLEKYLERMPFLEAHVNSMDDQLANELNKEIGAGRRLSS 410

Query: 423  TEDVRGISKLEDANLA--GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGK 480
               +  I+KL DA  +   GRN    TLI+TEGDSAKALA+  LS   +   GVFPLRGK
Sbjct: 411  KTLISAITKLVDATSSQPDGRNIR--TLIITEGDSAKALALNSLSSEQKKYCGVFPLRGK 468

Query: 481  LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLL 540
            LLNVR  +  ++     + ++   LGL+ G EY +   LRY  L++MTDQ          
Sbjct: 469  LLNVRNKNLKRLKTCKGLQDLFLSLGLELGKEYRSPAELRYQRLLVMTDQ---------- 518

Query: 541  WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVK--A 597
                              D DGSHIKGL+IN   S WP LL+  P ++  F TPIVK   
Sbjct: 519  ------------------DADGSHIKGLVINAFESLWPKLLQNNPGYISLFSTPIVKIKV 560

Query: 598  TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDF 657
            + K+ +V++F+S  D+  W+ +    ++ ++ KYYKGLGTST+ EGKEYF ++  +    
Sbjct: 561  SGKSKEVIAFHSFRDFHRWQRA--HPSARYTAKYYKGLGTSTTAEGKEYFADMEKNIMQL 618

Query: 658  VWEDDQDGEAIELAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFS 714
               D +D + ++  F   ++E RK+W+ +   F+    +D+ +K +   +FV+KE++ F+
Sbjct: 619  T-VDARDHQLLDSVFDAAEVEWRKEWMTKANAFQGEVDIDRSKKTLTIPEFVHKEMVHFA 677

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
            +    R+IP  VDGLKP QRKIL+   +R+  + +KVAQ SGY+SE SA+HHGE SL  T
Sbjct: 678  LVGNARAIPHCVDGLKPSQRKILWAMLRRHNSEASKVAQLSGYISEASAFHHGEASLQET 737

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ MAQ+F G NNINLL P GQFG+R Q G D A+ RYIFT+LS   R LFP++DD LLD
Sbjct: 738  IVKMAQNFTGGNNINLLVPEGQFGSRQQLGNDHAAPRYIFTKLSRFGRLLFPEEDDPLLD 797

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE---- 890
            Y++E+G  +EP  Y+PI+P +L NG+ GIG G+++ IP+++P D+ A VR ++NGE    
Sbjct: 798  YMDEEGTFVEPHHYVPILPMLLCNGAVGIGFGFATTIPSFHPLDVSAAVRAMINGESAKQ 857

Query: 891  MMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFL 950
            ++  + PW  GF GT+ +    E    +   G           I E+P     + +R  +
Sbjct: 858  VVRNLVPWAVGFQGTVRRGPDNE----FIAVGKYTAHPNGRFHISEIPWMTSIEAFRLHI 913

Query: 951  ESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
             S+   +   ++    YS    +D ++ + + S+  T          L   I   N  +F
Sbjct: 914  SSLASAD--VVQRIADYSGANHIDIDLIVRDGSL--TTWAECETDLALAQRIYI-NGTVF 968

Query: 1011 DSKGVIKKYDTP-EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGE 1069
               G +   D+    +L+  +  RL+ Y++R+  ++  ++++L +L++  +F+     G+
Sbjct: 969  SPTGTLSPIDSDLSPVLQWHYDRRLDLYKRRRTRKIGLMKMDLARLQSTRKFVEHFRQGQ 1028

Query: 1070 IVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID-- 1127
            I        D L                        ATD+T        V  G+  +D  
Sbjct: 1029 I--------DFL-----------------------NATDDTLHKT---CVKLGLVRVDES 1054

Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
            +DY+L   I   T    + L AD  K   ++++L++ TP  +W+ +LD  D    E ++
Sbjct: 1055 FDYILKKPITFFTRTSTEKLQADIAKTQAQIEELKRTTPVKMWLTELDKFDKTFQEYER 1113


>gi|159117354|ref|XP_001708897.1| DNA topoisomerase II [Giardia lamblia ATCC 50803]
 gi|30692178|gb|AAP33503.1| topoisomerase II [Giardia intestinalis]
 gi|157437011|gb|EDO81223.1| DNA topoisomerase II [Giardia lamblia ATCC 50803]
          Length = 1491

 Score =  596 bits (1536), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 396/1188 (33%), Positives = 617/1188 (51%), Gaps = 186/1188 (15%)

Query: 285  VNERWEICVTLSE-GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK----NKN 339
            VN+ W+I +  ++ G+  QVSFVN I T  GGTHVD + + + + +  V+ K      KN
Sbjct: 332  VNKFWDIGLGYTDSGELVQVSFVNSINTTDGGTHVDAILDLIMSQLNDVLIKSFQQDAKN 391

Query: 340  AN-VKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQS----SFGSK----CELSEEFL 390
            A  +    +K+ L +F+ +L+ NP+FDSQTK +L   ++    S GS       L+ + +
Sbjct: 392  AKKLTRQQLKSCLVLFIRSLVVNPSFDSQTKISLKTDKAALLRSLGSTQAELATLATQLV 451

Query: 391  KKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLIL 450
            K++     +  +L   +  + +K L K DG+KT  + GI KL+DA  AG R S +CTLIL
Sbjct: 452  KRIQEIRPLWNSLRQASYNQAAKLLTKTDGSKTSQLLGIPKLDDAIAAGTRESSKCTLIL 511

Query: 451  TEGDSAKALAMAGLSVV--GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK 508
            TEGDSAKALA+ G+S +  G+  +GVFPLRGK++NVR  S ++V NN+EI N+KKILGLK
Sbjct: 512  TEGDSAKALAVDGISSIEDGKKYYGVFPLRGKVINVRNESIDKVSNNAEITNLKKILGLK 571

Query: 509  QGVEYNNVK---SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
            QG++Y+  +   +LRYGH+MIMTDQ                            D DGSHI
Sbjct: 572  QGMDYSTQEARNTLRYGHVMIMTDQ----------------------------DPDGSHI 603

Query: 566  KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATN-KNGKVLSFYSMPDYEAWKESLGGNA 624
            KGLLIN   ++W  L +   FL  FITPIV+ T  +N K  +FY++P+Y+ W +++  + 
Sbjct: 604  KGLLINLFDTYWNGLARSNKFLDFFITPIVRCTQARNMK--TFYTIPEYKKWTQTVT-DL 660

Query: 625  SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
              W+I YYKGLG+S + + K+YFQ I  ++K  ++ + +    ++LAF KK  + RK W+
Sbjct: 661  PKWNINYYKGLGSSNTTDAKQYFQQIANNRKTLIY-NPESASKLKLAFDKKLADDRKTWI 719

Query: 685  LQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRN 744
               +P  +LD     I  + FV+KEL+L+ +   QR+IPS++DGLKPGQRK+L+  FKRN
Sbjct: 720  SGTDPDTYLDLSPTKIDITAFVDKELVLYDIESNQRAIPSLMDGLKPGQRKVLYACFKRN 779

Query: 745  FIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGG 804
               + KV+Q SG+VS+ +AYHHGE SL  TI+ MAQ F GSNNI LL P G FG+R +GG
Sbjct: 780  LKTKLKVSQLSGFVSDKAAYHHGEASLNGTIVNMAQSFTGSNNIALLYPAGIFGSRARGG 839

Query: 805  KDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIG 864
            KD+++ RYI T L P+ R+LFP+ DD ++ Y  +DG+ IEP +Y PI+P VL+NGS+GIG
Sbjct: 840  KDSSAPRYISTYLDPLARYLFPEPDDAIMQYKEDDGKVIEPFYYAPILPMVLINGSDGIG 899

Query: 865  TGWSSYIPNYNPRDIVANVRRLLNGEMM----EPMHPWYRGFGGTIEKTASKEAG-VTYT 919
            TG+S+ IP ++P D++ ++R  + G+        + P+  G+ GT+     K    V + 
Sbjct: 900  TGFSTTIPQFDPLDMLHSIRLRIYGKTTRREKRTLKPFSNGWKGTMTHEYDKSGKFVRWR 959

Query: 920  VTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND--------------------- 958
            +TG    V+  T++I +LPI  WT+ YRE +E+ +  N+                     
Sbjct: 960  MTGCFSVVDLKTIQITDLPIGVWTESYREEIETWVKGNEDAGTAKKPATKVSATTKGKAK 1019

Query: 959  -----------------------SFIRGFR-------QYSDDTTVDFEVFLSEESMM--- 985
                                    + +G           SD+ TV+  V LS+E      
Sbjct: 1020 LKGASGAAKEKPAAKDQLYDSVTGYYKGIHPALMKVIDMSDNNTVNIIVTLSDECARYLI 1079

Query: 986  --------------RTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFH 1031
                            + + ++K FKL  +I  SNM L++ + ++  Y TP +I++ F+ 
Sbjct: 1080 GTSDVDIETCNTAGTARYDNIVKGFKLDGSIRPSNMWLYNERNMLCLYHTPFKIIDAFYA 1139

Query: 1032 IRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTP 1091
             RL+ Y  R+  Q+ +++   L L  K RFI  ++  ++ + N  R D + EL    +  
Sbjct: 1140 KRLDLYRVRRNNQIIDMDDRSLMLNEKARFIKLIIEDKLNIKNVPR-DSVTELLWGKYQF 1198

Query: 1092 FPKNSKSIEAVV---------AGATDETEESEE----------------------NPEVV 1120
             P     I  +          A   DE  E  E                       P+  
Sbjct: 1199 HPSRKHRIILLSHRNLINKRQALKIDEDSERPEEDDDADQRDLEKHLEATVKDLIGPQFF 1258

Query: 1121 NGVQSID----------YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLW 1170
            + + S            Y+YLL M I T+T E  + LL+  + +  E + LR  T E++W
Sbjct: 1259 DAINSWSGFTVQDRNECYEYLLRMPISTMTKESYRNLLSSAELIRAEAEKLRNTTVENMW 1318

Query: 1171 VKDLDALD--MQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNN 1228
            ++DL A +   ++D   +    AE  R+ +           ++  +  ++ RK   K+ +
Sbjct: 1319 LRDLAAFEAAYEVDRHMEQTKSAETRRLTVT--------ETMIQGKLEESERK--YKAMD 1368

Query: 1229 ARATEAMGEMDNVTKVVKPKGRAGLK-KAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTK 1287
             R    +G+ DN  +    +   GLK K   +   +      P  K ++ K  E L +  
Sbjct: 1369 DR----VGDSDNEIEYSTTRDDQGLKIKGEPKPKKEHVPKTAPASKAKVQKPEEGLETAP 1424

Query: 1288 LEPSPDQSGV--METEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDE 1333
             EP   +     ++T+K      KKE S  T ++     +++S  ED+
Sbjct: 1425 TEPKRKRPAAAPVDTKKASAKRGKKEESSFTESETSATELDSSVLEDD 1472



 Score =  197 bits (500), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/264 (41%), Positives = 159/264 (60%), Gaps = 16/264 (6%)

Query: 32  QKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAA 91
           Q+ +  EH+LLRPD Y+GS+      LW+YE   + + +   + VPGL KIFDEI+VNA+
Sbjct: 8   QRVTGSEHVLLRPDMYVGSVSAAETFLWLYEP-GQGLYYTKANIVPGLCKIFDEIIVNAS 66

Query: 92  DNKQRDP------KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           DNKQRD       KM  +K  +D     ISV N G    +   ++E +Y+P L FG L+T
Sbjct: 67  DNKQRDSDRSAEHKMTYIKCSVDVASGAISVENDGVEGLLHFDEKEKMYLPTLAFGILMT 126

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD  ++ TGGRNGYGAKLTNIFST+F +   +  ++  ++Q +T+NM     P I 
Sbjct: 127 SSNYDDTEQRVTGGRNGYGAKLTNIFSTKFTVLLQENGQV--FEQTWTDNMKNTKPPRIE 184

Query: 206 KCKE-GDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
             ++   N+ + SF PD  KF MT  L+ D  A M +R VD+AGC    +K+ +NG  + 
Sbjct: 185 DVRDKKKNFIRFSFTPDYMKFGMTSGLDRDHAAYMMRRAVDVAGC-NIGLKLIINGTELK 243

Query: 264 VKSFAEYVDMYPKS----VTRFHE 283
           + +F +Y  M  +S    +T+F+E
Sbjct: 244 IANFEQYARMVYRSINPEITQFYE 267


>gi|253742615|gb|EES99414.1| DNA topoisomerase II [Giardia intestinalis ATCC 50581]
          Length = 1492

 Score =  592 bits (1527), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 374/1083 (34%), Positives = 577/1083 (53%), Gaps = 177/1083 (16%)

Query: 255  VELNGHRVPVKSFA---EYVDMYPKSVTRFHERVNERWEICVTLSE-GQFQQVSFVNGIA 310
            VE N   VP+   +   ++   Y K ++     VN+ W+I +  ++ G+  QVSFVN I 
Sbjct: 305  VETNSLLVPIDELSKPSDWTSDYLKVIS-----VNKFWDIGLGYTDSGELVQVSFVNSIN 359

Query: 311  TIKGGTHVDYVANQVANHVMAVVNKK----NKNAN-VKAHNVKNHLWVFVNALIDNPAFD 365
            T  GGTHVD + + + + +  ++ K      KNA  +    +K+ L +F+ +L+ NP+FD
Sbjct: 360  TTDGGTHVDAILDLIMSQLNDILIKSFQQDAKNAKKLTRQQLKSCLVLFIRSLVVNPSFD 419

Query: 366  SQTKETLTLRQS----SFGSK----CELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK 417
            SQTK +L   ++    S GS       L+ + +K++     +   L   +  + +K L K
Sbjct: 420  SQTKISLKTDKAALLRSLGSTQAELTNLATQLVKRIQDVRPLWNALRQASYNQAAKLLTK 479

Query: 418  NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV--GRDRFGVF 475
             DG+KT  + GI KL+DA  AG R S +CTLILTEGDSAKALA+ G+S +  G+  +GVF
Sbjct: 480  TDGSKTSQLLGIPKLDDAIAAGTRESSKCTLILTEGDSAKALAVDGISSIEDGKKYYGVF 539

Query: 476  PLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVK---SLRYGHLMIMTDQVL 532
            PLRGK++NVR  S ++V NN+EI N+KKILGLKQG++Y+  +   +LRYGH+MIMTDQ  
Sbjct: 540  PLRGKVINVRNESIDKVSNNAEITNLKKILGLKQGMDYSTQEARNTLRYGHVMIMTDQ-- 597

Query: 533  LAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 592
                                      D DGSHIKGLLIN   ++W  L +   FL  FIT
Sbjct: 598  --------------------------DPDGSHIKGLLINLFDTYWNGLARSNKFLDFFIT 631

Query: 593  PIVKATN-KNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 651
            PIV+ T  +N K  +FY++P+Y+ W +++  +   W+I YYKGLG+S + + K+YFQ I 
Sbjct: 632  PIVRCTQARNMK--TFYTIPEYKKWTQTVT-DLPKWNINYYKGLGSSNTTDAKQYFQQIA 688

Query: 652  LHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELI 711
             ++K  ++ + +    ++LAF KK  + RK W+   +P  +LD     I  + FV+KEL+
Sbjct: 689  NNRKTLIY-NPESASKLKLAFDKKLADDRKTWISGTDPDTYLDLSPTKIDITAFVDKELV 747

Query: 712  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            L+ +   QR+IPS++DGLKPGQRK+L+  FKRN   + KV+Q SGYVS+ +AYHHGE SL
Sbjct: 748  LYDIESNQRAIPSLMDGLKPGQRKVLYACFKRNLKSKLKVSQLSGYVSDKAAYHHGEASL 807

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
              TI+ MAQ F GSNNI LL P G FG+R +GGKD+++ RYI T L P+ R+LFP+ DD 
Sbjct: 808  NGTIVNMAQSFTGSNNIALLYPAGIFGSRARGGKDSSAPRYISTYLDPLARYLFPEPDDA 867

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            ++ Y  +DG+ IEP +Y PI+P VL+NGS+GIGTG+S+ IP ++P D++ ++R  + G+ 
Sbjct: 868  IMQYKEDDGKVIEPFYYAPILPMVLINGSDGIGTGFSTTIPQFDPLDMLHSIRLRIYGKT 927

Query: 892  M----EPMHPWYRGFGGTIEKTASKEAG-VTYTVTGIIEEVNETTLRIKELPIRRWTQDY 946
                   + P+  G+ GT+     K    V + +TG    V+  T++I +LPI  WT+ Y
Sbjct: 928  TRNEKRNLKPFSNGWKGTMTHEYDKSGKFVRWRMTGCFSVVDLKTIQITDLPIGVWTESY 987

Query: 947  REFLESIIDQND--------------------------------------------SFIR 962
            RE +E+ I  N+                                             + +
Sbjct: 988  REEIETWIKGNEEAGAVKKPAAKVASTAKGKPKLKGAPSAAKEKATTKDQLYDSVTGYYK 1047

Query: 963  GFR-------QYSDDTTVDFEVFLSEE-----------------SMMRTKQEGLLKKFKL 998
            G           SD+ TV+  V LS+E                 ++   + + ++K FKL
Sbjct: 1048 GIHPALMKVIDMSDNNTVNIIVTLSDECARYLIGTSDADIKSCNTVGTARYDNIVKGFKL 1107

Query: 999  TTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENK 1058
              +I  SNM L++ + ++  Y TP +I++ F+  RL  Y  R+  QL +++ + L L  K
Sbjct: 1108 DGSIRPSNMWLYNERNMLCLYHTPFKIIDAFYTKRLALYGVRRNNQLIDMDDKSLMLNEK 1167

Query: 1059 VRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSI----------EAVVAGATD 1108
             RFI  ++  ++ + N  R D + E+    +   P     I          +       D
Sbjct: 1168 ARFIKLIIEDKLNIKNVPR-DSVTEILWNKYQFHPSRKHRIILLSHRNLINKKQTLRVDD 1226

Query: 1109 ETEESEE---------------------NPEVVNGVQSID----------YDYLLSMAIG 1137
            ++E  EE                       +  N + S +          Y+YLL M I 
Sbjct: 1227 DSERPEEEDDADQRDLEKHLEATVKDLVGAQFFNAINSWNGFTVQDRNECYEYLLRMPIS 1286

Query: 1138 TLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD--MQLDELDKSDARAEEER 1195
            T+T E  + L +  + +  E + LR  T E++W++DL A +   ++D   +    AE  R
Sbjct: 1287 TMTKESYKNLQSSAELIKAEAEKLRNTTVENIWLRDLAAFEAAYEVDRHMEQTKSAETRR 1346

Query: 1196 MKI 1198
            + +
Sbjct: 1347 LTV 1349



 Score =  199 bits (505), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/264 (42%), Positives = 159/264 (60%), Gaps = 16/264 (6%)

Query: 32  QKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAA 91
           Q+ +  EH+LLRPD Y+GS+      LW+Y  + + + +   + VPGL KIFDEI+VNA+
Sbjct: 8   QRVTGSEHVLLRPDMYVGSVSSAETFLWLYNPD-QGLYYTKANIVPGLCKIFDEIIVNAS 66

Query: 92  DNKQRDP------KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           DNKQRD       KM  +K  +D     ISV N G    +   ++E +Y+P L FG L+T
Sbjct: 67  DNKQRDSDRSAGHKMSYIKCDVDVVSGAISVENDGVEGLLHFDEKEKMYLPTLAFGILMT 126

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD  ++ TGGRNGYGAKLTNIFST+F +   +  R+  ++Q +T+NM     P I 
Sbjct: 127 SSNYDDTEQRVTGGRNGYGAKLTNIFSTKFTVLLQENGRV--FEQTWTDNMKNTQSPRIE 184

Query: 206 KCKE-GDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
             K+   N+ + SF PD  KF MT  L+ D  A M +R VD+AGC    +K+ +NG  + 
Sbjct: 185 DVKDKKKNFIRFSFTPDYMKFGMTSGLDRDHAAYMMRRAVDVAGC-NIGLKLIINGEELK 243

Query: 264 VKSFAEYVDMYPKS----VTRFHE 283
           + +F +Y  M  +S    +T+F+E
Sbjct: 244 IANFEQYARMVYRSINPEITQFYE 267


>gi|340056049|emb|CCC50378.1| putative DNA topoisomerase II, fragment [Trypanosoma vivax Y486]
          Length = 1195

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 389/1178 (33%), Positives = 610/1178 (51%), Gaps = 136/1178 (11%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y+K + +EH+L+RP+ YIGSI+  +  +++++E    M+  ++    GL KI DEIL+NA
Sbjct: 7    YKKLTPIEHVLVRPEMYIGSIDTISTPMFVFDESKGRMVWESMRLNHGLLKIVDEILLNA 66

Query: 91   ADN-KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            +DN   +  +M  ++V I    + I++ N G G+P+   +E  +Y+PE++FGHLLTSSNY
Sbjct: 67   SDNISNKGGRMTYIRVRITDTGE-ITIENDGAGIPIVKSREHKLYIPEMVFGHLLTSSNY 125

Query: 150  DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            DD+ + T  GR+GYGAKLTNI S  F +      R  ++   + +NM K + P +S    
Sbjct: 126  DDDAQSTVAGRHGYGAKLTNILSLNFSVCCRTNGR--EFHMSWQDNMRKATAPRVSNVDP 183

Query: 210  GD-NWTKVSFKPDLAKFNMTH--LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
             + N T+V F PD  +F +    +  D+  ++ KRV+DLA  +  S+++ LNG     KS
Sbjct: 184  KERNITRVKFLPDYERFGLKEKKISTDMRRVLHKRVMDLAA-MYPSIQITLNGTSFGFKS 242

Query: 267  FAEYVDMYPKSVTRFHE----RVNERWEICV----TLSEGQFQQVSFVNGIATIKGGTHV 318
            F +Y  +Y  +     E     V E    CV    +L+ G  +  S VNG+ T  GGTH 
Sbjct: 243  FKDYAKLYSIASDTGEEPPAPYVYESRSGCVAFVPSLTPGVRRIFSVVNGVVTYNGGTHC 302

Query: 319  DYVANQVANHVMAVV--NKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
               A ++ +  +  V  N K +N  V  + V  H  + V  +   P FDSQ K  L    
Sbjct: 303  T-AAQEILSGSLENVERNLKKENKVVDTNRVLRHFTILVFLVQVQPKFDSQNKARLV--- 358

Query: 377  SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TKTEDVRGISK 431
             S  +   +  + ++K   +   +E  ++  + + +++L +  G     +    +  I+K
Sbjct: 359  -STPNMPRVPRQDVQKYLLRLPFLEANVNTLSGQLAQELNREIGAGRRMSSKALLTSITK 417

Query: 432  LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
            L DA           TLI+TEGDSAK+LA   LS   +   GVFPLRGKLLNVR  +  +
Sbjct: 418  LVDATTTRRDPRYIRTLIVTEGDSAKSLAQNSLSSEQKRYTGVFPLRGKLLNVRNKNLKR 477

Query: 492  VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            + N  E+ ++   LGL+   +Y + + LRY  +++MTDQ                     
Sbjct: 478  LRNCKELQDLFCALGLELDKDYKDAEELRYQRVLVMTDQ--------------------- 516

Query: 552  FCFMLAQDHDGSHIKGLLINFIHSFWPSLL-KIPSFLVEFITPIVKATNKNGKVLSFYSM 610
                   D DGSHIKGL+IN   S WPSLL + P F+  F TPIVK   ++  VLSF+S+
Sbjct: 517  -------DADGSHIKGLVINAFESLWPSLLVRNPGFISIFSTPIVKVRLRDKSVLSFFSL 569

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
             ++  W+ S     +S++ KYYKGLGTST+ EGKEYFQ++  H    +  D  D + ++ 
Sbjct: 570  KEFHKWQRS--NPNTSYTCKYYKGLGTSTTAEGKEYFQDMDKHTMRLLV-DRSDHKLLDH 626

Query: 671  AFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVD 727
             F  +++E RK W+ +   F     +D+ +K +  S+FV+KE++ F++    R++   VD
Sbjct: 627  VFDSQEVEWRKDWMTKANAFTGEVDIDRSKKSLTVSEFVHKEMVHFALVGNARALAHSVD 686

Query: 728  GLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNN 787
            GLKP QRKIL+   +R+  + AKVAQ SGY+SE S++HHGE SL  T++ MAQ+F G NN
Sbjct: 687  GLKPSQRKILWALLRRSGNESAKVAQLSGYISEASSFHHGESSLQETMIKMAQNFTGGNN 746

Query: 788  INLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
            INLL P GQFG+R Q G D A+ RYIFT+LS + R LFP +DD LLDY+ E+GQQ+EP  
Sbjct: 747  INLLIPEGQFGSRQQLGNDHAAPRYIFTKLSKVARLLFPSEDDPLLDYVVEEGQQVEPNH 806

Query: 848  YMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIE 907
            Y+PIIP +L NG  G+  G ++           + V+RL+         PW  G+ G + 
Sbjct: 807  YVPIIPMLLCNGVRGMINGEAAK----------SVVKRLV---------PWAVGYQGEVR 847

Query: 908  KTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQY 967
            +    E    + V G         + + ELP     + +R+ + ++  ++   +     Y
Sbjct: 848  RGPDGE----FIVVGTYHYYKGGRVHVTELPWTCSVEAFRDHVSALAKRD--IVHRIADY 901

Query: 968  SDDTTVDFEVFLSEESMMRTKQE----GLLKKFKLTTTISTSNMHLFDSKGVIKKYDTP- 1022
            S    VD ++ L+  ++    +     GL ++  +  T+       F   G +   ++  
Sbjct: 902  SGANHVDIDLELANGAVTTYAECENELGLTQRVHINGTV-------FSPSGTLTPLESDL 954

Query: 1023 EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLL 1082
              IL+  +  RL+ Y++R++  L  LE ELL+ ++ ++F+     G I   N        
Sbjct: 955  SPILQWHYDRRLDMYKRRRQRNLSLLEQELLREKSTLKFVQHFREGNIDFQN-------- 1006

Query: 1083 ELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLLSMAIGTLT 1140
                                       TE + E   V  G+  +D  +DY+L   I   T
Sbjct: 1007 --------------------------ATEATLEKICVKLGLVRVDDSFDYILRKPITFYT 1040

Query: 1141 LEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
               V+ LL    +    ++ L+K TP  +W+ +LD  D
Sbjct: 1041 KTSVENLLKKISETERRIETLKKTTPVQIWLTELDQFD 1078


>gi|47216863|emb|CAG11670.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1568

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 305/582 (52%), Positives = 393/582 (67%), Gaps = 72/582 (12%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQA---------------------------L 58
           ++E +YQKK+QLEHILLRPDTYIGS+E  TQ                            +
Sbjct: 13  SVERVYQKKTQLEHILLRPDTYIGSVEPVTQVGPGSTAPRPKTTPFLEYSCPIWFFFQQM 72

Query: 59  WIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHN 118
           W+++EE   M  R ++YVPGLYKIFDEILVNAADNKQRD  M A+K+ ID E + IS+ N
Sbjct: 73  WVFDEEV-GMNQREVTYVPGLYKIFDEILVNAADNKQRDKNMTAIKITIDPESNTISIWN 131

Query: 119 SGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
           +G G+PV  H++E +YVP LIFGHLLTSSNYDD+ KK TGGRNGYGAKL NIFST+F +E
Sbjct: 132 NGKGIPVVEHKDEKMYVPALIFGHLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVE 191

Query: 179 TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALM 238
           TA  +    +KQ + NNM K SEP + K  +GD++T V+F+PDL+KF M  L+ D +AL+
Sbjct: 192 TACKEYRHSFKQTWQNNMTKTSEPKV-KLFDGDDFTCVTFQPDLSKFKMEKLDKDTMALL 250

Query: 239 KKRVVDLAG-CLGKSVKVELNGHRVPVKSFAEYVDMYPK--------SVTRFHERVNERW 289
            +R  D+AG C G  VKV LNG ++PV  F  YVD+Y K        ++   +E VNERW
Sbjct: 251 TRRAYDVAGSCRG--VKVTLNGKKLPVNGFRSYVDLYVKDKLDETGVALKVVNETVNERW 308

Query: 290 EICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVK 348
           E+C+TLSE  FQQ+SFVN IAT KGG H+DYV +Q+   ++ VV KKNK    VK   VK
Sbjct: 309 EVCLTLSEKGFQQISFVNSIATTKGGRHIDYVVDQIVAKLIEVVKKKNKAGVTVKPFQVK 368

Query: 349 NHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKV--------------- 393
           NH+WVFVNALI+NP+FDSQTKE +TL+  SFGSKC LS++F++ V               
Sbjct: 369 NHIWVFVNALIENPSFDSQTKENMTLQTKSFGSKCPLSDKFIRAVRTPPGRPSSCTRAVK 428

Query: 394 --------TAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSE 444
                       GIVE++L+W  FK    L KK    K   ++GI KL+DAN AGG++S 
Sbjct: 429 SRCLCHLQATNCGIVESILNWVKFKAQTQLNKKCSSVKHSKIKGIPKLDDANDAGGKHSS 488

Query: 445 QCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKI 504
           +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREA+  Q++ N+EI NI KI
Sbjct: 489 ECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREATHKQIMENAEINNIIKI 548

Query: 505 LGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFI 543
           +GL+    Y++   ++SLRYG +MIMTDQV       L WF+
Sbjct: 549 VGLQYKKSYDDAESLRSLRYGKIMIMTDQVSCR----LGWFV 586



 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 243/562 (43%), Positives = 355/562 (63%), Gaps = 45/562 (8%)

Query: 671  AFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADL 718
            AFSKKK + RK+WL  F            P  +L   + +++ Y+DF+NKELILFS +D 
Sbjct: 787  AFSKKKTDDRKEWLTNFMEDRRQRRMHGLPEQYLYGSQARHLSYNDFINKELILFSNSDN 846

Query: 719  QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
            +RSIPS+VDGLKPGQRK+LF   KRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +
Sbjct: 847  ERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNL 906

Query: 779  AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
            AQ+FVGSNN+N+LQP GQFGTR  GGKDAAS RYIFT LSP+ + LFP  D  LL +L +
Sbjct: 907  AQNFVGSNNLNILQPLGQFGTRINGGKDAASPRYIFTMLSPLAKLLFPAVDSNLLKFLYD 966

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPW 898
            D Q++EP WY+PIIP VLVNG+EGIGTGW+  IPNY+ R+IV N+ R+L+ +    M P 
Sbjct: 967  DNQKVEPEWYIPIIPMVLVNGAEGIGTGWACKIPNYDVREIVNNINRMLSRQEPLQMLPS 1026

Query: 899  YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII--- 954
            Y+GF G I +    +    Y V+G +  +++ T+ I ELP+R WTQ Y+E  LE ++   
Sbjct: 1027 YKGFKGVIHELGQNQ----YLVSGEVSVIDKNTVEITELPVRTWTQAYKESVLEPMLQGS 1082

Query: 955  DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM-----H- 1008
            D+  + I  +++Y  DTTV F V +SEE + + +  GL K FKL ++++ ++M     H 
Sbjct: 1083 DKTPALISDYKEYHTDTTVKFLVRMSEEKLAQAEAAGLHKVFKLQSSLTCNSMVTACFHR 1142

Query: 1009 ----LFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILG 1064
                LFD  G +K+Y++ + IL+EFF +RL +Y+ R+   + +L  E  KL N+ RF+L 
Sbjct: 1143 PEHVLFDHMGCLKRYESVQDILKEFFELRLHYYKLRRDWLVGSLGAEAAKLSNQARFVLE 1202

Query: 1065 VVNGEIVVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEESEENPEVV 1120
             + G+I + N+ + +L+  L QKGF   P      ++  E     +  E  +++E  E  
Sbjct: 1203 KIEGKISIENKSKRELIRMLVQKGFESDPVAAWTRAQEKELRRFQSKREPRQAQEEDEGN 1262

Query: 1121 NGVQSI--------DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVK 1172
            +   S+        +++Y+L+M +  LT EKV+ LL  RD    E+++L++ +PE LW +
Sbjct: 1263 DSDSSLDSGSSSGPNFNYILNMPLWCLTKEKVEELLKQRDLKRGELNELQRKSPEDLWKE 1322

Query: 1173 DLDALDMQLDELDKSDARAEEE 1194
            DL      ++EL+K +A   EE
Sbjct: 1323 DLAVF---VEELEKLEAVEREE 1341



 Score = 43.5 bits (101), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 1/40 (2%)

Query: 595 VKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKG 634
            K   KN + ++FYS+P++E WK+    N  SW IKYYKG
Sbjct: 664 CKQATKNKQEVAFYSIPEFEEWKKQT-DNYKSWHIKYYKG 702


>gi|340059390|emb|CCC53774.1| putative DNA topoisomerase II, fragment [Trypanosoma vivax Y486]
          Length = 966

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 299/635 (47%), Positives = 411/635 (64%), Gaps = 56/635 (8%)

Query: 47  YIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPK-MDAVKV 105
           YIG+IE  T+ +W+Y+E    M  R  ++ PGLYKIFDEILVNAADNK RDP    A+KV
Sbjct: 2   YIGTIEPVTEDMWVYDEGESIMKMRNCTWTPGLYKIFDEILVNAADNKVRDPHGQTAIKV 61

Query: 106 VIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGA 165
            ID    ++ V+N+G+G+PV+ H+E  ++VPE+IFGHLLTSSNY+D   K TGGRNG+GA
Sbjct: 62  WIDVNKGMVRVYNNGEGIPVQRHREHNLWVPEMIFGHLLTSSNYNDAEAKVTGGRNGFGA 121

Query: 166 KLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKF 225
           KLTN+FS  F +ETA  +  KK+   +  NM +               T V+F PD  KF
Sbjct: 122 KLTNVFSKCFEVETAHSRSRKKFFMRWRRNMLE------------SELTVVTFYPDFEKF 169

Query: 226 NMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP----KSVTRF 281
            +T   +D+V LM++RV D+AGC  K+++  LN  ++   +F+EYVD+YP    +     
Sbjct: 170 GLTGFSEDMVLLMQRRVYDIAGCTDKTLRCYLNDTKIACSTFSEYVDLYPTMGEERKPAS 229

Query: 282 HERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN 341
           + RVN+RWE+CV +S   FQQVSFVN IAT +GGTHV Y+ +Q+ + V+    +K+K   
Sbjct: 230 YARVNDRWEVCVRVSNIGFQQVSFVNSIATTRGGTHVKYIGDQIISKVVEQAMRKSKT-E 288

Query: 342 VKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVE 401
           VK H ++ HL++F+N LI+NP FDSQTKETL   ++ FGS C+L    ++ +  KS I++
Sbjct: 289 VKPHMIRPHLFMFINCLIENPGFDSQTKETLNTPKTRFGSTCDLPSSMIEYIL-KSSILD 347

Query: 402 TLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALA 460
             +  AN K ++++  K      + + GI KL+DAN AGGR+S +CTLILTEGDSAKAL 
Sbjct: 348 RAVEMANSKLTREMASKLRNADRKQILGIPKLDDANEAGGRHSHRCTLILTEGDSAKALC 407

Query: 461 MAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLR 520
            AGL+V  RD FGVFPLRGK LNVR+AS  +V+  +E   + KI+GL    +Y + + LR
Sbjct: 408 TAGLAVKDRDYFGVFPLRGKPLNVRDASLKKVMACAEFQAVSKIMGLDIRQKYTSSEGLR 467

Query: 521 YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
           YGHLMIM+D                            QDHDGSHIKGL+IN IH++WP L
Sbjct: 468 YGHLMIMSD----------------------------QDHDGSHIKGLIINMIHNYWPDL 499

Query: 581 LKIPSFLVEFITPIVKATNKNGK-------VLSFYSMPDYEAWKESLGGNASSWSIKYYK 633
           LK+P FL +FITPIVKA  K G+        +SF+SMPDY  WK ++G    ++ ++YYK
Sbjct: 500 LKVPGFLQQFITPIVKA-RKKGRGAGAEEGTISFFSMPDYFEWKNAIGDGIKNYELRYYK 558

Query: 634 GLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAI 668
           GLGTS +KEG+EYF+NI  H++  + E  +   A+
Sbjct: 559 GLGTSGAKEGREYFENIDRHREGELRETPETHRAV 593


>gi|327409604|ref|YP_004347024.1| DNA topoisomerase II [Lausannevirus]
 gi|326784778|gb|AEA06912.1| DNA topoisomerase II [Lausannevirus]
          Length = 1090

 Score =  582 bits (1500), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 405/1194 (33%), Positives = 622/1194 (52%), Gaps = 162/1194 (13%)

Query: 32   QKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAA 91
            Q+ +  +  L RP+T++GSI       W + EE+K M   ++ +  GL +I+ EI+ N  
Sbjct: 5    QRLNDFQFALHRPETFLGSIRPLPHDRWYWSEENKKMKFGSLVFPEGLERIYYEIVSNGI 64

Query: 92   DNKQRDPK----MDAVKVVIDQEHDLISVHNSGDGVPVEIHQ-----EEG------VYVP 136
            DN  R  K    M ++KV +++E    +V N G  +PVE  +     E G      +Y  
Sbjct: 65   DNMFRSQKSGIPMKSIKVTLNRETGYCTVWNDGAHIPVEKKEYSYTDELGNTTTSLLYPA 124

Query: 137  ELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
            EL FG+   S+NY+D+  + T GRNG GAKLT++FS  F++   D ++   +KQ F +N+
Sbjct: 125  ELFFGYSKASTNYNDSEVRKTSGRNGLGAKLTSVFSKHFVVRCFDPEKKLIFKQEFFDNL 184

Query: 197  GKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVE 256
             ++SEP + KC +   WT++SF PD  +F +    D +V+  +K + D +   G  + V+
Sbjct: 185  TRRSEPVLEKCTKSRGWTEISFLPDFERFGLDGWSDALVSRFQKTMRDASLVTG--LIVD 242

Query: 257  LNGHRVPVKSFAEYVDMYPK-------------SVTRFHERVNERWEICVTLSEGQFQQV 303
             N  +    S  EY  ++               S     + V++     V    GQ   +
Sbjct: 243  FNEEKFSFSSLEEYAKLFSSENPNILALKSADSSFVLLEKNVSD-----VVFESGQETSL 297

Query: 304  SFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK-----NANVKAHNVKNHLWVFVNAL 358
            SFVNG+    G  HV+   + V   ++   N K K      A++K      H  +F+   
Sbjct: 298  SFVNGLEVFTG-VHVNAWKHAVLMPLLKAFNAKQKAEGKPKASMKQLECFFH--IFLVCD 354

Query: 359  IDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN 418
            +D P F SQTK  L    S     C+L EE +KK+   S + E          S+   + 
Sbjct: 355  LDKPEFTSQTKHELA---SPVPKVCKLKEEQVKKLLKWSFVPEL--------SSRLDPRK 403

Query: 419  DGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGL-SVVGRDRFGVFPL 477
                 +    + K++DA LAG   S +CTLILTEGDSAK LA++G  S+  R+++G F L
Sbjct: 404  LKKTKKLELNLKKVDDAQLAGTERSSECTLILTEGDSAKTLAVSGFTSLQDREKYGAFAL 463

Query: 478  RGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLS 537
            +GK+LN   A++  +  N E+  ++ +LGL + +    V++LRYG +++M D        
Sbjct: 464  KGKVLNTTNATAKAIGKNKELEMLRVVLGLSKDL----VRTLRYGKVLLMCDA------- 512

Query: 538  FLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA 597
                                 D DG HI+ L++ F H F+P LL    F+V   TPI+KA
Sbjct: 513  ---------------------DEDGKHIEALVLAFFHKFFPELLN-NGFVVSLQTPILKA 550

Query: 598  TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDF 657
                 K L FYS   +E W ++  G+  + ++KY KGLG+S  ++G++Y     L K  +
Sbjct: 551  FPTKNKELWFYSTKQFETWVQNNPGH-KNLNVKYLKGLGSSKPEDGRKYLAEQKLLK--Y 607

Query: 658  VWEDDQDGEAIELAFSKKKIEARKKWLLQ-FEPGNHLDQKEKYIKYSDFVNKELILFSMA 716
            V  D  + E  ELAF+K K + RKKWL +  EP     Q E  +  S F+ ++L  +  A
Sbjct: 608  V-SDGTEKEYFELAFAKSKADDRKKWLAEKVEPCT---QYEGDMPLSRFIKEKLSSYHRA 663

Query: 717  DLQRSIPSMVDGLKPGQRKILFCSFKRNFI---KEAKVAQFSGYVSEHSAYHHGEQSLAS 773
            + +RSIPS+ DGLKP QRK+L+  F  N I   K  KV + +G V+  + YHHGE SL+ 
Sbjct: 664  NNRRSIPSVYDGLKPSQRKVLYACFASNVIGPSKTEKVERLAGKVASIAGYHHGEVSLSG 723

Query: 774  TILGMAQDFVGS-NNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKL 832
            TI+GMAQ+FVGS NNI LL P+G +GTR +GGKD ++ARY+ T   P+TR LFP +DD L
Sbjct: 724  TIVGMAQNFVGSGNNIPLLYPDGSYGTRLRGGKDHSAARYLSTYALPLTRILFPAEDDDL 783

Query: 833  LDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMM 892
             + + ED +  EP  Y+PI+P +LVNG+ GIGTG S+ IP++NP DI   +R  L+ +  
Sbjct: 784  YERVLEDNELNEPVNYLPILPMILVNGACGIGTGHSTEIPSHNPLDICEWIRCWLDNKEK 843

Query: 893  EPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLES 952
              + PW+RGF G +E    K  G T+   GI+E++++   RI E P+  WT D +  LE+
Sbjct: 844  PYLVPWWRGFKGKVEVEDGK--GRTF---GILEKLSKEKWRISETPVGLWTYDCKMHLET 898

Query: 953  IIDQNDSFIRGFR-QYSDD-------TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTIST 1004
            +  + +  I+ F  +Y+D+       TT DF   +S                KL+   S 
Sbjct: 899  L--EKNKHIKSFEDKYTDEEAAFVITTTKDFTPTMS--------------NLKLSKAFSL 942

Query: 1005 SNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILG 1064
             NM   D   V  K+ + E+ILE++   RLE Y+KRK+  L +L  E++K  NK RF+  
Sbjct: 943  KNMTALDEDDVPVKFRSTEEILEKYCDARLELYQKRKEKLLNDLSQEIVKQANKQRFLKD 1002

Query: 1065 VVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQ 1124
            V+N   V+N +++ D+LL              K +E +     D+ + S           
Sbjct: 1003 VLNN--VLNMKEQEDVLL--------------KKMEEM---NYDKWQNS----------- 1032

Query: 1125 SIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
               +DYL+SM I TLT  ++  +     KL E+   L   +P+ +W ++LD  +
Sbjct: 1033 ---FDYLVSMPIRTLTKGRLAEVGEILRKLKEKHSLLSDKSPKEMWKEELDTFE 1083


>gi|283771382|gb|ADB28927.1| topoisomerase II-like protein [Zea mays subsp. mays]
          Length = 380

 Score =  577 bits (1486), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 286/409 (69%), Positives = 338/409 (82%), Gaps = 37/409 (9%)

Query: 196 MGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKV 255
           MGKKSEP I+KCK+G+NWT+V+FKPDLAKFNMTHLEDDVVALM+KRVVD+AG LGK+VKV
Sbjct: 1   MGKKSEPQITKCKQGENWTRVTFKPDLAKFNMTHLEDDVVALMRKRVVDMAGTLGKTVKV 60

Query: 256 ELNGHRVPVKSFAEYVDMYPKSVT--------RFHERVNERWEICVTLSEGQFQQVSFVN 307
           EL+G RVP+KSF +YVD+Y KS          R +E+VN+RWE+CV+ SEGQFQQVSFVN
Sbjct: 61  ELDGQRVPIKSFCDYVDLYMKSANCDRPDNFKRIYEQVNDRWEVCVSQSEGQFQQVSFVN 120

Query: 308 GIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            IATI+GG+HVDYV NQ+ANHV+A+VNKKNKNAN+K HNVK+HLWVFVNALIDNPAFDSQ
Sbjct: 121 RIATIRGGSHVDYVTNQIANHVVAIVNKKNKNANMKLHNVKSHLWVFVNALIDNPAFDSQ 180

Query: 368 TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR 427
           TKETLT RQ SFGSKCELS +FLKKV  KSG++E +LSWA+FK SK+LKK DG+K   + 
Sbjct: 181 TKETLTTRQGSFGSKCELSSDFLKKV-EKSGVIENVLSWADFKLSKELKKTDGSKKSRIS 239

Query: 428 GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREA 487
           GI KLEDAN AGG++S++CTLILTEGDSAKALAM+G++VVGRD +GVFPLRGKLLNVREA
Sbjct: 240 GIPKLEDANEAGGKDSDKCTLILTEGDSAKALAMSGIAVVGRDYYGVFPLRGKLLNVREA 299

Query: 488 SSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
           +  Q+++N+EI +IK+ILGL+ G +Y + K LRYGHLMIMTDQ                 
Sbjct: 300 NHKQIMDNAEIQHIKQILGLQHGKQYESTKGLRYGHLMIMTDQ----------------- 342

Query: 548 WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK 596
                      DHDGSHIKGLLINFIHSFWPSLLK+PSFLVEFITPI+K
Sbjct: 343 -----------DHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFITPIIK 380


>gi|183987586|gb|ACC65783.1| topoisomerase II [Pleurotus nebrodensis]
          Length = 534

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 288/566 (50%), Positives = 384/566 (67%), Gaps = 48/566 (8%)

Query: 160 RNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFK 219
           R+GYGAKL NI+S EF IETAD    KKY Q +T NM +  +  I+     + +T+V+FK
Sbjct: 1   RHGYGAKLANIYSLEFTIETADKVNGKKYSQTWTKNMTQVGKAKITNNSRNEEYTRVTFK 60

Query: 220 PDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVT 279
           P+L +F MT ++ D   L++KRV D+AG + K VKV LN  R+ +K+F +YV+MY ++ T
Sbjct: 61  PELTRFGMTDIDPDTAGLLRKRVYDMAGTV-KDVKVYLNNERLKIKTFKQYVEMYIEAAT 119

Query: 280 R----------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
                             +E+++ RWE+    S+G FQQVSF N I+TIKGGTHV+Y+A+
Sbjct: 120 AGAKENFGGGAQAKPTVIYEQISPRWEVAFATSDGTFQQVSFANSISTIKGGTHVNYIAD 179

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
           Q++  ++A + KKNK A VK   VKNH+W+FVNALI+NP FDSQTKETLTL    FGS+ 
Sbjct: 180 QLSKSIIAHIAKKNKAATVKPAQVKNHMWIFVNALIENPTFDSQTKETLTLPAGKFGSRP 239

Query: 384 ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            LSEEF+KKV  KS  ++ +L+WA FK  + +KK DG+K   + G++KL DAN AG +N+
Sbjct: 240 ALSEEFMKKV-QKSSTIDQVLNWAKFKADQQIKKTDGSKRNRLTGMAKLSDANNAGTKNA 298

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
           E+CTLILTEGDSAK+LA+AGL+VVGRD FGVFPLRGKLLNVREA  +Q++ + EI NIKK
Sbjct: 299 EKCTLILTEGDSAKSLAVAGLAVVGRDNFGVFPLRGKLLNVREARHDQIMKSEEIQNIKK 358

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           I+GL+   EY NV SLRYG LMIMTD                            QDHDGS
Sbjct: 359 IMGLQHNKEYTNVSSLRYGRLMIMTD----------------------------QDHDGS 390

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
           HIKGLLINF+  F+PSLLK+P FLVEF+TPIV+ T  N +  +F+++P+YE W E    +
Sbjct: 391 HIKGLLINFLDHFYPSLLKVPEFLVEFVTPIVRVTKGNQRK-NFFTIPEYETWLEET-PD 448

Query: 624 ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
           +  W+ KYYKGLGTS+  + +EYF  +  H   F   +D++   I+LAFSKKK + RK+W
Sbjct: 449 SKKWTAKYYKGLGTSSDADAREYFSQMGKHMIPFATMEDEERGLIDLAFSKKKADDRKEW 508

Query: 684 LLQFEPGNHLDQKEKYIKYSDFVNKE 709
           L QF+PG +LD     I ++DF+NKE
Sbjct: 509 LRQFKPGTYLDHNIDEIPFTDFINKE 534


>gi|10121861|gb|AAG13403.1|AF285157_1 topoisomerase II alpha-2 [Homo sapiens]
          Length = 526

 Score =  564 bits (1454), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 285/501 (56%), Positives = 361/501 (72%), Gaps = 38/501 (7%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29  SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88  ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
           K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207 KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            F  YVDMY K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266 GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318 VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
           VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 326 VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 385

Query: 377 SSFGSKCELSEEFLK-------------------------KVTAKSGIVETLLSWANFKQ 411
            SFGS C+LSE+F+K                         K     GIVE++L+W  FK 
Sbjct: 386 KSFGSTCQLSEKFIKAHLYSRFLIDPFFPNMIPNMIFSFSKAAIGCGIVESILNWVKFKA 445

Query: 412 SKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD 470
              L KK    K   ++GI KL+DAN AGGRNS +CTLILTEGDSAK LA++GL VVGRD
Sbjct: 446 QVQLNKKCSAVKHNRIKGIPKLDDANDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRD 505

Query: 471 RFGVFPLRGKLLNVREASSNQ 491
           ++GVFPLRGK+LNVREAS  Q
Sbjct: 506 KYGVFPLRGKILNVREASHKQ 526


>gi|312076268|ref|XP_003140785.1| hypothetical protein LOAG_05201 [Loa loa]
 gi|307764049|gb|EFO23283.1| hypothetical protein LOAG_05201 [Loa loa]
          Length = 729

 Score =  564 bits (1453), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 324/741 (43%), Positives = 460/741 (62%), Gaps = 83/741 (11%)

Query: 493  LNNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
            + N+E+  + KI+GL+  ++Y+   ++K+LRYG +M+M DQ                   
Sbjct: 1    MENAEVNALLKIIGLQYRLKYDKDEDMKTLRYGKIMVMADQ------------------- 41

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYS 609
                     D DGSHIKGL+INFIH  WP+L++  +F+ EFITPIVKAT K  + +SF+S
Sbjct: 42   ---------DQDGSHIKGLVINFIHYNWPALVR-RNFVEEFITPIVKAT-KGKEEISFFS 90

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            +P+Y+ W  +   N  ++ IKYYKGLGTSTSKE KEYF ++  H+  F +  ++D +A++
Sbjct: 91   LPEYKEWLNN-TENWKTYRIKYYKGLGTSTSKEAKEYFMDMRRHRIQFRYSGEEDDQALD 149

Query: 670  LAFSKKKIEARKKWLLQF--------EPG---NHLDQKEKYI-KYSDFVNKELILFSMAD 717
            +AFSKKKIE RK WL  +        E G    +L  K+ ++  + DFVNKEL+LFS  D
Sbjct: 150  MAFSKKKIEERKIWLTNWMAERRSRREDGLTEEYLYDKDTHVVSFKDFVNKELVLFSNCD 209

Query: 718  LQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
             +RSIPS+VDGLKPGQRK+LF  FKR   KE KVAQ +G V E SAYHHGE SL STI+ 
Sbjct: 210  NERSIPSLVDGLKPGQRKVLFTCFKRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVN 269

Query: 778  MAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLN 837
            +AQDFVGSNNINLL P GQFGTR QGGKD+AS RYIFT+L+P+T+ LFP  D+ +L +L 
Sbjct: 270  LAQDFVGSNNINLLLPIGQFGTRLQGGKDSASPRYIFTQLNPVTKALFPSIDENVLRFLY 329

Query: 838  EDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH- 896
            E+ Q+IEP WY P+IPTVLVNG+EGIGT WS+ +P YNPR+IV N+R L++G+  EP   
Sbjct: 330  EENQKIEPEWYCPVIPTVLVNGTEGIGTAWSTKVPCYNPREIVDNMRALIDGK--EPKTF 387

Query: 897  ------PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-F 949
                  PWY+ F GTIE+   +     +   G +  +N  T+ I ELPIR WTQ Y+E  
Sbjct: 388  GKKNSIPWYKHFRGTIEQLDDQR----FICNGEVAIINNETIEITELPIRTWTQTYKEAV 443

Query: 950  LESIIDQND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSN 1006
            L  ++D ND   + I  F++Y  DTTV F V +S + +  +K+EGL K FKL + I+T++
Sbjct: 444  LVPMMDGNDKQPAVITDFKEYHTDTTVKFVVKMSSDKLRASKEEGLHKVFKLQSVINTTS 503

Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
            M LFD  G +++++    I +EFF IR + Y +RK  Q   L  +  +L N+ RFIL  +
Sbjct: 504  MVLFDPFGYLRRFENVTDICKEFFEIRKKKYIERKSFQEGLLRAQSERLSNQARFILAKI 563

Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFP-----KNSKSIEAVVAGAT----------DETE 1111
             GEI++ N+++  ++ +L +  F P P     +  K  E ++ G            +  E
Sbjct: 564  KGEILIENKRKATIVEQLIKMSFKPDPVKKWKEERKKQELMMLGEVAQDEDEEEQEENEE 623

Query: 1112 ESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWV 1171
            ++ ++ E+   +   DYDYL+ MAI  L+ E+   LL + +    E+  L + T   LW 
Sbjct: 624  DTHQSKELAAKLS--DYDYLVGMAILKLSEEEKDKLLKESETKLSELKLLEEMTWADLWN 681

Query: 1172 KDLDALDMQLDELDKSDARAE 1192
             DL+     L EL+K +A+ +
Sbjct: 682  NDLNCF---LTELEKQEAKEQ 699


>gi|288565|emb|CAA78821.1| DNA topoisomerase II [Homo sapiens]
          Length = 1031

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 299/620 (48%), Positives = 411/620 (66%), Gaps = 26/620 (4%)

Query: 592  TPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 651
            TPIVKA+ KN + LSFYS+P+++ WK+ +  N  +W IKYYKGLGTST+KE KEYF ++ 
Sbjct: 1    TPIVKAS-KNKQELSFYSIPEFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADME 58

Query: 652  LHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKY 699
             H+  F +   +D  AI LAFSKKKI+ RK+WL  F            P   L     K+
Sbjct: 59   RHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKH 118

Query: 700  IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVS 759
            + Y+DF+NKELILFS +D +RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G V+
Sbjct: 119  LTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVA 178

Query: 760  EHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSP 819
            E SAYHHGEQ+L  TI+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT LS 
Sbjct: 179  EMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLST 238

Query: 820  ITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDI 879
            + R LFP  DD LL +L +D Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+I
Sbjct: 239  LARLLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREI 298

Query: 880  VANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPI 939
            V NVRR+L+G    PM P Y+ F GTI++    +    Y V+G I  V+  T+ I ELP+
Sbjct: 299  VNNVRRMLDGLDPHPMLPNYKNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPV 354

Query: 940  RRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKK 995
            R WTQ Y+E  LE ++   D+  + I  +++Y  DTTV F V ++EE + + +  GL K 
Sbjct: 355  RTWTQVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKV 414

Query: 996  FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKL 1055
            FKL TT++ ++M LFD  G +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL
Sbjct: 415  FKLQTTLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKL 474

Query: 1056 ENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEE 1115
             N+ RFIL  + G+I + NR + DL+  L Q+G+   P  +       A   DET+   +
Sbjct: 475  NNQARFILEKIQGKITIENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHD 534

Query: 1116 NPEVVNGVQS-IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDL 1174
            +    +G  S  D++Y+L+M++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL
Sbjct: 535  DSSSDSGTPSGPDFNYILNMSLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDL 594

Query: 1175 DALDMQLDELDKSDARAEEE 1194
             A    ++ELDK +++  E+
Sbjct: 595  AAF---VEELDKVESQERED 611


>gi|74188146|dbj|BAE37168.1| unnamed protein product [Mus musculus]
          Length = 511

 Score =  561 bits (1445), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 279/478 (58%), Positives = 354/478 (74%), Gaps = 14/478 (2%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 38  SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 96

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 97  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 156

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 157 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 215

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
           K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 216 KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 274

Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 275 GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 334

Query: 318 VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
           VDYV +QV + ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 335 VDYVVDQVVSKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 394

Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
            SFGSKC+LSE+F  K  +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 395 KSFGSKCQLSEKFF-KAASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 453

Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
           N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS  Q++
Sbjct: 454 NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIM 511


>gi|156394525|ref|XP_001636876.1| predicted protein [Nematostella vectensis]
 gi|156223983|gb|EDO44813.1| predicted protein [Nematostella vectensis]
          Length = 516

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 276/499 (55%), Positives = 361/499 (72%), Gaps = 18/499 (3%)

Query: 10  TTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI 69
           T S + N  G      ++E +Y KK+QLEHILLRPDTYIGS+E + Q +++Y++  + ++
Sbjct: 20  TNSPSKNAGGKKRKRLSVERIYTKKTQLEHILLRPDTYIGSVEPNKQNMFVYDDILEAIV 79

Query: 70  HRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQ 129
           +R I+YVPGL+KIFDEILVNAADNKQRDP M  +K+ I+ E + ISV N G G+P+E+H+
Sbjct: 80  NREITYVPGLFKIFDEILVNAADNKQRDPAMSTIKIEINPEKNFISVWNDGRGIPIEMHK 139

Query: 130 EEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYK 189
           E  VYVP +IFG LLTSSNY+D+ KK TGGRNGYGAKL NIFS +F +ETA  +  K++K
Sbjct: 140 EHQVYVPTMIFGQLLTSSNYNDDEKKVTGGRNGYGAKLCNIFSKKFSVETACLENKKRFK 199

Query: 190 QVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCL 249
           QV+TNNMGK +EP I +      +T ++F+PDL KF M  L+ D VAL+ +R  D+A  +
Sbjct: 200 QVWTNNMGKAAEPVIKEFTSNKEYTCITFQPDLEKFKMETLDRDTVALLTRRAYDIAASV 259

Query: 250 GKSVKVELNGHRVPVKSFAEYVDMYPKSVTR--------------FHERVNERWEICVTL 295
            + V V LNG ++ VK+F +YV +  K  T+               HE VN RWE+CVT+
Sbjct: 260 -RGVSVILNGKKLKVKTFKDYVQLCLKGATKDKEEDDEEEKKPTVVHEVVNNRWEVCVTV 318

Query: 296 SEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVF 354
           S+  FQQ SFVN IAT KGGTHV+YV +Q+ + +M V+ KKNK    +K   +K+HLWVF
Sbjct: 319 SDKGFQQASFVNSIATTKGGTHVNYVTDQIVDKLMTVIKKKNKGGLAIKPFQIKSHLWVF 378

Query: 355 VNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKD 414
           +N LI+NPAFDSQTKE +TLR   FGSKCELS++F+K V   SG++E +++W  FK+   
Sbjct: 379 INCLIENPAFDSQTKENMTLRAKDFGSKCELSDKFIKAV-QNSGVMENVMNWMRFKEKAQ 437

Query: 415 L-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFG 473
           L KK  G+K   +RGI KL+DAN AGG+NS  CTLILTEGDSAK LA++GLS+VGRDR+G
Sbjct: 438 LNKKCSGSKHSKIRGIPKLDDANDAGGKNSRHCTLILTEGDSAKTLAISGLSIVGRDRYG 497

Query: 474 VFPLRGKLLNVREASSNQV 492
           VFPLRGKLLNVREAS  QV
Sbjct: 498 VFPLRGKLLNVREASHKQV 516


>gi|385301382|gb|EIF45574.1| dna topoisomerase ii [Dekkera bruxellensis AWRI1499]
          Length = 623

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 295/621 (47%), Positives = 390/621 (62%), Gaps = 78/621 (12%)

Query: 6   RLPLTT-SNNANVVGPTAPNK-----TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALW 59
           R PL + +N  N  G    +K     T  + YQK +QLEHIL RPDTYIGS+EK     W
Sbjct: 23  RTPLASATNTVNSTGAKTSSKKNGGKTASDNYQKLTQLEHILKRPDTYIGSVEKFESEQW 82

Query: 60  IYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNS 119
           IY   +++M  + +S VPGL+KIFDEILVNAADNK RDP M  + V ID E++L SV N 
Sbjct: 83  IYNTTTESMEFKKVSIVPGLFKIFDEILVNAADNKIRDPSMKRIDVKIDPENNLFSVKND 142

Query: 120 GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
           G G+PVEIH +E +Y+PELIFG+LLTSSNY+D  KK TGGRNGYGAKL NIFSTEF ++T
Sbjct: 143 GRGIPVEIHTKEKIYIPELIFGNLLTSSNYNDKEKKVTGGRNGYGAKLCNIFSTEFTVKT 202

Query: 180 ADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK 239
           AD    K Y Q + NNM    +P I   K    +T++SFKPDLAKF M  L+DD++ +++
Sbjct: 203 ADRTNGKTYSQTWHNNMSIVDKPKIKPMKTKSEYTEISFKPDLAKFGMESLDDDILGVLR 262

Query: 240 KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTR------------------- 280
           +RV DL G + + ++V LNG  + + +F +Y ++Y K+++                    
Sbjct: 263 RRVFDLCGSV-RGIRVTLNGKALKINNFKQYTELYVKALSENQNGSSSRSSSXVKVEQID 321

Query: 281 --------------------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDY 320
                                +  +N+RWEI  +LS+G F QVSFVN IAT  GGTHVD 
Sbjct: 322 DADQSESSPAXLESTKKVPLIYYAINDRWEIAFSLSDGNFHQVSFVNSIATTSGGTHVDL 381

Query: 321 VANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFG 380
           + N + N +M  + KK++ A ++   +KN+++VF+N LI+NPAF SQTKE LT R S +G
Sbjct: 382 IVNMLVNKIMEHIKKKHRRAMLRPFQIKNNIFVFINCLIENPAFTSQTKEQLTTRPSQYG 441

Query: 381 SK-CELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG 439
            +  EL E FLKKV   SGI++ ++  A     + LK+ DG K   + G  KLEDAN AG
Sbjct: 442 GRXLELPETFLKKV-FNSGILDQVMDIAQANADRALKRMDGRKKNRITGYPKLEDANXAG 500

Query: 440 GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
            R   +CTLILTEGDSA  LA+AGL+VVGR+ +G +PLRGKLLNVREAS++Q++ N+EI 
Sbjct: 501 TREGYKCTLILTEGDSALTLAVAGLAVVGRNYYGCYPLRGKLLNVREASADQIMRNAEIQ 560

Query: 500 NIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLA 557
            IK+I+GL+   +Y+  N+KSLRYGHLMIMTD                            
Sbjct: 561 AIKQIMGLQHKKKYDPANIKSLRYGHLMIMTD---------------------------- 592

Query: 558 QDHDGSHIKGLLINFIHSFWP 578
           QD DGSHIKGL+INF+  F P
Sbjct: 593 QDTDGSHIKGLIINFLVDFLP 613


>gi|284504201|ref|YP_003406916.1| DNA topoisomerase II [Marseillevirus]
 gi|282935639|gb|ADB03954.1| DNA topoisomerase II [Marseillevirus]
          Length = 1089

 Score =  557 bits (1436), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 393/1187 (33%), Positives = 608/1187 (51%), Gaps = 159/1187 (13%)

Query: 37   LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
             +  L RP+T++GSI       W + EE KTM+  T+ +  GL +IF EI+ NA DN  R
Sbjct: 10   FQFALHRPETFLGSIRSLPHERWYWSEEKKTMLFGTLEFPEGLERIFYEIVSNAVDNFFR 69

Query: 97   DP----KMDAVKVVIDQEHDLISVHNSGDGVPVEIHQ-----EEG------VYVPELIFG 141
                   M +VKV +D+E    +V N G  + VE  +     E G      +Y  EL FG
Sbjct: 70   SSVSGIPMKSVKVSLDRETGYCTVWNDGAHISVEKKEYSYTDELGNTSSSLLYPAELFFG 129

Query: 142  HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            +   S+NY+D+  + T GRNG GAKLT+IFS  F++   D ++ + ++Q F +N+ +++ 
Sbjct: 130  YSKASTNYNDDEVRKTSGRNGLGAKLTSIFSKHFVVRCFDPEKQRIFQQEFFDNLTRRTP 189

Query: 202  PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            P I KC +   WT+V F PD A+F +    + +++  +K + D +   G S     N  +
Sbjct: 190  PVIEKCTKKKGWTEVRFLPDFARFGLDGWTEPLLSRFQKTLRDASLVTGLSA--SFNEEK 247

Query: 262  VPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQF-----------------QQVS 304
               ++  EYV ++  S   F         +C++  + +F                   +S
Sbjct: 248  FSFQTLPEYVALFSGSNPNF---------LCLSSPDSRFALLEKNPELVPTEPSQETSLS 298

Query: 305  FVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK-----NANVKAHNVKNHLWVFVNALI 359
            FVNG+    G  HV+   N V   ++   N K K      A++K      HL+V  +  +
Sbjct: 299  FVNGLEVFTG-VHVNAWKNAVLMPLLKAFNAKQKAEGKPKASMKQLECFFHLFVVCD--L 355

Query: 360  DNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKND 419
            D P F SQTK  L    S      ++S E +KK+  K G V+ L        S+   K  
Sbjct: 356  DKPEFTSQTKHELA---SPTPKTTKVSPEQIKKL-MKWGFVQEL-------SSRLDPKKT 404

Query: 420  GTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGL-SVVGRDRFGVFPLR 478
                + V  ++K++DA LAG   S +C LILTEGDSAK LA++G  S+  R+R+G F L+
Sbjct: 405  KKTKKLVLDLTKVDDAQLAGTSRSAECILILTEGDSAKTLAVSGFTSLKDRERYGAFALK 464

Query: 479  GKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSF 538
            GK+LN   A+   +  N E+  +K +LGL + +     K+LRYG +++M D         
Sbjct: 465  GKVLNTTNATQKTIGKNKELELLKNVLGLSKDLG----KTLRYGKVLLMCDA-------- 512

Query: 539  LLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKAT 598
                                D DG HI+GL++NF+H  +P LL+   F+    TPI+KA 
Sbjct: 513  --------------------DEDGKHIEGLVLNFLHKHYPELLE-KGFVQSLRTPILKAF 551

Query: 599  NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFV 658
                +   F+S   +E W     G+  +  ++Y+KGLG+S  ++G++Y     L    +V
Sbjct: 552  -LGKREEWFFSTTKFEEWLSKNPGH-KNLKVQYFKGLGSSRPEDGRKYLSEQKL--VSYV 607

Query: 659  WEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKY---IKYSDFVNKELILFSM 715
              D  +G   +LAFSK K   RK WL        L   E Y   +  SDF++K L  +  
Sbjct: 608  -ADGTEGAWFDLAFSKNKSNERKTWL-----AGSLTPDETYEGELSLSDFIDKRLSTYHR 661

Query: 716  ADLQRSIPSMVDGLKPGQRKILFCSFKRNFI---KEAKVAQFSGYVSEHSAYHHGEQSLA 772
            A+ +RSIPS+ DGLKP QRK+L+  F  N I   K+  V + +G V+  + YHHGE+SL 
Sbjct: 662  ANNRRSIPSVFDGLKPSQRKVLYACFSSNIIGKNKKKHVDRLTGEVASVAGYHHGEKSLT 721

Query: 773  STILGMAQDFVGS-NNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
             TI+GMAQDFVG  NN+ LL P+G FGTR +GGKD +++RY+ + +  I R +FP +DD 
Sbjct: 722  ETIIGMAQDFVGCGNNVRLLNPDGSFGTRLRGGKDHSASRYLSSFVEKIARVVFPPEDDD 781

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            L + + ED +  EP  Y+PIIP ++VNG+ GIGTG S+ IP +NP ++   +R  L  + 
Sbjct: 782  LYEKVFEDNEYNEPINYIPIIPLIVVNGACGIGTGHSTEIPPHNPLEVCHWIRCWLEEQE 841

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLE 951
               + PW++GF GT E    K         G++E++++T  +I E P+  WT D ++ LE
Sbjct: 842  TPKLSPWWKGFNGTTEVEEDK-----VKTFGVLEKMSKTKWKIVETPVGLWTYDCKKHLE 896

Query: 952  SIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFD 1011
            S+  Q    I+ F     D    F +  +++ +        +K  KL+TT S  NM   D
Sbjct: 897  SLETQKH--IKSFEDKYTDEKASFIINTTKDFI------PTIKNLKLSTTFSLRNMTALD 948

Query: 1012 SKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIV 1071
             K    K+ T + IL ++   RL  Y+KRK   L +L  E+LK  NK RF+  V++G  +
Sbjct: 949  EKDNPVKFSTVDDILLKYCPERLRLYQKRKDKMLADLSQEILKQANKQRFLKDVLDG--I 1006

Query: 1072 VNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYL 1131
            +  +++ +LLL+               +E +   A D+           NG     YDYL
Sbjct: 1007 LEMKQQEELLLQ--------------KMEDM---AYDKW----------NG----SYDYL 1035

Query: 1132 LSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
            + M I TLT  +++ +     KL E+  +L + TP+ +W  +L+  +
Sbjct: 1036 IGMPIRTLTKGRLREVGEILRKLKEKHAELSERTPKEMWKSELEVFE 1082


>gi|403180027|ref|XP_003888500.1| DNA topoisomerase II [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|375165611|gb|EHS62950.1| DNA topoisomerase II [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 506

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 271/506 (53%), Positives = 352/506 (69%), Gaps = 11/506 (2%)

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MP++E WKE    +   W+ KYYKGLGTS +K+ K+YF  ++ H+  F    + D   I+
Sbjct: 1    MPEFEKWKEE-NDDGRGWTSKYYKGLGTSDAKDAKKYFSRMSSHRIKFAPTQENDRHLID 59

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            +AF+KKK + RK+WL  FEPG HLDQ    I Y++F+NKELILFSMAD  RSIPSMVDG 
Sbjct: 60   MAFNKKKADDRKEWLRGFEPGTHLDQNVSQITYTEFINKELILFSMADNIRSIPSMVDGF 119

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KPGQRK+LF  FKR    E KVAQ  GY SEHSAYHHGE SL  TI+G+AQ+FVGSNNIN
Sbjct: 120  KPGQRKVLFACFKRKLKAEIKVAQLGGYCSEHSAYHHGEASLTQTIVGLAQNFVGSNNIN 179

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            +L PNGQFGTR  GGKDAASARYIFT +  ITR +FP  DD +L+YL +DG QIEP WY+
Sbjct: 180  VLSPNGQFGTRASGGKDAASARYIFTNVEKITRVIFPPADDNVLNYLTDDGTQIEPEWYI 239

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            PI+P VLVNGS GIGTGWSS IPNYNP DIV N+RR L  E MEPMHPW+RGF G I   
Sbjct: 240  PILPMVLVNGSSGIGTGWSSDIPNYNPVDIVNNLRRRLANEPMEPMHPWFRGFTGQI--- 296

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND---SFIRGFRQ 966
             + EA   Y V G  ++ +E T+ I ELP+R W Q Y+E +E+ I+  D   + ++ +R+
Sbjct: 297  -TSEAPGKYKVLGEWDQPDEDTIEITELPVRVWNQSYKEQIEAWINSTDKIPALVKDYRE 355

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
            Y  +TTV F + L+E      K+EG+ K FKL+  +S +NM  FD  G IKKY TPEQIL
Sbjct: 356  YHTETTVHFIISLTERGKDAIKKEGIEKVFKLSANLSITNMVCFDPSGKIKKYSTPEQIL 415

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
            ++F+ +RL +Y+KRK+  + +L L   +L N+ RF+L ++  ++VV+NRK+ +++ ELR+
Sbjct: 416  DDFYDVRLAYYQKRKEYLVNDLTLMYERLSNQARFVLMIIEKKLVVSNRKKAEIVAELRK 475

Query: 1087 KGFTPFPKNSKSIEAVVAGATDETEE 1112
              F PFP  +K      AG  D+ +E
Sbjct: 476  LEFGPFPVKAK---PKTAGDPDQADE 498


>gi|26334167|dbj|BAC30801.1| unnamed protein product [Mus musculus]
          Length = 507

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 277/473 (58%), Positives = 351/473 (74%), Gaps = 14/473 (2%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 38  SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 96

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 97  ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 156

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    ++Q + NNM K SE  I 
Sbjct: 157 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFRQTWMNNMMKTSEAKI- 215

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
           K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG   K VKV  NG ++PV 
Sbjct: 216 KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 274

Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG H
Sbjct: 275 GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 334

Query: 318 VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
           VDYV +QV + ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+ 
Sbjct: 335 VDYVVDQVVSKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 394

Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
            SFGSKC+LSE+F  K  +  GIVE++L+W  FK    L KK    K   ++GI KL+DA
Sbjct: 395 KSFGSKCQLSEKFF-KAASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 453

Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREAS 488
           N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS
Sbjct: 454 NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREAS 506


>gi|393906249|gb|EJD74229.1| hypothetical protein LOAG_18426 [Loa loa]
          Length = 554

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 279/482 (57%), Positives = 363/482 (75%), Gaps = 16/482 (3%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQA-LWIYEEESKTMIHRTISYVPGLYKIFD 84
           +IE++YQKKSQLEHILLRPDTYIGS+E   +  +W+Y+ E+  ++ R ISYVPGLYKIFD
Sbjct: 76  SIEKIYQKKSQLEHILLRPDTYIGSVEYTDRTPMWVYDTETDRIVQREISYVPGLYKIFD 135

Query: 85  EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
           EILVNAADNKQRDPKM+ +KV I++E + IS++N+G G+PV +H+ E +YVPELIFG LL
Sbjct: 136 EILVNAADNKQRDPKMNLIKVNINKEENEISIYNNGRGIPVVLHKIEKLYVPELIFGTLL 195

Query: 145 TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
           TSSNYDD+ +K TGGRNGYGAKL NIFS EF +ET+  +  K +KQ + NNM K  EP I
Sbjct: 196 TSSNYDDSERKVTGGRNGYGAKLCNIFSKEFTLETSTNEYEKAFKQTWVNNMSKGEEPKI 255

Query: 205 SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
           +  K  D +T+V+FKPDLAKF MT L+DD+VALM +R  D+AG   + VKV LN  ++PV
Sbjct: 256 TTSKRED-FTRVTFKPDLAKFKMTKLDDDIVALMCRRAYDIAGST-RGVKVFLNNKQIPV 313

Query: 265 KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
           + F +YV+ Y K        +    +E V+ RWE+ +T+S+  FQQVSF N IAT KGG 
Sbjct: 314 QGFKQYVEQYVKHNVDNNGEAYKVVYESVSPRWEVALTISDKGFQQVSFANSIATTKGGR 373

Query: 317 HVDYVANQVANHVMAVVNK---KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
           HVDYV +Q+A+ ++ V+ K   K+   NVK   +KNH+W+FVNALI+NP FDSQTKET+T
Sbjct: 374 HVDYVVDQIASKLIDVIKKKIGKSGGINVKPFQIKNHMWIFVNALIENPTFDSQTKETMT 433

Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKL 432
           L+  SFGS CELSE+F+ +   K GIVE +++W  FKQ + L KK    KT  ++G+ KL
Sbjct: 434 LQSKSFGSTCELSEKFI-QAALKCGIVEAIMAWVRFKQQETLDKKCSSKKTSKLKGVPKL 492

Query: 433 EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
           EDAN AG +NS QCTLILTEGDSAK+LA++GL VVGRD++GVFPLRGK+LNVRE +  QV
Sbjct: 493 EDANDAGTKNSAQCTLILTEGDSAKSLAVSGLGVVGRDKYGVFPLRGKMLNVREGNHKQV 552

Query: 493 LN 494
           ++
Sbjct: 553 ID 554


>gi|15078758|ref|NP_149508.1| 045L [Invertebrate iridescent virus 6]
 gi|82039172|sp|Q9QSK1.1|TOP2_IIV6 RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|5725647|gb|AAD48151.1|AF083915_5 045L [Invertebrate iridescent virus 6]
          Length = 1132

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 389/1212 (32%), Positives = 616/1212 (50%), Gaps = 156/1212 (12%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y   S ++H+LLRP+  IGS     Q  ++ +E    ++ + +     L +IF E+L NA
Sbjct: 10   YTTLSDIDHVLLRPEVIIGSTVPMEQTEYVVDENFSEILEKQVFVSEALIRIFVEVLANA 69

Query: 91   ADNKQRD----PKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEG---------VYVPE 137
             DN  R         ++K+ I+ +   + +HN G  + +   + +G         VY  E
Sbjct: 70   VDNIHRSKGSSTPCKSIKIKIEDDGTTM-IHNDGQVIKISKEENDGIEINGKKCSVYNHE 128

Query: 138  LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
            L+FGHL +SSNYDD V + T G+NG G K TNI S  F +   D +  KK+ Q +TNNM 
Sbjct: 129  LVFGHLRSSSNYDDTVVRQTSGKNGLGVKCTNILSKSFKVIGVDPENKKKFVQEWTNNMK 188

Query: 198  KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLG-KSVKVE 256
            + S P ++       +T+V + PD  +  + +   D++ + +K V+D+A     + V V 
Sbjct: 189  ETSGPKVTTSSSKTGYTEVIYCPDFER--LGNFSSDIIGIFRKHVLDVAMLASSEGVSVY 246

Query: 257  LNGHRVPVKSFAEYVDMYP---KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIK 313
             N  ++P+K F++Y  ++    +S++   E  +    I     +G+ + +SFVNG+ T  
Sbjct: 247  FNDKKLPIKKFSDYTKLFKLEKESISITEEDGSSEVTIAFVERDGKKKPISFVNGLFTKH 306

Query: 314  GGTHVDYVANQVANHVMAVVNKKNK---NANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
            GG HVD        ++++V+NK +K   +  +   +V  +   FV + +D P FD Q K 
Sbjct: 307  GGQHVDGWTKPFFANLLSVLNKPSKTYKDLKLSLKDVTPYFRFFVKSTVDKPQFDCQNKN 366

Query: 371  TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR--- 427
             L     S   K  + ++ + KV   + + E  L  ++F++    K N+  KT + +   
Sbjct: 367  ML----KSPCLKYTIPDKIITKVCKWTSVQE--LKQSSFEKLLKGKDNNIIKTLNDKKRR 420

Query: 428  ---GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSV----------VGRDRFGV 474
                + + + AN AG   SE+CTLI+ EG SAK  A+AG+S            GRD FG+
Sbjct: 421  PKVSVKEYDPANKAGTTLSEKCTLIVCEGLSAKTYAVAGISTGISFTGTDTKKGRDWFGI 480

Query: 475  FPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQV 531
             PLRGK LNVR A++++++ N+ + ++   +GL  G++Y+   + KSL YG ++I+ D  
Sbjct: 481  LPLRGKFLNVRNANNDKMIKNTVVTDLVNAMGLTFGMDYSTQKSRKSLNYGSIIIIPDP- 539

Query: 532  LLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK--IPS---- 585
                                       D DG HI+GL++NF H  + SL    +P+    
Sbjct: 540  ---------------------------DEDGIHIEGLVLNFFHHHFSSLFNPVVPNLKDF 572

Query: 586  -FLVEFITPIVKATNK---NGKVLSFYSMPDYEAWKESLGGNASSWS----IKYYKGLGT 637
             F+     PI+K   K     + + F++   +  +K     N + W     IKY+KGLGT
Sbjct: 573  PFISSMKIPIIKVIEKPLKGRREIEFFTHEAFHKFK-----NENKWHKNHEIKYFKGLGT 627

Query: 638  STSKEGKEYFQNITLHKKDFVWE-DDQDGEAIELAFSKKKIEARKKWLLQFEPGNH---L 693
            +  ++  + F      KK  V+  DD   E +E AF  ++ + RK+WL Q+ P      L
Sbjct: 628  TKHEDVPKIFG-----KKMVVFNIDDNAHENMEKAFKDEEADERKEWLKQYNPNARTFDL 682

Query: 694  DQKEKYIKY--SDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKV 751
            D   K ++   S F+N+ELI FS+ D +RS+P ++DGLK  QRK++F   + N     KV
Sbjct: 683  DSPNKILQLNISTFINEELIKFSIEDCKRSLPHLIDGLKESQRKVIFGLKQWNGKNNIKV 742

Query: 752  AQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASAR 811
            AQ   +V++ + Y HGEQ+L  TI+ MAQ FVG+NNI LL+ +GQFGTR  GGKDAAS R
Sbjct: 743  AQLGAFVAQKTDYKHGEQNLFDTIIKMAQTFVGANNIPLLEEDGQFGTRLSGGKDAASPR 802

Query: 812  YIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYI 871
            YIF    PI   +F  +DD +L+Y   DG   EP +Y P+IP + +NGS G+GTG+S  I
Sbjct: 803  YIFVNQPPILNKIFRPEDDPILNY-TLDG---EPVFYAPVIPLICINGSVGVGTGFSCNI 858

Query: 872  PNYNPRDIVANVRRLLN----GE-MMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
            P +NP +I+  +++ +N    GE  +    PWY+GF G IEK  S       T++     
Sbjct: 859  PMFNPSEIIDGLKQWINMREQGEKYVFKYKPWYKGFTGKIEKNGSGRYISYGTLSNEASN 918

Query: 927  VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
                   + ELPI  WT  ++E  +   + N   I+    YS+ TTV+F++         
Sbjct: 919  NGMYQYTVSELPINMWTDKFKEMCDQYRESN--LIKTCDNYSEVTTVNFKI--------S 968

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
            ++ E  ++  KL + I TSNM +FD +G I KY+T   I++ F   R++ YEKR++  L+
Sbjct: 969  SEHELTIENLKLRSYIHTSNMVMFDHEGKIHKYETLNGIMQRFCKERIKIYEKRRQYMLQ 1028

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
             L   L   ENK RF+  V+N +I +       LL E                E V    
Sbjct: 1029 KLNKSLTISENKKRFMEDVMNQKIKI-------LLQE---------------DEVVHQQL 1066

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
             D     ++  E         +DYLL+M IG    + V  L++  D L +++        
Sbjct: 1067 LDMNYYKDDEGE---------FDYLLNMNIGGFRKKNVDKLISKIDDLKKDIMWYTNTNE 1117

Query: 1167 ESLWVKDLDALD 1178
              +W+KD+  L+
Sbjct: 1118 GQMWLKDILELE 1129


>gi|10121863|gb|AAG13404.1|AF285158_1 topoisomerase II alpha-3 [Homo sapiens]
          Length = 536

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 284/512 (55%), Positives = 360/512 (70%), Gaps = 50/512 (9%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29  SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88  ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
           K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207 KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIAT------ 311
            F  YVDMY K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT      
Sbjct: 266 GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKSSKY 325

Query: 312 ------------------------------IKGGTHVDYVANQVANHVMAVVNKKNKNA- 340
                                          KGG HVDYVA+Q+   ++ VV KKNK   
Sbjct: 326 WSSRKSKQHILLNFFVLFKFINDAFFGICPFKGGRHVDYVADQIVTKLVDVVKKKNKGGV 385

Query: 341 NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIV 400
            VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+  SFGS C+LSE+F+K      GIV
Sbjct: 386 AVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQPKSFGSTCQLSEKFIKAAIG-CGIV 444

Query: 401 ETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKAL 459
           E++L+W  FK    L KK    K   ++GI KL+DAN AGGRNS +CTLILTEGDSAK L
Sbjct: 445 ESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDANDAGGRNSTECTLILTEGDSAKTL 504

Query: 460 AMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
           A++GL VVGRD++GVFPLRGK+LNVREAS  Q
Sbjct: 505 AVSGLGVVGRDKYGVFPLRGKILNVREASHKQ 536


>gi|299741517|ref|XP_001834519.2| DNA topoisomerase II [Coprinopsis cinerea okayama7#130]
 gi|298404747|gb|EAU87295.2| DNA topoisomerase II [Coprinopsis cinerea okayama7#130]
          Length = 966

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 296/595 (49%), Positives = 376/595 (63%), Gaps = 88/595 (14%)

Query: 367 QTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV 426
           QTKE LTL  S FGSK  +S+EF+KKV A SGIV+ +L+WA FK  + +K+ DGTK   +
Sbjct: 404 QTKELLTLPSSKFGSKPTISDEFIKKV-AHSGIVDNVLNWAKFKADQQMKRADGTKRSRL 462

Query: 427 RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
            G++KL DAN AG R+++ CTLILTEGDSAKALA+AGL VVGRD FGVFPLRGKLLNVRE
Sbjct: 463 LGLAKLSDANNAGTRHAQDCTLILTEGDSAKALAIAGLGVVGRDNFGVFPLRGKLLNVRE 522

Query: 487 ASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIF 546
           A  +QV+ N EI NIKKI+GL+   +Y N  SLRYG +MIMTDQ                
Sbjct: 523 ACHDQVMKNEEIQNIKKIMGLQHNKDYTNTSSLRYGRVMIMTDQ---------------- 566

Query: 547 AWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS 606
                       DHDGSHIKGL+INF+   +PSLLKIP FLVEF+TP+     K  KV  
Sbjct: 567 ------------DHDGSHIKGLIINFLDHLYPSLLKIPDFLVEFVTPLSGYVKKGNKVKD 614

Query: 607 FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
           F+++P+YE W E    +A  W  KYYKG   S  K  +EYF  +   +K F     + G 
Sbjct: 615 FFTIPEYEQWLEETP-DARKWESKYYKGF--SEDKGAREYFSKM---EKRFHLHRRKKGT 668

Query: 667 A-IELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSM 725
             I+LAFSKKK + RK+WL Q++PG  LD + + I YS+F+NKELILFSMA+  RSIPS+
Sbjct: 669 VNIDLAFSKKKADERKEWLRQYKPGTFLDHRLEEIPYSEFINKELILFSMANNVRSIPSI 728

Query: 726 VDGLKPGQRKILFCSFKRNFIKEAKVAQFS----GYVSEHSAYHHGEQSLASTILGMAQD 781
             GLKPGQRK+++  FKR   KE KV  F+    GY+SEH+AYHHGE SLA+TI+ +AQD
Sbjct: 729 AYGLKPGQRKVIWGCFKRKLKKEIKVEIFARSSNGYISEHAAYHHGEASLAATIINLAQD 788

Query: 782 FVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQ 841
           FVGSNN+ LL P+                                      LD    D  
Sbjct: 789 FVGSNNLALLSPS--------------------------------------LD----DDV 806

Query: 842 QIEPTWYMPIIPTVLVNGSEGIGTG--WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
            IEP W+MP +P VL+NG+EGIGTG    + IP YNP DIVAN+RR + GE +EPM PW+
Sbjct: 807 PIEPEWHMPTVPMVLINGAEGIGTGSRLDTNIPPYNPIDIVANIRRKMKGEELEPMTPWW 866

Query: 900 RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII 954
           RGF G +      +    Y V G+  ++N+TT+ I ELPI +WT+ +++ LE +I
Sbjct: 867 RGFKGEVRPPGKGK----YDVVGVATKINDTTVEISELPIHKWTRTFKDDLEVMI 917



 Score =  276 bits (705), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 130/243 (53%), Positives = 176/243 (72%), Gaps = 1/243 (0%)

Query: 20  PTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGL 79
           PT+  +  EE  +  +QLEHIL RPD+YIG+IE  +  +W Y+ E+  M+HR + YVPG 
Sbjct: 145 PTSAARRQEEPDEPLTQLEHILKRPDSYIGNIEIISTPMWTYDSETIRMVHREVKYVPGF 204

Query: 80  YKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELI 139
           +KI DEILVNAADNK  DP MD +K+ ID E   ISV+N+G G+P+EIH +E +Y+PE+I
Sbjct: 205 FKIVDEILVNAADNKINDPSMDTLKITIDVEEGTISVYNNGRGIPIEIHSKEKMYIPEMI 264

Query: 140 FGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
           FGHLLTS+NYDD+ KK TGGRNGYGAKL NI+S EF +ETAD    +KYKQ +T+NM K 
Sbjct: 265 FGHLLTSTNYDDDEKKLTGGRNGYGAKLANIYSLEFTVETADKNTSQKYKQTWTDNMSKC 324

Query: 200 SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
            +  I+K   G+ +T+++F+PDL +F M  + +D V L+K+RV D+A  + K VKV LN 
Sbjct: 325 GKAKITKNTRGEEYTRITFRPDLKRFGMNSINEDTVNLLKRRVFDMADTV-KDVKVLLND 383

Query: 260 HRV 262
            R+
Sbjct: 384 ERL 386


>gi|339906076|ref|YP_004732873.1| hypothetical protein WIV_gp090 [Wiseana iridescent virus]
 gi|308051947|gb|ADO00434.1| hypothetical protein [Wiseana iridescent virus]
          Length = 1135

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 384/1214 (31%), Positives = 608/1214 (50%), Gaps = 158/1214 (13%)

Query: 31   YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
            Y  K+ ++H+L   D YIG      +  +++E  +  ++ + +     L +IF E L NA
Sbjct: 13   YSIKNDIQHVLDCSDVYIGDTSSTLRKEYVWEGVTNKIVSKGVKTPEALIRIFVEALTNA 72

Query: 91   ADNKQRDPK----MDAVKVVIDQEHDLISVHNSGDGVPV-EIHQEEG------------- 132
             DN +R         A+K+ ++ E  L S+ N G  +P+ +   +EG             
Sbjct: 73   VDNVERSKNTSMACKAIKINLNLESGLTSIWNDGQVIPIIQNKNQEGSSDEDLQLLSKAD 132

Query: 133  ---------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGK 183
                     +Y+  LIFGHL +SSNY +   +   G+NG G K TNIFS+ F +   D +
Sbjct: 133  KINLKKLNELYIHSLIFGHLRSSSNYSNEEVREVSGKNGVGVKCTNIFSSYFCVTGVDPE 192

Query: 184  RLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVV 243
               K  Q + NNM   S P ISKC     +T+V + PD  +FN++    +V ++ KK  +
Sbjct: 193  NKLKLIQEWKNNMTTSSGPVISKCSSSRGYTEVKYIPDFKRFNLSKYPLEVSSIFKKLAI 252

Query: 244  DLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERV--NERWEICVTLSEGQFQ 301
            D++  L + + +  NG ++ +K+   Y  +Y     R++      +  E+ V  SE    
Sbjct: 253  DVSSLLPE-INIYFNGEKLGIKNLKVYSQLYYPDDERYNSLTIKYKGSEVVVVGSEIGLP 311

Query: 302  QVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK-KNKNANVKAHNVKNHLWVFVNALID 360
             +SFVNG  T  GG HV      V   ++  +NK K     +   ++  +   F+++ ++
Sbjct: 312  PISFVNGQITKDGGQHVQSWTKTVFTQLLESLNKSKGDKIKLTKGDISPYFQFFIHSRVN 371

Query: 361  NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKND- 419
             P FD Q K  L  +     S  E S+  L K+     I          K+   LKK + 
Sbjct: 372  KPKFDGQNKNVL--KNPKVESSLEKSQ--LTKILKWPVITIIKEKVLRSKELLALKKIEL 427

Query: 420  GT-KTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSV-----VGRDRFG 473
            GT K + +  +   + AN  G     +  LI+ EG SAK+ A+AG+        GR+ FG
Sbjct: 428  GTSKRKIIPKVDGYDPANTLG----VESILIVCEGLSAKSYAVAGIQTGIFGKKGRNHFG 483

Query: 474  VFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQ 530
            + PLRGK LNV+  S  +V  N  + ++ K+  LK  ++Y+   N K+L YG L+I+TD 
Sbjct: 484  ILPLRGKFLNVKNVSLTKVGANKVVNDLIKVFNLKFNLDYSLPQNYKTLNYGTLLILTDA 543

Query: 531  VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
                                        D DG HIKGL++NF+H  +P+L+K+  F++  
Sbjct: 544  ----------------------------DKDGIHIKGLILNFLHELFPTLIKLKGFVISM 575

Query: 591  ITPIVKATNKNGKV-LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
             TPIVK   K GK  L FY    +E  +   G      + KYYKGLGT  SK+  ++F  
Sbjct: 576  ETPIVKIFQKKGKDDLLFYDENTFERLRSEEG---KILNFKYYKGLGTINSKDVPQFFGK 632

Query: 650  ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPG---NHLDQ----KEKY--- 699
              +        D +  E I   F  +    RK WL  F P      LD     KEK    
Sbjct: 633  KLVKYT----HDSKCEEVINKVFKDENANDRKVWLNNFNPKVSKYCLDTLPELKEKRDGQ 688

Query: 700  ------IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR--NFIKEAKV 751
                  +K SDF+  E+I FS  D +RS+ S +DGLK  QRK+++   K+  N     KV
Sbjct: 689  NVKLINVKISDFMENEMIKFSYEDCKRSLGSCIDGLKESQRKVIYALRKKFKNKTDFIKV 748

Query: 752  AQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASAR 811
            AQ SGY++E + Y HGEQ+L  TI+  AQDFVG+NNI LL+P+GQFGTR +GGKD+A++R
Sbjct: 749  AQLSGYIAEQTDYKHGEQNLCETIIKFAQDFVGTNNITLLEPDGQFGTRLEGGKDSAASR 808

Query: 812  YIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYI 871
            YI+T+   I +++F ++DD +L +  E     EPT ++P++P +L+NGS GIGTGWS +I
Sbjct: 809  YIYTKPHKILKYIFREEDDPILTFTPEG----EPTTFVPVVPLILINGSIGIGTGWSCFI 864

Query: 872  PNYNPRDIVANVRRLLNGEM----MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEV 927
            P YNP +++      L GE     +E ++P+YR F G I++  S++  + +T  G ++ +
Sbjct: 865  PQYNPLELIDITISKLMGEFSPIQLENLNPYYRNFKGKIKENTSEK--LKFTTYGKMKRI 922

Query: 928  NETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRT 987
            +E T+++ ELPI  WT  ++++  S+I++         Q  +++T++ EV  + + +  T
Sbjct: 923  DERTIQVTELPIGMWTDKFKDYCYSLIEKG-----VMSQLINESTIN-EVNFTLKDLEDT 976

Query: 988  KQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLEN 1047
                     KLT+++ T+NM LF+ K VI KY T   I EE+F  RL +Y+ RKK  L  
Sbjct: 977  SA------IKLTSSLHTTNMVLFNCKDVITKYQTIGDIFEEYFKTRLHYYDLRKKYLLSK 1030

Query: 1048 LELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGAT 1107
            L  ++   EN++ FI  VV  +  +     T ++ EL  + F                  
Sbjct: 1031 LRDDISLNENRLNFIFKVVQIDNFLKQEDET-IINELENENFL---------------KV 1074

Query: 1108 DETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPE 1167
            D T                 ++YLL++ +   T   +  L +   KL +E+ +L + + +
Sbjct: 1075 DNT-----------------FNYLLNIPVRGCTTTAIAFLQSTISKLQQELINLEELSIQ 1117

Query: 1168 SLWVKDLDALDMQL 1181
             +W+K+L  +  QL
Sbjct: 1118 QMWLKELKEVKNQL 1131


>gi|62087338|dbj|BAD92116.1| DNA topoisomerase II, beta isozyme variant [Homo sapiens]
          Length = 1009

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 283/589 (48%), Positives = 387/589 (65%), Gaps = 24/589 (4%)

Query: 623  NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
            N  +W IKYYKGLGTST+KE KEYF ++  H+  F +   +D  AI LAFSKKKI+ RK+
Sbjct: 8    NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKE 67

Query: 683  WLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLK 730
            WL  F            P   L     K++ Y+DF+NKELILFS +D +RSIPS+VDG K
Sbjct: 68   WLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFK 127

Query: 731  PGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            PGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ+FVGSNNINL
Sbjct: 128  PGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINL 187

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            LQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D Q++EP WY+P
Sbjct: 188  LQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDDNQRVEPEWYIP 247

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTA 910
            IIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+ F GTI++  
Sbjct: 248  IIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYKNFKGTIQELG 307

Query: 911  SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQNDSFIRGFRQ 966
              +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+  + I  +++
Sbjct: 308  QNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDKTPALISDYKE 363

Query: 967  YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
            Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +KKY+T + IL
Sbjct: 364  YHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYETVQDIL 423

Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
            +EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR + DL+  L Q
Sbjct: 424  KEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLIQMLVQ 483

Query: 1087 KGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMAIGTLTLEKVQ 1145
            +G+   P  +       A   DET+   ++    +G  S  D++Y+L+M++ +LT EKV+
Sbjct: 484  RGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNMSLWSLTKEKVE 543

Query: 1146 GLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
             L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +++  E+
Sbjct: 544  ELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVESQERED 589


>gi|397644699|gb|EJK76510.1| hypothetical protein THAOC_01723 [Thalassiosira oceanica]
          Length = 771

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 325/827 (39%), Positives = 461/827 (55%), Gaps = 112/827 (13%)

Query: 398  GIVETLLSWANFKQSKDLKK-------NDGTKTEDVRGISKLEDANLAGGRNSEQCTLIL 450
            GIVE +L  A   Q  ++ K       +D      V  I KLEDANLAG ++   C LIL
Sbjct: 16   GIVEEVLRLAVGNQKVNMAKLLRGVGASDKQTKRQVLSIPKLEDANLAGTKHGSDCALIL 75

Query: 451  TEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQG 510
            TEGDSAKALA+AGL V+                    + +++  N+E+  I  ILGL+  
Sbjct: 76   TEGDSAKALAVAGLEVIN------------------VTVSKMAKNAELKAICSILGLQFE 117

Query: 511  VEYNNVKS---LRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKG 567
              Y   +    LRYGH+M+MTDQ                            D DGSHIKG
Sbjct: 118  KSYRTKEERDELRYGHVMLMTDQ----------------------------DADGSHIKG 149

Query: 568  LLINFIHSFWPSLLKIPS---------FLVEFITPIVKATNKN--GKVLSFYSMPDYEAW 616
            L++N    FWP LLK P          F+  F+TP++KAT K   G+  SF+SM DY+ W
Sbjct: 150  LIMNLFRHFWPELLK-PCLDGGQPERPFMSMFVTPLLKATRKGKKGETRSFFSMADYDRW 208

Query: 617  KESLGGN-ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKK 675
            ++ L  +    +S+KYYKGLGTST  E KEYF +   H + F WE++ DGE+I++AF K 
Sbjct: 209  RKELDDDDIKKYSVKYYKGLGTSTPAEAKEYFLSFIQHYRPFRWEEN-DGESIDMAFEKT 267

Query: 676  KIEARKKWLLQF---EPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
            + + RK+W+L     +   ++D+ +  + Y +FV+ ELI FS A+  R++PS++DGLKP 
Sbjct: 268  RADDRKEWILNVYDEKSTINVDEIDGSVTYGNFVDNELIHFSNANNIRALPSVIDGLKPS 327

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRKIL   FKRN   E KVAQ +GY +EH+AYHHGE SL +TI  MAQ+FVGSNNINLL 
Sbjct: 328  QRKILHACFKRNLKDEIKVAQLAGYCAEHTAYHHGEASLHATITSMAQNFVGSNNINLLL 387

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P GQFGTR  GG DAAS RYIFT                   +L +DG  IEP ++ P+I
Sbjct: 388  PIGQFGTRLMGGDDAASPRYIFT-------------------HLEDDGLSIEPEFFCPVI 428

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN--GEMMEPMHPWYRGFGGTIEKTA 910
            P +LVNG++GIGTGWS+YIP +NP D++  +R  LN   E    + PW +GF G I    
Sbjct: 429  PLLLVNGAQGIGTGWSTYIPQHNPLDVLNYIRTKLNEKDENEFSIMPWVKGFAGRIADDP 488

Query: 911  SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDD 970
            S     +Y   G+IE  +++T+ I ELP+  WT DY+  L  ++ + +  IR F +    
Sbjct: 489  SNSG--SYITEGLIEPTSQSTVSITELPVGVWTNDYKATLLKMMSKGE--IRSFTENHTT 544

Query: 971  TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFF 1030
            T+V F+V +S   + R  + GL  KFKL   +S  NM+ F     IK ++TPE I + FF
Sbjct: 545  TSVSFDVKVSTSKLARFIKGGLHSKFKLRNKLSKRNMNAFCPNMDIKLFETPEDIADAFF 604

Query: 1031 HIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI--VVNNRKRTDLLLELRQKG 1088
             +RL  Y  RK V   N+E     + NK RFI  V   ++  +     + + L  L++  
Sbjct: 605  RVRLALYVDRKSVLESNMEHAAALMRNKARFIEAVSTNQVDLLRGRSSKENALHFLKELK 664

Query: 1089 FTPFP-----KNSKSIE---AVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLT 1140
            FTP       K++ ++E   A+ + A ++  + E +P  V+ ++  +YDYLL+M + +LT
Sbjct: 665  FTPASELAKIKSNNTVERRRAISSPAREDDGKEESSP--VDIMK--EYDYLLNMPLSSLT 720

Query: 1141 LEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKS 1187
             E++  L  D  K + ++ D+++ T   LW +DLD L+  L   D S
Sbjct: 721  TERIDALNEDASKTDAKLADIQQTTAADLWHEDLDRLESHLKSGDGS 767


>gi|297794799|ref|XP_002865284.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311119|gb|EFH41543.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 267/409 (65%), Positives = 318/409 (77%), Gaps = 32/409 (7%)

Query: 6   RLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES 65
           +LP+   +NANV    A +     +    + +EHILL PD+YIGSIEKHTQ LW+YE+E 
Sbjct: 4   KLPMQNIDNANVAKAPASS-----LASAGNTIEHILLCPDSYIGSIEKHTQTLWVYEKEE 58

Query: 66  KTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPV 125
             M+ R+++YVPGLYKIFDEILVNAADNK+RDP MD+VKVVID E + ISV NSGDGVP+
Sbjct: 59  --MVCRSVTYVPGLYKIFDEILVNAADNKRRDPSMDSVKVVIDVEKNQISVCNSGDGVPL 116

Query: 126 EIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR- 184
           E    EGV+VP + FGH L   NYD+NVKKTTG RNG+GA LTNIFSTEFIIE ADGKR 
Sbjct: 117 E----EGVFVPGIFFGHWL-RRNYDNNVKKTTGRRNGFGATLTNIFSTEFIIEIADGKRS 171

Query: 185 LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
           LKKYKQVF NNMG  S+  I+KC +G+NWTKV+FKPDL KFNMT LE+DVVALM KRV D
Sbjct: 172 LKKYKQVFENNMGNMSKLFITKCNKGENWTKVTFKPDLKKFNMTELENDVVALMSKRVFD 231

Query: 245 LAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVT--------RFHERVNERWEICVTLS 296
           +AGCLG++VKV+LNG RVP+KSF++YVD+Y  + +        R +E+VN+RWE+CV   
Sbjct: 232 IAGCLGQTVKVDLNGKRVPIKSFSDYVDLYLSAASKSRTEPLPRMNEKVNDRWEVCV--- 288

Query: 297 EGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVN 356
                  SFVN IATIKGGTHVDYV +QV  +++ +VNKK K  NVK HNVKNHLWVFVN
Sbjct: 289 -------SFVNSIATIKGGTHVDYVTSQVTEYIVGIVNKKKKYPNVKTHNVKNHLWVFVN 341

Query: 357 ALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLS 405
           ALIDNPAFDSQTKETLTL + SFGSKC+LSE  L+KV AKSG+VE LLS
Sbjct: 342 ALIDNPAFDSQTKETLTLPERSFGSKCQLSENILQKV-AKSGVVENLLS 389



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 94/171 (54%), Gaps = 50/171 (29%)

Query: 1032 IRLEFYEKRKK-------VQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            + LE+YEK+K+       + L+N ELELLKLE              + N++K       L
Sbjct: 405  LTLEYYEKKKETMLKNQEIMLKNRELELLKLE--------------IANDQK-------L 443

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            R+K FT   +N+K +EA VAGAT+  E S              Y+YLL +++  L  + V
Sbjct: 444  REKWFTEILENAKPVEAAVAGATNAAESSY-------------YNYLLQLSV--LITDTV 488

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEER 1195
            Q + A RD++ + V+DL+ ATPESL +K       +L+ELDK DA+ +EER
Sbjct: 489  QEVRAQRDQMMDAVEDLKNATPESLRLK-------ELEELDKQDAQPDEER 532



 Score = 47.0 bits (110), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 3/49 (6%)

Query: 1400 SPEKKVRKMRASPFNKKSGSMLGRAGTIEEPS---GSSPSTSEEVAEVL 1445
            SPEKKVRK+R+SPFNKKS S++ R    EE S    +  S+SE+  +V 
Sbjct: 579  SPEKKVRKLRSSPFNKKSSSVMSRLANKEEESSENAAGNSSSEKSGDVF 627


>gi|109287964|ref|YP_654658.1| hypothetical protein MIV086L [Invertebrate iridescent virus 3]
 gi|123862744|sp|Q196X4.1|TOP2_IIV3 RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|106073587|gb|ABF82116.1| hypothetical protein MIV086L [Aedes taeniorhynchus iridescent virus]
          Length = 1113

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 381/1206 (31%), Positives = 587/1206 (48%), Gaps = 163/1206 (13%)

Query: 28   EEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEIL 87
             + Y  K+ ++H+L   D YIG      ++ W++++    ++ R  +    L +IF E+L
Sbjct: 6    HQKYTIKNDIQHVLDCSDVYIGDTAPTARSEWMFDDAVNQIVWRPTTTPEALVRIFVEVL 65

Query: 88   VNAADNKQRDPK-----MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGV--------- 133
             NA DN +R           +KV +D +    SV N G  +PV  + + GV         
Sbjct: 66   TNAVDNIERSINGGHELCKNIKVDVDLKTGKTSVWNDGQVIPVVKNCDNGVVQPPPPTTE 125

Query: 134  ------------YVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 181
                        Y+  +IFGH  TSSNYD+   + +G +NG G K TNIFS+ F +   D
Sbjct: 126  QDRLAYEKLNREYIHTIIFGHFRTSSNYDNETDQVSG-KNGVGVKCTNIFSSWFSVVGVD 184

Query: 182  GKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKR 241
              R  K+ Q + +NM K   P + KC     +T V + PD A+F +    +DV ++ KK 
Sbjct: 185  PDRKLKFSQEWRSNMTKSGAPQVVKCALKTGYTLVEYVPDFARFKLKSYPEDVESIFKKL 244

Query: 242  VVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNERWE---ICVTLSEG 298
            VVD A     +     NG R  VK+   Y  +Y        + V   ++   + V  S  
Sbjct: 245  VVD-ASAFFPNTAFFFNGERTVVKNAVAYAKLYYNLNETAVDSVVIDYKDSKVVVVGSAT 303

Query: 299  QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNAL 358
                VSFVNG  T  GG HV   +  +   ++A +N K KN ++   ++  +  +F+++ 
Sbjct: 304  PLPPVSFVNGQITPAGGQHVTNWSRVIFGALLAALNGK-KNVSLTKADIAPYFQLFIHSK 362

Query: 359  IDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLS-WANFKQSKDLKK 417
            +  P FD Q K  L     S   +  L    LKK+  K  I+ T+       K+   LKK
Sbjct: 363  VSKPKFDGQNKNCL----KSPKVEAHLDATILKKML-KWKIISTIQDKVVKSKEYLALKK 417

Query: 418  NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGL-----SVVGRDRF 472
             +  +T  V+ +   + AN  G        LI+ EG SAK+ A+AG+     +  GR  F
Sbjct: 418  IECRRTPIVK-VDGYDQANRLG----PDSVLIVCEGLSAKSYAVAGIQKGLFNKKGRTYF 472

Query: 473  GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTD 529
            G+ PLRGK LNV+  +  ++  N  + +  K+L LK  ++Y    N  +L YG L+I+TD
Sbjct: 473  GILPLRGKFLNVKNTTPLKIGQNKVVSDFIKVLNLKFNLDYRKATNYATLNYGTLLILTD 532

Query: 530  QVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVE 589
                                         D DG HIKGL++N IH  +P+L     F+  
Sbjct: 533  A----------------------------DKDGIHIKGLILNLIHELFPTLFHRQGFIYS 564

Query: 590  FITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
              TPIVK  +K G+   FY    +E W+     +      KYYKGLGT    +   +F +
Sbjct: 565  METPIVKILHKKGQPTLFYDENSFEDWRAQ---HPELKHFKYYKGLGTIGPADVAAFFGS 621

Query: 650  ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPG------NHLDQKEKYIKYS 703
              +        D+    A+   F  +    RK+WL +F P       +H  +    +K S
Sbjct: 622  KVVRYH----YDEATDAAVNSVFKDENANERKEWLGRFNPRVSQWCLDHHREAVIDLKIS 677

Query: 704  DFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFC---SFKRNFIKEAKVAQFSGYVSE 760
            DF++ E+I FS  D +RS+ S +DG K  QRKI++     F+ N  +  KVAQ SGYV+E
Sbjct: 678  DFMHHEMIKFSYEDCRRSLASCIDGFKESQRKIIYAVRKKFRSNSTEFIKVAQLSGYVAE 737

Query: 761  HSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPI 820
             + Y HGEQ+L  TI+  AQDFVG+NN+ LL+P+GQFGTR +GGKD+A+ RYI+T+   I
Sbjct: 738  QTDYKHGEQNLCETIVKFAQDFVGANNVQLLEPDGQFGTRLEGGKDSAAPRYIYTKPHKI 797

Query: 821  TRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIV 880
              ++F ++DD +L    E   + EP  ++PIIP VLVNGS GIGTGWS ++P YNP +++
Sbjct: 798  LPYIFREEDDPIL----EQSSEGEPVHFVPIIPLVLVNGSVGIGTGWSCFVPQYNPLELI 853

Query: 881  ANVRRLL---NGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKEL 937
              +   L   + E + P  PWYR F G +  T   +    +T  G +++V+  T+R+ EL
Sbjct: 854  RYIEARLTSQDSEALLPAKPWYRNFTGKVAATGPGK----FTTFGRMKQVDADTVRVTEL 909

Query: 938  PIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFK 997
            P+  WT  +++   S+I+         +Q  +++TV             +K +  LKK +
Sbjct: 910  PVGMWTDRFKDQCYSLIESGQ-----LQQLVNESTV-------------SKVDFTLKKLQ 951

Query: 998  ------LTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
                  LTTT+ T+NM LFD + VI KYDT   IL+ +F  RL FY+ RK   +  L+  
Sbjct: 952  DISALKLTTTLHTTNMVLFDRENVITKYDTIGDILDHYFQTRLAFYKVRKNHTIAQLKNT 1011

Query: 1052 LLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETE 1111
            +   E K++FI  V+                 LRQ        +  +I +++        
Sbjct: 1012 IQHNETKLKFIEKVLTDHSF------------LRQ--------DDAAIVSIL-------- 1043

Query: 1112 ESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWV 1171
            E E   +V N      Y+YLL+++I + T   V+ L +    L E +  +++     +W 
Sbjct: 1044 EKENFLKVDNS-----YNYLLNISIRSCTATAVEKLQSTIKGLTESLIRVQQTPTRQMWY 1098

Query: 1172 KDLDAL 1177
             +L  L
Sbjct: 1099 DELQQL 1104


>gi|347481998|gb|AEO97984.1| topoisomerase II [Emiliania huxleyi virus 84]
          Length = 1103

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 364/1170 (31%), Positives = 581/1170 (49%), Gaps = 112/1170 (9%)

Query: 32   QKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI---HRTISYVPGLYKIFDEILV 88
            Q  +Q +HIL RP  Y+G +E        Y +E  TM    H     VP L KI +E L 
Sbjct: 7    QVLTQHDHILARPGMYVGGVEPVE-----YNKEVMTMTGPKHVKEMMVPALLKIIEEPLA 61

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NA+D  Q +P    +KV  DQ    I +  +   V +E   +   Y   L     +T +N
Sbjct: 62   NASDASQNNPVAKNIKVTTDQRDSSIKIETNTKFV-IEYVPDGNDYSVALAVSRFMTGTN 120

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            + D+ +    G++G G KLTN+FS  F +   D    + Y  ++TNNM    +  + K  
Sbjct: 121  FGDDDESFKLGQHGLGIKLTNVFSKYFEVVVHDPSTKQSYHGIWTNNMYTVEKSVVKKAS 180

Query: 209  EGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSF 267
                +  ++F PDL  F +   L      ++  +V DLA    K   V LNG ++P K  
Sbjct: 181  HKTPYVSITFIPDLPYFGLRGPLTAGQWDIIHSQVFDLAVTAPKHTTVHLNGEKIPFKGI 240

Query: 268  AEYV-----DMYPK-SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
              Y+     D   K  + +       R E+ VT++    + + +VNG  T +G  H DY+
Sbjct: 241  KGYIQAVMGDSLDKICMDKVEVNGTVRLEVAVTIARDHAESIVYVNGAHTTRGTIH-DYI 299

Query: 322  ANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS 381
               +AN +       +K  N+    ++  L +   A I N  F SQ KE L    S +G 
Sbjct: 300  FKNIANAL-------SKKHNINPSMLRGLLLIVAEAWIPNARFTSQAKEELYTPVSKYGF 352

Query: 382  KCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGR 441
            K +LS+ F+K + AK+ +  ++++  + K  K  +K+       +   +K + A      
Sbjct: 353  KWDLSQSFIKSL-AKTDLYTSVVNLLHDKDDKKAQKDMKVGKNKIPQFAKYDPATKLFKV 411

Query: 442  NSEQCTLILTEGDSAKALAMAGLSVVGRD-RFGVFPLRGKLLNVREASSNQVLNNSEIGN 500
            N  +  L++TEGDSAK LA  G + V R    G++PLRGKL+N   +S   +  N EI  
Sbjct: 412  NDAE--LLITEGDSAKQLANVGRNAVKRHANMGLYPLRGKLMNAGNSSLKALAANKEISE 469

Query: 501  IKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
            + +ILG+    +Y+  + ++L Y HL+I TD                            Q
Sbjct: 470  LIQILGITPYKKYDLASARALPYRHLVIFTD----------------------------Q 501

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWK 617
            D DGSHI GL I  I +  PSLL++ P ++  F TPI+K T+      +FY+  +Y  + 
Sbjct: 502  DVDGSHISGLCIQLIMTLVPSLLEVFPDYIKRFATPILKITSGKHAGKTFYTDAEYREYT 561

Query: 618  ESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
            +    ++ + S+KYYKGLGTST K+ K+YF   + +            +A++LAF  K  
Sbjct: 562  DK-HPDSKNASVKYYKGLGTSTDKDAKQYFTEWSKNVITINNTGQPSTDAMKLAFDAKMS 620

Query: 678  EARKKWLL-QFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKI 736
              R+++L  Q+ P  +++   +      F+  +L+ FS  D  RSIP M+DG K GQRK+
Sbjct: 621  AERREYLANQYNPNANVNYSAQSTTIERFIYDDLMHFSNYDNIRSIPKMLDGQKAGQRKV 680

Query: 737  LFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQ 796
            +F +       EAKVAQ +G  ++ + YHHGE SLA+TI+GMA  + GS+N+ LL P+GQ
Sbjct: 681  VFYALNHVGKNEAKVAQMAGTAAQVTQYHHGEVSLANTIIGMAATYTGSHNLPLLYPSGQ 740

Query: 797  FGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVL 856
            FG+R      AA+ RYIFT +S     L   +D+ +L Y  ++ +++EPT Y+P+IP VL
Sbjct: 741  FGSR-HAKNSAAAPRYIFTHISSFLPRLIKSEDNDVLTYNVDENKKVEPTVYIPVIPIVL 799

Query: 857  VNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH--PWYRGFGGTIEKTASKEA 914
            VNG+ GIGTGW   +P YNP +++   +R+ NG  +      PWY G+ G +E+T     
Sbjct: 800  VNGANGIGTGWKCDVPQYNPLEVIDACKRMANGGELSTSKWVPWYVGYNGKMEETTDGFN 859

Query: 915  GV-TYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTV 973
             + TY V+G        TL + ELPI R T+D+ E ++S+I      I+ + +     +V
Sbjct: 860  SIGTYEVSG-------NTLTVTELPIGRATEDWIESIQSLIPDK---IKNYEKNLGPDSV 909

Query: 974  DFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIR 1033
              ++ L+      +  +  +   KL+T + T+ M L+++K  I  Y  P QI++E    R
Sbjct: 910  TIKLNLT------SPIDDPVATLKLSTKLQTNRMWLYNAKNKITHYAGPTQIIQEHARER 963

Query: 1034 LEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP 1093
            L+ YE  +  Q+E    ++  L NK+R+I+  + G+I + N   + L   L Q G+    
Sbjct: 964  LKLYEASRISQIEKASHKMDLLNNKIRYIMEFIEGKIKIGNMSTSSLNEYLAQNGYL--- 1020

Query: 1094 KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDK 1153
            +++ S   +    TD+                        ++ G LT + V  L      
Sbjct: 1021 RSNNSFRYL----TDD------------------------ISTGQLTTDNVDKLRNQIRN 1052

Query: 1154 LNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
            +  ++D LR+ T   +W+ DL+AL  ++DE
Sbjct: 1053 ITTDIDALRETTANKMWITDLNALRKEVDE 1082


>gi|73852918|ref|YP_294202.1| putative DNA topoisomerase [Emiliania huxleyi virus 86]
 gi|72415634|emb|CAI65871.1| putative DNA topoisomerase [Emiliania huxleyi virus 86]
 gi|283481658|emb|CAZ69774.1| putative DNA topoisomerase [Emiliania huxleyi virus 99B1]
          Length = 1103

 Score =  512 bits (1319), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 364/1170 (31%), Positives = 580/1170 (49%), Gaps = 112/1170 (9%)

Query: 32   QKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI---HRTISYVPGLYKIFDEILV 88
            Q  +Q +HIL RP  Y+G +E        Y +E  TM    H     VP L KI +E L 
Sbjct: 7    QVLTQHDHILARPGMYVGGVEPVE-----YNKEVMTMTGPKHVKEMMVPALLKIIEEPLA 61

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NA+D  Q +P    +KV  DQ    I +  +   V +E   +   Y   L     +T +N
Sbjct: 62   NASDASQNNPVAKNIKVTTDQRDSSIKIETNTKFV-IEYVPDGNDYSVALAVSRFMTGTN 120

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            + D+ +    G++G G KLTN+FS  F +   D    + Y  ++TNNM    +  + K  
Sbjct: 121  FGDDDESFKLGQHGLGIKLTNVFSKYFEVVVHDPSTKQSYHGIWTNNMYTVEKSVVKKAS 180

Query: 209  EGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSF 267
                +  ++F PDL  F +   L      ++  +V DLA    K   V LNG ++P K  
Sbjct: 181  HKTPYVSITFIPDLPYFGLRGPLTAGQWDIIHSQVFDLAVTAPKHTTVHLNGEKIPFKGI 240

Query: 268  AEYV-----DMYPK-SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
              Y+     D   K  + +       R E+ VT++    + + +VNG  T +G  H DY+
Sbjct: 241  KGYIQAVMGDSLDKICMDKVEVNGTVRLEVAVTIARDHAESIVYVNGAHTTRGTIH-DYI 299

Query: 322  ANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS 381
               +AN +       +K  N+    ++  L +   A I N  F SQ KE L    S +G 
Sbjct: 300  FKNIANAL-------SKKHNINPSMLRGLLLIVAEAWIPNARFTSQAKEELYTPVSKYGF 352

Query: 382  KCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGR 441
            K +LS+ F+K + AK+ +  ++++  + K  K  +K+       +   +K + A      
Sbjct: 353  KWDLSQSFIKSL-AKTDLYTSVVNLLHDKDDKKAQKDMKVGKNKIPQFAKYDPATKLFKV 411

Query: 442  NSEQCTLILTEGDSAKALAMAGLSVVGRD-RFGVFPLRGKLLNVREASSNQVLNNSEIGN 500
            N  +  L++TEGDSAK LA  G + V R    G++PLRGKL+N   +S   +  N EI  
Sbjct: 412  NDAE--LLITEGDSAKQLANVGRNAVKRHANMGLYPLRGKLMNAGNSSLKALAANKEISE 469

Query: 501  IKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
            + +ILG+    +Y+  + ++L Y HL+I TD                            Q
Sbjct: 470  LIQILGITPYKKYDLASARALPYRHLVIFTD----------------------------Q 501

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWK 617
            D DGSHI GL I  I +  PSLL++ P ++  F TPI+K T+      +FY+  +Y  + 
Sbjct: 502  DVDGSHISGLCIQLIMTLVPSLLEVFPDYIKRFATPILKITSGKHAGKTFYTDAEYREYT 561

Query: 618  ESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
            +    ++ + S+KYYKGLGTST K+ K+YF   + +            EA++LAF  K  
Sbjct: 562  DK-HPDSKNASVKYYKGLGTSTDKDAKQYFTEWSKNVITINNTGQPSTEAMKLAFDAKMS 620

Query: 678  EARKKWLL-QFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKI 736
              R+++L  Q+ P  +++   +      F+  +L+ FS  D  RSIP M+DG K GQRK+
Sbjct: 621  AERREYLANQYNPNANINYSAQSTTIERFIYDDLMHFSNYDNIRSIPKMLDGQKAGQRKV 680

Query: 737  LFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQ 796
            +F +       EAKVAQ +G  ++ + YHHGE SLA+TI+GMA  + GS+N+ LL P+GQ
Sbjct: 681  VFYALNHVGKNEAKVAQMAGTAAQVTQYHHGEVSLANTIIGMAATYTGSHNLPLLYPSGQ 740

Query: 797  FGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVL 856
            FG+R      AA+ RYIFT +S     L   +D+ +L Y  ++ +++EPT Y+P+IP VL
Sbjct: 741  FGSR-HAKNSAAAPRYIFTHISSFLPRLIKSEDNDVLTYNVDENKKVEPTVYIPVIPIVL 799

Query: 857  VNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH--PWYRGFGGTIEKTASKEA 914
            VNG+ GIGTGW   +P YNP +++   +R+ NG  +      PWY G+ G +E+T     
Sbjct: 800  VNGANGIGTGWKCDVPQYNPLEVIDACKRMANGGELSTSKWVPWYVGYNGKMEETTDGFN 859

Query: 915  GV-TYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTV 973
             + TY V+G        TL + ELPI R T+D+ E ++S+I      I+ + +     +V
Sbjct: 860  SIGTYEVSG-------NTLTVTELPIGRATEDWIESIQSLIPDK---IKNYEKNLGPDSV 909

Query: 974  DFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIR 1033
              ++ L+      +  +  +   KL+T + T+ M L+++K  I  Y  P QI++E    R
Sbjct: 910  TIKLNLT------SPIDDPVATLKLSTKLQTNRMWLYNAKNKITHYAGPTQIIQEHARER 963

Query: 1034 LEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP 1093
            L+ YE  +  Q+E    ++  L NK+R+I+  + G+I +     + L   L Q G+    
Sbjct: 964  LKLYEASRISQIEKASHKMDLLNNKIRYIMEFIEGKIKIGKMSTSSLNEYLAQNGYL--- 1020

Query: 1094 KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDK 1153
            +++ S   +    TD+                        ++ G LT + V  L      
Sbjct: 1021 RSNNSFRYL----TDD------------------------ISTGQLTTDNVDKLRNQIRN 1052

Query: 1154 LNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
            +  ++D LR+ T   +W+ DL+AL  ++DE
Sbjct: 1053 ITTDIDALRETTANKMWITDLNALRKEVDE 1082


>gi|347482390|gb|AEO98331.1| topoisomerase II [Emiliania huxleyi virus 203]
          Length = 1103

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 363/1170 (31%), Positives = 578/1170 (49%), Gaps = 112/1170 (9%)

Query: 32   QKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI---HRTISYVPGLYKIFDEILV 88
            Q  +Q +HIL RP  Y+G +E        Y +E  TM    H     VP L KI +E L 
Sbjct: 7    QVLTQHDHILARPGMYVGGVEPVE-----YNKEVMTMTGPKHVKEMMVPALLKIIEEPLA 61

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NA+D  Q +P    +KV  DQ    I +  +   V +E   +   Y   L     +T +N
Sbjct: 62   NASDASQNNPVAKNIKVTTDQRDSSIKIETNTKFV-IEYVPDGNDYSVALAVSRFMTGTN 120

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            + D+ +    G++G G KLTN+FS  F +   D    + Y  ++TNNM    +  + K  
Sbjct: 121  FGDDDESFKLGQHGLGIKLTNVFSKYFEVVVHDPSTKQSYHGIWTNNMYTVEKSVVKKAS 180

Query: 209  EGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSF 267
                +  ++F PDL  F +   L      ++  +V DLA    K   V LNG ++P K  
Sbjct: 181  HKTPYVSITFIPDLPYFGLRGPLTTGQWDIIHSQVFDLAVTAPKHTTVHLNGEKIPFKGI 240

Query: 268  AEYV-----DMYPK-SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
              Y+     D   K  + +       R E+ VT++    + + +VNG  T +G  H DY+
Sbjct: 241  KGYIQAVMGDSLDKICMDKVEVNGMVRLEVAVTIARDHAESIVYVNGAHTTRGTIH-DYI 299

Query: 322  ANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS 381
               +AN +       +K  N+    ++  L +   A I N  F SQ KE L    S +G 
Sbjct: 300  FKNIANAL-------SKKHNINPSMLRGLLLIVAEAWIPNARFTSQAKEELYTPVSKYGF 352

Query: 382  KCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGR 441
            K +LS+ F+K + AK+ +  ++++  + K  K  +K+       +   +K + A      
Sbjct: 353  KWDLSQSFIKSL-AKTDLYTSVVNLLHDKDDKKAQKDMKVGKNKIPQFAKYDPATKLFKV 411

Query: 442  NSEQCTLILTEGDSAKALAMAGLSVVGRD-RFGVFPLRGKLLNVREASSNQVLNNSEIGN 500
            N  +  L++TEGDSAK LA  G + V R    G++PLRGKL+N   +S   +  N EI  
Sbjct: 412  NDAE--LLITEGDSAKQLANVGRNAVKRHANMGLYPLRGKLMNAGNSSLKALAANKEISE 469

Query: 501  IKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
            + +ILG+    +Y+  + ++L Y HL+I TD                            Q
Sbjct: 470  LIQILGITPYKKYDLASARALPYRHLVIFTD----------------------------Q 501

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWK 617
            D DGSHI GL I  I +  PSLL++ P ++  F TPI+K T+      +FY+  +Y  + 
Sbjct: 502  DVDGSHISGLCIQLIMTLVPSLLEVFPDYIKRFATPILKITSGKHAGKTFYTDAEYREYI 561

Query: 618  ESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
            +    ++ + ++KYYKGLGTST K+ K+YF   + +            EA++LAF  K  
Sbjct: 562  DK-HPDSKNAAVKYYKGLGTSTDKDAKQYFNEWSKNVITISNTGQPSTEAMKLAFDAKMS 620

Query: 678  EARKKWLL-QFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKI 736
              R+++L  Q+ P  ++D   +      F+  +L+ FS  D  RSIP M+DG K GQRK+
Sbjct: 621  AERREYLANQYNPNANVDYSAQSTTIERFIYDDLMHFSNYDNIRSIPKMLDGQKAGQRKV 680

Query: 737  LFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQ 796
            +F +       EAKVAQ +G  ++ + YHHGE SLA+TI+GMA  + GS+N+ LL P+GQ
Sbjct: 681  VFYALNHVGKNEAKVAQMAGTAAQVTQYHHGEVSLANTIIGMAATYTGSHNLPLLYPSGQ 740

Query: 797  FGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVL 856
            FG+R      AA+ RYIFT +S     L   DD+ +L Y  ++ +++EPT Y+P+IP VL
Sbjct: 741  FGSR-HAKNSAAAPRYIFTHISSFLPRLIKSDDNDVLTYNVDENKKVEPTVYIPVIPIVL 799

Query: 857  VNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH--PWYRGFGGTIEKTASKEA 914
            VNG+ GIGTGW   +P YNP +++   +R+ NG  +      PWY G+ G +E+T     
Sbjct: 800  VNGANGIGTGWKCDVPQYNPLEVIDACKRMANGGELSTSKWVPWYVGYNGKMEETTDGFN 859

Query: 915  GV-TYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTV 973
             + TY V+G        TL + ELPI R T+D+ E ++ +I      I+ + +     +V
Sbjct: 860  SIGTYEVSG-------NTLTVTELPIGRATEDWIESIQHLIPDK---IKNYEKNLGPDSV 909

Query: 974  DFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIR 1033
              ++ L+      +  +  +   KL+T + T+ M L+++   I  YD P QI++E    R
Sbjct: 910  TIKLNLT------SPIDDPVATLKLSTKLQTNRMWLYNANNKITHYDGPTQIIQEHARER 963

Query: 1034 LEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP 1093
            L+ YE  +  Q+     ++  L NK+R+I+  + G+I +     + L   L Q G+    
Sbjct: 964  LKLYESSRISQIYKASHKMDLLNNKIRYIMEFIEGKIKIGKMSTSSLNEYLAQNGYL--- 1020

Query: 1094 KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDK 1153
            +++ S   +    TD+                        ++ G LT + V  L      
Sbjct: 1021 RSNNSFRYL----TDD------------------------ISTGQLTTDNVDKLRNQIRN 1052

Query: 1154 LNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
            +  ++D LR+ T   +W+ DL+AL  ++DE
Sbjct: 1053 ITTDIDALRETTANKMWIADLNALRKEVDE 1082


>gi|347600614|gb|AEP15101.1| DNA topoisomerase [Emiliania huxleyi virus 88]
          Length = 1103

 Score =  511 bits (1316), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 363/1170 (31%), Positives = 580/1170 (49%), Gaps = 112/1170 (9%)

Query: 32   QKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI---HRTISYVPGLYKIFDEILV 88
            Q  +Q +HIL RP  Y+G +E        Y +E  TM    H     VP L KI +E L 
Sbjct: 7    QVLTQHDHILARPGMYVGGVEPVE-----YNKEVMTMTGPKHVKEMMVPALLKIIEEPLA 61

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NA+D  Q +P    +KV  DQ    I +  +   V +E   +   Y   L     +T +N
Sbjct: 62   NASDASQNNPVAKNIKVTTDQRDSSIKIETNTKFV-IEYVPDGNDYSVALAVSRFMTGTN 120

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            + D+ +    G++G G KLTN+FS  F +   D    + Y  ++TNNM    +  + K  
Sbjct: 121  FGDDDESFKLGQHGLGIKLTNVFSKYFEVVVHDPSTKQSYHGIWTNNMYTVEKSVVKKAS 180

Query: 209  EGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSF 267
                +  ++F PDL  F +   L      ++  +V DLA    K   V LNG ++P K  
Sbjct: 181  HKTPYVSITFIPDLPYFGLRGPLTAGQWDIIHSQVFDLAVIAPKHTTVHLNGEKIPFKGI 240

Query: 268  AEYV-----DMYPK-SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
              Y+     D   K  + +       R E+ VT++    + + +VNG  T +G  H DY+
Sbjct: 241  KGYIQAVMGDSLDKICMDKVEVNGTVRLEVAVTIARDHAESIVYVNGAHTTRGTIH-DYI 299

Query: 322  ANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS 381
               +AN +       +K  N+    ++  L +   A I N  F SQ KE L    S +G 
Sbjct: 300  FKNIANAL-------SKKHNINPSMLRGLLLIVAEAWIPNARFTSQAKEELYTPVSKYGF 352

Query: 382  KCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGR 441
            K +LS+ F+K + AK+ +  ++++  + K  K  +K+       +   +K + A      
Sbjct: 353  KWDLSQSFIKSL-AKTDLYTSVVNLLHDKDDKKAQKDMKVGKNKIPQFAKYDPATKLFKV 411

Query: 442  NSEQCTLILTEGDSAKALAMAGLSVVGRD-RFGVFPLRGKLLNVREASSNQVLNNSEIGN 500
            N  +  L++TEGDSAK LA  G + V R    G++PLRGKL+N   +S   +  N EI  
Sbjct: 412  NDAE--LLITEGDSAKQLANVGRNAVKRHANMGLYPLRGKLMNAGNSSLKALAANKEISE 469

Query: 501  IKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
            + +ILG+    +Y+  + ++L Y HL+I TD                            Q
Sbjct: 470  LIQILGITPYKKYDLASARALPYRHLVIFTD----------------------------Q 501

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWK 617
            D DGSHI GL I  I +  PSLL++ P ++  F TPI+K T+      +FY+  +Y  + 
Sbjct: 502  DVDGSHISGLCIQLIMTLVPSLLEVFPDYIKRFATPILKITSGKHAGKTFYTDAEYREYT 561

Query: 618  ESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
            +    ++ + S+KYYKGLGTST K+ K+YF   + +            +A++LAF  K  
Sbjct: 562  DK-HPDSKNASVKYYKGLGTSTDKDAKQYFTEWSKNVITINNTGQPSTDAMKLAFDAKMS 620

Query: 678  EARKKWLL-QFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKI 736
              R+++L  Q+ P  +++   +      F+  +L+ FS  D  RSIP M+DG K GQRK+
Sbjct: 621  AERREYLANQYNPNANVNYSAQSTTIERFIYDDLMHFSNYDNIRSIPKMLDGQKAGQRKV 680

Query: 737  LFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQ 796
            +F +       EAKVAQ +G  ++ + YHHGE SLA+TI+GMA  + GS+N+ LL P+GQ
Sbjct: 681  VFYALNHVGKNEAKVAQMAGTAAQVTQYHHGEVSLANTIIGMAATYTGSHNLPLLYPSGQ 740

Query: 797  FGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVL 856
            FG+R      AA+ RYIFT +S     L   +D+ +L Y  ++ +++EPT Y+P+IP VL
Sbjct: 741  FGSR-HAKNSAAAPRYIFTHISSFLPRLIKSEDNDVLTYNVDENKKVEPTVYIPVIPIVL 799

Query: 857  VNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH--PWYRGFGGTIEKTASKEA 914
            VNG+ GIGTGW   +P YNP +++   +R+ NG  +      PWY G+ G +E+T     
Sbjct: 800  VNGANGIGTGWKCDVPQYNPLEVIDACKRMANGGELSTSKWVPWYVGYNGKMEETTDGFN 859

Query: 915  GV-TYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTV 973
             + TY V+G        TL + ELPI R T+D+ E ++S+I      I+ + +     +V
Sbjct: 860  SIGTYEVSG-------NTLTVTELPIGRATEDWIESIQSLIPDK---IKNYEKNLGPDSV 909

Query: 974  DFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIR 1033
              ++ L+      +  +  +   KL+T + T+ M L+++K  I  Y  P QI++E    R
Sbjct: 910  TIKLNLT------SPIDDPVATLKLSTKLQTNRMWLYNAKNKITHYAGPTQIIQEHARER 963

Query: 1034 LEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP 1093
            L+ YE  +  Q+E    ++  L NK+R+I+  + G+I +     + L   L Q G+    
Sbjct: 964  LKLYEASRISQIEKASHKMDLLNNKIRYIMEFIEGKIKIGKMSTSSLNEYLAQNGYL--- 1020

Query: 1094 KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDK 1153
            +++ S   +    TD+                        ++ G LT + V  L      
Sbjct: 1021 RSNNSFRYL----TDD------------------------ISTGQLTTDNVDKLRNQIRN 1052

Query: 1154 LNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
            +  ++D LR+ T   +W+ DL+AL  ++DE
Sbjct: 1053 ITTDIDALRETTANKMWITDLNALRKEVDE 1082


>gi|301170788|dbj|BAJ12008.1| topoisomerase II [Samia cynthia walkeri]
          Length = 463

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 275/496 (55%), Positives = 339/496 (68%), Gaps = 45/496 (9%)

Query: 164 GAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLA 223
           GAKL NIFST+F IETA  +  K +KQ + +NMGK SEP I    + D++TKV+F PDLA
Sbjct: 1   GAKLCNIFSTKFTIETASKQYKKHFKQTWGSNMGKASEPKIKDSGKDDDFTKVTFSPDLA 60

Query: 224 KFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS------ 277
           KF M +LEDD+VALM +R  D+A      VKV LNG R+ +  F +YVD+Y K       
Sbjct: 61  KFKMDNLEDDIVALMSRRAYDVAAS-SPGVKVYLNGERLKINKFKDYVDLYIKGKEDENG 119

Query: 278 --VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK 335
             +   +E+VNERWE+ +TLS   FQQVSFVN IAT KGG HVD VA+ +  +V+ V+ K
Sbjct: 120 QPLKVVYEKVNERWEVALTLSNSGFQQVSFVNSIATTKGGKHVDTVADSIVKNVLEVLKK 179

Query: 336 KNKNANV-KAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVT 394
           KNK   + K   VKNH+WVF+N LI NP FDSQTKE +TL+  SFGSKC LSE+F+  VT
Sbjct: 180 KNKGGVIIKPFQVKNHMWVFINCLIVNPTFDSQTKENMTLQAKSFGSKCTLSEKFITAVT 239

Query: 395 AKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGD 454
            KSG+VE++ +WA FK   +L K  G K   ++GI KLEDAN AG +N+  CTLILTEGD
Sbjct: 240 -KSGLVESVWTWAKFKAQTELVKASGKKQSKLKGIPKLEDANDAGTKNAHLCTLILTEGD 298

Query: 455 SAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN 514
           SAK LA++GLSVVGRD +GVFPL+GK LNVR+AS  QVL N EI N+ KI+GL+   +YN
Sbjct: 299 SAKTLAVSGLSVVGRDHYGVFPLKGKPLNVRDASHKQVLENVEINNLIKIVGLQYKKKYN 358

Query: 515 NV---KSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLIN 571
           +V   KSLRYG +MIM D                            QD DGSHIKGL+IN
Sbjct: 359 SVDDLKSLRYGKVMIMAD----------------------------QDQDGSHIKGLIIN 390

Query: 572 FIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKY 631
           FIH  WP LLK+P FL EFITPIVKAT K+ K +SFYS+P++E WK     N  +++IKY
Sbjct: 391 FIHHNWPELLKLP-FLEEFITPIVKATKKD-KEISFYSLPEFEEWKNET-ENHHTFNIKY 447

Query: 632 YKGLGTSTSKEGKEYF 647
           YKGLGTSTSKE KEYF
Sbjct: 448 YKGLGTSTSKEAKEYF 463


>gi|347600951|gb|AEP15437.1| DNA topoisomerase II [Emiliania huxleyi virus 207]
 gi|347601587|gb|AEP16072.1| DNA topoisomerase II [Emiliania huxleyi virus 208]
 gi|357973017|gb|AET98290.1| DNA topoisomerase II [Emiliania huxleyi virus 201]
          Length = 1103

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 362/1170 (30%), Positives = 578/1170 (49%), Gaps = 112/1170 (9%)

Query: 32   QKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI---HRTISYVPGLYKIFDEILV 88
            Q  +Q +HIL RP  Y+G +E        Y +E  TM    H     VP L KI +E L 
Sbjct: 7    QVLTQHDHILARPGMYVGGVEPVE-----YNKEVMTMTGPKHVKEMMVPALLKIIEEPLA 61

Query: 89   NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
            NA+D  Q +P    +KV  DQ    I +  +   V +E   +   Y   L     +T +N
Sbjct: 62   NASDASQNNPVAKNIKVTTDQRDSSIKIETNTKFV-IEYVPDGNDYSVALAVSRFMTGTN 120

Query: 149  YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
            + D+ +    G++G G KLTN+FS  F +   D    + Y  ++TNNM    +  + K  
Sbjct: 121  FGDDDESFKLGQHGLGIKLTNVFSKYFEVVVHDPSTKQSYHGIWTNNMYTVEKSVVKKAS 180

Query: 209  EGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSF 267
                +  ++F PDL  F +   L      ++  +V DLA    K   V LNG ++P K  
Sbjct: 181  HKTPYVSITFIPDLPYFGLRGPLTTGQWDIIHSQVFDLAVTAPKHTTVHLNGEKIPFKGI 240

Query: 268  AEYV-----DMYPK-SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
              Y+     D   K  + +       R E+ VT++    + + +VNG  T +G  H DY+
Sbjct: 241  KGYIQAVMGDSLDKICMDKVEVNGMVRLEVAVTIARDHAESIVYVNGAHTTRGTIH-DYI 299

Query: 322  ANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS 381
               +AN +       +K  N+    ++  L +   A I N  F SQ KE L    S +G 
Sbjct: 300  FKNIANAL-------SKKHNINPSMLRGLLLIVAEAWIPNARFTSQAKEELYTPVSKYGF 352

Query: 382  KCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGR 441
            K +LS+ F+K + AK+ +  ++++  + K  K  +K+       +   +K + A      
Sbjct: 353  KWDLSQSFIKSL-AKTDLYTSVVNLLHDKDDKKAQKDMKVGKNKIPQFAKYDPATKLFKV 411

Query: 442  NSEQCTLILTEGDSAKALAMAGLSVVGRD-RFGVFPLRGKLLNVREASSNQVLNNSEIGN 500
            N  +  L++TEGDSAK LA  G + V R    G++PLRGKL+N   +S   +  N EI  
Sbjct: 412  NDAE--LLITEGDSAKQLANVGRNAVKRHANMGLYPLRGKLMNAGNSSLKALAANKEISE 469

Query: 501  IKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
            + +ILG+    +Y+  + ++L Y HL+I TD                            Q
Sbjct: 470  LIQILGITPYKKYDLASARALPYRHLVIFTD----------------------------Q 501

Query: 559  DHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWK 617
            D DGSHI GL I  I +  PSLL++ P ++  F TPI+K T+      +FY+  +Y  + 
Sbjct: 502  DVDGSHISGLCIQLIMTLVPSLLEVFPDYIKRFATPILKITSGKHAGKTFYTDAEYREYI 561

Query: 618  ESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
            +    ++ + ++KYYKGLGTST K+ K+YF   + +            EA++LAF  K  
Sbjct: 562  DK-HPDSKNAAVKYYKGLGTSTDKDAKQYFNEWSKNVITISNTGQPSTEAMKLAFDAKMS 620

Query: 678  EARKKWLL-QFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKI 736
              R+++L  Q+ P  ++D   +      F+  +L+ FS  D  RSIP M+DG K GQRK+
Sbjct: 621  AERREYLANQYNPNANVDYSAQSTTIERFIYDDLMHFSNYDNIRSIPKMLDGQKAGQRKV 680

Query: 737  LFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQ 796
            +F +       EAKVAQ +G  ++ + YHHGE SLA+TI+GMA  + GS+N+ LL P+GQ
Sbjct: 681  VFYALNHVGKNEAKVAQMAGTAAQVTQYHHGEVSLANTIIGMAATYTGSHNLPLLYPSGQ 740

Query: 797  FGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVL 856
            FG+R      AA+ RYIFT +S     L   +D+ +L Y  ++ +++EPT Y+P+IP VL
Sbjct: 741  FGSR-HAKNSAAAPRYIFTHISSFLPRLIKSEDNDVLTYNVDENKKVEPTVYIPVIPIVL 799

Query: 857  VNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH--PWYRGFGGTIEKTASKEA 914
            VNG+ GIGTGW   +P YNP +++   +R+ NG  +      PWY G+ G +E+T     
Sbjct: 800  VNGANGIGTGWKCDVPQYNPLEVIDACKRMANGGELSTSKWVPWYVGYNGKMEETTDGFN 859

Query: 915  GV-TYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTV 973
             + TY V+G        TL + ELPI R T+D+ E ++ +I      I+ + +     +V
Sbjct: 860  SIGTYEVSG-------NTLTVTELPIGRATEDWIESIQHLIPDK---IKNYEKNLGPDSV 909

Query: 974  DFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIR 1033
              ++ L+      +  +  +   KL+T + T+ M L+++   I  YD P QI++E    R
Sbjct: 910  TIKLNLT------SPIDDPVATLKLSTKLQTNRMWLYNANNKITHYDGPTQIIQEHARER 963

Query: 1034 LEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP 1093
            L+ YE  +  Q+     ++  L NK+R+I+  + G+I +     + L   L Q G+    
Sbjct: 964  LKLYESSRISQIYKASHKMDLLNNKIRYIMEFIEGKIKIGKMSTSSLNEYLAQNGYL--- 1020

Query: 1094 KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDK 1153
            +++ S   +    TD+                        ++ G LT + V  L      
Sbjct: 1021 RSNNSFRYL----TDD------------------------ISTGQLTTDNVDKLRNQIRN 1052

Query: 1154 LNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
            +  ++D LR+ T   +W+ DL+AL  ++DE
Sbjct: 1053 ITTDIDALRETTANKMWIADLNALRKEVDE 1082


>gi|312076266|ref|XP_003140784.1| hypothetical protein LOAG_05200 [Loa loa]
          Length = 446

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 256/449 (57%), Positives = 335/449 (74%), Gaps = 15/449 (3%)

Query: 58  LWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVH 117
           +W+Y+ E+  ++ R ISYVPGLYKIFDEILVNAADNKQRDPKM+ +KV I++E + IS++
Sbjct: 1   MWVYDTETDRIVQREISYVPGLYKIFDEILVNAADNKQRDPKMNLIKVNINKEENEISIY 60

Query: 118 NSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFII 177
           N+G G+PV +H+ E +YVPELIFG LLTSSNYDD+ +K TGGRNGYGAKL NIFS EF +
Sbjct: 61  NNGRGIPVVLHKIEKLYVPELIFGTLLTSSNYDDSERKVTGGRNGYGAKLCNIFSKEFTL 120

Query: 178 ETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVAL 237
           ET+  +  K +KQ + NNM K  EP I+  K  D +T+V+FKPDLAKF MT L+DD+VAL
Sbjct: 121 ETSTNEYEKAFKQTWVNNMSKGEEPKITTSKRED-FTRVTFKPDLAKFKMTKLDDDIVAL 179

Query: 238 MKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPK--------SVTRFHERVNERW 289
           M +R  D+AG   + VKV LN  ++PV+ F +YV+ Y K        +    +E V+ RW
Sbjct: 180 MCRRAYDIAGST-RGVKVFLNNKQIPVQGFKQYVEQYVKHNVDNNGEAYKVVYESVSPRW 238

Query: 290 EICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK---KNKNANVKAHN 346
           E+ +T+S+  FQQVSF N IAT KGG HVDYV +Q+A+ ++ V+ K   K+   NVK   
Sbjct: 239 EVALTISDKGFQQVSFANSIATTKGGRHVDYVVDQIASKLIDVIKKKIGKSGGINVKPFQ 298

Query: 347 VKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSW 406
           +KNH+W+FVNALI+NP FDSQTKET+TL+  SFGS CELSE+F+ +   K GIVE +++W
Sbjct: 299 IKNHMWIFVNALIENPTFDSQTKETMTLQSKSFGSTCELSEKFI-QAALKCGIVEAIMAW 357

Query: 407 ANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLS 465
             FKQ + L KK    KT  ++G+ KLEDAN AG +NS QCTLILTEGDSAK+LA++GL 
Sbjct: 358 VRFKQQETLDKKCSSKKTSKLKGVPKLEDANDAGTKNSAQCTLILTEGDSAKSLAVSGLG 417

Query: 466 VVGRDRFGVFPLRGKLLNVREASSNQVLN 494
           VVGRD++GVFPLRGK+LNVRE +  QV++
Sbjct: 418 VVGRDKYGVFPLRGKMLNVREGNHKQVID 446


>gi|448931890|gb|AGE55451.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus MA-1E]
          Length = 570

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 286/611 (46%), Positives = 381/611 (62%), Gaps = 57/611 (9%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
           YQK SQ EH+L RPDTYIGS+   T+  W+Y +    +I + ++Y P L KIFDEI+ N+
Sbjct: 4   YQKLSQREHVLARPDTYIGSVAPQTKNEWVYVDGK--IIRKDVTYPPALLKIFDEIITNS 61

Query: 91  ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
           AD   RD K+  +KV ID++   +SVHN G  +P+E H  E  Y+PELIFGHLL   N+D
Sbjct: 62  ADCYNRDKKLTVLKVCIDEKS--VSVHNDGCNIPIEKHDAEKCYIPELIFGHLLAGENFD 119

Query: 151 DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
           D+ ++T  GRNG G+K TNIFS +F +E  DGK  KKYKQ + NNM   S+P ++ C + 
Sbjct: 120 DSEQRTGAGRNGIGSKATNIFSKKFDVEICDGK--KKYKQSWENNMSVMSKPKVTTCSK- 176

Query: 211 DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
           D++   +F PD  +F +   +DD +++M +RV D+A  L K VKV LNG R+ +K+  +Y
Sbjct: 177 DSYITTTFFPDFERFGIDSFDDDTMSIMVRRVYDMAAVLNK-VKVMLNGKRLEIKNTEDY 235

Query: 271 VDMYPKSVT---RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVAN 327
             +Y  + T   R  E   E W++ V+ S+ +F  VSFVN + T +GGTHV+ V + VA 
Sbjct: 236 FSLYVGNKTETKRAFEHTPENWDVAVSCSD-EFTPVSFVNSVVT-RGGTHVNAVTDAVAK 293

Query: 328 HVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE 387
            V+       K   VK   VK  ++VFVNA + NP FDSQTKE LT R +    +  LS+
Sbjct: 294 AVVE--AAAKKKIVVKPATVKGRMFVFVNATVFNPTFDSQTKENLTSRNA----RVTLSD 347

Query: 388 EFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            F+KK  A   +++ ++   N + S    K+LKK DG K   V GI KL DA  AG +NS
Sbjct: 348 TFVKK--AVGVLLDAVIQETNVRTSLVDQKELKKTDGAKKSRVSGIPKLNDAAWAGTKNS 405

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
           + CTLILTEGDSA  LA+AGLSVVGR+R+GVFPLRGKLLNVR+AS   +  N EI  +K+
Sbjct: 406 KMCTLILTEGDSAATLAIAGLSVVGRERYGVFPLRGKLLNVRDASVASITKNEEITALKQ 465

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           ILGL+ G  Y +  SLRYGH+MIMTD                             D DG+
Sbjct: 466 ILGLQTGKVYKDTSSLRYGHVMIMTDA----------------------------DVDGT 497

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSMPDYEAWKESLGG 622
           HI GL++NF HS +PSLL+IP FL +FITPIV A  K GK V  FYS+PDYE W ++   
Sbjct: 498 HISGLVMNFFHSCFPSLLEIPGFLKKFITPIVVA--KRGKDVREFYSLPDYEDWVKTT-K 554

Query: 623 NASSWSIKYYK 633
           + S + IKYYK
Sbjct: 555 DYSKYQIKYYK 565


>gi|448931144|gb|AGE54707.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus KS1B]
          Length = 570

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 285/611 (46%), Positives = 381/611 (62%), Gaps = 57/611 (9%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
           YQK SQ EH+L RPDTYIGS+   T+  W+Y +    +I + ++Y P L KIFDEI+ N+
Sbjct: 4   YQKLSQREHVLARPDTYIGSVAPQTKNEWVYVDGK--IIRKDVTYPPALLKIFDEIITNS 61

Query: 91  ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
           AD   RD K+  +KV ID++   +SVHN G  +P+E H  E  Y+PELIFGHLL   N+D
Sbjct: 62  ADCYNRDKKLTVLKVCIDEKS--VSVHNDGCNIPIEKHDAEKCYIPELIFGHLLAGENFD 119

Query: 151 DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
           D+ ++T  GRNG G+K TNIFS +F +E  DGK  KKYKQ + NNM   S+P ++ C + 
Sbjct: 120 DSEQRTGAGRNGIGSKATNIFSKKFDVEICDGK--KKYKQSWENNMSVMSKPKVTTCSK- 176

Query: 211 DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
           D++   +F PD  +F +   +DD +++M +RV D+A  L K VKV LNG R+ +K+  +Y
Sbjct: 177 DSYITTTFFPDFERFGIESFDDDTMSIMVRRVYDMAAVLNK-VKVMLNGKRLEIKNTEDY 235

Query: 271 VDMYPKSVT---RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVAN 327
             +Y  + T   R  E   + W++ V+ S+ +F  VSFVN + T +GGTHV+ V + VA 
Sbjct: 236 FSLYVGNKTETKRAFEHTPDNWDVAVSCSD-EFTPVSFVNSVVT-RGGTHVNAVTDAVAK 293

Query: 328 HVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE 387
            V+       K   VK   VK  ++VFVNA + NP FDSQTKE LT R +    +  LS+
Sbjct: 294 AVVE--AAAKKKIVVKPATVKGRMFVFVNATVVNPTFDSQTKEILTSRNA----RVTLSD 347

Query: 388 EFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            F+KK  A   +++ ++   N + S    K+LKK DG K   V GI KL DA  AG +NS
Sbjct: 348 TFVKK--AVGVLLDAVIQETNVRTSLVDQKELKKTDGAKKSRVSGIPKLNDAAWAGTKNS 405

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
           + CTLILTEGDSA  LA+AGLSVVGR+R+GVFPLRGKLLNVR+AS   +  N EI  +K+
Sbjct: 406 KMCTLILTEGDSAATLAIAGLSVVGRERYGVFPLRGKLLNVRDASVASITKNEEITALKQ 465

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           ILGL+ G  Y +  SLRYGH+MIMTD                             D DG+
Sbjct: 466 ILGLQTGKVYKDTSSLRYGHVMIMTDA----------------------------DVDGT 497

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSMPDYEAWKESLGG 622
           HI GL++NF HS +PSLL+IP FL +FITPIV A  K GK V  FYS+PDYE W ++   
Sbjct: 498 HISGLVMNFFHSCFPSLLEIPGFLKKFITPIVVA--KRGKDVREFYSLPDYEDWVKTT-K 554

Query: 623 NASSWSIKYYK 633
           + S + IKYYK
Sbjct: 555 DYSKYQIKYYK 565


>gi|448935344|gb|AGE58895.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus NYs1]
          Length = 571

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 282/611 (46%), Positives = 375/611 (61%), Gaps = 57/611 (9%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
           YQK SQ +H+L RPDTYIGS    T+  W+Y   +  +I + ++Y   L KIFDEI+ N+
Sbjct: 5   YQKLSQRDHVLARPDTYIGSTAPQTKNEWVYV--NGKVIKKDVTYSSALLKIFDEIITNS 62

Query: 91  ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
           AD   RD ++  +K+ ID+    +SVHN G  +P+E H  E  Y+PELIFGHLL   N+D
Sbjct: 63  ADCYNRDKRLTILKICIDETS--VSVHNDGCSIPIEKHDVEKCYIPELIFGHLLAGENFD 120

Query: 151 DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
           D  ++T  GRNG G+K TNIFS  F +E  DG   KKYKQ + +NM   S+P ++ C + 
Sbjct: 121 DTEQRTGAGRNGIGSKATNIFSRIFDVEICDGN--KKYKQTWRDNMSIVSKPKVTTCSK- 177

Query: 211 DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
           + +   +F PD  +F +   +DD++++M++RV D+A  LGK VKV LNG R+ +K+  +Y
Sbjct: 178 NPYITTTFFPDFVRFGVETFDDDILSVMRRRVYDMAAVLGK-VKVMLNGKRLEIKNTEDY 236

Query: 271 VDMYPKSVT---RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVAN 327
             +Y  S T   R  E   E W++ V   E  F  VSFVN + T +GGTHV+ V + ++ 
Sbjct: 237 FSLYIGSKTETKRAFEHTPEEWDVGVACVE-DFTPVSFVNSVVT-RGGTHVNAVTDAISK 294

Query: 328 HVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE 387
            V+    KK     V+   VKN ++VFVNA I NP FDSQTKE LT R +    +  LSE
Sbjct: 295 AVVEAAAKKK--ITVRPLTVKNRMFVFVNATIVNPTFDSQTKEILTSRNA----RVTLSE 348

Query: 388 EFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            F+KK  A   +++ ++   N + S    K+LKK DG K   V GI KL DA  AG  NS
Sbjct: 349 AFMKK--AVGVLLDAVIQETNVRTSLVDQKELKKTDGAKKIRVTGIPKLNDATWAGTNNS 406

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
           + CTLILTEGDSA  LA+AGLSVVGR+R+GVFPLRGKLLNVR+AS   +  N EI  +K+
Sbjct: 407 KMCTLILTEGDSAATLAIAGLSVVGRERYGVFPLRGKLLNVRDASVASITKNEEITALKQ 466

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           ILGL+ G  Y +  SLRYGH+MIMTD                             D DG+
Sbjct: 467 ILGLQTGKVYKDTSSLRYGHVMIMTDA----------------------------DVDGT 498

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSMPDYEAWKESLGG 622
           HI GL++NF HS +PSLL+IP FL +FITPIV A  K GK V  FYS+PDYE W ++   
Sbjct: 499 HISGLVMNFFHSCFPSLLEIPGFLKKFITPIVVA--KKGKDVREFYSLPDYEDWVKTT-K 555

Query: 623 NASSWSIKYYK 633
           + S + IKYYK
Sbjct: 556 DYSKYQIKYYK 566


>gi|321473409|gb|EFX84376.1| hypothetical protein DAPPUDRAFT_670 [Daphnia pulex]
          Length = 667

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 286/695 (41%), Positives = 412/695 (59%), Gaps = 56/695 (8%)

Query: 420  GTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRG 479
            G K   + GI KLEDA+LAG   S  CTL LTEGDS KA+ ++GL  +G D+ GVFPL  
Sbjct: 1    GNKPTRLMGILKLEDAHLAGTSESIDCTLFLTEGDSVKAVVVSGLEKIGYDKNGVFPLGR 60

Query: 480  KLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNV---KSLRYGHLMIMTDQVLLAPL 536
            KLLNVR A+S Q+  N E+ N+ KILGL+ G +Y+ V   KSLRYG L+IMTD       
Sbjct: 61   KLLNVRVATSEQIAKNLEVNNLMKILGLEYGKKYDTVEDLKSLRYGRLVIMTDP------ 114

Query: 537  SFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK 596
                                  D DG+  KGL+INF+H  WPSLL++P FL +F+ PIVK
Sbjct: 115  ----------------------DPDGAQFKGLIINFLHYNWPSLLRLP-FLQQFVIPIVK 151

Query: 597  ATNKNGKV---LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLH 653
            AT   G++   L+FYS+ ++E WK +   N   + IK+YKGL T   +E KE F N+  H
Sbjct: 152  ATKGIGELAESLTFYSLDEFEQWK-TQTENWRHYHIKHYKGLETLRKEEVKECFSNLQRH 210

Query: 654  KKDFVWEDDQDGEAIELAFSKKKIEARK----------KWLLQFEPGNHLDQKE-KYIKY 702
            + DF    D D  AI +AF+ K +E  +          K L Q      L  K+ K + Y
Sbjct: 211  QIDFRHGGDDDDRAISMAFNNKHLEEWRYRLNVWKNACKDLRQLGFSGDLYAKDIKEVSY 270

Query: 703  SDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHS 762
             DFV K+LI F   +  RS+PS++DG    QRK L+   KR++ +E  VAQ +  V+E+ 
Sbjct: 271  HDFVKKDLIRFRNMEYVRSVPSIMDGFNERQRKTLYTCIKRDYKEEINVAQLAVSVAENC 330

Query: 763  AYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITR 822
            AY+  +  L  TI G+AQDFVGSNNINLL PNGQF +R+   KD  S  YIFT +S ITR
Sbjct: 331  AYYQPDL-LIGTITGLAQDFVGSNNINLLIPNGQFASRHLESKDVGSPDYIFTMMSKITR 389

Query: 823  FLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVAN 882
             +F   DD LL Y  +  Q IEP ++ PIIP VLVNG+ GIGTG+ + IP  NPR+I+ N
Sbjct: 390  KIFHPRDDPLLKYRTDGNQSIEPEYFAPIIPMVLVNGANGIGTGFKTKIPKQNPREIIEN 449

Query: 883  VRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRW 942
            ++R+LNGE   PM PW++G+ GT+E+       + + ++G +  ++ TT+ I ELP+   
Sbjct: 450  LKRMLNGEKPNPMDPWFKGYRGTVERIDQ----LNFVISGELAVLSPTTIEITELPVDVP 505

Query: 943  TQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKL 998
            T++Y++  LE ++   ++    I  ++++  D  V F V ++E+ M + + EG  + FKL
Sbjct: 506  TENYKKSVLEKLLCGSEECPPIITDYQEHHTDNNVRFVVTMTEKMMQQVESEGFHRAFKL 565

Query: 999  TTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENK 1058
             +  S  +M L+DS G +K Y++ + I+ EF+ +RLE Y KR+      +E    +L N+
Sbjct: 566  QSVYSLRSMLLYDSNGSLKTYNSVDDIMNEFYEVRLELYRKRRDYFSGKVEALRARLVNQ 625

Query: 1059 VRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP 1093
              F+  + +  ++V++ K   LL ELR++ + P P
Sbjct: 626  NNFLTEISSKVLIVDSEKFDVLLEELRRRNYAPDP 660


>gi|356927887|gb|AET42677.1| DNA topoisomerase II [Emiliania huxleyi virus 202]
          Length = 1103

 Score =  494 bits (1272), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 368/1202 (30%), Positives = 584/1202 (48%), Gaps = 144/1202 (11%)

Query: 32   QKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTM-----IHRTISYVPGLYKIFDEI 86
            Q  +Q +HIL RP  Y+G +E        Y +E  TM     +   ++  P L KI +E 
Sbjct: 7    QVLTQHDHILKRPGMYVGGVEPVE-----YNKEVMTMAGPKRVKEMMT--PALLKIIEEP 59

Query: 87   LVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
            L NA+D  Q DP    +KV  D     I +  +     +E   +   Y   L     +T 
Sbjct: 60   LANASDASQNDPGSKNIKVTTDPRDSSIKIE-TNTKFKIEYIPDGNDYSVALAVSRFMTG 118

Query: 147  SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
            +N+ D+ +    G++G G K TN+FS  F +   D    + Y  ++TNNM    +  + K
Sbjct: 119  TNFGDDEESFKLGQHGIGLKATNVFSKYFEVIVHDPSTKQSYHGIWTNNMYTVEKSVVKK 178

Query: 207  CKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
                  +  ++F PDL  F +   L      L+  +V DLA    K   V LNG ++P K
Sbjct: 179  SPHKTPYVSITFIPDLPYFGLRGPLTPGQWDLIHSQVFDLAVTAPKHTSVHLNGEKIPFK 238

Query: 266  SFAEYV------DMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
                YV       +    + +       R E+ VT++    + + +VNG  T +G  H D
Sbjct: 239  GIKGYVQAIMGDSLEKICMDKVEVNGTLRLEVAVTVARDHAESIVYVNGAHTTRGTIH-D 297

Query: 320  YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
            Y+   +A+ +       +K  N+    +K  L +   A I N  F SQ KE L    S +
Sbjct: 298  YIFKNIASAL-------SKKHNINPGMLKGLLLIVAEAWIPNARFTSQAKEELYTPVSKY 350

Query: 380  GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG 439
            G K ELS+ F++ + AK+ +  ++++    K  K  +K+       +   +K + A    
Sbjct: 351  GFKWELSKSFIQAL-AKTDLYTSVVNLLQDKDDKKAQKDMKVGKNKIPQFAKYDPATKLF 409

Query: 440  GRNSEQCTLILTEGDSAKALAMAGLSVVGRD-RFGVFPLRGKLLNVREASSNQVLNNSEI 498
              N  +  L++TEGDSAK LA  G + V R    G++PLRGKL+N   +S   +  N EI
Sbjct: 410  KVNDAE--LLVTEGDSAKQLANVGRNAVKRHANMGLYPLRGKLMNAGNSSLKALAANKEI 467

Query: 499  GNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
              + +ILG+    +Y+  + ++L Y HL++ TD                           
Sbjct: 468  SELIQILGITPYKKYDLASARALPYRHLVLFTD--------------------------- 500

Query: 557  AQDHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVKATNKNGKVLSFYSMPDYEA 615
             QD DGSHI GL I  I +  PSLL++ P ++  F TPI+K T+      SFY+  +Y  
Sbjct: 501  -QDVDGSHISGLCIQLIMTLVPSLLEVFPDYIKRFATPILKITSGKHSGKSFYTDAEYRE 559

Query: 616  W--KESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ---DGEAIEL 670
            +  K     NA   S+KYYKGLGTST K+ K+YF   T   K+ +  ++      +A++L
Sbjct: 560  FIKKHPEAKNA---SVKYYKGLGTSTDKDAKQYF---TEWDKNVITINNNGQPSKDAVKL 613

Query: 671  AFSKKKIEARKKWLL-QFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            AF  K    R+ +L  Q++P  ++D  +       F+  +L+ FS +D  RSIP M+DG 
Sbjct: 614  AFDAKMSAERRDYLANQYDPDANIDYSKSSTTIERFIYDDLMHFSNSDNLRSIPKMLDGQ 673

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            K GQRK++F +       EAKVAQ +G  ++ + YHHGE SLA+TI+GMA  + GS+N+ 
Sbjct: 674  KAGQRKVVFYALNHVGKTEAKVAQMAGTAAQVTQYHHGEVSLANTIIGMAATYTGSHNLP 733

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL P+GQFG+R      AA+ RYIFT +S     L   +D  +L Y  ++ +++EPT Y+
Sbjct: 734  LLYPSGQFGSR-HSRNSAAAPRYIFTHISSFLPRLIKSEDSDVLTYNVDENKKVEPTVYI 792

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH--PWYRGFGGTIE 907
            P+IP VLVNG+ GIGTGW   +P YNP +++   +R+ NG  +      PWY G+ G +E
Sbjct: 793  PVIPIVLVNGANGIGTGWKCDVPQYNPLEVIDACKRMANGGELSTAKWVPWYVGYNGKME 852

Query: 908  KTASKEAGV-TYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQ 966
            +T      + TY       EVN  T+ I ELPI + T+D+ E ++ +I            
Sbjct: 853  ETTDGFNSIGTY-------EVNGNTITINELPIGKATEDWIESIQDLI------------ 893

Query: 967  YSDDTTVDFEVFLSEESM-----MRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDT 1021
               DT  ++E  L  +S+     +       +   KL+  I T+ M ++++K  I  Y  
Sbjct: 894  --PDTIKNYEKNLGPDSVTIKLNLAVPLADPVSTLKLSVKIPTNRMWMYNAKNKITHYTG 951

Query: 1022 PEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLL 1081
            P Q+++E    RL+ YE  +  Q+E    ++  L NK+R+I+  + G+I +     T L 
Sbjct: 952  PNQVIQEHARERLKLYEMSRISQIEKASHKMDLLNNKIRYIMEFIEGKIKIGKMSTTALN 1011

Query: 1082 LELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTL 1141
              L Q G+T   +++ S   +    TD+                        ++ G LT 
Sbjct: 1012 EYLAQNGYT---RSNNSFRYL----TDD------------------------ISTGQLTT 1040

Query: 1142 EKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDE--------LDKSDARAEE 1193
            + V+ L      +  ++D LR+ T   +W  DL+AL  ++++        LD+   +A++
Sbjct: 1041 DNVEKLRNQIRNIAADIDMLRETTANKMWTTDLNALRKEVEDYIVERLTPLDEDAPKAKK 1100

Query: 1194 ER 1195
             R
Sbjct: 1101 AR 1102


>gi|297822377|ref|XP_002879071.1| hypothetical protein ARALYDRAFT_901604 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297324910|gb|EFH55330.1| hypothetical protein ARALYDRAFT_901604 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 538

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 267/455 (58%), Positives = 319/455 (70%), Gaps = 62/455 (13%)

Query: 6   RLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES 65
           +LPL   +NANV    A +     +    + +EHILL PD+YIGSIEKHTQ LW+YE+E 
Sbjct: 4   KLPLQNIDNANVAKAPASS-----LASAGNTVEHILLCPDSYIGSIEKHTQTLWVYEKEE 58

Query: 66  KTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPV 125
             M+ R+++YVPGLYKIFDEILVNAADNK+RDP MD+VKVVID E + ISV NSGDGVP+
Sbjct: 59  --MVCRSVTYVPGLYKIFDEILVNAADNKRRDPSMDSVKVVIDVEKNQISVCNSGDGVPL 116

Query: 126 EIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR- 184
           E    EGVYVP + FG  L S NYD NVK TTGGRNG+GA LTNIFSTEFIIE ADGKR 
Sbjct: 117 E----EGVYVPGIFFGPWL-SRNYDYNVKNTTGGRNGFGATLTNIFSTEFIIEIADGKRS 171

Query: 185 LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
           LKKYK+VF NNMG KS+  I+KC + +NWTKV+FKPDL KFNMT LE+DVVALM KRV D
Sbjct: 172 LKKYKRVFENNMGNKSKLFITKCNKSENWTKVTFKPDLKKFNMTELENDVVALMSKRVFD 231

Query: 245 LAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVT--------RFHERVNERWEICVTLS 296
           +AGCLG++VKVELN  RVP+KSF++YVD+Y  + +        R +E+VN+RWE+CV+LS
Sbjct: 232 IAGCLGQTVKVELNEKRVPIKSFSDYVDLYLSAASKSRTEPLPRMNEKVNDRWEVCVSLS 291

Query: 297 EGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVN 356
           +GQFQQ                                   K  NVK  NVKNHLWVFVN
Sbjct: 292 DGQFQQ----------------------------------KKYPNVKTDNVKNHLWVFVN 317

Query: 357 ALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVET-LLSWANFKQSKDL 415
           ALIDNPAFDSQTKE LTL +SSFGSKCELS+  LKK     G+VE  L SW  + Q+++L
Sbjct: 318 ALIDNPAFDSQTKERLTLPESSFGSKCELSKAILKK-----GLVEHFLFSWKTWVQNEEL 372

Query: 416 KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLIL 450
           K +DG KTE V  + +L DA  AGG+ SE  T I 
Sbjct: 373 KISDGAKTETVE-VEELMDAEKAGGKESEPGTHIF 406



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 28/145 (19%)

Query: 1032 IRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTP 1091
            + LE+YEK+K+  L+N E            I+       ++   K  D   +LR+K FT 
Sbjct: 413  LTLEYYEKKKETMLKNQE------------IMLKNLELELLKLEKADD--QKLREKWFTE 458

Query: 1092 FPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADR 1151
              +N+K +EA VAGAT+  E+S              Y+YLL  ++  L  + VQ + A R
Sbjct: 459  ILENAKPVEAAVAGATNAAEKSSY------------YNYLLQFSV--LITDTVQEVRAQR 504

Query: 1152 DKLNEEVDDLRKATPESLWVKDLDA 1176
            D++ + V+DL+ ATPESLW+K+L+ 
Sbjct: 505  DQMMDAVEDLKNATPESLWLKELEV 529


>gi|324507090|gb|ADY43013.1| DNA topoisomerase 2 [Ascaris suum]
          Length = 625

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/645 (40%), Positives = 398/645 (61%), Gaps = 31/645 (4%)

Query: 555  MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYE 614
            M  QD DG+HI+GL+INF+HSFWPSL++   F+  F+TP++KA  +  +V+SFYS  ++E
Sbjct: 3    MTDQDEDGAHIRGLIINFLHSFWPSLIR-SDFIQYFVTPLLKA-RRGSEVISFYSNSEFE 60

Query: 615  AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
             WK     N+  +SIKYYKGLGTS+++E +EYF  +  H+  FV+  ++D E+I LAF K
Sbjct: 61   KWKRDFP-NSKKYSIKYYKGLGTSSAEEAREYFAEMDRHRVQFVYGGEEDDESIRLAFDK 119

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIK--YSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
             + + RK W+          ++E   +  YS+F+N+ELI FS  D++RS+P+ +DGLKP 
Sbjct: 120  SRADDRKIWIAHTSENTDSRKRENLNQRTYSEFINEELIDFSRLDIRRSVPNAIDGLKPS 179

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            QRK+L+   +R    E +V Q +G V+   AYHHGE+ L +TI+ +AQDFVGSNN+NLLQ
Sbjct: 180  QRKVLYTLMQRFEKSEVRVVQLAGAVAHSCAYHHGEEPLINTIVRLAQDFVGSNNLNLLQ 239

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P GQFGTR  GG+D ASARYI+T LSP+ R++FP+ DD +L Y+ ED  +IEP W+ PII
Sbjct: 240  PIGQFGTRLIGGEDCASARYIYTALSPLVRWIFPRADDSVLSYIEEDNMRIEPQWFCPII 299

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P VLVNG+EGIGTGW++ +  YNP+ ++ NV+R+++G+ ++ M P+YR F GTI++ +  
Sbjct: 300  PMVLVNGAEGIGTGWATKVLCYNPKQVIRNVQRMIDGQPLQKMVPFYRNFTGTIKEASEG 359

Query: 913  EAGVTYTVTGIIEEVNETTLR--IKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDD 970
               ++ TVT      N   ++  I ELP+  WTQ Y+E +  ++ ++   I G+++   +
Sbjct: 360  RFHISGTVTLRPSRKNAHFIQAEITELPVGVWTQRYKEKVLDVLAKS-GIISGYKELHTE 418

Query: 971  TTVDFEVFLSEESMMRTKQEG-----LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQI 1025
              V F + L + S + +   G     L K  KL T + TS+M LFD    ++++   E+I
Sbjct: 419  NAVRFLLELPKGSGIWSSANGGRKHALHKTLKLDTVLGTSSMVLFDENNSLRRFTRIEEI 478

Query: 1026 LEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELR 1085
             E FF +R + Y +R+  Q+  L+ +L   EN+ RF+  V+N EI +  + RTD+   LR
Sbjct: 479  FELFFEVRRQKYIERRDHQIGVLDAKLRFYENQCRFVEAVLNKEITIEGKSRTDIESTLR 538

Query: 1086 QKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQ 1145
            Q+ F P P  +                   N E  N +   ++ YLL M I  L+ E+V+
Sbjct: 539  QRHFEPNPLKAP------------------NHEDGNELNKSEFSYLLDMPIIRLSNEEVK 580

Query: 1146 GLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
             L+  RD    E++ L+    + +W +DL  L +QL++ +K   R
Sbjct: 581  SLIESRDAKVTEMNMLKGKDWKDMWHEDLRNLTVQLEKDEKKRER 625


>gi|429962922|gb|ELA42466.1| hypothetical protein VICG_00565 [Vittaforma corneae ATCC 50505]
          Length = 656

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/554 (46%), Positives = 356/554 (64%), Gaps = 57/554 (10%)

Query: 644  KEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYS 703
            K+YF ++  H K F    + D E I+LAF+KKK + RK WL  F PG +LDQ    I  S
Sbjct: 3    KQYFSDLPKHVKSFSPISEPDRELIDLAFNKKKADERKSWLGDFVPGTYLDQSASNISIS 62

Query: 704  DFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSA 763
            DF+NKELILFS+AD  RSIPS++DGLKPGQRK+LF  FKRN   E KVAQ  GYVSE SA
Sbjct: 63   DFINKELILFSVADNTRSIPSIMDGLKPGQRKVLFSCFKRNLKSEIKVAQLVGYVSEQSA 122

Query: 764  YHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRF 823
            YHHGEQSL +TI+ MAQDFVGSNNINLL P G FG+R QGGKDAAS+RYI+T L+P+TR 
Sbjct: 123  YHHGEQSLCATIVNMAQDFVGSNNINLLLPIGSFGSRLQGGKDAASSRYIYTNLNPLTRL 182

Query: 824  LFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANV 883
            +F + DD +L+YL+ED  +IEP +Y+PIIP VLVNG++GIGTGWS+ IPN+NP D++ N+
Sbjct: 183  IFSEHDDPILNYLDEDNVRIEPEYYVPIIPMVLVNGADGIGTGWSTSIPNFNPLDVLKNI 242

Query: 884  RRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWT 943
            R+L+  E M+ M P+Y+ F G I + +  +    + V GI+E+++E    I ELP+  WT
Sbjct: 243  RKLMQNEKMDEMAPYYKNFRGEILRQSEGK----FVVNGIVEQLDEYNSEILELPVGTWT 298

Query: 944  QDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKF--KLTTT 1001
            Q Y+E+LE+++   +  IR +++Y  +  V+F V                KKF  K++TT
Sbjct: 299  QTYKEYLENLL--QNGVIRDYKEYHTEKKVNFLV-------------TSFKKFPLKISTT 343

Query: 1002 ISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRF 1061
            ++TSNM  FDS+G IKKY+TP +I++EF++ RL FY  RK+ +L+ ++ EL KLENK RF
Sbjct: 344  LTTSNMVCFDSEGKIKKYETPLEIIKEFYYTRLRFYTTRKEYRLKAIKEELNKLENKARF 403

Query: 1062 ILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVN 1121
            I  V+NG +V+NNR    ++ +L    F  F                             
Sbjct: 404  IREVINGRLVINNRPTDSIVRDLESMKFDRFD---------------------------- 435

Query: 1122 GVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD--- 1178
                 +++YLL M I +LT EKV+ L  + ++   E + L + +   LW +DLD  +   
Sbjct: 436  -----NFEYLLGMKISSLTKEKVEKLNKECEEKRTEYETLSRKSAYDLWSEDLDKFEAAY 490

Query: 1179 MQLDELDKSDARAE 1192
            +++ E D+++  AE
Sbjct: 491  IKVFEEDRAEYDAE 504


>gi|312086869|ref|XP_003145247.1| hypothetical protein LOAG_09672 [Loa loa]
          Length = 655

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 289/720 (40%), Positives = 432/720 (60%), Gaps = 82/720 (11%)

Query: 493  LNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWI 549
            + NSEI  + +ILGLK G  Y N   +KSLRYG L+IMTDQ                   
Sbjct: 2    VKNSEISALIRILGLKFGENYGNAEDLKSLRYGRLLIMTDQ------------------- 42

Query: 550  TTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYS 609
                     D DGSHIKGL+IN +H +WPSLLK  +++  FITP++KA  +  +V SFYS
Sbjct: 43   ---------DPDGSHIKGLIINLLHMYWPSLLK-ANYINYFITPLLKA-KRGSEVKSFYS 91

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
              DYE W+     +++ +SIKYYKGLGTS++KE +EYF +I  H  +F+++     E+I+
Sbjct: 92   TADYERWQAE-NPDSAKYSIKYYKGLGTSSAKEAREYFTDIERHTVNFIYDGKAADESID 150

Query: 670  LAFSKKKIEARKKWLLQ----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSM 725
            LAF+K K + RK W+ +         + +QK     +S+FVNKEL+ +S  DL+RS+P++
Sbjct: 151  LAFAKNKADDRKIWIAESSKLLLSSTNCNQK----TFSEFVNKELLEYSQLDLRRSLPNI 206

Query: 726  VDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGS 785
            VDG KP QRK+LF  F R    E +V+Q +G VS++  YHHGE+SL +TI+ +AQDFVGS
Sbjct: 207  VDGYKPSQRKVLFTMFGRYERDEVRVSQLAGAVSQYCGYHHGEESLVNTIIRLAQDFVGS 266

Query: 786  NNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEP 845
            NN+NLL P GQFGTR  GG+DAASARYI+T LSP+ R +FP+ DDK+L YL E+   IEP
Sbjct: 267  NNLNLLLPLGQFGTRLAGGEDAASARYIYTSLSPLARIIFPRADDKVLKYLMEENTFIEP 326

Query: 846  TWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGT 905
             WY PIIP +L+NG+EGIGTGW++ I    PR I++N +RL++G  ++ M P +R F GT
Sbjct: 327  EWYCPIIPMILINGAEGIGTGWATKILPRCPRQIISNAQRLIDGRPLQDMLPHFRKFQGT 386

Query: 906  IEKTASKEAGVTYTVTGIIEEVN-ETTLR--IKELPIRRWTQDYRE-FLESIIDQN--DS 959
            I +   ++    Y+++G I      + LR  I ELP   W   Y+E  L+SI+       
Sbjct: 387  INEITPRQ----YSISGKISYHRLRSGLRAIITELPTGIWNNKYKEKVLDSIMKSGLISY 442

Query: 960  FI-RGFRQYSDDTTVDFEVFLSEESMMRTKQE--GLLKKFKLTTTISTSNMHLFDSKGVI 1016
            FI   + +   ++ V F + + ++ ++  K++   L +  KL +  S ++M LFD K V+
Sbjct: 443  FICSSYEELHSESNVHFILHVIDKPLISDKKQIKTLNRLLKLRSVASENSMILFDEKNVL 502

Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
            +KY++   I +EFF +R + Y +R++ +L+ ++ +L  + N+VRF+  V+NGEI++  + 
Sbjct: 503  RKYNSTVDIFQEFFEVRRQKYVERREYELKAMDKKLKFIGNQVRFVNAVINGEIIIEKKN 562

Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAI 1136
            R +++ ++ +KGF   P   K          +  +E+  +P         D+ YLL M +
Sbjct: 563  RVEIVTQIIEKGFDSNPMKMK----------NTVDENRNSP---------DFAYLLDMPL 603

Query: 1137 GTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERM 1196
              L+ E++  L   R +L E    L+  T +SLW  DL+ L M LD+        EE RM
Sbjct: 604  CRLSNEEILILQEKRSELWERFKALKSTTWKSLWSMDLNLLSMALDK--------EERRM 655


>gi|448930040|gb|AGE53606.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
            GM0701.1]
          Length = 515

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/551 (48%), Positives = 356/551 (64%), Gaps = 50/551 (9%)

Query: 628  SIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQF 687
            S+   +GLGTSTS++ K YF+N+    K F W DD   E I+ +F+K + + RK WLL F
Sbjct: 12   SLNSSQGLGTSTSEDAKRYFKNLKGLTKVFGWTDDS-SELIDRSFNKSRADERKTWLLDF 70

Query: 688  EPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIK 747
            EPGN LDQ    I   DF+NKELILFS  D++RSIPS+VDGLKP QRKILF +FKRN ++
Sbjct: 71   EPGNQLDQTLTKIPVDDFLNKELILFSRYDVERSIPSVVDGLKPSQRKILFSAFKRNLVQ 130

Query: 748  EAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDA 807
            E KVAQF+GY SEH+ YHHGE SL   I+GMAQD+VGSNNINLL P GQFG+R  GGKD+
Sbjct: 131  EIKVAQFAGYTSEHAGYHHGEASLQGAIIGMAQDYVGSNNINLLVPKGQFGSRIHGGKDS 190

Query: 808  ASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGW 867
            ASARYIFT+LSP TR +F K DD LL YL +DG +IEP +Y+P IP +LVNG+ GIGTG+
Sbjct: 191  ASARYIFTQLSPNTRDIFHKADDVLLKYLEDDGDKIEPEYYVPTIPFLLVNGANGIGTGF 250

Query: 868  SSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEV 927
            S+ IP+YNP+DIV NV+R+++G+ M PM PWYRGF G+I++ +    GV +T  G+  E+
Sbjct: 251  STNIPSYNPKDIVDNVKRIIDGKAMTPMTPWYRGFKGSIKEFS---PGV-FTCNGVY-EI 305

Query: 928  NETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEV-FLSEESMMR 986
                + + ELP+  WT +Y+EFLE++I++    +  FR+  D+  V FEV F+       
Sbjct: 306  KGKMVTVSELPVGTWTSEYKEFLETLIEKK--IVADFREKHDEKHVLFEVDFIGVPDP-- 361

Query: 987  TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
                   K  KL +TI T+NMH FD  G IKKYDTP  I+ ++F  R EFY KRK+  L+
Sbjct: 362  -------KILKLESTIRTTNMHAFDPSGKIKKYDTPLDIITDWFSTRKEFYVKRKEDMLK 414

Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
            +L+  +L  +NK RFI  V +G +V+  R   D++ +L +  F                 
Sbjct: 415  DLKARVLVAQNKSRFINSVNDGSLVITRRAEEDVVKDLEKMKF----------------- 457

Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
                       + V+G     Y+YLL M I +LT E+V+ L A+   L EE+  L   T 
Sbjct: 458  -----------DRVDG----SYEYLLGMKISSLTKERVEKLRAEAAALEEELVVLENTTT 502

Query: 1167 ESLWVKDLDAL 1177
            ES+WV DL+A+
Sbjct: 503  ESMWVNDLNAI 513


>gi|448930452|gb|AGE54017.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus IL-3A]
          Length = 570

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 285/611 (46%), Positives = 382/611 (62%), Gaps = 57/611 (9%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
           YQK +Q EH+L RPDTYIGS+   T+  W+Y +    +I + ++Y P L KIFDEI+ N+
Sbjct: 4   YQKLTQREHVLARPDTYIGSVAPQTKNEWVYVDGK--IIRKDVTYPPALLKIFDEIITNS 61

Query: 91  ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
           AD   RD K+  +KV ID++   +SVHN G  +P+E H  E  Y+PELIFGHLL   N+D
Sbjct: 62  ADCYNRDKKLTVLKVCIDEKS--VSVHNDGCNIPIEKHDAEKCYIPELIFGHLLAGENFD 119

Query: 151 DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
           D+ ++T  GRNG G+K TNIFS +F +E  DGK  KKYKQ + NNM   S+P ++ C + 
Sbjct: 120 DSEQRTGAGRNGIGSKATNIFSKKFDVEICDGK--KKYKQSWENNMSVMSKPKVTTCSK- 176

Query: 211 DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
           D++   +F PD  +F +   +DD +++M +RV D+A  L K VKV LNG R+ +K+  +Y
Sbjct: 177 DSYITTTFFPDFERFGIESFDDDTMSIMVRRVYDMAAVLNK-VKVMLNGKRLEIKNTEDY 235

Query: 271 VDMYPKSVT---RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVAN 327
             +Y  + T   R  E   E W++ V+ S+ +F  VSFVN + T +GGTHV+ V + VA 
Sbjct: 236 FSLYVGNKTETKRAFEHTPENWDVAVSCSD-EFTPVSFVNSVVT-RGGTHVNAVTDAVAK 293

Query: 328 HVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE 387
            V+       K   VK   VK  ++VFVNA++ NP FDSQTKE LT R +    +  LS+
Sbjct: 294 AVVE--AAAKKKIVVKPATVKGRMFVFVNAVVVNPNFDSQTKENLTSRNA----RVTLSD 347

Query: 388 EFLKKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNS 443
            F+KK  A   +++ ++   N + S    K+LKK DG K   V GI KL DA  AG +NS
Sbjct: 348 TFVKK--AIGVLLDAVIQETNVRTSLVDQKELKKTDGAKKSRVSGIPKLNDAAWAGTKNS 405

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
           + CTLILTEGDSA  LA+AGLSVVGR+R+GVFPLRGKLLNVR+AS   +  N EI  +K+
Sbjct: 406 KMCTLILTEGDSAATLAIAGLSVVGRERYGVFPLRGKLLNVRDASVASITKNEEITALKQ 465

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGS 563
           ILGL+ G  Y +  SLRYGH+MIMTD                             D DG+
Sbjct: 466 ILGLQTGKVYKDTSSLRYGHVMIMTDA----------------------------DVDGT 497

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSMPDYEAWKESLGG 622
           HI GL++NF HS +PSLL+IP FL +FITPIV A  K GK V  FYS+PDYE W ++   
Sbjct: 498 HISGLVMNFFHSCFPSLLEIPGFLKKFITPIVVA--KKGKDVREFYSLPDYEDWVKTT-K 554

Query: 623 NASSWSIKYYK 633
           + S + IKYYK
Sbjct: 555 DYSKYQIKYYK 565


>gi|448935342|gb|AGE58893.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus NYs1]
          Length = 476

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 253/521 (48%), Positives = 332/521 (63%), Gaps = 50/521 (9%)

Query: 655  KDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFS 714
            K F+W  D  GE I+ +F+K + E RK+W+  +EPGN LD K+  +   DF++KELILFS
Sbjct: 2    KTFMWTSDS-GELIDRSFNKSRAEDRKEWMTAYEPGNQLDHKKPEVPVPDFIDKELILFS 60

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
              DL+RSIPS+VDG KP QRK+L+C+FKRN   + KVAQFSGYV+EHSAYHHGE SL  T
Sbjct: 61   RYDLERSIPSVVDGFKPSQRKVLYCAFKRNLTTDVKVAQFSGYVAEHSAYHHGEASLQGT 120

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +AQD+VGSNNIN L P GQFG+R QGGKD ASARYIFT+L+P TR +F   DD LL 
Sbjct: 121  IVNLAQDYVGSNNINWLLPEGQFGSRLQGGKDHASARYIFTKLNPKTRQVFVDTDDNLLK 180

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            YL +DG +IEP +Y+P+IP++LVNGS GIGTGWS+ IP+YNP+DIV NV+RL+ GE +  
Sbjct: 181  YLYDDGDKIEPEYYVPVIPSILVNGSSGIGTGWSTNIPSYNPKDIVDNVKRLIAGEDLVE 240

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII 954
            M PW+RGF G IE+T+    GV Y   G+    N  T+ + ELPI +WTQDY+E L+ ++
Sbjct: 241  MKPWFRGFKGKIEETS---PGV-YVTKGLYMP-NGKTITVSELPIGKWTQDYKEHLDGLL 295

Query: 955  DQNDSFIRGFRQYSDDTTVDFEV-FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
            ++    I  FR+   DT V FE+ F+   +         +   KL TTI  +NMH FD  
Sbjct: 296  EK--KIISDFREKHTDTDVLFEIDFVGNPN---------IDILKLETTIRATNMHAFDPY 344

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G IKKYDTP  I+ E+F +R + Y KRK   LE+L       +NK RFI  V +GEI++N
Sbjct: 345  GKIKKYDTPLDIIREWFGVRKDLYVKRKAYLLEDLTHRTNIAQNKYRFITMVNDGEIIIN 404

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLS 1133
             R  +D+  EL +  F                              V+G     YDYLL+
Sbjct: 405  KRNESDISAELEKLNFYK----------------------------VDG----KYDYLLN 432

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDL 1174
            M I +LTLE+ + L  +  KL +E+DDL K T   +W  DL
Sbjct: 433  MRISSLTLERAEELKRESVKLEKELDDLSKTTETEMWNNDL 473


>gi|75765928|pdb|1ZXM|A Chain A, Human Topo Iia Atpase/amp-pnp
 gi|75765929|pdb|1ZXM|B Chain B, Human Topo Iia Atpase/amp-pnp
 gi|75765930|pdb|1ZXN|A Chain A, Human Dna Topoisomerase Iia AtpaseADP
 gi|75765931|pdb|1ZXN|B Chain B, Human Dna Topoisomerase Iia AtpaseADP
 gi|75765932|pdb|1ZXN|C Chain C, Human Dna Topoisomerase Iia AtpaseADP
 gi|75765933|pdb|1ZXN|D Chain D, Human Dna Topoisomerase Iia AtpaseADP
          Length = 400

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/401 (57%), Positives = 299/401 (74%), Gaps = 13/401 (3%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 1   SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 59

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 60  ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 119

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 120 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 178

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
           K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 179 KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 237

Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            F  YVDMY K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 238 GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 297

Query: 318 VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
           VDYVA+Q+   ++ VV KKNK    VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+ 
Sbjct: 298 VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 357

Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKK 417
            SFGS C+LSE+F+K      GIVE++L+W  FK    L K
Sbjct: 358 KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNK 397


>gi|448930450|gb|AGE54015.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus IL-3A]
          Length = 479

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/525 (48%), Positives = 334/525 (63%), Gaps = 50/525 (9%)

Query: 655  KDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFS 714
            K F W  D  GE I+ +F+K + E RK+W+  +EPGN LD K+  +  SDF++KELILFS
Sbjct: 2    KTFTWTSDS-GELIDRSFNKTRAEDRKEWMTAYEPGNQLDHKKPEVPVSDFIDKELILFS 60

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
              DL+RSIPS+VDG KP QRK+L+ +FKRN   + KVAQFSGYV+EHSAYHHGE SL  T
Sbjct: 61   RYDLERSIPSVVDGFKPSQRKVLYSAFKRNLTTDVKVAQFSGYVAEHSAYHHGEVSLQGT 120

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +AQD+VGSNNIN L P GQFG+R QGGKD ASARYIFT+L+P TR +F   DD LL 
Sbjct: 121  IVNLAQDYVGSNNINWLLPEGQFGSRLQGGKDHASARYIFTKLNPKTRQVFVDTDDNLLK 180

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            YL +DG +IEP +Y+PIIP++LVNGS GIGTGWS+ IP+YNP+DIV NV+RL++GE +  
Sbjct: 181  YLYDDGDKIEPEYYVPIIPSILVNGSSGIGTGWSTNIPSYNPKDIVDNVKRLISGEDLVE 240

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII 954
            M PWYRGF G IE+T     GV Y   G+     +T + + ELP+ +WTQDY+E+L+ ++
Sbjct: 241  MKPWYRGFKGKIEETF---PGV-YVTKGLYMPKGKTIV-VSELPVGKWTQDYKEYLDGLL 295

Query: 955  DQNDSFIRGFRQYSDDTTVDFEV-FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
            ++    I  FR+   DT V FE+ F+   +         +   KL TTI ++NMH FD  
Sbjct: 296  EK--KVISDFREKHSDTDVLFEIDFVGNPN---------IDILKLETTIRSTNMHAFDPS 344

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G IKKYDTP  I+ ++F +R   Y KRK   LE+L       +NK RFI  V N EIV+N
Sbjct: 345  GKIKKYDTPLDIIRDWFEVRRNLYVKRKAYLLEDLTHRTNIAQNKHRFITMVNNDEIVIN 404

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLS 1133
             +  + +  EL +  F                              V+G     YDYLL+
Sbjct: 405  KKHESVISAELEKLNFYK----------------------------VDG----KYDYLLN 432

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
            M I +LTLE+   L  +  KLN+E+DDL K T   +W +DL +LD
Sbjct: 433  MRISSLTLERATELEREAVKLNKELDDLSKTTETDMWKQDLTSLD 477


>gi|448931888|gb|AGE55449.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus MA-1E]
          Length = 479

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/525 (48%), Positives = 334/525 (63%), Gaps = 50/525 (9%)

Query: 655  KDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFS 714
            K F W  D  GE I+ +F+K + E RK+W+  +EPGN LD K+  +   DF++KELILFS
Sbjct: 2    KTFTWTSDS-GELIDRSFNKTRAEDRKEWMTAYEPGNQLDHKKPEVPVPDFIDKELILFS 60

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
              DL+RSIPS+VDG KP QRK+L+ +FKRN   + KVAQFSGYV+EHSAYHHGE SL  T
Sbjct: 61   RYDLERSIPSVVDGFKPSQRKVLYSAFKRNLTTDVKVAQFSGYVAEHSAYHHGEVSLQGT 120

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +AQD+VGSNNIN L P GQFG+R QGGKD ASARYIFT+L+P TR +F   DD LL 
Sbjct: 121  IVNLAQDYVGSNNINWLLPEGQFGSRLQGGKDHASARYIFTKLNPKTRQVFVDTDDNLLK 180

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            YL +DG +IEP +Y+PIIP++LVNGS GIGTGWS+ IP+YNP+DIV NV+RL++GE +  
Sbjct: 181  YLYDDGDKIEPEYYVPIIPSILVNGSSGIGTGWSTNIPSYNPKDIVDNVKRLISGEDLVE 240

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII 954
            M PWYRGF G IE+T+    GV Y   G+     +T + + ELP+ +WTQDY+E+L+ ++
Sbjct: 241  MKPWYRGFKGKIEETS---PGV-YVTKGLYMPKGKTIM-VSELPVGKWTQDYKEYLDGLL 295

Query: 955  DQNDSFIRGFRQYSDDTTVDFEV-FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
            ++    I  FR+   DT V FE+ F+   +         +   KL TTI ++NMH FD  
Sbjct: 296  EK--KVISDFREKHSDTDVLFEIDFVGNPN---------IDILKLETTIRSTNMHAFDPS 344

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G IKKYDTP  I+ ++F +R   Y KRK   LE+L       +NK RFI  V N EI++N
Sbjct: 345  GKIKKYDTPLDIIRDWFEVRRNLYVKRKAYLLEDLTHRTNIAQNKHRFITMVNNDEIIIN 404

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLS 1133
             +  + +  EL +  F                              V+G     YDYLL+
Sbjct: 405  KKHESVISAELEKLNFYK----------------------------VDG----KYDYLLN 432

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
            M I +LTLE+   L  +  KLN+E+DDL K T   +W +DL +LD
Sbjct: 433  MRISSLTLERATELEREAVKLNKELDDLSKTTETDMWKQDLTSLD 477


>gi|322510995|gb|ADX06308.1| putative DNA gyrase/DNA topoisomerase IV subunit A [Organic Lake
            phycodnavirus 2]
          Length = 602

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 267/675 (39%), Positives = 388/675 (57%), Gaps = 81/675 (12%)

Query: 505  LGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSH 564
            +GL+    Y N   LRY  ++ MTDQ                            D DGSH
Sbjct: 1    MGLESNKTYKNTDELRYNKILFMTDQ----------------------------DLDGSH 32

Query: 565  IKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNA 624
            IKGL IN     WPSL+ I  FL    TPI+KAT K+GK++ FY+  +YE WK S   +A
Sbjct: 33   IKGLCINLFECLWPSLMNIEGFLGFMNTPILKAT-KSGKMIHFYNEQEYELWK-SEHQDA 90

Query: 625  SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDF-VWEDDQDGEAIELAFSKKKIEARKKW 683
              WSIKYYKGLGTST KE KEYF++    KK   +   D+D + I++ F+KKK + RK+W
Sbjct: 91   KGWSIKYYKGLGTSTGKEFKEYFKD----KKTMDIRLGDKDIDTIDMVFNKKKSDCRKEW 146

Query: 684  LLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKR 743
            L  +E  N LD ++  I   DF+++E+I FS  D  RSIP+M+DGLK  QRKIL+ +FK+
Sbjct: 147  LSNYERNNVLDTRDTKITLGDFIHREMIHFSKYDCDRSIPNMMDGLKVSQRKILYSAFKK 206

Query: 744  NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQG 803
            N + E KVAQFSGYVSEHS YHHGE SL   I+ MAQ+FVGSNNIN+L PNGQFGTR QG
Sbjct: 207  NLVHEIKVAQFSGYVSEHSGYHHGENSLNGAIVNMAQNFVGSNNINILMPNGQFGTRLQG 266

Query: 804  GKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGI 863
            GKD+AS RYIFT L+ ITR +F K+DD +L YL +DG  +EP +Y+PI+P +LVNG++GI
Sbjct: 267  GKDSASERYIFTNLNKITRMIFKKEDDAILTYLKDDGTFVEPIYYLPILPMILVNGTKGI 326

Query: 864  GTGWSSYIPNYNPRDIVANVR-RLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTG 922
            GTG+S+ IP ++P  ++  ++ +L +        P+Y+GF GTIEK   +       +T 
Sbjct: 327  GTGFSTDIPCFHPVQLINYIQHKLADKAYTRDFVPFYQGFQGTIEKDGDRRF-----ITK 381

Query: 923  IIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEE 982
                +++  + I ELPI  W +DY   LE  +D     ++ ++  S D  V F++ L + 
Sbjct: 382  GNYTIDKQVITITELPIGVWNEDYILHLEKCMD----ILKDYKDQSTDKKVYFKLTLKQP 437

Query: 983  SMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKK 1042
                 ++  L+K FKL+TT+S +NM+LFD    +K Y+   +I ++F  IRL++YEKR+ 
Sbjct: 438  ----MEESDLIKTFKLSTTLSINNMNLFDHNDKLKHYNEVYEICDDFIGIRLDYYEKRRL 493

Query: 1043 VQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAV 1102
              ++ L+ E+  L+NK  +I  ++N  + +  +   D+   L +K +T    +       
Sbjct: 494  HLIQILKEEMEVLKNKCNYINELLNDTLDLRKKTNNDICDILEKKKYTKINDS------- 546

Query: 1103 VAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
                                     Y YL+ M++ ++  E V  L    +    E D + 
Sbjct: 547  -------------------------YHYLIKMSMDSVCQENVDSLNQQLNGKQSEYDKMW 581

Query: 1163 KATPESLWVKDLDAL 1177
             ++ + +W  +L+ L
Sbjct: 582  NSSHKDIWKDELEQL 596


>gi|448931142|gb|AGE54705.1| DNA topoisomerase II [Paramecium bursaria Chlorella virus KS1B]
          Length = 479

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/525 (48%), Positives = 335/525 (63%), Gaps = 50/525 (9%)

Query: 655  KDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFS 714
            K F W D + GE I+ +F+K + E RK+W+  +EPGN LD K+  +   DF++KELILFS
Sbjct: 2    KTFTWTD-ESGELIDRSFNKSRAEDRKEWMTAYEPGNQLDHKKPEVPVPDFIDKELILFS 60

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
              DL+RSIPS+VDG KP QRK+L+ +FKRN   + KVAQFSGYV+EHSAYHHGE SL  T
Sbjct: 61   RYDLERSIPSVVDGFKPSQRKVLYSAFKRNLTTDVKVAQFSGYVAEHSAYHHGEVSLQGT 120

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +AQD+VGSNNIN L P GQFG+R QGGKD ASARYIFT+L+P TR +F   DD LL 
Sbjct: 121  IVNLAQDYVGSNNINWLLPEGQFGSRLQGGKDHASARYIFTKLNPKTRQVFVDTDDNLLK 180

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            YL +DG +IEP +Y+PIIP++LVNGS GIGTGWS+ IP+YNP+DIV NV+RL++GE +  
Sbjct: 181  YLYDDGDKIEPEYYVPIIPSILVNGSSGIGTGWSTNIPSYNPKDIVDNVKRLISGEDLVE 240

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII 954
            M PWYRGF G IE+++    GV Y   G+     +T + + ELP+ +WTQDY+E+L+ ++
Sbjct: 241  MKPWYRGFKGKIEESS---PGV-YVTKGLYMPKGKTIV-VSELPVGKWTQDYKEYLDGLL 295

Query: 955  DQNDSFIRGFRQYSDDTTVDFEV-FLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSK 1013
            ++    I  FR+   DT V FE+ F+   +         +   KL TTI ++NMH FD  
Sbjct: 296  EK--KVISDFREKHSDTDVLFEIDFVGNPN---------IDILKLETTIRSTNMHAFDPS 344

Query: 1014 GVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVN 1073
            G IKKYDTP  I+ ++F +R   Y KRK   LE+L       +NK RFI  V N EIV+N
Sbjct: 345  GKIKKYDTPLDIIRDWFEVRRNLYVKRKAYLLEDLTHRTNIAQNKHRFITMVNNDEIVIN 404

Query: 1074 NRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLS 1133
             +  + +  EL +  F                              V+G     YDYLL+
Sbjct: 405  KKHESVISAELEKLNFYK----------------------------VDG----KYDYLLN 432

Query: 1134 MAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
            M I +LTLE+   L  +  KLN+E+DDL K T   +W +DL +LD
Sbjct: 433  MRISSLTLERATELEREAVKLNKELDDLSKTTETDMWKQDLTSLD 477


>gi|448930042|gb|AGE53608.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
           GM0701.1]
          Length = 560

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 278/608 (45%), Positives = 380/608 (62%), Gaps = 59/608 (9%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
           Y K SQ +HIL R DTY+GS+ K  +  ++Y  ++  ++ +++SY P   KIFDEIL N+
Sbjct: 5   YVKLSQRDHILHRADTYVGSVAKEAREEYVYTGDA--IVKKSVSYSPAFLKIFDEILTNS 62

Query: 91  ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
           AD   R   M  +KV ID +H  +++ N G  +PVE H EEG YVPELIFGHLLT  N+D
Sbjct: 63  ADCFNRGAPMTTLKVTIDADH--VTIFNDGCSIPVEKH-EEGCYVPELIFGHLLTGENFD 119

Query: 151 DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
           D  ++T  GRNGYG+KLTNIFS +F +E  DG  + KY Q +++NM   S+P ++K  + 
Sbjct: 120 DTQERTGAGRNGYGSKLTNIFSKKFDVEIYDG--VHKYIQSWSDNMTNASKPKVTKSSKP 177

Query: 211 DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            + T  +F PD  +F M  ++ D  +++ +RV D+A  L K VK+ L+G R+ VK   +Y
Sbjct: 178 GSIT-TTFYPDFERFGMDSIDKDTRSVLVRRVYDMAAVLTK-VKIFLDGKRLDVKGAKDY 235

Query: 271 VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
            +MY ++   F E V+  W+I V  S+ +F+ VSFVN  +T +GGTHVD +AN V   V 
Sbjct: 236 FEMYTEAKPVF-ESVDG-WDIGVCPSD-EFRSVSFVNASST-RGGTHVDLIANVVTKAVA 291

Query: 331 AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
               KK     VK   VKN L+VFVNA + NP+F SQTK+ LT +      KC  S  FL
Sbjct: 292 EAALKKK--VTVKPAVVKNKLFVFVNARVVNPSFSSQTKDILTSKNV----KCSPSAAFL 345

Query: 391 KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
           KK  A S +++ +++  N ++S    K++KK DG K   + GI KL DA  AG ++S  C
Sbjct: 346 KK--AVSAVLDDVIAETNVRESLVEMKNMKKTDGAKKVRLTGIKKLTDAAWAGTKHSGMC 403

Query: 447 TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
           TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + + NN+EI  IK+ILG
Sbjct: 404 TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSITNNAEITAIKQILG 463

Query: 507 LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
           L+ G  Y +  SLRYG +M+MTD                             D DGSHI 
Sbjct: 464 LRNGTTYKDASSLRYGSVMLMTD----------------------------ADVDGSHIA 495

Query: 567 GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS-FYSMPDYEAWKESLGGNAS 625
           GL++NF H+ +PSLL+IP FL +F TPIV A  K GK +  FYS+PD+E WK++ G    
Sbjct: 496 GLVLNFFHAQFPSLLEIPGFLKKFTTPIVIA--KRGKDMKEFYSLPDFEDWKKTSG---D 550

Query: 626 SWSIKYYK 633
            WS+KY K
Sbjct: 551 KWSVKYLK 558


>gi|448925661|gb|AGE49240.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus
           Br0604L]
          Length = 562

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 279/607 (45%), Positives = 380/607 (62%), Gaps = 55/607 (9%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
           Y K SQ +HIL R DTY+GS+ K  +  ++Y  ++  ++ +++SY P   KIFDEIL N+
Sbjct: 5   YVKLSQRDHILHRSDTYVGSVAKEAREEYVYTGDA--IVKKSVSYSPAFLKIFDEILTNS 62

Query: 91  ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
           AD   R   M  +KV ID +H  +++ N G  +PVE H EEG YVPELIFGHLLT  N+D
Sbjct: 63  ADCFNRGAPMTTLKVTIDADH--VTIFNDGCSIPVEKH-EEGCYVPELIFGHLLTGENFD 119

Query: 151 DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
           D  ++T  GRNGYG+KLTNIFS +F +E  DG    KY Q +++NM   S+P ++K  + 
Sbjct: 120 DTQERTGAGRNGYGSKLTNIFSKKFDVEIYDGTH--KYIQSWSDNMTNASKPKVTKSSKP 177

Query: 211 DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            + T  +F PD  +F M  +++D  +++ +RV D+A  L K VK+ L+G R+ VK   +Y
Sbjct: 178 GSIT-TTFYPDFERFGMDSIDEDTRSVLVRRVYDMAAVLTK-VKIFLDGKRLDVKGAKDY 235

Query: 271 VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
            +MY  +   F     + W+I V  S+ +F+ VSFVN  +T +GGTHVD +AN VA  V 
Sbjct: 236 FEMYTDAKPVFE--TADGWDIGVCPSD-EFRSVSFVNASST-RGGTHVDLIANAVAKAVA 291

Query: 331 AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
                  K   VK   VKN L+VFVNA + NP+F SQTK+ LT +      KC  S  FL
Sbjct: 292 E--AALKKKVTVKPAVVKNKLFVFVNARVVNPSFSSQTKDILTSKNV----KCSPSAVFL 345

Query: 391 KKVTAKSGIVETLLSWANFKQS----KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
           KK  A S +++ +++  N ++S    K++KK DGTK   + GI KL DA  AG +NS  C
Sbjct: 346 KK--AVSAVLDDVVAETNVRESLVEMKNIKKTDGTKKVRLTGIKKLTDAAWAGSKNSGLC 403

Query: 447 TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
           TLILTEGDSA  LA AGL+VVGR+R+G+FPLRGKLLNVR+AS + + NN+EI  IK+ILG
Sbjct: 404 TLILTEGDSAATLATAGLAVVGRERYGIFPLRGKLLNVRDASVSSITNNAEITAIKQILG 463

Query: 507 LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
           L+ GV Y +  SLRYG +MIM+D                            QD DGSHI 
Sbjct: 464 LRNGVNYKDASSLRYGSVMIMSD----------------------------QDVDGSHIA 495

Query: 567 GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
           GL++NF H+ +PSLL+IP FL  F+TPIV A  K  K++ FYS+PD+E WK +   + S+
Sbjct: 496 GLVLNFFHAQFPSLLEIPGFLKRFVTPIVVA-KKGAKMVEFYSIPDFEEWKAAT-PDVST 553

Query: 627 WSIKYYK 633
           W  KYYK
Sbjct: 554 WKTKYYK 560


>gi|221110139|ref|XP_002163496.1| PREDICTED: DNA topoisomerase 2-like [Hydra magnipapillata]
          Length = 1315

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 271/681 (39%), Positives = 412/681 (60%), Gaps = 76/681 (11%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEI 86
           +E++Y   +  +HIL  PDTYIG+       ++I++E++  +I   I+YV G +K FDEI
Sbjct: 44  VEDVYDGMTLHQHILSAPDTYIGTTTVDEVRMFIFDEDNNKIIEDVINYVAGFFKTFDEI 103

Query: 87  LVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
           LVNA D+  RD     +++ ID++   I+V N G+G+PV IH++  +YVPE+IFG+LLTS
Sbjct: 104 LVNARDHTVRDKTCKNIQITIDRDTGRITVWNDGNGIPVSIHKKYNIYVPEMIFGNLLTS 163

Query: 147 SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET--------ADGKRLK-------KYKQV 191
            NY     KT GG+NGYGAKL NI+S EF I T         DGK +        +Y+Q 
Sbjct: 164 QNYG-KKGKTVGGKNGYGAKLCNIYSKEFEIHTIGVDKIKEVDGKIVPDENAKKVEYRQT 222

Query: 192 FTNNMGKKSEPNISK--CKEGDNWTKVSFKPDLAKFNMT-HLEDDVVALMKKRVVDLAGC 248
           F NNM    +P+I+K   +    +T++S+ PD  K+ M   L +D+ +L+ KR  D+A C
Sbjct: 223 FKNNMYDVGKPDINKKISQSSKQFTQISYIPDYEKYGMNGRLTNDMYSLLVKRCYDIAAC 282

Query: 249 LGKSVKVELNGHRVPVKSFAEYVDMY----PKSVTRF-HERVNERWEICVTLSEGQFQQ- 302
              +V + +NG  +  + F +Y+ +Y    PK   +  +E+VN+RWEI +  ++    + 
Sbjct: 283 TPSTVNISVNGCNIKCRKFEDYIRLYYSDDPKEKPKITYEKVNDRWEIGIGFNKNVGDRY 342

Query: 303 VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNAN--VKAHNVKNHLWVFVNALID 360
           +SFVNGI+T +GGTHV +V N V   V A + KK ++ +  +    +K +L  F+N +++
Sbjct: 343 ISFVNGISTFQGGTHVSHVVNNVVAKVTAFIKKKKEHKDLKIIPATIKQYLTFFINCVVE 402

Query: 361 NPAFDSQTKETLTLRQSSFGS--------KCELSEEFLKKVTAKSGIVETLLSWANFKQS 412
           +P F+SQTKE +  + + + +        KCELS+EF++K+   +G++  +++ + FK+ 
Sbjct: 403 DPGFNSQTKEYMNSKVADWCTCGNMCKDVKCELSDEFIEKLCG-NGLMTEVVNMSKFKEM 461

Query: 413 KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF 472
           +DL K DG K   ++ I KL+DA  AGG+ S + ++  TEGDSA++  + G+SV+G++R+
Sbjct: 462 RDLDKTDGKKVGKLK-IPKLKDALWAGGKKSAKTSIFFTEGDSAQSFVIDGISVIGQERY 520

Query: 473 GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVL 532
           GVFPLRGKLLNVR A++ Q+ +N+E  NIKKILGLKQGV+Y +V  LRYG ++I+TDQ  
Sbjct: 521 GVFPLRGKLLNVRNATAKQIKSNTEFLNIKKILGLKQGVKYKDVSKLRYGSVIIITDQ-- 578

Query: 533 LAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFIT 592
                                     D DGSHIKGL+IN +  FWP LL+I  F+  + T
Sbjct: 579 --------------------------DPDGSHIKGLIINMLEYFWPELLQIDGFIKAYNT 612

Query: 593 PIV----KATNKNGKVLSFYSMPDYEAWKE-----SLGGNASSWSIKYYKGLGTSTSKEG 643
           PIV    K   K   V  FYSM ++E W++      + GN   W  KYYKGLGTS++KE 
Sbjct: 613 PIVKAWKKTDKKKASVKQFYSMSEFEKWRDVEMKGDIKGNG--WEYKYYKGLGTSSNKES 670

Query: 644 KEYFQNITLHKKDFVWEDDQD 664
           KE F++   +   F+WE + D
Sbjct: 671 KESFKDFDNNLTTFLWEHEDD 691



 Score =  326 bits (836), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 196/527 (37%), Positives = 292/527 (55%), Gaps = 50/527 (9%)

Query: 654  KKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKY-IKYSDFVNKELIL 712
            ++ F +   +   AI  AF    +  RK+WL +F   N L+ K K  I YSDF++K+LI 
Sbjct: 767  RQSFTYMKSKSHAAITKAFDGSLVNLRKEWLQKFVKSNLLEYKPKMQIPYSDFIDKDLIF 826

Query: 713  FSMADLQRSIPSMVDGLKPGQRKILFCSFKRN-FIKEAKVAQFSGYVSEHSAYHHGEQSL 771
            FS  D  RSIPSM+DG KP QR IL+C FKR    KE KV+Q +GYVSE++ YHHGE SL
Sbjct: 827  FSNVDNDRSIPSMIDGFKPSQRMILYCCFKRGRHSKEVKVSQLAGYVSENTDYHHGEASL 886

Query: 772  ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
               I+GMAQ+F GSNNIN+L PNG FG R +GGK+ AS RYIFT L PI  ++F ++DD+
Sbjct: 887  QGAIIGMAQNFPGSNNINILVPNGNFGYRRKGGKEHASPRYIFTELHPIANYIFREEDDE 946

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            +L Y  +D  ++EP  + PIIP  ++NGS+GIGTG+S+ +P +NP D+VAN++RL+N + 
Sbjct: 947  ILKYNYDDDMKVEPDVFAPIIPLGIINGSQGIGTGFSNNVPPHNPLDVVANLKRLINEKD 1006

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPI-RRWTQDYREFL 950
               M PWY GF GTIEK    +A   Y + G    ++   + I+++PI   W + Y   +
Sbjct: 1007 PVDMLPWYNGFKGTIEKNP--KATNKYIIRGKY-CIDGNKIHIEDIPIVNGWIEPYESKM 1063

Query: 951  ESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
            E              Q  DD           + + +T    L K   +T ++S +N+++F
Sbjct: 1064 E--------------QKEDDGQ-------ELQKLYKTGVGNLDKFLNMTQSLSVTNLNMF 1102

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
            +SKG + KY++   +L EF+  RLE Y+KRK+     L+ +L     KV+FI   +   I
Sbjct: 1103 NSKGKMTKYNSISDVLYEFYEYRLEMYQKRKEFFFLKLQNDLDISTYKVKFIREYLAKTI 1162

Query: 1071 VVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
             +  +K  +++ +L  KG   +PK +      +A  +                    Y Y
Sbjct: 1163 KIAKKKVVEVIAQLETKG---YPKMASDHRLPMASRS--------------------YRY 1199

Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            L  M+I TLT +K++ L  + +      D       + +W+ +LD  
Sbjct: 1200 LTDMSIMTLTDDKIKELENNMEHCQMLYDQYLNTPIKKIWLNELDEF 1246


>gi|7242880|dbj|BAA92528.1| type II DNA topoisomerase [Pyropia tenera]
 gi|7768587|dbj|BAA95458.1| type II DNA topoisomerase [Pyropia yezoensis]
          Length = 402

 Score =  451 bits (1159), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 223/401 (55%), Positives = 290/401 (72%), Gaps = 6/401 (1%)

Query: 114 ISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFST 173
           +SV N+G G+PV +H +EGVYVPELIFGHLLTSSNYDD  KK  GGRNGYGAKL NIFST
Sbjct: 4   VSVWNNGAGIPVAMHAKEGVYVPELIFGHLLTSSNYDDGEKKVVGGRNGYGAKLANIFST 63

Query: 174 EFIIETADGKRLKKYKQVFTNNMGKKSEPNI-SKCKEGDNWTKVSFKPDLAKFNMTHLED 232
            F++ETAD    K YKQ F  NM  +  P I +  K  D WT+++F+PDLAKF M  L +
Sbjct: 64  RFVVETADASSGKTYKQTFKRNMMDRGTPAIRASAKPRDTWTRITFEPDLAKFGMDRLNE 123

Query: 233 DVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY---PKSVTRFHERVNERW 289
           D VA+++ RVVD+AG +   + V LNG ++ + SF +YVD++        R H+  + RW
Sbjct: 124 DAVAVLQMRVVDMAGVV-PGIAVYLNGAKLKINSFKQYVDLHLADAPDAPRIHDATSGRW 182

Query: 290 EICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKN 349
           E+ V+LS+GQ  Q SFVN IAT KGGTHV++VA+Q+ + +   + KK+K   VK   +K+
Sbjct: 183 EVVVSLSDGQLTQTSFVNSIATTKGGTHVNHVADQLVSRIQEHIAKKHKTLKVKPFQIKS 242

Query: 350 HLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANF 409
            L ++V  L++NPAFDSQTKE LT R +SFGSK    +   K +  KSG+VE++LS A  
Sbjct: 243 QLSIYVKCLVENPAFDSQTKEMLTSRPASFGSKWVCPDRMAKDLI-KSGVVESVLSLAES 301

Query: 410 KQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGR 469
           +Q K+L K DG K   V GI KL+DANLAG R+S +CTLILTEGDSAKALA++GLSVVGR
Sbjct: 302 RQVKELAKTDGGKRARVSGIPKLDDANLAGTRDSAKCTLILTEGDSAKALAISGLSVVGR 361

Query: 470 DRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQG 510
           D +GVFPLRGKLLNVREA+  Q+++N+EI N+KKI+GL+ G
Sbjct: 362 DYYGVFPLRGKLLNVREATHKQIMDNAEITNLKKIIGLQHG 402


>gi|340378393|ref|XP_003387712.1| PREDICTED: DNA topoisomerase 2-beta-like [Amphimedon queenslandica]
          Length = 996

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/485 (48%), Positives = 311/485 (64%), Gaps = 22/485 (4%)

Query: 709  ELILFSMADLQRSIPSM-------VDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEH 761
            +L  F M+ L + I S+       + GLKPGQRK+LF  FKRN  ++ KVAQ +G V+EH
Sbjct: 208  DLAKFKMSHLNKDIVSLMTRRAYDIAGLKPGQRKVLFTCFKRNDKRDIKVAQLAGSVAEH 267

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
            SAYHHGEQSL +TI+ +AQDFVGSNNIN+LQP GQFGTR  GGKDAAS RYIFT LSP+ 
Sbjct: 268  SAYHHGEQSLMATIINLAQDFVGSNNINILQPIGQFGTRLHGGKDAASPRYIFTMLSPLA 327

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            R LFP  DD LLD+L +D Q IEP WY PIIP VLVNG+EGIGTG+S+ +PNYNPR+IVA
Sbjct: 328  RHLFPACDDVLLDHLYDDNQCIEPEWYCPIIPMVLVNGAEGIGTGYSTSVPNYNPREIVA 387

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
            N++R+LNG   E M PWY+ F GTI      +    Y V G +  +   +  I ELPI+ 
Sbjct: 388  NIKRMLNGMEPEGMKPWYKNFCGTIAPVEPHK----YMVFGQVGLLGSNSFEITELPIKT 443

Query: 942  WTQDYRE-FLESIIDQNDS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFK 997
            WTQ Y+E  LE ++  ND    FI  +++Y  D TV F V LS E M   +  G+ KKFK
Sbjct: 444  WTQTYKENVLEGLLYGNDKTSPFISDYKEYHTDVTVRFVVTLSPEKMEEAQSAGIHKKFK 503

Query: 998  LTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLEN 1057
            L + IST NM LFDS G +KKY    +IL+EF+ +RL  Y KRK+  +  L  E L+L+N
Sbjct: 504  LVSNISTGNMILFDSNGCLKKYYGEIEILKEFYDVRLALYHKRKEYLVGKLTAESLRLQN 563

Query: 1058 KVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENP 1117
            + RFI  ++  ++++  + +  ++ EL  KG+     +S  ++A     +D+    EE+ 
Sbjct: 564  QARFITEIIERKLIIERKSKNTVISELESKGY-----DSDPVKAWKKSVSDQPTVEEEDI 618

Query: 1118 EVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            E  N    +DY+YLLSM   ++T EK + LL  RDK  EE+++L+  +   LW  DLD+ 
Sbjct: 619  E--NTDNGLDYNYLLSMQFWSVTKEKAEELLQTRDKKVEELEELKGKSATDLWKIDLDSF 676

Query: 1178 DMQLD 1182
               LD
Sbjct: 677  LTCLD 681



 Score =  288 bits (738), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 132/222 (59%), Positives = 176/222 (79%), Gaps = 2/222 (0%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPD+Y+GS+E+ +  LW+Y++E   ++ R I+YVPGLYKIFDE
Sbjct: 15  SVERIYQKKTQLEHILLRPDSYVGSVEEASDLLWVYDDERNAIVQRQITYVPGLYKIFDE 74

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRD KM+ +K+VID E+++ISV N+G G+PVE+H  E  YVPELIFG LLT
Sbjct: 75  ILVNAADNKQRDSKMNTIKIVIDPENNVISVWNNGAGIPVEMHAVEKKYVPELIFGTLLT 134

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSN++D+ KK TGGRNGYGAKL NIFSTEF +ETA     K++KQ + NNM    +  ++
Sbjct: 135 SSNFNDDQKKVTGGRNGYGAKLCNIFSTEFTVETASSASGKQFKQTWQNNMDVAGKNTVT 194

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
             K+  ++TK++FKPDLAKF M+HL  D+V+LM +R  D+AG
Sbjct: 195 VSKK--DFTKITFKPDLAKFKMSHLNKDIVSLMTRRAYDIAG 234


>gi|68062299|ref|XP_673155.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56490797|emb|CAI02100.1| hypothetical protein PB300551.00.0 [Plasmodium berghei]
          Length = 426

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/451 (52%), Positives = 299/451 (66%), Gaps = 40/451 (8%)

Query: 274 YPKSVTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAV 332
           Y + + + HE+   RWEI ++ ++G QFQQVSFVN I T KGGTHV Y+ +Q+ N +   
Sbjct: 9   YEEEIVKIHEK-QHRWEIVISKTDGSQFQQVSFVNSICTTKGGTHVSYIVDQLLNSLSKK 67

Query: 333 VNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLK 391
            N KNK    +K+ +++NHLWVFVN LI NP FDSQTKETLT +QS FGSKC L+++ + 
Sbjct: 68  ANAKNKGGMEIKSGHIRNHLWVFVNCLIVNPTFDSQTKETLTTKQSKFGSKCILTDKTIN 127

Query: 392 KVTAKSGIVETLLSWANFKQSKDLKK----NDGTKTEDVRGISKLEDANLAGGRNSEQCT 447
            V  KS I+  +L WA  K   +L+K          E + GI KLEDAN AG + S++CT
Sbjct: 128 NV-LKSSILSNILLWAQAKAQVELRKKMKAGSSKARERIIGIPKLEDANDAGSKYSQECT 186

Query: 448 LILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGL 507
           LILTEGDSAK   +AGLS+VGRDR+GVFPL+GKLLNVR+AS  Q+++N EI NI KI+GL
Sbjct: 187 LILTEGDSAKTSCLAGLSIVGRDRYGVFPLKGKLLNVRDASFKQLMDNKEIQNIFKIMGL 246

Query: 508 K-QGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
                   ++K LRYG LMIMTD                            QD+DGSHIK
Sbjct: 247 DITDKNKQDIKGLRYGSLMIMTD----------------------------QDYDGSHIK 278

Query: 567 GLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS 626
           GLLIN IH FWPSLLK   FL EF+TPIVK   K  + LSF+++ +YE WKE+   N   
Sbjct: 279 GLLINMIHKFWPSLLKHKGFLCEFVTPIVKV-QKGNQELSFFTIAEYEQWKENT--NLVG 335

Query: 627 WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
           W IKYYKGLGTST KE K+YF +I  HK  F+W  D+DG++I++AFSKK+IE RK WL  
Sbjct: 336 WKIKYYKGLGTSTDKEFKQYFSDIQSHKIVFLWTGDRDGDSIDMAFSKKRIEDRKLWLQN 395

Query: 687 FEPGNHLDQKEKYIKYSDFVNKELILFSMAD 717
           F  G+++D KEK + Y DFVNKELI +S  D
Sbjct: 396 FILGSYVDHKEKDLSYYDFVNKELIYYSRYD 426


>gi|7242882|dbj|BAA92529.1| type II DNA topoisomerase [Bangia atropurpurea]
          Length = 402

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/401 (55%), Positives = 295/401 (73%), Gaps = 6/401 (1%)

Query: 114 ISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFST 173
           +SV N+G G+PV +H +EGVYVPELIFGHLLTSSNYDD  KK  GGRNGYGAKL NIFST
Sbjct: 4   VSVWNNGAGIPVAMHAKEGVYVPELIFGHLLTSSNYDDGEKKVVGGRNGYGAKLANIFST 63

Query: 174 EFIIETADGKRLKKYKQVFTNNMGKKSEPNI-SKCKEGDNWTKVSFKPDLAKFNMTHLED 232
            F++ETAD    K YKQ FT NM  +  P+I +  K  D WT+++F+PDL KF+M  L+ 
Sbjct: 64  RFVVETADAASGKTYKQTFTRNMMDRGAPSIRASAKPKDAWTRITFEPDLPKFHMAALDA 123

Query: 233 DVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY---PKSVTRFHERVNERW 289
           D VA+++ RVVD+AG +   + V LNG R+ V++F++YV ++        R H+  + RW
Sbjct: 124 DAVAVLQMRVVDMAGVV-PGIGVYLNGARLKVRNFSQYVALHLADAPDAPRIHDDASGRW 182

Query: 290 EICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKN 349
           E+ V+LS+GQ QQ SFVN I+T KGGTHV +VA+Q+ + +   + K++K   VK   +K+
Sbjct: 183 EVVVSLSDGQMQQTSFVNSISTTKGGTHVTHVADQLVSRIQEHIAKRHKTLKVKPFQIKS 242

Query: 350 HLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANF 409
            L +FV  L++NPAFDSQTKE LT R S+FGSK    ++  + +  KSG+VE++LS A  
Sbjct: 243 QLSIFVKCLVENPAFDSQTKEMLTSRPSTFGSKWVCPDKMARDLM-KSGVVESVLSLAES 301

Query: 410 KQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGR 469
           +QSK+L K DG K   V GI+KL+DAN AG R+S +CTLILTEGDSAKALA++GLSV+GR
Sbjct: 302 RQSKELAKTDGGKRARVTGIAKLDDANQAGTRDSAKCTLILTEGDSAKALAISGLSVLGR 361

Query: 470 DRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQG 510
           D +GVFPLRGKLLNVREA+  Q+++N+EI N+KKI+GL+ G
Sbjct: 362 DYYGVFPLRGKLLNVREATHKQIMDNAEITNLKKIIGLQHG 402


>gi|452818404|gb|EME25761.1| DNA topoisomerase II, partial [Galdieria sulphuraria]
          Length = 782

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 301/866 (34%), Positives = 452/866 (52%), Gaps = 100/866 (11%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
           Y++     H+L  PDTY+GSIE + +  W+   + K +  +TI+   GL ++F E L NA
Sbjct: 5   YRRLDHRTHVLEIPDTYVGSIEPYPRKEWLMSVDGK-ISSQTITLPSGLERLFIEALSNA 63

Query: 91  ADNKQRDPKMDAVKVVIDQEHDLISVHN-SGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
            D+  R      + V++  +   I + N  G G+P+    ++ +YVPELIFG LLTSSNY
Sbjct: 64  VDDLNRAANRQGI-VIVQCDPFFIEIENRGGKGIPL-TKWDDSLYVPELIFGELLTSSNY 121

Query: 150 DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKC-- 207
            +  ++   GRNG+G KL NIFST+  +   D K    Y+Q + NNM  K+    SK   
Sbjct: 122 TE--ERYYSGRNGFGIKLCNIFSTKLSVRIIDSKG-SCYEQSWENNMAVKNPITWSKVSK 178

Query: 208 KEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD---LAGCLGKSVKVELNGHRVPV 264
           KEG +   V F P+ ++F      ++ + + ++ V++   + GC       E +  RV +
Sbjct: 179 KEGPS-VIVRFYPEFSRFKKECFSEEDLGVFRRHVLEASLVTGCTCLFNNFEFS--RVTL 235

Query: 265 KSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQ 324
            S+AE    YP +   F    NE       L++ Q   VSFVNGI TI  GTHVD +  +
Sbjct: 236 HSYAEKFVDYPITAV-FSSGNNE-----TLLTDQQGLCVSFVNGIRTIDDGTHVDALLKE 289

Query: 325 VANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE 384
           +    + +  KK     + A  +K    +F++  + NP F++QTK+ L        +   
Sbjct: 290 LKTS-LGITTKK-----IFATAIKAKFGIFLSIRVKNPKFNAQTKDRLV-----GPADIP 338

Query: 385 LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRG----ISKLEDANLAGG 440
           LS   LK         + L +W  F + K   +          G    I  L+DAN AG 
Sbjct: 339 LS---LK--------TKELKNWPYFLEVKSFLEQSKVPKTAAAGHKLQIKDLDDANWAG- 386

Query: 441 RNSEQCTLILTEGDSAKALAMAGLSV-VGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
           +  E+CTL+LTEG SA + A+  +S    RD +GVFPLRGK+LNV +  S     + EIG
Sbjct: 387 KQPEKCTLLLTEGKSAMSYAVKAISFHASRDMYGVFPLRGKVLNVADDKST----SREIG 442

Query: 500 NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
            ++K LGL QG        LRYG ++++ D                             D
Sbjct: 443 LVEKALGLPQG-------PLRYGRVVVLADS----------------------------D 467

Query: 560 HDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKE 618
            DG HI  L++N+  + +P LLK  P FL    TPI+KAT    K  +FYS  ++  W +
Sbjct: 468 LDGKHILALILNWFATKYPHLLKQHPPFLGFLRTPIIKATRGQTKK-NFYSEEEFRLWPD 526

Query: 619 SLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIE 678
           +      SW I+Y KGLG+S+ ++ +E F         F    +QD + IE AF K ++ 
Sbjct: 527 A---QDRSWKIRYLKGLGSSSDQDIREDFAEDRFEY--FTINGEQDIKTIEEAFRKTQVA 581

Query: 679 ARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 738
            RK+W+L     N L +         F+ +EL+ +S   + RSIPS  DGLK  QRK L+
Sbjct: 582 VRKEWIL-----NPLSETRSDSVICRFIQQELVEYSKETISRSIPSFFDGLKESQRKALW 636

Query: 739 CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFG 798
            SF+       KVAQ + + ++ + Y HGE  L+  I+ +AQDFVG+NN++  + +GQ G
Sbjct: 637 SSFQFASKGAVKVAQLAAHAAKITNYKHGEGCLSDVIIRLAQDFVGANNLSFFESHGQTG 696

Query: 799 TRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVN 858
           +R  GG DAAS RY++ +L+ I  ++FP+ DD  L    EDG+Q+EP + +PIIP  LVN
Sbjct: 697 SRYYGGADAASERYVYVKLAKIVPYIFPQQDDFQLPAKMEDGEQVEPEFLLPIIPLALVN 756

Query: 859 GSEGIGTGWSSYIPNYNPRDIVANVR 884
           G  GI TG+ ++IP ++P  +V  V+
Sbjct: 757 GVSGIATGFRTWIPPHDPLTVVQLVK 782


>gi|11559433|dbj|BAB18783.1| type II DNA topoisomerase [Pyropia onoi]
          Length = 382

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/383 (55%), Positives = 275/383 (71%), Gaps = 6/383 (1%)

Query: 120 GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
           G G+PV +H +EGVYVPELIFGHLLTSSNYDD  KK  GGRNGYGAKL NIFST F++ET
Sbjct: 1   GAGIPVAMHAKEGVYVPELIFGHLLTSSNYDDGEKKVVGGRNGYGAKLANIFSTRFVVET 60

Query: 180 ADGKRLKKYKQVFTNNMGKKSEPNI-SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALM 238
           AD    K YKQ F  NM  +  P I +  K  D WT+++F+PDLAKF M  L +D VA++
Sbjct: 61  ADASSGKTYKQTFKRNMMDRGTPAIRASAKPRDTWTRITFEPDLAKFGMDSLNEDAVAVL 120

Query: 239 KKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY---PKSVTRFHERVNERWEICVTL 295
           + RVVD+AG +   + V LNG ++ + SF +YVD++        R H+  + RWE+ V+L
Sbjct: 121 QMRVVDMAGVV-PGIAVYLNGTKLKINSFKQYVDLHLADAPDAPRIHDATSGRWEVVVSL 179

Query: 296 SEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFV 355
           S+GQ  Q SFVN IAT KGGTHV++VA+Q+ + +   + KK+K   VK   +K+ L ++V
Sbjct: 180 SDGQLTQTSFVNSIATTKGGTHVNHVADQLVSRIQEHIAKKHKTLKVKPFQIKSQLSIYV 239

Query: 356 NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
             L++NPAFDSQTKE LT R +SFGSK    +   K +  KSG+VE++LS A  +Q K+L
Sbjct: 240 KCLVENPAFDSQTKEMLTSRPASFGSKWVCPDRMAKDLI-KSGVVESVLSLAESRQVKEL 298

Query: 416 KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVF 475
            K DG K   V GI KL+DANLAG R+S +CTLILTEGDSAKALA++GLSVVGRD +GVF
Sbjct: 299 AKTDGGKRARVSGIPKLDDANLAGTRDSAKCTLILTEGDSAKALAISGLSVVGRDYYGVF 358

Query: 476 PLRGKLLNVREASSNQVLNNSEI 498
           PLRGKLLNVREA+  Q+++N+EI
Sbjct: 359 PLRGKLLNVREATHKQIMDNAEI 381


>gi|358422130|ref|XP_002703368.2| PREDICTED: DNA topoisomerase 2-beta, partial [Bos taurus]
          Length = 878

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 222/471 (47%), Positives = 310/471 (65%), Gaps = 12/471 (2%)

Query: 729  LKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNI 788
             KPGQRK+LF  FKRN  +E KVAQ +G V+E SAYHHGEQ+L  TI+ +AQ+FVGSNNI
Sbjct: 1    FKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNI 60

Query: 789  NLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWY 848
            NLLQP GQFGTR  GGKDAAS RYIFT LS + R LFP  DD LL +L +D Q++EP WY
Sbjct: 61   NLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDDNQRVEPEWY 120

Query: 849  MPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK 908
            +PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L+G    PM P Y+ F GTI++
Sbjct: 121  IPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYKNFKGTIQE 180

Query: 909  TASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQNDSFIRGF 964
                +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++   D+  + I  +
Sbjct: 181  LGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDKTPALISDY 236

Query: 965  RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
            ++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD  G +KKY+T + 
Sbjct: 237  KEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYETVQD 296

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I + NR + DL+  L
Sbjct: 297  ILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLIQML 356

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMAIGTLTLEK 1143
             Q+G+   P  +       A   +E++   ++    +G  S  D++Y+L+M++ +LT EK
Sbjct: 357  VQRGYESDPVKAWKEAQEKAAEEEESQNQHDDSSSDSGTPSGPDFNYILNMSLWSLTKEK 416

Query: 1144 VQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
            V+ L+  RD    EV DL++ +P  LW +DL A    ++ELDK +A+  E+
Sbjct: 417  VEELIKQRDAKGREVSDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 464


>gi|11559435|dbj|BAB18784.1| type II DNA topoisomerase [Pyropia tenera]
          Length = 382

 Score =  421 bits (1082), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/383 (54%), Positives = 270/383 (70%), Gaps = 6/383 (1%)

Query: 120 GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
           G G+PV +H +EGVYVPELIFGHLLTSSNYDD  KK  GGRNGYGAKL NIFST F++ET
Sbjct: 1   GAGIPVAMHAKEGVYVPELIFGHLLTSSNYDDGEKKVVGGRNGYGAKLANIFSTRFVVET 60

Query: 180 ADGKRLKKYKQVFTNNMGKKSEPNI-SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALM 238
           AD    K YKQ F  NM  +  P I +  K  D WT+++F+PDLAKF M  L +D VA++
Sbjct: 61  ADASSGKTYKQTFKRNMMDRGTPAIRASAKPRDTWTRITFEPDLAKFGMDSLNEDAVAVL 120

Query: 239 KKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY---PKSVTRFHERVNERWEICVTL 295
           + RVVD+AG +   + V LNG ++ + SF +YVD++        R H+  + RWE+ V+L
Sbjct: 121 QMRVVDMAGVV-PGIAVYLNGTKLKINSFKQYVDLHLADAPDAPRIHDATSGRWEVVVSL 179

Query: 296 SEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFV 355
            +GQ  Q SFVN IAT KGGTH ++   Q+ + +   + KK+K   VK   +K+ L ++V
Sbjct: 180 IDGQLTQTSFVNSIATTKGGTHFNHDGGQLVSRIQEHIAKKHKTLKVKPFQIKSQLSIYV 239

Query: 356 NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
             L++NPAFDSQTKE LT R +SFGSK    +   K +  KSG+VE++LS A  +Q K+L
Sbjct: 240 KCLVENPAFDSQTKEMLTSRPASFGSKWVCPDRMAKDLI-KSGVVESVLSLAESQQVKEL 298

Query: 416 KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVF 475
            K DG K   V GI KL+DANLAG R+S +CTLILTEGDSAKALA++GLSVVGRD +GVF
Sbjct: 299 AKTDGGKRARVSGIPKLDDANLAGTRDSAKCTLILTEGDSAKALAISGLSVVGRDYYGVF 358

Query: 476 PLRGKLLNVREASSNQVLNNSEI 498
           PLRGKLLNVREA+  Q+++N+EI
Sbjct: 359 PLRGKLLNVREATHKQIMDNAEI 381


>gi|32813238|emb|CAE11801.1| topoisomerase II [Leishmania panamensis]
          Length = 345

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 209/373 (56%), Positives = 258/373 (69%), Gaps = 36/373 (9%)

Query: 451 TEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQG 510
           TEGDSAK L  AGL+V  RD FGVFPLRGK LNVREAS  ++    EI  + KI+GL   
Sbjct: 1   TEGDSAKTLCTAGLAVKDRDYFGVFPLRGKPLNVREASLKKLAACEEIQCVMKIMGLDIR 60

Query: 511 VEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLI 570
            +Y N   LRYGHLMIM+DQ                            DHDGSHIKGLLI
Sbjct: 61  QKYENTDGLRYGHLMIMSDQ----------------------------DHDGSHIKGLLI 92

Query: 571 NFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLSFYSMPDYEAWKESLGGNASS 626
           NFIH FWP+LL++P FL +FITPIVKA  K     GK +SF+SMPDY  WK+++G N S+
Sbjct: 93  NFIHCFWPNLLRVPGFLQQFITPIVKARPKGRGGAGKAISFFSMPDYFEWKKAIGDNLSN 152

Query: 627 WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
           + I+YYKGLGTS ++EG+EYF+NI  H+  FV +D  + + I +AF K ++E RK+W+  
Sbjct: 153 YQIRYYKGLGTSGAEEGREYFENIDRHRLSFVEQDQSEEDRIVMAFGKDRVEDRKEWITN 212

Query: 687 FEPGNHLDQKEKY----IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
           F+   ++++   Y    + Y DFV+KELILFS+AD +RSIPS +DG KPGQRKILF  FK
Sbjct: 213 FKTNVNVNESMDYSVRQVSYRDFVDKELILFSIADCERSIPSAIDGFKPGQRKILFSCFK 272

Query: 743 RNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQ 802
           RN +   KV Q +GYVSEHSAYHHGEQSL  TI+GMAQDFVGSNN+ LL+ +GQFGTR  
Sbjct: 273 RNLVNSIKVVQLAGYVSEHSAYHHGEQSLVQTIVGMAQDFVGSNNVPLLRKDGQFGTRLH 332

Query: 803 GGKDAASARYIFT 815
           GGKD A+ RYIFT
Sbjct: 333 GGKDHAAPRYIFT 345


>gi|385301381|gb|EIF45573.1| dna topoisomerase ii [Dekkera bruxellensis AWRI1499]
          Length = 407

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/411 (51%), Positives = 278/411 (67%), Gaps = 7/411 (1%)

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
            MP+YE W+++  G   S+  KYYKGLGTS+ +E +EYF  +  H K F   ++ D   I 
Sbjct: 1    MPEYEKWRDT-EGKTCSYKQKYYKGLGTSSPEEMREYFSKLDKHLKKFHILEEGDAGCIN 59

Query: 670  LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
            LAFSKKK + RK+WL  + PG  LD     I  SDF+NKELIL+SMAD  RSIPS+VDG 
Sbjct: 60   LAFSKKKADDRKEWLRAYRPGTFLDPDLTEIPISDFINKELILYSMADNIRSIPSVVDGF 119

Query: 730  KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
            KP QRKILF  +KRN   E KV+Q  GY++EH+ YHHG+ SL  TI+ +AQDFVGSNN+N
Sbjct: 120  KPSQRKILFGCYKRNLRGEIKVSQLEGYIAEHTGYHHGDASLIQTIISLAQDFVGSNNMN 179

Query: 790  LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
            LL P+G FG+R  GGKDAA+ARYIFT LS ITR +F   D+KLL Y+ +D Q +EP WY+
Sbjct: 180  LLFPHGGFGSRASGGKDAAAARYIFTELSAITRKVFNPLDNKLLTYMQDDEQTVEPEWYV 239

Query: 850  PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
            P++P VLVNG++GIG+GWS+ IP YNP DIV N+ RL+ GE  + M PW++G+ G+I K 
Sbjct: 240  PVVPMVLVNGADGIGSGWSTSIPPYNPDDIVENIHRLMRGEDSQEMTPWFKGWTGSISKI 299

Query: 910  ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSD 969
                    Y V GII +V+ETTL I ELPIR WT   +EFL   +  ++      +   +
Sbjct: 300  XKDR----YRVEGIINQVDETTLEITELPIRMWTITMKEFLLKGLSGSEKQSAWIKDMEE 355

Query: 970  D--TTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKK 1018
            D    + F V LS E M ++ + GL ++F+L +T+STSNM LFD  G IKK
Sbjct: 356  DHGVGIKFIVKLSVEEMAKSLKIGLKERFRLISTVSTSNMVLFDPTGRIKK 406


>gi|12641857|dbj|BAB21547.1| type II DNA topoisomerase, partial [Pyropia haitanensis]
          Length = 383

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/384 (54%), Positives = 269/384 (70%), Gaps = 7/384 (1%)

Query: 120 GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
           G G+PV +H +EGVYVPELIFGHLLTSSNYDD  +K  GGRNGYGAKL NIFST F++ET
Sbjct: 1   GAGIPVAMHAKEGVYVPELIFGHLLTSSNYDDGERKVVGGRNGYGAKLANIFSTRFVVET 60

Query: 180 ADGKRLKKYKQVFTNNMGKKSEPNIS-KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALM 238
           AD      Y  VF  NM  +  P I    K  D WT+++F+PDLAKF M  L+ D VA++
Sbjct: 61  ADAASGHTYTHVFRRNMMDRGAPAIRPSAKPRDAWTRITFEPDLAKFGMGRLDADAVAIL 120

Query: 239 KKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY---PKSVTRFHER-VNERWEICVT 294
           + RVVD+AG +   + V LNG ++ V SF +YVD++        R H+     RWE+ V+
Sbjct: 121 QMRVVDMAGVV-PGIGVYLNGVKLKVHSFKQYVDLHLADAPDAPRIHDAPAGGRWEVVVS 179

Query: 295 LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVF 354
           LS+GQ  Q SFVN IAT KGGTHV +VA+Q+   +   + KK+K   VK   +K+ L +F
Sbjct: 180 LSDGQLTQTSFVNSIATTKGGTHVGHVADQLVGRIQEHIAKKHKALKVKPFQIKSQLSIF 239

Query: 355 VNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKD 414
           +  L++NPAFDS TKE LT R SSFGSK    +   K++  KSG+VE++LS A  +Q K+
Sbjct: 240 LKCLVENPAFDSHTKEMLTSRPSSFGSKWTCPDRVAKELL-KSGVVESVLSLAASRQVKE 298

Query: 415 LKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGV 474
           L K DG K   V GI KL+DANLAG R+S +CTLILTEGDSAKALA++GLSV+GRD +GV
Sbjct: 299 LAKTDGGKRARVSGIPKLDDANLAGTRDSARCTLILTEGDSAKALAISGLSVLGRDLYGV 358

Query: 475 FPLRGKLLNVREASSNQVLNNSEI 498
           FPLRGKLLNVREA+  Q+++N+EI
Sbjct: 359 FPLRGKLLNVREATHKQIMDNAEI 382


>gi|288567|emb|CAA78815.1| DNA topoisomerase II [Homo sapiens]
          Length = 400

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/360 (58%), Positives = 263/360 (73%), Gaps = 14/360 (3%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   M  R +++VPGLYKIFDE
Sbjct: 45  SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 103

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRD  M  +KV ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 104 ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 163

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SE  I 
Sbjct: 164 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 222

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
           K  +G+++T ++F+PDL+KF M  L+ D+VALM +R  DLAG C G  VKV  NG ++PV
Sbjct: 223 KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCRG--VKVMFNGKKLPV 280

Query: 265 KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
             F  YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG 
Sbjct: 281 NGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGR 340

Query: 317 HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
           HVDYV +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+
Sbjct: 341 HVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQ 400


>gi|11559431|dbj|BAB18782.1| type II DNA topoisomerase, partial [Pyropia suborbiculata]
          Length = 382

 Score =  415 bits (1067), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/383 (54%), Positives = 268/383 (69%), Gaps = 6/383 (1%)

Query: 120 GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
           G G+P  +H +EGVYVPELIFGHLLTSSN DD  KK  GGRNGYGAKL NIFST F++ET
Sbjct: 1   GAGIPTAMHAKEGVYVPELIFGHLLTSSNCDDGEKKVVGGRNGYGAKLANIFSTRFVVET 60

Query: 180 ADGKRLKKYKQVFTNNMGKKSEPNI-SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALM 238
           AD    K YKQ F  NM  +  P I +  K  D WT+++F+PDLAKF M  L+ D  A++
Sbjct: 61  ADASSGKTYKQTFKRNMMDRGVPVIRASAKARDAWTRITFEPDLAKFGMERLDADATAVL 120

Query: 239 KKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY---PKSVTRFHERVNERWEICVTL 295
           + RVVD+AG +   + V LNG ++ + SF +YVD++        R H+   +RWE+ V++
Sbjct: 121 QMRVVDMAGVV-PGIAVHLNGVKLKINSFKQYVDLHLADAPDAPRIHDGSADRWEVVVSV 179

Query: 296 SEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFV 355
           S+GQ  Q SFVN IAT KGGTHV++VA+Q+   +   + KK K   VK   +K+ L ++V
Sbjct: 180 SDGQLTQTSFVNSIATTKGGTHVNHVADQLVGRIQEHIAKKRKTLKVKPFQIKSQLSIYV 239

Query: 356 NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
             L++NPAFDSQTKE LT R ++FGSK    +   K +  KSG+VE +LS A  +Q K+L
Sbjct: 240 KCLVENPAFDSQTKEMLTSRPATFGSKWVCPDRMAKDLI-KSGVVENVLSLAESQQVKEL 298

Query: 416 KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVF 475
            K DG K   V GI KL+DANLAG R+S +CTLILTEGDSAKALA++GLSV+GRD +GVF
Sbjct: 299 AKTDGGKRARVTGIPKLDDANLAGTRDSAKCTLILTEGDSAKALAISGLSVLGRDFYGVF 358

Query: 476 PLRGKLLNVREASSNQVLNNSEI 498
           PLRGKLLNVREA+  Q++ N+EI
Sbjct: 359 PLRGKLLNVREATHKQIMENAEI 381


>gi|402582849|gb|EJW76794.1| hypothetical protein WUBG_12295, partial [Wuchereria bancrofti]
          Length = 379

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/414 (50%), Positives = 278/414 (67%), Gaps = 48/414 (11%)

Query: 196 MGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKV 255
           M K  +P +SK   G+++T+++FKPDLAKF MT L+DD+++L+ +R  D+AG   K VKV
Sbjct: 1   MTKDKDPFVSKS-SGEDFTRITFKPDLAKFRMTELDDDIISLISRRAYDVAGST-KGVKV 58

Query: 256 ELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVN 307
            LNG  +PV+ F +YVD Y K             +E+ NERWE+ +T+SE  FQQVSFVN
Sbjct: 59  YLNGKLLPVQGFKQYVDQYAKHNLDNDGEPYKVAYEQANERWEVALTVSEKGFQQVSFVN 118

Query: 308 GIATIKGGTHVDYVANQVANHVMAVVNKK--NKNANVKAHNVKNHLWVFVNALIDNPAFD 365
            IAT KGG HVDYVA+Q+   ++  + KK      NVK   +K+H+W+FVN+L++NP FD
Sbjct: 119 SIATTKGGRHVDYVADQITAKLIDTIKKKVGKSGVNVKPFQIKSHMWIFVNSLVENPTFD 178

Query: 366 SQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED 425
           SQTKET+TL+  SFGSKCELSE F+  V  K GIVE +L+W  FKQ + L K   +K   
Sbjct: 179 SQTKETMTLQAKSFGSKCELSERFINAVM-KCGIVEAVLAWVRFKQQETLDKKCSSKKP- 236

Query: 426 VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
             GI KLEDAN AG +NS  CTLILTEGDSAK+LA++GL VVGRDR+GVFPLRGK+LNVR
Sbjct: 237 --GIPKLEDANDAGTKNSSLCTLILTEGDSAKSLAVSGLGVVGRDRYGVFPLRGKMLNVR 294

Query: 486 EASSNQVLNNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
           E S  Q++ N+EI  + KI+GL+  ++Y+   ++K+LRYG +M+M D             
Sbjct: 295 EGSHKQIMENAEINALIKIIGLQYRLKYDKDEDMKTLRYGKIMVMAD------------- 341

Query: 543 ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK 596
                          QD DGSHIKGL+INFIH  WP L++  +F+ EFITPIVK
Sbjct: 342 ---------------QDQDGSHIKGLVINFIHYNWPVLIR-RNFVEEFITPIVK 379


>gi|37928124|pdb|1QZR|A Chain A, Crystal Structure Of The Atpase Region Of Saccharomyces
           Cerevisiae Topoisomerase Ii Bound To Icrf-187
           (Dexrazoxane)
 gi|37928125|pdb|1QZR|B Chain B, Crystal Structure Of The Atpase Region Of Saccharomyces
           Cerevisiae Topoisomerase Ii Bound To Icrf-187
           (Dexrazoxane)
          Length = 418

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 199/405 (49%), Positives = 273/405 (67%), Gaps = 22/405 (5%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
           YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+  MI + ++ VPGL+KIFDEILVNA
Sbjct: 17  YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 76

Query: 91  ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
           ADNK RDP M  + V I  E   I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNYD
Sbjct: 77  ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 136

Query: 151 DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
           D+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NNM     P I+  K+G
Sbjct: 137 DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKKG 196

Query: 211 DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            ++TKV+FKPDL +F M  L++D++ +M++RV D+ G + + + V LNG  + +++F  Y
Sbjct: 197 PSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 255

Query: 271 VDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
           V++Y KS+                   T  +ER+N RWE+   +S+  FQQ+SFVN IAT
Sbjct: 256 VELYLKSLEKKRQLDNGEDGAAKSDIPTILYERINNRWEVAFAVSDISFQQISFVNSIAT 315

Query: 312 IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
             GGTHV+Y+ +Q+    ++ + KK K  +VK+  +KN++++F+N LI+NPAF SQTKE 
Sbjct: 316 TMGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQ 374

Query: 372 LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLK 416
           LT R   FGS+CE+  E++ K+  K+ +   +   A+  +   LK
Sbjct: 375 LTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALK 418


>gi|322510996|gb|ADX06309.1| DNA gyrase B domain-containing protein [Organic Lake phycodnavirus
           2]
          Length = 483

 Score =  391 bits (1005), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/487 (43%), Positives = 313/487 (64%), Gaps = 16/487 (3%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           T+   YQKK+  EHIL  PDTYIGSIE     +++YE+    ++++ I Y PGL+K+FDE
Sbjct: 3   TLANQYQKKTDKEHILDNPDTYIGSIENVNGPMYVYEDGH--IVNKNIDYNPGLFKLFDE 60

Query: 86  ILVNAADN-------KQRDPKMDAVKVV-IDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
            +VN  D+       K+ D     V ++ I  + ++I++ N+G+G+ +E H    +++PE
Sbjct: 61  GIVNCRDHVVRMLQKKEHDDTTQLVNMIDIQIQDNMITLMNNGNGIDIEKHPTYDIWIPE 120

Query: 138 LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
           LIFGHL TS+NY+ + +K TGG+NG+G KL  I+ST  +IET D  R  KY Q F  N+ 
Sbjct: 121 LIFGHLRTSTNYNKDEEKITGGKNGFGFKLVLIWSTYGMIETIDYTRKLKYTQEFETNLD 180

Query: 198 KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL 257
              +P+I+KC +   +T V FKPD  +  +  L  D++AL ++RV D+AG   K VKV+L
Sbjct: 181 VVHKPSITKCSKKP-YTLVKFKPDYKRLGLNELSKDMIALFQRRVYDIAGITTKDVKVKL 239

Query: 258 NGHRVPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
           NG  + VK+F  YVD+Y     +  E+ +ERW   + LSE +F+QVSFVNGI T KGG H
Sbjct: 240 NGEALDVKNFNHYVDLY-NDCDKISEQ-HERWSYSICLSE-EFKQVSFVNGIFTSKGGKH 296

Query: 318 VDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQS 377
           VDY+  Q+   ++  + KK K  +VK   +K  L +F+N  I NP+FDSQTK+ L    S
Sbjct: 297 VDYIVQQIVKKMIVYIEKKKK-VDVKPSIIKEQLHIFLNCTIVNPSFDSQTKDYLNTPPS 355

Query: 378 SFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANL 437
            FGS C +S++F++K+ AK GI+E     ++ K+  + KK DG K + +RGI KL DAN 
Sbjct: 356 KFGSSCVVSDKFIEKL-AKQGIMENSCELSHIKEKNNSKKTDGNKNKTIRGIPKLVDANY 414

Query: 438 AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
           AG ++S+ CTLIL EGDSAKA  ++GL+   R+  GV+P++GKLLNVR  ++ ++  N E
Sbjct: 415 AGTKDSKLCTLILCEGDSAKAGILSGLTPSDRNIIGVYPMKGKLLNVRGETTKKINENKE 474

Query: 498 IGNIKKI 504
           I  IKK+
Sbjct: 475 IIEIKKL 481


>gi|67590421|ref|XP_665482.1| DNA topoisomerase II [Cryptosporidium hominis TU502]
 gi|54656191|gb|EAL35251.1| DNA topoisomerase II [Cryptosporidium hominis]
          Length = 1069

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 173/282 (61%), Positives = 222/282 (78%), Gaps = 4/282 (1%)

Query: 629 IKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFE 688
            KYYKGLGTST  E KEYF  I  H  +F W DDQD EAI++AFSKK+ E RK W+  ++
Sbjct: 5   FKYYKGLGTSTDLEFKEYFTKIENHSIEFDWMDDQDDEAIDMAFSKKRTEDRKNWIESYK 64

Query: 689 PGNHLD----QKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRN 744
            G ++D     + + ++Y DF++KEL+LFS  D  RSIP+++DGLKPGQRK+LF +FK+ 
Sbjct: 65  EGTYVDYSINNQCRNLRYFDFIHKELVLFSRYDTTRSIPNLLDGLKPGQRKVLFATFKKK 124

Query: 745 FIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGG 804
              E KVAQ +GYV+EHSAYHHGE SL STI+ MAQ+FVGSNN+NLL+P GQFG+R +GG
Sbjct: 125 LNNELKVAQLAGYVAEHSAYHHGESSLQSTIVNMAQNFVGSNNLNLLEPCGQFGSRKEGG 184

Query: 805 KDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIG 864
           KDA++ARYIFT+LS  TR++FP+ DD LL YL +DGQQIEP +Y+PIIP +LVNG++GIG
Sbjct: 185 KDASAARYIFTKLSKWTRYIFPEADDPLLTYLYDDGQQIEPLYYVPIIPMILVNGTDGIG 244

Query: 865 TGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI 906
           TGWSS +PNYNP+DI+ N++R+L GEMM PM PWY+ F G I
Sbjct: 245 TGWSSSVPNYNPKDIIMNLKRMLKGEMMIPMTPWYKSFKGKI 286



 Score =  153 bits (386), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 202/428 (47%), Gaps = 72/428 (16%)

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--------- 954
            G IE+T   E G  Y   G   + NE TL I ELP+RRWTQDY+E+LES +         
Sbjct: 348  GIIEETL--ELGANYETFGNWYKKNEETLVITELPVRRWTQDYKEWLESTLLPAPNADND 405

Query: 955  DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKG 1014
            +  +S+I  +R  S   +V   V +  E + + + EG+ K F+L +T+STSNM LFD   
Sbjct: 406  NIENSWIIDYRDNSSHESVHITVRMRPEKLQQAEMEGIEKIFRLKSTLSTSNMTLFDHNS 465

Query: 1015 VIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNN 1074
             I +Y+T   IL+EF  IRLE YEKRK   L  L  E   LE K+ F+  V+ G I ++N
Sbjct: 466  RIVRYETELDILKEFIPIRLEMYEKRKNYLLSKLNYEKCLLEQKILFLKLVIQGVIGLSN 525

Query: 1075 RKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEES------EENPEVVN-GVQSID 1127
            + +  L+ +L++       +  +  + V  G ++  + S       E+P  V+ G  S+D
Sbjct: 526  KSKETLVSDLKKNNIKSIKQVQELTQWVGVGGSNLAQNSISGSGIGEHPSFVDSGDNSMD 585

Query: 1128 Y--------------------------------------DYLLSMAIGTLTLEKVQGLLA 1149
            Y                                      DYLLSM + +LT EK++ L A
Sbjct: 586  YINFEMNSFDYLESSQKDGILESTSYSRETNKGNELKLFDYLLSMPLWSLTKEKMELLEA 645

Query: 1150 DRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPK 1209
            D  K  EE + L K + E +W  +LD L   ++E +  D   E E   +           
Sbjct: 646  DLIKKTEEYEKLLKTSIEEIWNTELDELLKVIEEEETQDELIEAEHNSLIQKRRLSVDWN 705

Query: 1210 IVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKAPAE-----KLDD- 1263
               K+   N+RK  +K+   +  E++       KV  P+ ++ LKK  A+     ++DD 
Sbjct: 706  DSKKKKTGNSRK--RKNETTKKQESL-------KVKNPQ-KSNLKKTSAKPTKKSRIDDS 755

Query: 1264 DEEDEVPD 1271
            DEED+  D
Sbjct: 756  DEEDDYID 763


>gi|33333782|gb|AAQ11992.1| topoisomerase II [Fusarium tricinctum]
          Length = 415

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 206/449 (45%), Positives = 283/449 (63%), Gaps = 58/449 (12%)

Query: 190 QVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGC 248
           Q +T+NM    +  I+  K  D +T+++FKPD  +F M   ++DD+ +L+ +RV D+ G 
Sbjct: 1   QPWTDNMQTVHKAKITSSKSAD-FTRITFKPDFKRFGMEDGIDDDLESLLYRRVYDMVGT 59

Query: 249 LGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE------------------RWE 290
           + + +KV LN  ++ +K F  Y D+Y KS+ +  ER NE                  RWE
Sbjct: 60  I-RGIKVYLNNEQIKIKDFKAYCDLYAKSIAK--ERSNEEGGAPTCTVEMDKDKGHPRWE 116

Query: 291 ICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNH 350
           +   +S+G FQQVSFVN IAT  GGTHV+YVA+QV  H++ V+NKK K  ++K ++++NH
Sbjct: 117 VGFAVSDGTFQQVSFVNSIATTSGGTHVNYVADQVTKHLLEVLNKKRKGHSLKQNHLRNH 176

Query: 351 LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFK 410
           +++F+N  I+NPAF SQTKE +T + S FGSKC L ++FLKK+ AKS  ++ +L +A  K
Sbjct: 177 IFIFINCYINNPAFTSQTKEQMTTKPSQFGSKCILGDDFLKKI-AKSDALQNILDFAEKK 235

Query: 411 QSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD 470
             K L K DG+K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++  D
Sbjct: 236 ADKMLAKGDGSKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAILDPD 294

Query: 471 RFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQ 530
           R GVFPLRGKLLNVR+AS+ Q+  N+EI NIK++LGLK    Y + K+LRYGHLMIM DQ
Sbjct: 295 RIGVFPLRGKLLNVRDASTEQIAKNAEISNIKQLLGLKHKATYTDTKNLRYGHLMIMADQ 354

Query: 531 VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
                                       DHDGSHIKGLLINF+   +PSLLKIP F  EF
Sbjct: 355 ----------------------------DHDGSHIKGLLINFLEVAYPSLLKIPDFFREF 386

Query: 591 ITPIVKA-----TNKNGKVLSFYSMPDYE 614
           ITPIVK        K  ++ SF++  +YE
Sbjct: 387 ITPIVKVWQGPNPKKPQRLKSFFTQLEYE 415


>gi|10121865|gb|AAG13405.1|AF285159_1 topoisomerase II alpha-4 [Homo sapiens]
          Length = 581

 Score =  381 bits (979), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 190/329 (57%), Positives = 246/329 (74%), Gaps = 12/329 (3%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29  SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88  ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  E  + 
Sbjct: 148 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
           K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+++PVK
Sbjct: 207 KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265

Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            F  YVDMY K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 266 GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325

Query: 318 VDYVANQVANHVMAVVNKKNKNA-NVKAH 345
           VDYVA+Q+   ++ VV KKNK    VKAH
Sbjct: 326 VDYVADQIVTKLVDVVKKKNKGGVAVKAH 354



 Score =  195 bits (496), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 94/146 (64%), Positives = 114/146 (78%), Gaps = 2/146 (1%)

Query: 347 VKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSW 406
           VKNH+W+FVNALI+NP FDSQTKE +TL+  SFGS C+LSE+F+K      GIVE++L+W
Sbjct: 437 VKNHMWIFVNALIENPTFDSQTKENMTLQPKSFGSTCQLSEKFIKAAIG-CGIVESILNW 495

Query: 407 ANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLS 465
             FK    L KK    K   ++GI KL+DAN AGGRNS +CTLILTEGDSAK LA++GL 
Sbjct: 496 VKFKAQVQLNKKCSAVKHNRIKGIPKLDDANDAGGRNSTECTLILTEGDSAKTLAVSGLG 555

Query: 466 VVGRDRFGVFPLRGKLLNVREASSNQ 491
           VVGRD++GVFPLRGK+LNVREAS  Q
Sbjct: 556 VVGRDKYGVFPLRGKILNVREASHKQ 581


>gi|8467995|dbj|BAA96596.1| putative topoisomerase II [Oryza sativa Japonica Group]
 gi|125569648|gb|EAZ11163.1| hypothetical protein OsJ_01012 [Oryza sativa Japonica Group]
          Length = 421

 Score =  381 bits (978), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/382 (52%), Positives = 258/382 (67%), Gaps = 16/382 (4%)

Query: 38  EHILLRPDTYIGSIEKH-TQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           E IL RPD YIGS EK  TQ  WI   +   M+ R ++Y PGL++IFDE+LV+AA NK+R
Sbjct: 29  ERILRRPDGYIGSPEKRSTQTFWI--NDGYYMVPREVTYRPGLHRIFDEVLVHAASNKRR 86

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGV-PVEIHQEE-GVYVPELIFGHLLTSSNYDDNVK 154
           DP MD + V +D     +SV  +G GV PVE+  EE GVY PE+ FGHL      DD  K
Sbjct: 87  DPSMDTLSVEVDVVERSVSVFYNGRGVVPVELVDEERGVYAPEMFFGHLHDDDEEDDQNK 146

Query: 155 KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWT 214
            T  G  GYG KL N+FSTEFIIETADG R+KKYKQVF+ NMGKKS P+I+ C +G+NWT
Sbjct: 147 ATNDGGGGYGVKLANLFSTEFIIETADGCRMKKYKQVFSENMGKKSVPHITDCNQGENWT 206

Query: 215 KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY 274
            ++FKPDLA FNMT+LE+D V LM KRVVD+AG LG SV+VE +G R+ + SF +YV +Y
Sbjct: 207 IITFKPDLAGFNMTYLEEDHVTLMWKRVVDMAGILGDSVQVEWDGVRLRINSFNDYVRLY 266

Query: 275 PKS---------VTRFHERVNERWEICVTLS-EGQFQQVSFVNGIATIKGGTHVDYVANQ 324
             S           R +E++N+  E+C++LS +G FQQVSFVNG  T+KGGTHVDYV   
Sbjct: 267 IDSPVSDRSGAGFPRVYEKLNDWCEVCLSLSDDGHFQQVSFVNGFETLKGGTHVDYVTEL 326

Query: 325 VANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE 384
           +  H+M ++N+  +  N    +VK +LWVF+N +IDNP FDSQTKETLT      GSK E
Sbjct: 327 ITTHLMNLLNEHYEECNFNVDDVKRYLWVFLNVIIDNPTFDSQTKETLTTPPGRLGSKLE 386

Query: 385 LSEEFLKKVTAKSGIVETLLSW 406
           L + F  K+   +G++  L  +
Sbjct: 387 LPKSF-SKIAFGNGLIRRLFGY 407


>gi|349603621|gb|AEP99412.1| DNA topoisomerase 2-beta-like protein, partial [Equus caballus]
          Length = 333

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/334 (57%), Positives = 240/334 (71%), Gaps = 11/334 (3%)

Query: 63  EESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDG 122
           +E   M  R +++VPGLYKIFDEILVNAADNKQRD  M  +KV ID E ++IS+ N+G G
Sbjct: 2   DEDVGMNCREVTFVPGLYKIFDEILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKG 61

Query: 123 VPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADG 182
           +PV  H+ E VYVP LIFG LLTSSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  
Sbjct: 62  IPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACK 121

Query: 183 KRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRV 242
           +    +KQ + NNM K SE  I K  +G+++T ++F+PDL+KF M  L+ D+VALM +R 
Sbjct: 122 EYKHSFKQTWMNNMMKTSEAKI-KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRA 180

Query: 243 VDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPK--------SVTRFHERVNERWEICVT 294
            DLAG   K VKV  NG ++PV  F  YVD+Y K        ++   HE  NERW++C+T
Sbjct: 181 YDLAGSC-KGVKVMFNGKKLPVNGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLT 239

Query: 295 LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWV 353
           LSE  FQQ+SFVN IAT KGG HVDYV +QV + ++ VV KKNK   +VK   VKNH+WV
Sbjct: 240 LSEKGFQQISFVNSIATTKGGRHVDYVVDQVVSKLIEVVKKKNKAGVSVKPFQVKNHIWV 299

Query: 354 FVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE 387
           F+N LI+NP FDSQTKE +TL+  SFGSKC+LSE
Sbjct: 300 FINCLIENPTFDSQTKENMTLQPKSFGSKCQLSE 333


>gi|260807655|ref|XP_002598624.1| hypothetical protein BRAFLDRAFT_67020 [Branchiostoma floridae]
 gi|229283897|gb|EEN54636.1| hypothetical protein BRAFLDRAFT_67020 [Branchiostoma floridae]
          Length = 1181

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/387 (48%), Positives = 264/387 (68%), Gaps = 28/387 (7%)

Query: 671  AFSKKKIEARKKWLL----------------QFEPGNHLDQKEKYIKYSDFVNKELILFS 714
            AF+KKK++ RK+WL                 QF  G    +  KY+ +++FV+KEL+LFS
Sbjct: 112  AFNKKKVDNRKEWLTNWMQDRKQRREMGLGEQFLYG----KDTKYLTFNEFVHKELVLFS 167

Query: 715  MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
             +D +RSIPS+VDGLKPGQRK+LF   KRN  +E KVAQ +G V+E SAYHHGE SL  T
Sbjct: 168  NSDNERSIPSLVDGLKPGQRKVLFTCLKRNDKREVKVAQLAGSVAEMSAYHHGETSLMGT 227

Query: 775  ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
            I+ +AQ+FVGSNN+NLLQP GQFGTR  GGKDAAS RYIFT LS + R LF   D+ +L+
Sbjct: 228  IINLAQNFVGSNNVNLLQPIGQFGTRIHGGKDAASPRYIFTMLSTLARKLFNTFDEPMLN 287

Query: 835  YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
            Y  +D Q+IEP WY+P+IP VLVNG+EGIGTGWS+ +PNY+ R+I+ N+ R+++G+   P
Sbjct: 288  YQYDDNQKIEPEWYIPLIPMVLVNGAEGIGTGWSTKVPNYDVREIINNMLRMIDGKDPLP 347

Query: 895  MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII 954
            M+P Y+ F G IE+         +   G +  ++  T+ I ELPIR WTQ+Y+E +  ++
Sbjct: 348  MNPSYKNFKGDIEELEENR----FVANGEVAILDNNTIEITELPIRTWTQNYKESVLEVM 403

Query: 955  ----DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
                ++  S I  +++Y  DTTV F V ++EE +M+ +  GL K FKL + I+++NM LF
Sbjct: 404  LHGTEKTPSMITDYKEYHTDTTVRFVVSMTEEQLMKAEAAGLHKVFKLQSNIASTNMVLF 463

Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFY 1037
            D  G ++ Y++  QIL+EFF +RL+++
Sbjct: 464  DHNGCLRTYNSVHQILQEFFDLRLQWF 490



 Score =  103 bits (256), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 108/199 (54%), Gaps = 9/199 (4%)

Query: 1009 LFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNG 1068
            LFD  G ++ Y++  QIL+EFF +RLE+Y KRK   +  LE E  KL N+ RFIL  + G
Sbjct: 543  LFDHNGCLRTYNSVHQILQEFFDLRLEWYTKRKDWLMGMLEAEASKLNNQARFILEKIEG 602

Query: 1069 EIVVNNRKRTDLLLELRQKGFTPFP-------KNSKSIEAVVAGATDETEESEENPEVVN 1121
            ++V+ N+ + +L+  L+ +G+   P       +N K     +    +E  ES  +     
Sbjct: 603  KLVIENKPKRELIQMLQARGYDSDPVKAWKETQNDKDKPDDLLDVEEEEAESVASSTASR 662

Query: 1122 GVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQL 1181
            G    DY+YLL M +  L+ EK + LL  + +  +E++DLR  TP  LW  DL+    +L
Sbjct: 663  G--GPDYNYLLGMPLWNLSREKKEELLKQQREKGQELEDLRHKTPSDLWKDDLNDFVEEL 720

Query: 1182 DELDKSDARAEEERMKIKG 1200
            + +++ +   E+   KIK 
Sbjct: 721  ERVEQQEKEDEQNSGKIKA 739



 Score = 45.8 bits (107), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 3/44 (6%)

Query: 492 VLNNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVL 532
           ++ N+EI N+ KI+GL+   +Y    ++KSLRYG +MIMTDQ  
Sbjct: 70  IMENAEINNVIKIMGLQYKRKYESEEDMKSLRYGKIMIMTDQAF 113


>gi|34810356|pdb|1PVG|A Chain A, Crystal Structure Of The Atpase Region Of Saccharomyces
           Cerevisiae Topoisomerase Ii
 gi|34810357|pdb|1PVG|B Chain B, Crystal Structure Of The Atpase Region Of Saccharomyces
           Cerevisiae Topoisomerase Ii
          Length = 418

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/382 (49%), Positives = 257/382 (67%), Gaps = 21/382 (5%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
           YQK SQLEHIL RPDTYIGS+E   Q  WIY+EE+   I + ++ VPGL+KIFDEILVNA
Sbjct: 17  YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCXIEKNVTIVPGLFKIFDEILVNA 76

Query: 91  ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
           ADNK RDP    + V I  E   I V N G G+P+EIH +E +Y+PE IFGHLLTSSNYD
Sbjct: 77  ADNKVRDPSXKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEXIFGHLLTSSNYD 136

Query: 151 DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
           D+ KK TGGRNGYGAKL NIFSTEFI+ETAD    +KY Q + NN      P I+  K+G
Sbjct: 137 DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNXSICHPPKITSYKKG 196

Query: 211 DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
            ++TKV+FKPDL +F    L++D++ + ++RV D+ G + + + V LNG  + +++F  Y
Sbjct: 197 PSYTKVTFKPDLTRFGXKELDNDILGVXRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 255

Query: 271 VDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
           V++Y KS+                   T  +ER+N RWE+   +S+  FQQ+SFVN IAT
Sbjct: 256 VELYLKSLEKKRQLDNGEDGAAKSDIPTILYERINNRWEVAFAVSDISFQQISFVNSIAT 315

Query: 312 IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
             GGTHV+Y+ +Q+    ++ + KK K  +VK+  +KN+ ++F+N LI+NPAF SQTKE 
Sbjct: 316 TXGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNXFIFINCLIENPAFTSQTKEQ 374

Query: 372 LTLRQSSFGSKCELSEEFLKKV 393
           LT R   FGS+CE+  E++ K+
Sbjct: 375 LTTRVKDFGSRCEIPLEYINKI 396


>gi|12641855|dbj|BAB21546.1| type II DNA topoisomerase [Pyropia dentata]
          Length = 359

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 193/360 (53%), Positives = 251/360 (69%), Gaps = 7/360 (1%)

Query: 144 LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
           LTSSNYDD  +K  GGRNGYGAKL NIFST F++ETAD    + Y Q F  NM  +  P 
Sbjct: 1   LTSSNYDDGERKVVGGRNGYGAKLANIFSTRFVVETADAGSGQTYAQTFRRNMMDRGAPA 60

Query: 204 IS-KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
           I    K  D WT+++F+PDLAKF M  L+ D VA+++ RVVD+AG +   + V LNG ++
Sbjct: 61  IRPSAKPRDAWTRITFEPDLAKFGMGRLDADAVAVLQMRVVDMAGVV-PGISVYLNGVKL 119

Query: 263 PVKSFAEYVDMYPKSVT---RFHERV-NERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
            V SF +YVD++   V    R H+     RWE+ V++S+GQ  Q SFVN IAT KGGTHV
Sbjct: 120 KVNSFKQYVDLHLADVPDAPRIHDAPPGSRWEVVVSVSDGQLTQTSFVNSIATTKGGTHV 179

Query: 319 DYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
            +VA+Q+   +   + KK+K   VK   +K+ L ++V  L++NPAFDSQTKE LT R SS
Sbjct: 180 GHVADQLVARIQEHIAKKHKALKVKPFQIKSQLSIYVKCLVENPAFDSQTKEMLTSRPSS 239

Query: 379 FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLA 438
           FGSK    +   K++  KSG+VE +LS A  +Q+K+L K DG K   V GI KL+DANLA
Sbjct: 240 FGSKWTCPDRMAKELL-KSGVVENVLSLAASRQNKELAKTDGGKRARVSGIPKLDDANLA 298

Query: 439 GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
           G R+S +CTLILTEGDSAKALA++GLSV+GRD +GVFPLRGKLLNVREA+  Q+++N+EI
Sbjct: 299 GTRDSARCTLILTEGDSAKALAISGLSVLGRDLYGVFPLRGKLLNVREATHKQIMDNAEI 358


>gi|33333784|gb|AAQ11993.1| topoisomerase II [Gibberella zeae]
          Length = 415

 Score =  375 bits (962), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 203/449 (45%), Positives = 278/449 (61%), Gaps = 58/449 (12%)

Query: 190 QVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGC 248
           Q +T+NM    +  I+  K   ++T+++FKPD  +F M   ++DD+ +LM +RV D+ G 
Sbjct: 1   QPWTDNMNTMHKAKITASKSA-SYTRITFKPDFKRFGMEDGIDDDLESLMYRRVYDMVGT 59

Query: 249 LGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE------------------RWE 290
           + + +KV LNG +V +K F  Y D+Y KS+ +  +R++E                  RWE
Sbjct: 60  I-RGIKVFLNGEQVKIKDFKAYCDLYAKSIAK--DRLDEEGGSPTCTVEMDKDKSHPRWE 116

Query: 291 ICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNH 350
           +   +S+G FQQVSFVN IAT  GGTHV+Y+A+Q+   ++  +NKK K   +K ++++NH
Sbjct: 117 VGFAVSDGTFQQVSFVNSIATTAGGTHVNYIADQITKSLLNTLNKKRKGHTLKQNHLRNH 176

Query: 351 LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFK 410
           ++VF+N  IDNPAF SQTKE +T + S FGSKC L ++FLKKV AKS  ++ +L  A  K
Sbjct: 177 IFVFINCYIDNPAFSSQTKEQMTTKASQFGSKCTLGDDFLKKV-AKSDAIQNILDMAEKK 235

Query: 411 QSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD 470
             K + K+DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++  D
Sbjct: 236 ADKMMAKSDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAILDPD 294

Query: 471 RFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQ 530
           R GV PLRGKLLNVR+AS +Q+  N EI NIK+ LGLK    Y + K+LRYGHLMIM D 
Sbjct: 295 RIGVLPLRGKLLNVRDASPDQIAKNQEIQNIKQFLGLKHKTSYTDTKNLRYGHLMIMAD- 353

Query: 531 VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
                                      QDHDGSHIKGLLINF+   +PSLL+IP F  EF
Sbjct: 354 ---------------------------QDHDGSHIKGLLINFLEVQFPSLLRIPDFFREF 386

Query: 591 ITPIVKA-----TNKNGKVLSFYSMPDYE 614
           ITPIVK        K  K+ SF++  +YE
Sbjct: 387 ITPIVKVWQGPNPKKPQKLKSFFTQLEYE 415


>gi|37778802|gb|AAP31847.1| topoisomerase II [Nectria haematococca mpVI]
          Length = 415

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 212/449 (47%), Positives = 283/449 (63%), Gaps = 58/449 (12%)

Query: 190 QVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-LEDDVVALMKKRVVDLAGC 248
           Q +T+NM K  +  I+  K  D + +++FKPD  +F M   ++DD+  L+ +RV D+AG 
Sbjct: 1   QPWTDNMQKMQKAKITSSKTAD-FVRITFKPDYKRFGMEDGIDDDLERLLYRRVYDMAGT 59

Query: 249 LGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNE------------------RWE 290
           + + VKV LNG  + +K F  Y D+Y KS+ +  ER++E                  RWE
Sbjct: 60  V-RGVKVHLNGEVLKLKDFKGYCDLYAKSIAK--ERMDEEGGTPTCSVEMDKDKGHPRWE 116

Query: 291 ICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNH 350
           +   +S+G FQQVSFVN IAT  GG+HVDY+ANQV  +++  +NKK K   +K  ++KNH
Sbjct: 117 VGFAVSDGTFQQVSFVNSIATTSGGSHVDYIANQVTAYLLKALNKKKKGHTLKQSHLKNH 176

Query: 351 LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFK 410
           +++FVN LIDNPAF+SQTKE +T + S FGSKC+L E+FLKKV AKS  ++ ++ +A  K
Sbjct: 177 IFIFVNCLIDNPAFNSQTKEHMTTKTSQFGSKCQLGEDFLKKV-AKSEAIQNIMDFAERK 235

Query: 411 QSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD 470
             K L K+DG K   V   +KL +ANLAG R   +CTLILTEGDSAK LA++G +++  D
Sbjct: 236 ADKMLAKSDGNKRSRVSN-AKLVEANLAGTRRGHECTLILTEGDSAKGLAVSGRAILDPD 294

Query: 471 RFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQ 530
           R GVFPLRGKLLNVR+AS +Q+  N EI NIK+ LGLK    Y + KSLRYGHLMIM DQ
Sbjct: 295 RIGVFPLRGKLLNVRDASVDQITKNQEIQNIKQFLGLKHKQVYTDTKSLRYGHLMIMADQ 354

Query: 531 VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
                                       DHDGSHIKGLLINF+   +PSLLK+P F  EF
Sbjct: 355 ----------------------------DHDGSHIKGLLINFLQVQFPSLLKVPDFFREF 386

Query: 591 ITPIVKA-----TNKNGKVLSFYSMPDYE 614
           ITPIVK        K  ++ SF++  +YE
Sbjct: 387 ITPIVKVWQGPNPKKPLRLKSFFTQLEYE 415


>gi|321472296|gb|EFX83266.1| hypothetical protein DAPPUDRAFT_315718 [Daphnia pulex]
          Length = 711

 Score =  367 bits (942), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 215/597 (36%), Positives = 343/597 (57%), Gaps = 34/597 (5%)

Query: 603  KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDD 662
            + + FYS+ +YE WK S   N   + IK+Y+GLG+ TS+E +  F N+  H+  F    D
Sbjct: 129  ECVRFYSLLEYEEWK-SDTENWQHYRIKHYQGLGSMTSEEMESVFTNLPSHRVIFKHNGD 187

Query: 663  QDGEAIELAFSKKKIEARKKWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKEL 710
             D  AI +AFSK+     + WL  +            P  HL ++E +++ + +FV++ L
Sbjct: 188  DDDRAISMAFSKRHSGQHRDWLDFWNKASKWLRESPYPKLHLYRRETRHVSFYEFVHRGL 247

Query: 711  ILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAY-HHGEQ 769
            + ++  + +R   S++DGL  GQRKI+F   KR   +E  VAQ +G V+  ++  ++ E+
Sbjct: 248  VHYTNMEHERYTRSIMDGLTVGQRKIIFTCIKRTDKEEVTVAQLAGLVAARTSLCNYDEE 307

Query: 770  SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
            +L  TI+G+A DFVG+NNINLLQP G FGTR QGG+DAAS R I T +S +TR +F   D
Sbjct: 308  NLTRTIIGLAHDFVGTNNINLLQPIGHFGTRLQGGEDAASPRQISTLMSQLTRIIFHPHD 367

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
            D LL +  +  + IEP +Y PIIP +LVNG  GIGT W++    YNPRDI+ N+ R+LNG
Sbjct: 368  DWLLKHRTDGKRLIEPEFYAPIIPMILVNGIGGIGTDWTTSRLIYNPRDIIENIMRMLNG 427

Query: 890  EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE- 948
            E    M+PW +G+ G+I++        TY ++G + +++ T + I ELP+    ++YRE 
Sbjct: 428  EEPIYMNPWIKGYQGSIQRVDDN----TYVISGEVSKLSATQVVITELPLGISVRNYRES 483

Query: 949  FLESIIDQNDS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTS 1005
             +E+++  ++     I G+++Y  DTTV F V ++EE M + + +G    F+L  T + +
Sbjct: 484  VMENLLHGSEKIPPLITGYKEYHTDTTVRFVVNMTEEKMQQAESQGFHDLFRLQCTHTVT 543

Query: 1006 NMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGV 1065
               L+D  G +K YD+   IL+ +F +RL  +E+RKK+    L+    KL N++R++  +
Sbjct: 544  PTLLYDPNGFLKNYDSNNDILKTYFDVRLNLFEERKKLLTGELQASCKKLTNEIRYVHAI 603

Query: 1066 VNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS 1125
             NG+++VN +K   L+ ELR+  F P P     + A +    D  +  +E       V  
Sbjct: 604  WNGDLIVNRKKINVLVEELRRLNFDPDP-----LRARMKNQNDNVKTEDE-------VGD 651

Query: 1126 IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
             D+ YLL M   +LTLE +  LL ++    + ++   K +   LW   L  L  ++D
Sbjct: 652  DDFSYLLMMNTRSLTLEGLNELLQNQKFKMKALEIALKKSARDLWRDSLTFLLKKMD 708



 Score = 72.8 bits (177), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/85 (50%), Positives = 59/85 (69%), Gaps = 4/85 (4%)

Query: 409 FKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVG 468
           F Q +D ++N  TK +D   I  LEDA  AG   S +CTLILT+GDSAK+ A+ GL VVG
Sbjct: 51  FSQIQDGEQNP-TKLKD---IPHLEDAINAGTAESIKCTLILTKGDSAKSQAVTGLGVVG 106

Query: 469 RDRFGVFPLRGKLLNVREASSNQVL 493
           R ++GV+ L+ +LLNV+EAS  + +
Sbjct: 107 RAKYGVYVLQEELLNVQEASRKECV 131


>gi|158254107|gb|AAI54369.1| Top2a protein [Danio rerio]
          Length = 349

 Score =  365 bits (937), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 181/315 (57%), Positives = 233/315 (73%), Gaps = 11/315 (3%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++E++  M  R I++VPGLYKIFDE
Sbjct: 28  SVERIYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDEDTG-MNCRDITFVPGLYKIFDE 86

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRD  M+ +KV ID E++ ISV N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 87  ILVNAADNKQRDKTMNCIKVTIDPENNTISVWNNGKGIPVVEHKVEKVYVPALIFGQLLT 146

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFS +F +ETA  +  + +KQ + +NMG+  E  I 
Sbjct: 147 SSNYDDDEKKVTGGRNGYGAKLCNIFSLKFTVETACRESKRCFKQTWFDNMGRAGESKI- 205

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
           K  +GD++T ++F+PDLAKF M  L+ D VAL+ +R  D+AG   K V+V LNG R+P+ 
Sbjct: 206 KPFDGDDYTCITFQPDLAKFKMQALDKDTVALLTRRAYDIAGST-KGVRVLLNGKRLPIN 264

Query: 266 SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
           +F  YVD+Y K         +T  HE VNERWE+C+TLSE  FQQVSFVN IAT KGG H
Sbjct: 265 NFRTYVDLYVKDKVDETGSPLTVVHEMVNERWEVCLTLSEKGFQQVSFVNSIATTKGGRH 324

Query: 318 VDYVANQVANHVMAV 332
            DYVA+Q+ + ++ V
Sbjct: 325 TDYVADQIVSKLIEV 339


>gi|34786040|gb|AAH57873.1| Top2a protein [Mus musculus]
          Length = 345

 Score =  364 bits (935), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 178/308 (57%), Positives = 233/308 (75%), Gaps = 11/308 (3%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 28  SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 86

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRDPKM  ++V ID E+++IS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 87  ILVNAADNKQRDPKMSCIRVTIDPENNVISIWNNGKGIPVVEHKVEKIYVPALIFGQLLT 146

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + +NMG+  +  + 
Sbjct: 147 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGDMEL- 205

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
           K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG+ +PVK
Sbjct: 206 KPFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNSLPVK 264

Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            F  YVD+Y K        S+   HE+VN RWE+C+T+SE  FQQ+SFVN IAT KGG H
Sbjct: 265 GFRSYVDLYLKDKVDETGNSLKVIHEQVNPRWEVCLTMSERGFQQISFVNSIATSKGGRH 324

Query: 318 VDYVANQV 325
           VDYVA+Q+
Sbjct: 325 VDYVADQI 332


>gi|134026046|gb|AAI35319.1| LOC100038293 protein [Xenopus (Silurana) tropicalis]
          Length = 343

 Score =  362 bits (928), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 183/346 (52%), Positives = 241/346 (69%), Gaps = 11/346 (3%)

Query: 1   MTVDKRLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWI 60
           M  D   PL       V        ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+
Sbjct: 1   METDPLQPLENKTVGKVKKSDNKRLSVERIYQKKTQLEHILLRPDTYIGSVEPVTQQMWV 60

Query: 61  YEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSG 120
           ++E+ + +  R +++VPGLYKIFDEILVNAADNKQRDP M  +K+ I+ E + +SV N+G
Sbjct: 61  FDED-EGLNCRDVTFVPGLYKIFDEILVNAADNKQRDPTMSCIKITINPESNTVSVWNNG 119

Query: 121 DGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETA 180
            G+PV  H+ E V+VP LIFG LLTSSNYDD+ KK TGGRNGYGAKL NIFS +F +ETA
Sbjct: 120 KGIPVVEHKVEKVFVPALIFGQLLTSSNYDDDQKKVTGGRNGYGAKLCNIFSNKFTVETA 179

Query: 181 DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKK 240
             +  K +KQ +T+NM   ++  I K  +G+++T ++F+PDL+KF M  L+ D+VALM +
Sbjct: 180 CREYKKVFKQTWTDNMSDAADAKI-KPFDGEDYTCITFQPDLSKFKMQILDKDIVALMSR 238

Query: 241 RVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEIC 292
           R  D+AG   K VKV LNG R+P+  F  YVD+Y K+        +   HE VN+RWEIC
Sbjct: 239 RAYDVAGS-SKGVKVFLNGKRLPISGFRSYVDLYLKNKLDETGNPLKVMHELVNDRWEIC 297

Query: 293 VTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK 338
           +T+SE  FQQ+SFVN IAT KGG HVDYVA+Q+   ++ VV KK K
Sbjct: 298 LTMSEKGFQQISFVNSIATTKGGRHVDYVADQIIAKLIEVVKKKKK 343


>gi|328909433|gb|AEB61384.1| DNA topoisomerase 2-beta-like protein, partial [Equus caballus]
          Length = 334

 Score =  359 bits (921), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 176/318 (55%), Positives = 229/318 (72%), Gaps = 8/318 (2%)

Query: 698  KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
            K++ Y+DF+NKELILFS +D +RSIPS+VDG KPGQRK+LF  FKRN  +E KVAQ +G 
Sbjct: 19   KHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGS 78

Query: 758  VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
            V+E SAYHHGEQ+L  TI+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS RYIFT L
Sbjct: 79   VAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTML 138

Query: 818  SPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPR 877
            S + R LFP  DD LL +L +D Q++EP WY+PIIP  L+NG+EGIGTGW+  +PNY+ R
Sbjct: 139  SSLARLLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMFLINGAEGIGTGWACKLPNYDAR 198

Query: 878  DIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKEL 937
            +IV NVRR+L G    PM P Y+ F GTI++    +    Y V+G I  V+  T+ I EL
Sbjct: 199  EIVNNVRRMLEGLDPHPMLPNYKNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITEL 254

Query: 938  PIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLL 993
            P+R WTQ Y+E  LE ++   D+  + I  +++Y  DTTV F V ++EE + + +  GL 
Sbjct: 255  PVRTWTQVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLH 314

Query: 994  KKFKLTTTISTSNMHLFD 1011
            K FKL TT++ ++M LFD
Sbjct: 315  KVFKLQTTLTCNSMVLFD 332


>gi|125525059|gb|EAY73173.1| hypothetical protein OsI_01045 [Oryza sativa Indica Group]
          Length = 408

 Score =  357 bits (917), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 193/381 (50%), Positives = 249/381 (65%), Gaps = 27/381 (7%)

Query: 38  EHILLRPDTYIGSIEKH-TQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           E IL RPD YIGS EK  TQ  WI   +   M+ R ++Y PGL++IFDE+LV+AA NK+R
Sbjct: 29  ERILRRPDGYIGSPEKRSTQTFWI--NDGYYMVPREVTYRPGLHRIFDEVLVHAASNKRR 86

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGV-PVEIHQEE-GVYVPELIFGHLLTSSNYDDNVK 154
           DP MD + V +D     +SV  +G GV PVE+  EE GVY PE+ FGHL      DD  K
Sbjct: 87  DPSMDTLSVEVDVVERSVSVFYNGRGVVPVELVDEERGVYAPEMFFGHLHDDDEEDDQNK 146

Query: 155 KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWT 214
            T  G  GYG KL N+FSTEFIIETADG R+KKYKQVF+ NMGKKS P+I+ C +G+NWT
Sbjct: 147 ATNDGGGGYGVKLANLFSTEFIIETADGCRMKKYKQVFSENMGKKSVPHITDCNQGENWT 206

Query: 215 KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY 274
            ++FKPDLA+FNMT+LE+D V LM KRVVD+AG LG SV+VE +G R+ + SF +YV +Y
Sbjct: 207 IITFKPDLARFNMTYLEEDHVTLMWKRVVDMAGILGDSVQVEWDGVRLRINSFNDYVRLY 266

Query: 275 PKS---------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQV 325
             S           R +E++N+ W  C         +V FVNG  T+KGGTHVDYV   +
Sbjct: 267 IDSPVSDRSGAGFPRVYEKLND-W--C---------EVRFVNGFETLKGGTHVDYVTELI 314

Query: 326 ANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCEL 385
             H+M ++N+  +  N    +VK +LWVF+N +IDNP FDSQTKETLT      GSK EL
Sbjct: 315 TTHLMNLLNEHYEECNFNVDDVKRYLWVFLNVIIDNPTFDSQTKETLTTPPGRLGSKLEL 374

Query: 386 SEEFLKKVTAKSGIVETLLSW 406
            + F  K+   +G++  L  +
Sbjct: 375 PKSF-SKIAFGNGLIRRLFGY 394


>gi|321473423|gb|EFX84390.1| hypothetical protein DAPPUDRAFT_30330 [Daphnia pulex]
          Length = 547

 Score =  353 bits (907), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 214/568 (37%), Positives = 325/568 (57%), Gaps = 38/568 (6%)

Query: 627  WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARK----- 681
            + IK+YKGL T   +E KE F N+  H+ DF    D D  AI +AF+ K +E  +     
Sbjct: 1    YHIKHYKGLETLRKEEVKECFSNLQRHQIDFRHGGDDDDRAISMAFNNKHLEEWRYRLNV 60

Query: 682  -----KWLLQFEPGNHLDQKE-KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRK 735
                 K L Q      L  K+ K + Y DFV K+LI F   +  RS+PS++DG    QRK
Sbjct: 61   WKNACKDLRQLGFSGDLYAKDIKEVSYHDFVKKDLIRFRNMEYVRSVPSIMDGFNERQRK 120

Query: 736  ILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNG 795
             L+   KR++ +E  VAQ +  V+E+ AY+  +  L  TI G+AQDFVGSNNINLL PNG
Sbjct: 121  TLYTCIKRDYKEEINVAQLAVSVAENCAYYQPDL-LIGTITGLAQDFVGSNNINLLIPNG 179

Query: 796  QFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTV 855
            QF +R+   KD  S  YIFT +S ITR +F   DD LL Y  +  Q IEP ++ PIIP V
Sbjct: 180  QFASRHLESKDVGSPDYIFTMMSKITRKIFHPRDDPLLKYRTDGNQSIEPEYFAPIIPMV 239

Query: 856  LVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAG 915
            LVNG+ GIGTG+ + IP  NPR+I+ N++R+LNGE   PM PW++G+ GT+E+       
Sbjct: 240  LVNGANGIGTGFKTKIPKQNPREIIENLKRMLNGEKPNPMDPWFKGYRGTVERIDQ---- 295

Query: 916  VTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDT 971
            + + ++G +  ++ TT+ I ELP+   T++Y++  LE ++   ++    I  ++++  D 
Sbjct: 296  LNFVISGELAVLSPTTIEITELPVDVPTENYKKSVLEKLLCGSEECPPIITDYQEHHTDN 355

Query: 972  TVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFH 1031
             V F V ++E+ M + + EG  + FKL +  S  +M L+DS G +K Y++ + I+ EF+ 
Sbjct: 356  NVRFVVTMTEKMMQQVESEGFHRAFKLQSVYSLRSMLLYDSNGSLKTYNSVDDIMNEFYE 415

Query: 1032 IRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLL-ELRQKGFT 1090
            +RLE Y KR+      +E    +L N+  F+  + +  ++V++ K+ D+LL ELR++ + 
Sbjct: 416  VRLELYRKRRDYFSGKVEALRARLVNQNNFLTEISSKVLIVDSEKKFDVLLEELRRRNYA 475

Query: 1091 PFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID-YDYLLSMAIGTLTLEKVQGLLA 1149
            P P        ++A       E + N +V  GV ++  Y YL  + I   T E  Q  LA
Sbjct: 476  PDP--------LIAW------EKKSNCDV--GVANVGCYQYLHQLPIRFQTNEGKQAYLA 519

Query: 1150 DRDKLNEEVDDLRKATPESLWVKDLDAL 1177
             + K   E + L   +PE LW +DL+ L
Sbjct: 520  KKIKEIRECELLSDPSPEDLWRRDLEEL 547


>gi|343957945|emb|CBY93681.1| putative top2 protein [Glomus diaphanum]
          Length = 359

 Score =  351 bits (901), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 175/349 (50%), Positives = 240/349 (68%), Gaps = 32/349 (9%)

Query: 10  TTSNNANVVGPT-APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTM 68
           ++S ++ V  P+ A  KTIEE+YQKK+QLEH+LLRPDTY+GS+E   + +W+Y+ E + M
Sbjct: 27  SSSKSSEVATPSKAIEKTIEEVYQKKTQLEHVLLRPDTYVGSVEPLKEKMWVYDSEKQGM 86

Query: 69  IHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIH 128
           ++R I+YVPGLYKI DEILVNAADNK RDP M+ +KV I++E   IS++N+G G+P+EIH
Sbjct: 87  VYRDITYVPGLYKIVDEILVNAADNKVRDPTMNTIKVNINKEEGTISIYNNGKGIPIEIH 146

Query: 129 QEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKY 188
           +EE        FG            KK TGGRNGYGAKL NIFSTEFI+ET D    KKY
Sbjct: 147 KEEK-------FGE-----------KKVTGGRNGYGAKLANIFSTEFIVETTDSSVSKKY 188

Query: 189 KQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGC 248
           +Q+F NNM    EP ++   + + +T ++FKPD  KFNM+  +DD+ AL+KKRV D+  C
Sbjct: 189 RQIFRNNMSVIEEPKLTSYSKKEEYTMITFKPDFEKFNMSQFDDDITALLKKRVYDMVAC 248

Query: 249 LGKSVKVELNGHRVPVKSFAEYVDMY--------PKSVTRFHERVNERWEICVT-LSEGQ 299
           +  ++KV LN  ++ +K F EY+ +Y        P+ V   +ERVN RWEI V   SE Q
Sbjct: 249 VN-NIKVYLNNEKLKLKDFKEYMQLYLGEREEPRPEIV---YERVNNRWEIGVLPSSESQ 304

Query: 300 FQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVK 348
           F Q+SFVN I T KGGTHV+Y+A+Q+A+ +++ V  K K+AN+K + VK
Sbjct: 305 FLQISFVNSICTSKGGTHVNYIADQLADRILSAVKSKKKDANIKKNQVK 353


>gi|402586744|gb|EJW80681.1| DNA topoisomerase 2, partial [Wuchereria bancrofti]
          Length = 750

 Score =  345 bits (886), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 210/467 (44%), Positives = 279/467 (59%), Gaps = 44/467 (9%)

Query: 736  ILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNG 795
            +LF  FKR   KE KVAQ +G V E SAYHHGE SL STI+ +AQD+VGSNNINLL P G
Sbjct: 1    VLFTCFKRADKKEVKVAQLAGAVGEMSAYHHGEASLMSTIVNLAQDYVGSNNINLLLPIG 60

Query: 796  QFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTV 855
            QFGTR QGGKD+AS RYIFT+L+P+TR LFP  D+ +L +L E+ Q+IEP WY PIIPTV
Sbjct: 61   QFGTRLQGGKDSASPRYIFTQLNPVTRALFPAVDENVLRFLFEENQRIEPEWYCPIIPTV 120

Query: 856  LVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAG 915
            LVNG+EGIGT WS+ IPNYNPR+IV N+RRL+ GE  +P+ PW++ F GTIEK       
Sbjct: 121  LVNGAEGIGTAWSTKIPNYNPREIVDNMRRLIRGEEPKPLIPWFKNFRGTIEKLDESR-- 178

Query: 916  VTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESIIDQNDS---FIRGFRQYSDDT 971
              Y  +G I  +++ T+ I ELPIR WTQ Y+E  LES+++ +D     I+ F++Y  DT
Sbjct: 179  --YICSGEIALLSDDTIEITELPIRTWTQTYKESVLESMLEGSDKQPPLIQDFKEYHTDT 236

Query: 972  TVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFH 1031
            TV F V ++   +   + EGL K FKL T I+ S+M LFD  G ++++   E+I +EFF 
Sbjct: 237  TVKFLVKMNPAKLREAEMEGLHKIFKLQTAINISSMVLFDPLGCLRRFSNVEEICKEFFE 296

Query: 1032 IRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLL--LELRQKGF 1089
            +R      +K    E       K   +  F+L   NG  + ++ K  +L    EL   G 
Sbjct: 297  VR------KKSTSNE-------KHSKRACFVLK-ANGSAIRSSEKWKELQRKRELEMTG- 341

Query: 1090 TPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS------IDYDYLLSMAIGTLTLEK 1143
                      E  V     E EE EE+   V+ ++        DYDYL+ MAI  L+ E+
Sbjct: 342  ----------EVQVDDEGMEGEEEEESESSVSPMKKDLEKKLSDYDYLVGMAILKLSEEE 391

Query: 1144 VQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
               LL D +   EE+  L   T   LW +DL      L EL+K +A+
Sbjct: 392  KDKLLHDSELKLEELKALELKTWSDLWEEDLSNF---LVELEKQEAK 435


>gi|328697364|ref|XP_003240317.1| PREDICTED: DNA topoisomerase 2-like [Acyrthosiphon pisum]
          Length = 333

 Score =  343 bits (879), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 167/332 (50%), Positives = 229/332 (68%), Gaps = 8/332 (2%)

Query: 733  QRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQ 792
            Q  +LF   KRN  +E KVAQ +G V+EHSAYHHGE SL STI+ +AQ++VGSNNINLLQ
Sbjct: 6    QLHVLFTCIKRNDKREIKVAQLAGSVAEHSAYHHGEVSLMSTIVNLAQNYVGSNNINLLQ 65

Query: 793  PNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPII 852
            P GQFGTR QGGKDAAS RYIFT LSP+TR +F   DD LL YL +D Q+IEP WYMPII
Sbjct: 66   PIGQFGTRLQGGKDAASPRYIFTMLSPLTRLIFHPHDDPLLTYLRDDNQKIEPVWYMPII 125

Query: 853  PTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASK 912
            P VLVNG+EGIGTGW + IPN+NPR++++N++R+L GE   PM PWY+ F G IEK + +
Sbjct: 126  PMVLVNGAEGIGTGWMTKIPNHNPREVISNIKRMLRGEDPLPMKPWYKNFTGHIEKLSEQ 185

Query: 913  EAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYS 968
            +    +  +G +  +    + I ELP+  WTQ+Y+E  LE ++   +++ + I  +++Y+
Sbjct: 186  K----FISSGELGVIGHNRVEITELPVGVWTQNYKESVLEPMLTDTEKSPAVITDYKEYN 241

Query: 969  DDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEE 1028
             DTT+ F + ++ E + + + EG+ K FKL  +I  ++M  FD   V+KKY+  +QIL E
Sbjct: 242  TDTTIKFVITMNPEKLQKAENEGIHKFFKLHASIGLTSMCAFDKDCVLKKYEATQQILRE 301

Query: 1029 FFHIRLEFYEKRKKVQLENLELELLKLENKVR 1060
            F+ +RL+FY KRK      L  E  KL N+ R
Sbjct: 302  FYAVRLDFYGKRKAYLEGMLGAEAAKLTNQAR 333


>gi|402589485|gb|EJW83417.1| hypothetical protein WUBG_05670 [Wuchereria bancrofti]
          Length = 374

 Score =  340 bits (871), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 168/297 (56%), Positives = 220/297 (74%), Gaps = 11/297 (3%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQA-LWIYEEESKTMIHRTISYVPGLYKIFD 84
           +IE++YQKKSQLEHILLRPDTYIGS+E   +  +W+Y+ E+  ++ R ISYVPGLYKIFD
Sbjct: 75  SIEKIYQKKSQLEHILLRPDTYIGSVEYTDRTPMWVYDTETDRIVQREISYVPGLYKIFD 134

Query: 85  EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
           EILVNAADNKQRDPKM+ +KV I++E + IS++N+G G+PV +H+ E +YVPELIFG LL
Sbjct: 135 EILVNAADNKQRDPKMNLIKVNINKEKNEISIYNNGRGIPVVLHKIEKLYVPELIFGTLL 194

Query: 145 TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
           TSSNYDD+ +K TGGRNGYGAKL NIFS EF +ET+  +  K +KQ + NNM K  EP I
Sbjct: 195 TSSNYDDSERKVTGGRNGYGAKLCNIFSKEFTLETSASEYGKVFKQTWVNNMSKDGEPKI 254

Query: 205 SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
           +     D +T+V+F+PDLAKF MT L+DD+VALM +R  D+AG   + VKV LN  ++PV
Sbjct: 255 TTSSRED-FTRVTFRPDLAKFKMTELDDDIVALMCRRAYDIAGS-TRGVKVFLNNKQIPV 312

Query: 265 KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIK 313
           + F +YV+ Y K        +    +E V+ RWE+ +T+S+  FQQVSF N IAT K
Sbjct: 313 QGFKQYVEQYVKHNVDSNGEAYKVVYESVSSRWEVALTVSDKGFQQVSFTNSIATTK 369


>gi|242095824|ref|XP_002438402.1| hypothetical protein SORBIDRAFT_10g016438 [Sorghum bicolor]
 gi|241916625|gb|EER89769.1| hypothetical protein SORBIDRAFT_10g016438 [Sorghum bicolor]
          Length = 396

 Score =  338 bits (867), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 214/549 (38%), Positives = 290/549 (52%), Gaps = 159/549 (28%)

Query: 304 SFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPA 363
           +FVNG+  I+GG   D +   V  H+ + + +K KN      +VK+HLW F+NA  D P 
Sbjct: 2   NFVNGV-VIEGGVQFDTITRHVEEHLKSSIKRKMKNVQ-NIEDVKSHLWAFINA--DYPF 57

Query: 364 FDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKT 423
           F  +              + +++  F+ K   +  + ETL +WA  ++ ++++ N     
Sbjct: 58  FYGE-------------PQLQVAHSFIFKEIFRCALKETL-AWALKEEDENIEANQ---- 99

Query: 424 EDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLN 483
                 +K +DA  AGG +S++CTLI TEGDSAK LA+     V RD FGV  L+GKLLN
Sbjct: 100 ------TKFQDATRAGGVDSQKCTLIFTEGDSAKDLALGS---VHRDYFGVLALKGKLLN 150

Query: 484 VREASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLL 540
           VR+AS  ++L+N EI N++KI+GL     YN+   +K LRYG +M+MTDQ          
Sbjct: 151 VRDASLKKILDNEEINNMRKIIGLDYKKHYNDEKDLKDLRYGKVMVMTDQ---------- 200

Query: 541 WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI--PSFLVEFITPIVKAT 598
                             D DG HIKGL+IN  H FWPSLLKI   SFL + +TP+V   
Sbjct: 201 ------------------DPDGFHIKGLIINLFHVFWPSLLKIKSKSFLCDLVTPLV--- 239

Query: 599 NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFV 658
                                             KGLGT T KEG +YF++I +H+K FV
Sbjct: 240 ----------------------------------KGLGTRTLKEGMQYFKDIDIHQKYFV 265

Query: 659 WEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADL 718
           W +++D +AI+ AFSK K+E RK+W+  F                               
Sbjct: 266 WVNEEDDKAIKTAFSKHKVEERKEWIYNF------------------------------- 294

Query: 719 QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
                  +   K  Q    F +F         VA+ S Y       HHG+++L++TI+ M
Sbjct: 295 -------LHNCKVAQ----FAAF---------VAECSAY-------HHGKENLSNTIVRM 327

Query: 779 AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
           AQDFVGSNNINLL+PNGQFGTR +GGKDAASARYIFT LS ITR +F + DD LLDYL+E
Sbjct: 328 AQDFVGSNNINLLRPNGQFGTRLEGGKDAASARYIFTELSSITRRIFNESDDILLDYLSE 387

Query: 839 DGQQIEPTW 847
           DGQ IEP+W
Sbjct: 388 DGQSIEPSW 396


>gi|238592069|ref|XP_002392796.1| hypothetical protein MPER_07581 [Moniliophthora perniciosa FA553]
 gi|215459345|gb|EEB93726.1| hypothetical protein MPER_07581 [Moniliophthora perniciosa FA553]
          Length = 321

 Score =  334 bits (857), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 161/288 (55%), Positives = 211/288 (73%), Gaps = 7/288 (2%)

Query: 693 LDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVA 752
            D + + I YS+F+NKELILFSMAD  RSIPS+ DGLKPGQRK+++  FKRNF KE KV 
Sbjct: 28  FDHRIEEIPYSEFINKELILFSMADNVRSIPSVADGLKPGQRKVIWGCFKRNFKKEIKVM 87

Query: 753 QFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARY 812
           Q  GYVSE + YHHGEQSL  TI+ +AQDFVGSNNINLL PNGQ+GTR+QGGKD ASARY
Sbjct: 88  QLVGYVSEKAVYHHGEQSLMMTIVNLAQDFVGSNNINLLMPNGQYGTRDQGGKDHASARY 147

Query: 813 IFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIP 872
           I T  S + R +F +DDD LL    ++   IEP WYMP++P VL+NG+EGIGTGWS+ IP
Sbjct: 148 INTLPSLMARTIFHQDDDVLLTPQKDENHIIEPEWYMPVLPMVLINGAEGIGTGWSTNIP 207

Query: 873 NYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTL 932
            YNPRDIV N++RL+NGE + PMHPW+RGF G + K  SK     Y VTGI  +++++T+
Sbjct: 208 CYNPRDIVDNLKRLMNGEEVVPMHPWWRGFKGEV-KFVSKNK---YDVTGIATKIDDSTV 263

Query: 933 RIKELPIRRWTQDYREFLESII---DQNDSFIRGFRQYSDDTTVDFEV 977
            I ELPI +WTQ+++  LE+++      +  I+ ++++  +  V F +
Sbjct: 264 EITELPIHKWTQNFKAELEAMMVGEKGAEGSIKNYQEHHANQDVHFVI 311


>gi|443704734|gb|ELU01637.1| hypothetical protein CAPTEDRAFT_188478, partial [Capitella teleta]
          Length = 321

 Score =  333 bits (853), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 166/297 (55%), Positives = 213/297 (71%), Gaps = 11/297 (3%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPDTYIGS E  TQ +W+++   + M+ R I++VPGLYKIFDE
Sbjct: 27  SVERIYQKKTQLEHILLRPDTYIGSTEPVTQLMWVWDAADECMVQREITFVPGLYKIFDE 86

Query: 86  ILVNAADNKQRDPK-MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
           ILVNAADNK RDPK M+ +K+ ID E + I + N+G G+PV  HQ+E +YVP LIFGHLL
Sbjct: 87  ILVNAADNKMRDPKGMNTIKIDIDSESNKIKIWNNGKGIPVVEHQKEKMYVPTLIFGHLL 146

Query: 145 TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
           TSSNYDD  KK  GGRNGYGAKL NIFS++FI+ET+  +  K +KQ ++ NM K  E  I
Sbjct: 147 TSSNYDDTEKKVVGGRNGYGAKLCNIFSSKFIVETSSHEYKKAFKQSWSANMMKAGEVKI 206

Query: 205 SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
              K GD++T ++F PDLAKF M  L+ D +AL  +R  D+ G   K VKV LNG R+P+
Sbjct: 207 IPSK-GDDYTCITFHPDLAKFKMEKLDADTIALFTRRAYDMCGS-SKGVKVFLNGKRLPI 264

Query: 265 KSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIK 313
           K F +YVD+Y K+        +   HE VN+RWE+ +TLS+  FQQVSFVN IAT K
Sbjct: 265 KGFKDYVDLYIKNKMDDTNTPLKLVHEVVNDRWEVGITLSDKGFQQVSFVNSIATTK 321


>gi|312101616|ref|XP_003149691.1| hypothetical protein LOAG_14142 [Loa loa]
          Length = 421

 Score =  325 bits (834), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 176/394 (44%), Positives = 243/394 (61%), Gaps = 14/394 (3%)

Query: 109 QEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLT 168
           +E + IS+ N+G G+PVEIH  EGVYVP +IFG L TSSNYDD+  K  GGRNG+GAKL 
Sbjct: 22  REKNTISIWNNGRGIPVEIHPTEGVYVPTMIFGTLFTSSNYDDSELKIVGGRNGFGAKLC 81

Query: 169 NIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKC-KEGDNWTKVSFKPDLAKFNM 227
           NIFSTEF +ET   +   ++ Q +  NM    +P IS       ++T V+FKPDL+KF +
Sbjct: 82  NIFSTEFCVETCTKQSGLRFFQCWRKNMNDVDDPIISNVDTNASDYTCVTFKPDLSKFKL 141

Query: 228 THLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHE---- 283
           + L++D + +M +R VD+AG L   V V LNG ++ V  F +YV ++  + +   E    
Sbjct: 142 STLDEDTIEVMIRRTVDIAGTL-DGVHVFLNGTKIEVSGFEDYVKLFSTNTSENFENFTV 200

Query: 284 ----RVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN 339
                VN RW+I V  S   +   SFVN I T+KGG HVDY+ NQ+ + +   + ++   
Sbjct: 201 PSYCNVNNRWQIAVARSNDGYNHTSFVNNINTLKGGRHVDYIMNQLVSRLKQEIRQRCDC 260

Query: 340 AN-VKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSG 398
              +  H VKN L +FVN+LI+NPAF+SQ+KE LT     FGS C + E F +     S 
Sbjct: 261 EKLISTHQVKNRLHIFVNSLIENPAFESQSKEYLTTSVKDFGSTCIIPESFYENFFKDSD 320

Query: 399 IVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKA 458
           I+  LL   + + +  L ++      D   +SKLEDA  AG +N   CTLI+TEGDSAKA
Sbjct: 321 IIHYLLCDISEQHTASLNRSIKRPLWD---LSKLEDAVDAGTKNGYNCTLIVTEGDSAKA 377

Query: 459 LAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
           LA+AGL+V+GR ++GVFP+RGKL NVR   +  V
Sbjct: 378 LAVAGLAVIGRKQYGVFPVRGKLTNVRGMDAKMV 411


>gi|395326357|gb|EJF58767.1| hypothetical protein DICSQDRAFT_128647 [Dichomitus squalens
           LYAD-421 SS1]
          Length = 385

 Score =  323 bits (827), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 185/410 (45%), Positives = 248/410 (60%), Gaps = 50/410 (12%)

Query: 30  MYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVN 89
           M  K SQ+EHI  RPDT                          + YV   +KI DEILVN
Sbjct: 1   MSTKLSQMEHIPKRPDT------------------------SEVKYVLEFFKIVDEILVN 36

Query: 90  AADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
           AA +K  DP M  +KV ID E+++ISV N+G G+P+EIH EE +Y+PELIFGHL +SS  
Sbjct: 37  AAVHKINDPSMVIIKVTIDIENNMISVCNNGRGIPIEIHSEETIYIPELIFGHL-SSSED 95

Query: 150 DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
           D   KK TGGRNG GA L NI+STEF +ET D    +KY Q +T NM K  +  I+K + 
Sbjct: 96  DGKGKKLTGGRNGDGATLANIYSTEFTVETVDKITSQKYVQTWTENMNKVGKAKITKNER 155

Query: 210 GDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAE 269
           G+ +T+V+FK DL +  M  ++DD  +L++KRV DLAG + K VKV LN  ++ +K+F E
Sbjct: 156 GEEYTRVTFKSDLKRCGMKSIDDDAASLLEKRVYDLAGTV-KDVKVFLNEEQLKIKNFKE 214

Query: 270 YVDMYPKS----------------VTRFHERV-NERWEICVTLSEGQFQQVSFVNGIATI 312
           YV+++ KS                    HE +   RWE+    S+G FQQVSFVN I+T 
Sbjct: 215 YVELFVKSSAEAAANDTDGAAQLETCVIHESLAGGRWEVACAASDGAFQQVSFVNLISTS 274

Query: 313 KGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETL 372
           KGGTHV+++A+Q+  H++  V K    A  +   +KNH+W+F      NP FDSQ KETL
Sbjct: 275 KGGTHVNHIADQITEHLVTAVAKNMAAAAARPAQIKNHMWIF------NPTFDSQAKETL 328

Query: 373 TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
           TL  S FGS+  LSE F++KV AKS IV+ +L+WA  K  +  KK DG++
Sbjct: 329 TLPASKFGSEPRLSEVFMEKV-AKSSIVDHVLNWAELKADRRPKKTDGSQ 377


>gi|297790981|ref|XP_002863375.1| hypothetical protein ARALYDRAFT_916718 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309210|gb|EFH39634.1| hypothetical protein ARALYDRAFT_916718 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 286

 Score =  318 bits (814), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 154/273 (56%), Positives = 192/273 (70%), Gaps = 11/273 (4%)

Query: 688 EPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIK 747
           +P  HLD+    I Y DF+N ELI F  A+L+R IPS+ DGLK   RKILF  FK N  K
Sbjct: 2   QPDTHLDRSITRISYHDFINFELIYFFQANLERCIPSVADGLKLSSRKILFTLFKCN--K 59

Query: 748 EAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGS-NNINLLQPNGQFGTRNQGGKD 806
           +  V Q +  VS+  +YHH +QSLA TI+ MAQD+VGS NN+NLL P+GQFG+R  GGKD
Sbjct: 60  KVTVEQLASDVSKTCSYHHSQQSLAKTIVRMAQDYVGSPNNVNLLDPDGQFGSRISGGKD 119

Query: 807 AASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTG 866
           A++ +YIFT LS + R LFP DDD  L YL EDG+ IEP  YMP+IPTVLVNG+ G+G+G
Sbjct: 120 ASNPKYIFTELSVMARVLFPNDDDVHLQYLKEDGKTIEPLCYMPVIPTVLVNGARGVGSG 179

Query: 867 WSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEK--------TASKEAGVTY 918
           WS++IP Y+PR+I  N+RRLL GE+M  M PWYR F GTIEK        TASKE   TY
Sbjct: 180 WSTFIPKYDPREIAENIRRLLKGEVMIAMDPWYRKFKGTIEKVKSKAGVTTASKEGPCTY 239

Query: 919 TVTGIIEEVNETTLRIKELPIRRWTQDYREFLE 951
             +G+ E +NETTL I ELP+ +WT+ Y  FL+
Sbjct: 240 KTSGLFEVINETTLVITELPVYKWTKKYISFLQ 272


>gi|321470330|gb|EFX81307.1| hypothetical protein DAPPUDRAFT_317722 [Daphnia pulex]
          Length = 591

 Score =  316 bits (810), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 184/473 (38%), Positives = 280/473 (59%), Gaps = 20/473 (4%)

Query: 720  RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
             SIPS++DGL+P QRK+LF  FKRN   + +V + +G V+  SAY  GE SL  TI+G+A
Sbjct: 5    HSIPSVMDGLRPTQRKVLFTCFKRNDKDKVEVIKLAGSVAADSAYREGEASLMGTIIGLA 64

Query: 780  QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
            QDFVGSNN+NLL P G+FGTR++GGKDAAS+RY+ T LS + RF+F   DD LL +  + 
Sbjct: 65   QDFVGSNNLNLLVPIGEFGTRHEGGKDAASSRYLSTVLSELARFIFHPSDDPLLKHQIDS 124

Query: 840  GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
             ++IEP  Y+PIIP +L+NG+ GIGTG       +NPR IV  +++ L+G+   P++ W 
Sbjct: 125  NEEIEPESYVPIIPMILINGTSGIGTGGMIDFLKFNPRHIVDFLKQKLDGKQPLPINLWL 184

Query: 900  RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYR-EFLESII---D 955
            +GF G IE +   +    YT +G    ++ T + I ELP   WT +Y+   +E ++   +
Sbjct: 185  KGFTGKIEGSGDNQ----YTSSGNYAVLSSTQVEITELPFGVWTHNYKISVIEKLLRGSE 240

Query: 956  QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
            +    I  F+++    TV F V +SE  M + K EGL K F+L +T   ++M L D  G 
Sbjct: 241  EMSPLITDFQEHHTGNTVKFTVTMSEAKMRQAKDEGLYKAFQLQSTHYITSMVLCDPSGS 300

Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
             K Y + +QILE+F+ +RL+ YEKRK      L+    KL N+ RF+  V++  ++V N+
Sbjct: 301  PKIYYSYQQILEDFYPVRLKLYEKRKNYFSGYLQAISKKLSNQFRFVCEVIDDVLIVFNK 360

Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMA 1135
                 + +LR + + P P +       V   T+  + ++E+      VQ+ DY+YLL M 
Sbjct: 361  GNILEVEDLRHRNYDPDPVS-------VWKRTNNRKVTDED---AGEVQTGDYNYLLHMF 410

Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSD 1188
                +L+  Q LL  RD   +E D L K +   LW++DL+   + L E++ ++
Sbjct: 411  --DFSLDSKQKLLKKRDFYVKEYDILLKKSASDLWLEDLEQFMVVLKEVEDAE 461


>gi|448925659|gb|AGE49238.1| DNA topoisomerase II [Acanthocystis turfacea Chlorella virus Br0604L]
          Length = 355

 Score =  315 bits (807), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 175/400 (43%), Positives = 246/400 (61%), Gaps = 47/400 (11%)

Query: 778  MAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLN 837
            MAQD+VGSNNINLL P GQFG+R  GGKD+ASARYIFT+LSP TR +F K D++LL+YL 
Sbjct: 1    MAQDYVGSNNINLLLPRGQFGSRLHGGKDSASARYIFTQLSPNTRDIFHKADERLLNYLE 60

Query: 838  EDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHP 897
            +DG +IEP +Y+P IP +LVNGS GIGTG+S+ IP YNP+DIV NV+RL+N E M PM P
Sbjct: 61   DDGDRIEPEYYVPTIPFLLVNGSSGIGTGFSTNIPAYNPKDIVDNVKRLINNETMLPMTP 120

Query: 898  WYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN 957
            WYRGF G I++T+    GV +T +G+  ++   T+ + ELP+  WT DY+E LE++I++ 
Sbjct: 121  WYRGFKGDIKETS---PGV-FTCSGVY-DIKGKTVTVSELPVGTWTNDYKEHLETLIEK- 174

Query: 958  DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIK 1017
               +  FR+   +  V FE+       + T    +L   KL +TI T+NMH FD  G IK
Sbjct: 175  -KIVADFRERHTELNVHFEI-----DFVGTLDPNIL---KLESTIRTTNMHAFDPSGKIK 225

Query: 1018 KYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
            KYD+P +I+ ++F  R EFY KRK+  L +L+  +L  +NK  FI  V +G +V+  R  
Sbjct: 226  KYDSPLEIITDWFSTRKEFYVKRKEDLLRDLKARVLVAQNKSSFISSVNDGSLVITRRAE 285

Query: 1078 TDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIG 1137
             D++ +L +  F             V G+                     ++YLL M I 
Sbjct: 286  DDVVKDLNKMKFDK-----------VGGS---------------------FEYLLGMKIS 313

Query: 1138 TLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            +LT E+ + L A+   L EE+  L+  T E +WV D+DA+
Sbjct: 314  SLTKERAEKLQAEAATLEEELAALKNTTTEQMWVSDIDAI 353


>gi|229891674|sp|P0C9C0.1|TOP2_ASFP4 RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
          Length = 1192

 Score =  313 bits (803), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 320/1218 (26%), Positives = 535/1218 (43%), Gaps = 193/1218 (15%)

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQ----RDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
            IHR   + P L KIFDEI+VNA D+++    +  K+  +K+  D+   + S  N G G+P
Sbjct: 46   IHR--DHCPALLKIFDEIIVNATDHERACHSKTKKVTYIKISFDK--GVFSCENDGPGIP 101

Query: 125  VEIHQEEG------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
            +  H++        VYVPE+   H L  +N +       GG NG G KL  + S   I+ 
Sbjct: 102  IAKHEQASLIAKRDVYVPEVASCHFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILT 161

Query: 179  TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHL-----EDD 233
            TADG   +KY Q     +     P I+  +E   +T++   P   +           + D
Sbjct: 162  TADGA--QKYVQHINQRLDIIEPPTITPSRE--MFTRIELMPVYQELGYAEPLSETEQAD 217

Query: 234  VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP--------------KSVT 279
            + A +  R    A  +GK   +  N       S      MY               K+  
Sbjct: 218  LSAWIYLRACQCAAYVGKGTTIYYNDKPCRTGSVMALAKMYTLLSAPNSTIHTATIKADA 277

Query: 280  RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK--KN 337
            + +     +    V+    +F+ VS +NG+  +K G HV ++   +   V+    +  K+
Sbjct: 278  KPYSLHPLQVAAVVSPKFKKFEHVSVINGVNCVK-GEHVTFLKKTINEMVVKKFQQTIKD 336

Query: 338  KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKS 397
            KN      +  +++++ +   I    +  Q K+ L++ ++ F +   +   FL  +T   
Sbjct: 337  KNRKTTLRDSCSNIFIVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTSMT--K 394

Query: 398  GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAK 457
             IV+ LL        + + K D  K  DV    K   A  AGG+ ++ C L+  EGDSA 
Sbjct: 395  SIVDILL--------QSISKKDNHKQVDV---DKYTRARNAGGKRAQDCMLLAAEGDSAL 443

Query: 458  ALAMAGLSVVGR--------DRFGVFPLRGKLLNVREASSN--------------QVLNN 495
            +L   GL+ +G+        D  G+  L G ++N  +  +N              Q+ NN
Sbjct: 444  SLLRTGLT-LGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNN 502

Query: 496  SEIGNIKKILGLKQGVEYNNVK---SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              +  I ++LGL     Y   +    LRYG ++   D                       
Sbjct: 503  KVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVD----------------------- 539

Query: 553  CFMLAQDHDGS-HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV-LSFYSM 610
                 QD DG   I GLL+ + H FWP L+ I  F+   +TP+++   K   V + FY  
Sbjct: 540  -----QDLDGCGKILGLLLAYFHLFWPQLI-IHGFVKRLLTPLIRVYEKGKTVPVEFYYE 593

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---DDQDGEA 667
             +++AW +     A+  ++KYYKGL    + E K  F+    H  + V+    DD   E 
Sbjct: 594  QEFDAWAKKQTSLANH-TVKYYKGLAAHDTHEVKSMFK----HFDNMVYTFTLDDSAKEL 648

Query: 668  IELAFSKKKIEARKKWLLQ-----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
              + F  +  E RK+ L        E         + I  S  +  +   + +  ++R I
Sbjct: 649  FHIYFGGES-ELRKRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQI 707

Query: 723  PSMVDGLKPGQRKILF----CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
            P+ +DG+   +RKIL     C    N  +E KV QF GYV++H  YHHG+ SL ++I+  
Sbjct: 708  PNFLDGMTRARRKILAGGVKCFASNN--RERKVFQFGGYVADHMFYHHGDMSLNTSIIKA 765

Query: 779  AQDFVGSNNIN-LLQPNGQFGTRNQGGKDAASARYIFTRL-SPITRFLFPKDDDKLLDYL 836
            AQ + GS+++  +    G FG+R+ GGKDA S RYI  +L S   + +FP +D  LL Y+
Sbjct: 766  AQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPYV 825

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-----GEM 891
             EDGQ+ EP +Y+P++P  ++        GW          DI+A VR  ++      E+
Sbjct: 826  FEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKNNPKHEL 885

Query: 892  ME----------PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
            +           P+ P    F G +++    +   +Y    I E+ N  T  I ELP+R 
Sbjct: 886  LHYAIKHKITILPLRPSNYNFKGHLKRFG--QYYYSYGTYVISEQRNIIT--ITELPLRV 941

Query: 942  WTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR-------TKQEGL 992
             T  Y   +ESI   ++  +FI     YS   T++  V L   S+ R       T+++  
Sbjct: 942  PTVAY---IESIKKSSNRMTFIEEIIDYSSSETIEILVKLKPNSLNRIMEEFKCTEEQDS 998

Query: 993  LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
            ++ F        S+++    KG I +++T  +IL  +   R E Y+KR   +   L+L +
Sbjct: 999  IENFLRLRNCLHSHLNFVKPKGGIIEFNTYYEILYAWLPYRRELYQKRLMREHAVLKLRI 1058

Query: 1053 LKLENKVRFI--LGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDET 1110
            +     VR+I     +N     + ++ + +L E    GF P  +       +++      
Sbjct: 1059 IMETAIVRYINESAELNLSHYEDEKEASRILSE---HGFPPLNQT-----LIISPEFASI 1110

Query: 1111 EESEENPEVVNGVQSIDYDYLLSM-------AIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
            EE   N + + G     Y Y+LS+       A  T  +EK++ + A  DK    V+ L +
Sbjct: 1111 EEL--NQKALQGC----YTYILSLQARELLIAAKTRRVEKIKKMQARLDK----VEQLLQ 1160

Query: 1164 ATP---ESLWVKDLDALD 1178
             +P    S+W++++DA++
Sbjct: 1161 ESPFPGASVWLEEIDAVE 1178


>gi|229891673|sp|P0C9C2.1|TOP2_ASFK5 RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
          Length = 1192

 Score =  313 bits (803), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 321/1219 (26%), Positives = 538/1219 (44%), Gaps = 195/1219 (15%)

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQ----RDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
            IHR   + P L KIFDE++VNA D+++    +  K+  +K+  D+   + S  N G G+P
Sbjct: 46   IHR--DHCPALLKIFDELIVNATDHERACHNKTKKVTYIKISFDK--GVFSCENDGPGIP 101

Query: 125  VEIHQEEG------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
            +  H++        VYVPE+   + L  +N +       GG NG G KL  + S   I+ 
Sbjct: 102  IVKHEQASLIAKRDVYVPEVASCYFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILT 161

Query: 179  TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHL-----EDD 233
            TADG   +KY Q     +     P I+  +E   +T++   P   +           + D
Sbjct: 162  TADGA--QKYVQHINQRLDNIEPPTITPSRE--MFTRIELMPVYQELGYAQPLSETEQAD 217

Query: 234  VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY-----PKSVTRFHERVN-- 286
            + A +  R    A  +GK   +  N       S      MY     P S T +   +   
Sbjct: 218  LSAWIYLRACQCAAYVGKGTTIYYNDKPCSTSSVMALAKMYTLVTAPNS-TIYTTTIKAD 276

Query: 287  ------ERWEICVTLSEG--QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK--K 336
                     ++   +S    +F+ VS +NG+  +KG  HV ++   +   V+    +  K
Sbjct: 277  AKPYSLHPLQVAAVVSPKFKKFEHVSIINGVNCVKG-EHVTFLKKAINEMVVKKFQQTVK 335

Query: 337  NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAK 396
            +KN      +  ++++V +   I    +  Q K+ L++ ++ F +   +   FL  +T  
Sbjct: 336  DKNRKTTLRDSCSNIFVVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTSMT-- 393

Query: 397  SGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSA 456
              IV+ LL        + + K D  K  DV    K   A  AGG+ ++ C L+  EGDSA
Sbjct: 394  RSIVDILL--------QSISKKDNHKQIDV---DKYTRARNAGGKKAQDCMLLAAEGDSA 442

Query: 457  KALAMAGLSVVGR--------DRFGVFPLRGKLLNVREASSN--------------QVLN 494
             +L  AGL+ +G+        D  G+  L G ++N  +  +N              Q+ N
Sbjct: 443  LSLLRAGLT-LGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTN 501

Query: 495  NSEIGNIKKILGLKQGVEYNNVK---SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
            N  +  I ++LGL     Y   +    LRYG ++   D                      
Sbjct: 502  NKVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVD---------------------- 539

Query: 552  FCFMLAQDHDGS-HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV-LSFYS 609
                  QD DG   I GLL+ + H FWP L+ +  F+   +TP+++   K   V + FY 
Sbjct: 540  ------QDLDGCGKILGLLLAYFHLFWPQLI-VHGFVKRLLTPLIRVYEKGNTVPVEFYY 592

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
              +++AW +     A+  ++KYYKGL    + E K  F++       F   DD   E   
Sbjct: 593  EQEFDAWAKKQTSLANH-TVKYYKGLAAHDTHEVKSMFKHFDKMVYTFTL-DDSAKELFH 650

Query: 670  LAFSKKKIEARKKWLLQ-----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPS 724
            + F  +  E RK+ L        E         + I  S  +  +   + +  ++R IP+
Sbjct: 651  IYFGGES-ELRKRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQIPN 709

Query: 725  MVDGLKPGQRKILF----CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
             +DG+   +RKIL     C    N  +E KV QF GYV++H  YHHG+ SL ++I+  AQ
Sbjct: 710  FLDGMTRARRKILAGGLKCFASNN--RERKVFQFGGYVADHMFYHHGDMSLNTSIIKAAQ 767

Query: 781  DFVGSNNIN-LLQPNGQFGTRNQGGKDAASARYIFTRL-SPITRFLFPKDDDKLLDYLNE 838
             + GS+++  +    G FG+R+ GGKDA S RYI  +L S   + +FP +D  LL Y+ E
Sbjct: 768  YYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPYVFE 827

Query: 839  DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-----GEMME 893
            DGQ+ EP +Y+P++P  ++        GW          DI+A VR  ++      E++ 
Sbjct: 828  DGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYIDKNNPKHELLH 887

Query: 894  ----------PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWT 943
                      P+ P    F G +++    +   +Y    + E+ N  T  I ELP+R  T
Sbjct: 888  YAIDHKITVLPLRPSNYNFKGHLKRFG--QYYYSYGTYVVSEQRNMIT--ITELPLRVPT 943

Query: 944  QDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR-------TKQEGLLK 994
              Y   +ESI   ++  +FI     YS   T++  V L   S+ R       T+++  ++
Sbjct: 944  VAY---IESIKKSSNRMAFIEEIVDYSSSETIEILVKLKPNSLSRIIEEFKETEEQNSIE 1000

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             F        S+++    KG I ++++  +IL  +   R + Y+KR   +   L+L ++ 
Sbjct: 1001 NFLRLRNCLHSHLNFVKPKGGIIEFNSYYEILYAWLPYRRDLYQKRLMRERAVLKLRIIM 1060

Query: 1055 LENKVRFI-----LGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDE 1109
                VR+I     L + + E    + K    +L   + GF P    ++S+      AT E
Sbjct: 1061 ETAIVRYINESADLNLSHYE----DEKEAGRILS--EHGFPPL---NQSLITSPEFATIE 1111

Query: 1110 TEESEENPEVVNGVQSIDYDYLLSM-------AIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
                E N + + G     Y Y+LS+       A  T  +EK++ + A  DK    V+ L 
Sbjct: 1112 ----ELNQKALQGC----YTYILSLQARELLIAAKTRRVEKIKKMQARLDK----VEQLL 1159

Query: 1163 KATP---ESLWVKDLDALD 1178
            + +P    S+W++++DA++
Sbjct: 1160 QESPFPGASVWLEEIDAVE 1178


>gi|303398797|emb|CBW46778.1| P1192R [African swine fever virus Georgia 2007/1]
          Length = 1192

 Score =  312 bits (800), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 322/1219 (26%), Positives = 536/1219 (43%), Gaps = 195/1219 (15%)

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQ----RDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
            IHR   + P L KIFDEI+VNA D+++    +  K+  +K+  D+   + S  N G G+P
Sbjct: 46   IHR--DHCPALLKIFDEIIVNATDHERACHNKTKKVTYIKISFDK--GVFSCENDGPGIP 101

Query: 125  VEIHQEEG------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
            +  H++        VYVPE+   H L  +N +       GG NG G KL  + S   I+ 
Sbjct: 102  IAKHEQASLIAKRDVYVPEVASCHFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILT 161

Query: 179  TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHL-----EDD 233
            TADG   +KY Q     +     P I+  +E   +T++   P   +           + D
Sbjct: 162  TADGA--QKYVQHINQRLDIIEPPTITPSRE--MFTRIELMPVYQELGYAEPLSETEQAD 217

Query: 234  VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP--------------KSVT 279
            + A +  R    A  +GK   +  N       S      MY               K+  
Sbjct: 218  LSAWIYLRACQCAAYVGKGTTIYYNDKPCRTGSVMALAKMYTLLSAPNSTIHTATIKADA 277

Query: 280  RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK--KN 337
            + +     +    V+    +F+ VS +NG+  +K G HV ++   +   V+    +  K+
Sbjct: 278  KPYSLHPLQVAAVVSPKFKKFEHVSVINGVNCVK-GEHVTFLKKTINEMVVKKFQQTIKD 336

Query: 338  KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKS 397
            KN      +  +++++ +   I    +  Q K+ L++ ++ F +   +   FL  +T   
Sbjct: 337  KNRKTTLRDSCSNIFIVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTSMT--K 394

Query: 398  GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAK 457
             IV+ LL        + + K D  K  DV    K   A  AGG+ ++ C L+  EGDSA 
Sbjct: 395  SIVDILL--------QSISKKDNHKQVDV---DKYTRARNAGGKRAQDCMLLAAEGDSAL 443

Query: 458  ALAMAGLSVVGR--------DRFGVFPLRGKLLNVREASSN--------------QVLNN 495
            +L   GL+ +G+        D  G+  L G ++N  +  +N              Q+ NN
Sbjct: 444  SLLRTGLT-LGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNN 502

Query: 496  SEIGNIKKILGLKQGVEYNNVK---SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              +  I ++LGL     Y   +    LRYG ++   D                       
Sbjct: 503  KVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVD----------------------- 539

Query: 553  CFMLAQDHDGS-HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL--SFYS 609
                 QD DG   I GLL+ + H FWP L+ I  F+   +TP+++   K GK +   FY 
Sbjct: 540  -----QDLDGCGKILGLLLAYFHLFWPQLI-IHGFVKRLLTPLIRVYEK-GKTMPVEFYY 592

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---DDQDGE 666
              +++AW +     A+  ++KYYKGL    + E K  F+    H  + V+    DD   E
Sbjct: 593  EQEFDAWAKKQTSLANH-TVKYYKGLAAHDTHEVKSMFK----HFDNMVYTFTLDDSAKE 647

Query: 667  AIELAFSKKKIEARKKWLLQ-----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
               + F  +  E RK+ L        E         + I  S  +  +   + +  ++R 
Sbjct: 648  LFHIYFGGES-ELRKRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQ 706

Query: 722  IPSMVDGLKPGQRKILF----CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
            IP+ +DG+   +RKIL     C    N  +E KV QF GYV++H  YHHG+ SL ++I+ 
Sbjct: 707  IPNFLDGMTRARRKILAGGVKCFASNN--RERKVFQFGGYVADHMFYHHGDMSLNTSIIK 764

Query: 778  MAQDFVGSNNIN-LLQPNGQFGTRNQGGKDAASARYIFTRL-SPITRFLFPKDDDKLLDY 835
             AQ + GS+++  +    G FG+R+ GGKDA S RYI  +L S   + +FP +D  LL Y
Sbjct: 765  AAQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPY 824

Query: 836  LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-----GE 890
            + EDGQ+ EP +Y+P++P  ++        GW          DI+A VR  ++      E
Sbjct: 825  VFEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKDNPKHE 884

Query: 891  MME----------PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIR 940
            ++           P+ P    F G +++    +   +Y    I E+ N  T  I ELP+R
Sbjct: 885  LLHYAIKHKITILPLRPSNYNFKGHLKRFG--QYYYSYGTYVISEQRNIIT--ITELPLR 940

Query: 941  RWTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR-------TKQEG 991
              T  Y   +ESI   ++  +FI     YS   T++  V L   S+ R       T+++ 
Sbjct: 941  VPTVAY---IESIKKSSNRMTFIEEIIDYSSSETIEILVKLKPNSLNRIVEEFKETEEQD 997

Query: 992  LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
             ++ F        S+++    KG I +++T  +IL  +   R E Y+KR   +   L+L 
Sbjct: 998  SIENFLRLRNCLHSHLNFVKPKGGIIEFNTYYEILYAWLPYRRELYQKRLMREHAVLKLR 1057

Query: 1052 LLKLENKVRFI--LGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDE 1109
            ++     VR+I     +N     + ++ + +L E    GF P   N   I +    + +E
Sbjct: 1058 IIMETAIVRYINESAELNLSHYEDEKEASRILSE---HGFPPL--NHTLIISPEFASIEE 1112

Query: 1110 TEESEENPEVVNGVQSIDYDYLLSM-------AIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
                  N + + G     Y Y+LS+       A  T  +EK++ + A  DK    V+ L 
Sbjct: 1113 L-----NQKALQGC----YTYILSLQARELLIAAKTRRVEKIKKMQARLDK----VEQLL 1159

Query: 1163 KATP---ESLWVKDLDALD 1178
            + +P    S+W++++DA++
Sbjct: 1160 QESPFPGASVWLEEIDAVE 1178


>gi|464905|sp|P34203.1|TOP2_ASFM2 RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|58648|emb|CAA78614.1| DNA topoisomerase type II [African swine fever virus]
 gi|450712|emb|CAA50820.1| DNA topoisomerase type II [African swine fever virus]
          Length = 1191

 Score =  312 bits (800), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 320/1221 (26%), Positives = 540/1221 (44%), Gaps = 200/1221 (16%)

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQ----RDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
            IHR   + P L KIFDE++VNA D+++    +  K+  +K+  D+   + +  N G G+P
Sbjct: 46   IHR--DHCPALLKIFDELIVNATDHERACHSKTKKVTYIKISFDK--GVFACENDGPGIP 101

Query: 125  VEIHQEEG------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
            +  H++        VYVPE+   H L  +N +       GG NG G KL  + S   I+ 
Sbjct: 102  IAKHEQASLIAKRDVYVPEVASCHFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILT 161

Query: 179  TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHL-----EDD 233
            TADG   +KY Q     +     P I+  +E   +T++   P   +           + D
Sbjct: 162  TADGA--QKYVQHINQRLDIIEPPTITPSRE--MFTRIELMPVYQELGYAQPLSETEQAD 217

Query: 234  VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP--------------KSVT 279
            + A +  R    A  +GK   +  N       S      MY               K+  
Sbjct: 218  LSAWIYLRACQCAAYVGKGTTIYYNDKPCNTGSVMALAKMYTLLSAPNSTIHTTAIKADA 277

Query: 280  RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK--KN 337
            + +     +    V+    +F+ VS +NG+  +K G HV ++   +   V+    +  K+
Sbjct: 278  KPYSLHPLQVAAVVSPKFKKFEHVSIINGVNCVK-GEHVTFLKKTINEMVVKKFQQTIKD 336

Query: 338  KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKS 397
            KN      +  ++++V +   I    +  Q K+ L++ ++ F +   +   FL  +T   
Sbjct: 337  KNRKTTLRDSCSNIFVVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTNMT--R 394

Query: 398  GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAK 457
             IV+ LL        + + K D  K  DV    K   AN AGG+ ++ C L+  EGDSA 
Sbjct: 395  SIVDILL--------QSISKKDNHKQVDV---DKYTRAN-AGGKKAQDCMLLAAEGDSAL 442

Query: 458  ALAMAGLSVVGR--------DRFGVFPLRGKLLNVREASSN--------------QVLNN 495
            +L  AGL+ +G+        D  G+  L G ++N  +  +N              Q+ NN
Sbjct: 443  SLVRAGLT-LGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNN 501

Query: 496  SEIGNIKKILGLKQGVEYNNVK---SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              +  I ++LGL     Y   +    LRYG ++   D                       
Sbjct: 502  KVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVD----------------------- 538

Query: 553  CFMLAQDHDGS-HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV-LSFYSM 610
                 QD DG   I GLL+ + H FWP L+ I  F+   +TP+++   K   V + FY  
Sbjct: 539  -----QDLDGCGKILGLLLAYFHLFWPQLI-IHGFVKRLLTPLIRVYEKGKTVPVEFYYE 592

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---DDQDGEA 667
             +++AW +     A+  ++KYYKGL    + E K  F+    H  + V+    DD   E 
Sbjct: 593  QEFDAWAKKQTSLANH-TVKYYKGLAAHDTHEVKSMFK----HFDNMVYTFTLDDSAKEL 647

Query: 668  IELAFSKKKIEARKKWLLQ-----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
              + F  +  E RK+ L        E        ++ I  S  +  +   + +  ++R I
Sbjct: 648  FHIYFGGES-ELRKRELCTGVVPLTETQTQSIHSDRQIPCSLHLQVDTKAYKLDAIERQI 706

Query: 723  PSMVDGLKPGQRKILF----CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
            P+ +DG+   +RKIL     C    N  +E KV QF GYV++H  YHHG+ SL ++I+  
Sbjct: 707  PNFLDGMTRARRKILAGGLKCFASNN--RERKVFQFGGYVADHMFYHHGDMSLNTSIIKA 764

Query: 779  AQDFVGSNNIN-LLQPNGQFGTRNQGGKDAASARYIFTRL-SPITRFLFPKDDDKLLDYL 836
            AQ + GS+++  +    G FG+R+ GGKDA S RYI  +L S   + +FP +D  LL Y+
Sbjct: 765  AQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPYV 824

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-----GEM 891
             EDGQ+ EP +Y+P++P  ++        GW          DI+A VR  ++      E+
Sbjct: 825  FEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKNNPKHEL 884

Query: 892  ME----------PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
            +           P+ P    F G +++    +   +Y    + E+ N  T  I ELP+R 
Sbjct: 885  LHYAIERKITVLPLRPSNYNFKGHLKRFG--QYYYSYGTYVVSEQRNIIT--ITELPLRV 940

Query: 942  WTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR-------TKQEGL 992
             T  Y   +ESI   ++  +FI     YS   T++  V L   S+ R       T+++  
Sbjct: 941  PTVAY---IESIKKSSNRMAFIEEIIDYSSSETIEILVKLKPNSLNRIVEEFKETEEQDS 997

Query: 993  LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
            ++ F        S+++    KG I ++++  +IL  +   R + Y+KR   +   L+L +
Sbjct: 998  IENFLRLRNCLHSHLNFVKPKGGIIEFNSYYEILYAWLPYRRDVYQKRLMRERAVLKLRI 1057

Query: 1053 LKLENKVRFI-----LGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGAT 1107
            +     VR+I     L + + E   + ++ + +L E    GF P   N   I +    + 
Sbjct: 1058 IMETAIVRYINESADLNLSHYE---DEKEASRILSE---HGFPPL--NQSLITSPEFASI 1109

Query: 1108 DETEESEENPEVVNGVQSIDYDYLLSM-------AIGTLTLEKVQGLLADRDKLNEEVDD 1160
            +E      N + + G     Y Y+LS+       A  T  +EK++ + A  DK    V+ 
Sbjct: 1110 EEL-----NQKALQGC----YTYILSLQARELLIAAKTRRVEKIKKMQARLDK----VEQ 1156

Query: 1161 LRKATP---ESLWVKDLDALD 1178
            L + +P    S+W++++DA++
Sbjct: 1157 LLQESPFPGASVWLEEIDAVE 1177


>gi|255553520|ref|XP_002517801.1| DNA topoisomerase II, putative [Ricinus communis]
 gi|223543073|gb|EEF44608.1| DNA topoisomerase II, putative [Ricinus communis]
          Length = 197

 Score =  311 bits (798), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 150/185 (81%), Positives = 166/185 (89%), Gaps = 9/185 (4%)

Query: 7   LPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK 66
           +PL TSNNAN        KTIEE YQKKSQLEHILLRPDTYIGSIEKHTQ LW+YE+E  
Sbjct: 8   VPLMTSNNAN-------KKTIEETYQKKSQLEHILLRPDTYIGSIEKHTQTLWVYEDEK- 59

Query: 67  TMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE 126
            M++R ++YVPGLYKIFDEILVNAADNKQRDP MDA+KVVID E+++ISV+N+GDGVPVE
Sbjct: 60  -MVNRNVTYVPGLYKIFDEILVNAADNKQRDPTMDALKVVIDVENNMISVYNNGDGVPVE 118

Query: 127 IHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLK 186
           IH+EEGVYVPELIFGHLLTSSNYDD VKKTTGGRNGYGAKLTNIFSTEF+IETADGKR K
Sbjct: 119 IHKEEGVYVPELIFGHLLTSSNYDDTVKKTTGGRNGYGAKLTNIFSTEFVIETADGKRQK 178

Query: 187 KYKQV 191
           KYKQ+
Sbjct: 179 KYKQM 183


>gi|229891675|sp|P0C9C1.1|TOP2_ASFWA RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
          Length = 1192

 Score =  311 bits (796), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 319/1218 (26%), Positives = 535/1218 (43%), Gaps = 193/1218 (15%)

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQ----RDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
            IHR   + P L KIFDEI+VNA D+++    +  K+  +K+  ++   + S  N G G+P
Sbjct: 46   IHR--DHCPALLKIFDEIIVNATDHERACHSKTKKVTYIKISFNK--GVFSCENDGPGIP 101

Query: 125  VEIHQEEG------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
            +  H++        VYVPE+   H L  +N +       GG NG G KL  + S   I+ 
Sbjct: 102  IAKHEQASLIAKRDVYVPEVASCHFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILT 161

Query: 179  TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHL-----EDD 233
            TADG   +KY Q     +     P I+  +E   +T++   P   +           + D
Sbjct: 162  TADGA--QKYVQHINQRLDIIEPPTITPSRE--MFTRIELMPVYQELGYAEPLSETEQAD 217

Query: 234  VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP--------------KSVT 279
            + A +  R    A  +GK   +  N       S      MY               K+  
Sbjct: 218  LSAWIYLRACQCAAYVGKGTTIYYNEKPCRTGSVMALAKMYTLLSAPNGTIHTATIKADA 277

Query: 280  RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK--KN 337
            + +     +    V+    +F+ VS +NG+  +K G HV ++   +   V+    +  K+
Sbjct: 278  KPYSLHPLQVAAVVSPKFKKFEHVSIINGVNCVK-GEHVTFLKKTINEIVVKKFQQTIKD 336

Query: 338  KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKS 397
            KN      +  +++++ +   I    +  Q K+ L++ ++ F +   +   FL  +T   
Sbjct: 337  KNRKTTLRDSCSNIFIVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTSMT--K 394

Query: 398  GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAK 457
             IV+ LL        + + K D  K  DV    K   A  AGG+ ++ C L+  EGDSA 
Sbjct: 395  SIVDILL--------QSISKKDNHKQVDV---DKYTRARNAGGKRAQDCMLLAAEGDSAL 443

Query: 458  ALAMAGLSVVGR--------DRFGVFPLRGKLLNVREASSN--------------QVLNN 495
            +L   GL+ +G+        D  G+  L G ++N  +  +N              Q+ NN
Sbjct: 444  SLLRTGLT-LGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNN 502

Query: 496  SEIGNIKKILGLKQGVEYNNVK---SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              +  I ++LGL     Y   +    LRYG ++   D                       
Sbjct: 503  KVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVD----------------------- 539

Query: 553  CFMLAQDHDGS-HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV-LSFYSM 610
                 QD DG   I GLL+ + H FWP L+ I  F+   +TP+++   K   V + FY  
Sbjct: 540  -----QDLDGCGKILGLLLAYFHLFWPQLI-IHGFVKRLLTPLIRVYEKGKTVPVEFYYE 593

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---DDQDGEA 667
             +++AW +     A+  ++KYYKGL    + E K  F+    H  + V+    DD   E 
Sbjct: 594  QEFDAWAKKQTSLANH-TVKYYKGLAAHDTHEVKSMFK----HFDNMVYTFTLDDSAKEL 648

Query: 668  IELAFSKKKIEARKKWLLQ-----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
              + F  +  E RK+ L        E         + I  S  +  +   + +  ++R I
Sbjct: 649  FHIYFGGES-ELRKRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQI 707

Query: 723  PSMVDGLKPGQRKILF----CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
            P+ +DG+   +RKIL     C    N  +E KV QF GYV++H  YHHG+ SL ++I+  
Sbjct: 708  PNFLDGMTRARRKILAGGVKCFASNN--RERKVFQFGGYVADHMFYHHGDMSLNTSIIKA 765

Query: 779  AQDFVGSNNIN-LLQPNGQFGTRNQGGKDAASARYIFTRL-SPITRFLFPKDDDKLLDYL 836
            AQ + GS+++  +    G FG+R+ GGKDA S RYI  +L S   + +FP +D  LL Y+
Sbjct: 766  AQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPYV 825

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-----GEM 891
             EDGQ+ EP +Y+P++P  ++        GW          DI+A VR  ++      E+
Sbjct: 826  FEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKNNPKHEL 885

Query: 892  ME----------PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
            +           P+ P    F G +++    +   +Y    I E+ N  T  I ELP+R 
Sbjct: 886  LHYAIKHKITILPLRPSNYNFKGHLKRFG--QYYYSYGTYVISEQRNIIT--ITELPLRV 941

Query: 942  WTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR-------TKQEGL 992
             T  Y   +ESI   ++  +FI     YS   T++  V L   S+ R       T+++  
Sbjct: 942  PTVAY---IESIKKSSNRMTFIEEIIDYSSSETIEILVKLKPNSLNRIMEEFKCTEEQDS 998

Query: 993  LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
            ++ F        S+++    KG I +++T  +IL  +   R E Y+KR   +   L+L +
Sbjct: 999  IENFLRLRNCLHSHLNFVKPKGGIIEFNTYYEILYAWLPYRRELYQKRLMREHAVLKLRI 1058

Query: 1053 LKLENKVRFI--LGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDET 1110
            +     VR+I     +N     + ++ + +L E    GF P  +       +++      
Sbjct: 1059 IMETAIVRYINESAELNLSHYEDEKEASRILSE---HGFPPLNQT-----LIISPEFASI 1110

Query: 1111 EESEENPEVVNGVQSIDYDYLLSM-------AIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
            EE   N + + G     Y Y+LS+       A  T  +EK++ + A  DK    V+ L +
Sbjct: 1111 EEL--NQKALQGC----YTYILSLQARELLIAAKTRRVEKIKKMQARLDK----VEQLLQ 1160

Query: 1164 ATP---ESLWVKDLDALD 1178
             +P    S+W++++DA++
Sbjct: 1161 ESPFPGASVWLEEIDAVE 1178


>gi|262135|gb|AAB24598.1| type II DNA topoisomerase homolog [African swine fever virus ASFV,
            Malawi LIL20/1, Peptide, 1191 aa]
          Length = 1191

 Score =  307 bits (786), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 317/1221 (25%), Positives = 539/1221 (44%), Gaps = 200/1221 (16%)

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQ----RDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
            IHR   + P L KIFD ++VNA D+++    +  K+  +K+  D+   + +  N G G+P
Sbjct: 46   IHR--DHCPALLKIFDFLIVNATDHERACHSKTKKVTYIKISFDK--GVFACENDGPGIP 101

Query: 125  VEIHQEEG------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
            +  H++        VYVPE+   H L  +N +       GG NG G KL  + S   I+ 
Sbjct: 102  IAKHEQASLIAKRDVYVPEVASCHFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILT 161

Query: 179  TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHL-----EDD 233
            TADG   +KY Q     +     P I+  +E   +T++   P   +           + D
Sbjct: 162  TADGA--QKYVQHINQRLDIIEPPTITPSRE--MFTRIELMPVYQELGYAQPLSETEQAD 217

Query: 234  VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP--------------KSVT 279
            + A +  R    A  +GK   +  N       S      MY               K+  
Sbjct: 218  LSAWIYLRACQCAAYVGKGTTIYYNDKPCNTGSVMALAKMYTLLSAPNSTIHTTAIKADA 277

Query: 280  RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK--KN 337
            + +     +    V+    +F+ VS +NG+  +K G HV ++   +   V+    +  K+
Sbjct: 278  KPYSLHPLQVAAVVSPKFKKFEHVSIINGVNCVK-GEHVTFLKKTINEMVVKKFQQTIKD 336

Query: 338  KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKS 397
            KN      +  ++++V +   I    +  Q K+ L++ ++ F +   +   FL  +T   
Sbjct: 337  KNRKTTLRDSCSNIFVVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTNMT--R 394

Query: 398  GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAK 457
             IV+ LL        + + K D  K  DV    K   AN AGG+ ++ C ++  EGDSA 
Sbjct: 395  SIVDILL--------QSISKKDNHKQVDV---DKYTRAN-AGGKKAQDCMILAAEGDSAL 442

Query: 458  ALAMAGLSVVGR--------DRFGVFPLRGKLLNVREASSN--------------QVLNN 495
            +L  AGL+ +G+        D  G+  L G ++N  +  +N              Q+ NN
Sbjct: 443  SLVRAGLT-LGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNN 501

Query: 496  SEIGNIKKILGLKQGVEYNNVK---SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              +  I ++LGL     Y   +    LRYG ++   D                       
Sbjct: 502  KVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVD----------------------- 538

Query: 553  CFMLAQDHDGS-HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV-LSFYSM 610
                 QD DG   I GLL+ + H FWP L+ I  F+   +TP+++   K   V + FY  
Sbjct: 539  -----QDLDGCGKILGLLLAYFHLFWPQLI-IHGFVKRLLTPLIRVYEKGKTVPVEFYYE 592

Query: 611  PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---DDQDGEA 667
             +++AW +     A+  ++KYYKG+    + E K  F+    H  + V+    DD   E 
Sbjct: 593  QEFDAWAKKQTSLANH-TVKYYKGIAAHDTHEVKSMFK----HFDNMVYTFTLDDSAKEL 647

Query: 668  IELAFSKKKIEARKKWLLQ-----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
              + F  +  E RK+ L        E        ++ I  S  +  +   + +  ++R I
Sbjct: 648  FHIYFGGES-ELRKRELCTGVVPLTETQTQSIHSDRQIPCSLHLQVDTKAYKLDAIERQI 706

Query: 723  PSMVDGLKPGQRKILF----CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
            P+ +DG+   +RKIL     C    N  +E KV QF GYV++H  YHHG+ SL ++I+  
Sbjct: 707  PNFLDGMTRARRKILAGGLKCFASNN--RERKVFQFGGYVADHMFYHHGDMSLNTSIIKA 764

Query: 779  AQDFVGSNNIN-LLQPNGQFGTRNQGGKDAASARYIFTRL-SPITRFLFPKDDDKLLDYL 836
            AQ + GS+++  +    G FG+R+ GGKDA S RYI  +L S   + +FP +D  LL Y+
Sbjct: 765  AQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPYV 824

Query: 837  NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-----GEM 891
             EDGQ+ EP +Y+P++P  ++        GW          DI+A VR  ++      E+
Sbjct: 825  FEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKNNPKHEL 884

Query: 892  ME----------PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
            +           P+ P    F G +++    +   +Y    + E+ N  T  I ELP+R 
Sbjct: 885  LHYAIERKITVLPLRPSNYNFKGHLKRFG--QYYYSYGTYVVSEQRNIIT--ITELPLRV 940

Query: 942  WTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR-------TKQEGL 992
             T  Y   +ESI   ++  +FI     YS   T++  V L   S+ R       T+++  
Sbjct: 941  PTVAY---IESIKKSSNRMAFIEEIIDYSSSETIEILVKLKPNSLNRIVEEFKETEEQDS 997

Query: 993  LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
            ++ F        S+++    KG I ++++  +IL  +   R + Y+KR   +   L+L +
Sbjct: 998  IENFLRLRNCLHSHLNFVKPKGGIIEFNSYYEILYAWLPYRRDVYQKRLMRERAVLKLRI 1057

Query: 1053 LKLENKVRFI-----LGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGAT 1107
            +     VR+I     L + + E   + ++ + +L E    GF P   N   I +    + 
Sbjct: 1058 IMETAIVRYINESADLNLSHYE---DEKEASRILSE---HGFPPL--NQSLITSPEFASI 1109

Query: 1108 DETEESEENPEVVNGVQSIDYDYLLSM-------AIGTLTLEKVQGLLADRDKLNEEVDD 1160
            +E      N + + G     Y Y+LS+       A  T  +EK++ + A  DK    V+ 
Sbjct: 1110 EEL-----NQKALQGC----YTYILSLQARELLIAAKTRRVEKIKKMQARLDK----VEQ 1156

Query: 1161 LRKATP---ESLWVKDLDALD 1178
            L + +P    S+W++++DA++
Sbjct: 1157 LLQESPFPGASVWLEEIDAVE 1177


>gi|9628219|ref|NP_042805.1| topoisomerase II [African swine fever virus]
 gi|267149|sp|Q00942.1|TOP2_ASFB7 RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase II
 gi|210654|gb|AAA42735.1| topoisomerase II [African swine fever virus]
 gi|780481|gb|AAA65341.1| topoisomerase II [African swine fever virus]
 gi|162849494|emb|CAN10461.1| Topoisomerase II [African swine fever virus OURT 88/3]
 gi|1097503|prf||2113434DU topoisomerase II
          Length = 1192

 Score =  306 bits (784), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 319/1219 (26%), Positives = 535/1219 (43%), Gaps = 195/1219 (15%)

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQ----RDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
            IHR   + P L KIFDE++VNA D+++    +  K+  +K+  D+   + S  N G G+P
Sbjct: 46   IHR--DHCPALLKIFDELIVNATDHERACHSKTKKVTYIKISFDK--GVFSCENDGPGIP 101

Query: 125  VEIHQEEG------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
            +  H++        VYVPE+     L  +N +       GG NG G KL  + S   I+ 
Sbjct: 102  IAKHEQASLIAKRDVYVPEVASCFFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILT 161

Query: 179  TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHL-----EDD 233
            TADG   +KY Q     +     P I+  +E   +T++   P   +           + D
Sbjct: 162  TADGA--QKYVQQINQRLDIIEPPTITPSRE--MFTRIELMPVYQELGYAEPLSETEQAD 217

Query: 234  VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP--------------KSVT 279
            + A +  R    A  +GK   +  N       S      MY               K+  
Sbjct: 218  LSAWIYLRACQCAAYVGKGTTIYYNDKPCRTGSVMALAKMYTLLSAPNSTIHTATIKADA 277

Query: 280  RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK--KN 337
            + +     +    V+    +F+ VS +NG+  +K G HV ++   +   V+    +  K+
Sbjct: 278  KPYSLHPLQVAAVVSPKFKKFEHVSIINGVNCVK-GEHVTFLKKTINEMVIKKFQQTIKD 336

Query: 338  KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKS 397
            KN      +  ++++V +   I    +  Q K+ L++ ++ F +   +   FL  +T   
Sbjct: 337  KNRKTTLRDSCSNIFVVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTSMT--R 394

Query: 398  GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAK 457
             IV+ LL        + + K D  K  DV    K   A  AGG+ ++ C L+  EGDSA 
Sbjct: 395  SIVDILL--------QSISKKDNHKQVDV---DKYTRARNAGGKRAQDCMLLAAEGDSAL 443

Query: 458  ALAMAGLSVVGR--------DRFGVFPLRGKLLNVREASSN--------------QVLNN 495
            +L   GL+ +G+        D  G+  L G ++N  +  +N              Q+ NN
Sbjct: 444  SLLRTGLT-LGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNN 502

Query: 496  SEIGNIKKILGLKQGVEYNNVKS---LRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              +  I ++LGL     Y   +    LRYG ++   D                       
Sbjct: 503  KVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVD----------------------- 539

Query: 553  CFMLAQDHDGS-HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL--SFYS 609
                 QD DG   I GLL+ + H FWP L+ I  F+   +TP+++   K GK +   FY 
Sbjct: 540  -----QDLDGCGKILGLLLAYFHLFWPQLI-IHGFVKRLLTPLIRVYEK-GKTMPVEFYY 592

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---DDQDGE 666
              +++AW +    +  + ++KYYKGL    + E K  F+    H  + V+    DD   E
Sbjct: 593  EQEFDAWAKK-QTSLVNHTVKYYKGLAAHDTHEVKSMFK----HFDNMVYTFTLDDSAKE 647

Query: 667  AIELAFSKKKIEARKKWLLQ-----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
               + F  +  E RK+ L        E         + I  S  +  +   + +  ++R 
Sbjct: 648  LFHIYFGGES-ELRKRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQ 706

Query: 722  IPSMVDGLKPGQRKILF----CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
            IP+ +DG+   +RKIL     C    N  +E KV QF GYV++H  YHHG+ SL ++I+ 
Sbjct: 707  IPNFLDGMTRARRKILAGGVKCFASNN--RERKVFQFGGYVADHMFYHHGDMSLNTSIIK 764

Query: 778  MAQDFVGSNNIN-LLQPNGQFGTRNQGGKDAASARYIFTRL-SPITRFLFPKDDDKLLDY 835
             AQ + GS+++  +    G FG+R+ GGKDA S RYI  +L S   + +FP +D  LL Y
Sbjct: 765  AAQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPY 824

Query: 836  LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-----GE 890
            + EDGQ+ EP +Y+P++P  ++        GW          DI+A VR  ++      E
Sbjct: 825  VFEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKDNPKHE 884

Query: 891  MME----------PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIR 940
            ++           P+ P    F G +++    +   +Y    I E+ N  T  I ELP+R
Sbjct: 885  LLHYAIKHKITILPLRPSNYNFKGHLKRFG--QYYYSYGTYDISEQRNIIT--ITELPLR 940

Query: 941  RWTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR-------TKQEG 991
              T  Y   +ESI   ++  +FI     YS   T++  V L   S+ R       T+++ 
Sbjct: 941  VPTVAY---IESIKKSSNRMTFIEEIIDYSSSETIEILVKLKPNSLNRIVEEFKETEEQD 997

Query: 992  LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
             ++ F        S+++    KG I ++++  +IL  +   R E Y+KR   +   L+L 
Sbjct: 998  SIENFLRLRNCLHSHLNFVKPKGGIIEFNSYYEILYAWLPYRRELYQKRLMREHAVLKLR 1057

Query: 1052 LLKLENKVRFI--LGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDE 1109
            ++     VR+I     +N     + ++ + +L E    GF P   N   I +    + +E
Sbjct: 1058 IIMETAIVRYINESAELNLSHYEDEKEASRILSE---HGFPPL--NHTLIISPEFASIEE 1112

Query: 1110 TEESEENPEVVNGVQSIDYDYLLSM-------AIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
                  N + + G     Y Y+LS+       A  T  +EK++ + A  DK    V+ L 
Sbjct: 1113 L-----NQKALQGC----YTYILSLQARELLIAAKTRRVEKIKKMQARLDK----VEQLL 1159

Query: 1163 KATP---ESLWVKDLDALD 1178
            + +P    S+W++++DA++
Sbjct: 1160 QESPFPGASVWLEEIDAVE 1178


>gi|162849321|emb|CAN10212.1| Topoisomerase II [African swine fever virus Benin 97/1]
          Length = 1192

 Score =  306 bits (784), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 319/1219 (26%), Positives = 535/1219 (43%), Gaps = 195/1219 (15%)

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQ----RDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
            IHR   + P L KIFDE++VNA D+++    +  K+  +K+  D+   + S  N G G+P
Sbjct: 46   IHR--DHCPALLKIFDELIVNATDHERACHSKTKKVTYIKISFDK--GVFSCENDGPGIP 101

Query: 125  VEIHQEEG------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
            +  H++        VYVPE+     L  +N +       GG NG G KL  + S   I+ 
Sbjct: 102  IAKHEQASLIAKRDVYVPEVASCFFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILT 161

Query: 179  TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHL-----EDD 233
            TADG   +KY Q     +     P I+  +E   +T++   P   +           + D
Sbjct: 162  TADGA--QKYVQQINQRLDIIEPPTITPSRE--MFTRIELMPVYQELGYAEPLSETEQAD 217

Query: 234  VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP--------------KSVT 279
            + A +  R    A  +GK   +  N       S      MY               K+  
Sbjct: 218  LSAWIYLRACQCAAYVGKGTTIYYNDKPCRTGSVMALAKMYTLLSAPNSTIHTATIKADA 277

Query: 280  RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK--KN 337
            + +     +    V+    +F+ VS +NG+  +K G HV ++   +   V+    +  K+
Sbjct: 278  KPYSLHPLQVAAVVSPKFKKFEHVSIINGVNCVK-GEHVTFLKKTINEMVIKKFQQTIKD 336

Query: 338  KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKS 397
            KN      +  ++++V +   I    +  Q K+ L++ ++ F +   +   FL  +T   
Sbjct: 337  KNRKTTLRDSCSNIFVVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTSMT--R 394

Query: 398  GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAK 457
             IV+ LL        + + K D  K  DV    K   A  AGG+ ++ C L+  EGDSA 
Sbjct: 395  SIVDILL--------QSISKKDNHKQVDV---DKYTRARNAGGKRAQDCMLLAAEGDSAL 443

Query: 458  ALAMAGLSVVGR--------DRFGVFPLRGKLLNVREASSN--------------QVLNN 495
            +L   GL+ +G+        D  G+  L G ++N  +  +N              Q+ NN
Sbjct: 444  SLLRTGLT-LGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNN 502

Query: 496  SEIGNIKKILGLKQGVEYNNVKS---LRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              +  I ++LGL     Y   +    LRYG ++   D                       
Sbjct: 503  KVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVD----------------------- 539

Query: 553  CFMLAQDHDGS-HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL--SFYS 609
                 QD DG   I GLL+ + H FWP L+ I  F+   +TP+++   K GK +   FY 
Sbjct: 540  -----QDLDGCGKILGLLLAYFHLFWPQLI-IHGFVKRLLTPLIRVYEK-GKTMPVEFYY 592

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---DDQDGE 666
              +++AW +    +  + ++KYYKGL    + E K  F+    H  + V+    DD   E
Sbjct: 593  EQEFDAWAKK-QTSLVNHTVKYYKGLAAHDTHEVKSMFK----HFDNMVYTFTLDDSAKE 647

Query: 667  AIELAFSKKKIEARKKWLLQ-----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
               + F  +  E RK+ L        E         + I  S  +  +   + +  ++R 
Sbjct: 648  LFHIYFGGES-ELRKRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQ 706

Query: 722  IPSMVDGLKPGQRKILF----CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
            IP+ +DG+   +RKIL     C    N  +E KV QF GYV++H  YHHG+ SL ++I+ 
Sbjct: 707  IPNFLDGMTRARRKILAGGVKCFASNN--RERKVFQFGGYVADHMFYHHGDMSLNTSIIK 764

Query: 778  MAQDFVGSNNIN-LLQPNGQFGTRNQGGKDAASARYIFTRL-SPITRFLFPKDDDKLLDY 835
             AQ + GS+++  +    G FG+R+ GGKDA S RYI  +L S   + +FP +D  LL Y
Sbjct: 765  AAQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPY 824

Query: 836  LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-----GE 890
            + EDGQ+ EP +Y+P++P  ++        GW          DI+A VR  ++      E
Sbjct: 825  VFEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKDNPKHE 884

Query: 891  MME----------PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIR 940
            ++           P+ P    F G +++    +   +Y    I E+ N  T  I ELP+R
Sbjct: 885  LLHYAIKHKITILPLRPSNYNFKGHLKRFG--QYYYSYGTYDISEQRNIIT--ITELPLR 940

Query: 941  RWTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR-------TKQEG 991
              T  Y   +ESI   ++  +FI     YS   T++  V L   S+ R       T+++ 
Sbjct: 941  VPTVAY---IESIKKSSNRMTFIEEIIDYSSSETIEILVKLKPNSLNRIVEEFKETEEQD 997

Query: 992  LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
             ++ F        S+++    KG I ++++  +IL  +   R E Y+KR   +   L+L 
Sbjct: 998  SIENFLRLRNCLHSHLNFVKPKGGIIEFNSYYEILYAWLPYRRELYQKRLMREHAVLKLR 1057

Query: 1052 LLKLENKVRFI--LGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDE 1109
            ++     VR+I     +N     + ++ + +L E    GF P   N   I +    + +E
Sbjct: 1058 IIMETAIVRYINESAELNLSHYEDEKEASRILSE---HGFPPL--NHTLIISPEFASIEE 1112

Query: 1110 TEESEENPEVVNGVQSIDYDYLLSM-------AIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
                  N + + G     Y Y+LS+       A  T  +EK++ + A  DK    V+ L 
Sbjct: 1113 L-----NQKALQGC----YTYILSLQARELLIAAKTHRVEKIKKMQARLDK----VEQLL 1159

Query: 1163 KATP---ESLWVKDLDALD 1178
            + +P    S+W++++DA++
Sbjct: 1160 QESPFPGASVWLEEIDAVE 1178


>gi|291335074|gb|ADD94703.1| hypothetical protein [uncultured phage MedDCM-OCT-S09-C23]
          Length = 417

 Score =  304 bits (778), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 176/433 (40%), Positives = 256/433 (59%), Gaps = 26/433 (6%)

Query: 592  TPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNIT 651
            TPIV+   +  K+  FY+   ++ + +  G        KY+KGLGTS++KE  E F    
Sbjct: 3    TPIVRVF-EGKKIHVFYNEQRFKQFIQLPG--KQKLRKKYHKGLGTSSNKEVMETFGERM 59

Query: 652  LHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYI---KYSDFVNK 708
            +   ++V  DD   EA+ + FS  + + RKKWL  F+P  ++D K   I     S F+N+
Sbjct: 60   V---EYV-HDDLADEAMRMVFSSNRSDDRKKWLSDFDPDANVDIKTGSIVQMDLSQFINE 115

Query: 709  ELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFI---KEAKVAQFSGYVSEHSAYH 765
             +I FS+ D  RSIP ++DGLK  QRK+L+  FK+      K  KV Q +G+ +EH+ YH
Sbjct: 116  RMIHFSIDDCGRSIPHLLDGLKESQRKVLYAVFKKKLSYKSKTLKVNQLAGFTAEHTGYH 175

Query: 766  HGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLF 825
            HGEQ L  TI+ +A D +G NNI  L  +GQFG+R  GGKDA++ RYIFT+   +TR LF
Sbjct: 176  HGEQCLYDTIINLATDIMGKNNIPYLYRDGQFGSRLDGGKDASAGRYIFTKEDMLTRKLF 235

Query: 826  PKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSE-GIGTGWSSYIPNYNPRDIVANVR 884
               DD LL    +DG+ +EP +Y+PIIPT LVNG + GIGTGWS  +P YNP D+V++ +
Sbjct: 236  IPSDDNLLPRNTDDGEPVEPRFYVPIIPTALVNGCQAGIGTGWSCSLPLYNPLDLVSSCK 295

Query: 885  RLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQ 944
            + +  + +  + PWYRGF G I + +  +    ++ +G++E  N+ T+ I ELPI  WT 
Sbjct: 296  KWIKNQTLPELSPWYRGFKGVITRISPTK----FSTSGLMERKND-TVTITELPIGVWTN 350

Query: 945  DYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTIST 1004
             Y+ FLE ++++   FI+    YS    V F V     + M+   E L    KL  T++T
Sbjct: 351  KYKSFLEDLLEK--KFIKKLSNYSTPKEVKF-VIKEHRNGMKCTMENL----KLINTVTT 403

Query: 1005 SNMHLFDSKGVIK 1017
            SNM LF  KG +K
Sbjct: 404  SNMVLFTPKGKLK 416


>gi|355725607|gb|AES08610.1| topoisomerase II alpha 170kDa [Mustela putorius furo]
          Length = 290

 Score =  301 bits (772), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 151/253 (59%), Positives = 194/253 (76%), Gaps = 5/253 (1%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 29  SIERIYQKKTQLEHILLRPDTYIGSVELVTQHMWVYDEDI-GINYREVTFVPGLYKIFDE 87

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRDPKM  ++V ID E++LIS+ N+G G+PV  H+ E +YVP LIFG LLT
Sbjct: 88  ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +  K +KQ + NNMG+  E  + 
Sbjct: 148 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMNNMGRAGEMEL- 206

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR--VP 263
           K   G+++T ++F+PDL+KF M  L+ D+VALM +R  D+AG   K VKV LNG++  VP
Sbjct: 207 KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVP 265

Query: 264 VKSFAEYVDMYPK 276
           VK F  YVDMY K
Sbjct: 266 VKGFRSYVDMYLK 278


>gi|156394521|ref|XP_001636874.1| predicted protein [Nematostella vectensis]
 gi|156223981|gb|EDO44811.1| predicted protein [Nematostella vectensis]
          Length = 394

 Score =  298 bits (764), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 170/398 (42%), Positives = 245/398 (61%), Gaps = 17/398 (4%)

Query: 817  LSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNP 876
            LS +++ LFP  D+  L +LNED Q+IEP WY PIIPT+LVNG+EGIGTG+S+ +PNY+P
Sbjct: 2    LSTVSKMLFPPSDEPNLKFLNEDNQRIEPEWYCPIIPTILVNGAEGIGTGYSTKVPNYDP 61

Query: 877  RDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKE 936
            R I  N+R+++NGE  E M PWY+ F GTI K    +    Y+VTG IE +++TTL I E
Sbjct: 62   RAIAENIRKMMNGEEPEEMLPWYKNFIGTITKVDDTK----YSVTGNIEVIDDTTLEITE 117

Query: 937  LPIRRWTQDYRE-FLESIIDQNDSF---IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGL 992
            LPI  WTQ Y+E  LE ++   D     I  +++Y  +T V F + ++E  M   +Q GL
Sbjct: 118  LPIGTWTQSYKESVLEPMLHGTDKVPPCITDYKEYHTETRVRFVITMAENKMREAEQVGL 177

Query: 993  LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
             KKFKL  TI+TSNM LFD+ G +KKYDT  +IL+EFF +R+E Y  RK      L  E 
Sbjct: 178  HKKFKLEATINTSNMVLFDAMGCLKKYDTTREILKEFFTLRMERYIMRKAYMEGMLTAES 237

Query: 1053 LKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATD 1108
             KL ++ RFIL  + G IV+ N+ + DL+  L Q+G+   P    K+S+     V  + D
Sbjct: 238  GKLNSQARFILEKIEGTIVIENKPKRDLITMLVQRGYPSDPVKAWKDSQDTTLGVDDSDD 297

Query: 1109 ETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPES 1168
            +T  +  +    +G    D++YLL+M++ +L+ EK   LL  RD+   E++DLRK +P+ 
Sbjct: 298  DTMSTVSS--TASGAGGPDFNYLLNMSMWSLSQEKKDELLKQRDQKAAELEDLRKKSPKD 355

Query: 1169 LWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDA 1206
            LW +DLD     L EL+  +    E+ M +  + +G A
Sbjct: 356  LWNEDLDIF---LAELEAVEQIEREDEMAMGKSKSGRA 390


>gi|291289555|emb|CBH29212.1| BA71V-P1192R (i7R) [African swine fever virus E75]
          Length = 1145

 Score =  296 bits (759), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 289/1091 (26%), Positives = 478/1091 (43%), Gaps = 165/1091 (15%)

Query: 69   IHRTISYVPGLYKIFDEILVNAADNKQ----RDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
            IHR   + P L KIFDE++VNA D+++    +  K+  +K+  D+   + S  N G G+P
Sbjct: 46   IHR--DHCPALLKIFDELIVNATDHERACHSKTKKVTYIKISFDK--GVFSCENDGPGIP 101

Query: 125  VEIHQEEG------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
            +  H++        VYVPE+     L  +N +       GG NG G KL  + S   I+ 
Sbjct: 102  IAKHEQASLIAKRDVYVPEVASCFFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILT 161

Query: 179  TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHL-----EDD 233
            TADG   +KY Q     +     P I+  +E   +T++   P   +           + D
Sbjct: 162  TADGA--QKYVQQINQRLDIIEPPTITPSRE--MFTRIELMPVYQELGYAEPLSETEQAD 217

Query: 234  VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP--------------KSVT 279
            + A +  R    A  +GK   +  N       S      MY               K+  
Sbjct: 218  LSAWIYLRACQCAAYVGKGTTIYYNDKPCRTGSVMALAKMYTLLSAPNSTIHTATIKADA 277

Query: 280  RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK--KN 337
            + +     +    V+    +F+ VS +NG+  +K G HV ++   +   V+    +  K+
Sbjct: 278  KPYSLHPLQVAAVVSPKFKKFEHVSIINGVNCVK-GEHVTFLKKTINEMVIKKFQQTIKD 336

Query: 338  KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKS 397
            KN      +  ++++V +   I    +  Q K+ L++ ++ F +   +   FL  +T   
Sbjct: 337  KNRKTTLRDSCSNIFVVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTSMT--R 394

Query: 398  GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAK 457
             IV+ LL        + + K D  K  DV    K   A  AGG+ ++ C L+  EGDSA 
Sbjct: 395  SIVDILL--------QSISKKDNHKQVDV---DKYTRARNAGGKRAQDCMLLAAEGDSAL 443

Query: 458  ALAMAGLSVVGR--------DRFGVFPLRGKLLNVREASSN--------------QVLNN 495
            +L   GL+ +G+        D  G+  L G ++N  +  +N               + NN
Sbjct: 444  SLLRTGLT-LGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNXXLTNN 502

Query: 496  SEIGNIKKILGLKQGVEYNNVK---SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
              +  I ++LGL     Y   +    LRYG ++   D                       
Sbjct: 503  KVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVD----------------------- 539

Query: 553  CFMLAQDHDGS-HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL--SFYS 609
                 QD DG   I GLL+ + H FWP L+ I  F+   +TP+++   K GK +   FY 
Sbjct: 540  -----QDLDGCGKILGLLLAYFHLFWPQLI-IHGFVKRLLTPLIRVYEK-GKTMPVEFYY 592

Query: 610  MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---DDQDGE 666
              +++AW +    +  + ++KYYKGL    + E K  F+    H  + V+    DD   E
Sbjct: 593  EQEFDAWAKK-QTSLVNHTVKYYKGLAAHDTHEVKSMFK----HFDNMVYTFTLDDSAKE 647

Query: 667  AIELAFSKKKIEARKKWLLQ-----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
               + F  +  E RK+ L        E         + I  S  +  +   + +  ++R 
Sbjct: 648  LFHIYFGGES-ELRKRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQ 706

Query: 722  IPSMVDGLKPGQRKILF----CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
            IP+ +DG+   +RKIL     C    N  +E KV QF GYV++H  YHHG+ SL ++I+ 
Sbjct: 707  IPNFLDGMTRARRKILAGGVKCFASNN--RERKVFQFGGYVADHMFYHHGDMSLNTSIIK 764

Query: 778  MAQDFVGSNNIN-LLQPNGQFGTRNQGGKDAASARYIFTRL-SPITRFLFPKDDDKLLDY 835
             AQ + GS+++  +    G FG+R+ GGKDA S RYI  +L S   + +FP +D  LL Y
Sbjct: 765  AAQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPY 824

Query: 836  LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-----GE 890
            + EDGQ+ EP +Y+P++P  ++        GW          DI+A VR  ++      E
Sbjct: 825  VFEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKDNPKHE 884

Query: 891  MME----------PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIR 940
            ++           P+ P    F G +++    +   +Y    I E+ N  T  I ELP+R
Sbjct: 885  LLHYAIKHKITILPLRPSNYNFKGHLKRFG--QYYYSYGTYDISEQRNIIT--ITELPLR 940

Query: 941  RWTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR-------TKQEG 991
              T  Y   +ESI   ++  +FI     YS   T++  V L   S+ R       T+++ 
Sbjct: 941  VPTVAY---IESIKKSSNRMTFIEEIIDYSSSETIEILVKLKPNSLNRIVEEFKETEEQD 997

Query: 992  LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
             ++ F        S+++    KG I ++++  +IL  +   R E Y+KR   +   L+L 
Sbjct: 998  SIENFLRLRNCLHSHLNFVKPKGGIIEFNSYYEILYAWLPYRRELYQKRLMREHAVLKLR 1057

Query: 1052 LLKLENKVRFI 1062
            ++     VR+I
Sbjct: 1058 IIMETAIVRYI 1068


>gi|413923558|gb|AFW63490.1| hypothetical protein ZEAMMB73_491338 [Zea mays]
          Length = 512

 Score =  296 bits (758), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 217/513 (42%), Positives = 287/513 (55%), Gaps = 57/513 (11%)

Query: 989  QEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENL 1048
            +EGL+KKFKLTTTI TSNMHLFDS G I+KYDTPEQILEEF H+RLEFY KRK+  L+++
Sbjct: 6    EEGLVKKFKLTTTIGTSNMHLFDSDGKIRKYDTPEQILEEFCHLRLEFYCKRKEALLKSI 65

Query: 1049 ELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATD 1108
            +L+L KLENKVRFI  VV+ EI+VNNRKR DL LELRQK F PFPK  K  E    GA +
Sbjct: 66   KLDLKKLENKVRFIRCVVDNEIIVNNRKRADLFLELRQKNFDPFPKKKKRAEPAAVGALE 125

Query: 1109 ETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPES 1168
            E E  E       G +  DY+YLLSM+IGTLTLEK+Q L A++ KL ++V++L   +P+S
Sbjct: 126  EEENEESP--EAAGAEPSDYEYLLSMSIGTLTLEKIQELNAEKQKLVDDVEELENMSPKS 183

Query: 1169 LWVKDLDALDMQLDELDKSDARAEEERMK-IKGNGNGDAGPKIVAKRAPKNARKNDK--- 1224
            LW+KDLDA + +LD LD+ D   E +R K I     G +       R    ++K D    
Sbjct: 184  LWLKDLDAFEKELDVLDQMDLAEELQREKRINAGKKGGSKAAPKKPRKKAASKKLDSDTE 243

Query: 1225 ---------------KSNNARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEV 1269
                           K  +++A ++  E  +       K ++  KKA A     DEE ++
Sbjct: 244  DDDFEPAVAKRGAQPKKTSSKANDSASEDGDYVAAENQKKQS--KKASAHV---DEEVDM 298

Query: 1270 PDLKQRLAKLNEQLASTKLEPSPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSD 1329
            P LK RLA  N        + SPD S  METE  ++  ++ E      A K+    + S 
Sbjct: 299  PSLKDRLAAFNIS------DSSPDHSA-METEVTELTEQQNENKATEGASKRGGRKKASS 351

Query: 1330 SEDEIIID-DDEAFEIAAPEEGKKGGRKAAGNSKAAKPAA---ETKKRGPAKKQQPEASL 1385
            S   I  D D+E  E+ A ++G+  GR         KPAA           K+   +  +
Sbjct: 352  SLATIPSDVDEEVLEVQAQKKGR--GR---------KPAAVVKPKAPAAARKRAPAQGKV 400

Query: 1386 GQRLLTEMLKPAE------SSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSPSTSE 1439
             Q+ + EMLK  E      SSPEKKVRKMR+SPFNKKSGS+L R  T    SG++   S 
Sbjct: 401  TQKKIDEMLKATEDNNTSASSPEKKVRKMRSSPFNKKSGSILQRGSTASASSGTTVEASP 460

Query: 1440 EVAEVLPP--KARPQRANRRQARYV-LSDSESE 1469
                   P   A+P+R  R   + + +SDS+ E
Sbjct: 461  PSGSSAEPVGAAQPRRTARATKKPIYISDSDPE 493


>gi|326804512|ref|YP_004327383.1| DNA topoisomerase 2 [Salmonella phage Vi01]
 gi|301795162|emb|CBW37880.1| DNA topoisomerase 2 [Salmonella phage Vi01]
 gi|397133797|gb|AFO10306.1| DNA topoisomerase [Escherichia phage ECML-4]
 gi|408387314|gb|AFU64320.1| DNA topoisomerase [Salmonella phage STML-13-1]
          Length = 636

 Score =  290 bits (743), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 212/670 (31%), Positives = 339/670 (50%), Gaps = 63/670 (9%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR-TISYVPGLYKIFDE 85
           IE  Y+K + +EHILLRP+ ++GSI       WIY+     +I +    Y P L K FDE
Sbjct: 7   IERKYKKLTHIEHILLRPERHLGSIRSAVGTTWIYDPIKDQVIFKDNFEYSPALIKQFDE 66

Query: 86  ILVNAADNKQ--RDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
           I+ N+ D+ +      +  + + +   +  I V ++G G+PV  H E   ++PE++FG L
Sbjct: 67  IITNSVDHSKTPEGKSLTEITITVSPMNGQIIVADNG-GIPVVKHGETKEWLPEMLFGSL 125

Query: 144 LTSSNYDDNVK----KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
              SN++D+ +    K +GG+NG GA L N+FS  F + T DGK  K Y Q F +N+ K+
Sbjct: 126 YAGSNFNDDDEEYNNKKSGGQNGEGASLVNVFSKWFRVTTNDGK--KSYTQTFEDNLSKR 183

Query: 200 SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
           S P IS        T +++ PD A+  +  L+ + + ++ +R  ++A C    +KV LNG
Sbjct: 184 SNPVISNLNAPG--TSIAWIPDYARLGVKGLDQNNLLMIYRRAFEVAAC-NPRLKVILNG 240

Query: 260 HRVPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
            ++ +  F  +VD + +  +       E W + V  S+G F   S+VN IAT  GG HVD
Sbjct: 241 KQIRIDRFGHFVDYFCQGSSVDE---TEEWSVAVAPSQGTFIHASYVNSIATHIGGPHVD 297

Query: 320 YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
           YVA+Q+ N +   + KK K  ++K   +KNH+ +F++A I+NP FDSQTKE +T   S F
Sbjct: 298 YVADQIVNAIRPQLVKKFK-TDLKPSMIKNHMMLFISADINNPRFDSQTKERMTTPVSQF 356

Query: 380 GSKCELSEEFLKKVT--AKSGIVETLLSWANFKQSKDLK--KNDGTKTEDVRGISKLEDA 435
           G+  + S++ ++K      +G+ + L +  N +   + +  K D +K  D R I K   A
Sbjct: 357 GTTYKPSDKLIRKALEFVTAGLSKELAALRNDQDDAEFEKAKKDISK-RDYREIEKYYPA 415

Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
              G R+   C+L+LTEGDSA   +   L+     + G+FPLRGK +N      ++V+NN
Sbjct: 416 TARGDRSG--CSLLLTEGDSA---SNPILNARDTKKIGLFPLRGKFINCLNNPRSKVMNN 470

Query: 496 SEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFM 555
            E  N+  I G    V    +   RY   ++ TD                          
Sbjct: 471 EEFKNLCTIHG--GAVPGQPIDITRYPQTVVATD-------------------------- 502

Query: 556 LAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL-SFYSMPDYE 614
              D DG HI+GLLI    ++WP  ++    L    TP ++     GK +  F S  +YE
Sbjct: 503 --ADDDGIHIRGLLITLYCTYWPEYVR-QGRLKLLRTPYMRIW--CGKTMYEFMSNTEYE 557

Query: 615 AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
            + ++      +   KY KGLG +++++ K    N+  +    V  DD   E+++  F  
Sbjct: 558 EFLKTPDAKKIT-KKKYLKGLGGNSTEDFKRILNNLDAYTTT-VTLDDNYKESLKNGFGD 615

Query: 675 KKIEARKKWL 684
           +  + RK W 
Sbjct: 616 EAADYRKTWF 625


>gi|431809358|ref|YP_007236254.1| DNA topoisomerase [Salmonella phage SKML-39]
 gi|408387497|gb|AFU64502.1| DNA topoisomerase [Salmonella phage SKML-39]
          Length = 637

 Score =  287 bits (735), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 216/674 (32%), Positives = 339/674 (50%), Gaps = 70/674 (10%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR-TISYVPGLYKIFDE 85
           IE  Y+K + +EHILLRP+ ++GSI      +W+Y+     +I R    Y P L K FDE
Sbjct: 7   IERKYKKLTHVEHILLRPERHLGSIRSSVGTVWVYDPTKDQVIFRDNFEYSPALIKQFDE 66

Query: 86  ILVNAADNKQ--RDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
           I+ N  D+ +      +  + V +   +  I V ++G G+PV  H     ++PE++FG L
Sbjct: 67  IITNCVDHSKTPEGKSLTEITVTVSPMNGQIIVADNG-GIPVVKHGVTNEWLPEMLFGSL 125

Query: 144 LTSSNYDDNVK----KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
              SN++D  +    + +GG+NG GA L N+FS  F + T+DGK  K Y Q+F +NM KK
Sbjct: 126 YAGSNFNDEDEEYNNQKSGGQNGEGASLVNVFSKWFRVATSDGK--KSYAQLFEDNMSKK 183

Query: 200 SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
           S P IS   + +  T +++ PD A+  +  L+ + + ++ +R  ++A C    +KV LNG
Sbjct: 184 SNPVISNTPK-EFGTTIAWIPDYARLGVKGLDQNNLLMIYRRAFEVAAC-NPRLKVVLNG 241

Query: 260 HRVPVKSFAEYVDMYPKSVTRFH--ERVNE--RWEICVTLSEGQFQQVSFVNGIATIKGG 315
            ++ +  F  +VD        FH    V+E   W + V  S G F   S+VN IAT  GG
Sbjct: 242 KQIRIDRFGHFVDY-------FHAGSAVDESGEWSVAVAPSSGTFMHASYVNSIATHIGG 294

Query: 316 THVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYVA+Q+   +   + KK K   +K   +KNH+ +F+ A I+NP FDSQTKE +T  
Sbjct: 295 PHVDYVADQIVAAIRPQLVKKFK-TELKPAMIKNHMSLFIAADINNPRFDSQTKERMTTP 353

Query: 376 QSSFGSKCELSEEFLKKVT--AKSGIVETLLSWANFKQSKDLK--KNDGTKTEDVRGISK 431
            S FG+  + S++ ++K      +G+ + L S  N +   + +  K D +K  D R I K
Sbjct: 354 VSQFGTSYKPSDKLIRKALEFVTAGLSKELASLRNEQDDAEFEKAKKDISK-RDYREIEK 412

Query: 432 LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
              A   G R+   C+L+LTEGDSA   +   L+     + G+FPLRGK +N   A   +
Sbjct: 413 YYPATARGDRSG--CSLLLTEGDSA---SNPILNARDTKKIGLFPLRGKFINCLNAPRTK 467

Query: 492 VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
           V+NN E  N+  I G    V    +   RY   ++ TD                      
Sbjct: 468 VMNNEEFKNLCTIHG--GAVPGQPLDISRYPQTVVATD---------------------- 503

Query: 552 FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS-FYSM 610
                  D DG HI+GLLI    ++WP  ++    L    TP ++     GKV+  F + 
Sbjct: 504 ------ADDDGIHIRGLLITLYCTYWPEYVR-QGRLKLLRTPYMRVW--CGKVMHEFMNN 554

Query: 611 PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            +YE + ++      +   KY KGLG +++++ K    N+  +    V  DD   ++++ 
Sbjct: 555 AEYEEFLKTPDAKKIT-KKKYLKGLGGNSTEDFKRILNNLDAYTTT-VTLDDGYQQSLKN 612

Query: 671 AFSKKKIEARKKWL 684
            F  +  + RK W 
Sbjct: 613 GFGDEAADYRKTWF 626


>gi|282599187|ref|YP_003358499.1| topoisomerase II large subunit [Shigella phage phiSboM-AG3]
 gi|226973493|gb|ACO94246.1| topoisomerase II large subunit [Shigella phage phiSboM-AG3]
          Length = 637

 Score =  286 bits (733), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 214/673 (31%), Positives = 336/673 (49%), Gaps = 68/673 (10%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR-TISYVPGLYKIFDE 85
           IE  Y+K + +EHILLRP+ ++GSI      +W+Y+     +I R    Y P L K FDE
Sbjct: 7   IERKYKKLTHVEHILLRPERHLGSIRSSVGTVWVYDPTKDQVIFRDNFEYSPALIKQFDE 66

Query: 86  ILVNAADNKQ--RDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
           I+ N  D+ +      +  + V +   +  I V ++G G+PV  H     ++PE++FG L
Sbjct: 67  IITNCVDHSKTPEGKSLTEITVTVSPMNGQIIVADNG-GIPVVKHGVTNEWLPEMLFGSL 125

Query: 144 LTSSNYDDNVK----KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
              SN++D  +    + +GG+NG GA L N+FS  F + T+DGK  K Y Q+F +NM KK
Sbjct: 126 YAGSNFNDEDEEYNNQKSGGQNGEGASLVNVFSKWFRVATSDGK--KSYAQLFEDNMSKK 183

Query: 200 SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
           S P IS   + +  T +++ PD A+  +  L+ + + ++ +R  ++A C    +KV LNG
Sbjct: 184 SNPVISNTPK-EFGTTIAWIPDYARLGVKGLDQNNLLMIYRRAFEVAAC-NPRLKVVLNG 241

Query: 260 HRVPVKSFAEYVDMYPKSVTRFH--ERVNE--RWEICVTLSEGQFQQVSFVNGIATIKGG 315
            ++ +  F  +VD        FH    V+E   W + V  S G F   S+VN IAT  GG
Sbjct: 242 KQIRIDRFGHFVDY-------FHAGSAVDESGEWSVAVAPSSGTFMHASYVNSIATHIGG 294

Query: 316 THVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
            HVDYVA+Q+   +   + KK K   +K   +KNH+ +F+ A I+NP FDSQTKE +T  
Sbjct: 295 PHVDYVADQIVAAIRPQLVKKFK-TELKPAVIKNHMSLFIAADINNPRFDSQTKERMTTP 353

Query: 376 QSSFGSKCELSEEFLKKVT--AKSGIVETLLSWANFKQSKDLKK-NDGTKTEDVRGISKL 432
            S FG+  + S++ ++K      +G+ + L S  N +   + +K        D R I K 
Sbjct: 354 VSQFGTSYKPSDKLIRKALEFVMAGLSKELASLRNEQDDAEFEKAKKDISKRDYREIEKY 413

Query: 433 EDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQV 492
             A   G R+   C+L+LTEGDSA   +   L+     + G+FPLRGK +N   A   +V
Sbjct: 414 YPATARGDRSG--CSLLLTEGDSA---SNPILNARDTKKIGLFPLRGKFINCLNAPRTKV 468

Query: 493 LNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
           +NN E  N+  I G    V    +   RY   ++ TD                       
Sbjct: 469 MNNEEFKNLCTIHG--GAVPGQPLDISRYPQTVVATD----------------------- 503

Query: 553 CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS-FYSMP 611
                 D DG HI+GLLI    ++WP  ++    L    TP ++     GKV+  F +  
Sbjct: 504 -----ADDDGIHIRGLLITLYCTYWPEYVR-QGRLKLLRTPYMRVW--CGKVMHEFMNNA 555

Query: 612 DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
           +YE + ++      +   KY KGLG +++++ K    N+  +    V  DD   ++++  
Sbjct: 556 EYEEFLKTPDAKKIT-KKKYLKGLGGNSTEDFKRILNNLDAYTTT-VTLDDGYQQSLKNG 613

Query: 672 FSKKKIEARKKWL 684
           F  +  + RK W 
Sbjct: 614 FGDEAADYRKTWF 626


>gi|372199379|ref|YP_004957715.1| orf014 gene product [Escherichia phage vB_EcoM_CBA120]
 gi|344055551|gb|AEM91747.1| topoisomerase II large subunit [Escherichia phage vB_EcoM_CBA120]
          Length = 637

 Score =  286 bits (732), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 213/679 (31%), Positives = 332/679 (48%), Gaps = 80/679 (11%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR-TISYVPGLYKIFDE 85
           IE  Y+K + +EHILLRP+ ++GSI      +W+Y+     +I R    Y P L K FDE
Sbjct: 7   IERKYKKLTHIEHILLRPERHLGSIRSSVGTVWVYDPTKDKVIFRDNFEYSPALIKQFDE 66

Query: 86  ILVNAADNKQRD--PKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
           I+ N  D+ +      +  + V +   +  I V ++G G+PV  H     ++PE++FG L
Sbjct: 67  IITNCVDHSKTSEGKGLTEITVTVSPMNGQIIVSDNG-GIPVVKHGVTNEWLPEMLFGSL 125

Query: 144 LTSSNYDDNVK----KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
              SN++D  +    + +GG+NG GA L N+FS  F + T+DGK  K Y Q+F +NM KK
Sbjct: 126 YAGSNFNDEDEEYNNQKSGGQNGEGASLVNVFSKWFRVATSDGK--KSYTQLFEDNMSKK 183

Query: 200 SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
           S P I    + +  T +++ PD A+  +  L+ + + ++ +R  ++A C    +KV LNG
Sbjct: 184 SNPVIGNTPK-EFGTTIAWIPDYARLGVKGLDQNNLLMIYRRAFEVAAC-NPRLKVVLNG 241

Query: 260 HRVPVKSFAEYVDMYPKSVTRFHERVNER--WEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++ +  F  +VD +          V+E   W + +T S G F   S+VN IAT  GG H
Sbjct: 242 KQIRIDRFGHFVDYFYAG-----SAVDETDDWSVAITPSSGAFMHASYVNSIATHIGGPH 296

Query: 318 VDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQS 377
           VDYVA+Q+   +   + KK K   +K   +KNH+ +F+ A I+NP FDSQTKE +T   S
Sbjct: 297 VDYVADQIVAAIRPQLVKKFK-TELKPAMIKNHMSLFIAADINNPRFDSQTKERMTTPVS 355

Query: 378 SFGSKCELSEEFLKKVT--AKSGIVETLLSWANFKQSKDLK--KNDGTKTEDVRGISKLE 433
            FG+  + SE  ++K      +G+ + L S  N ++  + +  K D +K  D R I K  
Sbjct: 356 QFGTTYKPSERLIRKALEFVTAGLSKELASLRNEQEDAEFEKAKKDISK-RDYREIEKYY 414

Query: 434 DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            A   G R+   C+L+LTEGDSA   +   L+     + G+FPLRGK +N   A  ++V+
Sbjct: 415 PATARGDRSG--CSLLLTEGDSA---SNPILNARDTKKIGLFPLRGKFINCLNAPRSKVM 469

Query: 494 NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            N E  N+  I G    V    +   RY   ++ TD                        
Sbjct: 470 ANEEFKNLCTIHG--GAVPGQPLDISRYPQTVVATD------------------------ 503

Query: 554 FMLAQDHDGSHIKGLLINFIHSFWPS--------LLKIPSFLVEFITPIVKATNKNGKVL 605
                D DG HI+GLLI    +FWP         LL+ P ++  +   I+     N +  
Sbjct: 504 ----ADDDGIHIRGLLITLYCTFWPEYVRQGRLKLLRTP-YMRVWCGNIMHEFMNNAEYE 558

Query: 606 SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG 665
            F   PD                 KY KGLG +++++ K    N+  +    V  DD   
Sbjct: 559 EFLKTPD----------AKKITKKKYLKGLGGNSTEDFKRILNNLDAYTTT-VTLDDGYK 607

Query: 666 EAIELAFSKKKIEARKKWL 684
           ++++  F  +  + RK W 
Sbjct: 608 QSLKNGFGDEAADYRKTWF 626


>gi|418488643|ref|YP_007002652.1| topoisomerase II large subunit [Escherichia phage PhaxI]
 gi|363453832|gb|AEW24240.1| topoisomerase II large subunit [Escherichia phage PhaxI]
          Length = 637

 Score =  285 bits (729), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 212/679 (31%), Positives = 334/679 (49%), Gaps = 80/679 (11%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR-TISYVPGLYKIFDE 85
           IE  Y+K + +EHILLRP+ ++GSI      +W+Y+     +I R    Y P L K FDE
Sbjct: 7   IERKYKKLTHIEHILLRPERHLGSIRSSVGTVWVYDPTKDKVIFRDNFEYSPALIKQFDE 66

Query: 86  ILVNAADNKQRD--PKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
           I+ N  D+ +      +  + V +   +  I V ++G G+PV  H     ++PE++FG L
Sbjct: 67  IITNCVDHSKTSEGKGLTEITVTVSPMNGQIIVSDNG-GIPVVKHGVTNEWLPEMLFGSL 125

Query: 144 LTSSNYDDNVK----KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
              SN++D  +    + +GG+NG GA L N+FS  F + T+DGK  K Y Q+F +NM KK
Sbjct: 126 YAGSNFNDEDEEYNNQKSGGQNGEGASLVNVFSKWFRVATSDGK--KSYTQLFEDNMSKK 183

Query: 200 SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
           S P I    + +  T +++ PD A+  +  L+ + + ++ +R  ++A C    +KV LNG
Sbjct: 184 SNPVIGNTPK-EFGTTIAWIPDYARLGVKGLDQNNLLMIYRRAFEVAAC-NPRLKVVLNG 241

Query: 260 HRVPVKSFAEYVDMYPKSVTRFHERVNER--WEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++ +  F  +VD +          V+E   W + +T S G F   S+VN IAT  GG H
Sbjct: 242 KQIRIDRFGHFVDYFYAG-----SAVDETDDWSVAITPSSGAFMHASYVNSIATHIGGPH 296

Query: 318 VDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQS 377
           VDYVA+Q+   +   + KK K   +K   +KNH+ +F+ A I+NP FDSQTKE +T   S
Sbjct: 297 VDYVADQIVAAIRPQLVKKFK-TELKPAMIKNHMSLFIAADINNPRFDSQTKERMTTPVS 355

Query: 378 SFGSKCELSEEFLKKVT--AKSGIVETLLSWANFKQSKDLK--KNDGTKTEDVRGISKLE 433
            FG+  + S++ ++K      +G+ + L S  N +++ + +  K D +K  D R I K  
Sbjct: 356 QFGTSYKPSDKLIRKALEFVTAGLSKELASLRNEQENAEFEKAKKDISK-RDYREIEKYY 414

Query: 434 DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            A   G R+   C+L+LTEGDSA   +   L+     + G+FPLRGK +N   A  ++V+
Sbjct: 415 PATARGDRSG--CSLLLTEGDSA---SNPILNARDTKKIGLFPLRGKFINCLNAPRSKVM 469

Query: 494 NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            N E  N+  I G    V    +   RY   ++ TD                        
Sbjct: 470 ANEEFKNLCTIHG--GAVPGQPLDISRYPQTVVATD------------------------ 503

Query: 554 FMLAQDHDGSHIKGLLINFIHSFWPS--------LLKIPSFLVEFITPIVKATNKNGKVL 605
                D DG HI+GLLI    +FWP         LL+ P ++  +   I+     N +  
Sbjct: 504 ----ADDDGIHIRGLLITLYCTFWPEYVRQGRLKLLRTP-YMRVWCGNIMHEFMNNAEYE 558

Query: 606 SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG 665
            F   PD                 KY KGLG +++++ K    N+  +    V  DD   
Sbjct: 559 EFLKTPD----------AKKITKKKYLKGLGGNSTEDFKRILNNLDAYTTT-VTLDDGYK 607

Query: 666 EAIELAFSKKKIEARKKWL 684
           ++++  F  +  + RK W 
Sbjct: 608 QSLKNGFGDEAADYRKTWF 626


>gi|422937788|ref|YP_007007990.1| DNA topoisomerase II [Salmonella phage PhiSH19]
 gi|355398384|gb|AER70142.1| DNA topoisomerase II [Salmonella phage PhiSH19]
          Length = 637

 Score =  285 bits (729), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 212/679 (31%), Positives = 333/679 (49%), Gaps = 80/679 (11%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR-TISYVPGLYKIFDE 85
           IE  Y+K + +EHILLRP+ ++GSI      +W+Y+     +I R    Y P L K FDE
Sbjct: 7   IERKYKKLTHIEHILLRPERHLGSIRSSVGTVWVYDPTKDKVIFRDNFEYSPALIKQFDE 66

Query: 86  ILVNAADNKQ--RDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
           I+ N  D+ +      +  + V +   +  I V ++G G+PV  H     ++PE++FG L
Sbjct: 67  IITNCVDHSKTPEGKGLTEITVTVSPMNGQIIVSDNG-GIPVVKHGVTNEWLPEMLFGSL 125

Query: 144 LTSSNYDDNVK----KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
              SN++D  +    + +GG+NG GA L N+FS  F + T+DGK  K Y Q+F +NM KK
Sbjct: 126 YAGSNFNDEDEEYNNQKSGGQNGEGASLVNVFSKWFRVATSDGK--KSYTQLFEDNMSKK 183

Query: 200 SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
           S P I    + +  T +++ PD A+  +  L+ + + ++ +R  ++A C    +KV LNG
Sbjct: 184 SNPVIGNTPK-EFGTTIAWIPDYARLGVKGLDQNNLLMIYRRAFEVAAC-NPRLKVVLNG 241

Query: 260 HRVPVKSFAEYVDMYPKSVTRFHERVNER--WEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++ +  F  +VD +          V+E   W + +T S G F   S+VN IAT  GG H
Sbjct: 242 KQIRIDRFGHFVDYFYAG-----SAVDETDDWSVAITPSSGAFMHASYVNSIATHIGGPH 296

Query: 318 VDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQS 377
           VDYVA+Q+   +   + KK K   +K   +KNH+ +F+ A I+NP FDSQTKE +T   S
Sbjct: 297 VDYVADQIVAAIRPQLVKKFK-TELKPAMIKNHMSLFIAADINNPRFDSQTKERMTTPVS 355

Query: 378 SFGSKCELSEEFLKKVT--AKSGIVETLLSWANFKQSKDLK--KNDGTKTEDVRGISKLE 433
            FG+  + S++ ++K      +G+ + L S  N ++  + +  K D +K  D R I K  
Sbjct: 356 QFGTSYKPSDKLIRKALEFVTAGLSKELASLRNEQEDAEFEKAKKDISK-RDYREIEKYY 414

Query: 434 DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            A   G R+   C+L+LTEGDSA   +   L+     + G+FPLRGK +N   A  ++V+
Sbjct: 415 PATARGDRSG--CSLLLTEGDSA---SNPILNARDTKKIGLFPLRGKFINCLNAPRSKVM 469

Query: 494 NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            N E  N+  I G    V    +   RY   ++ TD                        
Sbjct: 470 ANEEFKNLCTIHG--GAVPGQPLDISRYPQTVVATD------------------------ 503

Query: 554 FMLAQDHDGSHIKGLLINFIHSFWPS--------LLKIPSFLVEFITPIVKATNKNGKVL 605
                D DG HI+GLLI    +FWP         LL+ P ++  +   I+     N +  
Sbjct: 504 ----ADDDGIHIRGLLITLYCTFWPEYVRQGRLKLLRTP-YMRVWCGNIMHEFMNNAEYE 558

Query: 606 SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG 665
            F   PD                 KY KGLG +++++ K    N+  +    V  DD   
Sbjct: 559 EFLKTPD----------AKKITKKKYLKGLGGNSTEDFKRILNNLDAYTTT-VTLDDGYK 607

Query: 666 EAIELAFSKKKIEARKKWL 684
           ++++  F  +  + RK W 
Sbjct: 608 QSLKNGFGDEAADYRKTWF 626


>gi|351518454|ref|YP_004895182.1| unnamed protein product [Salmonella phage SFP10]
 gi|345451042|gb|AEN94106.1| DNA topoisomerase II large subunit [Salmonella phage SFP10]
          Length = 637

 Score =  285 bits (728), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 212/679 (31%), Positives = 333/679 (49%), Gaps = 80/679 (11%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR-TISYVPGLYKIFDE 85
           IE  Y+K + +EHILLRP+ ++GSI      +W+Y+     +I R    Y P L K FDE
Sbjct: 7   IERKYKKLTHIEHILLRPERHLGSIRSSVGTVWVYDPTKDKVIFRDNFEYSPALIKQFDE 66

Query: 86  ILVNAADNKQ--RDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
           I+ N  D+ +      +  + V +   +  I V ++G G+PV  H     ++PE++FG L
Sbjct: 67  IITNCVDHSKTPEGKGLTEITVTVSPMNGQIIVSDNG-GIPVVKHGVTNEWLPEMLFGSL 125

Query: 144 LTSSNYDDNVK----KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
              SN++D  +    + +GG+NG GA L N+FS  F + T+DGK  K Y Q+F +NM KK
Sbjct: 126 YAGSNFNDEDEEYNNQKSGGQNGEGASLVNVFSKWFRVATSDGK--KSYTQLFEDNMSKK 183

Query: 200 SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
           S P I    + +  T +++ PD A+  +  L+ + + ++ +R  ++A C    +KV LNG
Sbjct: 184 SNPVIGNTPK-EFGTTIAWIPDYARLGVKGLDQNNLLMIYRRAFEVAAC-NPRLKVVLNG 241

Query: 260 HRVPVKSFAEYVDMYPKSVTRFHERVNER--WEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++ +  F  +VD +          V+E   W + +T S G F   S+VN IAT  GG H
Sbjct: 242 KQIRIDRFGHFVDYFYAG-----SAVDETDDWSVAITPSSGVFMHASYVNSIATHIGGPH 296

Query: 318 VDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQS 377
           VDYVA+Q+   +   + KK K   +K   +KNH+ +F+ A I+NP FDSQTKE +T   S
Sbjct: 297 VDYVADQIVAAIRPQLVKKFK-TELKPAMIKNHMSLFIAADINNPRFDSQTKERMTTPVS 355

Query: 378 SFGSKCELSEEFLKKVT--AKSGIVETLLSWANFKQSKDLK--KNDGTKTEDVRGISKLE 433
            FG+  + S++ ++K      +G+ + L S  N ++  + +  K D +K  D R I K  
Sbjct: 356 QFGTSYKPSDKLIRKALEFVTAGLSKELASLRNEQEDAEFEKAKKDISK-RDYREIEKYY 414

Query: 434 DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            A   G R+   C+L+LTEGDSA   +   L+     + G+FPLRGK +N   A  ++V+
Sbjct: 415 PATARGDRSG--CSLLLTEGDSA---SNPILNARDTKKIGLFPLRGKFINCLNAPRSKVM 469

Query: 494 NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            N E  N+  I G    V    +   RY   ++ TD                        
Sbjct: 470 ANEEFKNLCTIHG--GAVPGQPLDISRYPQTVVATD------------------------ 503

Query: 554 FMLAQDHDGSHIKGLLINFIHSFWPS--------LLKIPSFLVEFITPIVKATNKNGKVL 605
                D DG HI+GLLI    +FWP         LL+ P ++  +   I+     N +  
Sbjct: 504 ----ADDDGIHIRGLLITLYCTFWPEYVRQGRLKLLRTP-YMRVWCGNIMHEFMNNAEYE 558

Query: 606 SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG 665
            F   PD                 KY KGLG +++++ K    N+  +    V  DD   
Sbjct: 559 EFLKTPD----------AKKITKKKYLKGLGGNSTEDFKRILNNLDAYTTT-VTLDDGYK 607

Query: 666 EAIELAFSKKKIEARKKWL 684
           ++++  F  +  + RK W 
Sbjct: 608 QSLKNGFGDEAADYRKTWF 626


>gi|440789459|ref|YP_007349169.1| DNA topoisomerase II large subunit [Serratia phage phiMAM1]
 gi|425702498|gb|AFX93658.1| DNA topoisomerase II large subunit [Serratia phage phiMAM1]
          Length = 633

 Score =  285 bits (728), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 203/672 (30%), Positives = 334/672 (49%), Gaps = 77/672 (11%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEE-ESKTMIHRTISYVPGLYKIFDEILVN 89
           Y++   ++HILLRP+ ++GSI       W+Y+  + + ++ +   Y P L K FDEI+ N
Sbjct: 10  YKRLDHIQHILLRPERHLGSIRSAKLDTWVYDPLKDQVVLKKDFEYSPALVKQFDEIITN 69

Query: 90  AADNKQ--RDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
             D+ +      +  + V I   +  I V ++G G+PV  H + G ++PE++FG L + S
Sbjct: 70  CVDHSKTPEGKHLTDITVTITPMNGQIIVADNG-GIPVVRHPDNGEWIPEMLFGSLYSGS 128

Query: 148 NYDDN----VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
           N++D+      K  GG+NG GA L N+FS  F + T DGK  K + Q FT+NM  +  P 
Sbjct: 129 NFNDDDPEFNNKNGGGQNGEGASLVNVFSKWFRVVTNDGK--KTFSQTFTDNMSGREPPT 186

Query: 204 ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
           IS        T +++ PD  +  +  L+ + + ++ +R  ++A C  K +KV LNG  + 
Sbjct: 187 ISSISS--RGTSIAWMPDYKRLGLERLDQNNIMMLYRRAFEVAACNPK-LKVVLNGKPIR 243

Query: 264 VKSFAEYVDMY--PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
           +  F  +VD +  P +V       N  W + +T S G F   S+VN + T+ GG HVDYV
Sbjct: 244 IDRFGHFVDYFCSPATVDE-----NPEWMVGITPSSGTFAHYSYVNSVPTLVGGPHVDYV 298

Query: 322 ANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS 381
           A+Q+   +   + KK K A +K   +KNH+ ++++A I+NP FDSQTKE +T   S FG+
Sbjct: 299 ADQIVAAIRPGLEKKLK-AELKPAMIKNHMCLYISATINNPRFDSQTKERMTTPVSQFGT 357

Query: 382 KCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTE---DVRGISKLEDANL- 437
             + S+  + K  A        + +   K      +N+  + E    ++ ++KL+   + 
Sbjct: 358 TYKPSQRLINKAAA--------IVFDALKLELSALRNEAIEAELEKTIKDVNKLDTREIK 409

Query: 438 ----AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
               A  R+  Q  L+LTEGDSA    +A  S       G+FPLRGK +NV   S +++ 
Sbjct: 410 KYYPATVRDRSQAVLVLTEGDSASTPVLAARS----KNVGLFPLRGKFINVLNNSRSKLF 465

Query: 494 NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            N E  N+  ILG+  G +  N+  L Y  + + TD                        
Sbjct: 466 ANEEFKNLCAILGITPG-QKPNLDKLNYRFVCVSTD------------------------ 500

Query: 554 FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS-FYSMPD 612
                D DG HI+GL+I    ++WP  ++    LV   TP ++     GK +  F +  D
Sbjct: 501 ----ADDDGKHIRGLIILLFCTYWPEFVE-AGRLVILRTPYMRCW--VGKAMHEFMTQAD 553

Query: 613 YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
           Y+ +      +      KY KGLG +++++ + +  N++++  D +  DD    A+   F
Sbjct: 554 YDEFYAE--NHHKITKKKYLKGLGGNSTEDFRRFLDNLSIY-TDVITLDDDFKAALGTGF 610

Query: 673 SKKKIEARKKWL 684
              K + RK W 
Sbjct: 611 DTDKSDERKAWF 622


>gi|448259958|ref|YP_007237335.1| putative DNA topoisomerase II gp39 [Dickeya phage
           vB_DsoM_LIMEstone1]
 gi|384228610|emb|CCD57574.1| putative DNA topoisomerase II gp39 [Dickeya phage
           vB_DsoM_LIMEstone1]
          Length = 632

 Score =  283 bits (724), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 213/672 (31%), Positives = 337/672 (50%), Gaps = 68/672 (10%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYE-EESKTMIHRTISYVPGLYKIFDE 85
           +   Y+K S +EHILLRP+ ++GSI       W+Y+  + K +      Y P L K FDE
Sbjct: 4   VNRKYKKLSHIEHILLRPERHLGSIRSSVGMAWVYDLSKDKVVFKDNFEYNPALIKQFDE 63

Query: 86  ILVNAADNKQ--RDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
           I+ N  D+ +      +  + V +   +  I V ++G G+PV  H E G+++PE++F  L
Sbjct: 64  IITNCVDHSKTPEGKSLTEITVTVSPMNGQIIVADNG-GIPVVKH-ESGMWLPEMLFSEL 121

Query: 144 LTSSNYDDNVK----KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK 199
              SN++D+ +    + +GG+NG GA L N+FS  F + T DGK  K Y Q F +NM KK
Sbjct: 122 FAGSNFNDDDEEYNNQKSGGQNGEGASLVNVFSKWFRVTTNDGK--KSYAQTFEDNMSKK 179

Query: 200 SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
           S P IS        T +++ PD A+  +  L+ + + ++ +R  ++A C    +KV LNG
Sbjct: 180 SNPVISNMNSPG--TSIAWIPDYARLGVKGLDQNNLLMIYRRAFEVAAC-NPRLKVVLNG 236

Query: 260 HRVPVKSFAEYVDMYPKSVTRFHERVNER--WEICVTLSEGQFQQVSFVNGIATIKGGTH 317
            ++ +  F  +VD +          V+E   W + V  S G F   S+VN IAT  GG H
Sbjct: 237 KQIRIDRFGHFVDYFYAG-----SAVDEAGDWSVAVAPSSGTFMHASYVNSIATHIGGPH 291

Query: 318 VDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQS 377
           VDYVA+Q+   +   + KK K   +K   +KNH+ +F++A I+NP FDSQTKE +T   S
Sbjct: 292 VDYVADQIVAAIRPQLVKKFK-TELKPAMIKNHMSLFISADINNPRFDSQTKERMTTPVS 350

Query: 378 SFGSKCELSEEFLKKVT--AKSGIVETLLSWANFKQSKDLK--KNDGTKTEDVRGISKLE 433
            FG+  + S++ ++K      +G+ + L +  N +   + +  K D +K  D R I K  
Sbjct: 351 QFGTSYKPSDKLIRKALEFVTAGLSKELAALRNDQDDAEFEKAKKDISK-RDYREIEKYY 409

Query: 434 DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
            A   G R+   C+L+LTEGDSA   +   L+     + G+FPLRGK +N   A  ++V+
Sbjct: 410 PATARGDRSG--CSLLLTEGDSA---SNPILNARDTKKIGLFPLRGKFINCLNAPRSKVM 464

Query: 494 NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            N E  N+  I G    V    +   RY   ++ TD                        
Sbjct: 465 ANEEFKNLCTIHG--GAVPGQPLDISRYPQTVVATD------------------------ 498

Query: 554 FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS-FYSMPD 612
                D DG HI+GLLI    +FWP  ++    L    TP ++     GKV+  F +  +
Sbjct: 499 ----ADDDGIHIRGLLITLYCTFWPEYVR-QGRLKLLRTPYMRVW--CGKVMHEFMNNAE 551

Query: 613 YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
           YE + ++      +   KY KGLG +++++ K    N+  +    V  DD   ++++  F
Sbjct: 552 YEEFLKTPDAKKVT-KKKYLKGLGGNSTEDFKRILNNLDAYTAT-VTLDDGYQQSLKNGF 609

Query: 673 SKKKIEARKKWL 684
           S +  + RK W 
Sbjct: 610 SDEAADYRKTWF 621


>gi|282599154|ref|YP_003359071.1| gp60plus39 DNA topoisomerase subunit [Deftia phage phiW-14]
 gi|257219224|gb|ACV50239.1| gp60plus39 DNA topoisomerase subunit [Deftia phage phiW-14]
          Length = 648

 Score =  282 bits (721), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 203/667 (30%), Positives = 335/667 (50%), Gaps = 64/667 (9%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKH-TQALWIYEEESKTMIHRTISYVPGLYKIFDEILVN 89
           Y+  S+ +HI +RP  Y+G I     +  W   E+ +    R +   P   K+FDEI+ N
Sbjct: 28  YKMLSERDHIRIRPGRYLGDINTSLVKDSWTVNEQGQVE-RRDVQQNPAFTKLFDEIITN 86

Query: 90  AAD-NKQRDPK-MDAVKVVIDQEHDLISVHNSGDGVPV--EIHQEEG----VYVPELIFG 141
           +AD +   D K ++ ++V   +EH  ISV+++G G+PV   I   EG    +++P++IFG
Sbjct: 87  SADFSLTADGKHLNIIRVDYSREHGCISVYDNG-GIPVVETIVDREGQPTKLWIPDMIFG 145

Query: 142 HLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            L + SN++D     + G+NG G+ L N+FS+ F +ET DGK   K+   + + M  K+ 
Sbjct: 146 FLRSGSNFNDEADSESAGQNGEGSTLVNVFSSRFDVETCDGK--NKFSITYLDGMANKTA 203

Query: 202 PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
           P +   +    +T++++ P+ +   MT  ED +   +++R +++A C    ++V  NG  
Sbjct: 204 PEVVAAQGATPFTRITYFPEWSIMGMTGQEDWIEDTLRRRCLEVAAC-NTHIRVYYNGKP 262

Query: 262 VPVKSFAEYVDMY-PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDY 320
           V VK F ++  M  P  V+        +W++ ++LS+  F+  S+VN   T  GGTH+++
Sbjct: 263 VNVKKFGDFAAMLDPVCVS----ESAPKWDVALSLSKNGFKHYSYVNSTLTFVGGTHINH 318

Query: 321 VANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFG 380
           V +++   V A +  K K  ++K   + N   + V A I+NP + SQTKE L    SS+ 
Sbjct: 319 VMDKIVAEVRAHIESKTKQ-DIKPAEILNQFQLTVAARINNPRYSSQTKENLITPVSSYN 377

Query: 381 SKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGIS--KLEDANLA 438
            K   S+EF+K +   S +++ LL WA  +++    K    + +D R  S   +     A
Sbjct: 378 VKYSPSKEFIKAII-DSPMMKKLLEWAERRKAVQDIKEAEKEIQDARKASFHHIPKYRPA 436

Query: 439 GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEI 498
             +N  +  L + EGDS    A+  L    +   G+FPLRGK  NV + +   +    E 
Sbjct: 437 TNKNKAENILFVAEGDS----ALKPLQAAKKPHHGLFPLRGKPDNVFDKTIRHLAKQKEF 492

Query: 499 GNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQ 558
            ++ +ILGL   +   N  ++RY  L++ TD                             
Sbjct: 493 QDLIQILGLD--LHQFNSDTIRYSALVVATD----------------------------A 522

Query: 559 DHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK-VLSFYSMPDYEAWK 617
           D DG+HI+GLL      FW  L+    FL   +TPI+  T K GK  + F++  +YE W+
Sbjct: 523 DLDGAHIRGLLTVAFWRFWRPLID-EGFLRFLVTPII--TVKQGKETIEFFTEQEYEDWR 579

Query: 618 ESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
            +     + ++ KYYKGLG S + E  E F N   +        D+D + + LAF   K 
Sbjct: 580 AA--NPTAKYTRKYYKGLG-SWATEDMERFMNDPKYMVKVQPLTDEDVDNLVLAFDPSKA 636

Query: 678 EARKKWL 684
           +ARK WL
Sbjct: 637 DARKSWL 643


>gi|397644700|gb|EJK76511.1| hypothetical protein THAOC_01724 [Thalassiosira oceanica]
          Length = 450

 Score =  275 bits (702), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 155/388 (39%), Positives = 229/388 (59%), Gaps = 49/388 (12%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQ-ALWIYEEES-----------KTMIHRT- 72
           T+EE Y +K+ LEHILLRP  Y+G  E+    A W  + +S           +  +HR  
Sbjct: 63  TVEETYSRKTPLEHILLRPGMYVGPTERLPPVACWTLQSDSDRQNPIDGSVSRWAMHREE 122

Query: 73  ISYVPGLYKIFDEILVNAADNKQRDPK-MDAVKVVIDQEHD----LISVHNSGDGVPVEI 127
           +  +P L K+FDEILVNA+DN+ R P   + + V ID+  D     IS+ N+G  +PV++
Sbjct: 123 LRSIPALLKVFDEILVNASDNRLRHPSSCNRIDVTIDRGDDKSKPRISICNNGKSIPVQM 182

Query: 128 HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGK---- 183
           H++E +YVPEL+FGHLLT SN+DD+ ++ TGGR+GYGAKLTN+FS+EF++E  D      
Sbjct: 183 HKKEKMYVPELLFGHLLTGSNFDDDQRRLTGGRHGYGAKLTNVFSSEFVVEIRDTHSSRG 242

Query: 184 RLKKYKQVFTNNMGKKSEPNISKCKEGDN---WTKVSFKPDLAKF----NMTHLEDDVVA 236
           + K YKQV+ +NM   SE  +    + D    +TK++F PDLA+      MT L ++   
Sbjct: 243 KCKTYKQVWIDNMHTCSEAQVDIRLKQDTDLEYTKITFVPDLARLANDAKMTVLPEEEYK 302

Query: 237 LMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV---------TRFHERVNE 287
           LM++RVVD+AGC G  ++V LNG  + +  F +YVD+   S             + R+N 
Sbjct: 303 LMRRRVVDIAGCSGGKMRVTLNGEEISLPGFEDYVDLCRSSFEDDNGLPVPPMVYHRLNS 362

Query: 288 RWEICVTLSEGQ-FQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK---------- 336
           R+E+ V LS+ +    +SFVNG+ T +GGTH+D +ANQ+++ +   VN K          
Sbjct: 363 RYEVSVGLSDSKSLDSISFVNGMNTSRGGTHIDALANQISHFIADHVNTKMARQLDPLEL 422

Query: 337 NKNANVKAHNVKNHLWVFVNALIDNPAF 364
               +V    VK +L + VN LI+NP F
Sbjct: 423 KSPISVTPRMVKRNLMLCVNCLIENPHF 450


>gi|38305350|gb|AAR16193.1| antigen MLAA-44 [Homo sapiens]
          Length = 373

 Score =  275 bits (702), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 150/368 (40%), Positives = 230/368 (62%), Gaps = 12/368 (3%)

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            LL +L +D Q++EP WY+PIIP VL+NG+EGIGTGW+  +PNY+ R+IV NVRR+L G  
Sbjct: 4    LLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLEGLD 63

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FL 950
              PM P Y+ F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  L
Sbjct: 64   PHPMLPNYKNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVL 119

Query: 951  ESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
            E ++   D+  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M
Sbjct: 120  EPMLNGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSM 179

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVN 1067
             LFD  G +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + 
Sbjct: 180  VLFDHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQ 239

Query: 1068 GEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-I 1126
            G+I + NR + DL+  L Q+G+   P  +       A   ++++   ++    +G  S  
Sbjct: 240  GKITIENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDSQNQHDDSSSDSGTPSGP 299

Query: 1127 DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
            D++Y+L+M++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK
Sbjct: 300  DFNYILNMSLWSLTKEKVEELIKQRDTKGREVNDLKRKSPSDLWKEDLAAF---VEELDK 356

Query: 1187 SDARAEEE 1194
             +A+  E+
Sbjct: 357  VEAQERED 364


>gi|260323637|dbj|BAI44263.1| DNA topoisomerase II [Trichophyton rubrum]
 gi|260323639|dbj|BAI44264.1| DNA topoisomerase II [Trichophyton mentagrophytes]
          Length = 234

 Score =  274 bits (701), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 129/219 (58%), Positives = 170/219 (77%), Gaps = 3/219 (1%)

Query: 60  IYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNS 119
           +Y   ++ M +R +S+VPGLYKIFDEILVNAADNKQ DP M  ++V +D+E   ISV N+
Sbjct: 1   VYNSTTELMEYREVSFVPGLYKIFDEILVNAADNKQNDPNMSEIRVTLDKEAGEISVWNN 60

Query: 120 GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
           G G+PVEIH++E +Y+PELIFGHLLTSSNY+D  +K TGGRNGYGAKL NIFS EF +ET
Sbjct: 61  GRGIPVEIHKKEQIYIPELIFGHLLTSSNYNDMQEKVTGGRNGYGAKLCNIFSKEFTVET 120

Query: 180 ADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK 239
           AD K+ KK+K  +TNNM    +  I++CK GD++TKV+FKPD AKF M  ++DD  AL+K
Sbjct: 121 ADSKQKKKFKLTWTNNMSTMGKAKITECK-GDDYTKVTFKPDFAKFGMDGMDDDFEALVK 179

Query: 240 KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV 278
           +RV D+AG  G +VK  LNG R+P+KSF +Y++MY K++
Sbjct: 180 RRVYDMAGTCGTAVK--LNGTRIPIKSFKKYMEMYTKAI 216


>gi|33333786|gb|AAQ11994.1| topoisomerase II [Fusarium avenaceum]
          Length = 241

 Score =  273 bits (698), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 132/240 (55%), Positives = 177/240 (73%), Gaps = 2/240 (0%)

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNV 347
           RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+QV  H++ V+NKK K  ++K +++
Sbjct: 3   RWEVGFAVSDGTFQQVSFVNSIATTSGGTHVNYIADQVTKHLLEVLNKKRKGHSLKQNHL 62

Query: 348 KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
           +NH+++F+N  I+NPAF SQTKE +T + S FGSKC L ++FLKK+ AKS  ++ +L +A
Sbjct: 63  RNHIFIFINCYINNPAFTSQTKEQMTTKPSQFGSKCSLGDDFLKKI-AKSDALQNILDFA 121

Query: 408 NFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
             K  K L K DG+K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++
Sbjct: 122 EKKADKMLAKGDGSKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAIL 180

Query: 468 GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
             DR GVFPLRGKLLNVR+AS+ Q+  N+EI NIK+ LGLK    Y + K+LRYGHLMIM
Sbjct: 181 DPDRIGVFPLRGKLLNVRDASTEQIAKNAEISNIKQFLGLKHKATYTDTKNLRYGHLMIM 240


>gi|162532539|gb|ABY16681.1| topoisomerase II [Fusarium chlamydosporum]
          Length = 243

 Score =  270 bits (690), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 133/242 (54%), Positives = 174/242 (71%), Gaps = 2/242 (0%)

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNV 347
           RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+QV   ++A +NKK K   +K  ++
Sbjct: 4   RWEVGFAVSDGTFQQVSFVNSIATTSGGTHVNYIADQVTKSLLATLNKKRKGHTLKQAHL 63

Query: 348 KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
           +NH+++FVN  IDNPAF SQTKE +T + S FGSKC L ++FLKKV AKS  ++ +L +A
Sbjct: 64  RNHIFIFVNCYIDNPAFTSQTKEQMTTKPSMFGSKCVLGDDFLKKV-AKSDAIQNILDFA 122

Query: 408 NFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
             K  K + K+DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++
Sbjct: 123 EKKADKMMAKSDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAIL 181

Query: 468 GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
             DR GVFPLRGKLLNVR+AS +Q+  N EI NIK+ LGLK    Y + K+LRYGHLMIM
Sbjct: 182 DPDRIGVFPLRGKLLNVRDASPDQIAKNQEIQNIKQFLGLKHKASYTDTKNLRYGHLMIM 241

Query: 528 TD 529
            +
Sbjct: 242 AE 243


>gi|10121859|gb|AAG13402.1|AF285156_1 topoisomerase II beta-2 [Gallus gallus]
          Length = 264

 Score =  270 bits (689), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 137/238 (57%), Positives = 171/238 (71%), Gaps = 10/238 (4%)

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRD  M  +K+ ID E ++IS+ N+G G+PV  H+ E VYVP LIFG LLT
Sbjct: 28  ILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 87

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA  +    +KQ + NNM K SEP I 
Sbjct: 88  SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEPKI- 146

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
           K  EGD++T ++F+PDL+KF M +L+ D+V+LM +R  DLAG   K VKV LNG ++PV 
Sbjct: 147 KHFEGDDYTCITFQPDLSKFKMENLDKDIVSLMTRRAYDLAGSC-KGVKVMLNGKKLPVN 205

Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGG 315
            F  YVD+Y K        ++   HE VNERW++C+TLSE  FQQ+SFVN IAT KGG
Sbjct: 206 GFRSYVDLYVKDKLDETGVALKVIHEVVNERWDVCLTLSEKGFQQISFVNSIATTKGG 263


>gi|162532536|gb|ABY16680.1| topoisomerase II [Gibberella moniliformis]
          Length = 243

 Score =  268 bits (686), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 133/242 (54%), Positives = 176/242 (72%), Gaps = 2/242 (0%)

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNV 347
           RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+QV   ++  +NKK K   +K +++
Sbjct: 4   RWEVGFAVSDGTFQQVSFVNSIATTSGGTHVNYIADQVTEALLKALNKKRKGHALKQNHL 63

Query: 348 KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
           KNH+++FVN  I+NPAF SQTKE +T + S FGSKC+L E+FLKK+ AKS  ++ +L +A
Sbjct: 64  KNHIFIFVNCYINNPAFTSQTKEQMTTKPSQFGSKCKLGEDFLKKI-AKSDALQNILDFA 122

Query: 408 NFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
             K  K L K DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++
Sbjct: 123 EKKADKMLAKGDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAIL 181

Query: 468 GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
             DR GVFPLRGKLLNVR+AS +Q++ N+EI NIK+ LGLK    Y + K+LRYGHLMIM
Sbjct: 182 DPDRIGVFPLRGKLLNVRDASVDQIMKNAEIQNIKQFLGLKHKQTYTDTKNLRYGHLMIM 241

Query: 528 TD 529
            +
Sbjct: 242 AE 243


>gi|33333792|gb|AAQ11997.1| topoisomerase II [Fusarium sporotrichioides]
          Length = 241

 Score =  268 bits (686), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 132/240 (55%), Positives = 173/240 (72%), Gaps = 2/240 (0%)

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNV 347
           RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+Q+   ++  +NKK K   +K +++
Sbjct: 3   RWEVGFAVSDGTFQQVSFVNSIATTAGGTHVNYIADQITKSLLNALNKKRKGHTLKQNHL 62

Query: 348 KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
           +NH++VFVN  IDNP F SQTKE +TL+ S FGSKC L ++FLKKV AKS  ++ +L +A
Sbjct: 63  RNHIFVFVNCFIDNPTFSSQTKEQMTLKASQFGSKCVLGDDFLKKV-AKSDAIQNILDFA 121

Query: 408 NFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
             K  K + K+DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++
Sbjct: 122 EKKADKMMAKSDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAIL 180

Query: 468 GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
             DR GVFPLRGKLLNVR+AS +Q+  N EI NIK+ LGLK    Y + K+LRYGHLMIM
Sbjct: 181 DPDRIGVFPLRGKLLNVRDASPDQIAKNQEIQNIKQFLGLKHKAPYTDTKNLRYGHLMIM 240


>gi|162532550|gb|ABY16686.1| topoisomerase II [Fusarium udum]
          Length = 241

 Score =  268 bits (686), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 133/240 (55%), Positives = 175/240 (72%), Gaps = 2/240 (0%)

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNV 347
           RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+QV   ++  +NKK K   +K +++
Sbjct: 3   RWEVGFAVSDGTFQQVSFVNSIATTSGGTHVNYIADQVTEALLKALNKKRKGHALKQNHL 62

Query: 348 KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
           KNH+++FVN  I+NPAF SQTKE +T + S FGSKC+L E+FLKK+ AKS  ++ +L +A
Sbjct: 63  KNHIFIFVNCYINNPAFTSQTKEQMTTKPSQFGSKCKLGEDFLKKI-AKSDALQNILDFA 121

Query: 408 NFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
             K  K L K DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++
Sbjct: 122 EKKADKMLAKGDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAIL 180

Query: 468 GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
             DR GVFPLRGKLLNVR+AS +Q++ N+EI NIK+ LGLK    Y + K+LRYGHLMIM
Sbjct: 181 DPDRIGVFPLRGKLLNVRDASVDQIMKNTEIQNIKQFLGLKHKQTYTDTKNLRYGHLMIM 240


>gi|162532552|gb|ABY16687.1| topoisomerase II [Fusarium proliferatum]
          Length = 245

 Score =  268 bits (686), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 133/242 (54%), Positives = 176/242 (72%), Gaps = 2/242 (0%)

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNV 347
           RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+QV   ++  +NKK K   +K +++
Sbjct: 3   RWEVGFAVSDGTFQQVSFVNSIATTSGGTHVNYIADQVTEALLKALNKKRKGHALKQNHL 62

Query: 348 KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
           KNH+++FVN  I+NPAF SQTKE +T + S FGSKC+L E+FLKK+ AKS  ++ +L +A
Sbjct: 63  KNHIFIFVNCYINNPAFTSQTKEQMTTKPSQFGSKCKLGEDFLKKI-AKSDALQNILDFA 121

Query: 408 NFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
             K  K L K DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++
Sbjct: 122 EKKADKMLAKGDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAIL 180

Query: 468 GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
             DR GVFPLRGKLLNVR+AS +Q++ N+EI NIK+ LGLK    Y + K+LRYGHLMIM
Sbjct: 181 DPDRIGVFPLRGKLLNVRDASVDQIMKNAEIQNIKQFLGLKHKQTYTDTKNLRYGHLMIM 240

Query: 528 TD 529
            +
Sbjct: 241 AN 242


>gi|33333780|gb|AAQ11991.1| topoisomerase II [Fusarium venenatum]
 gi|33333788|gb|AAQ11995.1| topoisomerase II [Fusarium poae]
          Length = 241

 Score =  268 bits (685), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 131/240 (54%), Positives = 173/240 (72%), Gaps = 2/240 (0%)

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNV 347
           RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+Q+   ++  +NKK K   +K +++
Sbjct: 3   RWEVGFAVSDGTFQQVSFVNSIATTAGGTHVNYIADQITKSLLNALNKKRKGHTLKQNHL 62

Query: 348 KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
           +NH++VF+N  IDNPAF SQTKE +T + S FGSKC L ++FLKKV AKS  ++ +L +A
Sbjct: 63  RNHIFVFINCYIDNPAFSSQTKEQMTTKASQFGSKCVLGDDFLKKV-AKSDAIQNILDFA 121

Query: 408 NFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
             K  K + K+DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++
Sbjct: 122 EKKADKMMAKSDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAIL 180

Query: 468 GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
             DR GVFPLRGKLLNVR+AS +Q+  N EI NIK+ LGLK    Y + K+LRYGHLMIM
Sbjct: 181 DPDRIGVFPLRGKLLNVRDASPDQIAKNQEIQNIKQFLGLKHKTSYTDTKNLRYGHLMIM 240


>gi|33333794|gb|AAQ11998.1| topoisomerase II [Fusarium oxysporum f. sp. melonis]
 gi|162532546|gb|ABY16684.1| topoisomerase II [Fusarium oxysporum f. sp. lycopersici]
          Length = 241

 Score =  268 bits (684), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 133/240 (55%), Positives = 174/240 (72%), Gaps = 2/240 (0%)

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNV 347
           RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+QV   ++  +NKK K   +K  ++
Sbjct: 3   RWEVGFAVSDGTFQQVSFVNSIATTSGGTHVNYIADQVTEALLKALNKKRKGHALKQSHL 62

Query: 348 KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
           KNH+++FVN  I+NPAF SQTKE +T + S FGSKC+L E+FLKK+ AKS  ++ +L +A
Sbjct: 63  KNHIFIFVNCYINNPAFTSQTKEQMTTKPSQFGSKCKLGEDFLKKI-AKSDALQNILDFA 121

Query: 408 NFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
             K  K L K DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++
Sbjct: 122 EKKADKMLAKGDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAIL 180

Query: 468 GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
             DR GVFPLRGKLLNVR+AS +Q++ N+EI NIK+ LGLK    Y + K+LRYGHLMIM
Sbjct: 181 DPDRIGVFPLRGKLLNVRDASVDQIMKNAEIQNIKQFLGLKHKQTYTDTKNLRYGHLMIM 240


>gi|162532541|gb|ABY16682.1| topoisomerase II [Fusarium culmorum]
          Length = 241

 Score =  268 bits (684), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 131/240 (54%), Positives = 172/240 (71%), Gaps = 2/240 (0%)

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNV 347
           RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+Q+   ++  +NKK K   +K +++
Sbjct: 3   RWEVGFAVSDGTFQQVSFVNSIATTAGGTHVNYIADQITKSLLNTLNKKRKGHTLKQNHL 62

Query: 348 KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
           +NH++VF+N  IDNPAF SQTKE +T + S FGSKC L ++FLKKV AKS  ++ +L  A
Sbjct: 63  RNHIFVFINCYIDNPAFSSQTKEQMTTKASQFGSKCTLGDDFLKKV-AKSDAIQNILDMA 121

Query: 408 NFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
             K  K + K+DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++
Sbjct: 122 EKKADKMMAKSDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAIL 180

Query: 468 GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
             DR GVFPLRGKLLNVR+AS +Q+  N EI NIK+ LGLK    Y + K+LRYGHLMIM
Sbjct: 181 DPDRIGVFPLRGKLLNVRDASPDQIAKNQEIQNIKQFLGLKHKTSYTDTKNLRYGHLMIM 240


>gi|33333778|gb|AAQ11990.1| topoisomerase II [Gibberella pulicaris]
 gi|162532548|gb|ABY16685.1| topoisomerase II [Gibberella pulicaris]
          Length = 241

 Score =  267 bits (683), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 131/240 (54%), Positives = 173/240 (72%), Gaps = 2/240 (0%)

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNV 347
           RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+Q+   ++  +NKK K   +K +++
Sbjct: 3   RWEVGFAVSDGTFQQVSFVNSIATTAGGTHVNYIADQITKSLLNALNKKRKGHTLKQNHL 62

Query: 348 KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
           +NH++VF+N  IDNPAF SQTKE +T + S FGSKC L ++FLKKV AKS  ++ +L +A
Sbjct: 63  RNHIFVFINCYIDNPAFSSQTKEQMTTKASQFGSKCVLGDDFLKKV-AKSEAIQNILDFA 121

Query: 408 NFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
             K  K + K+DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++
Sbjct: 122 EKKADKMMAKSDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAIL 180

Query: 468 GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
             DR GVFPLRGKLLNVR+AS +Q+  N EI NIK+ LGLK    Y + K+LRYGHLMIM
Sbjct: 181 DPDRIGVFPLRGKLLNVRDASPDQIAKNQEIQNIKQFLGLKHKTSYTDTKNLRYGHLMIM 240


>gi|33333790|gb|AAQ11996.1| topoisomerase II [Gibberella moniliformis]
          Length = 241

 Score =  266 bits (681), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 132/240 (55%), Positives = 175/240 (72%), Gaps = 2/240 (0%)

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNV 347
           RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+QV   ++  +NKK K   +K +++
Sbjct: 3   RWEVGFAVSDGTFQQVSFVNSIATTSGGTHVNYIADQVTEALLKALNKKRKGHALKQNHL 62

Query: 348 KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
           KNH+++FVN  I+NPAF SQTKE +T + S FGSKC+L E+FLKK+ AKS  ++ +L +A
Sbjct: 63  KNHIFIFVNCYINNPAFTSQTKEQMTTKPSQFGSKCKLGEDFLKKI-AKSDALQNILDFA 121

Query: 408 NFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
             K  K L K DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++
Sbjct: 122 EKKADKMLAKGDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAIL 180

Query: 468 GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
             DR GVFPLRGKLLNVR+AS +Q++ N+EI NIK+ LGLK    Y + K+L+YGHLMIM
Sbjct: 181 DPDRIGVFPLRGKLLNVRDASVDQIMKNAEIQNIKQFLGLKHKQTYTDTKNLKYGHLMIM 240


>gi|37778804|gb|AAP31848.1| topoisomerase II [Fusarium lateritium]
          Length = 241

 Score =  265 bits (677), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 128/240 (53%), Positives = 174/240 (72%), Gaps = 2/240 (0%)

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNV 347
           RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+Q+   ++  +NKK K   +K  ++
Sbjct: 3   RWEVGFAVSDGTFQQVSFVNSIATTSGGTHVNYIADQITASLLKTINKKRKGHTLKQSHL 62

Query: 348 KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
           +NH+++FVN  I+NP+F+SQTKE +T + S+FGSKC L E+FLKK+ AKS  ++ +L +A
Sbjct: 63  RNHIFIFVNCYINNPSFNSQTKEQMTTKVSTFGSKCALGEDFLKKI-AKSDAIQNILDFA 121

Query: 408 NFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
             K  K + K DG +   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++
Sbjct: 122 EKKADKMMAKGDGGRRSRVSN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAIL 180

Query: 468 GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
             DR GVFPLRGKLLNVR+AS +Q+  N+EI NIK+ LGLK    Y + K+LRYGHLMIM
Sbjct: 181 DPDRIGVFPLRGKLLNVRDASVDQIAKNAEIQNIKQFLGLKHKQSYTDTKNLRYGHLMIM 240


>gi|208436012|gb|ACI28453.1| topoisomerase II [Fusarium udum]
          Length = 243

 Score =  265 bits (676), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 132/240 (55%), Positives = 174/240 (72%), Gaps = 2/240 (0%)

Query: 290 EICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKN 349
           E+   +S+G FQQVSFVN IAT  GGTHV+Y+A+QV   ++  +NKK K   +K +++KN
Sbjct: 1   EVGFAVSDGTFQQVSFVNSIATTSGGTHVNYIADQVTEALLKALNKKRKGHALKQNHLKN 60

Query: 350 HLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANF 409
           H+++FVN  I+NPAF SQTKE +T + S FGSKC+L E+FLKK+ AKS  ++ +L +A  
Sbjct: 61  HIFIFVNCYINNPAFTSQTKEQMTTKPSQFGSKCKLGEDFLKKI-AKSDALQNILDFAEK 119

Query: 410 KQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGR 469
           K  K L K DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++  
Sbjct: 120 KADKMLAKGDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAILDP 178

Query: 470 DRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTD 529
           DR GVFPLRGKLLNVR+AS +Q++ N+EI NIK+ LGLK    Y + K+LRYGHLMIM D
Sbjct: 179 DRIGVFPLRGKLLNVRDASVDQIMKNTEIQNIKQFLGLKHKQTYTDTKNLRYGHLMIMAD 238


>gi|321453493|gb|EFX64722.1| hypothetical protein DAPPUDRAFT_333898 [Daphnia pulex]
          Length = 407

 Score =  265 bits (676), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 157/395 (39%), Positives = 218/395 (55%), Gaps = 24/395 (6%)

Query: 29  EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
           E   KK +L  +L  P  YIG         W+YE +   MI R I Y PGL+KIFDEIL+
Sbjct: 20  EKVMKKMRLRDMLSIPSLYIGPTISFKNVKWVYEGDVG-MIQREIMYTPGLWKIFDEILI 78

Query: 89  NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
           NA  NK RDP+MD +K+ ID   ++I+ + +G G+P+  H+E+  ++P +IF  LL S N
Sbjct: 79  NAVKNKDRDPEMDTLKIDIDPIKNVITFYYNGKGIPIVKHEEQKTFIPSMIFDPLLPSFN 138

Query: 149 YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
             D  +  TGG N YG KL NIFST F +ETA      ++KQ +T+NM     P +    
Sbjct: 139 CTDEEETVTGGLNCYGIKLANIFSTAFELETASTDLCLRFKQTWTDNMTIAGIPVVEP-Y 197

Query: 209 EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
            G N+TK+++ PD  KF M  L  D +AL+ +RVV++A      V V LN   +P+ +F 
Sbjct: 198 SGPNYTKITYSPDFDKFQMDLLNRDTIALLSRRVVEVAAS-TPGVNVYLNDKPLPINNFK 256

Query: 269 EYVDMYPKS-VTRF-------HERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDY 320
           EYVD+  K  V R         E VNERWEI V  SE  FQQ+S  N   T KGG HV+Y
Sbjct: 257 EYVDLCLKGKVDRLGAQLKCVFEAVNERWEIAVVASEHGFQQISLANKFCTTKGGLHVEY 316

Query: 321 VANQVANHVMAVVNKKNK----NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
           +  +V  ++   + ++NK      +V    ++ H+ VFVN  I +P F   +KE L   Q
Sbjct: 317 ITERVTRYLFENLKRRNKRDKTGIHVHPQTIRKHIMVFVNCSIVSPIFKDLSKERL---Q 373

Query: 377 SSF-GSKCELSEEFLKKVTAKSGI----VETLLSW 406
            +F  +  E SE F  ++ A  GI    +ET L W
Sbjct: 374 GNFLYTSVEPSENFFTELEA-CGITELAMETTLEW 407


>gi|162532544|gb|ABY16683.1| topoisomerase II [Fusarium oxysporum f. sp. ciceris]
          Length = 243

 Score =  264 bits (674), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 132/240 (55%), Positives = 173/240 (72%), Gaps = 2/240 (0%)

Query: 290 EICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKN 349
           E+   +S+G FQQVSFVN IAT  GGTHV+Y+A+QV   ++  +NKK K   +K  ++KN
Sbjct: 1   EVGFAVSDGTFQQVSFVNSIATTSGGTHVNYIADQVTEALLKALNKKRKGHALKQSHLKN 60

Query: 350 HLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANF 409
           H+++FVN  I+NPAF SQTKE +T + S FGSKC+L E+FLKK+ AKS  ++ +L +A  
Sbjct: 61  HIFIFVNCYINNPAFTSQTKEQMTTKPSQFGSKCKLGEDFLKKI-AKSDALQNILDFAEK 119

Query: 410 KQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGR 469
           K  K L K DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++  
Sbjct: 120 KADKMLAKGDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAILDP 178

Query: 470 DRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTD 529
           DR GVFPLRGKLLNVR+AS +Q++ N+EI NIK+ LGLK    Y + K+LRYGHLMIM D
Sbjct: 179 DRIGVFPLRGKLLNVRDASVDQIMKNAEIQNIKQFLGLKHKQTYTDTKNLRYGHLMIMAD 238


>gi|321464200|gb|EFX75209.1| hypothetical protein DAPPUDRAFT_323396 [Daphnia pulex]
          Length = 451

 Score =  260 bits (665), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 149/419 (35%), Positives = 240/419 (57%), Gaps = 28/419 (6%)

Query: 3   VDKRLPLTTSNNANVVGPTAPNKTIEE---------MYQKKSQLEHILLRPDTYIGSIEK 53
           +   LP T S+      P+  N TI++         + ++ S++E +L  P++ + S E 
Sbjct: 36  IGSNLPATPSSTG---VPSLGNMTIDQQILSGIQSVIAKRTSKVEKMLSEPNSSMQSREP 92

Query: 54  HTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDL 113
               +W+YE++   +  R ++YVPGLY+IFDE+LVNAADNK +D  MD ++V ID + ++
Sbjct: 93  IEDVMWVYEDD--CIFQRQVTYVPGLYQIFDELLVNAADNKIKDMSMDTIRVDIDLKSNI 150

Query: 114 ISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFST 173
           I +  +G+G+PV   +E  +YVP LIF  L  S N  D  ++ TG RN +GAKL N+FST
Sbjct: 151 IKIFYNGEGIPVVEKEEAKMYVPSLIFCSLQPSFNICDEEEEVTGHRNCFGAKLANMFST 210

Query: 174 EFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDD 233
            F++E A  ++ +++KQ +  NM K   P I     G ++T+++F  D+ KF M  L+ D
Sbjct: 211 SFVLEIASKEQGQRFKQEWRTNMTKDKIPEILP-YSGSSFTEITFSLDMEKFKMDALDRD 269

Query: 234 VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV--------DMYPKSVTRFHERV 285
           ++A+  +R V++A C  + VKV LNG+ +P+ +F +YV        D + + +    E +
Sbjct: 270 ILAVFSRRAVEMAAC-TRGVKVFLNGNLLPISNFTDYVNLCLRGEKDCFGRQLECVSEVI 328

Query: 286 NERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAH 345
           ++ WEI V  S  +FQQ+SF N  AT +GG HV +++N V  H   ++ K+    ++  H
Sbjct: 329 SDSWEIAVA-SSNRFQQMSFANKYATTEGGRHVFHISNHVIEHFRRML-KEKVGTSLGKH 386

Query: 346 NVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLL 404
            V+ H+WVFVN  + N  F S  K  L +  S   S C  S  F  K+    G++E L+
Sbjct: 387 TVRKHIWVFVNCSLKNSTFKSPAKAKL-MDASLEMSMCTPSRAFFTKLN-DCGVLERLI 443


>gi|115534553|ref|NP_503483.2| Protein Y46H3C.4 [Caenorhabditis elegans]
 gi|351064298|emb|CCD72654.1| Protein Y46H3C.4 [Caenorhabditis elegans]
          Length = 616

 Score =  259 bits (661), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 125/254 (49%), Positives = 168/254 (66%), Gaps = 32/254 (12%)

Query: 665 GEAIELAFSKKKIEARKKWLLQF--EPGNH----------LDQKEKYIKYSDFVNKELIL 712
            +AI++ FSKKK E RK WL ++  E  +            D+  +++ + DFVN+EL+L
Sbjct: 13  ADAIDMVFSKKKSEERKDWLSKWMREKKDRKQQGLAEEYLYDKDTRFVTFKDFVNRELVL 72

Query: 713 FSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLA 772
           FS  D +RSIP +VDG KPGQRK+LF  FKR+     KVAQ +G V++ SAYHHGEQSL 
Sbjct: 73  FSNLDNERSIPCLVDGFKPGQRKVLFACFKRSDKHGVKVAQLAGGVADMSAYHHGEQSLM 132

Query: 773 STILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKL 832
           +TI+ +AQD+                    GGKD+ASA+YIFT+LSP+TR LFP  DD +
Sbjct: 133 TTIVHLAQDY--------------------GGKDSASAQYIFTQLSPVTRTLFPSHDDNV 172

Query: 833 LDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMM 892
           L +L E+ Q+IEP WY PI P VLVNG++GI TGW + IPNYNPR++V N++RL+ GE  
Sbjct: 173 LRFLYEENQRIEPEWYCPISPMVLVNGAQGIDTGWRTNIPNYNPRELVKNIKRLIAGEPQ 232

Query: 893 EPMHPWYRGFGGTI 906
           + + PWY+ F G I
Sbjct: 233 KALAPWYKNFRGKI 246



 Score = 97.8 bits (242), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 112/206 (54%), Gaps = 16/206 (7%)

Query: 998  LTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLEN 1057
            L + I  S+M LFD+ G ++   +PE I +EF+  R E Y +RK+  LE L+ +  +L N
Sbjct: 262  LQSVICMSSMVLFDAAGCLRTSTSPEAITQEFYDSRQEKYLQRKEYLLEVLQAQSKRLTN 321

Query: 1058 KVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDE---- 1109
            + RFIL  +N EIV  N+K+  ++ +L + GF   P    K  + ++   +G  DE    
Sbjct: 322  QARFILAKINKEIVFENKKKVAIVDDLIKMGFDADPVKKWKEEQKLKLRESGEMDEDDLA 381

Query: 1110 TEESEENPEVVNGVQSID-----YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKA 1164
            T   E++  V +  ++++     Y+YL  M I  ++ E+   L+ + ++   E+  L+K 
Sbjct: 382  TVAVEDDEGVSSAAKAVETKLSGYEYLFGMTILDVSEEETNKLINESEEKMTELRVLKKK 441

Query: 1165 TPESLWVKDLDALDMQLDELDKSDAR 1190
            T + LW +DLD     L ELDK +AR
Sbjct: 442  TWQDLWHEDLDNF---LSELDKQEAR 464


>gi|357141707|ref|XP_003572319.1| PREDICTED: DNA topoisomerase 2-like [Brachypodium distachyon]
          Length = 551

 Score =  248 bits (634), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 188/501 (37%), Positives = 265/501 (52%), Gaps = 76/501 (15%)

Query: 904  GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRG 963
            G IEK ++   G TY+ TG+I+ VNETTL I ELPI  WT+DY +FL S+       I  
Sbjct: 101  GRIEKISTTVEGSTYSTTGVIKFVNETTLLITELPIHCWTKDYLDFLMSL------RIEC 154

Query: 964  FRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV-IKKYDTP 1022
             R  + D   +  V + E++     QE + KKF L TT+ T+NMHLFD  G+ I+KY TP
Sbjct: 155  IRDINHD---NINVQVEEKNTENVTQESMEKKFNLITTVGTTNMHLFDRDGINIRKYKTP 211

Query: 1023 EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLL 1082
            E+ILEEFF +RLE YEKRKK QL++L+L+L K+ NKVRFILGV  G+I V +R+  DL+L
Sbjct: 212  EEILEEFFGLRLECYEKRKKAQLDSLDLDLWKITNKVRFILGVGRGDITVIDRETDDLVL 271

Query: 1083 ELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLE 1142
            EL +KGF PF K+S                  E+PE    V + DY+YLLS+ I ++  E
Sbjct: 272  ELYRKGFAPFSKSS------------------ESPEGGKRVLASDYEYLLSIPISSMVRE 313

Query: 1143 KVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNG 1202
            K+  L A++ +L E++ ++R++ P  LW+KDLDAL+ +LD LD    RAE ER++   N 
Sbjct: 314  KLHELYAEKAELEEKIKEVRRSEPRLLWMKDLDALEAELDRLDDL-KRAEIERLETLRN- 371

Query: 1203 NGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKAPAEKLD 1262
                      K+  K A  ND            GE   V K VK K     K  P  K  
Sbjct: 372  ---------RKKPTKKATAND------------GEA-GVCKPVKSKPATQKKGKPNTKAS 409

Query: 1263 DDE--EDEVPDLKQRLAK--LNEQLASTKLEPSPD--------QSGVMETEKVQVPAKKK 1310
              E   DE P L  R A   ++   A T++    D        ++G     K        
Sbjct: 410  VIEIVHDEAPQLDARPANNVVDSSSAHTEVLQKGDTCSNKGASKTGAEWGRKPTAAKTAP 469

Query: 1311 EPSKR--TAAQKKVVT-------VETSDSEDEIIIDDD--EAFEIAAPEEGKKGGRKAAG 1359
            +P+ R   A +K+ V+       +  +++E E++ +D+   A  +A+PE+  +  R    
Sbjct: 470  KPASRGTVATRKRTVSAAAAHGKINDAEAEKEMLAEDNIPRAAVVASPEKKVRRTRGRDA 529

Query: 1360 NSKAAKPAAETKKRGPAKKQQ 1380
                A+PAA   KRG  KK Q
Sbjct: 530  TVAVAEPAARL-KRGNKKKAQ 549



 Score =  107 bits (267), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 48/91 (52%), Positives = 64/91 (70%)

Query: 717 DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
           +LQ S+PS+VDGL  GQRK+LF +FK N  K  +V+  +    + +AY  G+QS   TI+
Sbjct: 6   ELQWSVPSVVDGLNRGQRKVLFTAFKNNLDKHTRVSWLADCAVKQAAYSCGQQSAEQTII 65

Query: 777 GMAQDFVGSNNINLLQPNGQFGTRNQGGKDA 807
            MAQDF+GSNN+NL  P+G FG R QGG+DA
Sbjct: 66  NMAQDFLGSNNLNLFDPSGPFGARYQGGEDA 96


>gi|224613376|gb|ACN60267.1| DNA topoisomerase 2-alpha [Salmo salar]
          Length = 742

 Score =  248 bits (632), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/371 (37%), Positives = 218/371 (58%), Gaps = 25/371 (6%)

Query: 830  DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
            D LL Y  +D Q++EP WY+PIIPTVLVNG++GIGTGW+S IPN++ R+IV N+ R+LNG
Sbjct: 1    DNLLKYNYDDNQRVEPEWYIPIIPTVLVNGADGIGTGWASRIPNFDIREIVNNIHRMLNG 60

Query: 890  EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE- 948
            E   P+ P Y+GF GTI++  + +    Y   G +  ++ TT+ I ELP++ WTQ Y+E 
Sbjct: 61   EEPLPLLPSYKGFKGTIDQLMTNQ----YMNNGEVAIIDSTTIEISELPVKTWTQAYKEN 116

Query: 949  FLESIIDQND---SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTS 1005
             LE +++  +   + I  +++Y  DT V F V ++EE +   +  GL K FKL  +++ +
Sbjct: 117  VLEPMLNGTEKVQALITDYKEYHTDTAVRFVVKMTEERLREAEAAGLHKVFKLQQSLTCN 176

Query: 1006 NMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGV 1065
            +M LFD  G +KKY+  + IL++FF +R+++Y  RK      L  E  KL N+ RFIL  
Sbjct: 177  SMVLFDHVGSLKKYELVQDILKDFFELRMKYYVLRKDWLAGMLGAESAKLTNQARFILEK 236

Query: 1066 VNGEIVVNNRKRTDLLLELRQKGFTPFP--------KNSKSIEAVVAGATDETEESEENP 1117
            + G +V+ N+ +  L+L L + G+   P        +  +S+E       ++ EE    P
Sbjct: 237  IEGTLVIENKPKKQLILMLTEMGYDSDPVKAWKEAQEKDRSVEETQDDEEEDKEEDATGP 296

Query: 1118 EVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
                     DY+YLL+M +  LT EK + L   RD    E++ L+K +P  LW +DL A 
Sbjct: 297  ---------DYNYLLNMPMWYLTKEKKEELCKQRDAKMTELNTLKKKSPADLWKEDLAAF 347

Query: 1178 DMQLDELDKSD 1188
              +L+ +++ D
Sbjct: 348  TEELERVEEKD 358


>gi|409090|dbj|BAA03132.1| DNA topoisomerase IIA [Rattus norvegicus]
          Length = 214

 Score =  247 bits (630), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 117/205 (57%), Positives = 151/205 (73%), Gaps = 5/205 (2%)

Query: 752 AQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASAR 811
           AQ +G V+E S+YHHGE SL  TI+ +AQ+FVGSNN+NLLQP GQFGTR  GGKD+AS R
Sbjct: 1   AQLAGSVAEMSSYHHGEMSLMMTIINLAQNFVGSNNLNLLQPIGQFGTRLHGGKDSASPR 60

Query: 812 YIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYI 871
           YIFT LSP+ R LFP  DD  L +L +D Q++EP WY+ IIP VL+NG+EGIGTGWS  I
Sbjct: 61  YIFTMLSPLARLLFPSKDDHTLRFLYDDNQRVEPEWYILIIPMVLINGAEGIGTGWSCKI 120

Query: 872 PNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETT 931
           PN++ R++V N+RRLL+GE   PM P Y+ + GTIE+ AS +    Y + G +  +N TT
Sbjct: 121 PNFDVREVVNNIRRLLDGEEPLPMLPSYKNYKGTIEELASNQ----YVINGEVAILNSTT 176

Query: 932 LRIKELPIRRWTQDYRE-FLESIID 955
           + I ELPIR WTQ Y+E  LE +++
Sbjct: 177 IEITELPIRTWTQTYKEQVLEPMLN 201


>gi|321473744|gb|EFX84711.1| hypothetical protein DAPPUDRAFT_47063 [Daphnia pulex]
          Length = 359

 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/363 (39%), Positives = 210/363 (57%), Gaps = 9/363 (2%)

Query: 36  QLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQ 95
           +++ ILL P  YIG ++   + +W+YEE++  MI R ISY PGL KIFDEI+VNA DNK 
Sbjct: 1   KIKDILLLPSLYIGPVDPIKEVMWVYEEQAG-MIQREISYAPGLQKIFDEIIVNAVDNKL 59

Query: 96  RDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKK 155
           RD  MD +KV ID   ++I V  +G G+PV  H +E + VP L+F H LTS N +   + 
Sbjct: 60  RDSSMDTLKVDIDPAKNVIKVFYNGKGIPVVEHDKEKMSVPSLVFCHSLTSFNCNHQEET 119

Query: 156 TTG-GRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWT 214
                 N +GAKL NIFS  F ++T      K +KQ +TNNM     P I     G+++T
Sbjct: 120 VINEDCNCFGAKLCNIFSRTFELKTGSKVECKSFKQTWTNNMTNAGTPEILP-YFGEDFT 178

Query: 215 KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY 274
           +++F  DL KFNM  L+ D+  L+ +RVVD+A    + VKV LNG  +P+ +F +YVD++
Sbjct: 179 EITFSVDLTKFNMAILDKDIQDLLSRRVVDVAAS-TRGVKVYLNGKIIPINNFEDYVDLF 237

Query: 275 PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVN 334
            K     +E V++  EI V  SE  F  VS VN  +T KGG HV +V  +V   +   + 
Sbjct: 238 LKGGDYVYEAVSDFCEIAVAPSEKGFMHVSQVNKYSTTKGGKHVHHVTERVVQKLQKYLK 297

Query: 335 KKNK----NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
           + NK    + +V+ + +K HL VFVN  I N  F+   K  +T +   + +  E S+ F 
Sbjct: 298 ETNKRNGFDVDVEFNMIKMHLMVFVNCSISNMCFNEPLKNKMTNQLFKY-AHFEPSDHFF 356

Query: 391 KKV 393
            +V
Sbjct: 357 TRV 359


>gi|506869|dbj|BAA03133.1| DNA topoisomerase IIB [Rattus norvegicus]
          Length = 214

 Score =  244 bits (623), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 118/208 (56%), Positives = 149/208 (71%), Gaps = 5/208 (2%)

Query: 752 AQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASAR 811
           AQ +G V+E SAYHHGEQ+L  TI+ +AQ+FVGSNNINLLQP GQFGTR  GGKDAAS R
Sbjct: 1   AQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPR 60

Query: 812 YIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYI 871
           YIFT LS + R LFP  DD LL +L +D Q++EP WY+PIIP VL+NG+EGIGTGW+  +
Sbjct: 61  YIFTMLSSLARLLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKL 120

Query: 872 PNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETT 931
           PNY+ R+IV NVRR+L G    PM P Y+ F GTI++    +    Y V+G I  V+  T
Sbjct: 121 PNYDAREIVDNVRRMLEGLDPHPMLPNYKNFKGTIQELGQNQ----YAVSGEIFVVDRNT 176

Query: 932 LRIKELPIRRWTQDYRE-FLESIIDQND 958
           +   ELP+R WTQ Y+E  LE +++  D
Sbjct: 177 VETTELPVRTWTQVYKEQVLEPMLNGTD 204


>gi|7025462|gb|AAF35892.1| topoisomerase II [Mytilus edulis]
          Length = 226

 Score =  241 bits (616), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 127/229 (55%), Positives = 163/229 (71%), Gaps = 15/229 (6%)

Query: 562 GSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLG 621
           GSHIKGLLINF+H FWP+LLK  + + EFITPIVK T K  +  SFYS+P++E WK    
Sbjct: 1   GSHIKGLLINFVHHFWPNLLK-NNVVEEFITPIVKVT-KGKEEKSFYSLPEFEEWKRD-T 57

Query: 622 GNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARK 681
            N  ++ +KYYKGLGTST+KE KEYF ++  HK  F ++  +D  +I LAFSKKKIE RK
Sbjct: 58  DNWHTYKVKYYKGLGTSTAKEAKEYFSDMDKHKIPFKYQGTEDDASITLAFSKKKIEERK 117

Query: 682 KWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
           +WL  F            P  +L  KE K+I Y++F+N+EL+LFS  D +RSIPS+VDGL
Sbjct: 118 EWLTNFMVERKRRLEMGLPEVYLYGKETKHISYNEFINRELVLFSNMDNERSIPSLVDGL 177

Query: 730 KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
           KPGQRK++F   KRN I+E KVAQ +G V+E S+YHHGEQSL STI+ +
Sbjct: 178 KPGQRKVIFTCIKRNLIRELKVAQLAGSVAEQSSYHHGEQSLMSTIINL 226


>gi|183986198|gb|AAI66287.1| Unknown (protein for MGC:185751) [Xenopus (Silurana) tropicalis]
          Length = 240

 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 111/195 (56%), Positives = 151/195 (77%), Gaps = 2/195 (1%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           ++E +YQKK+QLEHILLRPDTYIGS+E  TQ +W+++E+ + +  R +++VPGLYKIFDE
Sbjct: 26  SVERIYQKKTQLEHILLRPDTYIGSVEPVTQQMWVFDED-EGLNCRDVTFVPGLYKIFDE 84

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRDP M  +K+ I+ E + +SV N+G G+PV  H+ E V+VP LIFG LLT
Sbjct: 85  ILVNAADNKQRDPTMSCIKITINPESNTVSVWNNGKGIPVVEHKVEKVFVPALIFGQLLT 144

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
           SSNYDD+ KK TGGRNGYGAKL NIFS +F +ETA  +  K +KQ +T+NM   ++  I 
Sbjct: 145 SSNYDDDQKKVTGGRNGYGAKLCNIFSNKFTVETACREYKKVFKQTWTDNMSDAADAKI- 203

Query: 206 KCKEGDNWTKVSFKP 220
           K  +G+++T ++F+P
Sbjct: 204 KPFDGEDYTCITFQP 218


>gi|356566100|ref|XP_003551273.1| PREDICTED: uncharacterized protein LOC100789999 [Glycine max]
          Length = 492

 Score =  223 bits (567), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 113/210 (53%), Positives = 147/210 (70%), Gaps = 24/210 (11%)

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLE 951
            M PM PWY+GF GTIE T+ KE G  Y V G +EE+NE   RI ELPIR+WTQDY++FL+
Sbjct: 1    MVPMDPWYKGFKGTIE-TSPKEGG--YVVNGSVEEINEHNFRITELPIRKWTQDYKQFLD 57

Query: 952  SIIDQN----DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
            SI D +    D     FRQ  DD TV+ EV +  E ++   QEGLLKKFKLT++IST+NM
Sbjct: 58   SITDGSPNVKDPLSDDFRQNGDDATVNIEVRMKLEKIVGIMQEGLLKKFKLTSSISTNNM 117

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVN 1067
            HLFD++G IKKY+ PEQILEEFF +RL++YE+R                 KV F+ GVVN
Sbjct: 118  HLFDTEGKIKKYENPEQILEEFFLLRLKYYERR-----------------KVSFVFGVVN 160

Query: 1068 GEIVVNNRKRTDLLLELRQKGFTPFPKNSK 1097
            GE++V+N+K+ DL++EL+QKGFTP P+  +
Sbjct: 161  GEMIVSNKKKADLMIELQQKGFTPMPRKER 190


>gi|7500285|pir||T21619 hypothetical protein F32A11.5 - Caenorhabditis elegans
          Length = 263

 Score =  219 bits (557), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/242 (47%), Positives = 152/242 (62%), Gaps = 32/242 (13%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKH-TQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           +E+ YQKKS LEHILLRPD+YIGSIE +  + +W+Y                        
Sbjct: 51  VEDAYQKKSHLEHILLRPDSYIGSIEHNEKKPMWVY------------------------ 86

Query: 86  ILVNAADNK--QRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
              N  D+K  QRDPKM+ +K+ I+ E + ISV+N+G G+PV  H+ E VYVPELIFG L
Sbjct: 87  ---NMKDSKLEQRDPKMNTIKITINTEKNEISVYNNGKGIPVTQHKVEKVYVPELIFGAL 143

Query: 144 LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
           LTS NY+D+ KK TGGRNGYGAKL N+FST+  +ET+       +KQ + NNM +  EP 
Sbjct: 144 LTSYNYNDDEKKLTGGRNGYGAKLCNLFSTKVTLETSSVDYKSAFKQTWINNMTRDEEPT 203

Query: 204 ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
           I    + D +TK++F PDLAKF    L+DD+  LM +R  D+AG   K V V LNG R+P
Sbjct: 204 IVPSTDED-FTKITFSPDLAKFKTKELDDDICHLMARRAYDVAGSC-KGVAVSLNGKRIP 261

Query: 264 VK 265
           +K
Sbjct: 262 IK 263


>gi|238601284|ref|XP_002395371.1| hypothetical protein MPER_04586 [Moniliophthora perniciosa FA553]
 gi|215465985|gb|EEB96301.1| hypothetical protein MPER_04586 [Moniliophthora perniciosa FA553]
          Length = 250

 Score =  216 bits (551), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 116/235 (49%), Positives = 159/235 (67%), Gaps = 18/235 (7%)

Query: 204 ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
           I+K   G+ WT+V+F+PDL +F M  ++DD  +L++KRV DLAG + K VKV LN  R+ 
Sbjct: 6   ITKNSRGEEWTRVTFRPDLGRFGMDRIDDDTASLLRKRVYDLAGTV-KDVKVFLNDERLK 64

Query: 264 VKSFAEYVDMYPKSVTR----------------FHERVNERWEICVTLSEGQFQQVSFVN 307
           +K+F EYV MY  SV                   +E++  RWE+   +SEG F QVSF N
Sbjct: 65  IKNFKEYVQMYLNSVNAVAEEKSGGAAQPKQPLIYEQIGPRWEVAFAVSEGTFMQVSFAN 124

Query: 308 GIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            I+T KGGTHV+ +A+Q+A +++  + KKNK A VKA  +KNH+W+FVNALI+NP FDSQ
Sbjct: 125 SISTSKGGTHVNLLADQIAKNLITAIGKKNKAAAVKAGQIKNHMWIFVNALIENPTFDSQ 184

Query: 368 TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
           TKETLTL  S FG+K  +S++ LKK+  KS IVE +L+WA FK  + +KK DG+K
Sbjct: 185 TKETLTLPASKFGTKPVISDDVLKKI-QKSPIVENILNWAKFKADQQIKKTDGSK 238


>gi|435844544|ref|YP_007006648.1| gp41 [Sphingomonas phage PAU]
 gi|380885854|gb|AFF28039.1| gp41 [Sphingomonas phage PAU]
          Length = 640

 Score =  214 bits (545), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 193/685 (28%), Positives = 320/685 (46%), Gaps = 79/685 (11%)

Query: 24  NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
           N+ I + Y+ K ++EHIL R + ++GS    T+   I   E K    + I+Y+P + K+ 
Sbjct: 6   NEEILDKYRMKDEIEHILTRSEMFVGSKAPETKVTNIINSEDKVESQK-ITYIPAVLKVI 64

Query: 84  DEILVNAADNKQRD----PKMDAVKVVID-QEHDLISVHNSGDGVPVEIHQEEGVYVPEL 138
           DE+L N+ D  +R+          K+ I+ + +  I++ ++G G+P +IH   G  +P  
Sbjct: 65  DEVLSNSVDEYRRNIAGTSNSGVTKIDIEIRRNGHITIQDNG-GIPTDIHPLTGQPIPAF 123

Query: 139 IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGK 198
           +F +L TS+NYDD   +   G NG GA LTNIFS  F ++T+   + + Y + + NN+  
Sbjct: 124 LFSNLRTSTNYDDTKSRNVTGTNGVGAVLTNIFSNRFTVKTSLNPKGQTYIKTWENNLSV 183

Query: 199 KSEPNISKCKEGDNWTKVSFKPDLAKFNMTH-----LEDDVVALMKKRVVDLAGC---LG 250
             +    K K G   +   F+ D+++F++       + D+V++L K+R +D AG    L 
Sbjct: 184 TKDDVFEKSK-GFKGSIFDFEIDMSRFSLDENQEEIINDEVLSLFKRRCIDAAGANPGLT 242

Query: 251 KSVKVELNGHRVPVKSFAEYVDMYPK-SVTRFHERVNERWEICVTL-SEGQFQQVSFVNG 308
            S+K+E         SF +Y+  +     ++     N++WEI     ++ +  ++ FVNG
Sbjct: 243 ISLKIEDYERTWKFNSFKDYISTFSGIDASKLIGEKNDQWEIYYYPNADKEAYEIGFVNG 302

Query: 309 IATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQT 368
            A    G H + V    A   +  + K+NK          NH  VF+N  + NP + +QT
Sbjct: 303 -AECNIGRHFE-VGVVEAVEALGRLLKRNK-LTCDYRQFVNHCHVFINMNVPNPVYSNQT 359

Query: 369 KETLTLRQSSFGSKCELS-EEFLKKVTAKSGIVETLLSW-------ANFKQSKDLKKNDG 420
           KE L+ +      K   +  + LK++  +S I++ LL W          K+ +DL     
Sbjct: 360 KEKLSTKADKLTEKGRPALSQGLKRLLCESEIIQLLLDWHEQSKKAGERKKLRDLANEQA 419

Query: 421 TKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGK 480
            K +    ++KL DAN    RN  +C L + EG+SA +      +    +    + L+GK
Sbjct: 420 KKVK----VAKLVDANAKTNRN--ECELWVFEGESASS---GFRNARNPETQAKYDLKGK 470

Query: 481 LLNVREASSNQVLN-NSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFL 539
           ++N    S  Q+   N E  ++   + L       + +SLRYG ++I TD          
Sbjct: 471 VMNTFGMSRLQIFQRNVEYRDMVTAINLPIDNSKIDFESLRYGKIIITTDM--------- 521

Query: 540 LWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATN 599
                              D DG  I   LI+F +  +  LL+    +   I PI+ A  
Sbjct: 522 -------------------DVDGDSIAAQLISFYYHNYRELLE-AGMIYRAIAPIISA-E 560

Query: 600 KNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
           K+G+V  FYS+ ++      L G    WS++Y KG G+ TS E  E  QN  L +     
Sbjct: 561 KDGEVKLFYSVKEFN--DSGLRG----WSVRYLKGTGSMTSDEYTEMIQNSHLQQLKI-- 612

Query: 660 EDDQDGEAIELAFSKKKIEARKKWL 684
            D + G  +E  FS   I  RKK+ 
Sbjct: 613 -DGETGRVLEDWFS-NDISRRKKYF 635


>gi|242095826|ref|XP_002438403.1| hypothetical protein SORBIDRAFT_10g016452 [Sorghum bicolor]
 gi|241916626|gb|EER89770.1| hypothetical protein SORBIDRAFT_10g016452 [Sorghum bicolor]
          Length = 371

 Score =  210 bits (535), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/353 (37%), Positives = 207/353 (58%), Gaps = 35/353 (9%)

Query: 852  IPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG-EMMEPMHPWYRGFGGTIE--- 907
            +P +LVNG+EGIGTGWS+ IP YNP+DIV N++  + G E +E M PW+R F G +    
Sbjct: 5    LPMILVNGAEGIGTGWSTKIPCYNPKDIVHNLKLKIQGSETLEEMKPWFRHFHGEVSVKN 64

Query: 908  -KTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQ 966
              T +K++GVTYT +GII+ V++TTL+I ELP++   ++Y   L++ +D  D FI+ + +
Sbjct: 65   KTTKTKKSGVTYTASGIIKVVDKTTLKISELPVKISMENYERKLKTFMDGEDKFIKSYEK 124

Query: 967  YSDDTTVDFEVFLSE--ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
                  V+  + L E  E++++  +  L +KF+L T++ TSNMHL DS G+IKK D+PEQ
Sbjct: 125  KRGGNDVEIMIHLHENSENLVQANEVDLQRKFELRTSMGTSNMHLLDSNGIIKKNDSPEQ 184

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            I+            ++K V++   +L++   +NKVRFI  V  GEI + +  +  L  +L
Sbjct: 185  IIVNM---------QQKLVEMAGRDLKM--AQNKVRFIKAVRTGEIKLFDMDKEGLHTKL 233

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            R+  F  F +         A  + E ++  +  E++ G     YDYLL M I   TL  V
Sbjct: 234  REMQFEEFEQ---------AKPSWENQDGAKAQEIIRG-----YDYLLFMPIVNFTL-MV 278

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK--SDARAEEER 1195
            + L A+ +   + + +L+K  P+ LW+KDL+A + +LD  D   SDA  E  R
Sbjct: 279  EELEAECEHQKKNISELKKTKPKELWLKDLNAFEEELDHKDDGLSDAVHEAVR 331


>gi|291335076|gb|ADD94705.1| hypothetical protein [uncultured phage MedDCM-OCT-S09-C23]
          Length = 421

 Score =  208 bits (530), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/397 (32%), Positives = 208/397 (52%), Gaps = 31/397 (7%)

Query: 34  KSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMI---HRTISYVPGLYKIFDEILVNA 90
           KSQLEHIL RPDTY+GS  + T       + +  +    + ++ Y+P + +IF EI+ NA
Sbjct: 26  KSQLEHILHRPDTYVGSGRQQTFTDSHVGDITSVLPKIKNCSVKYIPAMLRIFVEIVSNA 85

Query: 91  ADNKQRDPK----MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
            DN  R  +    M  +KV IDQ+  L +V+N G  +P++ H E G  +PELIFG LLTS
Sbjct: 86  IDNIYRSEEEKVPMSKIKVTIDQDTGLTTVYNDGGWIPLDTHVETGKPIPELIFGVLLTS 145

Query: 147 SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGK--RLKKYKQVFTNNMGKKSEPNI 204
            NYDD  +++  GRNGYGAKLTN FST F IE    K      Y+Q ++NNM    +  +
Sbjct: 146 DNYDDQKQRSGSGRNGYGAKLTNAFSTMFKIEICVPKDDHFLVYRQEWSNNMRDCKKSTV 205

Query: 205 SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD---LAGCLGKSVKVELNGHR 261
           ++ K G   T VS+ PD  +F +    DD++++  + + D   +AGC   +V V LN  +
Sbjct: 206 TRRKVGPPSTCVSWTPDFERFKIKGYTDDMLSVYYRYIYDTAMIAGC--SNVSVYLNKTK 263

Query: 262 VPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
           +P+    +Y  ++  S      ++     + V      F+  +F NG+  + GG HV+  
Sbjct: 264 LPIGGLKDYSKLFTDSSESL--KIETSDSVVVLTPSSTFKHFAFTNGVHNVDGGVHVESW 321

Query: 322 ANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGS 381
            + +   ++A   KKN+   +  + +K+   +F+   + NP F SQ+K  LT+       
Sbjct: 322 TSGIFKPLLARFIKKNQ-PKISLNELKSFFSIFIKCDLPNPEFSSQSKTYLTVPSP---- 376

Query: 382 KCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKN 418
                     KVT     ++TL+ W+   + KD+ K+
Sbjct: 377 ----------KVTVSKKNIDTLMKWSFVTKVKDIIKS 403


>gi|74149415|dbj|BAE36361.1| unnamed protein product [Mus musculus]
          Length = 375

 Score =  205 bits (521), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/336 (36%), Positives = 198/336 (58%), Gaps = 10/336 (2%)

Query: 864  GTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGI 923
            GTGWS  IPN++ R++V N+RRLL+GE   PM P Y+ F GTIE+ AS +    Y + G 
Sbjct: 1    GTGWSCKIPNFDVREVVNNIRRLLDGEEPLPMLPSYKNFKGTIEELASNQ----YVINGE 56

Query: 924  IEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQNDSFIRGFRQYSDDTTVDFEVFL 979
            +  ++ TT+ I ELPIR WTQ Y+E  LE ++   ++  S I  +R+Y  DTTV F + +
Sbjct: 57   VAILDSTTIEISELPIRTWTQTYKEQVLEPMLNGTEKTPSLITDYREYHTDTTVKFVIKM 116

Query: 980  SEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEK 1039
            +EE +   ++ GL K FKL ++++ ++M LFD  G +KKYDT   IL +FF +RL++Y  
Sbjct: 117  TEEKLAEAERVGLHKVFKLQSSLTCNSMVLFDHVGCLKKYDTVLDILRDFFELRLKYYGL 176

Query: 1040 RKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-KNSKS 1098
            RK+  L  L  E  KL N+ RFIL  ++G+IV+ N+ + +L+  L Q+G+   P K  K 
Sbjct: 177  RKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKPKKELIKVLIQRGYDSDPVKAWKE 236

Query: 1099 IEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMAIGTLTLEKVQGLLADRDKLNEE 1157
             +  V    +  E   E     +  ++   ++YLL M +  LT EK   L   R++  +E
Sbjct: 237  AQQKVPDEEENEESDTETSTSDSAAEAGPTFNYLLDMPLWYLTKEKKDELCKQRNEKEQE 296

Query: 1158 VDDLRKATPESLWVKDLDALDMQLDELDKSDARAEE 1193
            ++ L++ +P  LW +DL     +L+ ++  + + E+
Sbjct: 297  LNTLKQKSPSDLWKEDLAVFIEELEVVEAKEKQDEQ 332


>gi|431809356|ref|YP_007236252.1| DNA topoisomerase [Salmonella phage SKML-39]
 gi|408387495|gb|AFU64500.1| DNA topoisomerase [Salmonella phage SKML-39]
          Length = 444

 Score =  204 bits (520), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 243/482 (50%), Gaps = 52/482 (10%)

Query: 703  SDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHS 762
            +DF+N++   FS+ +  R IP ++D LKP QRKILF + + N  KE  V +   + +  +
Sbjct: 10   TDFINQDHKQFSVVNSIRQIPQLIDSLKPSQRKILFAALEYN--KEEIVDRLGMFAAART 67

Query: 763  AYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITR 822
             Y  G ++++ TI+ MAQ F G+NNI     +GQFG+    G+DA+SARYI   +S + R
Sbjct: 68   NYKSGGENMSGTIVNMAQGFPGTNNIPYFDRDGQFGSIM--GRDASSARYISVAVSDVIR 125

Query: 823  FLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVAN 882
             +F K+D+ +L+Y     +++EP +++PI+P  LVNG  GIGTG+S+  P +  + +++ 
Sbjct: 126  KIFRKEDEGILEYNYLGEERLEPKFFLPILPMFLVNGINGIGTGYSTDTPCHCVKSVLSA 185

Query: 883  VRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRW 942
            +R LL GE  + + P++ G+ G   +T   E G  Y+  GI   VN TTL I E+P+  +
Sbjct: 186  LRALLRGEDPKDLKPYWNGYKG---ETGYTEEGRAYS-RGIFRRVNATTLHITEVPVGWF 241

Query: 943  TQDYREFLESIIDQNDSFIRGFRQYSDDTT---VDFEVFLSEESMMRTKQEGLLKKFKLT 999
             + Y    + ++    + I    +Y++DTT    D  V      + +   + + + FKL 
Sbjct: 242  AKTYET--KVLLPLYKAGI--LTEYANDTTEDGWDITVVFKRGELSKLSDDQVEQMFKLY 297

Query: 1000 TTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKV 1059
            + +       +D  GVI +Y   + +L  FF+ RL  YE R++  L+++   + KL N+ 
Sbjct: 298  SAVKPV-WTAWDEDGVIHRYAGWQDMLLPFFNYRLARYEDRRQYMLKDMADRIHKLTNRA 356

Query: 1060 RFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEV 1119
             FI   V    V + R+  D L  L Q  +  F                           
Sbjct: 357  LFIAWAV----VTDMRRSLDELKALFQTDYPDFDG------------------------- 387

Query: 1120 VNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
                   D D L  M + ++TL+  + LL   + L  +  +L K     L+ +DLD L+ 
Sbjct: 388  -------DLDELFKMPLSSITLDARERLLKQIENLEAQHKELSKKEDIDLYTEDLDDLEK 440

Query: 1180 QL 1181
             L
Sbjct: 441  AL 442


>gi|34419280|ref|NP_899293.1| topoisomerase II large subunit [Vibrio phage KVP40]
 gi|34332961|gb|AAQ64116.1| topoisomerase II large subunit [Vibrio phage KVP40]
          Length = 597

 Score =  204 bits (519), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 194/675 (28%), Positives = 322/675 (47%), Gaps = 97/675 (14%)

Query: 28  EEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEIL 87
           ++ +Q  S  +H+L RP  YIGS+++     ++  E      ++ I YVPGL KI +E++
Sbjct: 4   QDNFQILSDKQHVLKRPGMYIGSVDREAHERFVLGE------YKQIEYVPGLVKIINEVI 57

Query: 88  VNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP----VEIHQEEGVYVPELIFGHL 143
            N+ D   R     A  + +  E + I++ ++G G+P    ++ H  E +  PE  +   
Sbjct: 58  DNSLDEAIRTKFKFANVIEVKVEGNRITIADNGRGIPQDKVIDPHGNE-LLRPEAAWTRT 116

Query: 144 LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
              SN++D+  +TT G NG GA LTN FS +FI +T DGK       V  +         
Sbjct: 117 KAGSNFEDD--RTTVGMNGVGAALTNYFSHQFIGKTCDGKN-----TVTVSCSNNAERIF 169

Query: 204 ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
           +   K G   T V F PD  +F +  +      ++K R+  L+      +  + NG +  
Sbjct: 170 VRTSKGGTQGTSVEFIPDFNRFGVFGISPQDEEIIKDRLAALSVAF-PEITFKYNGKK-H 227

Query: 264 VKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
             +  +Y  M+   V+   + V     + +  S+ +F+  SF+NG+ TI GGTHVDY +N
Sbjct: 228 APTLKQYAKMFGTDVSFEFDNV----ALFIAASD-EFRHNSFINGVHTINGGTHVDYFSN 282

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGS 381
           ++A+ ++ ++ +K+K  NV    +KN L +  F+   +D P FDSQTKE LT  Q     
Sbjct: 283 KLADELIPMIKRKHK-INVPKPQLKNGLTIGLFIRNFVD-PKFDSQTKERLTSSQGDVSP 340

Query: 382 KC-ELS-EEFLKKVTAKSG----IVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDA 435
              ++S ++  KK+ A       I+E LL+  +  ++++L +    K ++ + +  ++ A
Sbjct: 341 YLKDISYDKIAKKILADDDIIMPIIEALLAKQHAAEARELARKQ-KKAQNAKVVDHIK-A 398

Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD--RFGVFPLRGKLLNVREASSNQVL 493
            + GG      TL LTEG SA      G  +  RD  + G  PLRGK+L+       +++
Sbjct: 399 TMPGG------TLFLTEGKSA-----IGYLIKVRDSKKHGGIPLRGKVLSTWGKRPAKIM 447

Query: 494 NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            N E+ +I  +L ++ G   ++++ + Y  + I+ D                        
Sbjct: 448 ENKELCDIMSVLNIQLG--NDDIRDMYYHDIGILVD------------------------ 481

Query: 554 FMLAQDHDG-SHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLSFYSMP 611
                D DG   I  LL+ F ++ WP L K     ++F+ TP+V ATNK  +   FYS+ 
Sbjct: 482 ----ADVDGKGSIFPLLLAFFYN-WPELYKQKR--IKFVRTPVVIATNKK-ETKWFYSID 533

Query: 612 DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
           +Y   K S      +W I+Y KGLG+ T KE K+          D +  DD      EL 
Sbjct: 534 EYRKAKLS-----KTWKIRYIKGLGSLTEKEYKKVINEPVF---DEIVIDDP--SCFELL 583

Query: 672 FSKKKIEARKKWLLQ 686
           F     + RK W+ Q
Sbjct: 584 FG-DDTDKRKDWMTQ 597


>gi|394774605|gb|AFN37277.1| DNA gyrase subunit B [Vibriophage phi-pp2]
          Length = 597

 Score =  202 bits (514), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 194/675 (28%), Positives = 321/675 (47%), Gaps = 97/675 (14%)

Query: 28  EEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEIL 87
           ++ +Q  S  +H+L RP  YIGS+++     ++  E      ++ I YVPGL KI +E++
Sbjct: 4   QDNFQILSDKQHVLKRPGMYIGSVDREAHERFVLGE------YKQIEYVPGLVKIINEVI 57

Query: 88  VNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP----VEIHQEEGVYVPELIFGHL 143
            N+ D   R     A  + +  E + I++ ++G G+P    ++ H  E +  PE  +   
Sbjct: 58  DNSLDEAIRTKFKFANVIEVKVEGNRITIADNGRGIPQDKVIDPHGNE-LLRPEAAWTRT 116

Query: 144 LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
              SN++D+  +TT G NG GA LTN FS +FI +T DGK       V  +         
Sbjct: 117 KAGSNFEDD--RTTVGMNGVGAALTNYFSHQFIGKTCDGKN-----TVTVSCSNNAERIF 169

Query: 204 ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
           +   K G   T V F PD  +F +  +      ++K R+  L+      +  + NG +  
Sbjct: 170 VRTSKGGTQGTSVEFIPDFNRFGVFGISPQDEEIIKDRLAALSVAF-PEITFKYNGKK-H 227

Query: 264 VKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVAN 323
             +  +Y  M+   V+   + V     + +  S+ +F+  SF+NG+ TI GGTHVDY +N
Sbjct: 228 APTLKQYAKMFGTDVSFEFDNV----ALFIAASD-EFRHNSFINGVHTINGGTHVDYFSN 282

Query: 324 QVANHVMAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGS 381
           ++A+ ++ ++ +K+K  NV    +KN L +  F+   +D P FDSQTKE LT  Q     
Sbjct: 283 KLADELIPMIKRKHK-INVPKPQLKNGLTIGLFIRNFVD-PKFDSQTKERLTSSQGDVSP 340

Query: 382 KC-ELS-EEFLKKVTAKSG----IVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDA 435
              ++S ++  KK+ A       I+E LL+  +  ++++L +    K ++ +    ++ A
Sbjct: 341 YLKDISYDKIAKKILADDDIIMPIIEALLAKQHAAEARELARKQ-KKAQNAKVADHIK-A 398

Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD--RFGVFPLRGKLLNVREASSNQVL 493
            + GG      TL LTEG SA      G  +  RD  + G  PLRGK+L+       +++
Sbjct: 399 TMPGG------TLFLTEGKSA-----IGYLIKVRDSKKHGGIPLRGKVLSTWGKRPAKIM 447

Query: 494 NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
            N E+ +I  +L ++ G   ++++ + Y  + I+ D                        
Sbjct: 448 ENKELCDIMSVLNIQLG--NDDIRDMYYHDIGILVD------------------------ 481

Query: 554 FMLAQDHDG-SHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLSFYSMP 611
                D DG   I  LL+ F ++ WP L K     ++F+ TP+V ATNK  +   FYS+ 
Sbjct: 482 ----ADVDGKGSIFPLLLAFFYN-WPELYKQKR--IKFVRTPVVIATNKK-ETKWFYSID 533

Query: 612 DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
           +Y   K S      +W I+Y KGLG+ T KE K+          D +  DD      EL 
Sbjct: 534 EYRKAKLS-----KTWKIRYIKGLGSLTEKEYKKVINEPVF---DEIVIDDP--SCFELL 583

Query: 672 FSKKKIEARKKWLLQ 686
           F     + RK W+ Q
Sbjct: 584 FG-DDTDKRKDWMTQ 597


>gi|282599189|ref|YP_003358501.1| gp52 topoisomerase II medium subunit [Shigella phage phiSboM-AG3]
 gi|226973495|gb|ACO94248.1| gp52 topoisomerase II medium subunit [Shigella phage phiSboM-AG3]
          Length = 446

 Score =  202 bits (513), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 246/487 (50%), Gaps = 52/487 (10%)

Query: 698  KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
            K I  +DFVN +   FS+ +  R IP ++D LKP QRKILF + + N  KE  V +   +
Sbjct: 7    KSITVTDFVNTDHKQFSVVNSIRQIPQLIDSLKPSQRKILFAALEYN--KEEIVDRLGMF 64

Query: 758  VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
             +  + Y  G ++++ TI+ MAQ F G+NNI     +GQFG+    G+DA+SARYI   +
Sbjct: 65   AAARTNYKSGGENMSGTIVNMAQGFPGTNNIPYFDRDGQFGSIM--GRDASSARYISVAV 122

Query: 818  SPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPR 877
            S + R +F K+D+ +L+Y     +++EP +++PI+P  LVNG  GIGTG+S+  P +  +
Sbjct: 123  SDVIRKIFRKEDEGILEYNYLGEERLEPKFFLPILPMFLVNGINGIGTGYSTDTPCHCVK 182

Query: 878  DIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKEL 937
             +++ +R LL GE  + + P++ G+ G   +T   E G  Y+  GI   VN TTL I E+
Sbjct: 183  SVLSALRALLRGEDPKDLKPYWNGYKG---ETGYTEEGRAYS-RGIFRRVNATTLHITEV 238

Query: 938  PIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTT---VDFEVFLSEESMMRTKQEGLLK 994
            P+  + + Y    + ++    + I    +Y++DTT    D  V      + +   E + +
Sbjct: 239  PVGWFAKTYET--KVLLPLYKAGI--LTEYANDTTEDGWDITVVFKRGELSKLSDEQVEQ 294

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             FKL +  +      +D  GVI +Y   + +L  FF+ RL  YE R++  L+++   + K
Sbjct: 295  MFKLYSA-NKPVWTAWDEDGVIHRYAGWQDMLLPFFNYRLSRYEDRRQYLLKDMADRIRK 353

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESE 1114
            L ++  FI         V+ R++ D+L  L  + +  F            G  DE     
Sbjct: 354  LGDRAVFIEWATR----VDLRQKIDVLKSLFMQDYPDF-----------GGDLDE----- 393

Query: 1115 ENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDL 1174
                            L  M + ++TL+  + LL   + L  +  +L K     L+ +DL
Sbjct: 394  ----------------LFKMPLSSITLDARERLLKQIENLEAQHKELSKKEDIDLYTEDL 437

Query: 1175 DALDMQL 1181
            D L+  L
Sbjct: 438  DDLEKAL 444


>gi|372199380|ref|YP_004957716.1| orf015 gene product [Escherichia phage vB_EcoM_CBA120]
 gi|344055552|gb|AEM91748.1| gp52 topoisomerase II medium subunit [Escherichia phage
            vB_EcoM_CBA120]
          Length = 443

 Score =  200 bits (508), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 133/399 (33%), Positives = 221/399 (55%), Gaps = 23/399 (5%)

Query: 698  KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
            K I  +DFVN +   FS+ +  R IP ++D LKP QRKILF + + N  KE  V +   +
Sbjct: 4    KSITVTDFVNTDHKEFSVVNSIRQIPQLIDSLKPSQRKILFAALEYN--KEEIVDRLGMF 61

Query: 758  VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
             +  + Y  G ++++ TI+ MAQ F G+NNI     +GQFG+    G++A+SARYI   +
Sbjct: 62   AAARTNYKSGGENMSGTIVNMAQGFPGTNNIPYFDRDGQFGS--IMGREASSARYISVAV 119

Query: 818  SPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPR 877
            S + R +F K+DD +L+Y     +++EP +++PI+P  LVNG  GIG+G+++  P +  +
Sbjct: 120  SEVIRKIFRKEDDGILEYNYLGEEKLEPKFFLPILPMFLVNGINGIGSGYATDTPCHCVK 179

Query: 878  DIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKEL 937
             +++ +R LL GE  + + P++ GF G   +T   E G  Y+  G+   VN TTL I E+
Sbjct: 180  SVLSALRALLRGEDPKDLKPYWNGFKG---ETGYTEEGRAYS-RGLFTRVNATTLNITEV 235

Query: 938  PIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTT---VDFEVFLSEESMMRTKQEGLLK 994
            PI  +++ Y    + ++    S I    +Y++DTT    D  V      + +   E + +
Sbjct: 236  PIGWFSKTYET--KVLLPLYKSGI--LTEYANDTTEDGWDITVVFKRGELSKLNDEQVEQ 291

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             F+L +  +      +D  GVI +YD  + +L  FF+ RL  YE R++  ++ L  ++ +
Sbjct: 292  MFRLYSA-NKPVWTAWDEDGVIHRYDGWKDMLLPFFNYRLSRYEDRRQYLIKELTDKIHR 350

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP 1093
            L N+  FI     G  VV + +R+  L EL+    T +P
Sbjct: 351  LNNRAIFI-----GWAVVTDMRRS--LTELKALFQTDYP 382


>gi|402578922|gb|EJW72875.1| hypothetical protein WUBG_16218 [Wuchereria bancrofti]
          Length = 202

 Score =  199 bits (507), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 107/199 (53%), Positives = 140/199 (70%), Gaps = 16/199 (8%)

Query: 558 QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWK 617
           QD DGSHIKGL+INFIH  WP L++  +F+ EFITPIVKAT K  + LSF+S+P+Y  W+
Sbjct: 2   QDQDGSHIKGLVINFIHYNWPVLIR-RNFVEEFITPIVKAT-KGKESLSFFSLPEYAEWR 59

Query: 618 ESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
            +   N  ++ IKYYKGLGTSTSKE KEYF ++  H+  F +  ++D  ++++AFSKKKI
Sbjct: 60  NNTE-NWKTYRIKYYKGLGTSTSKEAKEYFTDMVRHRIRFQYAGEEDDSSLDMAFSKKKI 118

Query: 678 EARKKWLLQF---------EPG---NHL-DQKEKYIKYSDFVNKELILFSMADLQRSIPS 724
           E RK WL  +         E G    +L D+  + + + DFVNKEL+LFS AD +RSIPS
Sbjct: 119 EDRKVWLTNWMAVRKKTRREQGLTEEYLYDKDTRAVSFKDFVNKELVLFSNADNERSIPS 178

Query: 725 MVDGLKPGQRKILFCSFKR 743
           +VDGLKPGQRK+LF  FKR
Sbjct: 179 LVDGLKPGQRKVLFTCFKR 197


>gi|448259960|ref|YP_007237337.1| putative DNA topoisomerase/gyrase gp52 [Dickeya phage
            vB_DsoM_LIMEstone1]
 gi|384228612|emb|CCD57576.1| putative DNA topoisomerase/gyrase gp52 [Dickeya phage
            vB_DsoM_LIMEstone1]
          Length = 444

 Score =  199 bits (506), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 242/482 (50%), Gaps = 52/482 (10%)

Query: 703  SDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHS 762
            +DF+N++   FS+ +  R IP ++D LKP QRKILF + + N  KE  V +   + +  +
Sbjct: 10   TDFINQDHKEFSVVNSIRQIPQLIDSLKPSQRKILFAALEYN--KEEIVDRLGMFAAART 67

Query: 763  AYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITR 822
             Y  G ++++ TI+ MAQ F G+NNI     +GQFG+    G+DA+SARYI   +S + R
Sbjct: 68   NYKSGGENMSGTIVNMAQGFPGTNNIPYFDRDGQFGSIM--GRDASSARYISVAVSDVIR 125

Query: 823  FLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVAN 882
             +F K+D+ +L+Y     +++EP +++PI+P  LVNG  GIG+G+++  P +  + ++  
Sbjct: 126  KIFRKEDEGILEYNYLGEEKLEPKFFLPILPMFLVNGINGIGSGYATDTPCHCVKSVLNA 185

Query: 883  VRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRW 942
            +R LL GE  + + P++ G+ G   +T   E G  Y+  G+   VN TTL I E+PI  +
Sbjct: 186  LRALLRGEDPKDLKPYWNGYKG---ETGYTEEGRAYS-RGLFTRVNATTLNITEVPIGWF 241

Query: 943  TQDYREFLESIIDQNDSFIRGFRQYSDDTT---VDFEVFLSEESMMRTKQEGLLKKFKLT 999
             + Y    + ++    + +    +Y++DTT    D  V      + +   E + + FKL 
Sbjct: 242  AKTYDT--KVLLPLYKAGV--LTEYANDTTEDGWDITVVFKRGELSKLSDEQVEQMFKLY 297

Query: 1000 TTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKV 1059
            +  +      +D  GVI +Y   + +L  FF+ RL  YE R++  L+++   + KL N+ 
Sbjct: 298  SA-NKPVWTAWDEDGVIHRYAGWQDMLLPFFNYRLARYEDRRQYMLKDMADRIHKLNNRA 356

Query: 1060 RFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEV 1119
             FI   V    V + R+  D L  L Q  +  F                           
Sbjct: 357  LFIAWAV----VTDMRRSLDELKALFQTDYPDFDG------------------------- 387

Query: 1120 VNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
                   D D L  M + ++TL+  + LL   + L  +  +L K     L+ +DLD L+ 
Sbjct: 388  -------DLDELFKMPLSSITLDARERLLKQIENLEAQHKELSKKEDIDLYTEDLDDLEK 440

Query: 1180 QL 1181
             L
Sbjct: 441  AL 442


>gi|422937789|ref|YP_007007991.1| DNA topoisomerase II medium subunit [Salmonella phage PhiSH19]
 gi|355398385|gb|AER70143.1| DNA topoisomerase II medium subunit [Salmonella phage PhiSH19]
          Length = 470

 Score =  199 bits (505), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/399 (33%), Positives = 221/399 (55%), Gaps = 23/399 (5%)

Query: 698  KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
            K I  +DFVN +   FS+ +  R IP ++D LKP QRKILF + + N  KE  V +   +
Sbjct: 31   KSITVTDFVNTDHKEFSVVNSIRQIPQLIDSLKPSQRKILFAALEYN--KEEIVDRLGMF 88

Query: 758  VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
             +  + Y  G ++++ TI+ MAQ F G+NNI     +GQFG+    G++A+SARYI   +
Sbjct: 89   AAARTNYKSGGENMSGTIVNMAQGFPGTNNIPYFDRDGQFGS--IMGREASSARYISVAV 146

Query: 818  SPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPR 877
            S + R +F K+DD +L+Y     +++EP +++PI+P  LVNG  GIG+G+++  P +  +
Sbjct: 147  SEVIRKIFRKEDDGILEYNYLGEEKLEPKFFLPILPMFLVNGINGIGSGYATDTPCHCVK 206

Query: 878  DIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKEL 937
             +++ +R LL GE  + + P++ GF G   +T   E G  Y+  G+   VN TTL I E+
Sbjct: 207  SVLSALRALLRGEDPKDLKPYWNGFKG---ETGYTEEGRAYS-RGLFTRVNATTLNITEV 262

Query: 938  PIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTT---VDFEVFLSEESMMRTKQEGLLK 994
            PI  +++ Y    + ++    S +    +Y++DTT    D  V      + +   E + +
Sbjct: 263  PIGWFSKTYET--KVLLPLYKSGV--LTEYANDTTEDGWDITVVFKRGELSKLNDEQVEQ 318

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             F+L +  +      +D  GVI +YD  + +L  FF+ RL  YE R++  ++ L  ++ +
Sbjct: 319  MFRLYSA-NKPVWTAWDEDGVIHRYDGWKDMLLPFFNYRLSRYEDRRQYLIKELTDKIHR 377

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP 1093
            L N+  FI     G  VV + +R+  L EL+    T +P
Sbjct: 378  LNNRAIFI-----GWAVVTDMRRS--LTELKALFQTDYP 409


>gi|351518455|ref|YP_004895183.1| unnamed protein product [Salmonella phage SFP10]
 gi|345451043|gb|AEN94107.1| DNA topoisomerase II medium subunit [Salmonella phage SFP10]
          Length = 443

 Score =  198 bits (504), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 221/399 (55%), Gaps = 23/399 (5%)

Query: 698  KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
            K I  +DFVN +   FS+ +  R IP ++D LKP QRKILF + + N  KE  V +   +
Sbjct: 4    KSITVTDFVNTDHKEFSVVNSIRQIPQLIDSLKPSQRKILFAALEYN--KEEIVDRLGMF 61

Query: 758  VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
             +  + Y  G ++++ TI+ MAQ F G+NNI     +GQFG+    G++A+SARYI   +
Sbjct: 62   AAARTNYKSGGENMSGTIVNMAQGFPGTNNIPYFDRDGQFGS--IMGREASSARYISVAV 119

Query: 818  SPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPR 877
            S + R +F K+DD +L+Y     +++EP +++PI+P  LVNG  GIG+G+++  P +  +
Sbjct: 120  SEVIRKIFRKEDDGILEYNYLGEEKLEPKFFLPILPMFLVNGINGIGSGYATDTPCHCVK 179

Query: 878  DIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKEL 937
             +++ +R LL GE  + + P++ GF G   +T   E G  Y+  G+   VN TTL I E+
Sbjct: 180  SVLSALRALLRGEDPKDLKPYWNGFKG---ETGYTEEGRAYS-RGLFTRVNATTLNITEV 235

Query: 938  PIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTT---VDFEVFLSEESMMRTKQEGLLK 994
            PI  +++ Y    + ++    + +    +Y++DTT    D  V      + +   E + +
Sbjct: 236  PIGWFSKTYET--KVLLPLYKAGV--LTEYANDTTEDGWDITVVFKRGELSKLNDEQVEQ 291

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             F+L +  +      +D  GVI +YD  + +L  FF+ RL  YE R++  ++ L  ++ +
Sbjct: 292  MFRLYSA-NKPVWTAWDEDGVIHRYDGWKDMLLPFFNYRLSRYEDRRQYLIKELTDKIHR 350

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP 1093
            L N+  FI     G  VV + +R+  L EL+    T +P
Sbjct: 351  LNNRAIFI-----GWAVVTDMRRS--LTELKALFQTDYP 382


>gi|56566998|gb|AAV98532.1| DNA topoisomerase II beta [Macaca mulatta]
          Length = 185

 Score =  195 bits (495), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 99/184 (53%), Positives = 126/184 (68%), Gaps = 11/184 (5%)

Query: 270 YVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
           YVD+Y K        ++   HE  NERW++C+TLSE  FQQ+SFVN IAT KGG HVDYV
Sbjct: 1   YVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYV 60

Query: 322 ANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFG 380
            +QV   ++ VV KKNK   +VK   VKNH+WVF+N LI+NP FDSQTKE +TL+  SFG
Sbjct: 61  VDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQPKSFG 120

Query: 381 SKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDANLAG 439
           SKC+LSE+F  K  +  GIVE++L+W  FK    L KK    K   ++GI KL+DAN AG
Sbjct: 121 SKCQLSEKFF-KAASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAG 179

Query: 440 GRNS 443
           G++S
Sbjct: 180 GKHS 183


>gi|326804513|ref|YP_004327384.1| hypothetical protein Vi01_013 [Salmonella phage Vi01]
 gi|301795163|emb|CBW37881.1| Topoisomerase IIM [Salmonella phage Vi01]
          Length = 467

 Score =  193 bits (491), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 216/396 (54%), Gaps = 20/396 (5%)

Query: 700  IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVS 759
            I  +D+VN +   FS+ +  R IP ++D LKP QRKILF + +  + KE  V +   + +
Sbjct: 30   INVTDYVNNDHKAFSVFNSIRQIPQLIDSLKPSQRKILFTALE--YGKEEIVDRLGMFAA 87

Query: 760  EHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSP 819
              + Y  G +++ +TI+ MAQ F G+NNI     +GQFG+    G+DA+SARYI   +S 
Sbjct: 88   ARTNYKSGGENMGNTIVNMAQAFPGTNNIPYFDRDGQFGS--IMGRDASSARYISVSVSD 145

Query: 820  ITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDI 879
            + R +F K+D+ +LDY     +Q+EP +++P+IP  LVNG  GIG+G+S+  P +  + +
Sbjct: 146  VIRKIFRKEDEGILDYNYLGEEQLEPKFFLPVIPMFLVNGINGIGSGYSTDTPCHCVKSV 205

Query: 880  VANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPI 939
            ++ +R LL GE    + P++ G+ G   +T   E G  Y+  GI + +N TTL I E+PI
Sbjct: 206  LSALRALLRGEDPTDLKPYWNGYKG---ETGYTEEGRAYS-RGIFKRINATTLHITEVPI 261

Query: 940  RRWTQDYREFLESIIDQNDSFIRGFRQYSDDTT---VDFEVFLSEESMMRTKQEGLLKKF 996
              + + Y    + ++    + +    +Y++DTT    D  V      + +     + + F
Sbjct: 262  GWFAKSYET--KVLLPLYKAGL--LTEYANDTTEDGWDITVVFKRGELSKLDDAQIEQMF 317

Query: 997  KLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLE 1056
            KL +  +      +D  GVI++Y   +++L  FF+ RL  YE R++  L+ +  ++ +L 
Sbjct: 318  KLYSA-NKPVWTAWDEDGVIRRYSGWKEMLLSFFNYRLIRYEDRRQYLLKEMTDKIHRLN 376

Query: 1057 NKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            N+  FI    +  +V + R+    L  L Q  +  F
Sbjct: 377  NRALFI----SWAVVTDMRRSITELKALFQTDYPDF 408


>gi|397133796|gb|AFO10305.1| DNA topoisomerase [Escherichia phage ECML-4]
          Length = 443

 Score =  193 bits (491), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 215/396 (54%), Gaps = 20/396 (5%)

Query: 700  IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVS 759
            I  +D+VN +   FS+ +  R IP ++D LKP QRKILF + +  + KE  V +   + +
Sbjct: 6    INVTDYVNNDHKAFSVFNSIRQIPQLIDSLKPSQRKILFTALE--YGKEEIVDRLGMFAA 63

Query: 760  EHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSP 819
              + Y  G +++ +TI+ MAQ F G+NNI     +GQFG+    G+DA+SARYI   +S 
Sbjct: 64   ARTNYKSGGENMGNTIVNMAQAFPGTNNIPYFDRDGQFGS--IMGRDASSARYISVSVSD 121

Query: 820  ITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDI 879
            + R +F K+D+ +LDY     +Q+EP +++P+IP  LVNG  GIG+G+S+  P +  + +
Sbjct: 122  VIRKIFRKEDEGILDYNYLGEEQLEPKFFLPVIPMFLVNGINGIGSGYSTDTPCHCVKSV 181

Query: 880  VANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPI 939
            +  +R LL GE    + P++ G+ G   +T   E G  Y+  GI + +N TTL I E+PI
Sbjct: 182  LGALRALLRGEDPTDLKPYWNGYKG---ETGYTEEGRAYS-RGIFKRINATTLHITEVPI 237

Query: 940  RRWTQDYREFLESIIDQNDSFIRGFRQYSDDTT---VDFEVFLSEESMMRTKQEGLLKKF 996
              + + Y    + ++    + +    +Y++DTT    D  V      + +     + + F
Sbjct: 238  GWFAKSYET--KVLLPLYKAGL--LTEYANDTTEDGWDITVVFKRGELSKLDDAQIEQMF 293

Query: 997  KLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLE 1056
            KL +  +      +D  GVI++Y   +++L  FF+ RL  YE R++  L+ +  ++ +L 
Sbjct: 294  KLYSA-NKPVWTAWDEDGVIRRYSGWKEMLLSFFNYRLIRYEDRRQYLLKEMTDKIHRLN 352

Query: 1057 NKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            N+  FI    +  +V + R+    L  L Q  +  F
Sbjct: 353  NRALFI----SWAVVTDMRRSITELKALFQTDYPDF 384


>gi|4218208|emb|CAA09753.1| DNA topoisomerase (ATP-hydrolysing) [Homo sapiens]
          Length = 717

 Score =  193 bits (490), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/303 (37%), Positives = 180/303 (59%), Gaps = 12/303 (3%)

Query: 897  PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII- 954
            P Y+ F GTI++    +    Y V+G I  V+  T+ I ELP+R WTQ Y+E  LE ++ 
Sbjct: 2    PNYKNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLN 57

Query: 955  --DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDS 1012
              D+  + I  +++Y  DTTV F V ++EE + + +  GL K FKL TT++ ++M LFD 
Sbjct: 58   GTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDH 117

Query: 1013 KGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVV 1072
             G +KKY+T + IL+EFF +RL +Y  RK+  +  L  E  KL N+ RFIL  + G+I +
Sbjct: 118  MGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITI 177

Query: 1073 NNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYL 1131
             NR + DL+  L Q+G+   P  +       A   DET+   ++    +G  S  D++Y+
Sbjct: 178  ENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYI 237

Query: 1132 LSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARA 1191
            L+M++ +LT EKV+ L+  RD    EV+DL++ +P  LW +DL A    ++ELDK +++ 
Sbjct: 238  LNMSLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVESQE 294

Query: 1192 EEE 1194
             E+
Sbjct: 295  RED 297


>gi|408387315|gb|AFU64321.1| DNA topoisomerase [Salmonella phage STML-13-1]
          Length = 443

 Score =  192 bits (487), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 215/396 (54%), Gaps = 20/396 (5%)

Query: 700  IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVS 759
            I  +D+VN +   FS+ +  R IP ++D LKP QRKILF + +  + KE  V +   + +
Sbjct: 6    INVTDYVNNDHKAFSVFNSIRQIPQLIDSLKPSQRKILFTALE--YGKEEIVDRLGMFAA 63

Query: 760  EHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSP 819
              + Y  G +++ +TI+ MAQ F G+NNI     +GQFG+    G+DA+S+RYI   +S 
Sbjct: 64   ARTNYKSGGENMGNTIVNMAQAFPGTNNIPYFDRDGQFGS--IMGRDASSSRYISVSVSD 121

Query: 820  ITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDI 879
            + R +F K+D+ +LDY     +Q+EP +++P+IP  LVNG  GIG+G+S+  P +  + +
Sbjct: 122  VIRKIFRKEDEGILDYNYLGEEQLEPKFFLPVIPMFLVNGINGIGSGYSTDTPCHCVKSV 181

Query: 880  VANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPI 939
            +  +R LL GE    + P++ G+ G   +T   E G  Y+  GI + +N TTL I E+PI
Sbjct: 182  LGALRALLRGEDPTDLKPYWNGYKG---ETGYTEEGRAYS-RGIFKRINATTLHITEVPI 237

Query: 940  RRWTQDYREFLESIIDQNDSFIRGFRQYSDDTT---VDFEVFLSEESMMRTKQEGLLKKF 996
              + + Y    + ++    + +    +Y++DTT    D  V      + +     + + F
Sbjct: 238  GWFAKSYET--KVLLPLYKAGL--LTEYANDTTEDGWDITVVFKRGELSKLDDAQIEQMF 293

Query: 997  KLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLE 1056
            KL +  +      +D  GVI++Y   +++L  FF+ RL  YE R++  L+ +  ++ +L 
Sbjct: 294  KLYSA-NKPVWTAWDEDGVIRRYSGWKEMLLSFFNYRLIRYEDRRQYLLKEMTDKIHRLN 352

Query: 1057 NKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF 1092
            N+  FI    +  +V + R+    L  L Q  +  F
Sbjct: 353  NRALFI----SWAVVTDMRRSITELKALFQTDYPDF 384


>gi|418488644|ref|YP_007002653.1| topoisomerase II medium subunit [Escherichia phage PhaxI]
 gi|312270883|gb|ADQ55849.1| topoisomerase II medium subunit [Escherichia phage PhaxI]
          Length = 446

 Score =  191 bits (486), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 219/399 (54%), Gaps = 23/399 (5%)

Query: 698  KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGY 757
            K I  ++F+N +   FS+ +  R IP ++D LKP QRKILF + + N  KE  V +   +
Sbjct: 7    KSITVTEFINGDHKEFSVVNSIRQIPQLIDSLKPSQRKILFAALEYN--KEEIVDRLGMF 64

Query: 758  VSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRL 817
             +  + Y  G ++++ TI+ MAQ F G+NNI     +GQFG+    G++A SARYI   +
Sbjct: 65   AAARTNYKSGGENMSGTIVNMAQGFPGTNNIPYFDRDGQFGS--IMGREAPSARYISVAV 122

Query: 818  SPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPR 877
            S + R +F K+DD +L+Y     +++EP +++PI+P  LVNG  GIG+G+++  P +  +
Sbjct: 123  SEVIRKIFRKEDDGILEYNYLGEEKLEPKFFLPILPMFLVNGINGIGSGYATDPPCHCVK 182

Query: 878  DIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKEL 937
             +++ +R LL G+  + + P++ GF G   +T   E G  Y   G+   VN TTL I E+
Sbjct: 183  SVLSALRALLRGKDPKDLKPYWNGFKG---ETGYTEEGRAY-CRGLFPRVNATTLNITEV 238

Query: 938  PIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTT---VDFEVFLSEESMMRTKQEGLLK 994
            PI  +++ Y    + ++    + +    +Y++DTT    D  V      + +   E + +
Sbjct: 239  PIGWFSKTYET--KVLLPLYKAGV--LTEYANDTTEDGWDITVVFKRGELSKLNDEQVEQ 294

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             F+L +  +      +D  GVI +YD  + +L  FF+ RL  YE R++  ++ L  ++ +
Sbjct: 295  MFRLYSA-NKPVWTAWDEDGVIHRYDGWKDMLLPFFNYRLSRYEDRRQYLIKELTDKIHR 353

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP 1093
            L N+  FI     G  V+ + +R+  L EL+    T +P
Sbjct: 354  LNNRAIFI-----GWAVITDMRRS--LTELKALFQTDYP 385


>gi|311992762|ref|YP_004009629.1| gp60plus39 DNA topoisomerase subunit [Acinetobacter phage Acj61]
 gi|295815051|gb|ADG35977.1| gp60plus39 DNA topoisomerase subunit [Acinetobacter phage Acj61]
          Length = 606

 Score =  191 bits (486), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 184/618 (29%), Positives = 287/618 (46%), Gaps = 81/618 (13%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S  EHI+ R   YIGS        +++ +  K      I YVPGL KI DEI+ N+ D  
Sbjct: 10  SDKEHIIKRSGMYIGSSANEEHERFVFGQFQK------IKYVPGLVKIIDEIIDNSIDEA 63

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELI--FGHLLTSSNYDD 151
            R     A K+ +     L+SV ++G G+P   I   EG  +P  +  +       N+ D
Sbjct: 64  IRTNFQFANKIDVTVSPHLVSVSDNGRGIPQAMITTPEGEQIPGPVAAWTRPKAGGNFGD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS----KC 207
           + ++ TGG NG G+ LTNIFST F   T DG          TN +  K + N+     K 
Sbjct: 124 DSERKTGGMNGVGSSLTNIFSTIFTGITCDG----------TNTITVKCKDNMDSIDWKS 173

Query: 208 KEGD-NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
           K G    T VSF+PD + F+   + D V+ +++ R+  L+  +   +  + NG RV + +
Sbjct: 174 KAGGRQGTSVSFEPDFSHFDCEIIGDQVIKIIEDRLQTLS-VVYPDIAFKFNGTRV-IGN 231

Query: 267 FAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVA 326
           F +Y   + + +        E+  I +  S+  F+Q+++VN I T  GG+H+DYV +++A
Sbjct: 232 FKKYAKQFDEHMLVMD---TEKCAIGIGRSDDGFRQLTYVNNIHTKNGGSHIDYVMDELA 288

Query: 327 NHVMAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCE 384
           N ++ ++ +K+K  ++    +K  + V  FV  +  N  FDSQTKE LT       S  +
Sbjct: 289 NEMIPLIKRKHK-IDINKARIKECITVVMFVRDM-SNMRFDSQTKERLTSPWGEIKSHID 346

Query: 385 LSEEFLKKVTAKS-----GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG 439
           +  + L ++   S      I+E +L  A    ++   +   +K      ++K   AN A 
Sbjct: 347 IDIKKLARMFVNSEEILMPIIEAVL--ARKLAAEKAAETKASKAASRAKVAKHIKAN-AY 403

Query: 440 GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
           G+   + TL LTEGDSA       LS   R+  G +PLRGK +N      + +L N E  
Sbjct: 404 GKEDIETTLFLTEGDSAIGYL---LSTRNRELHGGYPLRGKFMNTWGMLPSDILKNKESF 460

Query: 500 NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
           +I  I GL  G      + L Y ++ IMTD  +                          D
Sbjct: 461 DICAITGLVFG---EKAEGLNYRNIAIMTDADV--------------------------D 491

Query: 560 HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKES 619
             GS    LL  F +  WP L +     ++F+   V    K  +   FY+  +YEA K+ 
Sbjct: 492 GTGSIYPSLLAFFAN--WPELFE--QGRIKFVKTPVWICQKGKEQKWFYTSDEYEAVKDE 547

Query: 620 LGGNASSWSIKYYKGLGT 637
           L G    W+ +Y KGLG+
Sbjct: 548 LKG----WNARYIKGLGS 561


>gi|414086091|ref|YP_006986281.1| DNA topoisomerase II large subunit [Cronobacter phage
           vB_CsaM_GAP161]
 gi|378566416|gb|AFC22112.1| DNA topoisomerase II large subunit [Cronobacter phage
           vB_CsaM_GAP161]
          Length = 631

 Score =  191 bits (485), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 197/678 (29%), Positives = 312/678 (46%), Gaps = 82/678 (12%)

Query: 19  GPTAPNK--TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYV 76
            P AP K   ++E +   S  +HI  RP+ Y+GS+ K     +I  +       R + YV
Sbjct: 15  APEAPAKGAKVDESFCL-SDRDHIRKRPNMYVGSVNKEAHERFIMGQ------FRKVEYV 67

Query: 77  PGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPV-EIHQEEGVYV 135
            GL KI +EIL N+ D   R     A K+ +  +H+L+++ ++G G+P  ++   EG  V
Sbjct: 68  EGLVKIINEILDNSIDEAIRTDFKYANKIEVKIDHNLVTISDNGRGIPQDDVRTPEGKIV 127

Query: 136 PELIFGHLL--TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFT 193
           P+ +    +  + SN+DD   + T G NG G+ LTN +S  FI ET++GKR     +V  
Sbjct: 128 PKPVAAWTMAKSGSNFDDE-NRVTMGMNGVGSFLTNCYSAIFIGETSNGKR-----KVTI 181

Query: 194 NNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSV 253
           N        +       +  T V F PD + F +  ++++   ++K R++ LA     +V
Sbjct: 182 NCTDGAQNMDYRTSPTKEQGTTVKFTPDFSIFGVDGIDEETKEVIKDRLMALAVAF-PAV 240

Query: 254 KVELNGHRVPVKSFAEYVDMY-PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATI 312
           K   NG  +P K FA Y  MY  K++T    + N +    +  +E  F+Q SFVNG+ T 
Sbjct: 241 KFTYNGDILPNK-FAMYGAMYGDKTIT----QTNNKISFILASTEDGFKQKSFVNGLDTK 295

Query: 313 KGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLW--VFVNALIDNPAFDSQTKE 370
            GG HVD + + + + +  ++ KK     +    VK  L   VF++   + PAFDSQTKE
Sbjct: 296 NGGVHVDTMIDGIYSELEPMI-KKTHAIEIPKARVKECLTLVVFLHNF-NAPAFDSQTKE 353

Query: 371 TLTLRQSSFGSKCELS-EEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGI 429
            LT     F +   L+ ++  K++   S I+  ++  A  ++            +  +  
Sbjct: 354 KLTNTAGEFNNHAGLNYKKIAKQIMDTSEIITPIIESALIRKQAAEAAAITKAKKKAKKA 413

Query: 430 SKLEDANLAG-GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREAS 488
              +    +G   +  + TL LTEGDSA       +     +  G FPLRGK LN    S
Sbjct: 414 KVAKHVPASGIDTDGVETTLFLTEGDSAVG---QFIECRNEETQGAFPLRGKPLNTWGMS 470

Query: 489 SNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAW 548
           + +VL N E+  +  IL L  G    +   + Y ++ IM D                   
Sbjct: 471 NLEVLKNKELSELMAILNLHPG----DSSEMTYDNIGIMVD------------------- 507

Query: 549 ITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLS- 606
                     D DG  I  LLI F  S WP L +     + +I TPI+ A  K GK    
Sbjct: 508 ---------ADVDGGDILTLLIAFF-SRWPELFEKKK--IRYIRTPIIIA--KVGKDEKW 553

Query: 607 FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
           FYS+ D+  +++       +  ++Y KGLG S  KE  +      L K D +   D+  +
Sbjct: 554 FYSLEDFAPFRD------KAKEVRYIKGLG-SLRKEDYDRVLGDQL-KYDTIVLGDEYKD 605

Query: 667 AIELAFSKKKIEARKKWL 684
            +EL F  +  + RK W+
Sbjct: 606 VLELCFGDES-DPRKDWV 622


>gi|109289993|ref|YP_656238.1| gp39plus60 DNA topoisomerase II large subunit [Aeromonas phage 25]
 gi|104345666|gb|ABF72566.1| gp39plus60 DNA topoisomerase II large subunit [Aeromonas phage 25]
          Length = 607

 Score =  191 bits (485), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 190/672 (28%), Positives = 297/672 (44%), Gaps = 99/672 (14%)

Query: 38  EHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRD 97
           EH++LRP+ Y+GS+       +++ +      ++++SYVPGL KI DEI+ N+ D   R 
Sbjct: 12  EHVILRPNMYVGSVAYEPHERFLFGK------YQSVSYVPGLVKIIDEIIDNSVDEGIRT 65

Query: 98  PKMDAVKVVIDQEHDL----ISVHNSGDGVPVEIHQEEGVYVPELI--FGHLLTSSNYDD 151
               A K  ID   DL    ++V ++G G+P  +       +P+ +  +   +  SN+DD
Sbjct: 66  DFKFANK--IDIRFDLLEGSVTVVDNGRGIPQSMVNTPDGEMPKPVAAWTQTMAGSNFDD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
             K+ + G NG G+ LTN FS  FI ET DGK                       C +G 
Sbjct: 124 T-KRVSMGMNGVGSSLTNFFSKTFIGETCDGKNFLTVT-----------------CSDGA 165

Query: 212 ---NW---------TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
              NW         T V F PD   F    ++  +V ++  R+  L+    K +K  +NG
Sbjct: 166 SQVNWETKPGKIKGTSVYFIPDEKHFEGKTIDQQIVDIISDRITALSVVFPK-IKFTING 224

Query: 260 HRVPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
               +K FAEY  M+           N+ + I +  S   F+QVS+VNG+    GG+H+D
Sbjct: 225 EVASMK-FAEYAKMFGDESLILE---NDNFSIAICNSPEGFRQVSYVNGLNIKNGGSHID 280

Query: 320 YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNAL-IDNPAFDSQTKETLTLRQSS 378
           Y+ + +A+ ++  + +K+K    KA  +K  L + V    + N  FDSQTKE LT     
Sbjct: 281 YLVDGIADELIPSIKRKHKIEISKAR-IKECLTMIVAVRGMSNLRFDSQTKERLTNPLGE 339

Query: 379 FGSKCELSEEFL-KKVTAKSGIVETLLSWANFKQ-SKDLKKNDGTKTEDVRGISKLEDAN 436
             S  EL  + L K++     I+  ++  A  +  + +       +    +         
Sbjct: 340 VKSHIELDFKKLGKQIMNNDAILMPIIEAALARHLAAEKAALTKAQKAAAKTKVAKHIKA 399

Query: 437 LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
            + G  S++ TL LTEGDSA       LSV   +  G + LRGK++N      + VL N 
Sbjct: 400 GSWGDISKETTLFLTEGDSAIGYL---LSVRDSELHGGYALRGKVMNTWGMKGSDVLKNR 456

Query: 497 EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
           E+ +I  I+GL      ++V++ +Y ++ IMTD                           
Sbjct: 457 ELADICAIMGLDLA-NPDDVENRKYKNVAIMTDA-------------------------- 489

Query: 557 AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAW 616
             D  GS    LL  F  S WP L  +    V F+   V   +K  +   FY++ +++A 
Sbjct: 490 DPDGQGSIYPCLLAFF--SRWPKLYDLGC--VRFVKTPVVILSKGKQTKWFYTITEFDAQ 545

Query: 617 KESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFV--WEDDQDGEAIELAFSK 674
           KE   G    W ++Y KGLG+    E  E   N      D    WE     E  E+    
Sbjct: 546 KEKYKG----WELRYIKGLGSLREHEYSEVVNNPQYDIVDLGPDWE-----ELFEMLLGD 596

Query: 675 KKIEARKKWLLQ 686
           +  E RK+W+ Q
Sbjct: 597 EA-ELRKQWMSQ 607


>gi|401824853|gb|AFQ22543.1| hypothetical protein [Stenotrophomonas phage IME13]
          Length = 607

 Score =  190 bits (483), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 186/671 (27%), Positives = 294/671 (43%), Gaps = 97/671 (14%)

Query: 38  EHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRD 97
           EH++LRP+ Y+GS+       +++ +      ++++SYVPGL KI DEI+ N+ D   R 
Sbjct: 12  EHVILRPNMYVGSVAYEPHERFLFGK------YQSVSYVPGLVKIIDEIIDNSVDEGIRT 65

Query: 98  PKMDAVKVVIDQEHDL----ISVHNSGDGVPVEIHQEEGVYVPELI--FGHLLTSSNYDD 151
               A K  ID   DL    ++V ++G G+P  +       +P+ +  +   +  SN+DD
Sbjct: 66  DFKFANK--IDIRFDLLEGSVTVVDNGRGIPQSLVNTPDGEMPKPVAAWTQTMAGSNFDD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
             K+ + G NG G+ LTN FS  FI ET DGK                       C +G 
Sbjct: 124 T-KRVSMGMNGVGSSLTNFFSKTFIGETCDGKNFLTVT-----------------CSDGA 165

Query: 212 ---NW---------TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
              NW         T V F PD   F    ++  +V ++  R+  L+    K +K  +NG
Sbjct: 166 SQVNWETKPGKIKGTSVYFIPDEKHFEGKTIDQQIVDIISDRITALSVVFPK-IKFTING 224

Query: 260 HRVPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
               +K FAEY  M+           N+ + I +  S   F+QVS+VNG+    GG+H+D
Sbjct: 225 EVASMK-FAEYAKMFGDESLILE---NDNFSIAICNSPEGFRQVSYVNGLNIKNGGSHID 280

Query: 320 YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
           Y+ + +++ ++  + +K+K    KA   +    + +   + N  FDSQTKE LT      
Sbjct: 281 YLIDGISDELIPSIKRKHKIEISKARIKECLTMIVIVRGMSNLRFDSQTKERLTNPLGEV 340

Query: 380 GSKCELSEEFL-KKVTAKSGIVETLLSWANFKQ-SKDLKKNDGTKTEDVRGISKLEDANL 437
            S  EL  + L K++     I+  ++  A  +  + +       +    +          
Sbjct: 341 KSHIELDFKKLGKQIMNNDAILMPIIEAALARHLAAEKAALTKAQKAAAKTKVAKHIKAG 400

Query: 438 AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
           + G  +++ TL LTEGDSA       LSV   D  G + LRGK++N      + VL N E
Sbjct: 401 SWGDTTKETTLFLTEGDSAIGYL---LSVRDSDLHGGYALRGKVMNTWGMKGSDVLKNRE 457

Query: 498 IGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLA 557
           + +I  I+GL      ++V++ +Y ++ IMTD                            
Sbjct: 458 LADICAIMGLDLA-NPDDVENRKYKNVAIMTDA--------------------------D 490

Query: 558 QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWK 617
            D  GS    LL  F  S WP L       V F+   V   +K  +   FY++ +++A K
Sbjct: 491 PDGQGSIYPCLLAFF--SRWPELYN--QGCVRFVKTPVVILSKGKQTKWFYTITEFDAQK 546

Query: 618 ESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFV--WEDDQDGEAIELAFSKK 675
           E   G    W ++Y KGLG+    E  E   N      D    WE     E  E+    +
Sbjct: 547 EKYKG----WELRYIKGLGSLREHEYSEVVNNPQYDIVDLGPDWE-----ELFEMLLGDE 597

Query: 676 KIEARKKWLLQ 686
             E RK+W+ Q
Sbjct: 598 A-ELRKQWMSQ 607


>gi|162532534|gb|ABY16679.1| topoisomerase II [Fusarium solani]
          Length = 184

 Score =  190 bits (482), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 96/184 (52%), Positives = 130/184 (70%), Gaps = 2/184 (1%)

Query: 288 RWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNV 347
           RWE+   +S+G FQQVSFVN IAT  GGTHV+Y+A+QV   ++  +NKK K   +K +++
Sbjct: 3   RWEVGFAVSDGTFQQVSFVNSIATTSGGTHVNYIADQVTEALLKALNKKRKGHALKQNHL 62

Query: 348 KNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
           KNH+++FVN  I+NPAF SQTKE +T + S FGSKC+L E+FLKK+ AKS  ++ +L +A
Sbjct: 63  KNHIFIFVNCYINNPAFTSQTKEQMTTKPSQFGSKCKLGEDFLKKI-AKSDALQNILDFA 121

Query: 408 NFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
             K  K L K DG K   V   +KL +AN AG R   +CTLILTEGDSAK LA++G +++
Sbjct: 122 EKKADKMLAKGDGNKRSRVNN-AKLVEANFAGTRRGHECTLILTEGDSAKGLAVSGRAIL 180

Query: 468 GRDR 471
             DR
Sbjct: 181 DPDR 184


>gi|408386948|gb|AFU63957.1| hypothetical protein [Salmonella phage STML-198]
          Length = 608

 Score =  189 bits (481), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 187/633 (29%), Positives = 288/633 (45%), Gaps = 71/633 (11%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEI 86
           IE   Q  S  EH+L RP  YIGS+       +++ E       + + YV G+ K+ DEI
Sbjct: 2   IENKIQMLSDKEHVLKRPGMYIGSVSNEFHERFVFGE------FKRVQYVAGVLKLIDEI 55

Query: 87  LVNAADNKQRDPKMDA--VKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHL 143
           + N+ D   R     A  + V ID     ++V ++G G+P   +   EG  +P  +    
Sbjct: 56  IDNSVDEAIRTSFKFANKISVNIDSSTSKVTVEDNGRGIPQAMVTTPEGEEIPGPVAAWT 115

Query: 144 LTSS--NYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            T +  N+  + ++ TGG+NG G+ LTNIFS  F   T+DG+   +     +NN    S 
Sbjct: 116 KTKAGGNFGADEERKTGGQNGVGSSLTNIFSVMFKGTTSDGEN--ELTVSCSNNSDNVSW 173

Query: 202 PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            +     +G   TKV F PD + F M + +D    +M  R+  LA    K ++ + N  +
Sbjct: 174 KSKKSSYKG---TKVEFIPDFSHFEMNNFDDVYFDIMLDRLQTLAVVYPK-IEFKFNNKK 229

Query: 262 VPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
           V   +F +Y   Y K+     E   E + + +  S   F+Q+++VN I T  GG+H+DYV
Sbjct: 230 VD-SNFKKYSKQYDKNAIIIDE---ENYSLAIGNSPDGFRQMTYVNNIHTKNGGSHIDYV 285

Query: 322 ANQVANHVMAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSF 379
            +++AN ++  + +K+K   V    +K    V  F+  +  N  FDSQTKE LT      
Sbjct: 286 IDEIANELIPAIKRKHK-IEVNKARIKECFTVLMFIRDM-SNLRFDSQTKERLTSPWGEI 343

Query: 380 GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG 439
            S   L  + +     KS  +   +  A   +    +K   TK       +K+     AG
Sbjct: 344 KSHLNLDAKKISNQIMKSDAILMPIIEAALARKLAAEKAAETKAAKKAAKAKVHKHIKAG 403

Query: 440 --GRNSEQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNVREASSNQVLNN 495
             G +  + TL LTEGDSA      G  +  RDR   G +PLRGK++N    S+ + L N
Sbjct: 404 EYGNDKVETTLFLTEGDSA-----IGYLINTRDRALHGGYPLRGKVMNTWGMSAGEALKN 458

Query: 496 SEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFM 555
            EI +I  I GL  G +Y+   SL Y ++ IMTD  +                       
Sbjct: 459 KEIFDICAITGLVIGEDYD---SLNYKNIAIMTDADV----------------------- 492

Query: 556 LAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEA 615
              D  GS    LL  F +  WP L +     + F+   V   +K  +   +Y+  +YEA
Sbjct: 493 ---DGTGSIYPSLLAFFAN--WPKLFE--EGRIRFVKTPVIIMSKGSEQKWYYNAAEYEA 545

Query: 616 WKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQ 648
            K+ L G    W ++Y KGLG+    E +   Q
Sbjct: 546 EKDKLAG----WKLRYIKGLGSLEEDEYERVIQ 574


>gi|310722198|ref|YP_003969022.1| unnamed protein product [Aeromonas phage phiAS4]
 gi|306021041|gb|ADM79576.1| DNA topoisomerase II large subunit [Aeromonas phage phiAS4]
          Length = 607

 Score =  189 bits (480), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 187/671 (27%), Positives = 293/671 (43%), Gaps = 97/671 (14%)

Query: 38  EHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRD 97
           EH++LRP+ Y+GS+       +++ +      ++++SYVPGL KI DEI+ N+ D   R 
Sbjct: 12  EHVILRPNMYVGSVAYEPHERFLFGK------YQSVSYVPGLVKIIDEIIDNSVDEGIRT 65

Query: 98  PKMDAVKVVIDQEHDL----ISVHNSGDGVPVEIHQEEGVYVPELI--FGHLLTSSNYDD 151
               A K  ID   DL    ++V ++G G+P  +       +P+ +  +   +  SN+DD
Sbjct: 66  DFKFANK--IDIRFDLLEGSVTVADNGRGIPQSLVNTPDGEMPKPVAAWTQTMAGSNFDD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
              + + G NG G+ LTN FS  FI ET DGK                       C +G 
Sbjct: 124 T-NRVSMGMNGVGSSLTNFFSKTFIGETCDGKNFLTVT-----------------CSDGA 165

Query: 212 ---NW---------TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
              NW         T V F PD   F    ++  +V ++  R+  L+    K +K  +NG
Sbjct: 166 SQVNWETKPGKIKGTSVYFIPDEKHFEGKTIDQQIVDIISDRITALSVVFPK-IKFTING 224

Query: 260 HRVPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
               +K FAEY  M+           N+ + I +  S   F+QVS+VNG+    GG+H+D
Sbjct: 225 EVASMK-FAEYAKMFGDESLILE---NDNFSIAICNSPEGFRQVSYVNGLNIKNGGSHID 280

Query: 320 YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
           Y+ + +A+ ++  + +K K    KA   +    + V   + N  FDSQTKE LT      
Sbjct: 281 YLIDGIADELIPSIKRKYKIEISKARIKECLTMIVVVRGMSNLRFDSQTKERLTNPLGEV 340

Query: 380 GSKCELSEEFL-KKVTAKSGIVETLLSWANFKQ-SKDLKKNDGTKTEDVRGISKLEDANL 437
            S  EL  + L K++     I+  ++  A  +  + +       +    +          
Sbjct: 341 KSHIELDFKKLGKQIMNNDAILMPIIEAALARHLAAEKAALTKAQKAAAKTKVAKHIKAG 400

Query: 438 AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
           + G  S++ TL LTEGDSA       LSV   +  G + LRGK++N      + VL N E
Sbjct: 401 SWGDISKETTLFLTEGDSAIGYL---LSVRDSELHGGYALRGKVMNTWGMKGSDVLKNRE 457

Query: 498 IGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLA 557
           + +I  I+GL      ++V++ +Y ++ IMTD                            
Sbjct: 458 LADICAIMGLDLA-NPDDVENRKYKNVAIMTDA--------------------------D 490

Query: 558 QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWK 617
            D  GS    LL  F  S WP L  +    V F+   V   +K  +   FY++ +++A K
Sbjct: 491 PDGQGSIYPCLLAFF--SRWPKLYDLGC--VRFVKTPVVILSKGKQTKWFYTITEFDAQK 546

Query: 618 ESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFV--WEDDQDGEAIELAFSKK 675
           E   G    W ++Y KGLG+    E  E   N      D    WE     E  E+    +
Sbjct: 547 EKYKG----WELRYIKGLGSLREHEYSEVVNNPQYDIVDLGPDWE-----ELFEMLLGDE 597

Query: 676 KIEARKKWLLQ 686
             E RK+W+ Q
Sbjct: 598 A-ELRKQWMSQ 607


>gi|448260548|ref|YP_007348642.1| DNA topoisomerase large subunit [Klebsiella phage KP27]
 gi|370343357|gb|AEX26486.1| DNA topoisomerase large subunit [Klebsiella phage KP27]
          Length = 632

 Score =  189 bits (479), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 189/660 (28%), Positives = 301/660 (45%), Gaps = 79/660 (11%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S  +HI LRP+ Y+GS+ K     +I  +      +R + YV GL KI +EIL N+ D  
Sbjct: 32  SDRDHIRLRPNMYVGSVNKEAHERFIMGQ------YRKVEYVEGLVKIINEILDNSIDEA 85

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVPV-EIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  +H+L+ + ++G G+P  ++   +G  VP+ +    +  + SN+DD
Sbjct: 86  IRTEFKHANKIDVTIDHNLVKISDNGRGIPQDDVKTPDGKIVPKPVAAWTMAKSGSNFDD 145

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
              + T G NG G+ LTN +S+ FI ETA+GKR     +V  N        +       +
Sbjct: 146 K-NRVTMGMNGVGSFLTNCYSSIFIGETANGKR-----KVTINCTDGAQNIDYRTSPSKE 199

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T V F PD + F +T ++++   ++K R++ LA     SVK   NG  +  + F  Y 
Sbjct: 200 QGTTVKFTPDFSMFGVTGIDEETKEVIKDRLMALAVAF-PSVKFTYNGETLSNR-FPLYA 257

Query: 272 DMY-PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
            MY  K++     + N R    +  +E  F+Q SFVNG+ T  GG HV+ + + + + + 
Sbjct: 258 SMYGDKTIV----QTNNRLSFILASTEDGFKQKSFVNGLDTKNGGVHVECMIDGIYSELE 313

Query: 331 AVVNKKNKNANVKAHNVKNHLW--VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELS-E 387
            ++ KK+     KA  VK  L   VF++   + PAFDSQTKE L      F +   L+ +
Sbjct: 314 PMIKKKHSIEIPKAR-VKECLTLVVFLHNF-NAPAFDSQTKERLANTAGEFNNHANLNYK 371

Query: 388 EFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG-GRNSEQC 446
           +  K +     I+  ++  A  ++            +  +     +    +G      + 
Sbjct: 372 KIAKMIMDTPEIITPIIESALIRKQAAEAAAITKAKKKAKKAKIAKHVPASGIDTPGVET 431

Query: 447 TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
           TL LTEGDSA       +     +  G FPLRGK LN    S   ++ N E+  +  IL 
Sbjct: 432 TLFLTEGDSAVG---QFIECRNEETQGAFPLRGKPLNTWGMSFTDIIKNKELFELMAILN 488

Query: 507 LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
           +  G    +   + Y ++ IM D                             D DG  I 
Sbjct: 489 IHPG----DTSGMTYDNIGIMVD----------------------------ADVDGGDIL 516

Query: 567 GLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLS-FYSMPDYEAWKESLGGNA 624
            LL+ F  S WPSL       + +I TPIV A  K G+    FYS+ ++  +++      
Sbjct: 517 TLLLAFF-SRWPSLFTEKR--IRYIRTPIVIA--KVGREEKWFYSLDEFAPFRD------ 565

Query: 625 SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
            +  ++Y KGLG S  KE  +      L K D +  DD+  E +EL F  +  + RK W+
Sbjct: 566 KAKDVRYIKGLG-SLRKEDYDRVLGDQL-KYDVIVLDDEYKEVLELCFGDES-DPRKDWV 622


>gi|294661429|ref|YP_003579882.1| DNA topoisomerase II large subunit [Klebsiella phage KP15]
 gi|292660590|gb|ADE34838.1| DNA topoisomerase II large subunit [Klebsiella phage KP15]
          Length = 632

 Score =  189 bits (479), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 192/660 (29%), Positives = 307/660 (46%), Gaps = 79/660 (11%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S  +HI LRP+ Y+GS+ K     +I  +      +R + YV GL KI +EIL N+ D  
Sbjct: 32  SDRDHIRLRPNMYVGSVNKEAHERFIMGQ------YRKVEYVEGLVKIINEILDNSIDEA 85

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVPV-EIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  +H+L+ + ++G G+P  ++   +G  VP+ +    +  + SN+DD
Sbjct: 86  IRTEFKHANKIDVTIDHNLVKISDNGRGIPQDDVKTPDGKIVPKPVAAWTMAKSGSNFDD 145

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
              + T G NG G+ LTN +S+ FI ETA+GKR     +V  N        +       +
Sbjct: 146 K-NRVTMGMNGVGSFLTNCYSSIFIGETANGKR-----KVTINCTDGAQNIDYRTSPSKE 199

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T V F PD + F +T ++++   ++K R++ LA     SVK   NG  +  + F  Y 
Sbjct: 200 QGTTVKFTPDFSMFGVTGIDEETKEVIKDRLMALAVAF-PSVKFTYNGETLSNR-FPLYA 257

Query: 272 DMY-PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
            MY  K++     + N R    +  +E  F+Q SFVNG+ T  GG HV+ + + + + + 
Sbjct: 258 SMYGDKTIV----QTNNRLSFILASTEDGFKQKSFVNGLDTKNGGVHVECMIDGIYSELE 313

Query: 331 AVVNKKNKNANVKAHNVKNHLW--VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEE 388
            ++ KK+     KA  VK  L   VF++   + PAFDSQTKE L      F +   L+ +
Sbjct: 314 PMIKKKHSIEIPKAR-VKECLTLVVFLHNF-NAPAFDSQTKERLANTAGEFNNHANLNYK 371

Query: 389 FLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSE--QC 446
            + K+   +  + T +  +   + +  +    TK +     +K+     A G ++   + 
Sbjct: 372 KIAKMIMDTPEIITPIIESALIRKQAAEAAAITKAKKKAKKAKIAKHVPASGIDTPGIET 431

Query: 447 TLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILG 506
           TL LTEGDSA       +     +  G FPLRGK LN    S   ++ N E+  +  IL 
Sbjct: 432 TLFLTEGDSAVG---QFIECRNEETQGAFPLRGKPLNTWGMSFTDIIKNKELFELMAILN 488

Query: 507 LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIK 566
           +  G    +   + Y ++ IM D                             D DG  I 
Sbjct: 489 IHPG----DTSGMTYDNIGIMVD----------------------------ADVDGGDIL 516

Query: 567 GLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLS-FYSMPDYEAWKESLGGNA 624
            LL+ F  S WPSL       + +I TPIV A  K G+    FYS+ ++  +++      
Sbjct: 517 TLLLAFF-SRWPSLFAEKR--IRYIRTPIVIA--KVGREEKWFYSLDEFAPFRD------ 565

Query: 625 SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
            +  ++Y KGLG S  KE  +      L K D +  DD+  E +EL F  +  + RK W+
Sbjct: 566 KAKDVRYIKGLG-SLRKEDYDRVLGDQL-KYDVIVLDDEYKEVLELCFGDES-DPRKDWV 622


>gi|157311305|ref|YP_001469348.1| gp60+39 topoisomerase II large subunit [Enterobacteria phage Phi1]
 gi|149380509|gb|ABR24514.1| gp60+39 topoisomerase II large subunit [Enterobacteria phage Phi1]
          Length = 607

 Score =  188 bits (478), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 190/622 (30%), Positives = 288/622 (46%), Gaps = 76/622 (12%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR--TISYVPGLYKIFDEILVNAAD 92
           S  EH+L R   YIGS          YEE  + +  +   ISYVPGL KI DEI+ N+ D
Sbjct: 8   SDREHVLKRAGMYIGSTT--------YEEHQRFLFGKWTKISYVPGLVKIIDEIIDNSVD 59

Query: 93  NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE-IHQEEGVYVPELIFGHLLT--SSNY 149
              R     A  + +D ++++++V ++G G+P   +   EG  +P+ +     T   SN+
Sbjct: 60  EAIRTNFEFANVISVDIQNNIVTVTDNGRGIPQHMVTTPEGTQIPQPVAAWTRTKAGSNF 119

Query: 150 DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTN---NMGKKSEPNISK 206
           DD   + T G NG G+ L+N FS  F   T DG+     +   TN   N+   S+P  SK
Sbjct: 120 DDT-NRLTQGMNGVGSSLSNFFSDWFTGVTCDGETEMTVQC--TNGAENITWSSKP--SK 174

Query: 207 CKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
            K     TKV+F PD   F    +++ V+ ++  R+  L+    K +  + NG R+ V  
Sbjct: 175 LKG----TKVTFCPDFDHFEGYMMDNSVLDIVHDRLQSLSVIFPK-ITFKFNGKRI-VSK 228

Query: 267 FAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVA 326
           F +Y  +Y        ++      +     EG F+ VSF NG+ T  GGTHVDYV + + 
Sbjct: 229 FKDYAKLYNDDPFVIEDKNFSLALVPAVEGEG-FKSVSFANGLFTKNGGTHVDYVTDDLC 287

Query: 327 NHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELS 386
             ++  + K+ K    KA        + +   + N  FDSQTKE LT          +L 
Sbjct: 288 EEIVKRIKKEYKVDVTKAAVKSGLTCILIVRELPNLRFDSQTKERLTNPTGDIKRHIDLD 347

Query: 387 EEFLKKVTA-KSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED--ANLAGGRNS 443
            + L KV A K  I+  +++    ++    K       +  +     +   ANL G    
Sbjct: 348 FKKLAKVIAKKENIIMPIIAVVLARKEAADKAAATKAAKAAKRAKVAKHVKANLIG--TD 405

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKK 503
            + TL LTEGDSA       +SV  +D  G FPLRGK L   E    +++ N+EI NI  
Sbjct: 406 AETTLFLTEGDSAINYL---ISVRDQDLHGGFPLRGKTLTTWEQPEAKIVKNAEIFNIMA 462

Query: 504 ILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDG- 562
           I GL+ GV+   ++ ++Y ++ IMTD                             D DG 
Sbjct: 463 ITGLQFGVD--ALEVMQYKNIAIMTD----------------------------ADTDGI 492

Query: 563 SHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNG-KVLSFYSMPDYEAWKESL 620
             IK  LI+F    WP L +     + FI TPI+ A  K G  V  +Y + D+E  ++++
Sbjct: 493 GSIKPSLISFFAR-WPELFE--DGRIRFIKTPIIIAEPKKGDDVRWYYDLEDFENDRDNI 549

Query: 621 GGNASSWSIKYYKGLGTSTSKE 642
            G    +SI+Y KGL + T  +
Sbjct: 550 KG----YSIRYIKGLASLTESD 567


>gi|406718745|emb|CCL97470.1| protein of unknown function [Enterobacteria phage RB43]
          Length = 624

 Score =  188 bits (478), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 191/659 (28%), Positives = 299/659 (45%), Gaps = 77/659 (11%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S  +HI  RP+ Y+GS+ +     +I  +       R + YV GL KI +EIL N+ D  
Sbjct: 25  SDRDHIRKRPNMYVGSVNREAHERFIMGK------FRKVEYVEGLVKIINEILDNSIDEA 78

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVPV-EIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A ++ +  +H+L+++ ++G G+P  ++   EG  VP+ +    +  + SN+DD
Sbjct: 79  IRTDFKFANRIEVKIDHNLVTISDNGRGIPQDDVRTPEGKIVPKPVAAWTMAKSGSNFDD 138

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
              + T G NG G+ LTN +S+ FI ET++GKR     +V  N        +       +
Sbjct: 139 E-NRVTMGMNGVGSFLTNCYSSIFIGETSNGKR-----KVTINCTDGAQNMDYRTSPTKE 192

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T V F PD + F +  ++++   ++K R++ LA     SVK   NG  +P K FA Y 
Sbjct: 193 QGTTVKFTPDFSIFGVDGIDEETKEVIKDRLMALAVAF-PSVKFTYNGETLPNK-FAMYG 250

Query: 272 DMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
            MY  S      + N +    +  +E  F+Q SFVNG+ T  GG HVD + + +   +  
Sbjct: 251 AMYGDSTI---TQTNNKISFILASTEDGFKQKSFVNGLDTKNGGVHVDCMIDGIYAELEP 307

Query: 332 VVNKKNKNANVKAHNVKNHLW--VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELS-EE 388
           ++ KK+     KA  VK  L   VF++   + PAFDSQTKE LT     F +   L+ ++
Sbjct: 308 MIKKKHAIEIPKAR-VKECLTLVVFLHNF-NAPAFDSQTKEKLTNTAGEFNNHAGLNYKK 365

Query: 389 FLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG-GRNSEQCT 447
             K++   S I+  ++  A  ++            +  +     +    +G   +  + T
Sbjct: 366 IAKQIMDTSEIITPIIESALIRKQAAEAAAITKAKKKAKKAKIAKHVPASGIDTDGVETT 425

Query: 448 LILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGL 507
           L LTEGDSA       +     +  G FPLRGK LN    S   +L N E+  +  IL L
Sbjct: 426 LFLTEGDSAVG---QFIECRNEETQGAFPLRGKPLNTWGMSFTDILKNKELFELMAILNL 482

Query: 508 KQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKG 567
             G    +   + Y ++ IM D                             D DG  I  
Sbjct: 483 HPG----DSSEMAYDNIGIMVD----------------------------ADVDGGDILT 510

Query: 568 LLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLS-FYSMPDYEAWKESLGGNAS 625
           LLI F  S WP L +     + +I TPI+ A  K GK    FYSM D+  +++       
Sbjct: 511 LLIAFF-SRWPELFEKKK--IRYIRTPIIIA--KIGKDEKWFYSMDDFVPFRD------K 559

Query: 626 SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
           +  ++Y KGLG S  K   +      L     V  DD   + +EL F ++  + RK W+
Sbjct: 560 AKEVRYIKGLG-SLRKSDYDRVLGDQLKYDTIVLGDDYK-DVLELCFGEES-DPRKDWV 615


>gi|66391456|ref|YP_238981.1| DNA-dependent ATPase [Enterobacteria phage RB43]
 gi|62288544|gb|AAX78527.1| gp60plus39 DNA topoisomerase subunit [Enterobacteria phage RB43]
 gi|415434013|emb|CCK73853.1| protein of unknown function [Enterobacteria phage RB43]
          Length = 630

 Score =  188 bits (478), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 191/659 (28%), Positives = 299/659 (45%), Gaps = 77/659 (11%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S  +HI  RP+ Y+GS+ +     +I  +       R + YV GL KI +EIL N+ D  
Sbjct: 31  SDRDHIRKRPNMYVGSVNREAHERFIMGK------FRKVEYVEGLVKIINEILDNSIDEA 84

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVPV-EIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A ++ +  +H+L+++ ++G G+P  ++   EG  VP+ +    +  + SN+DD
Sbjct: 85  IRTDFKFANRIEVKIDHNLVTISDNGRGIPQDDVRTPEGKIVPKPVAAWTMAKSGSNFDD 144

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
              + T G NG G+ LTN +S+ FI ET++GKR     +V  N        +       +
Sbjct: 145 E-NRVTMGMNGVGSFLTNCYSSIFIGETSNGKR-----KVTINCTDGAQNMDYRTSPTKE 198

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T V F PD + F +  ++++   ++K R++ LA     SVK   NG  +P K FA Y 
Sbjct: 199 QGTTVKFTPDFSIFGVDGIDEETKEVIKDRLMALAVAF-PSVKFTYNGETLPNK-FAMYG 256

Query: 272 DMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
            MY  S      + N +    +  +E  F+Q SFVNG+ T  GG HVD + + +   +  
Sbjct: 257 AMYGDSTI---TQTNNKISFILASTEDGFKQKSFVNGLDTKNGGVHVDCMIDGIYAELEP 313

Query: 332 VVNKKNKNANVKAHNVKNHLW--VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELS-EE 388
           ++ KK+     KA  VK  L   VF++   + PAFDSQTKE LT     F +   L+ ++
Sbjct: 314 MIKKKHAIEIPKAR-VKECLTLVVFLHNF-NAPAFDSQTKEKLTNTAGEFNNHAGLNYKK 371

Query: 389 FLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG-GRNSEQCT 447
             K++   S I+  ++  A  ++            +  +     +    +G   +  + T
Sbjct: 372 IAKQIMDTSEIITPIIESALIRKQAAEAAAITKAKKKAKKAKIAKHVPASGIDTDGVETT 431

Query: 448 LILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGL 507
           L LTEGDSA       +     +  G FPLRGK LN    S   +L N E+  +  IL L
Sbjct: 432 LFLTEGDSAVG---QFIECRNEETQGAFPLRGKPLNTWGMSFTDILKNKELFELMAILNL 488

Query: 508 KQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKG 567
             G    +   + Y ++ IM D                             D DG  I  
Sbjct: 489 HPG----DSSEMAYDNIGIMVD----------------------------ADVDGGDILT 516

Query: 568 LLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLS-FYSMPDYEAWKESLGGNAS 625
           LLI F  S WP L +     + +I TPI+ A  K GK    FYSM D+  +++       
Sbjct: 517 LLIAFF-SRWPELFEKKK--IRYIRTPIIIA--KIGKDEKWFYSMDDFVPFRD------K 565

Query: 626 SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
           +  ++Y KGLG S  K   +      L     V  DD   + +EL F ++  + RK W+
Sbjct: 566 AKEVRYIKGLG-SLRKSDYDRVLGDQLKYDTIVLGDDYK-DVLELCFGEES-DPRKDWV 621


>gi|423262099|ref|YP_007010698.1| DNA topoisomerase II large subunit [Aeromonas phage Aes508]
 gi|402761977|gb|AFQ97091.1| DNA topoisomerase II large subunit [Aeromonas phage Aes508]
          Length = 607

 Score =  188 bits (478), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 186/671 (27%), Positives = 294/671 (43%), Gaps = 97/671 (14%)

Query: 38  EHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRD 97
           EH++LRP+ Y+GS+       +++ +      ++++SYVPGL KI DEI+ N+ D   R 
Sbjct: 12  EHVILRPNMYVGSVAYEPHERFLFGK------YQSVSYVPGLVKIIDEIIDNSVDEGIRT 65

Query: 98  PKMDAVKVVIDQEHDL----ISVHNSGDGVPVEIHQEEGVYVPELI--FGHLLTSSNYDD 151
               A K  ID   DL    ++V ++G G+P  +       +P+ +  +   +  SN+DD
Sbjct: 66  DFKFANK--IDIRFDLLEGSVTVVDNGRGIPQSLVNTPDGEMPKPVAAWTQTMAGSNFDD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
              + + G NG G+ LTN FS  FI ET DGK                       C +G 
Sbjct: 124 T-NRVSMGMNGVGSSLTNFFSKTFIGETCDGKNFLTVT-----------------CSDGA 165

Query: 212 ---NW---------TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
              NW         T V F PD   F    ++  +V ++  R+  L+    K +K  +NG
Sbjct: 166 SQVNWETKPGKIKGTSVYFIPDEKHFEGKTIDQQIVDIISDRITALSVVFPK-IKFTING 224

Query: 260 HRVPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
               +K FAEY  M+           N+ + I +  S   F+QVS+VNG+    GG+H+D
Sbjct: 225 EVASMK-FAEYAKMFGDESLILE---NDNFSIAICNSPEGFRQVSYVNGLNIKNGGSHID 280

Query: 320 YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
           Y+ + +++ ++  + +K+K    KA   +    + V   + N  FDSQTKE LT      
Sbjct: 281 YLIDGISDELIPSIKRKHKIEISKARIKECLTMIVVVRGMSNLRFDSQTKERLTNPLGEV 340

Query: 380 GSKCELSEEFL-KKVTAKSGIVETLLSWANFKQ-SKDLKKNDGTKTEDVRGISKLEDANL 437
            S  EL  + L K++     I+  ++  A  +  + +       +    +          
Sbjct: 341 KSHIELDFKKLGKQIMNNDAILMPIIEAALARHLAAEKAALTKAQKAAAKTKVAKHIKAG 400

Query: 438 AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
           + G  S++ TL LTEGDSA       LSV   +  G + LRGK++N      + VL N E
Sbjct: 401 SWGDISKETTLFLTEGDSAIGYL---LSVRDSELHGGYALRGKVMNTWGMKGSDVLKNRE 457

Query: 498 IGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLA 557
           + +I  I+GL      ++V++ +Y ++ IMTD                            
Sbjct: 458 LADICAIMGLDLA-NPDDVENRKYKNVAIMTDA--------------------------D 490

Query: 558 QDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWK 617
            D  GS    LL  F  S WP L  +    V F+   V   +K  +   FY++ +++A K
Sbjct: 491 PDGQGSIYPCLLAFF--SRWPKLYDLGC--VRFVKTPVVILSKGKQTKWFYTITEFDAQK 546

Query: 618 ESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFV--WEDDQDGEAIELAFSKK 675
           E   G    W ++Y KGLG+    E  E   N      D    WE     E  E+    +
Sbjct: 547 EKYKG----WELRYIKGLGSLREHEYSEVVNNPQYDIVDLGPDWE-----ELFEMLLGDE 597

Query: 676 KIEARKKWLLQ 686
             E RK+W+ Q
Sbjct: 598 A-ELRKQWMSQ 607


>gi|238694884|ref|YP_002922078.1| topoisomerase II large subunit [Enterobacteria phage JSE]
 gi|220029020|gb|ACL77955.1| topoisomerase II large subunit [Enterobacteria phage JSE]
          Length = 607

 Score =  188 bits (477), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 197/668 (29%), Positives = 307/668 (45%), Gaps = 80/668 (11%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR--TISYVPGLYKIFDEILV 88
           ++  S  EH+L R   YIGS          YEE  + +  +   ISYVPGL KI DEI+ 
Sbjct: 4   FRILSDREHVLKRAGMYIGSTT--------YEEHQRFLFGKWTKISYVPGLVKIIDEIID 55

Query: 89  NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE-IHQEEGVYVPELIFGHLLT-- 145
           N+ D   R     A  + +D ++++++V ++G G+P   +   EG  +P+ +     T  
Sbjct: 56  NSVDEAIRTNFEFANVISVDIQNNIVTVTDNGRGIPQHMVTTPEGTQIPQPVAAWTRTKA 115

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTN---NMGKKSEP 202
            SN+DD   + T G NG G+ L+N FS  F   T DG+     +   TN   N+   S+P
Sbjct: 116 GSNFDDT-NRLTQGMNGVGSSLSNFFSDWFTGVTCDGETEMTVQC--TNGAENITWSSKP 172

Query: 203 NISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
             SK K     TKV+F PD   F    +++ V+ ++  R+  L+    K +  + NG R+
Sbjct: 173 --SKLKG----TKVTFCPDFDHFEGYMMDNSVLDIVHDRLQSLSVIFPK-ITFKFNGKRI 225

Query: 263 PVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVA 322
            V  F +Y  +Y        ++      +     EG F+ VSF NG+ T  GGTHVDYV 
Sbjct: 226 -VSKFKDYAKLYNDDPFVIEDKNFSLALVPAVEGEG-FKSVSFANGLFTKNGGTHVDYVT 283

Query: 323 NQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSK 382
           + +   ++  + K+ K    KA        + +   + N  FDSQTKE LT         
Sbjct: 284 DDLCEEIVKRIKKEYKVDVTKAAVKSGLTCILIVRELPNLRFDSQTKERLTNPTGDIKRH 343

Query: 383 CELSEEFLKKVTA-KSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED--ANLAG 439
            +L  + L KV A K  I+  +++    ++    K       +  +     +   ANL G
Sbjct: 344 IDLDFKKLAKVIAKKENIIMPIIAVVLARKEAADKAAATKAAKAAKRAKVAKHVKANLIG 403

Query: 440 GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
                + TL LTEGDSA       +SV  +D  G FPLRGK L   E    +++ N+EI 
Sbjct: 404 --TDAETTLFLTEGDSAINYL---ISVRDQDLHGGFPLRGKTLTTWEQPEAKIVKNAEIF 458

Query: 500 NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
           NI  I GL+ GV+   ++ ++Y ++ IMTD                             D
Sbjct: 459 NIMAITGLQFGVD--ALEVMQYKNIAIMTD----------------------------AD 488

Query: 560 HDG-SHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNG-KVLSFYSMPDYEAW 616
            DG   IK  LI+F    WP L +     + FI TPI+ A  K G  V  +Y + D+E  
Sbjct: 489 TDGIGSIKPSLISFFAR-WPELFE--DGRIRFIKTPIIIAEPKKGDDVRWYYDLEDFEND 545

Query: 617 KESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKK 676
           ++++ G    ++I+Y KGL + T     +Y + I     + +   +   E  +L +S+  
Sbjct: 546 RDNIKG----YNIRYIKGLASLTE---SDYHRVINDPVMEIITLPENYKELFDLLYSEDS 598

Query: 677 IEARKKWL 684
            + RK W+
Sbjct: 599 -DMRKAWM 605


>gi|428175992|gb|EKX44879.1| hypothetical protein GUITHDRAFT_139486 [Guillardia theta CCMP2712]
          Length = 1166

 Score =  187 bits (476), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 166/611 (27%), Positives = 256/611 (41%), Gaps = 165/611 (27%)

Query: 100 MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVK-KTTG 158
           M  ++V ID     I+V N G G+   +H+     +PE+ FG  + S+N+DDN + + TG
Sbjct: 1   MREIRVSIDAATGKITVWNDGPGIEPVMHKSGKGLIPEVAFGEFMASTNFDDNTRQRFTG 60

Query: 159 GRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSF 218
           GR G GAK TN +S EF ++T   K   +Y+Q +T+NM  K+                  
Sbjct: 61  GRFGVGAKATNAWSKEFTVKTFHAKSGVEYEQTWTDNMLHKT------------------ 102

Query: 219 KPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSV 278
           KP +A  N+               VDL       ++++L  H  P K     +   P S 
Sbjct: 103 KPKVAMINL--------------YVDL-----NVIEIQLVNHE-PAKKGWTCISWIPVS- 141

Query: 279 TRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNK 338
                            S    +    VNG+   +G TH++++  ++++ ++    K+ K
Sbjct: 142 -----------------SSATLEARGIVNGVLCSQG-THIEHLVTKISDGLVQRAIKQQK 183

Query: 339 NANVKAHNVKNHL-------------------WVFVNALIDNPAFDSQTKETLTLRQSSF 379
              +K  + K  L                   + F   LI       QTKE LTL    +
Sbjct: 184 RDKLKLDDSKTGLAKMKNYFRQHMAIIGLVQFFRFSQTLILGCNGFDQTKEKLTLNPKEW 243

Query: 380 GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG 439
           G    + E+ ++++    G+V+ +L  A  +    L K  G                 A 
Sbjct: 244 GFPATIDEKLVERIDRHLGLVDKVLMEAEARNLAALSKKAGG----------------AP 287

Query: 440 GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN-----QVLN 494
           G ++        EGDSAK LA+AG+ +VGRD +GV PLRG + NVR A  N       L 
Sbjct: 288 GASARVSIAKYQEGDSAKDLAVAGMEIVGRDCYGVIPLRGVIRNVRPAKVNAKVLKDFLK 347

Query: 495 NSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
           N+E+  I K+LGL+ GVEY   N  + LRY H +I  DQ                     
Sbjct: 348 NAELAAINKVLGLQFGVEYTPENVHRLLRYDHFVIFCDQ--------------------- 386

Query: 552 FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVKATNKNGKVLSFYSM 610
                  D DG+HI G LIN+    +PSLLK  P FL+   TPI++  +++G       M
Sbjct: 387 -------DPDGAHIAGELINYFTIMFPSLLKAKPDFLMRLGTPIIRLKSRSG-------M 432

Query: 611 PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
            D+E                             K  ++N+  H    +++D +D E ++ 
Sbjct: 433 TDHEL----------------------------KSKYKNLDDHLVPILYKDQEDDEVVDK 464

Query: 671 AFSKKKIEARK 681
            F K + +ARK
Sbjct: 465 WFRKNRADARK 475



 Score =  162 bits (411), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 78/171 (45%), Positives = 107/171 (62%), Gaps = 19/171 (11%)

Query: 734 RKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQP 793
           RK+++ + KR F    KV QF+G V E +AYHHG+ +L   I+ MA+ F GSNNINLL P
Sbjct: 474 RKVMYTAIKRKFKDPIKVVQFAGAVLETAAYHHGDAALQGAIIAMARRFCGSNNINLLHP 533

Query: 794 NGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLL----------------DYLN 837
           +GQFG+R+     A +ARYI   L  ITR +F  +DD +L                +Y N
Sbjct: 534 DGQFGSRHSN--HAGAARYISAGLEKITRSIFRPEDDPILVVKLHCDYSSMRRLCQEYQN 591

Query: 838 EDGQQIEPTWYMPIIPTVLVNGSE-GIGTGWSSYIPNYNPRDIVANVRRLL 887
           EDGQ IEP +++P++P  L+NG E GI  GWSS++P YNPRD++  +R  L
Sbjct: 592 EDGQVIEPKYFLPVVPMALINGCEAGIAVGWSSFVPMYNPRDVLNWLRERL 642


>gi|66391811|ref|YP_238736.1| gp60plus39 [Aeromonas phage 31]
 gi|62114648|gb|AAX63496.1| gp60plus39 [Aeromonas phage 31]
          Length = 607

 Score =  187 bits (476), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 187/659 (28%), Positives = 297/659 (45%), Gaps = 73/659 (11%)

Query: 38  EHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRD 97
           EH++LRP+ Y+GS+       +++ +       +++SYVPGL KI DEI+ N+ D   R 
Sbjct: 12  EHVILRPNMYVGSVAYEPHERFLFGK------FQSVSYVPGLVKIIDEIIDNSVDEGIRT 65

Query: 98  PKMDAVKVVIDQEHDL----ISVHNSGDGVPVEIHQEEGVYVPELI--FGHLLTSSNYDD 151
               A K  ID   DL    ++V ++G G+P  + +     +P+ +  +   +  SN+DD
Sbjct: 66  DFKFANK--IDIRFDLLEGSVTVVDNGRGIPQSMVETPDGEMPKPVAAWTQTMAGSNFDD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR-LKKYKQVFTNNMGKKSEPNISKCKEG 210
              + + G NG G+ LTN FS +FI ET DGK  L        +N+  K++P  +K    
Sbjct: 124 -TNRVSMGMNGVGSSLTNFFSKKFIGETCDGKNFLTVTCSEGASNIDWKTKPGKTKG--- 179

Query: 211 DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
              T V F PD   F    ++  ++ ++  R+  L+  +   +K  +NG    +K FA+Y
Sbjct: 180 ---TSVYFIPDEKHFEGRTIDQQIIDIISDRITALS-VVFPQIKFTINGQIASMK-FADY 234

Query: 271 VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
             M+           ++R+ I +  S   F+QVS+VNG+    GG+H+DY+ + ++  +M
Sbjct: 235 AKMFGDESLIVE---SDRFSIAICNSPEGFRQVSYVNGLNIKNGGSHIDYLVDGISEELM 291

Query: 331 AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELS-EEF 389
             + KK+K    KA   +    V V   + N  FDSQTKE LT       S  +L  ++ 
Sbjct: 292 PAIKKKHKIEISKARVKECLTMVVVVRGMSNLRFDSQTKERLTNPAGEVKSHFDLDFKKL 351

Query: 390 LKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG--GRNSEQCT 447
            K++     I++ ++  A   +    +K   TK +     +       AG  GRN  + T
Sbjct: 352 SKQIMNTDAILQPIIE-AALARHLAAEKAAMTKAQKAAAKTNCAKHIKAGEWGRNDIETT 410

Query: 448 LILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGL 507
           L LTEG+SA       L V   +  G + LRGK++N      + VL N+E+ +I  I GL
Sbjct: 411 LFLTEGESAIGYL---LKVKDENLHGGYALRGKVMNTWGMKGSDVLKNNELSDICAITGL 467

Query: 508 KQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKG 567
                 +++   +Y ++ IMTD                             D  GS    
Sbjct: 468 DLA-NPDDISQRKYKNIAIMTDA--------------------------DPDGQGSIYPC 500

Query: 568 LLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSW 627
           LL  F    WP L    S  V F+   V   NK   +  FY++ ++E  K+   G    W
Sbjct: 501 LLAFFAR--WPKLFDEGS--VRFVKTPVVILNKGKNIKWFYTLTEFEKEKKDYKG----W 552

Query: 628 SIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            ++Y KGLG+    E  E   N      D V   D   E  E+         RK+W+ Q
Sbjct: 553 DLRYIKGLGSLREHEYSEVVNNPNY---DIVDLGDDWEELFEMLLGDDA-ALRKEWMSQ 607


>gi|33620688|ref|NP_891577.1| topoisomerase II large subunit [Enterobacteria phage RB49]
 gi|33438558|gb|AAL15132.2| topoisomerase II large subunit [Enterobacteria phage RB49]
          Length = 607

 Score =  186 bits (473), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 197/668 (29%), Positives = 306/668 (45%), Gaps = 80/668 (11%)

Query: 31  YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHR--TISYVPGLYKIFDEILV 88
           ++  S  EH+L R   YIGS          YEE  + +  +   ISYVPGL KI DEI+ 
Sbjct: 4   FRILSDREHVLKRAGMYIGSTT--------YEEHQRFLFGKWTKISYVPGLVKIIDEIID 55

Query: 89  NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE-IHQEEGVYVPELIFGHLLT-- 145
           N+ D   R     A  + +D ++++++V ++G G+P   +   EG  +P+ +     T  
Sbjct: 56  NSVDEAIRTNFEFANVISVDIQNNIVTVTDNGRGIPQHMVTTPEGTQIPQPVAAWTRTKA 115

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTN---NMGKKSEP 202
            SN+DD   + T G NG G+ L+N FS  F   T DG+     +   TN   N+   S+P
Sbjct: 116 GSNFDDT-NRLTQGMNGVGSSLSNFFSDWFTGVTCDGETEMTVQC--TNGAENITWSSKP 172

Query: 203 NISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV 262
             SK K     T V+F PD   F    +++ V+ ++  R+  L+    K +  + NG R+
Sbjct: 173 --SKLKG----TNVTFCPDFDHFEGYMMDNSVLDIVHDRLQSLSVIFPK-ITFKFNGKRI 225

Query: 263 PVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVA 322
            V  F +Y  +Y        ++      +     EG F+ VSF NG+ T  GGTHVDYV 
Sbjct: 226 -VSKFKDYAKLYNDDPFVIEDKNFSLALVPAVEGEG-FKSVSFANGLFTKNGGTHVDYVT 283

Query: 323 NQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSK 382
           + +   ++  + K+ K    KA        + +   + N  FDSQTKE LT         
Sbjct: 284 DDLCEEIVKRIKKEYKVDVTKAAVKSGLTCILIVRELPNLRFDSQTKERLTNPTGDIKRH 343

Query: 383 CELSEEFLKKVTA-KSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED--ANLAG 439
            +L  + L KV A K  I+  +++    ++    K       +  +     +   ANL G
Sbjct: 344 IDLDFKKLAKVIAKKENIIMPIIAVVLARKEAADKAAATKAAKAAKRAKVAKHVKANLIG 403

Query: 440 GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIG 499
                + TL LTEGDSA       +SV  +D  G FPLRGK L   E    +++ N+EI 
Sbjct: 404 --TDAETTLFLTEGDSAINYL---ISVRDQDLHGGFPLRGKTLTTWEQPEAKIVKNAEIF 458

Query: 500 NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
           NI  I GL+ GV+  +V  ++Y ++ IMTD                             D
Sbjct: 459 NIMAITGLQFGVDALDV--MQYKNIAIMTD----------------------------AD 488

Query: 560 HDG-SHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNG-KVLSFYSMPDYEAW 616
            DG   IK  LI+F    WP L +     + FI TPI+ A  K G  V  +Y + D+E  
Sbjct: 489 TDGIGSIKPSLISFFAR-WPELFE--DGRIRFIKTPIIIAEPKKGDDVRWYYDLEDFEND 545

Query: 617 KESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKK 676
           ++++ G    ++I+Y KGL + T     +Y + I     + +   +   E  +L +S+  
Sbjct: 546 RDNIKG----YNIRYIKGLASLTE---SDYHRVINDPVMEIITLPENYKELFDLLYSEDA 598

Query: 677 IEARKKWL 684
            + RK W+
Sbjct: 599 -DQRKIWM 605


>gi|440789458|ref|YP_007349168.1| DNA topoisomerase II medium subunit [Serratia phage phiMAM1]
 gi|425702497|gb|AFX93657.1| DNA topoisomerase II medium subunit [Serratia phage phiMAM1]
          Length = 461

 Score =  186 bits (472), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 255/491 (51%), Gaps = 53/491 (10%)

Query: 703  SDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHS 762
            +DFVN E   FS+ +  R IPS++DGLKP QRK+LF + +  + KE  V + + + +  +
Sbjct: 10   TDFVNHEHKEFSVVNSIRQIPSIIDGLKPSQRKVLFSAIE--YGKEELVDRLAMFSAART 67

Query: 763  AYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITR 822
            AY  G  +L+  ++ MA+ F G+NNI     +GQFG+     K+AAS RYI   +S +  
Sbjct: 68   AYKSGGDNLSGVVVNMARGFQGTNNIPYFDRDGQFGS--IVSKEAASVRYISVSVSKVIS 125

Query: 823  FLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVAN 882
             +F K+D+ +L++     ++++P +++P++P +L+NG   IG+G++S IPN++ + ++  
Sbjct: 126  AIFKKEDNDILEHYYLGDEKMDPKFFLPVLPMILINGVSAIGSGYASDIPNHSVKSVINA 185

Query: 883  VRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRW 942
            ++ LL+G    P+ P Y GF G    +     G  Y V G+ + +N TTL+I ++P  ++
Sbjct: 186  LKCLLDGREHTPLIPHYEGFTGV---SQYDSEGRVY-VEGVYQLINATTLKITDVPPGKF 241

Query: 943  TQDYR-----------EFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEG 991
            ++ Y              +E I D N+  + G+     D TV F     +  ++ +    
Sbjct: 242  SKTYEMKYLLPLVKDGTVIEYINDTNE--LNGW-----DITVQF-----KRGVLSSMSPD 289

Query: 992  LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
             +++     T ++S +  +D  G I+ Y + ++IL +FF+ RL  YE R++  + ++  +
Sbjct: 290  EIREMLGLVTRTSSTLVAWDENGYIRPYASVDEILIDFFNYRLSRYEDRRQHMMASIRSK 349

Query: 1052 LLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ-KGFTPFPKNSKSIEAVVAGATDET 1110
            + +L+ K+R  +G +           TDL  ++ + K +     N   I   ++   D  
Sbjct: 350  MAELD-KMRMFIGFITN---------TDLNKDISELKSYFLDNYNLYHIRDTISLHCDSM 399

Query: 1111 EESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLW 1170
              +E            D D +  +++ +++L+  + L A   ++ +++  L   T   L+
Sbjct: 400  SMTEA-----------DVDRMFKISLSSISLDARERLSARLQEMLKQLQTLENQTDVDLY 448

Query: 1171 VKDLDALDMQL 1181
             +D+  ++ +L
Sbjct: 449  KEDIKIVEKEL 459


>gi|402585403|gb|EJW79343.1| hypothetical protein WUBG_09749, partial [Wuchereria bancrofti]
          Length = 196

 Score =  186 bits (471), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 88/133 (66%), Positives = 113/133 (84%), Gaps = 1/133 (0%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQA-LWIYEEESKTMIHRTISYVPGLYKIFD 84
           +IE++YQKKSQLEHILLRPDTYIGS+E+  +A LW+Y+ E++ ++ R ISYVPGLYKIFD
Sbjct: 64  SIEKIYQKKSQLEHILLRPDTYIGSVERTDKAPLWVYDAEAERIVQRDISYVPGLYKIFD 123

Query: 85  EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
           EILVNAADNKQRD KM+ +K+ I++E + ISV N+G G+PV +H+ E +YVPELIFG LL
Sbjct: 124 EILVNAADNKQRDSKMNLIKININKETNEISVFNNGKGIPVVLHKVEQLYVPELIFGTLL 183

Query: 145 TSSNYDDNVKKTT 157
           TSSNYDD+ +K T
Sbjct: 184 TSSNYDDSERKVT 196


>gi|392973025|ref|YP_006488983.1| gp60plus39 DNA topoisomerase subunit [Acinetobacter phage ZZ1]
 gi|390058166|gb|AFL47620.1| gp60plus39 DNA topoisomerase subunit [Acinetobacter phage ZZ1]
          Length = 608

 Score =  185 bits (470), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 190/667 (28%), Positives = 310/667 (46%), Gaps = 87/667 (13%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S  EH+L RP  Y+GS        +++ + +K      + YVP + K+ +EI  N+ D  
Sbjct: 10  SDKEHVLKRPGMYVGSTSNEEYDRFLFGKFTK------LKYVPAIVKLIEEIRDNSIDEA 63

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLLTSS--NYDD 151
            R     A K+ +  + + ++V ++G G+P   I   EG  +P  +     T +  N+ D
Sbjct: 64  VRTNFQYANKIAVTIKDNWVTVTDNGRGIPQAMITTPEGTEIPGAVAAWTRTKAGGNFGD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKK--SEPNISKCKE 209
           + ++ T G NG G+ LTNIFS EFI  T DG++      V  NNM     ++   +K  +
Sbjct: 124 DSERKTSGMNGVGSSLTNIFSKEFIGTTCDGEQTLIVHCV--NNMDNIDWTQKVYAKQTQ 181

Query: 210 GDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAE 269
           G   T+V F PD + F    ++D +V +++ ++  LA  +   ++ + NG +V   +F +
Sbjct: 182 G---TEVKFTPDFSHFECDAIDDVIVQIIEDQMQTLA-VVYPEIEFKFNGKKVQ-GNFKK 236

Query: 270 YVDMYPKS-VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANH 328
           Y   Y +S +T   + V    +  +  SE  F+ +S+VN I T  GG+H+DYV +++AN 
Sbjct: 237 YAKQYDESAITAETDNV----QFAIGRSEDGFRHLSYVNAIHTKVGGSHLDYVMDELANE 292

Query: 329 VMAVVNKKNKNANVKAHNVKNHLWVFVNAL-IDNPAFDSQTKETLTLRQSSFGSKCE--- 384
           ++  + +K K  +V    +K  + V +    + N  FDSQTKE LT       S  +   
Sbjct: 293 LIPSIKRKYK-IDVNKARIKECVTVLLFLKDMKNLRFDSQTKERLTSPAGEVKSHIDIDI 351

Query: 385 --LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
             ++++F+        I+E +L  A    ++   +    K      +SK   AN   G +
Sbjct: 352 KKIAKQFMANEDILMPIIEAVL--ARKLAAEKAAETKANKAAAKAKVSKHIKAN-GYGND 408

Query: 443 SEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIK 502
            ++ TL LTEGDSA       +S   R+  G +PLRGK+LN    S+  +L N EI +I 
Sbjct: 409 QKETTLFLTEGDSAIGYL---ISTRNRELHGGYPLRGKVLNTWGLSATDMLKNKEIFDIC 465

Query: 503 KILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDG 562
            I+GL  G       SL Y ++ IMTD  +                          D  G
Sbjct: 466 AIMGLTIG---EKADSLNYRNVAIMTDADV--------------------------DGTG 496

Query: 563 SHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGG 622
           S    LL  F  S WP L +     ++F+   V    K      +Y+  +Y+A K+SL G
Sbjct: 497 SIYPSLLAFF--SNWPELFEQGR--IKFVKTPVWICQKGKDQKWYYTSEEYDADKDSLKG 552

Query: 623 NASSWSIKYYKGLGTSTSKE-----GKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKI 677
               ++ +Y KGLG+    E      + YF+ + L +    WE        E+   K   
Sbjct: 553 ----YTCRYIKGLGSLEESEYERVINEPYFEVVKLPES---WE-----TQFEMLLGKNA- 599

Query: 678 EARKKWL 684
           E RK+W+
Sbjct: 600 ELRKEWM 606


>gi|70935391|ref|XP_738786.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56515284|emb|CAH87760.1| hypothetical protein PC302631.00.0 [Plasmodium chabaudi chabaudi]
          Length = 408

 Score =  185 bits (470), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 88/159 (55%), Positives = 115/159 (72%), Gaps = 3/159 (1%)

Query: 116 VHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEF 175
           V+N G+G+PV+IH+E  +YVP +IFG LLTS NYDD   + TGGRNG+GAKLTNIFS EF
Sbjct: 1   VYNDGEGIPVDIHKEMNIYVPHMIFGELLTSDNYDDAEDRITGGRNGFGAKLTNIFSKEF 60

Query: 176 IIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVV 235
            ++  D  R +++K  ++ NM K SEP+I K   G ++ KV+FKPDL KF MT L+DD+ 
Sbjct: 61  TVQCGDNSRKREFKMTWSQNMSKFSEPHI-KNYNGKDYVKVTFKPDLDKFGMTELDDDIE 119

Query: 236 ALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY 274
            L+ KRV DLAG    +V+V LNG R+PVK F  YVD+Y
Sbjct: 120 CLLHKRVYDLAGTC--NVRVYLNGSRLPVKDFKSYVDLY 156



 Score =  177 bits (448), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 94/188 (50%), Positives = 125/188 (66%), Gaps = 8/188 (4%)

Query: 274 YPKSVTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAV 332
           Y + + + HE+   RWEI ++ ++G QFQQVSFVN I T KGGTHV Y+ +Q+ N +   
Sbjct: 223 YEEEIVKIHEK-QHRWEIVISKTDGSQFQQVSFVNSICTTKGGTHVSYIVDQLLNSLSKK 281

Query: 333 VNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLK 391
            N KNK    +K+ +++NHLWVFVN LI NP FDSQTKETLT +Q+ FGSKC L+++ + 
Sbjct: 282 ANAKNKGGMEIKSGHIRNHLWVFVNCLIVNPTFDSQTKETLTTKQAKFGSKCILTDKTIN 341

Query: 392 KVTAKSGIVETLLSWANFKQSKDLKK----NDGTKTEDVRGISKLEDANLAGGRNSEQCT 447
            V  KS I+  +L WA  K   +L+K          E + GI KLEDAN AG + S++CT
Sbjct: 342 NV-LKSSILSNILLWAQAKAQVELRKKMKAGSSKARERIIGIPKLEDANDAGSKYSQECT 400

Query: 448 LILTEGDS 455
           LILTEGDS
Sbjct: 401 LILTEGDS 408


>gi|338224626|gb|AEI88223.1| gp39 topoisomerase II [Campylobacter phage vB_CcoM-IBB_35]
          Length = 503

 Score =  183 bits (465), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 252/501 (50%), Gaps = 31/501 (6%)

Query: 30  MYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVN 89
           M +K +  EHIL RP  YIG+I+      +I E  S  + + T++YVPGL KI +EI+ N
Sbjct: 1   MIKKLTDREHILKRPSMYIGAIDSTNTEDFIIE--SGKIKYTTLNYVPGLIKIINEIIDN 58

Query: 90  AADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
           + D   R      + + +   +D +S+ + G G+PV    +   Y+PEL + H    SN+
Sbjct: 59  SVDAAIRSKFKSGLNISVKISNDTVSIEDDGTGIPVIKSGDH--YMPELAWNHAKAGSNF 116

Query: 150 DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
           DD+  + T G NG G+  TN++ST F   T DGK    +K   + N  +    NI   K+
Sbjct: 117 DDDANRITIGTNGVGSYCTNVWSTNFKGITDDGKNRYIFK---SKNNAETYSANIEASKK 173

Query: 210 GDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAE 269
               T V FKPDL +FN+  +++    ++ +R+++LA C  + +  + N  ++  KSF  
Sbjct: 174 SG--TLVEFKPDLERFNLKEIDETHKNIIYQRLLNLAICYPE-INFKFNSKKIDFKSFKN 230

Query: 270 YVDMYPKSVTRFHERVNERWEICVTLSE-GQFQQVSFVNGIATIKGGTHVDYVANQVANH 328
           Y++M+    + F    N+  +I +  +E   F+Q SFVNG+    GG H+D + N V   
Sbjct: 231 YLNMFS---SNFELYENQNIKIGIIPNELDDFKQFSFVNGLKIPDGGVHIDTIMNNVVQG 287

Query: 329 VMAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCELS 386
           +   + KK K  ++K  ++KN L +  F+N +  N  F+SQ+KE +T     F     + 
Sbjct: 288 IRDKLVKKYK--SIKPGDIKNKLMIVCFINGM-PNLKFNSQSKEKITNSVKEFNEFSNID 344

Query: 387 EEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
             F+ K+     I++ ++     K++ +  K      + V    KL+         S++ 
Sbjct: 345 YSFINKILKNKSIIDPIIDIYKVKEALNADK----ALKSVEKSKKLKSEKYFRATKSQK- 399

Query: 447 TLILTEGDSAKALAMAGLS-VVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKIL 505
            L + EG S    A  G+S V+G +    + L+GK LN  + ++ +   N E+  + +IL
Sbjct: 400 YLCICEGFS----AYGGISQVLGNEHTSFYVLKGKPLNSWDVTNQKFAANRELSELYQIL 455

Query: 506 GLKQGVEYNNVKSLRYGHLMI 526
              +  E+ ++K  ++  + I
Sbjct: 456 S--ENAEFEDLKDGKFYEIKI 474


>gi|304373561|ref|YP_003858306.1| gp39plus60 DNA topoisomerase II large subunit [Enterobacteria phage
           RB16]
 gi|299829517|gb|ADJ55310.1| gp39plus60 DNA topoisomerase II large subunit [Enterobacteria phage
           RB16]
          Length = 631

 Score =  183 bits (465), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 189/659 (28%), Positives = 299/659 (45%), Gaps = 77/659 (11%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S  +HI  RP+ Y+GS+ +     +I  +       R + YV GL KI +EIL N+ D  
Sbjct: 31  SDRDHIRKRPNMYVGSVNREAHERFIQGK------FRKVEYVEGLVKIINEILDNSIDEA 84

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVPV-EIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  +H+L+++ ++G G+P  ++   EG  VP+ +    +  + SN+DD
Sbjct: 85  IRTDFKFANKIEVKIDHNLVTISDNGRGIPQDDVRTPEGKIVPKPVAAWTMAKSGSNFDD 144

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
              + T G NG G+ LTN +S+ FI ET++GKR     +V  N        +       +
Sbjct: 145 E-NRVTMGMNGVGSFLTNCYSSIFIGETSNGKR-----KVTINCTDGAQNMDYRTSPTKE 198

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T V F PD + F +  ++++   ++K R++ LA     SVK   N   +P K FA Y 
Sbjct: 199 QGTTVKFTPDFSIFGVDGIDEETKEVIKDRLMALAVAF-PSVKFTYNNEVLPNK-FAMYG 256

Query: 272 DMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
            MY +       + N +    +  +E  F+Q SFVNG+ T  GG HVD + + +   +  
Sbjct: 257 AMYGEKTIV---QTNNKISFILASTEDGFKQKSFVNGLDTKNGGVHVDCMIDGIYTELEP 313

Query: 332 VVNKKNKNANVKAHNVKNHLW--VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELS-EE 388
           ++ KK+     KA  VK  L   VF++   + PAFDSQTKE LT     F +   L+ ++
Sbjct: 314 MIKKKHAIEIPKAR-VKECLTLVVFLHNF-NAPAFDSQTKEKLTNTAGEFNNHAGLNYKK 371

Query: 389 FLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG-GRNSEQCT 447
             K++   S I+  ++  A  ++            +  +     +    +G   +  + T
Sbjct: 372 IAKQIMDTSEIITPIIESALIRKQAAEAAAITKAKKKAKKAKVAKHVPASGIDTDGVETT 431

Query: 448 LILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGL 507
           L LTEGDSA       +     +  G FPLRGK LN    S++ +L N E+  +  IL L
Sbjct: 432 LFLTEGDSAVG---QFIECRNEETQGAFPLRGKPLNTWGMSNSDILKNKELFELMAILNL 488

Query: 508 KQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKG 567
             G    +   + Y ++ IM D                             D DG  I  
Sbjct: 489 HPG----DSSEMTYDNIGIMVD----------------------------ADVDGGDILT 516

Query: 568 LLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLS-FYSMPDYEAWKESLGGNAS 625
           LLI F  S WP L       + +I TPI+ A  K G+    FYS+ D+  +++       
Sbjct: 517 LLIAFF-SRWPELFAKKK--IRYIRTPIIIA--KVGREEKWFYSLDDFTPFRD------K 565

Query: 626 SWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
           +   +Y KGLG S  KE  +      L K D +   D+  + +EL F     + RK W+
Sbjct: 566 AKEARYIKGLG-SLRKEDYDRVLGDQL-KYDTIVLGDEYKDVLELCFGDDS-DPRKDWV 621


>gi|321473415|gb|EFX84382.1| hypothetical protein DAPPUDRAFT_3936 [Daphnia pulex]
          Length = 269

 Score =  182 bits (463), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/267 (35%), Positives = 163/267 (61%), Gaps = 9/267 (3%)

Query: 832  LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
            LL Y  +  Q IEP ++ PIIP VLVNG+ GIGTG+ + IP  NPR+I+ N++R+LNGE 
Sbjct: 1    LLKYRTDGNQSIEPEYFAPIIPMVLVNGANGIGTGFKTKIPKQNPREIIENLKRMLNGEK 60

Query: 892  MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FL 950
              PM PW++G+ GT+E+         + ++G +  ++ TT+ I ELP+   T++Y++  L
Sbjct: 61   PNPMDPWFKGYRGTVERIDQ----FNFVISGELAVLSPTTIEITELPVDVPTENYKKSVL 116

Query: 951  ESII---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
            E ++   ++    I  ++++  D  V F V ++E+ M + + EG  + FKL +  S  +M
Sbjct: 117  EKLLCGSEECPPIITDYQEHHTDNNVRFVVTMTEKMMQQVESEGFHRAFKLQSVYSLRSM 176

Query: 1008 HLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVN 1067
             L+DS G +K Y++ + I+ EF+ +RLE Y KR+      +E    +L N+  F+  + +
Sbjct: 177  LLYDSNGSLKTYNSVDDIMNEFYEVRLELYRKRRDYFSGKVEALRARLVNQNNFLTEISS 236

Query: 1068 GEIVVNNRKRTDLLL-ELRQKGFTPFP 1093
              ++V++ K+ D+LL ELR++ + P P
Sbjct: 237  KVLIVDSEKKFDVLLEELRRRNYAPDP 263


>gi|37651488|ref|NP_932362.1| gp60plus39 [Aeromonas phage 44RR2.8t]
 gi|34732788|gb|AAQ81326.1| topoisomerase II large subunit [Aeromonas phage 44RR2.8t]
          Length = 607

 Score =  182 bits (462), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 185/659 (28%), Positives = 295/659 (44%), Gaps = 73/659 (11%)

Query: 38  EHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRD 97
           EH++LRP+ Y+GS+       +++ +       +++SYVPGL KI DEI+ N+ D   R 
Sbjct: 12  EHVILRPNMYVGSVAYEPHERFLFGK------FQSVSYVPGLVKIIDEIIDNSVDEGIRT 65

Query: 98  PKMDAVKVVIDQEHDL----ISVHNSGDGVPVEIHQEEGVYVPELI--FGHLLTSSNYDD 151
               A K  ID   DL    ++V ++G G+P  + +     +P+ +  +   +  SN+DD
Sbjct: 66  DFKFANK--IDIRFDLLEGSVTVVDNGRGIPQSMVETPDGEMPKPVAAWTQTMAGSNFDD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR-LKKYKQVFTNNMGKKSEPNISKCKEG 210
              + + G NG G+ LTN FS +FI ET DGK  L        +N+  +++P   K    
Sbjct: 124 -TNRVSMGMNGVGSSLTNFFSKKFIGETCDGKNFLTVTCSEGASNIDWETKPGKIKG--- 179

Query: 211 DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
              T V F PD   F    ++  ++ ++  R+  L+  +   +K  +NG    +K FA+Y
Sbjct: 180 ---TSVYFIPDEKHFEGRTIDQQIIDIISDRITALS-VVFPQIKFTINGQIASMK-FADY 234

Query: 271 VDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVM 330
             M+           ++R+ I +  S   F+QVS+VNG+    GG+H+DY+ + ++  +M
Sbjct: 235 AKMFGDESLIVE---SDRFSIAICNSPEGFRQVSYVNGLNIKNGGSHIDYLVDGISEELM 291

Query: 331 AVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELS-EEF 389
             + KK+K    KA   +    V V   + N  FDSQTKE LT       S  +L  ++ 
Sbjct: 292 PAIKKKHKIEISKARVKECLTMVVVVRGMSNLRFDSQTKERLTNPAGEVKSHFDLDFKKL 351

Query: 390 LKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG--GRNSEQCT 447
            K++     I++ ++  A   +    +K   TK +     +       AG  GRN  + T
Sbjct: 352 SKQIMNTDAILQPIIE-AALARHLAAEKAAMTKAQKAAAKTNCAKHIKAGEWGRNDIETT 410

Query: 448 LILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGL 507
           L LTEG+SA       L V   +  G + LRGK++N      + VL N+E+ +I  I GL
Sbjct: 411 LFLTEGESAIGYL---LKVKDENLHGGYALRGKVMNTWGMKGSDVLKNNELSDICAITGL 467

Query: 508 KQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKG 567
                 +++   +Y ++ IMTD                             D  GS    
Sbjct: 468 DLA-NPDDISQRKYKNIAIMTDA--------------------------DPDGQGSIYPC 500

Query: 568 LLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSW 627
           LL  F    WP L    S  V F+   V   NK      FY++ ++E  K+   G    W
Sbjct: 501 LLAFFAR--WPKLFDEGS--VRFVKTPVVILNKGKNTKWFYTLTEFEKEKKDYKG----W 552

Query: 628 SIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQ 686
            ++Y KGLG+    E  +   N      D V   D   E  E+         RK+W+ Q
Sbjct: 553 DLRYIKGLGSLREHEYSDVVNNPNY---DIVDLGDDWEELFEMLLGDDA-ALRKEWMSQ 607


>gi|242095834|ref|XP_002438407.1| hypothetical protein SORBIDRAFT_10g016510 [Sorghum bicolor]
 gi|241916630|gb|EER89774.1| hypothetical protein SORBIDRAFT_10g016510 [Sorghum bicolor]
          Length = 263

 Score =  182 bits (461), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/301 (38%), Positives = 165/301 (54%), Gaps = 64/301 (21%)

Query: 302 QVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDN 361
           + +FVNG+  I+GG   D +   V  H+ + + +  KN +    +VK+HLWVF+NA  D 
Sbjct: 12  KFNFVNGVV-IEGGVQFDTITRHVEEHLKSSIKRIMKNVH-NIEDVKSHLWVFINA--DY 67

Query: 362 PAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT 421
           P F  +              + +++  F+ K   +  + ETL +WA  ++ ++++ N   
Sbjct: 68  PFFYGE-------------PQLQVAHSFIFKEIFRCALKETL-AWALKEEDENIEANP-- 111

Query: 422 KTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKL 481
                   +K EDA  AGG +S++CTLI+TEGDSAK LA+     V RD FGV  L+GKL
Sbjct: 112 --------TKFEDATRAGGVDSQKCTLIITEGDSAKDLALGS---VRRDYFGVLALKGKL 160

Query: 482 LNVREASSNQVLNNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQVLLAPLSF 538
           L VR+AS  ++L+N EI N++KI+GL     YN   ++K LRYG++MIMTD         
Sbjct: 161 LKVRDASLKKILDNEEINNMRKIIGLDYKKHYNDEKDLKDLRYGNVMIMTD--------- 211

Query: 539 LLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI--PSFLVEFITPIVK 596
                              QD DG HIKGL+IN  H FWPSLLK    SFL E +TP+VK
Sbjct: 212 -------------------QDPDGFHIKGLIINLFHVFWPSLLKTKSKSFLCELVTPLVK 252

Query: 597 A 597
            
Sbjct: 253 V 253


>gi|321472241|gb|EFX83212.1| hypothetical protein DAPPUDRAFT_315938 [Daphnia pulex]
          Length = 206

 Score =  181 bits (460), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/184 (51%), Positives = 123/184 (66%), Gaps = 9/184 (4%)

Query: 719 QRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
           +RS PS++DGLK  QRK+LF    RN  K+  VA+ +  V+EH+A H+   SL   I+ M
Sbjct: 4   ERSTPSLIDGLKLEQRKVLFTVLNRND-KDVNVARLALSVAEHTALHYEPGSLMRPIMWM 62

Query: 779 AQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNE 838
           AQDFVGSNN++LL PNGQFGTR+QGGKDAAS   I T +S +TR +F   DD LL +  +
Sbjct: 63  AQDFVGSNNVSLLIPNGQFGTRHQGGKDAASPPLISTSISKLTRLIFHPQDDPLLTHRMD 122

Query: 839 DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLL-NGEMMEPMHP 897
             Q IEP +Y PIIP +LVNG+  IG        +YNPRDI  N++R+L + E   PM P
Sbjct: 123 GDQSIEPEFYAPIIPLILVNGTSRIGM-------SYNPRDITENLKRMLDDDEEPIPMDP 175

Query: 898 WYRG 901
           W++G
Sbjct: 176 WFKG 179


>gi|402590951|gb|EJW84881.1| hypothetical protein WUBG_04209 [Wuchereria bancrofti]
          Length = 319

 Score =  180 bits (457), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 189/338 (55%), Gaps = 34/338 (10%)

Query: 848  YMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIE 907
            Y PIIP +L+NG+EGIGTGW++ I    PR +++N +RL++G  ++ M P +R F GTI+
Sbjct: 6    YCPIIPMILINGAEGIGTGWATKILPRCPRQVISNAQRLIDGRPLQEMLPHFRKFQGTID 65

Query: 908  KTASKEAGVTYTVTGIIEEVN-ETTLR--IKELPIRRWTQDYRE-FLESIIDQNDSFIRG 963
            +TA ++    Y+++G +     ++ LR  I ELP   W   Y+E  L+S I   +     
Sbjct: 66   ETAPRQ----YSISGKVSYRRLKSGLRAVITELPTGIWNNKYKEKVLDSAIKNGN----- 116

Query: 964  FRQYSDDTTVDFEVFLSEESMMRTKQE--GLLKKFKLTTTISTSNMHLFDSKGVIKKYDT 1021
            + +   ++ V F + + ++ ++  K++   L +  KL +  S ++M LFD K V++KYD+
Sbjct: 117  YEELHTESNVHFILHVVDKPLLSDKKQIKALNRLLKLRSVASENSMILFDKKNVLQKYDS 176

Query: 1022 PEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLL 1081
              +I +EFF +R + Y +R++ +L  ++ +L  +EN+VRF+  ++NGEI++  + R +++
Sbjct: 177  TREIFQEFFEVRRQKYMERRECELIIMDGKLKFIENQVRFVDAIINGEIIIERKNRAEII 236

Query: 1082 LELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTL 1141
             +L +KGF   P  +K+             +   NP         D+ YLL M +  L+ 
Sbjct: 237  AQLAEKGFDSNPMKAKN-----------AADGNCNPP--------DFGYLLDMPLCRLSN 277

Query: 1142 EKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
            E++  L   R +L E    L+  T  SLW  DL+ L M
Sbjct: 278  EEILVLQEKRSELWERFKSLKSTTWRSLWSMDLNVLSM 315


>gi|294337976|emb|CBJ93814.1| Putative phage DNA topoisomerase (large subunit) [Campylobacter
           phage CP220]
          Length = 503

 Score =  179 bits (454), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 252/501 (50%), Gaps = 31/501 (6%)

Query: 30  MYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVN 89
           M +K +  EHIL RP  YIG+I+      +I E  S  + + T++YVPGL KI +EI+ N
Sbjct: 1   MIKKLTDREHILKRPSMYIGAIDSTNTEDFIIE--SGKIKYTTLNYVPGLIKIINEIIDN 58

Query: 90  AADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
           + D   R      + + +   +D +S+ + G G+PV    +   Y+PEL + H    SN+
Sbjct: 59  SVDAAIRSKFKSGLNISVKISNDTVSIEDDGTGIPVIKSGDH--YMPELAWNHAKAGSNF 116

Query: 150 DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
           DD+  + T G NG G+  TN++S  F   T DGK    +K    NN    SE NI   K+
Sbjct: 117 DDDANRVTIGTNGVGSYCTNVWSINFKGITDDGKNRYIFKS--KNNAETYSE-NIEASKK 173

Query: 210 GDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAE 269
               T V FKPDL +FN+  +++    ++ +R+++LA C  + +  + N  ++  KSF  
Sbjct: 174 SG--TLVEFKPDLERFNLKEIDETHKNIIYQRLLNLAICYPE-INFKFNSKKIDFKSFKN 230

Query: 270 YVDMYPKSVTRFHERVNERWEICVTLSE-GQFQQVSFVNGIATIKGGTHVDYVANQVANH 328
           Y++M+    + F    N+  +I +  +E   F+Q SFVNG+    GG H+D + + V   
Sbjct: 231 YLNMFS---SDFELYENQNIKIGIIPNELDDFKQFSFVNGLKIPDGGVHIDTIMSNVVQG 287

Query: 329 VMAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCELS 386
           +   + KK K  ++K  ++KN L +  F+N +  N  F+SQ+KE +T     F     + 
Sbjct: 288 IRDKLVKKYK--SIKPGDIKNKLMIVCFINGM-PNLKFNSQSKEKITNSVKEFNDFSNID 344

Query: 387 EEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
             F+ K+     I++ ++     K++ +  K      + V    KL+         S++ 
Sbjct: 345 YNFINKILKNKSIIDPIIDIYKVKEALNADK----ALKSVEKSKKLKSEKYFRATKSQK- 399

Query: 447 TLILTEGDSAKALAMAGLS-VVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKIL 505
            L + EG S    A  G+S V+G +    + L+GK LN  + ++ +   N E+  + +IL
Sbjct: 400 YLCICEGFS----AYGGISQVLGNEHTSFYVLKGKPLNSWDVTNQKFAANRELSELYQIL 455

Query: 506 GLKQGVEYNNVKSLRYGHLMI 526
              +  E+ ++K  ++  + I
Sbjct: 456 S--ENAEFEDLKDGKFYEIKI 474


>gi|294338171|emb|CBJ94207.1| Putative phage DNA topoisomerase (large subunit) [Campylobacter
           phage CPt10]
          Length = 503

 Score =  178 bits (451), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/480 (29%), Positives = 242/480 (50%), Gaps = 29/480 (6%)

Query: 30  MYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVN 89
           M +K +  EHIL RP  YIG+I+      +I E  S  + + T++YVPGL KI +EI+ N
Sbjct: 1   MIKKLTDREHILKRPSMYIGAIDSTNTEDFIIE--SGKIKYTTLNYVPGLIKIINEIIDN 58

Query: 90  AADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
           + D   R      + + +   +D +S+ + G G+PV    +   Y+PEL + H    SN+
Sbjct: 59  SVDAAIRSKFKSGLNISVKISNDTVSIEDDGTGIPVIKSGDH--YMPELAWNHAKAGSNF 116

Query: 150 DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
           DD+  + T G NG G+  TN++S  F   T DGK    +K    NN    SE NI   K+
Sbjct: 117 DDDANRVTIGTNGVGSYCTNVWSINFKGITDDGKNRYIFKS--KNNAETYSE-NIEASKK 173

Query: 210 GDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAE 269
               T V FKPDL +FN+  +++    ++ +R+++LA C  + +  + N  ++  KSF  
Sbjct: 174 SG--TLVEFKPDLERFNLKEIDETHKNIIYQRLLNLAICYPE-INFKFNSKKIDFKSFKN 230

Query: 270 YVDMYPKSVTRFHERVNERWEICVTLSE-GQFQQVSFVNGIATIKGGTHVDYVANQVANH 328
           Y++M+    + F    N+  +I +  +E   F+Q SFVNG+    GG H+D + + V   
Sbjct: 231 YLNMFS---SDFELYENQNIKIGIIPNELDDFKQFSFVNGLKIPDGGVHIDTIMSNVVQG 287

Query: 329 VMAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCELS 386
           +   + KK K  ++K  ++KN L +  F+N +  N  F+SQ+KE +T     F     + 
Sbjct: 288 IRDKLVKKYK--SIKPGDIKNKLMIVCFINGM-PNLKFNSQSKEKITNSVKEFNDFSNID 344

Query: 387 EEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQC 446
             F+ K+     I++ ++     K++ +  K      + V    KL+         S++ 
Sbjct: 345 YNFINKILKNKSIIDPIIDIYKVKEALNADK----ALKSVEKSKKLKSEKYFRATKSQK- 399

Query: 447 TLILTEGDSAKALAMAGLS-VVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKIL 505
            L + EG S    A  G+S V+G +    + L+GK LN  + ++ +   N E+  + +IL
Sbjct: 400 YLCICEGFS----AYGGISQVLGNEHTSFYVLKGKPLNSWDVTNQKFAANRELSELYQIL 455


>gi|311992997|ref|YP_004009863.1| DNA topoisomerase subunit [Enterobacteria phage CC31]
 gi|284177835|gb|ADB81501.1| DNA topoisomerase subunit [Enterobacteria phage CC31]
          Length = 614

 Score =  176 bits (446), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 170/629 (27%), Positives = 281/629 (44%), Gaps = 74/629 (11%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S  EHI+ R   YIGS        +++ +       ++++YVPG+ K+ DEI+ N+ D  
Sbjct: 11  SDREHIIKRSGMYIGSSAMEAHERFLFGK------FQSVTYVPGVIKLIDEIIDNSVDEA 64

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELI--FGHLLTSSNYDD 151
            R     A K+ ++ + + + V ++G G+P   +   EG  +P  +  +       N+ D
Sbjct: 65  IRTNFKFANKISVELKGNKVIVTDNGRGLPQAPVVTPEGDEIPGPVAAWTRPRAGGNFGD 124

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGK-----RLKKYKQVFTNNMGKKSEPNISK 206
           + ++ TGG NG G+ LTNIFS  F   T DG+     R     +  + +     E    +
Sbjct: 125 DAERKTGGMNGVGSALTNIFSVTFAGATCDGQNEIIVRCSNGAENISWDSKPAKEKEFIQ 184

Query: 207 CKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
            K G   T+VSF PD + F  + L +   +++  R+  LA  +   ++ +  G +V    
Sbjct: 185 TKTG---TRVSFIPDFSHFESSGLTEVDESIVLDRLQTLA-VVFPDIEFKFQGKKVN-GG 239

Query: 267 FAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVA 326
           F ++   + +      E   +   I +  S+  F+Q+++VN I T KGG+HVD V ++++
Sbjct: 240 FKKFAKQFDEEAIVADE---DNCSIAIGRSDDGFRQLTYVNNIHTSKGGSHVDLVVDELS 296

Query: 327 NHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC--- 383
           N ++ ++ +K K    KA   +   +V     + N  FDSQTKE LT       +     
Sbjct: 297 NELIPMLKRKYKLEVNKARIKECFTFVMFVRDMSNMRFDSQTKERLTSPWGEVKAHLNLD 356

Query: 384 --ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGR 441
             +L+++ +K       I+E +L+    K + +            +            G 
Sbjct: 357 YKKLAQQVMKSEAIHMPIIEAMLA---RKLAAEKAAETKAAKAASKAKVAKHIKPELYGN 413

Query: 442 NSEQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNVREASSNQVLNNSEIG 499
           + E+ TL LTEGDSA      G  +  RDR   G +PLRGK LN    ++ + + N E+ 
Sbjct: 414 DKEETTLFLTEGDSA-----IGYLLTTRDRKLHGGYPLRGKFLNTWGMTAAEAMKNKEVF 468

Query: 500 NIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQD 559
           +I  I GL  G +Y N   L Y ++ IMTD  +                          D
Sbjct: 469 DICAITGLTIGEDYEN---LNYKNIAIMTDADV--------------------------D 499

Query: 560 HDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKES 619
             GS    LL  F  S WP L +     + F+   V   +K  K   +Y+  +YEA K+ 
Sbjct: 500 GTGSIYPSLLAFF--SNWPRLFE--EGRIRFVKTPVIIMSKGDKQKWYYTAAEYEAEKDE 555

Query: 620 LGGNASSWSIKYYKGLGTSTSKEGKEYFQ 648
           L G    W ++Y KGLG+    E +   Q
Sbjct: 556 LAG----WKLRYIKGLGSLEEDEYERVIQ 580


>gi|260941163|ref|XP_002614748.1| hypothetical protein CLUG_05526 [Clavispora lusitaniae ATCC 42720]
 gi|238851934|gb|EEQ41398.1| hypothetical protein CLUG_05526 [Clavispora lusitaniae ATCC 42720]
          Length = 134

 Score =  175 bits (444), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 80/134 (59%), Positives = 104/134 (77%)

Query: 781 DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
           +FVGSNN+NLL+PNG FGTR  GGKD ++ RYIFT+L+ ITR +F   DD L +YL +D 
Sbjct: 1   NFVGSNNLNLLKPNGGFGTRAAGGKDFSAPRYIFTQLNEITRKVFNPLDDPLYNYLQDDE 60

Query: 841 QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
             +EP WY+P+IP +LVNG+EGIGTGWS+ IP++NP DIVAN+RRL+ G  +E M+PW+R
Sbjct: 61  STVEPEWYLPVIPMLLVNGAEGIGTGWSTNIPSFNPADIVANIRRLMEGGDLEEMYPWFR 120

Query: 901 GFGGTIEKTASKEA 914
           G+ G IEK  S E 
Sbjct: 121 GWEGEIEKIDSGEV 134


>gi|297792651|ref|XP_002864210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297310045|gb|EFH40469.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 411

 Score =  174 bits (440), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 92/168 (54%), Positives = 115/168 (68%), Gaps = 12/168 (7%)

Query: 6   RLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES 65
           +LPL   +NANV    A +     +    + +EHILL PD+YIGSIEKHTQ LW+YE+E 
Sbjct: 4   KLPLQNIDNANVAKAPASS-----LASAGNTIEHILLCPDSYIGSIEKHTQTLWVYEKEE 58

Query: 66  KTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPV 125
             M+ R+++YVPGLYKIFDEILVNAADNK+RDP MD+VKVVID E + ISV NSGDGVP+
Sbjct: 59  --MVCRSVTYVPGLYKIFDEILVNAADNKRRDPSMDSVKVVIDVEKNQISVCNSGDGVPL 116

Query: 126 EIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFST 173
               EEGVYVP + FG  L S NY+  + +    R   G   T+IF +
Sbjct: 117 ----EEGVYVPGIFFGPWL-SRNYNHPISRANHLRQKIGMPGTHIFPS 159



 Score = 59.3 bits (142), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 21/112 (18%)

Query: 1084 LRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEK 1143
            LR+K FT   +N+K +EA VAGAT+  E+S              Y+YLL +++  L  + 
Sbjct: 195  LREKWFTEILENAKPVEAAVAGATNAAEKSSY------------YNYLLQLSV--LITDT 240

Query: 1144 VQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEER 1195
            VQ + A RD++ + V+DL+ ATPESL +K       +L+ELDK DA+ +EER
Sbjct: 241  VQEVRAQRDQMMDAVEDLKNATPESLCLK-------ELEELDKQDAQPDEER 285



 Score = 46.2 bits (108), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 3/49 (6%)

Query: 1400 SPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSP---STSEEVAEVL 1445
            SPEKKVRK+R+SPFNKKS S++ R    EE S  +    S+SE+  +V 
Sbjct: 332  SPEKKVRKLRSSPFNKKSSSVMSRLANKEEESSENAAGNSSSEKSGDVF 380


>gi|398313547|emb|CCI88894.1| protein of unknown function [Yersinia phage phiD1]
          Length = 605

 Score =  173 bits (439), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 196/666 (29%), Positives = 294/666 (44%), Gaps = 84/666 (12%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S +EHI  R   YIGS        +++ +        ++ YVPGL K+ DEI+ N+ D  
Sbjct: 10  SDIEHIKKRSGMYIGSSANEMHERFLFGK------WESVQYVPGLVKLIDEIIDNSVDEG 63

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  +++ ++V ++G G+P   +    G  +P  +    +     N+ D
Sbjct: 64  IRTKFKFANKINVTIKNNQVTVEDNGRGIPQAMVKTPTGEEIPGPVAAWTIPKAGGNFGD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
           + ++ TGG NG G+ LTNIFS  F+ ET DG+     +   +N M  KS  +I    +G 
Sbjct: 124 DKERVTGGMNGVGSSLTNIFSVMFVGETGDGQNNIVVR--CSNGMENKSWEDIPGKWKG- 180

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T+V+F PD   F    L    + +   R+  LA  +   ++   NG +V   +F +Y 
Sbjct: 181 --TRVTFIPDFMSFETNELSQVYLDITLDRLQTLA-VVYPDIQFTFNGKKVQ-GNFKKYA 236

Query: 272 DMYPKSVTRFHERVNER--WEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHV 329
             Y +     H  V E+    I V  S   F+Q+++VN I T  GG H+D V + +   +
Sbjct: 237 RQYDE-----HAIVQEQENCSIAVGRSPDGFRQLTYVNNIHTKNGGHHIDCVMDDICEDL 291

Query: 330 MAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCEL-- 385
           +  + +K K    KA  VK  L +  FV  +  N  FDSQTKE LT       S  +L  
Sbjct: 292 IPQIKRKFKIDVTKAR-VKECLTIVMFVRDM-KNMRFDSQTKERLTSPFGEIRSHIQLDA 349

Query: 386 ---SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
              S   L        I+E  L  A    ++   +    K      + K   ANL G   
Sbjct: 350 KKISRAILNNEAILMPIIEAAL--ARKLAAEKAAETKAAKKASKAKVHKHIKANLCG--K 405

Query: 443 SEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIK 502
               TL LTEGDSA       + V  ++  G +PLRGK+LN    S   +L N E+ +I 
Sbjct: 406 DADTTLFLTEGDSAIGYL---IDVRDKELHGGYPLRGKVLNSWGMSYADMLKNKELFDIC 462

Query: 503 KILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDG 562
            I GL  G +  N   L Y ++ IMTD                             DHDG
Sbjct: 463 AITGLVLGEKAEN---LNYHNIAIMTD----------------------------ADHDG 491

Query: 563 -SHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLSFYSMPDYEAWKESL 620
              I   L+ F  S WP L +     + F+ TP++ A     K   FY++ +YE+ K++L
Sbjct: 492 LGSIYPSLLGFF-SNWPELFE--QGRIRFVKTPVIIA-QVGKKQEWFYTVAEYESAKDAL 547

Query: 621 GGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEAR 680
             +    SI+Y KGLG+    E +E  QN      D V   +   E  E+       + R
Sbjct: 548 PKH----SIRYIKGLGSLEKSEYREMIQNPVY---DVVKLPENWKELFEMLMGDNA-DLR 599

Query: 681 KKWLLQ 686
           KKW+ Q
Sbjct: 600 KKWMSQ 605


>gi|145480575|ref|XP_001426310.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124393384|emb|CAK58912.1| unnamed protein product [Paramecium tetraurelia]
          Length = 221

 Score =  173 bits (438), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 86/154 (55%), Positives = 112/154 (72%), Gaps = 4/154 (2%)

Query: 24  NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK-TMIHRTISYVPGLYKI 82
           +K +E++Y+  SQ+EHILLRPDTYIGS+E   Q LWI E+  + +      SY  GLYKI
Sbjct: 2   SKNVEDVYKMVSQVEHILLRPDTYIGSVEISDQELWICEDSDQISFKFEEFSYCQGLYKI 61

Query: 83  FDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
           FDEILVNAADN QRD   D + V ID  +D I V N+G G+P++IH++  +YVPE+IFG 
Sbjct: 62  FDEILVNAADNYQRDKSTDRISVSID--NDSIMVENTGAGIPIQIHKQYNIYVPEMIFGR 119

Query: 143 LLTSSNYDDNVKKTTGGRNGYGAKLT-NIFSTEF 175
           LLTSSNYDD+ +K TGGRNG+G K++   FS+ F
Sbjct: 120 LLTSSNYDDSEQKVTGGRNGFGDKVSQTCFSSIF 153


>gi|397134023|gb|AFO10530.1| DNA gyrase subunit B [Escherichia phage ECML-134]
          Length = 605

 Score =  172 bits (437), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 182/627 (29%), Positives = 286/627 (45%), Gaps = 76/627 (12%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S +EHI  R   YIGS        +++ +        ++ YVPGL K+ DEI+ N+ D  
Sbjct: 10  SDIEHIKKRSGMYIGSSANEMHERFLFGK------WESVQYVPGLVKLIDEIIDNSVDEG 63

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  +++ ++V ++G G+P   +    G  +P  +    +     N+ D
Sbjct: 64  IRTKFKFANKINVTIKNNQVTVEDNGRGIPQAMVKTPTGEEIPGPVAAWTIPKAGGNFGD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
           + ++ TGG NG G+ LTNIFS  F+ ET DG+     +   +N M  KS  +I    +G 
Sbjct: 124 DKERVTGGMNGVGSSLTNIFSVMFVGETGDGQNNIVVR--CSNGMENKSWEDIPGKWKG- 180

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T+V+F PD   F    L    + +   R+  LA  +   ++   NG +V   +F +Y 
Sbjct: 181 --TRVTFIPDFMSFETNELSQVYLDITLDRLQTLA-VVNPDIQFTFNGKKVQ-GNFKKYA 236

Query: 272 DMYPKSVTRFHERVNER--WEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHV 329
             Y +     H  V E+    I V  S   F+Q+++VN I T  GG H+D V + +   +
Sbjct: 237 RQYDE-----HAIVQEQENCSIAVGRSPDGFRQLTYVNNIHTKNGGHHIDCVMDDICEDL 291

Query: 330 MAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCEL-S 386
           +  + +K K  +V    VK  L +  FV  +  N  FDSQTKE LT       S  +L +
Sbjct: 292 IPQIKRKFK-IDVTKARVKECLTIVMFVRDM-KNMRFDSQTKERLTSPFGEIRSHIQLDA 349

Query: 387 EEFLKKVTAKSGIVETLLSWANFKQ--SKDLKKNDGTKTEDVRGISKLEDANLAGGRNSE 444
           ++  + +     I+  ++  A  ++  ++   +    K      + K   ANL G     
Sbjct: 350 KKISRAILNNEAILMPIIEAALARKLAAEKAAETKAAKKASKAKVHKHIKANLCG--KDA 407

Query: 445 QCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKI 504
             TL LTEGDSA       + V  ++  G +PLRGK+LN    S   +L N E+ +I  I
Sbjct: 408 DTTLFLTEGDSAIGYL---IDVRDKELHGGYPLRGKVLNSWGMSYADMLKNKELFDICAI 464

Query: 505 LGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDG-S 563
            GL  G +  N   L Y ++ IMTD                             DHDG  
Sbjct: 465 TGLVLGEKAEN---LNYHNIAIMTD----------------------------ADHDGLG 493

Query: 564 HIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLSFYSMPDYEAWKESLGG 622
            I   L+ F  S WP L +     + F+ TP++ A     K   FY++ +YE+ K++L  
Sbjct: 494 SIYPSLLGFF-SNWPELFE--QGRIRFVKTPVIIA-QIGKKQEWFYTVAEYESAKDALPK 549

Query: 623 NASSWSIKYYKGLGTSTSKEGKEYFQN 649
           +    SI+Y KGLG+    E +E  QN
Sbjct: 550 H----SIRYIKGLGSLEKSEYREMIQN 572


>gi|431808945|ref|YP_007235842.1| phage DNA topoisomerase large subunit #T4-like gp60 #T4 GC1464
           [Yersinia phage phiR1-RT]
 gi|398313234|emb|CCI88583.1| phage DNA topoisomerase large subunit #T4-like gp60 #T4 GC1464
           [Yersinia phage phiR1-RT]
          Length = 606

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 196/672 (29%), Positives = 298/672 (44%), Gaps = 98/672 (14%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTI--SYVPGLYKIFDEILVNAAD 92
           S +EHI  R   YIGS           E   + M  R I  +YVPGL K+ DEI+ N+ D
Sbjct: 10  SDIEHIKKRSGMYIGSSSN--------EAHERFMFGRFIQVNYVPGLVKLIDEIIDNSVD 61

Query: 93  NKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE-IHQEEGVYVPELIFGHLL--TSSNY 149
              R     A K+ +  + + + V ++G G+P + +  + G  +P  +    +     N+
Sbjct: 62  ESIRTNFKFANKIDVKIKDNTVIVEDNGRGIPQDLVIDQTGESIPGPVAAWTIPKAGGNF 121

Query: 150 DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
            D+ ++ TGG NG G+ LTNIFS  F+ ET +GK         +N M  K      + KE
Sbjct: 122 GDDAERKTGGMNGVGSSLTNIFSVNFVGETGNGKTAICVN--CSNGMDTK------EWKE 173

Query: 210 G-DNW--TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
              NW  T+V+F PD   F    L    + +   R+  LA  +   ++ + NG ++   +
Sbjct: 174 TKSNWRGTRVTFTPDFKTFETDELSQVYLDITLDRLQTLA-VIYPDIEFKFNGKKID-GN 231

Query: 267 FAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVA 326
           F +Y   + + V     +  +   +   +S   F+Q+++VN I T  GG HV+ V + + 
Sbjct: 232 FKKYSKQFGEEVVI---QETDTVSMAFAISPDGFRQLTYVNNIHTKNGGHHVECVMDDIC 288

Query: 327 NHVMAVVNKKNKNANVKAHNVKNHL--WVFVNALIDNPAFDSQTKETLTLRQSSFG---- 380
            H++  + KK K  +V    +K  L   +F+  +  N  FDSQTKE LT   S FG    
Sbjct: 289 EHLIPAIKKKYKGIDVTKARIKECLTMLMFIRDM-SNMRFDSQTKERLT---SPFGEIRN 344

Query: 381 ----SKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
                  ++S   LK       IVE  L  A    ++   +    K      + K   AN
Sbjct: 345 HIQIDAKKISAAILKSEELIMPIVEAAL--ARKLAAEKAAETKAAKKASKATVVKHIKAN 402

Query: 437 LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNVREASSNQVLN 494
            + G +  + TL LTEGDSA      G  +  RDR   G +PLRGK +N     ++++L 
Sbjct: 403 -SYGNDKLETTLFLTEGDSA-----IGYLIEVRDRALHGGYPLRGKFMNTWGMPASKILE 456

Query: 495 NSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCF 554
           N E   I  I GL  G    N   L Y ++ IMTD  +                      
Sbjct: 457 NREAFEICAITGLTIGEPAEN---LGYRNIAIMTDADV---------------------- 491

Query: 555 MLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLS-FYSMPD 612
               D  GS    LL  F    WP L +     + F+ TP++ A  + GK    FY +P+
Sbjct: 492 ----DGTGSIYPSLLAFFTQ--WPELFE--QGRIRFVKTPVIIA--QVGKAQKWFYDLPE 541

Query: 613 YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
           Y+A KE++  +    SI+Y KGLG+ T  E ++  Q       D V   +   E  E+  
Sbjct: 542 YDAVKETMPKH----SIRYIKGLGSLTRDEYEKVIQEPVY---DVVSLPENWKELFEMLL 594

Query: 673 SKKKIEARKKWL 684
            K   E RK+W+
Sbjct: 595 GKNP-ELRKEWM 605


>gi|423261781|ref|YP_007010261.1| DNA topoisomerase II large subunit [Aeromonas phage CC2]
 gi|394778302|gb|AFN39509.1| DNA topoisomerase II large subunit [Aeromonas phage CC2]
          Length = 667

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 194/701 (27%), Positives = 312/701 (44%), Gaps = 96/701 (13%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S  EHI L  D Y+GS+ + T  + +        + +   Y+PGL KI DEI+ N+ D  
Sbjct: 10  SDYEHIFLNSDMYVGSLSEETHLVLV----DGKFVEK--QYIPGLVKIIDEIIDNSVDEA 63

Query: 95  QR-DPKM-DAVKVVIDQEHDLISVHNSGDGVP---VEIHQEEGVYVPELIFGHLLTSSNY 149
            R D K  + + +++D + + +S+ ++G G+P   V+  + E +  P+  +    +  N+
Sbjct: 64  IRTDFKFANKIDIIVDDQTNQVSISDNGRGIPQYDVKTPEGETIPYPQACYTRARSGGNF 123

Query: 150 DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
             + K    G+NG G+ LTN++ST F   T DGK         T N   +S    +K K 
Sbjct: 124 SADRKGI--GKNGVGSVLTNLYSTMFRATTCDGKNTVTI--YCTQNAEHQS---YTKKKG 176

Query: 210 GDNWTKVSFKPDLA-KFNM-THLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSF 267
           G   T V F PDL  KFN+   +  DVV +++ RV ++   L   VK   N  +V  K  
Sbjct: 177 GTQGTTVEFIPDLLDKFNIFGGMPPDVVDVIRSRV-EILSVLFPQVKFTFNKKKVDSKFK 235

Query: 268 AEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVAN 327
               D     V       NE     +  S+ +F+Q+S+VNG+ T +GG HV+Y+ N + +
Sbjct: 236 KFASDFGDPVVFE-----NENCSFFIGTSD-EFRQLSYVNGVHTKQGGNHVEYLINSLCD 289

Query: 328 HVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELS- 386
            +  ++ +K K    KA   +N L        +   FD QTKE L+         C +  
Sbjct: 290 ELTPMIKRKFKVEINKARIKENTLLFLSLRGFEGAKFDGQTKERLSNSNGQIKDHCGIDI 349

Query: 387 EEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED---VRGISKLEDANLAGGRNS 443
           +   KK+ +   ++  ++  A  K+   ++K   TK +       + K   AN  G +  
Sbjct: 350 KSIAKKMISNDSVIMPIVESAIAKRDA-VEKALATKAQKKALTANVPKHIQANKYGKKGF 408

Query: 444 EQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNVREASSNQVLNNSEIGNI 501
           E  TL LTEGDSA     +G   + RD    G FPL+GKLL+V +    +V+ N EI NI
Sbjct: 409 ET-TLFLTEGDSA-----SGPLGITRDHDTQGGFPLKGKLLSVHKCEKVKVIANKEIANI 462

Query: 502 KKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLL----W-----FILIFAWITTF 552
             ILG+      ++ K L  G   I  D  ++A    +L    W      +    W  T 
Sbjct: 463 ISILGMT----LDDTKELPSGDFFINKDGFIVAENDEMLVNGKWVETRGIVTGKDWEQTL 518

Query: 553 ------------------------CFMLAQDHDG-SHIKGLLINFIHSFWPSLLKIPSFL 587
                                     ++  D DG  HI  L+I+  H +W   +     L
Sbjct: 519 QPDMLKYRGQKGVRRNTKANYDYVAILVDADPDGRGHISNLIISLFHKYWKHFIDQGRLL 578

Query: 588 V----EFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEG 643
           V    EFI+       +NGK  + +S    E   ++  G  S W  ++ KGLG     + 
Sbjct: 579 VCRTPEFIS-------RNGKE-TVWSYDTTEFHSKTFKG--SGWKHEHVKGLGQLDRADY 628

Query: 644 KEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
           K+  ++  +   + V  D+Q  +A+E+ F  +  + RK W+
Sbjct: 629 KKCIRDPYM---EVVRVDEQAADALEMFFGTES-DLRKVWM 665


>gi|67043834|gb|AAY64011.1| DNA topoisomerase 2 [Pelodiscus sinensis]
          Length = 150

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 79/124 (63%), Positives = 103/124 (83%), Gaps = 1/124 (0%)

Query: 26  TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
           +IE +YQKK+QLEHILLRPDTYIGS+E  TQ +W+Y+E+   + +R +++VPGLYKIFDE
Sbjct: 28  SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 86

Query: 86  ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
           ILVNAADNKQRDPKM  ++V ID E+++IS+ N+G G+PV  H+ E +Y+P LIFG LLT
Sbjct: 87  ILVNAADNKQRDPKMSCIRVTIDPENNVISIWNNGKGIPVVEHKVEKIYLPALIFGQLLT 146

Query: 146 SSNY 149
           SSNY
Sbjct: 147 SSNY 150


>gi|116326225|ref|YP_802945.1| DNA topoisomerase subunit DNA-dependent ATPase [Enterobacteria
           phage RB32]
 gi|228861318|ref|YP_002854339.1| gp60plus39 DNA topoisomerase subunit [Enterobacteria phage RB14]
 gi|414086365|ref|YP_006986554.1| topoisomerase II large subunit [Enterobacteria phage
           vB_EcoM_ACG-C40]
 gi|422934786|ref|YP_007004745.1| large subunit topoisomerase II [Escherichia phage wV7]
 gi|115343818|gb|ABI94827.1| DNA topoisomerase subunit DNA-dependent ATPase [Enterobacteria
           phage RB32]
 gi|227438334|gb|ACP30647.1| gp60plus39 DNA topoisomerase subunit [Enterobacteria phage RB14]
 gi|291290216|dbj|BAI83011.1| topoisomerase II large subunit [Enterobacteria phage AR1]
 gi|343177340|gb|AEM00666.1| large subunit topoisomerase II [Escherichia phage wV7]
 gi|383396146|gb|AFH19962.1| topoisomerase II large subunit [Enterobacteria phage
           vB_EcoM_ACG-C40]
          Length = 605

 Score =  172 bits (436), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 187/629 (29%), Positives = 281/629 (44%), Gaps = 80/629 (12%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S +EHI  R   YIGS        +++ +        ++ YVPGL K+ DEI+ N+ D  
Sbjct: 10  SDIEHIKKRSGMYIGSSANEMHERFLFGK------WESVQYVPGLVKLIDEIIDNSVDEG 63

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  +++ ++V ++G G+P   +    G  +P  +    +     N+ D
Sbjct: 64  IRTKFKFANKINVTIKNNQVTVEDNGRGIPQAMVKTPTGEEIPGPVAAWTIPKAGGNFGD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
           + ++ TGG NG G+ LTNIFS  F+ ET DG+     +   +N M  KS  +I    +G 
Sbjct: 124 DKERVTGGMNGVGSSLTNIFSVMFVGETGDGQNNIVVR--CSNGMENKSWEDIPGKWKG- 180

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T+V+F PD   F    L    + +   R+  LA  +   ++   NG +V   +F +Y 
Sbjct: 181 --TRVTFIPDFMSFETNELSQVYLDITLDRLQTLA-VVYPDIQFTFNGKKVQ-GNFKKYA 236

Query: 272 DMYPKSVTRFHERVNER--WEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHV 329
             Y +     H  V E+    I V  S   F+Q+++VN I T  GG H+D V + +   +
Sbjct: 237 RQYDE-----HAIVQEQENCSIAVGRSPDGFRQLTYVNNIHTKNGGHHIDCVMDDICEDL 291

Query: 330 MAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCEL-- 385
           +  + +K K    KA  VK  L +  FV  +  N  FDSQTKE LT       S  +L  
Sbjct: 292 IPQIKRKFKIDVTKAR-VKECLTIVMFVRDM-KNMRFDSQTKERLTSPFGEIRSHIQLDA 349

Query: 386 ---SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
              S   L        I+E  L  A    ++   +    K      + K   ANL G   
Sbjct: 350 KKISRAILNNEAILMPIIEAAL--ARKLAAEKAAETKAAKKASKAKVHKHIKANLCG--K 405

Query: 443 SEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIK 502
               TL LTEGDSA       + V  ++  G +PLRGK+LN    S   +L N E+ +I 
Sbjct: 406 DADTTLFLTEGDSAIGYL---IDVRDKELHGGYPLRGKVLNSWGMSYADMLKNKELFDIC 462

Query: 503 KILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDG 562
            I GL  G +  N   L Y ++ IMTD                             DHDG
Sbjct: 463 AITGLVLGEKAEN---LNYHNIAIMTD----------------------------ADHDG 491

Query: 563 -SHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLSFYSMPDYEAWKESL 620
              I   L+ F  S WP L +     + F+ TP++ A     K   FY++ +YE+ K++L
Sbjct: 492 LGSIYPSLLGFF-SNWPELFE--QGRIRFVKTPVIIA-QVGKKQEWFYTVAEYESAKDAL 547

Query: 621 GGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
             +    SI+Y KGLG+    E +E  QN
Sbjct: 548 PKH----SIRYIKGLGSLEKSEYREMIQN 572


>gi|422934424|ref|YP_007004385.1| DNA gyrase subunit B [Enterobacteria phage ime09]
 gi|339791207|gb|AEK12264.1| DNA gyrase subunit B [Enterobacteria phage ime09]
          Length = 605

 Score =  171 bits (434), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 186/629 (29%), Positives = 281/629 (44%), Gaps = 80/629 (12%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S +EHI  R   YIGS        +++ +        ++ YVPGL K+ DEI+ N+ D  
Sbjct: 10  SDIEHIKKRSGMYIGSSANEMHERFLFGK------WESVQYVPGLVKLIDEIIDNSVDEG 63

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  +++ ++V ++G G+P   +    G  +P  +    +     N+ D
Sbjct: 64  IRTKFKFANKINVTIKNNQVTVEDNGRGIPQAMVKTPTGEEIPGPVAAWTIPKAGGNFGD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
           + ++ TGG NG G+ LTNIFS  F+ ET DG+     +   +N M  KS  +I    +G 
Sbjct: 124 DKERVTGGMNGVGSSLTNIFSVMFVGETGDGQNNIVVR--CSNGMENKSWEDIPGKWKG- 180

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T+V+F PD   F    L    + +   R+  LA  +   ++   NG +V   +F +Y 
Sbjct: 181 --TRVTFIPDFMSFETNELSQVYLDITLDRLQTLA-VVYPDIQFTFNGKKVQ-GNFKKYA 236

Query: 272 DMYPKSVTRFHERVNER--WEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHV 329
             Y +     H  V E+    I V  S   F+Q+++VN I T  GG H+D V + +   +
Sbjct: 237 RQYDE-----HAIVQEQENCSIAVGRSPDGFRQLTYVNNIHTKNGGHHIDCVMDDICEDL 291

Query: 330 MAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCEL-- 385
           +  + +K K  +V    VK  L +  FV  +  N  FDSQTKE LT       S  +L  
Sbjct: 292 IPQIKRKFK-IDVTKARVKECLTIVMFVRDM-KNMRFDSQTKERLTSPFGEIRSHIQLDA 349

Query: 386 ---SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
              S   L        I+E  L  A    ++   +    K      + K   ANL G   
Sbjct: 350 KKISRAILNNEAILMPIIEAAL--ARKLAAEKAAETKAAKKASKAKVHKHIKANLCG--K 405

Query: 443 SEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIK 502
               TL LTEGDSA       + V  ++  G +PLRGK+LN    S   +L N E+ +I 
Sbjct: 406 DVDTTLFLTEGDSAIGYL---IDVRDKELHGGYPLRGKVLNSWGMSYADMLKNKELFDIC 462

Query: 503 KILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDG 562
            I GL  G +  N   L Y ++ IMTD                             DHDG
Sbjct: 463 AITGLVLGEKAEN---LNYHNIAIMTD----------------------------ADHDG 491

Query: 563 -SHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLSFYSMPDYEAWKESL 620
              I   L+ F  S WP L +     + F+ TP++ A     K   FY++ +YE+ K++L
Sbjct: 492 LGSIYPSLLGFF-SNWPELFE--QGRIRFVKTPVIIA-QVGKKQEWFYTVAEYESAKDAL 547

Query: 621 GGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
             +    SI+Y KGLG+    E +E  QN
Sbjct: 548 PKH----SIRYIKGLGSLEKSEYREMIQN 572


>gi|228860935|ref|YP_002853958.1| gp60plus39 DNA topoisomerase subunit [Enterobacteria phage RB51]
 gi|227438609|gb|ACP30921.1| gp60plus39 DNA topoisomerase subunit [Enterobacteria phage RB51]
          Length = 605

 Score =  171 bits (433), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 186/629 (29%), Positives = 280/629 (44%), Gaps = 80/629 (12%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S +EHI  R   YIGS        +++ +        ++ YVPGL K+ DEI+ N+ D  
Sbjct: 10  SDIEHIKKRSGMYIGSSANEMHERFLFGK------WESVQYVPGLVKLIDEIIDNSVDEG 63

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  +++ ++V ++G G+P   +    G  +P  +    +     N+ D
Sbjct: 64  IRTKFKFANKINVTIKNNQVTVEDNGRGIPQAMVKTPTGEEIPGPVAAWTIPKAGGNFGD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
           + ++ TGG NG G+ LTNIFS  F+ ET DG+     +   +N M  KS   I    +G 
Sbjct: 124 DKERVTGGMNGVGSSLTNIFSVMFVGETGDGQNNIVVR--CSNGMENKSWETIPGKWKG- 180

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T+V+F PD   F    L    + +   R+  LA  +   ++   NG +V   +F +Y 
Sbjct: 181 --TRVTFIPDFMSFETNELSQVYLDITLDRLQTLA-VVYPDIQFTFNGKKVQ-GNFKKYA 236

Query: 272 DMYPKSVTRFHERVNER--WEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHV 329
             Y +     H  V E+    I V  S   F+Q+++VN I T  GG H+D V + +   +
Sbjct: 237 RQYDE-----HAIVQEQENCSIAVGRSPDGFRQLTYVNNIHTKNGGHHIDCVMDDICEDL 291

Query: 330 MAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCEL-- 385
           +  + +K K  +V    VK  L +  FV  +  N  FDSQTKE LT       S  +L  
Sbjct: 292 IPQIKRKFK-IDVTKARVKECLTIVMFVRDM-KNMRFDSQTKERLTSPFGEIRSHIQLDA 349

Query: 386 ---SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
              S   L        I+E  L  A    ++   +    K      + K   ANL G   
Sbjct: 350 KKISRAILNNEAILMPIIEAAL--ARKLAAEKAAETKAAKKASKAKVHKHIKANLCG--K 405

Query: 443 SEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIK 502
               TL LTEGDSA       + V  ++  G +PLRGK+LN    S   +L N E+ +I 
Sbjct: 406 DADTTLFLTEGDSAIGYL---IDVRDKELHGGYPLRGKVLNSWGMSYADMLKNKELFDIC 462

Query: 503 KILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDG 562
            I GL  G +  N   L Y ++ IMTD                             DHDG
Sbjct: 463 AITGLVLGEKAEN---LNYRNIAIMTD----------------------------ADHDG 491

Query: 563 -SHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLSFYSMPDYEAWKESL 620
              I   L+ F  S WP L +     + F+ TP++ A     K   FY++ +YE+ K++L
Sbjct: 492 LGSIYPSLLGFF-SNWPELFE--QGRIRFVKTPVIIA-QVGKKQEWFYTVAEYESAKDAL 547

Query: 621 GGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
             +    SI+Y KGLG+    E +E  QN
Sbjct: 548 PKH----SIRYIKGLGSLEKSEYREMIQN 572


>gi|314121567|ref|YP_004063686.1| DNA topoisomerase II large subunit [Enterobacteria phage
           vB_EcoM-VR7]
 gi|313151324|gb|ADR32380.1| DNA topoisomerase II large subunit [Enterobacteria phage
           vB_EcoM-VR7]
          Length = 609

 Score =  171 bits (433), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 188/661 (28%), Positives = 289/661 (43%), Gaps = 76/661 (11%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S +EHI  R   YIGS        +++ E      ++++SYVPG+ K+ DEI+ N+ D  
Sbjct: 10  SDIEHIKKRSGMYIGSSSNEAHERFLFGE------YKSVSYVPGIVKLIDEIIDNSVDEA 63

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  + + ISV ++G G+P   +  + G  +P  +    +     N+ D
Sbjct: 64  IRTSFKFANKIDVQIKDNQISVSDNGRGIPQAMVVDQSGEQIPGPVAAWTIPKAGGNFGD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
           + ++ TGG NG G+ LTNIFS  F   TADG       ++  N          S  K   
Sbjct: 124 DAERKTGGMNGVGSSLTNIFSVLFTGITADGAN-----EITVNCSNGMENKGWSTKKSKG 178

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T V F PD + F    L    + +   R+  LA  +   ++   NG +V   +F ++ 
Sbjct: 179 KGTTVIFIPDFSHFEENSLSQIYLDITLDRLQTLA-VVYPDIQFTFNGKKVD-GNFKKFS 236

Query: 272 DMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
             +   V     +  +   +  T S   F+Q+++VN I T  GG HV+ V + +  H+  
Sbjct: 237 KQFGTEVVI---QETDTVSMAFTTSPDGFRQLTYVNNIHTKNGGHHVECVMDDICEHLQP 293

Query: 332 VVNKKNKNANVKAHNVKNHL--WVFVNALIDNPAFDSQTKETLT-----LRQSSFGSKCE 384
            + +K K   V    VK  L   +F+  +  N  FDSQTKE LT     +R        +
Sbjct: 294 AIKRKYKGIEVTKARVKECLTMLMFIRDM-SNMRFDSQTKERLTSPAGEIRNHIQIDAKK 352

Query: 385 LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSE 444
           +++  LK  +    IVE  L  A    ++   +    K      + K   AN   G +  
Sbjct: 353 IAQAILKNESLIMPIVEAAL--ARKLAAEKAAETKANKKASKAKVQKHIKAN-EWGNDKL 409

Query: 445 QCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKI 504
           + TL LTEGDSA       + V  R+  G +PLRGK  N     + +V+ N+E  ++  I
Sbjct: 410 ETTLFLTEGDSATG---PFIKVRDRELQGAYPLRGKFKNTWGLKAVEVMKNAEAFDVCAI 466

Query: 505 LGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSH 564
            GL  G    N   + Y ++ IMTD  +                          D  GS 
Sbjct: 467 TGLTIGQPAEN---MNYRNIAIMTDADV--------------------------DGVGSI 497

Query: 565 IKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
              LL  F  S WP L       + F+ TP++ A  K+ K   FYS+PDYE  K+ L  +
Sbjct: 498 YPSLLAFF--SNWPELFH--EGRIRFVKTPVIIAQLKD-KQEWFYSLPDYEEAKDKLPKH 552

Query: 624 ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
               +I+Y KGLG   S E  EY + +     + V   D   E  E+ F K+  + RK W
Sbjct: 553 ----TIRYIKGLG---SLEDSEYKRVLLEPVFEVVQLPDNWKELFEMLFGKEP-KLRKDW 604

Query: 684 L 684
           +
Sbjct: 605 M 605


>gi|156347131|ref|XP_001621647.1| hypothetical protein NEMVEDRAFT_v1g144180 [Nematostella vectensis]
 gi|156207799|gb|EDO29547.1| predicted protein [Nematostella vectensis]
          Length = 170

 Score =  171 bits (432), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 94/168 (55%), Positives = 114/168 (67%), Gaps = 13/168 (7%)

Query: 613 YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
           YE WK     N  SW +KYYKGLGTST KE KEYF ++  HK +F +E   D EAI +AF
Sbjct: 1   YEEWKAGTA-NHKSWKVKYYKGLGTSTPKEAKEYFSDMERHKINFKYEGPHDDEAIVMAF 59

Query: 673 SKKKIEARKKWL--------LQFEPGN---HLDQKE-KYIKYSDFVNKELILFSMADLQR 720
           SKKKI+ RK WL         + E G    +L +K+ K + Y DFVNKELILFS  D +R
Sbjct: 60  SKKKIQERKDWLTRGLEERKWRREQGLSELYLYEKDTKRVSYCDFVNKELILFSNTDNER 119

Query: 721 SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGE 768
           SIPS+VDGLKPGQRK++F  FKRN  +E KVAQ +G ++E SAYHHGE
Sbjct: 120 SIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLAGSIAELSAYHHGE 167


>gi|422935243|ref|YP_007005200.1| putative DNA topoisomerase II [Campylobacter phage CP21]
 gi|399498251|emb|CCH63592.1| putative DNA topoisomerase II [Campylobacter phage CP21]
          Length = 392

 Score =  170 bits (431), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 200/386 (51%), Gaps = 19/386 (4%)

Query: 30  MYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVN 89
           M +K +  EHIL RP  YIG+I+      +I E  S  + + T++YVPGL KI +EI+ N
Sbjct: 1   MIKKLTDREHILKRPSMYIGAIDSTNTEDFIIE--SGKIKYTTLNYVPGLIKIINEIIDN 58

Query: 90  AADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
           + D   R      + + +   +D +S+ + G G+PV    +   Y+PEL + H    SN+
Sbjct: 59  SVDAAIRSKFKSGLNISVKISNDTVSIEDDGTGIPVIKSGDH--YMPELAWNHAKAGSNF 116

Query: 150 DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
           DD+  + T G NG G+  TN++S  F   T DGK    +K    NN    SE NI   K+
Sbjct: 117 DDDANRVTIGTNGVGSYCTNVWSINFKGITDDGKNRYIFKS--KNNAETYSE-NIEASKK 173

Query: 210 GDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAE 269
               T V FKPDL +FN+  +++    ++ +R+++LA C  + +  + N  ++  KSF  
Sbjct: 174 S--GTLVEFKPDLERFNLKEIDETHKNIIYQRLLNLAICYPE-INFKFNSKKIDFKSFKN 230

Query: 270 YVDMYPKSVTRFHERVNERWEICVTLSE-GQFQQVSFVNGIATIKGGTHVDYVANQVANH 328
           Y++M+      +    N+  +I +  +E   F+Q SFVNG+    GG H+D + + V   
Sbjct: 231 YLNMFSPDFELYE---NQNIKIGIIPNELDDFKQFSFVNGLKIPDGGVHIDTIMSNVVQG 287

Query: 329 VMAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCELS 386
           +   + KK K  ++K  ++KN L +  F+N +  N  F+SQ+KE +T     F     + 
Sbjct: 288 IRDKLVKKYK--SIKPGDIKNKLMIVCFINEM-PNLKFNSQSKEKITNSVKEFNDFSNID 344

Query: 387 EEFLKKVTAKSGIVETLLSWANFKQS 412
             F+ K+     I++ ++     K++
Sbjct: 345 YNFINKILKNKSIIDPIIDIYKVKEA 370


>gi|308814356|ref|YP_003934630.1| topoisomerase II large subunit N-terminal region [Shigella phage
           SP18]
 gi|308205948|gb|ADO19347.1| topoisomerase II large subunit N-terminal region [Shigella phage
           SP18]
          Length = 610

 Score =  170 bits (431), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 188/661 (28%), Positives = 287/661 (43%), Gaps = 76/661 (11%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S +EHI  R   YIGS        +++ E      ++++SYVPG+ K+ DEI+ N+ D  
Sbjct: 11  SDVEHIKKRSGMYIGSSSNEAHERFLFGE------YKSVSYVPGIVKLIDEIIDNSVDEA 64

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  + + ISV ++G G+P   +  + G  +P  +    +     N+ D
Sbjct: 65  IRTSFKFANKIDVQIKDNQISVSDNGRGIPQAMVTDQNGEQIPGPVAAWTIPKAGGNFGD 124

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
           + ++ TGG NG G+ LTNIFS  F   TADG       ++  N          S  K   
Sbjct: 125 DAERKTGGMNGVGSSLTNIFSVLFTGITADGAN-----EITVNCSNGMENKGWSTKKSKG 179

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T V F PD + F    L    + +   R+  LA  +   ++   NG +V   +F ++ 
Sbjct: 180 KGTTVIFVPDFSHFEENSLSQIYLDITLDRLQTLA-VVYPDIQFTFNGKKVD-GNFKKFS 237

Query: 272 DMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
             +   V     +  +   +  T S   F+Q+++VN I T  GG HV+ V + +  H+  
Sbjct: 238 KQFGTEVVI---QETDTVSMAFTTSPDGFRQLTYVNNIHTKNGGHHVECVMDDICEHLQP 294

Query: 332 VVNKKNKNANVKAHNVKNHL--WVFVNALIDNPAFDSQTKETLT-----LRQSSFGSKCE 384
            + +K K   V    VK  L   +F+  +  N  FDSQTKE LT     +R        +
Sbjct: 295 AIKRKYKGIEVTKARVKECLTMLMFIRDM-SNMRFDSQTKERLTSPAGEIRNHIKIDAKK 353

Query: 385 LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSE 444
           +++  LK       IVE  L  A    ++   +    K      + K   AN   G +  
Sbjct: 354 IAQAILKNEPLIMPIVEAAL--ARKLAAEKAAETKANKKASKAKVQKHIKAN-EWGNDKL 410

Query: 445 QCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKI 504
           + TL LTEGDSA       + V  R+  G +PLRGK  N     + +V+ N+E  ++  I
Sbjct: 411 ETTLFLTEGDSATG---PFIKVRDRELQGAYPLRGKFKNTWGLKAVEVMKNAEAFDVCAI 467

Query: 505 LGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSH 564
            GL  G    N   + Y ++ IMTD  +                          D  GS 
Sbjct: 468 TGLTIGQPAEN---MNYRNIAIMTDADV--------------------------DGVGSI 498

Query: 565 IKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLSFYSMPDYEAWKESLGGN 623
              LL  F  S WP L       + F+ TP++ A  K+ K   FYS+PDYE  K+ L  +
Sbjct: 499 YPSLLAFF--SNWPELFH--EGRIRFVKTPVIIAQLKD-KQEWFYSLPDYEEAKDKLPKH 553

Query: 624 ASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
               +I+Y KGLG   S E  EY + +     + V   D   E  E+ F K   + RK W
Sbjct: 554 ----TIRYIKGLG---SLEDSEYKRVLLEPVFEVVQLPDNWKELFEMLFGKDS-QQRKDW 605

Query: 684 L 684
           +
Sbjct: 606 M 606


>gi|311993287|ref|YP_004010152.1| gp60plus39 DNA topoisomerase subunit [Acinetobacter phage Acj9]
 gi|295917244|gb|ADG59915.1| gp60plus39 DNA topoisomerase subunit [Acinetobacter phage Acj9]
          Length = 608

 Score =  169 bits (427), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 173/617 (28%), Positives = 271/617 (43%), Gaps = 75/617 (12%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S  +H+L RP  Y+GS        +++ +      ++ + YVPGL KI DEI+ N+ D  
Sbjct: 12  SDRDHVLKRPGMYVGSTSNEDHERFLFGK------YQKVKYVPGLVKIIDEIIDNSLDEA 65

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE-IHQEEGVYVPELIFGHLLTSS--NYDD 151
            R     A K+ +  + + + V ++G G+P   I   EG  +P  +     T +  N+ +
Sbjct: 66  IRTNFEFANKIELKIDGNAVFVSDNGRGIPQGLITTPEGTQLPGPVACWTRTKAGGNFGN 125

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
           +  + T G NG G+ LTNIFS EF   T DG+       +  +  G     +    K G 
Sbjct: 126 DADRKTAGMNGVGSSLTNIFSQEFTGTTCDGE-----NTITVHCTGNMENVDWKSKKGGR 180

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T VSF PD    +   ++  ++ +++ R+  LA  +  ++  +  G RV   +F +Y 
Sbjct: 181 QGTSVSFTPDFDLLDCKEIDQTIIDIVEDRLQILA-VIYPAIAFKFQGVRVQ-GNFKKYA 238

Query: 272 DMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
            MY ++         +  ++ +  SE  F+ +SFVN I T  GG+H+DY+  +++N +M 
Sbjct: 239 KMYDENAIIME---TDNIQLSIGRSEDGFRHLSFVNAIHTKVGGSHIDYLMEELSNELMP 295

Query: 332 VVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCE----- 384
           ++ +K+K   V    +K  L V  F+  +  N  FDSQTKE LT       +  +     
Sbjct: 296 MIKRKHK-VEVNKARIKECLTVLLFIKDM-PNMRFDSQTKERLTSPWGEVKAHMDIDVKK 353

Query: 385 LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSE 444
           L+  F+        I+E +L+     +     K      +           NL  GR   
Sbjct: 354 LARMFINNDDVLMPIIEAVLAKLLAAEKAANTKAAKKAAKAKVAKHI--KPNLY-GREDV 410

Query: 445 QCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNVREASSNQVLNNSEIGNIK 502
           + TL LTEGDSA      G  +  RDR   G +PLRGK++N      N++L N EI +I 
Sbjct: 411 ETTLFLTEGDSA-----IGYLLTTRDRELQGGYPLRGKVMNTWGMQPNEMLKNKEIFDIC 465

Query: 503 KILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDG 562
            I GL  G      + L Y ++ IM D                             D  G
Sbjct: 466 AITGLTIG---EKAEGLNYKNIAIMVDA--------------------------DPDGLG 496

Query: 563 SHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGG 622
           S    LL  F  S WP L       +     I+    K+ K   +Y +  YEA K  L G
Sbjct: 497 SIYPSLLAFF--SNWPELFDQGRIRLCKSPIIIAEKGKDEK--WYYDLAAYEAEKPLLKG 552

Query: 623 NASSWSIKYYKGLGTST 639
               ++I+Y KGLG+ T
Sbjct: 553 ----YTIRYIKGLGSLT 565


>gi|340502363|gb|EGR29060.1| hypothetical protein IMG5_163900 [Ichthyophthirius multifiliis]
          Length = 199

 Score =  167 bits (423), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 80/135 (59%), Positives = 101/135 (74%), Gaps = 3/135 (2%)

Query: 24  NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
           NKT+E+ YQKKSQLEHILLRPD+Y+GS+E   + LWI  +E    I + I +VP  YKIF
Sbjct: 5   NKTVEQKYQKKSQLEHILLRPDSYVGSVECEQKTLWILSKEGNHFIEKEIDFVPAFYKIF 64

Query: 84  DEILVNAADNKQRDPK---MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
           DEI VNAADN QR  +   MD +KV+I+ E ++ISV N+G G+PV +H+E  VYVPE+IF
Sbjct: 65  DEINVNAADNFQRRDEGKIMDTLKVLINPEQNMISVWNNGQGIPVVMHKEHNVYVPEMIF 124

Query: 141 GHLLTSSNYDDNVKK 155
           G LLT SNYDDN +K
Sbjct: 125 GQLLTGSNYDDNEQK 139


>gi|330858527|ref|YP_004414902.1| putative DNA topoisomerase subunit DNA-dependent ATPase [Shigella
           phage Shfl2]
 gi|327397461|gb|AEA72963.1| putative DNA topoisomerase subunit DNA-dependent ATPase [Shigella
           phage Shfl2]
          Length = 605

 Score =  167 bits (422), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 187/629 (29%), Positives = 281/629 (44%), Gaps = 80/629 (12%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S +EHI  R   YIGS        +++ +        ++ YVPGL K+ DEI+ N+ D  
Sbjct: 10  SDIEHIKKRSGMYIGSSANEMHERFLFGK------WESVQYVPGLVKLIDEIIDNSVDEG 63

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ ++ +++ ++V ++G G+P   +    G  +P  +    +     N+ D
Sbjct: 64  IRTKFKFANKINVNIKNNQVTVEDNGRGIPQAMVKTPTGEEIPGPVAAWTIPKAGGNFGD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
           + ++ TGG NG G+ LTNIFS  F+ ET DG+     +   +N M  KS   I    +G 
Sbjct: 124 DKERVTGGMNGVGSSLTNIFSVMFVGETGDGQNNIVVR--CSNGMENKSWETIPGKWKG- 180

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T+V+F PD   F    L    + +   R+  LA  +   ++   NG +V   +F +Y 
Sbjct: 181 --TRVTFIPDFMSFETNELSQVYLDITLDRLQTLA-VVYPDIQFTFNGKKVQ-GNFKKYA 236

Query: 272 DMYPKSVTRFHERVNER--WEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHV 329
             Y +     H  V E+    I V  S   F+Q+++VN I T  GG H+D V + +   +
Sbjct: 237 RQYDE-----HAIVQEQENCSIAVGRSPDGFRQLTYVNNIHTKNGGHHIDCVMDDICEDL 291

Query: 330 MAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCEL-- 385
           +  + +K K    KA  VK  L +  FV  +  N  FDSQTKE LT       S  +L  
Sbjct: 292 IPQIKRKFKIDVTKAR-VKECLTIVMFVRDM-KNMRFDSQTKERLTSPFGEIRSHIQLDA 349

Query: 386 ---SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
              S   L        I+E  L  A    ++   +    K      + K   ANL G   
Sbjct: 350 KKISRAILNNEAILMPIIEAAL--ARKLAAEKAAETKAAKKASKAKVHKHIKANLCG--K 405

Query: 443 SEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIK 502
               TL LTEGDSA       + V  ++  G +PLRGK+LN    S   +L N E+ +I 
Sbjct: 406 DADTTLFLTEGDSAIGYL---IDVRDKELHGGYPLRGKVLNSWGMSYADMLKNKELFDIC 462

Query: 503 KILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDG 562
            I GL  G +  N   L Y ++ IMTD                             DHDG
Sbjct: 463 AITGLVLGEKAEN---LNYHNIAIMTD----------------------------ADHDG 491

Query: 563 -SHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLSFYSMPDYEAWKESL 620
              I   L+ F  S WP L +     + F+ TP++ A     K   FY++ +YE+ K++L
Sbjct: 492 LGSIYPSLLGFF-SNWPELFE--QGRIRFVKTPVIIA-QVGKKQEWFYTVAEYESAKDAL 547

Query: 621 GGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
             +    SI+Y KGLG+    E +E  QN
Sbjct: 548 PKH----SIRYIKGLGSLEKSEYREMIQN 572


>gi|422934137|ref|YP_007004173.1| topoisomerase II, large subunit, N-terminal region [Enterobacteria
           phage Bp7]
 gi|345450646|gb|AEN93849.1| topoisomerase II, large subunit, N-terminal region [Enterobacteria
           phage Bp7]
          Length = 606

 Score =  167 bits (422), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 193/662 (29%), Positives = 293/662 (44%), Gaps = 84/662 (12%)

Query: 38  EHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRD 97
           EH++ RP  YIGS+       +++ E  K      I YV G+ K+ DEI+ N+ D   R 
Sbjct: 13  EHVIKRPGMYIGSVSFEDHERFLFGEFKK------IRYVAGVLKLVDEIIDNSVDEAIRT 66

Query: 98  --PKMDAVKVVIDQEHDLISVHNSGDGVP---VEIHQEEGVYVPELIFGHLLTSSNYDDN 152
                + + V ID + + ++V ++G G+P   V   + E +  P   +   +   N+ D+
Sbjct: 67  NFKFANKISVDIDLKTNKVTVEDNGRGIPQAMVITPEGEEIPGPVAAWTKTMAGGNFGDD 126

Query: 153 VKKTTGGRNGYGAKLTNIFSTEFIIETADGK-RLKKYKQVFTNNMGKKSEPNISKCKEGD 211
            ++ TGG+NG G+ LTNIFST F   T+DGK  L        +N+  K++ + +      
Sbjct: 127 KERVTGGQNGVGSSLTNIFSTLFTGVTSDGKNELSVNCSNNADNVSWKTKASKA------ 180

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
           N TKV F PD   F M+  +   + +   R+  L+  +   ++ + NG +V    F +Y 
Sbjct: 181 NGTKVEFIPDFTHFEMSAFDQIYLDVTLDRLQTLS-VVYPDIEFKFNGKKVQ-GQFKKYA 238

Query: 272 DMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
             + + V     +  E   I +  S   F+ +++VN I T  GG H++ V + + + ++ 
Sbjct: 239 KQFDEEVV---TQEQETCSIAIGRSPDGFRHLTYVNNIHTKNGGHHIECVMDDMCDELIP 295

Query: 332 VVNKKNKNANVKAHNVKNHL--WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEF 389
            + KK K    KA  VK  L   +FV  +  N  FDSQTKE LT       S  +L  + 
Sbjct: 296 AIKKKYKIEVTKAR-VKECLTMLMFVRGM-KNLRFDSQTKERLTSPYGEIRSHIKLDTKK 353

Query: 390 LKKVTAKS-----GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSE 444
           L K    S      I+E  L  A    ++   +    K      + K   ANL G     
Sbjct: 354 LAKSILNSEAVLMPIIEAAL--ARKLAAEKAAETKAAKKASKAKVHKHIKANLYG--KDA 409

Query: 445 QCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKI 504
             TL LTEGDSA       + V  +D  G +PLRGK++N    ++  ++ N E+ +I  I
Sbjct: 410 DTTLFLTEGDSAMG---PFIEVRNKDLQGGYPLRGKVMNTWGMTATDIMKNKELFDICAI 466

Query: 505 LGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSH 564
            GL  G      +   Y ++ IMTD  +                          D  GS 
Sbjct: 467 TGLIIG---EPAEKTNYRNIAIMTDADV--------------------------DGTGSI 497

Query: 565 IKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLS-FYSMPDYEAWKESLGG 622
              LL  F  S WP L K     V F  TP++ A  + GK    FY +P Y   K+SL  
Sbjct: 498 YPSLLAFF--SQWPELFK--QGRVRFCKTPVIIA--QVGKEQEWFYDVPSYTKAKDSLPK 551

Query: 623 NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
           +    SI+Y KGLG   S E  EY + I   K D V   +   E  E+       + RK 
Sbjct: 552 H----SIRYIKGLG---SLEKAEYRRMIQDPKFDVVQLPEDWKEQFEMLLGNDP-QLRKA 603

Query: 683 WL 684
           W+
Sbjct: 604 WM 605


>gi|299778959|ref|YP_003734153.1| 39 gene product [Enterobacteria phage IME08]
 gi|298105688|gb|ADI55332.1| gp39 topoisomerase II large subunit [Enterobacteria phage IME08]
          Length = 605

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 191/665 (28%), Positives = 286/665 (43%), Gaps = 85/665 (12%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S +EHI  R   YIGS        +++   ++      ++YVPGL K+ DEI+ N+ D  
Sbjct: 10  SDIEHIKKRSGMYIGSSANEAHGRFLFGNFTQ------VNYVPGLVKLIDEIIDNSVDEA 63

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  +++ +SV ++G G+P   +  + G  +P  +    +     N+ D
Sbjct: 64  IRTNFKFANKIDVQIKNNQVSVSDNGRGIPQAMVTDQNGEQIPGPVAAWTIPKAGGNFGD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
           + ++ TGG NG G+ LTNIFS  F   T+DG+      ++  N          S  K   
Sbjct: 124 DAERKTGGMNGVGSSLTNIFSVLFTGITSDGEN-----EITVNCSNGMENKGWSTKKSKG 178

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T V F PD   F    L    + +   R+  LA  +  S++   NG +V   +F +Y 
Sbjct: 179 KGTSVIFTPDFNHFEENSLSQIYLDITLDRLKTLA-VIYPSIQFTFNGKKVD-GNFKKYA 236

Query: 272 DMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
           + + K V     +  +   +  T S   F+ +++VN I T  GG HV+ V + +  H++ 
Sbjct: 237 NQFGKDVVI---QETDNVSMAFTTSPDGFRHLTYVNNIHTKNGGHHVECVFDDICEHLLP 293

Query: 332 VVNKKNKNANVKAHNVKNHL--WVFVNALIDNPAFDSQTKETLTLRQSSFG--------S 381
            + KK K   V    VK  L   +F+  +  N  FDSQTKE LT   S FG         
Sbjct: 294 GIKKKYKGIEVSKARVKECLTMLMFIRDM-SNMRFDSQTKERLT---SPFGEIRNHIQID 349

Query: 382 KCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGR 441
             ++S+  LK       IVE  L  A    ++   +    K      + K   ANL G  
Sbjct: 350 AKKISQYILKDEGLIMPIVEAAL--ARKLAAEKAAETKAAKKASKAKVHKHIKANLYG-- 405

Query: 442 NSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNI 501
                TL LTEGDSA       + V  +D  G +PLRGK++N    ++  ++ N E+ +I
Sbjct: 406 KDADTTLFLTEGDSAMG---PFIEVRNKDLQGGYPLRGKVMNTWGMTATDIMKNKELFDI 462

Query: 502 KKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHD 561
             I GL  G      +   Y ++ IMTD  +                          D  
Sbjct: 463 CAITGLVIG---EPAEKTNYRNIAIMTDADV--------------------------DGT 493

Query: 562 GSHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLS-FYSMPDYEAWKES 619
           GS    LL  F  S WP L +     V F  TP++ A  + GK    FY +P Y   K+S
Sbjct: 494 GSIYPSLLAFF--SQWPELFE--QGRVRFCKTPVIIA--QVGKEQEWFYDVPSYTKAKDS 547

Query: 620 LGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEA 679
           L       SI+Y KGLG   S E  EY + I   K D V   +   E  E+       + 
Sbjct: 548 L----PKHSIRYIKGLG---SLEKAEYRRMIQDPKFDVVQLPEDWKEQFEMLLGNDP-QL 599

Query: 680 RKKWL 684
           RK W+
Sbjct: 600 RKAWM 604


>gi|15606321|ref|NP_213700.1| gyrase B [Aquifex aeolicus VF5]
 gi|4033398|sp|O67137.1|GYRB_AQUAE RecName: Full=DNA gyrase subunit B
 gi|2983522|gb|AAC07098.1| gyrase B [Aquifex aeolicus VF5]
          Length = 792

 Score =  164 bits (416), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 174/605 (28%), Positives = 257/605 (42%), Gaps = 131/605 (21%)

Query: 23  PNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKI 82
           P +   E  +  S LEH+ LRP  YIG I +                        GL+ +
Sbjct: 9   PQEYTAEAIKAVSGLEHVRLRPAMYIGDIGER-----------------------GLHHL 45

Query: 83  FDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
             EIL NA D        + + V I +++  ++V + G G+PV+IH E G    E++F  
Sbjct: 46  IWEILDNAVDEAVAGYARN-ISVTIHRDNS-VTVEDDGRGIPVDIHPETGKPAVEMVFTM 103

Query: 143 LLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSE 201
           L     ++  V   +GG +G GA + N  S   I+E   DGK    Y+  F    G+  E
Sbjct: 104 LGAGGKFEKKVYTYSGGLHGVGASVVNALSEWLIVEVYRDGK---IYRMAFKR--GEVVE 158

Query: 202 PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
           P     +     TKVSFKPD   F  T ++ D+V   +KRV +LA  L   VK EL   R
Sbjct: 159 PLHVVGETKKRGTKVSFKPDPEIFETTEIKFDIV---EKRVRELA-YLNPEVKFELTDER 214

Query: 262 VP--------------VKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQV---- 303
           +               VK   E  +   K + R      E+  + V ++   FQ V    
Sbjct: 215 LGKHLIYKFDRGIEELVKYLNEGKEPLFKDIIRIQ---GEKEGVIVDIA---FQYVKDYK 268

Query: 304 ----SFVNGIATIKGGTHVDYVANQVANHVMAVVN----KKNKNANVKAHNVKNHLWVFV 355
               SFVN I T++GGTHV    + ++  V+ +       K    +    +V+  L   V
Sbjct: 269 ERIESFVNNIKTVEGGTHVTGFRSGLSKAVIRMAQGLKLAKELKKSFTGEDVREGLTAVV 328

Query: 356 NALIDNPAFDSQTKETL----------TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLS 405
              + NP F+ QTK  L          ++      S  E   + LK +  K+  +E  L+
Sbjct: 329 ACKVPNPQFEGQTKTKLGNQNVKQIVESITYDFLTSYFEKKRDVLKAIVEKA--IEAALA 386

Query: 406 WANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGG------RNSEQCTLILTEGDSAKAL 459
               K++K+L          VR  S LE+  L G        +  +C + L EGDSA   
Sbjct: 387 REAAKKAKEL----------VRRKSPLEEGVLPGKLADCSETDPSKCEIFLVEGDSA--- 433

Query: 460 AMAGLSVVGRDRF--GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVK 517
              G +   RDR    + PLRGK++NV +A  ++VL+N EI  I   LG   G E  ++K
Sbjct: 434 --GGSAKQARDRRYQAILPLRGKIINVEKARIDKVLSNDEIKAIVSALGCGIG-EDLDLK 490

Query: 518 SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFW 577
            LRY  +++MTD                             D DGSHI+ LL+ F + F 
Sbjct: 491 KLRYHKIILMTDA----------------------------DVDGSHIRTLLLTFFYRFM 522

Query: 578 PSLLK 582
           P L++
Sbjct: 523 PKLVE 527


>gi|2909389|emb|CAA76311.1| DNA topoisomerase II alpha [Cricetulus longicaudatus]
          Length = 214

 Score =  163 bits (413), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/216 (41%), Positives = 138/216 (63%), Gaps = 8/216 (3%)

Query: 878  DIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKEL 937
            ++V N+RRLL+GE   PM P Y+ F GTIE+ AS +    Y + G +  +N TT+ I EL
Sbjct: 1    EVVNNIRRLLDGEEPLPMLPSYKNFKGTIEELASNQ----YVINGEVAILNSTTIEISEL 56

Query: 938  PIRRWTQDYRE-FLESIIDQNDS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLL 993
            PIR WTQ Y+E  LE +++  +     I  +R+Y  DTTV F + ++EE +   ++ GL 
Sbjct: 57   PIRTWTQTYKEQVLEPMLNGTEKTPPLITDYREYHTDTTVKFVIKMTEEKLAEAERVGLH 116

Query: 994  KKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELL 1053
            K FKL T+++ ++M LFD  G +KKYDT   IL++FF +RL++Y  RK+  L  L  E  
Sbjct: 117  KVFKLQTSLTCNSMVLFDHVGCLKKYDTVLDILKDFFELRLKYYGLRKEWLLGMLGAESA 176

Query: 1054 KLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGF 1089
            KL N+ RFIL  ++G+I++ N+ + +L+  L Q+G+
Sbjct: 177  KLNNQARFILEKIDGKIIIENKPKKELIKVLIQRGY 212


>gi|395653419|gb|AFN69964.1| topoisomerase II large subunit [Aeromonas phage Aes516]
          Length = 514

 Score =  162 bits (411), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 226/490 (46%), Gaps = 54/490 (11%)

Query: 38  EHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRD 97
           EH++LRP+ Y+GS+       +++ +      ++++SYVPGL KI DEI+ N+ D   R 
Sbjct: 12  EHVILRPNMYVGSVAYEPHERFLFGK------YQSVSYVPGLVKIIDEIIDNSVDEGIRT 65

Query: 98  PKMDAVKVVIDQEHDL----ISVHNSGDGVPVEIHQEEGVYVPELI--FGHLLTSSNYDD 151
               A K  ID   DL    ++V ++G G+P  +       +P+ +  +   +  SN+DD
Sbjct: 66  DFKFANK--IDIRFDLLEGSVTVVDNGRGIPQSLVNTPDGEMPKPVAAWTQTMAGSNFDD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
              + + G NG G+ LTN FS  FI ET DGK                       C +G 
Sbjct: 124 T-NRVSMGMNGVGSSLTNFFSKTFIGETCDGKNFLTVT-----------------CSDGA 165

Query: 212 ---NW---------TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
              NW         T V F PD   F    ++  +V ++  R+  L+    K +K  +NG
Sbjct: 166 SQVNWETKPGKIKGTSVYFIPDEKHFEGKTIDQQIVDIISDRITALSVVFPK-IKFTING 224

Query: 260 HRVPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
               +K FAEY  M+           N+ + I +  S   F+QVS+VNG+    GG+H+D
Sbjct: 225 EVASMK-FAEYAKMFGDESLILE---NDNFSIAICNSPEGFRQVSYVNGLNIKNGGSHID 280

Query: 320 YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
           Y+ + +A+ ++  + +K+K    KA   +    + +   + N  FDSQTKE LT      
Sbjct: 281 YLVDGIADELIPSIKRKHKIEISKARIKECLTMIVIVRGMSNLRFDSQTKERLTNPLGEV 340

Query: 380 GSKCELSEEFL-KKVTAKSGIVETLLSWANFKQ-SKDLKKNDGTKTEDVRGISKLEDANL 437
            S  EL  + L K++     I+  ++  A  +  + +       +    +          
Sbjct: 341 KSHIELDFKKLGKQIMNNDAILMPIIEAALARHLAAEKAALTKAQKAAAKTKVAKHIKAG 400

Query: 438 AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
           + G  +++ TL LTEGDSA       LSV   +  G + LRGK++N      + VL N E
Sbjct: 401 SWGDTTKETTLFLTEGDSAIGYL---LSVRDSELHGGYALRGKVMNTWGMKGSDVLKNRE 457

Query: 498 IGNIKKILGL 507
           + +I  I+GL
Sbjct: 458 LADICAIMGL 467


>gi|395653084|gb|AFN69639.1| topoisomerase II large subunit [Aeromonas phage Aes012]
          Length = 514

 Score =  162 bits (410), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 226/490 (46%), Gaps = 54/490 (11%)

Query: 38  EHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRD 97
           EH++LRP+ Y+GS+       +++ +      ++++SYVPGL KI DEI+ N+ D   R 
Sbjct: 12  EHVILRPNMYVGSVAYEPHERFLFGK------YQSVSYVPGLVKIIDEIIDNSVDEGIRT 65

Query: 98  PKMDAVKVVIDQEHDL----ISVHNSGDGVPVEIHQEEGVYVPELI--FGHLLTSSNYDD 151
               A K  ID   DL    ++V ++G G+P  +       +P+ +  +   +  SN+DD
Sbjct: 66  DFKFANK--IDIRFDLLEGSVTVVDNGRGIPQSLVNTPDGEMPKPVAAWTQTMAGSNFDD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
              + + G NG G+ LTN FS  FI ET DGK                       C +G 
Sbjct: 124 T-NRVSMGMNGVGSSLTNFFSKTFIGETCDGKNFLTVT-----------------CSDGA 165

Query: 212 ---NW---------TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG 259
              NW         T V F PD   F    ++  +V ++  R+  L+    K +K  +NG
Sbjct: 166 SQVNWETKPGKIKGTSVYFIPDEKHFEGKTIDQQIVDIISDRITALSVVFPK-IKFTING 224

Query: 260 HRVPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVD 319
               +K FAEY  M+           N+ + I +  S   F+QVS+VNG+    GG+H+D
Sbjct: 225 EVASMK-FAEYAKMFGDESLILE---NDNFSIAICNSPEGFRQVSYVNGLNIKNGGSHID 280

Query: 320 YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSF 379
           Y+ + +A+ ++  + +K+K    KA   +    + +   + N  FDSQTKE LT      
Sbjct: 281 YLIDGIADELIPSIKRKHKIEISKARIKECLTMIVIVRGMSNLRFDSQTKERLTNPLGEV 340

Query: 380 GSKCELSEEFL-KKVTAKSGIVETLLSWANFKQ-SKDLKKNDGTKTEDVRGISKLEDANL 437
            S  EL  + L K++     I+  ++  A  +  + +       +    +          
Sbjct: 341 KSHIELDFKKLGKQIMNNDAILMPIIEAALARHLAAEKAALTKAQKAAAKTKVAKHIKAG 400

Query: 438 AGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSE 497
           + G  +++ TL LTEGDSA       LSV   +  G + LRGK++N      + VL N E
Sbjct: 401 SWGDTTKETTLFLTEGDSAIGYL---LSVRDSELHGGYALRGKVMNTWGMKGSDVLKNRE 457

Query: 498 IGNIKKILGL 507
           + +I  I+GL
Sbjct: 458 LADICAIMGL 467


>gi|311992510|ref|YP_004009378.1| gp60plus39 DNA topoisomerase subunit [Acinetobacter phage Ac42]
 gi|298684293|gb|ADI96254.1| gp60plus39 DNA topoisomerase subunit [Acinetobacter phage Ac42]
          Length = 608

 Score =  162 bits (409), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 188/670 (28%), Positives = 302/670 (45%), Gaps = 99/670 (14%)

Query: 38  EHILLRPDTYIGS--IEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQ 95
           EH L +P  YIGS  IE H +  +++ E      ++T+ YVPGL KI  E++ N+ D   
Sbjct: 13  EHALQKPAMYIGSTVIEPHER--FVFGE------YKTVEYVPGLIKIISELIDNSLDEAI 64

Query: 96  RDPKMDAVKVVIDQEHDLISVHNSGDGVPVE-IHQEEGVYVPELIFGHLLT--SSNYDDN 152
           R     A K+ +D     +++ ++G G+P + +   EG+ +P  +     T   SN+ ++
Sbjct: 65  RTDFEYANKISVDITGTSVTIKDNGRGIPQDNVITPEGITIPGPVAAWTRTKAGSNFGND 124

Query: 153 VKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN 212
             + T G NG G+ L NIFS +F   T +GK   +     + NM           ++G  
Sbjct: 125 ATRKTIGTNGVGSSLANIFSKKFTGHTCNGKTTIQVD--CSENMLNVDWKTGVGTRKG-- 180

Query: 213 WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            T V+ +PDL +F +T +  + + L+  ++  LA    K +K+  NG  +          
Sbjct: 181 -TTVTIEPDLERFGVTEIGKNEIDLIHDQLQTLAVIYPK-IKISFNGTILQGN------- 231

Query: 273 MYPKSVTRFHERV----NERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANH 328
            + K VT+F E      ++ + + +  S   F+ VSF NG+ T  GG H++ + +++++ 
Sbjct: 232 -FKKFVTQFEEDPIILESDTFSLALGRSPDGFRHVSFANGVHTKNGGNHIEVIFDELSSE 290

Query: 329 VMAVVNKKNKNANVKAHNVKNH--LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC--- 383
           +M  + +K K    KA  +K    + +FV  ++ N  FDSQTKE LT       S     
Sbjct: 291 LMNSIKRKYKIDITKAR-IKECVTMVLFVRDMV-NMRFDSQTKERLTSPMGEVKSHLNLD 348

Query: 384 --ELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED-----AN 436
             +L+  FLK  T    I+E +L       ++ L  +   +T+  +   K +      AN
Sbjct: 349 VKKLARMFLKNETVLMPIIEAVL-------ARKLAADKAAETKANKAAQKAKVAKHIKAN 401

Query: 437 LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
           L G + S   TL LTEGDSA       LS   RD  G +PLRGK  N    +  Q++ N 
Sbjct: 402 LYGDQ-SANTTLFLTEGDSAIGYL---LSTRNRDLHGGYPLRGKFKNTWGDAPAQIMKNQ 457

Query: 497 EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
           E  +I  I GL  G      +   Y ++ IMTD  +                        
Sbjct: 458 EAFDICAITGLTLG---EKAEETYYKNIAIMTDADV------------------------ 490

Query: 557 AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLS-FYSMPDYE 614
             D  GS    LL  F  S WP L +     ++F+ TP+    NK+ K  + +Y+  +Y+
Sbjct: 491 --DGTGSIYPTLLAFF--SNWPELFE--QGRIKFVKTPVWICENKSTKKQTWYYTSEEYD 544

Query: 615 AWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSK 674
             K     +     ++Y KGLG   S E  EY + I     D V   D   +  E+ F  
Sbjct: 545 LNKSKHLKD----KVRYIKGLG---SLEESEYERVINEPVMDVVSLPDNWKDQFEMLFGN 597

Query: 675 KKIEARKKWL 684
              + RK+W+
Sbjct: 598 DP-DKRKEWM 606


>gi|456351095|ref|YP_007501047.1| DNA topoisomerase II large subunit [Salmonella phage S16]
 gi|347466220|gb|AEO97006.1| DNA topoisomerase II large subunit [Salmonella phage S16]
          Length = 517

 Score =  161 bits (408), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 152/495 (30%), Positives = 233/495 (47%), Gaps = 34/495 (6%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEI 86
           IE   Q  S  EH+L RP  YIGS+       +++ E       + + YV G+ K+ DEI
Sbjct: 2   IENKIQMLSDKEHVLKRPGMYIGSVSNEFHERFVFGE------FKRVQYVAGVLKLIDEI 55

Query: 87  LVNAADNKQRDPKMDA--VKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHL 143
           + N+ D   R     A  + V ID     ++V ++G G+P   +   EG  +P  +    
Sbjct: 56  IDNSVDEAIRTSFKFANKISVNIDSSTSKVTVEDNGRGIPQAMVTTPEGEEIPGPVAAWT 115

Query: 144 LTSS--NYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSE 201
            T +  N+  + ++ TGG+NG G+ LTNIFS  F   T+DG+   +     +NN    S 
Sbjct: 116 KTKAGGNFGADEERKTGGQNGVGSSLTNIFSVMFKGTTSDGEN--ELTVSCSNNSDNVSW 173

Query: 202 PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
            +     +G   TKV F PD + F M + +D    +M  R+  LA    K ++ + N  +
Sbjct: 174 KSKKSSYKG---TKVEFIPDFSHFEMNNFDDVYFDIMLDRLQTLAVVYPK-IEFKFNNKK 229

Query: 262 VPVKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYV 321
           V   +F +Y   Y K+     E   E + + +  S   F+Q+++VN I T  GG+H+DYV
Sbjct: 230 VD-SNFKKYSKQYDKNAIIIDE---ENYSLAIGNSPDGFRQMTYVNNIHTKNGGSHIDYV 285

Query: 322 ANQVANHVMAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSF 379
            +++AN ++  + +K+K   V    +K    V  F+  +  N  FDSQTKE LT      
Sbjct: 286 IDEIANELIPAIKRKHK-IEVNKARIKECFTVLMFIRDM-SNLRFDSQTKERLTSPWGEI 343

Query: 380 GSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAG 439
            S   L  + +     KS  +   +  A   +    +K   TK       +K+     AG
Sbjct: 344 KSHLNLDAKKISNQIMKSDAILMPIIEAALARKLAAEKAAETKAAKKAAKAKVHKHIKAG 403

Query: 440 --GRNSEQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNVREASSNQVLNN 495
             G +  + TL LTEGDSA      G  +  RDR   G +PLRGK++N    S+   L N
Sbjct: 404 EYGNDKVETTLFLTEGDSA-----IGYLINTRDRALHGGYPLRGKVMNTWGMSAGDALKN 458

Query: 496 SEIGNIKKILGLKQG 510
            EI +I  I GL  G
Sbjct: 459 KEIFDICAITGLVIG 473


>gi|321447879|gb|EFX61225.1| hypothetical protein DAPPUDRAFT_274376 [Daphnia pulex]
          Length = 230

 Score =  161 bits (407), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 86/206 (41%), Positives = 121/206 (58%), Gaps = 9/206 (4%)

Query: 68  MIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEI 127
           MI R I Y PGL+KI DEIL+N   NK RDP+MD +++ ID   ++I  + +G G+P+  
Sbjct: 1   MIQREIIYTPGLWKIVDEILINDVRNKDRDPEMDTIQIDIDPIKNVIKFYYNGKGIPI-- 58

Query: 128 HQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKK 187
                 Y+P +IF  LL   N+ D  +  TGG N YGAKL NIFST F +ETA      +
Sbjct: 59  -----TYIPSMIFDPLLPDFNFYDGEETVTGGLNYYGAKLGNIFSTAFELETASKDLCLR 113

Query: 188 YKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG 247
           +KQ +T+NM     P + +   G N+TK +F PDL KF M  L  D +AL+ +R  ++A 
Sbjct: 114 FKQTWTDNMTLAETP-VVEPYSGPNYTKNTFSPDLDKFRMDSLNKDTIALLSRRAFEVAT 172

Query: 248 CLGKSVKVELNGHRVPVKSFAEYVDM 273
                V V LN   +P+ +F EY+D+
Sbjct: 173 S-TPGVNVYLNDKPLPINNFKEYLDL 197


>gi|326536158|ref|YP_004300588.1| gp60plus39 DNA topoisomerase subunit [Acinetobacter phage 133]
 gi|299483239|gb|ADJ19354.1| gp60plus39 DNA topoisomerase subunit [Acinetobacter phage 133]
          Length = 611

 Score =  160 bits (405), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 178/658 (27%), Positives = 293/658 (44%), Gaps = 77/658 (11%)

Query: 38  EHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRD 97
           EH L  P  Y+GS  +  Q L+I        ++    +  GL K+ +E  +N+ D   R 
Sbjct: 13  EHCLALPGMYVGSTAREAQELFI------DGVYGPQVFCTGLIKLVEETYINSLDEAIRT 66

Query: 98  PKMDAVKVVIDQEHDLISVHNSGDGVPVEIH-QEEGVYVPELIFGHLLTSS--NYDDNVK 154
               A K+ I+    + ++ ++G G+P  I   ++G  +P  +  + +  +  N+  + +
Sbjct: 67  NFKFANKIAINMTETVATIQDNGRGLPQNIVVDKDGAELPGAVVAYTVVKAGGNFGLDDR 126

Query: 155 KTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWT 214
           KT  G +G G  L NIF+ +F   T +G+   +     T+NM   S  + ++ K     T
Sbjct: 127 KT-AGMHGMGGSLANIFAKDFKAVTCNGEN--EISLHCTDNM---SNIDWTQKKAKYKGT 180

Query: 215 KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY 274
           KV F+PD  +F+ T   +  +A+++ ++  LA  +   ++ + NG ++   +F  Y   Y
Sbjct: 181 KVEFEPDFERFDCTGFTEIDMAIIRNQLQTLA-VVYPQIEFKFNGQKIQ-GNFKTYAKQY 238

Query: 275 PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVN 334
            +SV      V +  ++ +  SE  F+ +S+VN I T  GG+HVDY+ ++++N ++  + 
Sbjct: 239 DESVLT---SVTDNIQLGLARSEDGFRHLSYVNSIHTKVGGSHVDYIMDELSNELIPKIK 295

Query: 335 KKNKNANVKAHNVKNH--LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE-----LSE 387
           +K K   V    +K    L +F+  +  N  FDSQTKE LT          +     L+ 
Sbjct: 296 RKYK-ITVNKARIKECLTLLLFIKDM-SNLRFDSQTKERLTSPTGEVKKHVDIDIGKLAN 353

Query: 388 EFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCT 447
            F+K  T    I+E  L  A    ++   K           ++K   ANL G     + T
Sbjct: 354 SFMKNETILMPIIEAAL--AKQLAAEKSAKTKADNAAKKAKVAKHIKANLYG--KPAETT 409

Query: 448 LILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGL 507
           L LTEGDSA       LS   ++  G +PLRGK+LN    +  Q++ N E+ +I  I GL
Sbjct: 410 LFLTEGDSAIGYL---LSTRDQELHGGYPLRGKVLNTWGKTYPQMMANKELFDICAITGL 466

Query: 508 KQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKG 567
           K G   +  ++L Y ++ I  D                             D  GS    
Sbjct: 467 KLG---DKAENLNYKYIAIFVDSDF--------------------------DGLGSIYPS 497

Query: 568 LLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSW 627
           LL  F  S WP L +     +      V    K  + L FYSM +Y   +++L G    +
Sbjct: 498 LLAFF--SNWPELFEQGR--IRLCKAPVTIAVKGKEELFFYSMSEYNKVRDTLKG----Y 549

Query: 628 SIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLL 685
            + Y KGLGT T      Y + I     D +       E  E+ F K   + RK+W+L
Sbjct: 550 KVSYIKGLGTLTE---DNYSRVINNPVYDTIVLPPDYKEQFEMLFGKDP-DPRKEWML 603


>gi|312262428|gb|ADQ52723.1| gp60plus39 DNA topoisomerase subunit [Aeromonas phage PX29]
          Length = 614

 Score =  160 bits (404), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 177/659 (26%), Positives = 300/659 (45%), Gaps = 76/659 (11%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S  EH L+  D YIG+I      + +   + K + H   +YVPGL KI DE++ N  D  
Sbjct: 9   SDKEHCLINTDMYIGAISTEVHDVLV---DGKFVPH---AYVPGLVKITDEVIDNCVDEA 62

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQE-EGVYVPELIFGHLLTSSNYDDNV 153
            R     A ++ +  + + ++V ++G G+P +I +  EG  VP  +       +  + + 
Sbjct: 63  IRTSFEHANQIEVFIKDNQVTVKDNGRGLPQQIVKTPEGDEVPLPLAAWTRARAGSNFSA 122

Query: 154 KKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD-N 212
            + T G+NG G+ LTN FS  F+ ET +GK +   +   TNN  + S       KEG   
Sbjct: 123 DRKTIGKNGVGSALTNFFSDSFVGETGNGKSVVTVR--CTNNADEVS----YTTKEGKFK 176

Query: 213 WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVD 272
            T V+F PD  +F +  L+D    +++ R++ LA    + +  + NG +V  K F ++  
Sbjct: 177 GTVVTFVPDFTRFGVFQLDDQFEQVIQSRLITLAVNFPQ-ITFKYNGKKVESK-FNKFAA 234

Query: 273 MYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAV 332
            + + ++   + V+         +  +F+Q+SFVNG+ T +GG HV  + + +++ ++ +
Sbjct: 235 QFGEVISHNDDNVS-----LFIANSDEFRQLSFVNGVHTKQGGNHVTGIIDSLSDELIPM 289

Query: 333 VNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
           + +++K    KA  +K  L +  F+  LI  P +D QTKE L+   S       L  + L
Sbjct: 290 IKRQHKIEIPKAR-IKECLLIGLFIRDLI-APKYDGQTKERLSSPWSQIRDHMNLDYKAL 347

Query: 391 KKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLIL 450
            +   K+  V   +  +   + +   K   TK +     + +     A G    +  L L
Sbjct: 348 ARKMLKTPEVIDPIIESALAKKEAADKAAATKAQKKAKKANVAKHVKASGMGRVKTMLFL 407

Query: 451 TEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQG 510
            EGDSA             +  G +PLRGK+LNV +   ++VL N EI  +  IL     
Sbjct: 408 AEGDSAIG---PFTRFRNEETQGSYPLRGKMLNVWDLPDHEVLKNKEISELLGIL----N 460

Query: 511 VEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLI 570
           V+  + ++  Y  + IMTD                            QD  GS I  L I
Sbjct: 461 VDLRSKEAPAYSDIAIMTDA--------------------------DQDGKGS-IAMLAI 493

Query: 571 NFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSF-YSMPDYEAWKESLGGNASSWSI 629
            F + +WP   +       +I    +  + NGK   + YS  ++ A K       S W+ 
Sbjct: 494 AFFYKYWPQWFEQGRI---YIVRTPEYISTNGKKTDWSYSREEFRAKKFD-----SKWTH 545

Query: 630 KYYKGLGTSTSK----EGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
           ++ KGLG+ T +    E K+  +N+ L +   V  D +  E +E+ F K +   RK+WL
Sbjct: 546 RHIKGLGSLTVEGDDCEYKQCIENLVLEQ---VVVDSKTPELLEMLFGKDE-RKRKQWL 600


>gi|326536845|ref|YP_004300843.1| DNA topoisomerase II large subunit [Aeromonas phage 65]
 gi|312596865|gb|AAR90934.2| DNA topoisomerase II large subunit [Aeromonas phage 65]
          Length = 667

 Score =  158 bits (400), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 185/697 (26%), Positives = 314/697 (45%), Gaps = 88/697 (12%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S  EHI L  D Y+GS+ + T  +     E+   + +  +Y+PGL K+ DEI+ N+ D  
Sbjct: 10  SHYEHIFLNSDMYVGSLSEETHLVL----ENGKFVSK--NYIPGLAKVIDEIVDNSVDEA 63

Query: 95  QR-DPKM-DAVKVVIDQEHDLISVHNSGDGVP---VEIHQEEGVYVPELIFGHLLTSSNY 149
            R D K  + + +V+D + + +++ ++G G+P   V   + E V  P   +   +   N+
Sbjct: 64  IRTDFKYANKIDIVVDDQTNQVTISDNGRGIPQYDVTTPEGEVVPYPLACYTRAMAGGNF 123

Query: 150 DDNVKKTTG-GRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
              VK+  G G+NG G+ LTN++ST F   T DGK         T N   +S    +K K
Sbjct: 124 ---VKERKGIGKNGVGSVLTNLYSTMFRATTCDGKN--TVTIYCTQNAENQS---YTKKK 175

Query: 209 EGDNWTKVSFKPDLA-KFNM-THLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
            G   T V F PDL  KF +   + +D+V ++K RV ++   L   +K   N  +V  K 
Sbjct: 176 GGTQGTTVEFIPDLLDKFGIFGGIPNDIVDVIKSRV-EILSVLFPQIKFTFNKKKVDSKF 234

Query: 267 FAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVA 326
                D     +       NE+    +  S+ +F+Q+S+VNG+ T +GG HV+Y+ N + 
Sbjct: 235 KKFASDFGDPVIFE-----NEKCSFFIGTSD-EFRQLSYVNGVHTKQGGNHVEYLINGLC 288

Query: 327 NHVMAVVNKKNKNANVKAHNVKNHLWVFVNAL-IDNPAFDSQTKETLTLRQSSFGSKCEL 385
           + +  ++ +K K   +    +K +  +F++    +   FD QTKE L+         C +
Sbjct: 289 DELTPMIKRKFK-VEINKSRIKENTLIFMSLRGFEGAKFDGQTKERLSNSNGQIKDHCGI 347

Query: 386 S-EEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED---VRGISKLEDANLAGGR 441
             +   K++ +   ++  ++  A  K+   ++K   TK +       + K   AN  G +
Sbjct: 348 DLKAIAKRMISNDSVIMPIVESAIAKRDA-VEKALATKAQKKALTSNVPKHIQANKYGKK 406

Query: 442 NSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASS-NQVLNNSEIGN 500
             E   L LTEGDS  AL   G +    D  G FPLRGK+L+V + S   +VL N+EI N
Sbjct: 407 GFET-VLFLTEGDS--ALGFLG-ATRDHDTQGGFPLRGKMLSVHKISDKTKVLKNAEITN 462

Query: 501 IKKILG--LKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA--WITTF---- 552
           I  ILG  L    E  +    R G L++  +  ++    ++    +I    W        
Sbjct: 463 IISILGITLDDTKELPSGDFYRNGDLVVAENDEMIVNGKWVQTRDIITGNEWTHELKPDM 522

Query: 553 --------------------CFMLAQDHDG-SHIKGLLINFIHSFWPSLLKIPSFLV--- 588
                                 ++  D DG  HI  L+I+  H +W   +     LV   
Sbjct: 523 VHYRNQTNVRRNTAANYDYVSILVDADPDGRGHISNLIISLFHKYWKHYIDQGRLLVCRT 582

Query: 589 -EFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYF 647
            E+I      + K   V+  Y   ++   K +     + W  ++ KGLG    ++ K+  
Sbjct: 583 PEYI------SRKGKDVVWCYDTVEFNNKKFA----GTGWKHEHVKGLGQLNKEDYKKCI 632

Query: 648 QNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
           ++  + +   V  D   GE++E+ F  +  + RK W+
Sbjct: 633 RDPYMER---VSIDGSAGESLEMFFGNES-DLRKAWM 665


>gi|161622384|ref|YP_001595132.1| gp39 topoisomerase II large subunit N-terminal region
           [Enterobacteria phage JS98]
 gi|160213690|gb|ABX11029.1| gp39 topoisomerase II large subunit N-terminal region
           [Enterobacteria phage JS98]
          Length = 605

 Score =  158 bits (399), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 184/662 (27%), Positives = 283/662 (42%), Gaps = 79/662 (11%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S +EHI  R   YIGS        +++   ++      ++YVPGL K+ DEI+ N+ D  
Sbjct: 10  SDIEHIKKRSGMYIGSSANEAHGRFLFGNFTQ------VNYVPGLVKLIDEIIDNSVDEA 63

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  +++ +SV ++G G+P   +  + G  +P  +    +     N+ D
Sbjct: 64  IRTNFKFANKIDVQIKNNQVSVSDNGRGIPQAMVTDQNGEQIPGPVAAWTIPKAGGNFGD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
           + ++ TGG NG G+ LTNIFS  F   T+DG+      ++  N          S  K   
Sbjct: 124 DAERKTGGMNGVGSSLTNIFSVLFTGITSDGEN-----EITVNCSNGMENKGWSTKKSKG 178

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T V F PD + F    L    + +   R+  LA  +   ++   NG +V   +F +Y 
Sbjct: 179 KGTSVIFTPDFSHFEENSLSQIYLDITLDRLQTLA-VIYPDIQFTFNGKKVD-GNFKKYA 236

Query: 272 DMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
             + +    F  +  +   +  T S   F+Q+++VN I T  GG HV+ V + +  H++ 
Sbjct: 237 KQFGED---FVIQETDNVSMAFTPSPDGFRQLTYVNNIHTKNGGHHVECVFDDICEHLLP 293

Query: 332 VVNKKNKNANVKAHNVKNHL-WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
            + KK K   V    VK  L  V     + N  FDSQTKE LT   S FG      +   
Sbjct: 294 GIKKKYKGIEVTKARVKECLTMVMFIRDMSNMRFDSQTKERLT---SPFGEIRNHIQIDA 350

Query: 391 KKVTAKSGIVETLL------SWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSE 444
           KK+      V+ L+      + A    ++   +    K      + K   AN+ G     
Sbjct: 351 KKIATAILKVDGLIMPIVEAALARKLAAEKAAETKAAKKALKAKVHKHIKANMYG--KDA 408

Query: 445 QCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKI 504
             TL LTEGDSA       + V  +D  G +PLRGK++N    ++  ++ N E+ +I  I
Sbjct: 409 DTTLFLTEGDSAMG---PFIEVRNKDLQGGYPLRGKVMNTWGMTAADIMKNKELFDICAI 465

Query: 505 LGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSH 564
            GL  G   +      Y ++ IMTD  +                          D  GS 
Sbjct: 466 TGLVIGEPADKT---NYRNIAIMTDADV--------------------------DGTGSI 496

Query: 565 IKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLS-FYSMPDYEAWKESLGG 622
              LL  F  S WP L +     + F  TP++ A  + GK    FY +P Y   K+SL  
Sbjct: 497 YPSLLAFF--SQWPELFE--QGRIRFCKTPVIIA--QVGKEQEWFYDVPSYTKAKDSL-- 548

Query: 623 NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
                SI+Y KGLG   S E  EY + I   K D V   +   +  E+       + RK 
Sbjct: 549 --PKHSIRYIKGLG---SLEKAEYRRMIQDPKFDVVQLPEDWKDQFEMLLGNDP-QLRKA 602

Query: 683 WL 684
           W+
Sbjct: 603 WM 604


>gi|238695159|ref|YP_002922352.1| gp39 topoisomerase II, large subunit, N-terminal region
           [Enterobacteria phage JS10]
 gi|220029295|gb|ACL78229.1| gp39 topoisomerase II, large subunit, N-terminal region
           [Enterobacteria phage JS10]
          Length = 605

 Score =  157 bits (396), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 184/662 (27%), Positives = 282/662 (42%), Gaps = 79/662 (11%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S +EHI  R   YIGS        +++   ++      ++YVPGL K+ DEI+ N+ D  
Sbjct: 10  SDIEHIKKRSGMYIGSSANEAHGRFLFGNFTQ------VNYVPGLVKLIDEIIDNSVDEA 63

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  +++ +SV ++G G+P   +  + G  +P  +    +     N+ D
Sbjct: 64  IRTNFKFANKIDVQIKNNQVSVSDNGRGIPQAMVTDQNGEQIPGPVAAWTIPKAGGNFGD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
           + ++ TGG NG G+ LTNIFS  F   T+DG+      ++  N          S  K   
Sbjct: 124 DAERKTGGMNGVGSSLTNIFSVLFTGITSDGEN-----EITVNCSNGMENKGWSTKKSKG 178

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T V F PD   F    L    + +   R+  LA  +   ++   NG +V   +F +Y 
Sbjct: 179 KGTSVIFTPDFNHFEENSLSQIYLDITLDRLQTLA-VIYPDIQFTFNGKKVD-GNFKKYA 236

Query: 272 DMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
             + +    F  +  +   +  T S   F+Q+++VN I T  GG HV+ V + +  H++ 
Sbjct: 237 KQFGED---FVIQETDNVSMAFTPSPDGFRQLTYVNNIHTKNGGHHVECVFDDICEHLLP 293

Query: 332 VVNKKNKNANVKAHNVKNHL-WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL 390
            + KK K   V    VK  L  V     + N  FDSQTKE LT   S FG      +   
Sbjct: 294 GIKKKYKGIEVTKARVKECLTMVMFIRDMSNMRFDSQTKERLT---SPFGEIRNHIQIDA 350

Query: 391 KKVTAKSGIVETLL------SWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSE 444
           KK+      V+ L+      + A    ++   +    K      + K   AN+ G     
Sbjct: 351 KKIATAILKVDGLIMPIVEAALARKLAAEKAAETKAAKKALKAKVHKHIKANMYG--KDA 408

Query: 445 QCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKI 504
             TL LTEGDSA       + V  +D  G +PLRGK++N    ++  ++ N E+ +I  I
Sbjct: 409 DTTLFLTEGDSAMG---PFIEVRNKDLQGGYPLRGKVMNTWGMTAADIMKNKELFDICAI 465

Query: 505 LGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSH 564
            GL  G   +      Y ++ IMTD  +                          D  GS 
Sbjct: 466 TGLVIGEPADKT---NYRNIAIMTDADV--------------------------DGTGSI 496

Query: 565 IKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATNKNGKVLS-FYSMPDYEAWKESLGG 622
              LL  F  S WP L +     + F  TP++ A  + GK    FY +P Y   K+SL  
Sbjct: 497 YPSLLAFF--SQWPELFE--QGRIRFCKTPVIIA--QVGKEQEWFYDVPSYTKAKDSL-- 548

Query: 623 NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
                SI+Y KGLG   S E  EY + I   K D V   +   +  E+       + RK 
Sbjct: 549 --PKHSIRYIKGLG---SLEKAEYRRMIQDPKFDVVQLPEDWKDQFEMLLGNDP-QLRKA 602

Query: 683 WL 684
           W+
Sbjct: 603 WM 604


>gi|7500248|pir||T16227 hypothetical protein F31E8.6 - Caenorhabditis elegans
          Length = 270

 Score =  156 bits (395), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 119/344 (34%), Positives = 159/344 (46%), Gaps = 97/344 (28%)

Query: 114 ISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFST 173
           ISV+N+G G+PV  H+ E V+VPELIFG LLTSSNY+++ KK  GGRNGY AKL NIFS 
Sbjct: 21  ISVYNNGKGIPVTQHKVEKVFVPELIFGTLLTSSNYNNDEKKVAGGRNGYEAKLCNIFSN 80

Query: 174 EFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDD 233
           +F +ET+       +KQ + NNM +  EP I +  E D +TK++F PDL+KF M  L+D 
Sbjct: 81  KFTMETSFRDYKSAFKQTWINNMTRDEEPKIVESTEKD-FTKITFSPDLSKFKMKELDD- 138

Query: 234 VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNERWEICV 293
                     D + CL       L G                                 V
Sbjct: 139 -------LTSDGSSCL------SLAGG--------------------------------V 153

Query: 294 TLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK--NKNANVKAHNVKNHL 351
            LSE   QQVSFVN IAT KGG HVDYVA+Q+    +  + KK    + N+K        
Sbjct: 154 GLSEKGSQQVSFVNSIATTKGGRHVDYVADQMVTKFIDSIKKKLTKTSTNIKPF------ 207

Query: 352 WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQ 411
                                               +   K  ++ GI + +++   FK+
Sbjct: 208 ------------------------------------QKFSKAASRVGITDAVMTSVRFKR 231

Query: 412 SKDLKK-NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGD 454
             DL K     +T  ++ IS+L DAN AG   SE      T+GD
Sbjct: 232 MDDLNKMCSKPETSIMKDISRLVDANDAGTEKSE-----WTDGD 270


>gi|311992744|ref|YP_004009612.1| gp52 topoisomerase II medium subunit [Acinetobacter phage Ac42]
 gi|298684527|gb|ADI96488.1| gp52 topoisomerase II medium subunit [Acinetobacter phage Ac42]
          Length = 442

 Score =  156 bits (394), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 214/390 (54%), Gaps = 35/390 (8%)

Query: 708  KELILFSMADLQRSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEHSAY 764
            KE  ++++   QR+IP+M+DG+KP  R +L+ +    K +  K  K+A  +G V++ + Y
Sbjct: 16   KEYAIYTVE--QRAIPNMIDGMKPVHRFMLYRAMQLAKGDKEKMHKLASVAGGVAD-AGY 72

Query: 765  HHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFL 824
            HHGE S       MA  +  SNN   L   G FG+R    + AA++RYIF R+S     +
Sbjct: 73   HHGEGSAQDAGALMANTW--SNNFPFLDGEGNFGSRLV--QQAAASRYIFCRISENFSKV 128

Query: 825  FPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVR 884
            F KD++  +  ++ED +   P +Y+P+IP VL+NG EGI TG+++ I  ++ + ++   R
Sbjct: 129  F-KDEN--VAPVHEDPEHKPPRFYLPVIPVVLLNGVEGIATGYATNILPHSIKSVIECTR 185

Query: 885  RLLNG--EMMEPMHPWYRGFGGTIEKTASK-EAGVTYTVTGIIEEVNETTLRIKELPIRR 941
            + LNG  ++ EP    Y  F G I +   K E   TY +T      ++T + I E+P   
Sbjct: 186  QALNGVVDIKEP-SVEYPKFSGKIYRDGPKCELHGTYKIT------SKTQMEITEIP--- 235

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSDDTTVD---FEVFLSEESMMRTKQEG---LLKK 995
            ++ D  +++E ++D  +   +GF  YSD+   +   F++ + +E+ +   +E    ++K 
Sbjct: 236  YSFDRAKYVEKVLDPLED--KGFISYSDNCGKNGFGFKIKMRKEAGLELTEENHDKIMKM 293

Query: 996  FKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKL 1055
            F L   +S  N+ + D  G ++ +++  ++++ F  +R E+ +KR   ++   + +   L
Sbjct: 294  FGLIERLS-QNITVIDENGKLRVFESAVELIKHFVEVRTEYVKKRIHAKIIETDSKAKIL 352

Query: 1056 ENKVRFILGVVNGEIVVNNRKRTDLLLELR 1085
              K RFI  V+ G+IV+  + R  L+ EL+
Sbjct: 353  TAKARFINAVIKGDIVIAGKTRKQLVEELK 382


>gi|38639928|ref|NP_943883.1| topoisomerase II large subunit [Aeromonas phage Aeh1]
 gi|33414617|gb|AAQ17660.1| topoisomerase II large subunit [Aeromonas phage Aeh1]
          Length = 613

 Score =  155 bits (391), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 180/672 (26%), Positives = 308/672 (45%), Gaps = 86/672 (12%)

Query: 27  IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEI 86
           + + ++  S  EH L+  D YIGS    T  + +   + K +    I+YVPGL KI DE+
Sbjct: 1   MSQEFKVLSDKEHCLINTDMYIGSTSTETHDVLV---DGKFV---QIAYVPGLVKITDEV 54

Query: 87  LVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPV-EIHQEEGVYVPELIFGHLLT 145
           + N+ D   R     A ++ +  + + +SV ++G G+P   +   EGV VP  +      
Sbjct: 55  IDNSVDEAIRTNFEHANQIEVVIKDNQVSVKDNGRGLPQGMVVTPEGVEVPLPLAAWTRA 114

Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
            +  + +  + T G+NG G+ LTN FS  F+ ET +G      +   TNN  + S    +
Sbjct: 115 RAGSNFSADRKTIGKNGVGSALTNFFSDSFVGETGNGTNTVTVR--CTNNADEVSYTTKA 172

Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
              +G N   V+F PD  +F +  L++D   +++ R++ LA      +  + NG +V  K
Sbjct: 173 GKFKGTN---VTFVPDFTRFGVFQLDEDFEQVIQSRLLTLAVNF-PPITFKYNGKKVEGK 228

Query: 266 SFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQV 325
            F+++   +   V+   + V+    +    SE +++Q+SFVNG+ T +GG HV  V + +
Sbjct: 229 -FSKFAAQFGDVVSHNDDNVS----LFFATSE-EYRQLSFVNGVHTKQGGNHVYGVLDSL 282

Query: 326 ANHVMAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
           ++ ++ ++ +++K    KA  +K  L +  F+  L+  P +D QTKE L+   +      
Sbjct: 283 SDELIPMIKRQHKIEINKAR-IKECLLIGLFIRNLV-APKYDGQTKERLSSPWAQIRDHM 340

Query: 384 ELSEEFL-KKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
            L  + L +K+     +++ +++ +   + +   K   TK +     + +     A G  
Sbjct: 341 NLDYKALARKILKTPEVIDPIIA-SALAKKEAADKAAATKAQKKAKKANVAKHVAAAGLG 399

Query: 443 SEQCTLILTEGDSAKALAMAGLSVVGRDRF------GVFPLRGKLLNVREASSNQVLNNS 496
             +  L L EGDSA         +    RF      G +PLRGK+LNV     ++VL N 
Sbjct: 400 RLKTMLFLAEGDSA---------IGPFTRFRNEETQGSYPLRGKMLNVWNLPDHEVLKNK 450

Query: 497 EIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFML 556
           EI ++  IL     VE  + ++  Y  + IMTD                           
Sbjct: 451 EIADLLGIL----NVELRSKEAPAYTDIAIMTDA-------------------------- 480

Query: 557 AQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAW 616
            QD  GS I  L I F + FWP   +     +   TP   +TN      S YS  ++ + 
Sbjct: 481 DQDGKGS-IAMLAIAFFYKFWPHWFEQGRIHI-VRTPEYISTNGKKTDWS-YSRDEFRSK 537

Query: 617 KESLGGNASSWSIKYYKGLGTSTSK----EGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
           K         W+ ++ KGLG+ T +    E K+  +N+ L +   V  DDQ  E +E+ F
Sbjct: 538 KFD-----GKWTHRHIKGLGSLTVEGDDCEYKQCIENLVLEQ---VVIDDQTPELLEMLF 589

Query: 673 SKKKIEARKKWL 684
              +   RK+WL
Sbjct: 590 GDDE-HKRKQWL 600


>gi|242095812|ref|XP_002438396.1| hypothetical protein SORBIDRAFT_10g016352 [Sorghum bicolor]
 gi|241916619|gb|EER89763.1| hypothetical protein SORBIDRAFT_10g016352 [Sorghum bicolor]
          Length = 328

 Score =  154 bits (389), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/278 (35%), Positives = 159/278 (57%), Gaps = 24/278 (8%)

Query: 907  EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQ 966
            E T +K++GVTYT +GII+ V++TTL+I ELP++   ++Y + L++ +D  D FI+ + +
Sbjct: 12   ETTKTKKSGVTYTASGIIKVVDKTTLKISELPVKISMENYEKKLKTFMDGEDKFIKSYEK 71

Query: 967  YSDDTTVDFEVFLSE--ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
                  V   + L E  E++ R  +  L +KF+L T++ TSNMHL DS G+IK       
Sbjct: 72   KRGGNDVKIMIHLHENSENLARANEVDLQRKFELRTSMGTSNMHLLDSNGIIK------- 124

Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            IL+EF+ +RL FYEKRK+  +E    +L   +NKVRFI  V  GEI + +  +  L  +L
Sbjct: 125  ILKEFYALRLAFYEKRKQKLVEMAGRDLKMAQNKVRFIKAVRTGEIKLFDMDKEGLHTKL 184

Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
            R+  F  F +         A  + E ++  +   ++ G     YDYLL MA     +  V
Sbjct: 185  REMQFEEFEQ---------AKPSWENQDGAKAQGIIRG-----YDYLLFMATVNFIV-MV 229

Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
            + L A+ +   + + +L+K  P+ LW+KDL+A + +LD
Sbjct: 230  EELEAECEHQKKNISELKKTKPKELWLKDLNAFEEELD 267


>gi|414087237|ref|YP_006987424.1| DNA gyrase subunit B [Cronobacter phage vB_CsaM_GAP32]
 gi|378566071|gb|AFC21769.1| DNA gyrase subunit B [Cronobacter phage vB_CsaM_GAP32]
          Length = 655

 Score =  154 bits (388), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 170/693 (24%), Positives = 297/693 (42%), Gaps = 90/693 (12%)

Query: 28  EEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEIL 87
           E   Q+ ++ +H  +R + Y+GS  +H Q + ++ E+   +  + + +VP L   F EI+
Sbjct: 12  EHGVQQLTEYQHARIRTEMYLGSKSEHEQPVLLFGEDGYNV--QNLGWVPALLTSFREIV 69

Query: 88  VNAADNKQRDPKMDAVKVVIDQEHDL-ISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
            N+ D   +    D V  V+  E +L   + ++G G+P++   E   ++  ++   + T 
Sbjct: 70  DNSLDEFVKAGTKDPVLRVMYNEDELEFEISDNGRGIPIDYVPETQKHLCTMVLTEMKTG 129

Query: 147 SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETA-DGKRLK------------KYKQVFT 193
            N++D+ +    G NG G  +  I S +  +E    GK  K            K+ Q FT
Sbjct: 130 RNFNDDERNNVVGMNGLGGSVVMIVSEKAELEIHRTGKPYKTDKANTEYDGIYKFTQKFT 189

Query: 194 --NNMGKK---SEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGC 248
              NM  +    EP+I K K     T V FK   + F+   L   +V  + K +      
Sbjct: 190 EGTNMFPELGIEEPSIRKVKADKTGTTVRFKISKSVFHTHTLPTQLVYSILKEI----AA 245

Query: 249 LGKSVKVELNGHRVPVKS---FAEYVDMYPKSVTRFHERVNERWEICVTLSEG---QFQQ 302
              + K+ LN  R+ V     FA   +     V      ++  + I      G       
Sbjct: 246 ANPTYKIFLNDQRITVNKKGLFATTKNTMTLKVEDSEIGLDSTFYIVPNAVSGLSKNLHM 305

Query: 303 VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAH--NVKNHLWVFVNALID 360
              VN   +++GGTH+D    + A  V+  + +K+K   +  +  +V+  L ++    ++
Sbjct: 306 QGLVNNAPSLEGGTHLDTFQQKFALGVIKALERKSKQKKMTPNRSDVEEGLLIYNVTKMN 365

Query: 361 NPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSG--IVETLLSWANFKQSKDLKKN 418
            P F+SQ K  LT        +  L+EEF  ++  K+   + E     A     KD  ++
Sbjct: 366 TPTFNSQIKTKLTNENVIKPVQNALNEEFFNELVKKNSEWVEEIYARCAERTNKKDADED 425

Query: 419 DGTKTEDVRG-ISKLEDANLAGGRNSEQCTLILTEGDSA-KALAMAGLSVVGRDRFGVFP 476
                  ++G ++KL DAN   G N   C L++ EGDSA  ++  A  S +     G+ P
Sbjct: 426 RKMAKRLLKGKVAKLRDAN---GSNRMDCILLIAEGDSAVSSMTAARNSAI----HGILP 478

Query: 477 LRGKLLNVR-EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAP 535
           LRGK++NV  +  +  ++ +  + +I   L +  G E    +++ YG L I  D      
Sbjct: 479 LRGKIMNVNGKEKTKDLMASDALHDIMASLNIVPG-EKAIRENMNYGKLYICAD------ 531

Query: 536 LSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPS--FLVEFITP 593
                                 +D DG +I  L++NF++ FWP L +  S  F+  F TP
Sbjct: 532 ----------------------EDEDGKNIGALVVNFLYKFWPELFEDESNPFVYIFKTP 569

Query: 594 -IVKATNKNGKVLSFYSMPDY--EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNI 650
            I+    K  K    +++ +Y  E WK         W     KGLGT      ++   N 
Sbjct: 570 FIILEKGKESKYFYGHNVHEYNPEEWK--------GWKATRAKGLGTLEVSNFRDALANG 621

Query: 651 TLHKKDFVWEDDQDGEAIELAFSKKKIEARKKW 683
                  + +D    E ++L F+K++ + RK+W
Sbjct: 622 VAVA---IVDDGNLKETLDLIFNKERADDRKEW 651


>gi|310722598|ref|YP_003969421.1| unnamed protein product [Aeromonas phage phiAS5]
 gi|306021441|gb|ADM79975.1| topoisomerase II large subunit [Aeromonas phage phiAS5]
          Length = 614

 Score =  153 bits (387), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 177/658 (26%), Positives = 301/658 (45%), Gaps = 74/658 (11%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S  EH L+  D Y+GS+   T  + I  +       + ++YVPGL KI DE++ N+ D  
Sbjct: 9   SDKEHCLINTDMYVGSVSTETHDVLIDGK------FQPLTYVPGLVKITDEVIDNSVDEA 62

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVPV-EIHQEEGVYVPELIFGHLLTSSNYDDNV 153
            R     A  + I    + +SV ++G G+P   +   EG+ VP  +       +  + + 
Sbjct: 63  IRTNFEHANVIEITVADNKVSVKDNGRGLPQGTVVTPEGLEVPLPLAAWTRARAGSNFSA 122

Query: 154 KKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNW 213
            + T G+NG G+ LTN FS  FI ET +G+ +       TNN     E + S  K     
Sbjct: 123 DRKTIGKNGVGSALTNFFSDSFIGETGNGETVVTVS--CTNN---ADEVSYSVKKGKFKG 177

Query: 214 TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDM 273
           T V+F PD  +F + +L++D   ++K R++ LA    + V  + NG +V  K F ++   
Sbjct: 178 TVVTFVPDFTRFGVFNLDEDFEQVIKSRLITLAVNFPQ-VTFKYNGKKVDSK-FQKFAAQ 235

Query: 274 YPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVV 333
           +   V    + V+    +    SE +++Q+SFVNG+ T +GG HV  V + ++  ++ ++
Sbjct: 236 FGDVVCHNDDNVS----VFFGTSE-EYRQLSFVNGVHTKQGGNHVYGVLDSLSEELIPMI 290

Query: 334 NKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFL- 390
            +++K    KA  +K  L +  F+  L+  P +D QTKE L+   +       L  + L 
Sbjct: 291 KRQHKIEINKAR-IKECLIIGLFIRNLV-APKYDGQTKERLSSPWAQIRDHMNLDYKGLA 348

Query: 391 KKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLIL 450
           +K+     +++ +++ A  K+    K       +  +  +  +    A G    + TL L
Sbjct: 349 RKILKTPEVIDPIIASALAKKEAADKAAATKAQKKAKAANVAKHVK-ASGLGRTKTTLFL 407

Query: 451 TEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQG 510
            EGDSA       +     +  G +PLRGK+LNV   + ++VL N EI ++  IL     
Sbjct: 408 AEGDSAIG---PFIRFRNEESQGGYPLRGKMLNVWNLADHEVLKNKEISDLLGIL----N 460

Query: 511 VEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLI 570
           V+  + ++  Y ++ IMTD                            QD  GS I  L I
Sbjct: 461 VDLRSKEAPAYTNIAIMTDA--------------------------DQDGKGS-IAMLAI 493

Query: 571 NFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIK 630
            F + +WP   +     +   TP   +TN      S YS  ++ + K       S W+ +
Sbjct: 494 AFFYKYWPHWFEQGRIHI-VRTPEYISTNGKKTDWS-YSREEFRSKKFD-----SKWTHR 546

Query: 631 YYKGLGTSTSK----EGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
           + KGLGT T++    E K+  +N+ L +   +  D+     +E+ F   +   RK WL
Sbjct: 547 HIKGLGTLTTEGKNCEYKQCIENLVLEQ---IVIDEDTPAMLEMLFGDDE-SKRKTWL 600


>gi|395653309|gb|AFN69864.1| DNA topoisomerase II medium subunit [Aeromonas phage Aes012]
          Length = 544

 Score =  153 bits (387), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 230/484 (47%), Gaps = 62/484 (12%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            +N E + F+M  ++ R+IPS++DG KP QR  ++ +    K+N  K  KVA  +G VSE 
Sbjct: 109  INNEALEFAMYTVEERAIPSIIDGFKPVQRFFMYRALEYAKQNKTKFNKVAALAGGVSE- 167

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
            + YHHGE S AS    +A  +  +NNI +L+ +G FG+R    + AA+ RY+F R   + 
Sbjct: 168  AGYHHGEGSAASAGQLIANTW--NNNIPVLEGDGNFGSR--LVQQAAAPRYVFCR---VH 220

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            +  +    D  L  ++ D + + P +Y+P+IP VL NG +GI TG+++ I  ++   +V 
Sbjct: 221  QNFWDIYKDISLSPVHPDPEHLPPRFYLPVIPMVLANGVKGIATGYATTIFPHSYESLVK 280

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
                 + GE +      +  F G + +T SK    +  + G+ E V +T L I E+P+R 
Sbjct: 281  CTLAAVKGEEIPEPEVQFPCFKGIVRRTNSK----SIEIEGLYELVGQTKLIITEVPVRY 336

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMM--------RTKQEGLL 993
               +Y   L+ + +Q    I G+++ + D    FEV L  +               E ++
Sbjct: 337  DRLEYVSILDKLEEQGK--IVGYKEQTSD-GFRFEVTLKRQDKFGELMEKNPEVAHERII 393

Query: 994  KKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELL 1053
            K F L   +S  N+ + D  G + +Y+    ++ +F   R ++  +R   + E  E    
Sbjct: 394  KMFNLRQNLS-QNITVLDENGKLAEYECAADLIRDFVEYRKKYTNQRVNFEKEKAEYSRD 452

Query: 1054 KLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEES 1113
                K  F+  V+  +IV+  + +  L+ E++ K     P         +AG  +E    
Sbjct: 453  LAWAKFAFVNEVIEEKIVLRGKSKAQLIAEVKSK-----PN--------MAGFENE---- 495

Query: 1114 EENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKD 1173
                             L+ M+I  LT ++   L  +  K  +E +     TPE+ +VKD
Sbjct: 496  -----------------LVGMSIYRLTEDETHKLQEEALKQTKEYEYWSSTTPENEYVKD 538

Query: 1174 LDAL 1177
            L+ L
Sbjct: 539  LETL 542


>gi|310722215|ref|YP_003969039.1| unnamed protein product [Aeromonas phage phiAS4]
 gi|306021058|gb|ADM79593.1| DNA topoisomerase subunit [Aeromonas phage phiAS4]
          Length = 547

 Score =  152 bits (383), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 229/484 (47%), Gaps = 62/484 (12%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            +N E + F+M  ++ R+IPS++DG KP QR  ++ +    K+N  K  KVA  +G VSE 
Sbjct: 112  INNEALEFAMYTVEERAIPSIIDGFKPVQRFFMYRALEYAKQNKTKFNKVAALAGGVSE- 170

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
            + YHHGE S AS    +A  +  +NNI +L+ +G FG+R    + AA+ RY+F R   + 
Sbjct: 171  AGYHHGEGSAASAGQLIANTW--NNNIPVLEGDGNFGSR--LVQQAAAPRYVFCR---VH 223

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            +  +    D  L  ++ D + + P +Y+P+IP VL NG +GI TG+++ I  ++   +V 
Sbjct: 224  QNFWDIYKDISLSPVHPDPEHLPPRFYLPVIPMVLANGVKGIATGYATTIFPHSYESLVK 283

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
                 + GE +      +  F G + +  SK    +  + G+ E V +T L I E+P+R 
Sbjct: 284  CTLAAVKGEEIPEPEVQFPCFKGIVRRINSK----SIEIEGLYELVGQTKLIITEVPVRY 339

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMM--------RTKQEGLL 993
               +Y   L+ + +Q    I G+++ + D    FEV L  +               E ++
Sbjct: 340  DRLEYVSILDKLEEQGK--IVGYKEQTSD-GFRFEVTLKRQDKFGELMEKNPEVAHERII 396

Query: 994  KKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELL 1053
            K F L   +S  N+ + D  G + +Y+    ++ +F   R ++  +R   + E  E    
Sbjct: 397  KMFNLRQNLS-QNITVLDENGKLAEYECAADLIRDFVEYRKKYTNQRVIFEKEKAEYSRD 455

Query: 1054 KLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEES 1113
                K  F+  V+  +IV+  + +  L+ E++ K     P         +AG  +E    
Sbjct: 456  LAWAKFAFVNEVIEEKIVLRGKSKAQLIAEVKSK-----PN--------MAGFENE---- 498

Query: 1114 EENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKD 1173
                             L+ M+I  LT ++   L  +  K  +E D     TPE+ +VKD
Sbjct: 499  -----------------LVGMSIYRLTEDETHKLQEEALKQTKEYDYWSSTTPENEYVKD 541

Query: 1174 LDAL 1177
            L+ L
Sbjct: 542  LETL 545


>gi|294338122|emb|CBJ93960.1| Possible DNA topoisomerase (medium subunit) [Campylobacter phage
            CP220]
          Length = 442

 Score =  152 bits (383), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 227/479 (47%), Gaps = 56/479 (11%)

Query: 704  DFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSA 763
            D+   EL  +S     R I S +DGLK   RKI+  +  +    E KV+ F   V  ++ 
Sbjct: 8    DYFLNELTNYSCYSTLRMIASSIDGLKNSSRKIINTALDKKLNTETKVSIFDNMVQSYTQ 67

Query: 764  YHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRF 823
            Y HG  S A  I  MA  + GSNNI LL+  G FG+R     + A+ RY++ +       
Sbjct: 68   YLHG--SCAGVIQNMAASYTGSNNIPLLEGKGNFGSR--FINEPAAPRYVYVKNKKYIND 123

Query: 824  LFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGS-EGIGTGWSSYIPNYNPRDIVAN 882
            LF   D  +L   N +G +IEP +Y+P +P +++NGS  G+ +G+     N  PR + + 
Sbjct: 124  LFDIKD--VLISQNFEGSEIEPVFYVPSLPILVLNGSMNGLASGFKQ---NILPRSLDSV 178

Query: 883  VRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVT-YTVTGIIEEVNETTLRIKELPIRR 941
            ++ +  G+ ++ + P+  GF GT+E      +  T +   G++E VN+    I E+P   
Sbjct: 179  IKYIKTGKKVD-LKPYIAGFKGTVELVEDASSNNTQWNFIGVVE-VNKNKAIITEIPPFI 236

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFE---VFLSEESMMRTKQEGLLKKFKL 998
                Y E L+++++     I+ ++  SD    +F+   +F   +++ + K   +LK  K 
Sbjct: 237  EYTKYLEILDNLVESKK--IKNYKDLSDQRNQEFKFEVIFF--DNISKDKAIDILKLSKR 292

Query: 999  TTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENK 1058
             T I  +     D    ++ ++  E I++ +  +R  F  K+K   L+ LE +L     K
Sbjct: 293  ETEIYNA----LDENNQVRTFENIESIIDYYIDVRKRFLIKQKDFDLKVLENDLNINVQK 348

Query: 1059 VRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPE 1118
            +RF+  +++ E+ +  R + D+ L+L  KGF  F                  E+S     
Sbjct: 349  LRFVKLIIDSELQIMKRSKKDIELDLESKGFIKF------------------EDS----- 385

Query: 1119 VVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
                     YDYLL + I + T E  + L+ +  ++  + + L+       +V+ LD++
Sbjct: 386  ---------YDYLLKLPIHSFTNETFEKLVQNAKEIKAKFETLKNLDTFKNYVESLDSI 435


>gi|403252574|ref|ZP_10918883.1| DNA gyrase subunit B [Thermotoga sp. EMP]
 gi|402812064|gb|EJX26544.1| DNA gyrase subunit B [Thermotoga sp. EMP]
          Length = 636

 Score =  152 bits (383), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 170/634 (26%), Positives = 269/634 (42%), Gaps = 107/634 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE + +RP  YIGS  K                        GL+ +  E++ N+ D    
Sbjct: 15  LEPVRMRPGMYIGSTGKR-----------------------GLHHLVYEVVDNSVDEALA 51

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D ++V +  E   + + ++G G+PV+IH EEG    E++F  L     +  +  K 
Sbjct: 52  G-YCDWIRVTL-HEDGSVEIEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKFSKDSYKI 109

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTK 215
           +GG +G G  + N  S    +    DG   K Y+Q +    GK   P     +   + T 
Sbjct: 110 SGGLHGVGVSVVNALSEWLEVRVHRDG---KIYRQRYER--GKPVTPVEVIGETDKHGTI 164

Query: 216 VSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK---SFAEYVD 272
           V FKPD   F+ T  + D++    + +  L   L    +  +NG +   K      EYV 
Sbjct: 165 VRFKPDPLIFSETEFDPDILEHRLREIAFLVPGLKIEFEDRINGEKKTFKFDGGIVEYVK 224

Query: 273 MYPKSVTRFHERVN-ERWEICVT-------LSEGQFQQ--------VSFVNGIATIKGGT 316
              +     H+ ++ +R E   T       + E  FQ         VSF N I T+ GGT
Sbjct: 225 YLNRGKKALHDVIHIKRTEKVKTKNGEDEVIVEIAFQYTDSYSEDIVSFANTIKTVDGGT 284

Query: 317 HVDYVANQVANHVMAVVNKKN---KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
           HV    + +   +     K N   K+ + +  +V+  L   ++  + NP F+ QTK  L 
Sbjct: 285 HVTAFKSTLTRLMNEYGKKHNFLKKDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLG 344

Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLS-WANFKQSKDLKKNDGTKTEDVRGISKL 432
             +        + EE  K   A   +V+T+LS   + KQ+++  K      E VR  + L
Sbjct: 345 NEEVKEAVTKAMREELKKIFDANPELVKTILSKIMSTKQAREAAKR---AREMVRRKNVL 401

Query: 433 EDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNV 484
           ++  L G        N E+  L + EGDSA      G +   RDR    V P+RGK+LNV
Sbjct: 402 QNTTLPGKLADCSSTNREKTELFIVEGDSA-----GGSAKQARDREFQAVLPIRGKILNV 456

Query: 485 REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            ++S +++L N +I +I   +G   G +++  K LRYG ++IMTD               
Sbjct: 457 EKSSLDRLLKNEQISDIIVAVGTGIGDDFDESK-LRYGRIIIMTD--------------- 500

Query: 545 IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV 604
                         D DG+HI+ LL+   + +   L++     +  + P+ +   K GK 
Sbjct: 501 -------------ADIDGAHIRTLLLTLFYRYMRPLIEQGRIYIA-LPPLYRI--KAGKE 544

Query: 605 LSFYSMPDYE--AWKESLGGNASSWSIKYYKGLG 636
             FY   D E   +KE L G      I+ YKGLG
Sbjct: 545 -EFYVYSDQELAEYKEKLQGK--RIEIQRYKGLG 575


>gi|333494604|gb|AEF56840.1| gp52 DNA topoisomerase II [Campylobacter phage vB_CcoM-IBB_35]
          Length = 442

 Score =  151 bits (382), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 225/479 (46%), Gaps = 56/479 (11%)

Query: 704  DFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSA 763
            D+   EL  +S     R I S +DGLK   RKI+  +  +    E KV+ F   V  ++ 
Sbjct: 8    DYFLNELTNYSCYSTLRMIASSIDGLKNSSRKIINTALDKKLNTETKVSIFDNMVQSYTQ 67

Query: 764  YHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRF 823
            Y HG  S +  I  MA  + GSNNI LL+  G FG+R     + A+ RY++ +       
Sbjct: 68   YLHG--SCSGVIQNMAASYTGSNNIPLLEGKGNFGSR--FINEPAAPRYVYVKNKKYIND 123

Query: 824  LFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGS-EGIGTGWSSYIPNYNPRDIVAN 882
            LF   D  +L   N +G +IEP +Y+P +P +++NGS  G+ +G+     N  PR + + 
Sbjct: 124  LFDIKD--VLISQNFEGSEIEPVFYVPSLPILVLNGSMNGLASGFKQ---NILPRSLDSV 178

Query: 883  VRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVT-YTVTGIIEEVNETTLRIKELPIRR 941
            ++ +  G+ ++ + P+  GF GT+E      +  T +   G++E VN+    I E+P   
Sbjct: 179  IKYIKTGKKVD-LKPYIAGFKGTVELVEDASSNNTQWNFIGVVE-VNKNKAIITEIPPFI 236

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFE---VFLSEESMMRTKQEGLLKKFKL 998
                Y E L+++I+     I+ ++  SD    +F+   +F   +++ + K   +LK  K 
Sbjct: 237  EYTKYLEILDNLIESKK--IKNYKDLSDQRNQEFKFEVIFF--DNISKDKAIDILKLSKR 292

Query: 999  TTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENK 1058
             T I  +     D    +K +   E I++ +  +R  F  K+K   L+ LE +L     K
Sbjct: 293  ETEIYNA----LDENNQVKTFKNIESIIDYYIDVRKRFLIKQKDFDLKVLENDLNINVQK 348

Query: 1059 VRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPE 1118
            +RF+  +++ E+ +  R + D+ L+L  KGF  F  +                       
Sbjct: 349  LRFVKLIIDSELQIMKRSKKDIELDLENKGFIKFDGS----------------------- 385

Query: 1119 VVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
                     YDYLL + I + T E  + L+ +  ++  + ++L+       +V+ LD++
Sbjct: 386  ---------YDYLLKLPIHSFTNETFEKLVQNAKEIKAKFEELKNLDTFKNYVESLDSI 435


>gi|423262315|ref|YP_007010914.1| DNA topoisomerase subunit [Aeromonas phage Aes508]
 gi|402762193|gb|AFQ97307.1| DNA topoisomerase subunit [Aeromonas phage Aes508]
          Length = 544

 Score =  151 bits (382), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 229/484 (47%), Gaps = 62/484 (12%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            +N E + F+M  ++ R+IPS++DG KP QR  ++ +    K+N  K  KVA  +G VSE 
Sbjct: 109  INNEALEFAMYTVEERAIPSIIDGFKPVQRFFMYRALEYAKQNKTKFNKVAALAGGVSE- 167

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
            + YHHGE S AS    +A  +  +NNI +L+ +G FG+R    + AA+ RY+F R   + 
Sbjct: 168  AGYHHGEGSAASAGQLIANTW--NNNIPVLEGDGNFGSR--LVQQAAAPRYVFCR---VH 220

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            +  +    D  L  ++ D + + P +Y+P+IP VL NG +GI TG+++ I  ++   +V 
Sbjct: 221  QNFWDIYKDISLSPVHPDPEHLPPRFYLPVIPMVLANGVKGIATGYATTIFPHSYESLVK 280

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
                 + GE +      +  F G + +  SK    +  + G+ E V +T L I E+P+R 
Sbjct: 281  CTLAAVKGEEIPEPEVQFPCFKGIVRRINSK----SIEIEGLYELVGQTKLIITEVPVRY 336

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMM--------RTKQEGLL 993
               +Y   L+ + +Q    I G+++ + D    FEV L  +               E ++
Sbjct: 337  DRLEYVSILDKLEEQGK--IVGYKEQTSD-GFRFEVTLKRQDKFGELMEKNPEVAHERII 393

Query: 994  KKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELL 1053
            K F L   +S  N+ + D  G + +Y+    ++ +F   R ++  +R   + E  E    
Sbjct: 394  KMFNLRQNLS-QNITVLDENGKLAEYECAADLIRDFVEYRKKYTNQRVNFEKEKAEYSRD 452

Query: 1054 KLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEES 1113
                K  F+  V+  +IV+  + +  L+ E++ K     P         +AG  +E    
Sbjct: 453  LAWAKFAFVNEVIEEKIVLRGKSKAQLIAEVKSK-----PN--------MAGFENE---- 495

Query: 1114 EENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKD 1173
                             L+ M+I  LT ++   L  +  K  +E +     TPE+ +VKD
Sbjct: 496  -----------------LVGMSIYRLTEDETHKLQEEALKQTKEYEYWSSTTPENEYVKD 538

Query: 1174 LDAL 1177
            L+ L
Sbjct: 539  LETL 542


>gi|294338321|emb|CBJ94360.1| Possible DNA topoisomerase (medium subunit) [Campylobacter phage
            CPt10]
          Length = 442

 Score =  151 bits (381), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 227/479 (47%), Gaps = 56/479 (11%)

Query: 704  DFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSA 763
            D+   EL  +S     R I S +DGLK   RKI+  +  +    E KV+ F   V  ++ 
Sbjct: 8    DYFLNELTNYSCYSTLRMIASSIDGLKNSSRKIINTALDKKLNTETKVSIFDNMVQSYTQ 67

Query: 764  YHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRF 823
            Y HG  S +  I  MA  + GSNNI LL+  G FG+R     + A+ RY++ +       
Sbjct: 68   YLHG--SCSGVIQNMAASYTGSNNIPLLEGKGNFGSR--FINEPAAPRYVYVKNKKYIND 123

Query: 824  LFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGS-EGIGTGWSSYIPNYNPRDIVAN 882
            LF   D  +L   N +G +IEP +Y+P +P +++NGS  G+ +G+     N  PR + + 
Sbjct: 124  LFDIKD--VLISQNFEGSEIEPVFYVPSLPILVLNGSMNGLASGFKQ---NILPRSLDSV 178

Query: 883  VRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVT-YTVTGIIEEVNETTLRIKELPIRR 941
            ++ +  G+ ++ + P+  GF GT+E      +  T +   G++E VN+    I E+P   
Sbjct: 179  IKYIKTGKKVD-LKPYIAGFKGTVELVEDASSNNTQWNFIGVVE-VNKNKAIITEIPPFI 236

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFE---VFLSEESMMRTKQEGLLKKFKL 998
                Y E L+++I+     I+ ++  SD    +F+   +F   +++ + K   +LK  K 
Sbjct: 237  EYTKYLEILDNLIESKK--IKNYKDLSDQRNQEFKFEVIFF--DNISKDKAIDILKLSKR 292

Query: 999  TTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENK 1058
             T I  +     D    ++ ++  E I++ +  +R  F  K+K   L+ LE +L     K
Sbjct: 293  ETEIYNA----LDENNQVRTFENIESIIDYYIDVRKRFLIKQKDFDLKVLENDLNINVQK 348

Query: 1059 VRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPE 1118
            +RF+  +++ E+ +  R + D+ L+L  KGF  F                  E+S     
Sbjct: 349  LRFVKLIIDSELQIMKRSKKDIELDLESKGFIKF------------------EDS----- 385

Query: 1119 VVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
                     YDYLL + I + T E  + L+ +  ++  + + L+       +V+ LD++
Sbjct: 386  ---------YDYLLKLPIHSFTNETFEKLVQNAKEIKAKFETLKNLDTFKNYVESLDSI 435


>gi|401825025|gb|AFQ22715.1| DNA topoisomerase [Stenotrophomonas phage IME13]
          Length = 452

 Score =  150 bits (380), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 228/484 (47%), Gaps = 62/484 (12%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            +N E + F+M  ++ R+IPS++DG KP QR  ++ +    K+N  K  KVA  +G VSE 
Sbjct: 17   INNEALEFAMYTVEERAIPSIIDGFKPVQRFFMYRALEYAKQNKTKFNKVAALAGGVSE- 75

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
            + YHHGE S AS    +A  +  +NNI +L+ +G FG+R    + AA+ RY+F R   + 
Sbjct: 76   AGYHHGEGSAASAGQLIANTW--NNNIPVLEGDGNFGSRLV--QQAAAPRYVFCR---VH 128

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            +  +    D  L  ++ D + + P +Y+P+IP VL NG +GI TG+++ I  ++   +V 
Sbjct: 129  QNFWDIYKDISLSPVHPDPEHLPPRFYLPVIPMVLANGVKGIATGYATTIFPHSYESLVK 188

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
                 + GE +      +  F G + +  SK    +  + G+ E V +T L I E+P+R 
Sbjct: 189  CTLAAVKGEEIPEPEVQFPCFKGIVRRINSK----SIEIEGLYELVGQTKLIITEVPVRY 244

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMM--------RTKQEGLL 993
               +Y   L+ + +Q    I G+++ + D    FEV L  +               E ++
Sbjct: 245  DRLEYVSILDKLEEQGK--IVGYKEQTSD-GFRFEVTLKRQDKFGELMEKNPEVAHERII 301

Query: 994  KKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELL 1053
            K F L   +S  N+ + D  G + +Y+    ++ +F   R ++  +R   + E  E    
Sbjct: 302  KMFNLRQNLS-QNITVLDENGKLAEYECAADLIRDFVEYRKKYTNQRVIFEKEKAEYSRD 360

Query: 1054 KLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEES 1113
                K  F+  V+  +IV+  + +  L+ E++ K               +AG  +E    
Sbjct: 361  LAWAKFAFVNEVIEEKIVLRGKSKAQLIAEVKSK-------------PTMAGFENE---- 403

Query: 1114 EENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKD 1173
                             L+ M+I  LT ++   L  +  K  +E +     TPE+ +VKD
Sbjct: 404  -----------------LVGMSIYRLTEDETHKLQEEALKQTKEYEYWSSTTPENEYVKD 446

Query: 1174 LDAL 1177
            L+ L
Sbjct: 447  LETL 450


>gi|109290217|ref|YP_656466.1| gp52 DNA topoisomerase subunit [Aeromonas phage 25]
 gi|104345890|gb|ABF72790.1| gp52 DNA topoisomerase subunit [Aeromonas phage 25]
          Length = 544

 Score =  150 bits (378), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 131/484 (27%), Positives = 227/484 (46%), Gaps = 62/484 (12%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            +N E + F+M  ++ R+IPS++DG KP QR  ++ +    K+N  K  KVA  +G VSE 
Sbjct: 109  INNEALEFAMYTVEERAIPSIIDGFKPVQRFFMYRALEYAKQNKTKFNKVAALAGGVSE- 167

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
            + YHHGE S A     +A  +  +NNI +L+ +G FG+R    + AA+ RY+F R   + 
Sbjct: 168  AGYHHGEGSAAGAGQLIANTW--NNNIPVLEGDGNFGSR--LVQQAAAPRYVFCR---VH 220

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            +  +    D  L  ++ D + + P +Y+P+IP VL NG +GI TG+++ I  ++   +V 
Sbjct: 221  QNFWDIYKDISLSPVHPDPEHLPPRFYLPVIPMVLANGVKGIATGYATTIFPHSYESLVK 280

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
                 + GE +      +  F G + +  SK    +  + G+ E V +T L I E+P+R 
Sbjct: 281  CTLAAVKGEEIPEPEVQFPCFKGIVRRINSK----SIEIEGLYELVGQTKLIITEVPVRY 336

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMM--------RTKQEGLL 993
               +Y   L+ + +Q    I G+++ + D    FEV L  +               E ++
Sbjct: 337  DRLEYVSILDKLEEQGK--IVGYKEQTSD-GFRFEVTLKRQDKFGELMEKNPEVAHERII 393

Query: 994  KKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELL 1053
            K F L   +S  N+ + D  G + +Y+    ++ +F   R ++  +R   + E  E    
Sbjct: 394  KMFNLRQNLS-QNITVLDENGKLAEYECAADLIRDFVEHRKKYTNQRVIFEKEKAEYSRD 452

Query: 1054 KLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEES 1113
                K  F+  V+  +IV+  + +  L+ E++ K               +AG  +E    
Sbjct: 453  LAWAKFAFVNEVIEEKIVLRGKSKAQLIAEVKSK-------------PNMAGFENE---- 495

Query: 1114 EENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKD 1173
                             L+ M+I  LT ++   L  +  K  +E D     TPE+ +VKD
Sbjct: 496  -----------------LVGMSIYRLTEDETHKLQEEALKQTKEYDYWSNTTPENEYVKD 538

Query: 1174 LDAL 1177
            L+ L
Sbjct: 539  LETL 542


>gi|1622792|gb|AAC44498.1| DNA topoisomerase II subunit B [Thermotoga maritima MSB8]
          Length = 636

 Score =  150 bits (378), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 169/634 (26%), Positives = 269/634 (42%), Gaps = 107/634 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE + +RP  YIGS  K                        GL+ +  E++ N+ D    
Sbjct: 15  LEPVRMRPGMYIGSTGKR-----------------------GLHHLVYEVVDNSVDEALA 51

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D ++V +  E   + V ++G G+PV+IH EEG    E++F  L     +  +  K 
Sbjct: 52  G-YCDWIRVTL-HEDGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKFSKDSYKI 109

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTK 215
           +GG +G G  + N  S    +    DG   K Y+Q +    GK   P     +   + T 
Sbjct: 110 SGGLHGVGVSVVNALSEWLEVRVHRDG---KIYRQRYER--GKPVTPMEVIGETDKHGTI 164

Query: 216 VSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK---SFAEYVD 272
           V FKPD   F+ T  + D++    + +  L   L    +  +NG +   K      EYV 
Sbjct: 165 VRFKPDPLIFSETEFDPDILEHRLREIAFLVPGLKIEFEDRINGEKKTFKFDGGIVEYVK 224

Query: 273 MYPKSVTRFHERVN-ERWEICVT-------LSEGQFQQ--------VSFVNGIATIKGGT 316
              +     H+ ++ +R E   T       + E  FQ         VSF N I T+ GGT
Sbjct: 225 YLNRGKKALHDVIHIKRTEKVKTKNGEDEVIVEIAFQYTDSYSEDIVSFANTIKTVDGGT 284

Query: 317 HVDYVANQVANHVMAVVNKKN---KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
           HV    + +   +     K N   K+ + +  +V+  L   ++  + NP F+ QTK  L 
Sbjct: 285 HVTAFKSTLTRLMNEYGKKHNFLKKDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLG 344

Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLS-WANFKQSKDLKKNDGTKTEDVRGISKL 432
             +        + EE  K   A   +V+T+LS   + KQ+++  K      E VR  + L
Sbjct: 345 NEEVKEAVTKAMREELKKIFDANPELVKTILSKIMSTKQAREAAKR---AREMVRRKNVL 401

Query: 433 EDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNV 484
           ++  L G        + E+  L + EGDSA      G +   RDR    V P+RGK+LNV
Sbjct: 402 QNTTLPGKLADCSSTHREKTELFIVEGDSA-----GGSAKQARDREFQAVLPIRGKILNV 456

Query: 485 REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            ++S +++L N +I +I   +G   G +++  K LRYG ++IMTD               
Sbjct: 457 EKSSLDRLLKNEQISDIIVAVGTGIGDDFDESK-LRYGRIIIMTD--------------- 500

Query: 545 IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV 604
                         D DG+HI+ LL+   + +   L++     +  + P+ +   K G+ 
Sbjct: 501 -------------ADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIA-LPPLYRI--KAGRE 544

Query: 605 LSFYSMPDYE--AWKESLGGNASSWSIKYYKGLG 636
             FY   D E   +KE L G      I+ YKGLG
Sbjct: 545 -EFYVYSDQELAEYKEKLQGK--RIEIQRYKGLG 575


>gi|170287901|ref|YP_001738139.1| DNA gyrase subunit B [Thermotoga sp. RQ2]
 gi|170175404|gb|ACB08456.1| DNA gyrase, B subunit [Thermotoga sp. RQ2]
          Length = 636

 Score =  149 bits (377), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 169/634 (26%), Positives = 268/634 (42%), Gaps = 107/634 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE + +RP  YIGS  K      +YE    ++               DE+L    D    
Sbjct: 15  LEPVRMRPGMYIGSTGKRGLHHLVYEVVDNSV---------------DEVLAGYCD---- 55

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
                 ++V +  E   + V ++G G+PV+IH EEG    E++F  L     +  +  K 
Sbjct: 56  -----WIRVTL-HEDGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKFSKDSYKI 109

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTK 215
           +GG +G G  + N  S    +    DG   K Y+Q +    GK   P     +   + T 
Sbjct: 110 SGGLHGVGVSVVNALSEWLEVRVHRDG---KIYRQRYER--GKPVTPVEVIGETDKHGTI 164

Query: 216 VSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK---SFAEYVD 272
           V FKPD   F+ T  + D++    + +  L   L    +  +NG +   K      EYV 
Sbjct: 165 VRFKPDPLIFSETEFDPDILEHRLREIAFLVPGLKIEFEDRINGEKKTFKFDGGIVEYVK 224

Query: 273 MYPKSVTRFHERVN-ERWEICVT-------LSEGQFQQ--------VSFVNGIATIKGGT 316
              +     H+ ++ +R E   T       + E  FQ         VSF N I T+ GGT
Sbjct: 225 YLNRGKKALHDVIHIKRTEKVKTKNGEDEVIVEIAFQYTDSYSEDIVSFANTIKTVDGGT 284

Query: 317 HVDYVANQVANHVMAVVNKKN---KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
           HV    + +   +     K N   K+ + +  +V+  L   ++  + NP F+ QTK  L 
Sbjct: 285 HVTAFKSTLTRLMNEYGKKHNFLKKDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLG 344

Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLS-WANFKQSKDLKKNDGTKTEDVRGISKL 432
             +        + EE  K   A   +V+T+LS   + KQ+++  K      E VR  + L
Sbjct: 345 NEEVKEAVTKAMREELKKIFDANPELVKTILSKIMSTKQAREAAKR---AREMVRRKNVL 401

Query: 433 EDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNV 484
           ++  L G        + E+  L + EGDSA      G +   RDR    V P+RGK+LNV
Sbjct: 402 QNTTLPGKLADCSSTHREKTELFIVEGDSA-----GGSAKQARDREFQAVLPIRGKILNV 456

Query: 485 REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            ++S +++L N +I +I   +G   G +++  K LRYG ++IMTD               
Sbjct: 457 EKSSLDRLLKNEQISDIIVAVGTGIGDDFDESK-LRYGRIIIMTD--------------- 500

Query: 545 IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV 604
                         D DG+HI+ LL+   + +   L++     +  + P+ +   K G+ 
Sbjct: 501 -------------ADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIA-LPPLYRI--KAGRE 544

Query: 605 LSFYSMPDYE--AWKESLGGNASSWSIKYYKGLG 636
             FY   D E   +KE L G      I+ YKGLG
Sbjct: 545 -EFYVYSDQELAEYKEKLQGK--RIEIQRYKGLG 575


>gi|395653403|gb|AFN69948.1| DNA topoisomerase subunit [Aeromonas phage Aes516]
          Length = 545

 Score =  149 bits (377), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 199/394 (50%), Gaps = 28/394 (7%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            +N E + F+M  ++ R+IPS++DG KP QR  ++ +    K+N  K  KVA  +G VSE 
Sbjct: 109  INNEALEFAMYTVEERAIPSIIDGFKPVQRFFMYRALEYAKQNKTKFNKVAALAGGVSE- 167

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
            + YHHGE S A     +A  +  +NNI +L+ +G FG+R    + AA+ RY+F R   + 
Sbjct: 168  AGYHHGEGSAAGAGQLIANTW--NNNIPVLEGDGNFGSRLV--QQAAAPRYVFCR---VH 220

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            +  +    D  L   + D + + P +Y+P+IP VL NG +GI TG+++ I  ++   +V 
Sbjct: 221  QNFWDIYKDISLAPAHSDPEHMPPRFYLPVIPMVLANGVKGIATGYATTIFPHSYESLVK 280

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
                 + GE +      +  F G + +  SK    +  + G+ E V +T L I E+P+R 
Sbjct: 281  CTMAAVRGEEVPEPEVQFPCFKGIVRRINSK----SIEIEGLYELVGQTKLVITEVPVRY 336

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMM--------RTKQEGLL 993
               +Y   L+ + +Q    I G+++ + +    FEV L  +               E ++
Sbjct: 337  DRLEYVSILDKLEEQGK--IVGYKEQTSE-GFKFEVTLKRQDKFGELMEKNPEVAHEKII 393

Query: 994  KKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELL 1053
            K F L   +S  N+ + D  G + +YD    ++ +F  IR ++  +R + + +  E    
Sbjct: 394  KMFNLRQNLS-QNITVLDENGKLAEYDCAADLIRDFVEIRKKYTSQRVEFEKQKAEYARD 452

Query: 1054 KLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK 1087
                K  FI  V+  +IV+  + ++DL+ E++ K
Sbjct: 453  LAWAKFAFINEVIEEKIVIRGKSKSDLIAEVKSK 486


>gi|15643596|ref|NP_228642.1| DNA gyrase, subunit B [Thermotoga maritima MSB8]
 gi|418044997|ref|ZP_12683093.1| DNA gyrase, B subunit [Thermotoga maritima MSB8]
 gi|6831559|sp|P77993.2|GYRB_THEMA RecName: Full=DNA gyrase subunit B; AltName: Full=Topoisomerase II
           subunit B
 gi|4981365|gb|AAD35915.1|AE001750_9 DNA gyrase, subunit B [Thermotoga maritima MSB8]
 gi|351678079|gb|EHA61226.1| DNA gyrase, B subunit [Thermotoga maritima MSB8]
          Length = 636

 Score =  149 bits (376), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 169/634 (26%), Positives = 269/634 (42%), Gaps = 107/634 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE + +RP  YIGS  K                        GL+ +  E++ N+ D    
Sbjct: 15  LEPVRMRPGMYIGSTGKR-----------------------GLHHLVYEVVDNSVDEALA 51

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D ++V +  E   + V ++G G+PV+IH EEG    E++F  L     +  +  K 
Sbjct: 52  G-YCDWIRVTL-HEDGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKFSKDSYKI 109

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTK 215
           +GG +G G  + N  S    +    DG   K Y+Q +    GK   P     +   + T 
Sbjct: 110 SGGLHGVGVSVVNALSEWLEVRVHRDG---KIYRQRYER--GKPVTPVEVIGETDKHGTI 164

Query: 216 VSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK---SFAEYVD 272
           V FKPD   F+ T  + D++    + +  L   L    +  +NG +   K      EYV 
Sbjct: 165 VRFKPDPLIFSETEFDPDILEHRLREIAFLVPGLKIEFEDRINGEKKTFKFDGGIVEYVK 224

Query: 273 MYPKSVTRFHERVN-ERWEICVT-------LSEGQFQQ--------VSFVNGIATIKGGT 316
              +     H+ ++ +R E   T       + E  FQ         VSF N I T+ GGT
Sbjct: 225 YLNRGKKALHDVIHIKRTEKVKTKNGEDEVIVEIAFQYTDSYSEDIVSFANTIKTVDGGT 284

Query: 317 HVDYVANQVANHVMAVVNKKN---KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
           HV    + +   +     K N   K+ + +  +V+  L   ++  + NP F+ QTK  L 
Sbjct: 285 HVTAFKSTLTRLMNEYGKKHNFLKKDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLG 344

Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLS-WANFKQSKDLKKNDGTKTEDVRGISKL 432
             +        + EE  K   A   +V+T+LS   + KQ+++  K      E VR  + L
Sbjct: 345 NEEVKEAVTKAMREELKKIFDANPELVKTILSKIMSTKQAREAAKR---AREMVRRKNVL 401

Query: 433 EDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNV 484
           ++  L G        + E+  L + EGDSA      G +   RDR    V P+RGK+LNV
Sbjct: 402 QNTTLPGKLADCSSTHREKTELFIVEGDSA-----GGSAKQARDREFQAVLPIRGKILNV 456

Query: 485 REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            ++S +++L N +I +I   +G   G +++  K LRYG ++IMTD               
Sbjct: 457 EKSSLDRLLKNEQISDIIVAVGTGIGDDFDESK-LRYGRIIIMTD--------------- 500

Query: 545 IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV 604
                         D DG+HI+ LL+   + +   L++     +  + P+ +   K G+ 
Sbjct: 501 -------------ADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIA-LPPLYRI--KAGRE 544

Query: 605 LSFYSMPDYE--AWKESLGGNASSWSIKYYKGLG 636
             FY   D E   +KE L G      I+ YKGLG
Sbjct: 545 -EFYVYSDQELAEYKEKLQGK--RIEIQRYKGLG 575


>gi|148269239|ref|YP_001243699.1| DNA gyrase subunit B [Thermotoga petrophila RKU-1]
 gi|147734783|gb|ABQ46123.1| DNA gyrase subunit B [Thermotoga petrophila RKU-1]
          Length = 636

 Score =  148 bits (374), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 169/634 (26%), Positives = 269/634 (42%), Gaps = 107/634 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE + +RP  Y+GS  K                        GL+ +  E++ N+ D    
Sbjct: 15  LEPVRMRPGMYVGSTGKR-----------------------GLHHLVYEVVDNSVDEALA 51

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D ++V +  E   + V ++G G+PV+IH EEG    E++F  L     +  +  K 
Sbjct: 52  G-YCDWIRVTL-HEDGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKFSKDSYKI 109

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTK 215
           +GG +G G  + N  S    +    DG   K Y+Q +    GK   P     +   + T 
Sbjct: 110 SGGLHGVGVSVVNALSEWLEVRVHRDG---KIYRQRYER--GKPVTPVEVIGETDKHGTI 164

Query: 216 VSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK---SFAEYVD 272
           V FKPD   F+ T  + DV+    + +  L   L    +  +NG +   K      EYV 
Sbjct: 165 VRFKPDPLIFSETEFDPDVLEHRLREIAFLVPGLKIEFEDRINGEKKTFKFDGGIVEYVK 224

Query: 273 MYPKSVTRFHERVN-ERWEICVT-------LSEGQFQQ--------VSFVNGIATIKGGT 316
              +     H+ ++ +R E   T       + E  FQ         VSF N I T+ GGT
Sbjct: 225 YLNRGKKALHDVIHIKRTEKVKTKNGEDEVIVEIAFQYTDSYSEDIVSFANTIKTVDGGT 284

Query: 317 HVDYVANQVANHVMAVVNKKN---KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
           HV    + +   +     K N   K+ + +  +V+  L   ++  + NP F+ QTK  L 
Sbjct: 285 HVTAFKSTLTRLMNEYGKKHNFLKKDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLG 344

Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLS-WANFKQSKDLKKNDGTKTEDVRGISKL 432
             +        + EE  K   A S +V+ +LS   + KQ+++  K      E VR  + L
Sbjct: 345 NEEVKEAVTKAMREELKKIFDANSDLVKAILSKIMSTKQAREAAKR---AREMVRRKNVL 401

Query: 433 EDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNV 484
           ++  L G        + E+  L + EGDSA      G +   RDR    V P+RGK+LNV
Sbjct: 402 QNTALPGKLADCSSTHREKTELFIVEGDSA-----GGSAKQARDREFQAVLPIRGKILNV 456

Query: 485 REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            ++S +++L N +I +I   +G   G +++  K LRYG ++IMTD               
Sbjct: 457 EKSSLDRLLKNEQISDIIVAVGTGIGDDFDESK-LRYGRIIIMTD--------------- 500

Query: 545 IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV 604
                         D DG+HI+ LL+   + +   L++     +  + P+ +   K G+ 
Sbjct: 501 -------------ADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIA-LPPLYRI--KAGRE 544

Query: 605 LSFYSMPDYE--AWKESLGGNASSWSIKYYKGLG 636
             FY   D E   +KE L G      I+ YKGLG
Sbjct: 545 -EFYVYSDQELAEYKEKLQGK--RIEIQRYKGLG 575


>gi|166890|gb|AAA32877.1| topoisomerase II, partial [Arabidopsis thaliana]
          Length = 88

 Score =  148 bits (373), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 76/88 (86%), Positives = 82/88 (93%)

Query: 769 QSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKD 828
           QSLAS I+GMAQD+VGSNNINLL PNGQFGTR  GGKD+ASARYIFT+LSP+TR LFPKD
Sbjct: 1   QSLASAIIGMAQDYVGSNNINLLLPNGQFGTRTSGGKDSASARYIFTKLSPVTRILFPKD 60

Query: 829 DDKLLDYLNEDGQQIEPTWYMPIIPTVL 856
           DD LLDYLNEDGQ+IEPTWYMPIIPTVL
Sbjct: 61  DDLLLDYLNEDGQRIEPTWYMPIIPTVL 88


>gi|173000|gb|AAB59328.1| topoisomerase II, partial [Saccharomyces cerevisiae]
          Length = 166

 Score =  147 bits (372), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 73/168 (43%), Positives = 107/168 (63%), Gaps = 8/168 (4%)

Query: 843  IEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGF 902
            +EP WY+PI+P +LVNG+EGIGTG S+YIP +NP +I+ N+R L+N E +E MHPW+RG+
Sbjct: 2    VEPEWYLPILPMILVNGAEGIGTGRSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGW 61

Query: 903  GGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND---S 959
             GTIE+       + Y + G IE++ +  L I ELP R WT   +E+L   +  ND    
Sbjct: 62   TGTIEEIEP----LPYIIYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKP 117

Query: 960  FIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNM 1007
            +I+   +  DD  + F + LS E M +T++ G  ++FKL + IS  NM
Sbjct: 118  WIKDMEEQHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNM 164


>gi|291519486|emb|CBK74707.1| DNA topoisomerase IV subunit B [Butyrivibrio fibrisolvens 16/4]
          Length = 641

 Score =  147 bits (370), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 162/635 (25%), Positives = 279/635 (43%), Gaps = 106/635 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS  +                        GL  +  EI+ N+ D +  
Sbjct: 18  LEAVRKRPGMYIGSTSR-----------------------KGLNHLIYEIVDNSVD-EHL 53

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
             + D + V ++++    +V ++G G+PV +H + GV    L+F  L     +DD+V KT
Sbjct: 54  AGECDTIYVTLEKDGSC-TVEDNGRGIPVGMHAK-GVPAARLVFSTLHAGGKFDDSVYKT 111

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DG-KRLKKYKQ-VFTNNMGKKSEPNISKCKEGDNW 213
           +GG +G G+ + N  S   +++ + DG     +Y++ V T  +     P ISK  +  + 
Sbjct: 112 SGGLHGVGSSVVNALSEYMVVDISRDGFVHHDRYERGVPTEKLVDGLLPKISKTNK--HG 169

Query: 214 TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDM 273
           TK++F PD   F  T+ ++D V   K R+ + A  L   + +     R     +  Y + 
Sbjct: 170 TKINFLPDAEIFEKTYFKEDEV---KSRLHETA-YLNPGLTINYADLRGETPEYITYHE- 224

Query: 274 YPKSVTRFHERVNERWEI---CVTLS--------EGQFQQVS--------FVNGIATIKG 314
            P+ +  F + +N+  E     V  S        E  FQ  +        F N I   +G
Sbjct: 225 -PEGIKGFVKEINKTAETLHDVVYFSGKCDDVELEVAFQYCNEFKENILGFCNNIYNSEG 283

Query: 315 GTHVD----YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
           GTH+      +   + N+   +   K+K+AN    +V+N +   V+    +P F+ QTK 
Sbjct: 284 GTHITGFKTVLTTVINNYARELGILKDKDANFTGADVRNGITAIVSIKHPDPRFEGQTKT 343

Query: 371 TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV--RG 428
            L    +S  ++    +EF+         ++ ++S A  K +K  K  +  KT  +  + 
Sbjct: 344 KLDNPDASKATQKVCQDEFVLFFDRNLETLKAIISCAE-KSAKIRKSEEKAKTNLLTKQK 402

Query: 429 ISKLEDANLAG--GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF--GVFPLRGKLLNV 484
            S  ++  LA    R++E+C + + EGDSA      G +   R+R    + P+RGK+LNV
Sbjct: 403 FSFDQNGKLANCESRDAEKCEIFIVEGDSA-----GGSAKKARNRMYQAIMPIRGKILNV 457

Query: 485 REASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLW 541
            +AS ++VL N+EI  +    G      Y N   +  LRY  ++IM D            
Sbjct: 458 EKASMDKVLANAEIKTLINAFGCGFSEGYGNDFDITKLRYDKIVIMADA----------- 506

Query: 542 FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
                            D DG+HI  LL+ F + F P L++     +  + P+ KA    
Sbjct: 507 -----------------DVDGAHISTLLLTFFYRFMPELIREGHVYIA-MPPLYKAIPTK 548

Query: 602 GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
           G+    Y     E +++ + G   +++++ YKGLG
Sbjct: 549 GEEEYLYDDVALERYRKKMEGK--TFTLQRYKGLG 581


>gi|206895598|ref|YP_002246982.1| DNA gyrase B subunit [Coprothermobacter proteolyticus DSM 5265]
 gi|206738215|gb|ACI17293.1| DNA gyrase, B subunit [Coprothermobacter proteolyticus DSM 5265]
          Length = 637

 Score =  147 bits (370), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 172/647 (26%), Positives = 277/647 (42%), Gaps = 126/647 (19%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS +K+                       GL+ +  EI+ NA D    
Sbjct: 21  LEGVRKRPAMYIGSTDKN-----------------------GLHHLIWEIVDNAIDEAMA 57

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D +KVV+ ++  ++ V ++G G+PVEIH +EG    E++   L     +     K 
Sbjct: 58  GF-CDHIKVVLYKDGSVL-VEDNGRGIPVEIHPQEGRPTVEVVLTKLHAGGKFGGQAYKA 115

Query: 157 TGGRNGYGAKLTNIFS--TEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNW- 213
           +GG +G G  + N  S   E  ++       ++Y+       GK     +++ KE   + 
Sbjct: 116 SGGLHGVGLSVVNALSEWLEITVKRDGTVYWQRYE------FGKP----VTEVKEIGQYD 165

Query: 214 ------TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSF 267
                 T V FKPD + F  T  + +V+   ++R+ +LA  L   V +EL        S 
Sbjct: 166 DTESSATIVQFKPDKSIFADTRFDYEVI---RQRLRELA-FLNSEVTIELQRE----GSE 217

Query: 268 AEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQ------------------VSFVNGI 309
            E+            E  N   +I   L     QQ                  VSFVN +
Sbjct: 218 PEFFHFESGLAGLLEEVANSSEKIIDVLRFSGAQQDVQVEVAFTYVDDFDENIVSFVNSV 277

Query: 310 ATIKGGTHVDYVANQVANHVMAVVNKKN--KNANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
            T+ GGTHV  + + ++  +  V  +K   K+ NV + + +  L   V   +  P F+ Q
Sbjct: 278 RTVDGGTHVQGLRSAISKTLAEVGRRKGLLKDNNVSSDDFRQGLRAVVAVRVPEPEFEGQ 337

Query: 368 TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA--------NFKQSKDLKKND 419
           TK  L  +      +  +S+ F   +  ++ + +TL+  A         FK+++++ KN 
Sbjct: 338 TKGKLGSKYVRNIVEDVVSKAFESYLETQNDVTKTLIQRALASAEMRETFKRTREMMKNR 397

Query: 420 GTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF--GVFPL 477
             + E      KL D +    R+ E+  L++ EG+SA      G +  GRDR    V PL
Sbjct: 398 -LRVESTVLPGKLSDCS---SRDVEKRELLIVEGESA-----GGSAKQGRDRTIQAVLPL 448

Query: 478 RGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLS 537
           RGK+LNV +AS  +VL+N EI  +   +G   G E+ N   LRYG ++IMTD        
Sbjct: 449 RGKILNVEKASWKRVLDNEEIQALIAAIGTGVG-EHFNFAKLRYGKIIIMTD-------- 499

Query: 538 FLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA 597
                                D DG+HI+ LL+ F       L++     +    P+ K 
Sbjct: 500 --------------------ADVDGAHIRTLLLTFFFRMMRPLVEEGHIYIA-QPPLYKI 538

Query: 598 TNKNGK-VLSFYSMPDYEAW-KESLGGNASSWSIKYYKGLGTSTSKE 642
             K  K ++  YS  D +A+ +E  G N   + I+ YKGLG   +++
Sbjct: 539 ERKKSKDIIYLYSDEDLQAFLREHEGEN---FEIQRYKGLGEMNAEQ 582


>gi|389578559|ref|ZP_10168586.1| DNA gyrase, B subunit [Desulfobacter postgatei 2ac9]
 gi|389400194|gb|EIM62416.1| DNA gyrase, B subunit [Desulfobacter postgatei 2ac9]
          Length = 804

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 151/581 (25%), Positives = 249/581 (42%), Gaps = 111/581 (19%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIG+++                       + GL+ +  E++ N  D    
Sbjct: 21  LEAVRKRPSMYIGNVD-----------------------LEGLHHLVYEVVDNCIDEAMA 57

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D V V I ++   +SV ++G G+PVEIH+ E +   E++   L     +D    K 
Sbjct: 58  G-YCDTVLVTIHEDMS-VSVEDNGRGIPVEIHETEHIPACEVVMTKLHAGGKFDKGAYKV 115

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKV 216
           +GG +G G  + N  S   I+E    K  K Y Q ++    K++E  +    E    T++
Sbjct: 116 SGGLHGVGISVVNALSERLIMEVF--KNGKIYNQTYSKGH-KRTELEVIGDTE-KQGTRI 171

Query: 217 SFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK----------S 266
           +F PD    N      D ++   +R+ +LA  L K +K+ +   R   K          S
Sbjct: 172 TFSPDFTIMNQNEFSYDTLS---RRMRELA-FLNKGIKIVIEDERSAQKDEFYYEGGIVS 227

Query: 267 FAEYVDMYPKSVTRFHERV-------NERWEICVTLSEGQFQQV-SFVNGIATIKGGTHV 318
           F EY++   +S T  H+ +       + + E+ +  ++   +++ SF N I TI+GG HV
Sbjct: 228 FVEYLN---RSCTPLHDPIHIEGDKNDVQIEVAIQYNDTFKEKLYSFANNIRTIEGGAHV 284

Query: 319 DYVANQVANHVMAVVN------KKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETL 372
                 +   V A ++      K  ++  +   +++  L V ++  +  P F+ QTK  L
Sbjct: 285 SGFKGALTRTVNAYISGNATLPKNMQSIKISGDDMREGLAVIISVKLMEPQFEGQTKTKL 344

Query: 373 ----------TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTK 422
                     +L     G   E +    KK+ AK   V+   +    K++++L    GT 
Sbjct: 345 GNNEVKGIVESLLNEKLGQFLEENPNVAKKIIAKG--VDAARARDAAKRARELAHKKGTL 402

Query: 423 TEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF--GVFPLRGK 480
            +      KL +   A     E   L L EGDSA      G +  GRDR    + PL+GK
Sbjct: 403 LDSTLP-GKLAECQFADPAERE---LFLVEGDSA-----GGSAKQGRDRRFQAILPLKGK 453

Query: 481 LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLL 540
           +LNV +A  +++L + EI NI  +LG   G E  N++ +RY  ++IMTD           
Sbjct: 454 ILNVEKARFDKILRSDEIKNIITVLGTGAGREEYNIEKIRYHKVVIMTD----------- 502

Query: 541 WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLL 581
                             D DGSHI+ LL+ F +   P L+
Sbjct: 503 -----------------ADVDGSHIRTLLLTFFYRQMPDLI 526


>gi|32453488|ref|NP_861694.1| DNA topoisomerase II large subunit [Enterobacteria phage RB69]
 gi|32350307|gb|AAP75906.1| gp60plus39 large subunit topoisomerase II [Enterobacteria phage
           RB69]
          Length = 606

 Score =  145 bits (367), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 180/626 (28%), Positives = 271/626 (43%), Gaps = 87/626 (13%)

Query: 78  GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVE-IHQEEGVYVP 136
           GL K+ DEI+ N+ D   R     A K+ +  +++ +SV ++G G+P   +  + G  +P
Sbjct: 48  GLVKLIDEIIDNSVDEAIRTSFKFANKIDVQIKNNQVSVEDNGRGIPQGLVTDQTGEQIP 107

Query: 137 ELIFGHLL--TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTN 194
             +    +     N+ D+ ++ TGG NG G+ LTNIFST F   T+DG+      ++  N
Sbjct: 108 GPVAAWTIPKAGGNFGDDSERKTGGMNGVGSSLTNIFSTLFTGITSDGE-----NEITVN 162

Query: 195 NMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVK 254
                   + S  K     TKV F PD   F   +L    + +   R+  LA  +   +K
Sbjct: 163 CSNGMENKSWSSKKSKGKGTKVIFTPDFTSFEEHNLSQIYLDITLDRLQTLA-VVYPDIK 221

Query: 255 VELNGHRVP--VKSFAEYVDMYPKSVTRFHE----RVNERWEICVTLSEGQFQQVSFVNG 308
              NG +V    K FA+          +F E    + N++  I  T S   F+ +++VN 
Sbjct: 222 FTFNGKKVDGNFKRFAK----------QFGEDNIIQENDKVSIAFTTSPDGFRHLTYVNN 271

Query: 309 IATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHL--WVFVNALIDNPAFDS 366
           I T  GG HV+ V + +  H++  + KK K   V    VK  L   +F+  +  N  FDS
Sbjct: 272 IHTKNGGHHVECVMDDICEHLLPGIKKKYKGIEVTKARVKECLTMLMFIRDM-SNMRFDS 330

Query: 367 QTKETLTLRQSSFGSKCEL-----SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT 421
           QTKE LT       +  +L     ++  LK       IVE  L  A    ++   +    
Sbjct: 331 QTKERLTSTYGDIRNHIQLDAKKIAQALLKNEALIMPIVEAAL--ARKLAAEKAAETKAA 388

Query: 422 KTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKL 481
           K      + K   AN  G       TL LTEGDSA       + V  R+  G FPLRGK+
Sbjct: 389 KKATKAKVHKHIKANQCG--KDADTTLFLTEGDSAIGYL---IDVRDRELHGGFPLRGKV 443

Query: 482 LNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLW 541
           +N    S   ++ N E+ +I  I GL  G +  N     Y ++ IMTD            
Sbjct: 444 MNSWGMSYADMMKNKELFDICAITGLILGEKAENTN---YRNIAIMTD------------ 488

Query: 542 FILIFAWITTFCFMLAQDHDG-SHIKGLLINFIHSFWPSLLKIPSFLVEFI-TPIVKATN 599
                            DHDG   I   L+ F  S WP L +     + F+ TP++ A  
Sbjct: 489 ----------------ADHDGLGSIYPALLAFF-SNWPELFEQGR--IRFVKTPVIIA-- 527

Query: 600 KNGKVLS-FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFV 658
           + GK    FY++ +YE  K++L       SI+Y KGLG+    E ++  QN      D V
Sbjct: 528 QIGKTQKWFYTVAEYEEAKDTL----PKHSIRYIKGLGSLEKSEYRKMIQNPVY---DVV 580

Query: 659 WEDDQDGEAIELAFSKKKIEARKKWL 684
              +   E  E+       E RK+W+
Sbjct: 581 KLPENWKELFEMLMGDDS-ELRKEWM 605


>gi|299780361|gb|ADJ39723.1| DNA topoisomerase II large subunit [Enterobacteria phage T4T]
          Length = 516

 Score =  145 bits (366), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 227/486 (46%), Gaps = 35/486 (7%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S +EHI  R   YIGS    T   +++ +        ++ YVPGL K+ DEI+ N+ D  
Sbjct: 10  SDIEHIKKRSGMYIGSSANETHERFMFGK------WESVQYVPGLVKLIDEIIDNSVDEG 63

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  +++ ++V ++G G+P   +    G  +P  +    +     N+ D
Sbjct: 64  IRTKFKFANKINVTIKNNQVTVEDNGRGIPQAMVKTPTGEEIPGPVAAWTIPKAGGNFGD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
           + ++ TGG NG G+ LTNIFS  F+ ET DG+     +   +N M  KS  +I    +G 
Sbjct: 124 DKERVTGGMNGVGSSLTNIFSVMFVGETGDGQNNIVVR--CSNGMENKSWEDIPGKWKG- 180

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T+V+F PD   F    L    + +   R+  LA  +   ++   NG +V   +F +Y 
Sbjct: 181 --TRVTFIPDFMSFETNELSQVYLDITLDRLQTLA-VVYPDIQFTFNGKKVQ-GNFKKYA 236

Query: 272 DMYPKSVTRFHERVNER--WEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHV 329
             Y +     H  V E+    I V  S   F+Q+++VN I T  GG H+D   + +   +
Sbjct: 237 RQYDE-----HAIVQEQENCSIAVGRSPDGFRQLTYVNNIHTKNGGHHIDCAMDDICEDL 291

Query: 330 MAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCEL-S 386
           +  + +K K    KA  VK  L +  FV  +  N  FDSQTKE LT       S  +L +
Sbjct: 292 IPQIKRKFKIDVTKAR-VKECLTIVMFVRDM-KNMRFDSQTKERLTSPFGEIRSHIQLDA 349

Query: 387 EEFLKKVTAKSGIVETLLSWANFKQ--SKDLKKNDGTKTEDVRGISKLEDANLAGGRNSE 444
           ++  + +     I+  ++  A  ++  ++   +    K      + K   ANL G     
Sbjct: 350 KKISRAILNNEAILMPIIEAALARKLAAEKAAETKAAKKASKAKVHKHIKANLCG--KDA 407

Query: 445 QCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKI 504
             TL LTEGDSA       + V  ++  G +PLRGK+LN    S   +L N E+ +I  I
Sbjct: 408 DTTLFLTEGDSAIGYL---IDVRDKELHGGYPLRGKVLNSWGMSYADMLKNKELFDICAI 464

Query: 505 LGLKQG 510
            GL  G
Sbjct: 465 TGLVLG 470


>gi|397622491|gb|EJK66700.1| hypothetical protein THAOC_12353 [Thalassiosira oceanica]
          Length = 141

 Score =  145 bits (366), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 65/106 (61%), Positives = 82/106 (77%)

Query: 700 IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVS 759
           ++YS+  NKE+  +S  D+ RS+P + DGLK  QRK+LF  FK+    E KVAQ +GY+ 
Sbjct: 18  LQYSELFNKEIRAYSTYDVDRSLPHVFDGLKTSQRKVLFACFKKKLKNEIKVAQLAGYIG 77

Query: 760 EHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGK 805
           EHSAYHHGEQSL STI+GMAQ++VG+NNINLL P+GQFGTR  GGK
Sbjct: 78  EHSAYHHGEQSLHSTIIGMAQNYVGTNNINLLYPSGQFGTRRMGGK 123


>gi|392403099|ref|YP_006439711.1| DNA gyrase subunit B [Turneriella parva DSM 21527]
 gi|390611053|gb|AFM12205.1| DNA gyrase subunit B [Turneriella parva DSM 21527]
          Length = 668

 Score =  145 bits (366), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 168/647 (25%), Positives = 264/647 (40%), Gaps = 136/647 (21%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS +                       +PGL+ +  E++ N  D    
Sbjct: 50  LEAVRKRPGMYIGSTD-----------------------LPGLHHMVYEVVDNCIDEAMA 86

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D ++V I +  ++ISV ++G G+PV+IH + GV   E++   L     + D   K 
Sbjct: 87  G-HCDTIEVEISK-GNIISVSDNGRGIPVDIHPKVGVSTVEVVLTKLHAGGKFGDGAYKV 144

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTK 215
           +GG +G G  + N  S    ++   DGK     +     N GK   P  +K       T 
Sbjct: 145 SGGLHGVGVSVVNALSEWVEVDVHRDGK-----QHHIAFNRGKTRAPLKAKGPSKKRGTT 199

Query: 216 VSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP 275
           V+F  D   F+      D ++    R+ +LA  L K+VK+ +   R   K   E+V  Y 
Sbjct: 200 VTFLADSQIFDTLEYRYDTLS---SRLRELA-FLNKNVKITIRDTR--EKEVKEHVFQYK 253

Query: 276 KSVTRFHERVNER-----------------------WEICVTLSEGQFQQVSFVNGIATI 312
             +  F + + E+                        E C T SE   Q  +F N I T 
Sbjct: 254 GGIVEFVKMLTEKKNPLQKKPIYAIQQKDGIQVELAIEYCDTYSE---QIFTFANAIHTR 310

Query: 313 KGGTHVDYVANQVANHVMAVVNKKNKNANVK----AHNVKNHLWVFVNALIDNPAFDSQT 368
           +GGTH++     +   +     K   +  V+      +V+  L + ++ LI NP F+ QT
Sbjct: 311 EGGTHLEGFRTALTRALNEYKKKLGYDKKVEEPLTGDDVREGLVLVLSILIPNPQFEGQT 370

Query: 369 KETL-------TLRQSSFGSKCELSEEF---LKKVTAKSGIVETLLSWANFKQSKDLKKN 418
           K  L        +    +   CE  EE     K+V  K   ++  L+    +++K+L   
Sbjct: 371 KMKLGNGEVKGIVTSVVYEKLCEYFEENPQDAKRVIEKC--MQAALARIAARKAKEL--- 425

Query: 419 DGTKTEDVRGISKLEDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF 472
                  VR  S LE A L G       R  + C L + EGDSA      G +  GR+R 
Sbjct: 426 -------VRRKSALEGAGLPGKLADCSAREPKDCELFIVEGDSA-----GGSAKQGRNRH 473

Query: 473 --GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQ 530
              + PL+GK+ NV +   +++L + E+  +   +G   G E+ N+  LRY  ++IMTD 
Sbjct: 474 FQAILPLKGKITNVEKTKLDKILGDGEVAALISAIGCGIGAEF-NIDKLRYHKIVIMTD- 531

Query: 531 VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
                                       D DG+HI+ LL+ F     P L++     +  
Sbjct: 532 ---------------------------ADVDGAHIQTLLLTFFFRHMPLLIEKGGLYIAR 564

Query: 591 ITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASS-WSIKYYKGLG 636
             P+   ++   K   FY+  D E  K   G  A S + I+ YKGLG
Sbjct: 565 -PPLYLVSHGKEK---FYAYSDQEKDKIIKGFKAESKYVIQRYKGLG 607


>gi|294102629|ref|YP_003554487.1| DNA gyrase subunit B [Aminobacterium colombiense DSM 12261]
 gi|293617609|gb|ADE57763.1| DNA gyrase, B subunit [Aminobacterium colombiense DSM 12261]
          Length = 634

 Score =  144 bits (363), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 150/591 (25%), Positives = 260/591 (43%), Gaps = 86/591 (14%)

Query: 78  GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
           GL+ +  E++ N+ D        D + VVI  E + +SV ++G G+P E H   G    E
Sbjct: 37  GLHHLVYEVVDNSIDEAIAG-YCDKISVVI-YEDESVSVADNGRGIPTEPHPSSGRPASE 94

Query: 138 LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFS--TEFIIETADGKRLKKYKQVFTNN 195
           ++   L     +D+   K +GG +G G  + N  S   E  I+     R +++++     
Sbjct: 95  VVLTILHAGGKFDNQAYKVSGGLHGVGVSVVNALSEWLEITIQRNGLSRTQRFERGVPVT 154

Query: 196 MGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKV 255
              + EP+    K G   T V F PD   F       D+   +  R+ ++A  L   + +
Sbjct: 155 DLSEGEPS---TKTG---TYVRFHPDTTIFEEVRFSADI---LSGRLREMA-FLNPGLAI 204

Query: 256 ELNGHRV----------PVKSFAEYVD-----MYPKSVTRFHERVNERWEICVTLSEGQF 300
            L  HR            +K+F EY++     ++P+ +    E+     EI +  ++G  
Sbjct: 205 TLEDHRSGKCVEFHYEGGIKTFIEYLNKGKTPLFPEPIVIAGEKDGASVEIGIQYNDGYL 264

Query: 301 QQV-SFVNGIATIKGGTHVDYVANQVANHVMAVVNK----KNKNANVKAHNVKNHLWVFV 355
           +++ +F N I TI+GGTHV      +   V  V  +    + K+ N+   ++K  L   +
Sbjct: 265 ERIFAFANMIHTIEGGTHVAGFRTALTRAVNEVARRAKILREKDENLSGEDLKEGLTCVL 324

Query: 356 NALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA-NFKQSKD 414
           +  + NP F+ QTK  L   +    +   + E  L  +     +++ ++  A   +Q++D
Sbjct: 325 SIKLSNPQFEGQTKTKLGNSEIKGITDSVVYEGLLAYLDEHQEVLKPVVEKAIRARQARD 384

Query: 415 LKKNDGTKTEDVRGISKLEDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVG 468
             K    K  ++   + +   NL G       R+   C + + EGDSA      G +  G
Sbjct: 385 AAK----KARELVRKTAMTGMNLPGKLADCSSRDPHVCEVYIVEGDSA-----GGSAKQG 435

Query: 469 RDRF--GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMI 526
           RDR    + PLRGK+LNV +A  ++VL+N+EI  I + LG   G ++++ K LRY  ++I
Sbjct: 436 RDRGFQAILPLRGKILNVEKARFDKVLSNNEIRTIIQALGCGIGEDFDHSK-LRYNKIII 494

Query: 527 MTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLL-KIPS 585
           MTD                             D DG+HI  LL+ F + +   L+ K   
Sbjct: 495 MTD----------------------------ADVDGAHISTLLLTFFYRYMQDLIDKGHL 526

Query: 586 FLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
           +L +   P +    +   V   YS  +     +S   ++   S++ YKGLG
Sbjct: 527 YLAQ---PPLYRVQRGKNVTYCYSEKELRDIVDST-PDSRRASVQRYKGLG 573


>gi|452944779|ref|YP_007500944.1| DNA gyrase, B subunit [Hydrogenobaculum sp. HO]
 gi|452883197|gb|AGG15901.1| DNA gyrase, B subunit [Hydrogenobaculum sp. HO]
          Length = 786

 Score =  144 bits (362), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 165/595 (27%), Positives = 257/595 (43%), Gaps = 139/595 (23%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LEH+ LRP  YIG I +                        GL+ +  EI+ N+ D    
Sbjct: 15  LEHVRLRPSMYIGDISER-----------------------GLHHLIWEIVDNSVDEAMA 51

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
                 ++V I Q+ D ++V ++G G+PV IH++ G    E++   L     +D    + 
Sbjct: 52  GYATH-IRVHIHQD-DSVTVEDNGRGIPVYIHKDVGKPAVEVVLTVLGAGGKFDKKAYQY 109

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNI--SKCKEGDNW 213
           +GG +G GA + N  S   I+E   DG   K Y+Q +   +  K+E  I     K G   
Sbjct: 110 SGGLHGVGASVVNALSEWLIVEVYRDG---KIYRQEYERGV-PKTELQIMGDTTKRG--- 162

Query: 214 TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDM 273
           TK++FKPD   F  T ++ D+V   +KR+ +LA  L K+V  E+   R+        V  
Sbjct: 163 TKITFKPDAEIFETTKIKFDIV---EKRIRELA-YLNKNVTFEIIDDRLN----KHLVYK 214

Query: 274 YPKSVTRFHERVNERWEICV------------TLSEGQFQQV--------SFVNGIATIK 313
           + K +    E + E  E               TL E  F+          SFVN I TI+
Sbjct: 215 FEKGIIELVEYLAEGKEPLFDDVIYIESGKDGTLVEIAFKYTKDYKESLESFVNNIKTIE 274

Query: 314 GGTHVDYVANQVANHVMAVVNKKNKNANVK--------AHNVKNHLWVFVNALIDNPAFD 365
           GGTHV    + ++     VV+K ++N  +           +++  L   V+  +  P F+
Sbjct: 275 GGTHVTGFRSGLSK----VVSKLSQNIKISKELKEMFTGEDLREGLVAVVSCKVPEPQFE 330

Query: 366 SQTKETLTLRQSS----------FGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL 415
            QTK  L  +++                E  ++ LK +  K+  +E  L+    K++KDL
Sbjct: 331 GQTKTKLGNQETKNIVESITVEFLTDYFEKHQDILKLIVEKA--IEAALAREAAKKAKDL 388

Query: 416 KKNDGTKTEDVRGISKLEDANLAGG------RNSEQCTLILTEGDSAKALAMAGLSVVGR 469
                     VR  S LED +L G       ++  +C + + EG+SA      G +  GR
Sbjct: 389 ----------VRRKSFLEDTSLPGKLADCSEKDPSKCEIFIVEGESA-----GGSAKQGR 433

Query: 470 DRF--GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
           DR    + PL+GK+LNV +A  ++ L+N EI  I   LG   G E  ++ +LRY   +IM
Sbjct: 434 DRRFQAILPLKGKILNVEKARIDKALSNEEIRAIISALGCNIG-EDIDLSALRYHKTIIM 492

Query: 528 TDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK 582
           TD                             D DGSHI+ LL+ F + F   L++
Sbjct: 493 TD----------------------------ADVDGSHIRTLLLTFFYRFMTKLIE 519


>gi|66392041|ref|YP_238966.1| gp52 [Aeromonas phage 31]
 gi|62114878|gb|AAX63726.1| gp52 [Aeromonas phage 31]
          Length = 554

 Score =  144 bits (362), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 218/438 (49%), Gaps = 51/438 (11%)

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ-RSIPSMVDGLKPGQ 733
            ++I A K+ +L     NHL +          +N E + F+M  ++ R+IPS++DGLKP Q
Sbjct: 93   QEIPAWKRTIL----SNHLTELHNR-SLQSIINHEALEFAMYTVEERAIPSLIDGLKPVQ 147

Query: 734  RKILFCSF---KRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            R  ++ +    K+N  K  KVA  +G VSE + YHHGE S A     +A  +  +NNI +
Sbjct: 148  RFFMYRALEYAKQNRSKFNKVAALAGGVSE-AGYHHGEGSAAGAGQLIANTW--NNNIPI 204

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+ +G FG+R    + AA+ RY+F R   + +  +    D  L  ++ + + + P +Y+P
Sbjct: 205  LEGDGNFGSRMV--QQAAAPRYVFCR---VHQNFWDIYRDIELAPVHPEPEHLPPRYYLP 259

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTA 910
            +IP VL NG +GI TG+++ I  ++ + ++   +  + G+ +  +   +  F G I + +
Sbjct: 260  VIPMVLANGVKGIATGYATNIFPHSYKSLIKCTKAAIEGKPIPRLEVQFPEFSGVIRRVS 319

Query: 911  SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN------DSFIRGF 964
             K    T  V G+ E   +T L I ELP++     Y   L+ + DQ       +    GF
Sbjct: 320  DK----TIEVEGLYELSGQTKLTITELPVKFDRLSYVILLDKLKDQGKIVSYKEQHKNGF 375

Query: 965  RQYSDDTTVDFEVFLSE--ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTP 1022
            R    D T+  +    E  ++      E ++K F L   + T N+ + + +G + +Y+  
Sbjct: 376  RF---DVTLKRQDKFGEQLQNNPEATHEKIIKMFGLRQVL-TQNITVLNPEGKLAEYECA 431

Query: 1023 EQILEEFFHIRLEFYEKRKKVQLENLELELLKLEN-------KVRFILGVVNGEIVVNNR 1075
            E ++ +F        E R+K   E +E E  K E+       K +FI  V++ EI +  +
Sbjct: 432  EDVIRDFV-------EHRRKFTAERVEYERQKSEHARDLAWAKFKFINMVIDDEITIKGK 484

Query: 1076 KRTDLLLELRQ----KGF 1089
            ++ +L+ E+      KGF
Sbjct: 485  QKAELVQEIASNPDFKGF 502


>gi|281411537|ref|YP_003345616.1| DNA gyrase, B subunit [Thermotoga naphthophila RKU-10]
 gi|281372640|gb|ADA66202.1| DNA gyrase, B subunit [Thermotoga naphthophila RKU-10]
          Length = 636

 Score =  143 bits (361), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 169/637 (26%), Positives = 266/637 (41%), Gaps = 113/637 (17%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE + +RP  YIGS  K                        GL+ +  E++ N+ D    
Sbjct: 15  LEPVRMRPGMYIGSTGKR-----------------------GLHHLVYEVVDNSVDEALA 51

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D ++V +  E   + V ++G G+PV+IH EEG    E++F  L     +  +  K 
Sbjct: 52  G-YCDWIRVTL-HEDGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKFSKDSYKI 109

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTK 215
           +GG +G G  + N  S    +    DG   K Y+Q +    GK   P     +   + T 
Sbjct: 110 SGGLHGVGVSVVNALSEWLEVRVHRDG---KIYRQRYER--GKPVTPVEVIGETDKHGTI 164

Query: 216 VSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK---SFAEYVD 272
           V FKPD   F+ T  + DV+    + +  L   L    +  +NG +   K      EYV 
Sbjct: 165 VRFKPDPLIFSETEFDPDVLEHRLREIAFLVPGLKIEFEDRINGEKKTFKFDGGIVEYVK 224

Query: 273 MYPKSVTRFHERV-----------NERWEICVTLSEGQFQQ--------VSFVNGIATIK 313
              +    FH+ +           N   E+ V ++   FQ         VSF N I T+ 
Sbjct: 225 YLNRGKKVFHDVIYMKRTEKVQTKNGEDEVIVEIA---FQYTDSYSEDIVSFANTIKTVD 281

Query: 314 GGTHVDYVANQVANHVMAVVNKKN----KNANVKAHNVKNHLWVFVNALIDNPAFDSQTK 369
           GGTHV      +   +M    KK+     + + +  +V+  L   V+  + NP F+ QTK
Sbjct: 282 GGTHVTAFKTMLTR-LMNEYGKKHGFLKGDDSFQGEDVREGLTAVVSVYVKNPEFEGQTK 340

Query: 370 ETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGI 429
             L   +        + +E  K   A   +V+T+LS      +K  ++      E VR  
Sbjct: 341 SKLGNEEVKEAINRVMRDELKKIFDANPELVKTILS--KIMSTKQAREAARRAREMVRRK 398

Query: 430 SKLEDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKL 481
           + L++  L G        + E+  L + EGDSA      G +   RDR    V P+RGK+
Sbjct: 399 NVLQNTTLPGKLADCSSTDREKTELFIVEGDSA-----GGSAKQARDREFQAVLPIRGKI 453

Query: 482 LNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLW 541
           LNV ++S +++L N +I +I   +G   G +++  K LRYG ++IMTD            
Sbjct: 454 LNVEKSSLDKLLKNEQISDIIVAVGTGIGDDFDEGK-LRYGRIIIMTD------------ 500

Query: 542 FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
                            D DG+HI+ LL+   + +   L++     +  + P+ +   K 
Sbjct: 501 ----------------ADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIA-LPPLYRI--KA 541

Query: 602 GKVLSFYSMPDYEA--WKESLGGNASSWSIKYYKGLG 636
           GK   FY   D E   +KE L G      I+ YKGLG
Sbjct: 542 GKE-EFYVYSDLELMEYKEKLQGK--RIEIQRYKGLG 575


>gi|414087238|ref|YP_006987425.1| DNA topoisomerase II [Cronobacter phage vB_CsaM_GAP32]
 gi|378566072|gb|AFC21770.1| DNA topoisomerase II [Cronobacter phage vB_CsaM_GAP32]
          Length = 468

 Score =  143 bits (361), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 221/460 (48%), Gaps = 44/460 (9%)

Query: 703  SDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHS 762
            SD++N+  + ++++   RS+P  +DG K  QRK +F   K +   E K    +G +    
Sbjct: 23   SDYINQSSLEYALSTFDRSLPG-IDGFKNSQRKAIFTLSKIS--GEIKTVSCAGRMISDG 79

Query: 763  AYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITR 822
             Y HG+ S + T+  +A   V  NN  L+   G FGT  Q     AS RY + + + IT 
Sbjct: 80   IYLHGDASASGTLQNLASPVV--NNYPLIGKRGGFGT--QVNPTPASPRYTYVKKTKITE 135

Query: 823  FLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVAN 882
             L  +D D +    N DG  +EP +++P+IP  L+ G +G  T + S+I  Y   DI+ N
Sbjct: 136  ALVLRDLDVVPMQENYDGTTMEPKFFLPLIPLALL-GVDGTATAYKSFIFPYRMNDIIDN 194

Query: 883  VRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRW 942
              R + G+ + PM P+Y  +G   +    +  G  YT  G  E ++ +T+RI  L  R  
Sbjct: 195  TIRAIEGKELLPMTPYYASYGAN-DYVEDRGEG-KYTFFGKAEVIDASTVRITGLAPRMK 252

Query: 943  TQDYREFLESIIDQNDSFIRGFRQYSDDTT--VDFEVFLSEESMMRTKQEGLLKKFKLTT 1000
             +   +F+E +I+  DS     R Y D+++  VD  + L        ++  +L+ F ++T
Sbjct: 253  LE---KFVEDLIEMEDS--GKIRSYEDNSSGKVDITIKLPRGLSGSWQEMDVLEYFSIST 307

Query: 1001 TISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVR 1060
             ++ + +++    G +K YD  + I+ +F   R ++Y KR +  L + + E       VR
Sbjct: 308  KLAHT-LNVLGENGKVKSYDDVQGIIRDFVQFRFKYYIKRYEKLLSDADAE-------VR 359

Query: 1061 FILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVV 1120
            +       +I+V      D++ ++  K F    KN   +   V    DE + S++N + +
Sbjct: 360  Y-------KILVKECFDNDMMAKI--KSF----KNRAEVVDFVTALNDEIQASDDNIQNI 406

Query: 1121 NGVQSI-----DYDYLLSMAIGTLT-LEKVQGLLADRDKL 1154
                S      +YD +L      L  +++   LLA+ DK+
Sbjct: 407  VNFPSYRWTQENYDKVLQDIEDALAKMDEYNDLLANHDKI 446


>gi|431809198|ref|YP_007236095.1| DNA topoisomerase, phage-associated [Yersinia phage phiR1-RT]
 gi|398313487|emb|CCI88836.1| DNA topoisomerase, phage-associated [Yersinia phage phiR1-RT]
          Length = 459

 Score =  143 bits (360), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 204/403 (50%), Gaps = 39/403 (9%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            ++ E + F+M  ++ R+IP+M+DG KP QR ++  +    + N  K  K+A  +G V++ 
Sbjct: 28   IDNEALAFAMYTIENRAIPNMIDGFKPVQRFVIARALELARGNKDKFHKLASIAGGVAD- 86

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
              +HHGE S       +A D+  +NN  LL   G FG+R    ++A ++RYIF R+    
Sbjct: 87   LGFHHGEGSAQDAGALIANDW--NNNYPLLDGQGNFGSRLV--QEAGASRYIFARVGD-N 141

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
             +   KD +    +  +D + I P +Y+PIIPTVL+NG  GI TG+++ I  ++   +  
Sbjct: 142  FYKMYKDTEYAPSH--KDKEHIPPAYYLPIIPTVLLNGVSGIATGYATNILPHSVESVKQ 199

Query: 882  NVRRLLNGEMMEP--MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPI 939
            +V   L GE +EP    P +R   GT+ KT          + GI +  + + + I E+P 
Sbjct: 200  SVLAALKGETLEPEIQFPMFR---GTVVKTEDNSC----ELHGIYKFTSRSVMYISEIPY 252

Query: 940  RRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVF---------LSEESMMRTKQE 990
             +W +D   ++  I++     + G+  Y DD + +   F         L E+S  R   E
Sbjct: 253  -KWDRD--SYITKILEPLK--VNGYINYDDDCSKEGFGFKIKILSAYTLPEDSEKR--HE 305

Query: 991  GLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLEL 1050
             ++K F L    S  N+ + + +G +K YD    ++++F  +R  F +KR  +++   E 
Sbjct: 306  KIMKDFGLIERRS-QNLTVINEQGKLKVYDKSSDLIKDFVEVRKMFVQKRIDLKICESEE 364

Query: 1051 ELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL-RQKGFTPF 1092
                   K +FI  V++G IV+  + R  L+ EL   + F P+
Sbjct: 365  AFNVALTKAKFIKQVIDGTIVIQGKTRKALIDELDSNEDFKPY 407


>gi|317471524|ref|ZP_07930875.1| DNA gyrase, subunit B [Anaerostipes sp. 3_2_56FAA]
 gi|316901019|gb|EFV22982.1| DNA gyrase, subunit B [Anaerostipes sp. 3_2_56FAA]
          Length = 637

 Score =  142 bits (359), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 162/639 (25%), Positives = 266/639 (41%), Gaps = 117/639 (18%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS+        IYE     ++  ++          DE L    D    
Sbjct: 17  LEAVRKRPGMYIGSVSTKGLNHLIYE-----IVDNSV----------DEFLAGHCDEITV 61

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
             K D   V+ D          +G G+PV I+++ G+   E++F  L     + D   K 
Sbjct: 62  TLKDDGTAVIED----------NGRGIPVGINEQTGLSAVEMVFTMLHAGGKFGDGGYKI 111

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP--NISKCKEGDNWT 214
           +GG +G GA + N  ST   +       +  Y++ F    GK +EP   I  C++ +  T
Sbjct: 112 SGGLHGVGASVVNALSTWLKVTVKQDGNI--YEECFER--GKVTEPLRVIGSCRKSETGT 167

Query: 215 KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY 274
           K+ F PD   F+ T+ +    A+++ R+ + A      +  EL  H +  +S  E   +Y
Sbjct: 168 KIRFLPDPEIFDKTYFK---AAMIRNRLHETA-----YLNPELKIHYINERSGEETEVLY 219

Query: 275 --PKSVTRF-----------HERVNERWEICVTLSEGQFQQ--------VSFVNGIATIK 313
             P+ +  +           H+ V  + EI    +E  FQ         + F N I T +
Sbjct: 220 HEPEGICAYVKKLNDGKHVLHDPVYYKREINGIEAEIAFQYTEDFGENILGFCNNIYTTE 279

Query: 314 GGTHV-------DYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDS 366
           GGTH+         V NQ A  +  +   K K+ N    +V+N +   ++     P F+ 
Sbjct: 280 GGTHITGFKSKFTAVMNQYARELGIL---KEKDTNFTGADVRNGMTAIISVKHPEPRFEG 336

Query: 367 QTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV 426
           QTK  L    ++        +E +         ++ +L+ A  K +K  K  +  KT  +
Sbjct: 337 QTKTKLDNPDANKVVGEITGDETVLFFDKNLDTLKKVLACAE-KSAKIRKAEEKAKTNLL 395

Query: 427 --RGISKLEDANLAG--GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF--GVFPLRGK 480
             + +S   +  L+    R  E+C + + EGDSA      G +   R+R    + P+RGK
Sbjct: 396 VRQKLSIDSNGKLSNCESRKPEECEIFIVEGDSA-----GGSAKTARNRRTQAILPIRGK 450

Query: 481 LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLS 537
           +LNV +A+ ++VL N+EI  +    G      Y N   ++ LRY  ++IMTD        
Sbjct: 451 ILNVEKATMDKVLANAEIKTMINTFGCGFSEGYGNDFDIEKLRYQKIVIMTD-------- 502

Query: 538 FLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA 597
                                D DG+HI  LL+ F + F P L+      +    P+ KA
Sbjct: 503 --------------------ADVDGAHIATLLLTFFYRFMPELITHGHVYLA-TPPLYKA 541

Query: 598 TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
             K GK    +     E +K +  G    ++++ YKGLG
Sbjct: 542 IPKKGKETYLFDDTALEKYKAAHKG---PFTLQRYKGLG 577


>gi|163783146|ref|ZP_02178140.1| gyrase B [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881480|gb|EDP74990.1| gyrase B [Hydrogenivirga sp. 128-5-R1-1]
          Length = 798

 Score =  142 bits (359), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 157/591 (26%), Positives = 253/591 (42%), Gaps = 131/591 (22%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LEH+ LRP  YIG + +                        GL+ +  EIL NA D    
Sbjct: 29  LEHVRLRPAMYIGDVGER-----------------------GLHHLIWEILDNAVDEAMA 65

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               + V V+I  +   I+V + G G+PV+IH E G    E++F  L     ++      
Sbjct: 66  GYAKN-VSVIIHDDGS-ITVEDDGRGIPVDIHPETGKPAVEMVFTMLGAGGKFEKKAYAY 123

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTK 215
           +GG +G GA + N  S   ++E   DGK    Y+Q +     ++ EP + + K   N TK
Sbjct: 124 SGGLHGVGASVVNALSEWLLVEVYRDGK---IYRQEY-----RRGEP-VYELKVVGNTTK 174

Query: 216 ----VSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP-------- 263
               V+FKPD   F  T ++ D+V   +KR+ +LA  L   V+  L   R          
Sbjct: 175 RGTRVTFKPDPDIFETTRIKFDIV---EKRLRELA-YLNPEVRFYLKDERSDKEIVYKFD 230

Query: 264 --VKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQV--------SFVNGIATIK 313
             ++   EY+    + +  F + V  + +    + +  F+ V        SFVN + T++
Sbjct: 231 RGIEELVEYLSQAKEPL--FKDIVRIQGDKDGVIVDIAFRYVRDYKELIDSFVNNVKTVE 288

Query: 314 GGTHVDYVANQVANHVMAVVNKKNKNANVK----AHNVKNHLWVFVNALIDNPAFDSQTK 369
           GGTHV    + +   V+ +      +  +K      +V+  L   ++  +  P F+ QTK
Sbjct: 289 GGTHVTGFRSGLTKAVVRLAEGLKLSKELKTMFSGEDVREGLVAVISCKVPEPQFEGQTK 348

Query: 370 ETL----------TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKND 419
             L          ++           +++ LK +  K+  +E  L+    K++K+L    
Sbjct: 349 TKLGNQNVKTIVDSIVYDYLTEYFNENKDVLKLIVEKA--IEAALAREAAKKAKEL---- 402

Query: 420 GTKTEDVRGISKLEDANLAGG------RNSEQCTLILTEGDSAKALAMAGLSVVGRDRF- 472
                 VR  S LED  L G       ++ E+C + + EGDSA      G +   RDR  
Sbjct: 403 ------VRRKSPLEDGILPGKLADCSEKDPEKCEIFIVEGDSA-----GGSAKQARDRRF 451

Query: 473 -GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQV 531
             + PLRGK++NV +A  ++VL N E+  I   LG   G E + +  LRY  +++MTD  
Sbjct: 452 QAILPLRGKIINVEKARIDKVLANEEVKAIVSALGCGIGEELD-LSKLRYHKIILMTDA- 509

Query: 532 LLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK 582
                                      D DGSHI+ LL+ F + F P L++
Sbjct: 510 ---------------------------DIDGSHIRTLLLTFFYRFMPQLIE 533


>gi|38640269|ref|NP_944225.1| gp52 topoisomerase II medium subunit [Aeromonas phage Aeh1]
 gi|33414954|gb|AAQ17997.1| gp52 topoisomerase II medium subunit [Aeromonas phage Aeh1]
          Length = 438

 Score =  142 bits (359), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 192/385 (49%), Gaps = 25/385 (6%)

Query: 703  SDFVNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSFK---RNFIKEAKVAQFSGYV 758
            S  VN E   F+M  ++ R++PSMVDGLKP QR ILF   K   R F K A VA   G +
Sbjct: 9    SSLVNNEAKEFAMYTIEERALPSMVDGLKPVQRYILFSVLKNAGREFKKNAAVA---GVI 65

Query: 759  SEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLS 818
            SE+  Y+HGE +       MA  +  +NN  ++Q  G FG R    ++ A+ARYIF   S
Sbjct: 66   SEY-GYNHGEMAAMDAACLMASTW--NNNFPVIQGRGNFGCR--AVQEGAAARYIFC--S 118

Query: 819  PITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRD 878
               RF     D +LL+    DG  I P +Y+PI+PTVL+NG  GI TG+++ I  ++ + 
Sbjct: 119  KHERFESMFKDMELLEESTADG-SILPRYYLPILPTVLLNGVSGIATGFATKIMPHSVQS 177

Query: 879  IVANVRRLL-NGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKEL 937
            +   V ++L +G+  EP   + + FG  +      +   ++ V G  E   +T L I EL
Sbjct: 178  VAKCVEQVLKSGKCDEPEIQFPKFFGKILSIEGETQ---SWKVEGDYELSGKTKLIINEL 234

Query: 938  PIRRWTQDYREFLESIIDQNDSFIRGFRQYS-DDTTVDFEVFLSEESMMRTKQEGLLKKF 996
            P +     Y   L  +++ +   I G+ +    D    F+V L  +       E ++K F
Sbjct: 235  PPKYDRLKYVTHLNKLVETDK--IVGYDESKMKDREFCFKVTLKRD--FDVSHENIIKVF 290

Query: 997  KLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLE 1056
            KL+  +S   + + D  G +K YD    ++ +F + R    +KR    +     +L   +
Sbjct: 291  KLSQNVS-QYIRVIDQNGNLKPYDNASDLIVDFVNFRFNVLQKRIDNAIIATREKLDFAQ 349

Query: 1057 NKVRFILGVVNGEIVVNNRKRTDLL 1081
             KV FI  V+  +IV N + R  ++
Sbjct: 350  AKVDFIKLVLADKIVFNRQTRKQVI 374


>gi|315122037|ref|YP_004062526.1| DNA gyrase subunit B [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495439|gb|ADR52038.1| DNA gyrase subunit B [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 802

 Score =  142 bits (359), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 152/570 (26%), Positives = 254/570 (44%), Gaps = 81/570 (14%)

Query: 78  GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
           GL+ +  E+L NA D +  +   D + V ++ +    +V ++G G+P +IH+EEG+   E
Sbjct: 40  GLHHMVYEVLDNAID-EALEGYADIINVTLNMDGSC-TVSDNGRGIPTDIHKEEGISATE 97

Query: 138 LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
           +I   L     +D N  K +GG +G G  + N  S+   +     +  K Y+  F N  G
Sbjct: 98  VIMTRLHAGGKFDQNSYKVSGGLHGVGVSVVNALSSWLKLRIK--REGKIYEMSFIN--G 153

Query: 198 KKSEPNISKCKEG-DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVE 256
               P +     G D  T+++F P+   F++   + DV   +K R+ +L+  L   V + 
Sbjct: 154 IVDSPLVVVGDAGKDTGTEITFLPNSDIFSIHDFDCDV---LKHRLRELS-FLNSGVHIS 209

Query: 257 LNGHRVP------------VKSFAEYVDMYPKSVTRFHERV-NERWEICVTLS----EGQ 299
           L   R              +++F  Y+D + K + +   R+   R EI V L+    +G 
Sbjct: 210 LVDKRCSDPREIKLFYEGGIEAFVCYLDRHKKPLIQNPIRIQGMRDEISVDLAMRWNDGY 269

Query: 300 FQQV-SFVNGIATIKGGTHV----DYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVF 354
            + V  F N I    GGTH+      +  Q+ ++V      K    +V   + +      
Sbjct: 270 HENVLCFTNNIPQKDGGTHLAGLRSALTRQITSYVEKSFGSKKDKRSVVGDDCREGFTSV 329

Query: 355 VNALIDNPAFDSQTKETLT---LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQ 411
           ++  I +P F SQTKE L    +R    G   +    +L++  +++ I+   +  A+  +
Sbjct: 330 LSIKISDPRFSSQTKEKLVSSEVRSVVEGLVTDGLSSWLEEHPSEAKIIVKKVLEASMVR 389

Query: 412 SKDLKKNDGTKTEDVRGIS----KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVV 467
               +  D T+ + V  I+    KL D +    R+ ++  L L EGDSA   A  G S  
Sbjct: 390 DAARRARDLTRRKGVLDIASLPGKLADCS---ERDPKKSELFLVEGDSAGGSAKQGRS-- 444

Query: 468 GRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIM 527
            R+   + PLRGK+LNV  A  +++L++ EIG +   LG   G +  ++K LRY  ++IM
Sbjct: 445 -RENQAILPLRGKILNVERARFDKMLSSQEIGTLITALGTGIGQDSFDIKKLRYHKIIIM 503

Query: 528 TDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFL 587
           TD                             D DG+HI+ LL+ F     PSL++   FL
Sbjct: 504 TDA----------------------------DVDGAHIRTLLLTFFFRQMPSLIQ-NGFL 534

Query: 588 VEFITPIVKATNKNGKVLSFY----SMPDY 613
                P+   T   GK L +     S+ DY
Sbjct: 535 YIIKPPLYGIT--RGKSLQYVKDEESLEDY 562


>gi|37651722|ref|NP_932596.1| gp52 [Aeromonas phage 44RR2.8t]
 gi|34733022|gb|AAQ81559.1| topoisomerase II medium subunit [Aeromonas phage 44RR2.8t]
          Length = 555

 Score =  142 bits (359), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 219/438 (50%), Gaps = 51/438 (11%)

Query: 675  KKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ-RSIPSMVDGLKPGQ 733
            ++I A K+ +L     NHL +          +N E + F+M  ++ R+IPS++DGLKP Q
Sbjct: 93   QEIPAWKRTIL----SNHLTELHNR-SLQSIINHEALEFAMYTVEERAIPSLIDGLKPVQ 147

Query: 734  RKILFCSF---KRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINL 790
            R  ++ +    K+N  K  KVA  +G VSE + YHHGE S A     +A  +  +NNI +
Sbjct: 148  RFFMYRALEYAKQNRSKFNKVAALAGGVSE-AGYHHGEGSAAGAGQLIANTW--NNNIPI 204

Query: 791  LQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMP 850
            L+ +G FG+R    + AA+ RY+F R   + +  +    D  L  ++ + + + P +Y+P
Sbjct: 205  LEGDGNFGSRMV--QQAAAPRYVFCR---VHQNFWDIYRDIELAPVHPEPEHLPPRYYLP 259

Query: 851  IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTA 910
            +IP VL NG +GI TG+++ I  ++ + ++   +  + G+ +  +   +  F G I + +
Sbjct: 260  VIPMVLANGVKGIATGYATNIFPHSYKSLIKCTKAAIEGKPIPRLEVQFPEFSGVIRRVS 319

Query: 911  SKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQN------DSFIRGF 964
            +K    T  V G+ E   +T L I ELP++     Y   L+ + DQ       +    GF
Sbjct: 320  AK----TIEVEGLYELSGQTKLTITELPVKFDRLSYVILLDKLKDQGKIVSYKEQHKNGF 375

Query: 965  RQYSDDTTVDFEVFLSE--ESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTP 1022
            R    D T+  +    E  ++      E ++K F L   + T N+ + + +G + +Y+  
Sbjct: 376  R---FDVTLKRQDKFGEQLQNNPEATHEKIIKMFGLRQVL-TQNITVLNPEGKLAEYECA 431

Query: 1023 EQILEEFFHIRLEFYEKRKKVQLENLELELLKLEN-------KVRFILGVVNGEIVVNNR 1075
            E ++ +F        E R+K   E +E E  K E+       K +FI  V++ +I +  +
Sbjct: 432  EDVIRDFV-------EHRRKFTAERVEYERQKSEHARDLAWAKFKFINMVIDDKITIKGK 484

Query: 1076 KRTDLLLELRQ----KGF 1089
            ++ +L+ E+      KGF
Sbjct: 485  QKAELVKEIASNPDFKGF 502


>gi|299143458|ref|ZP_07036538.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298517943|gb|EFI41682.1| DNA gyrase, B subunit [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 639

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 160/636 (25%), Positives = 264/636 (41%), Gaps = 103/636 (16%)

Query: 32  QKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAA 91
           Q  + LE +  RP  YIGS         +YE     ++  +I     L  I D ILV   
Sbjct: 15  QVLTGLEPVRKRPGMYIGSTGSKGLHHLVYE-----VVDNSID--EALAGICDHILVEI- 66

Query: 92  DNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDD 151
                             E + +SV ++G G+P EIH + G    E +   L     +++
Sbjct: 67  -----------------YEDNSVSVSDNGSGIPTEIHPQTGKSTVETVLTILHAGGKFNN 109

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
              K +GG +G G  + N  STE I+       +  Y+Q F+  + K     + K K+ +
Sbjct: 110 GAYKVSGGLHGVGVSVVNALSTELIVNVKRNGNI--YEQKFSRGIAKTQLIEVEKLKKEE 167

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV--------- 262
             TK+ F+PD   F+    E ++++   KR  ++A  L K +K++   HR+         
Sbjct: 168 TGTKIFFRPDPEIFDTVEFEFEILS---KRFREMA-FLNKGIKIQFIDHRIGKDETYHYE 223

Query: 263 -PVKSFAEYVD----MYPKSVTRFHE-RVNERWEICVTLSEGQFQQV-SFVNGIATIKGG 315
             +KSF EY++       K +    E R N   EI +  ++   + + +F N I T +GG
Sbjct: 224 GGIKSFVEYINRKKTAIHKEIIYIDEIRENTAVEIALQYTDSYTENILTFANNINTEEGG 283

Query: 316 THVDYVANQVANHVMAVVNKKN----KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
           +H+    + +   +     K N    K  N+   +V+  L   ++  + NP F+ QTK  
Sbjct: 284 SHLSGFRSALTRCINDYGRKYNIIKEKEENLSGEDVREGLTGVISVKLPNPQFEGQTKAK 343

Query: 372 LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA---NFKQSKDLKKNDGTKTEDVRG 428
           L   ++       +SE     +     + +T+L  +      +    K  D T+ +++  
Sbjct: 344 LGNSETRGIVDSSVSENLSSFLEENPKVAKTILEKSLSARRAREAARKARDLTRKKNI-- 401

Query: 429 ISKLEDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
              LE   L G        ++E   + L EGDSA   A      V +    + PLRGK++
Sbjct: 402 ---LESMTLPGKLADCQNSDNETTEIFLVEGDSAGGSAKDARDSVFQ---AILPLRGKIM 455

Query: 483 NVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
           NV +A  +++LN+ EI  +    G   G E+ ++ +LRY  ++IMTD             
Sbjct: 456 NVEKARLDKILNSDEIKAMITAFGTGIGSEF-SIDNLRYNKIIIMTD------------- 501

Query: 543 ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG 602
                           D DG+HI  LL+ F   +   L++     V    P +    K  
Sbjct: 502 ---------------ADVDGAHIMTLLLTFFFRYMRPLIEEGHVYVA--QPPLFGILKGT 544

Query: 603 KVLSFYSMPDYEAWKESLG--GNASSWSIKYYKGLG 636
           K L  Y   D E  + +L   G    + IK YKGLG
Sbjct: 545 KALR-YCYDDRE-LQRALNELGRDKKFDIKRYKGLG 578


>gi|282599156|ref|YP_003359073.1| gp52 topoisomerase II medium subunit [Deftia phage phiW-14]
 gi|257219226|gb|ACV50241.1| gp52 topoisomerase II medium subunit [Deftia phage phiW-14]
          Length = 449

 Score =  142 bits (358), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 184/371 (49%), Gaps = 16/371 (4%)

Query: 698  KYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKE-AKVAQFSG 756
            K I  S  +  +   ++  D QR+IP + DGLKP  RKI+  + +    KE  KVA    
Sbjct: 2    KEISISQHIQGDHKAYATYDNQRNIPHIADGLKPSLRKIIHTAIETMRGKEEVKVAALGS 61

Query: 757  YVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTR 816
              S+ + Y HGE S+   ++ + +++ G+NN+ LLQ  GQFGT      DA+  RYI   
Sbjct: 62   RASDLTEYGHGEDSIIDAVVTLGRNYRGTNNLPLLQKQGQFGT--MVDNDASEPRYIHVS 119

Query: 817  LSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNP 876
                    F ++D  +LD+   +G+ IEP +++P +P VL+N S G+G G+SS I   +P
Sbjct: 120  RHANLSHCFKEEDRAILDFQVSEGKTIEPVFFLPPLPLVLINASSGVGNGYSSKILPRSP 179

Query: 877  RDIVANVRRLLNGEMMEPMH--PWYRGFGGTIEKTASKEAGVTYTVTGIIE--EVNETTL 932
            + ++   + +LN   + P    P + GF G ++ T       +Y + G I+     +T  
Sbjct: 180  QALIEMSKAILNETPINPEWSLPHFPGFKGRVKATGP----CSYEIHGAIQLNPKAKTEF 235

Query: 933  RIKELPIRRWTQDYREFLE-SIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEG 991
             I +LP     Q Y +F E  ++   DS  +  + +  D+T        + +    +   
Sbjct: 236  TIIDLPPDSKYQ-YEQFKERELLPLLDS--KTIKNFESDSTEQAWSIKVQSTREFAQHPE 292

Query: 992  LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
            L+K+  +   + T N+ ++   G +K+Y T E +L ++   R  + EKR++ ++     E
Sbjct: 293  LVKRMGMILRV-TENLTVWTWDGQLKRYPTAEALLRDWLVGREYYMEKRRQSEIARSTKE 351

Query: 1052 LLKLENKVRFI 1062
            +  L  KV F+
Sbjct: 352  MNWLLVKVEFL 362


>gi|311992987|ref|YP_004009854.1| gp52 DNA topoisomerase II medium subunit [Acinetobacter phage Acj61]
 gi|295815276|gb|ADG36202.1| gp52 DNA topoisomerase II medium subunit [Acinetobacter phage Acj61]
          Length = 465

 Score =  142 bits (358), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 204/393 (51%), Gaps = 34/393 (8%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            +N E + +++  ++ R+IP+++DG KP QR +++ +    K N  K  K+A  +G V++ 
Sbjct: 32   INNEALAYAIYTVENRAIPNLMDGFKPVQRFMVYRALEMAKGNHQKFHKLASVAGGVAD- 90

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
            + YHHGE S       MA  +  +NN   L   G FG+R    ++AA++RYIF R+S   
Sbjct: 91   AGYHHGENSAQEAGALMANTW--NNNFPFLDGQGNFGSRLV--QEAAASRYIFCRISDNF 146

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            R +F    D  +   +ED + + P  Y+P+IPTVL+NG  GI TG+S+ I  ++   ++ 
Sbjct: 147  RKVFK---DIEIAPQHEDEEHLPPKHYLPVIPTVLLNGVRGIATGYSTSILPHSLESVIE 203

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
              R  L G++ +     +  F G I KT   E G  Y + G+ +  ++T + I E+P   
Sbjct: 204  CTRLALQGKLDKEPEVAFPQFNGNIVKT---EDG-KYELQGVYKFTSKTQMYISEIP--- 256

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSDDTT---VDFEV-------FLSEESMMRTKQEG 991
            ++ D  +++E ++D  +   +GF  Y DD +     F+V          +E +M    E 
Sbjct: 257  YSFDRAKYVEKVLDPLED--KGFITYDDDCSKHGFGFKVKFRKDYKLPEDEGLM---HEK 311

Query: 992  LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
            +++ FKLT  +    + + ++  +  K++    +++ F  +R ++ + R +  +   E +
Sbjct: 312  IMRDFKLTEKVPQYIVVIDENGKLNDKFENASDLIKYFVEVRKKYVKGRIEFMINKTERQ 371

Query: 1052 LLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
                  K  FI  V NGE V+  +K+++L  EL
Sbjct: 372  FKLAIAKAMFIKTVNNGETVIKGKKKSELKEEL 404


>gi|169823702|ref|YP_001691313.1| DNA gyrase B subunit [Finegoldia magna ATCC 29328]
 gi|167830507|dbj|BAG07423.1| DNA gyrase B subunit [Finegoldia magna ATCC 29328]
          Length = 638

 Score =  142 bits (357), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 168/632 (26%), Positives = 266/632 (42%), Gaps = 106/632 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE + +RP  YIGS ++                        GL+ +  E++ N+ D    
Sbjct: 18  LEPVRVRPGMYIGSTDE-----------------------KGLHHLVYEVVDNSIDEALA 54

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D +KV I +++ +I V + G G+PVE H + G    E +   L     + ++  + 
Sbjct: 55  GV-CDLIKVTIKKDNSII-VEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKFSNDAYQY 112

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEG--DNW 213
           +GG +G G    N  ST  I     DGK    Y+Q F      K+   ++  KE      
Sbjct: 113 SGGLHGVGVSCVNALSTYLIARVKRDGKM---YEQRFEKG---KTVTGLTVVKENVRGTG 166

Query: 214 TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR----------VP 263
           T + F PD   F   + + +V+A   KR  ++A  L K VK+E +  R            
Sbjct: 167 TTIEFMPDDTIFETLNFDKNVLA---KRFREMA-FLNKGVKIEFSDERDGYKELFHYEGG 222

Query: 264 VKSFAEYVDMYPKSVTR-----FHERVNERWEICVTLSEGQFQQ-VSFVNGIATIKGGTH 317
           +KSF EY++   K +         E+   + EI +  +E   +  VSF N I T+ GGTH
Sbjct: 223 IKSFVEYINKSKKPLDHEVMYIEGEKDTTKVEIAMQYTESYNETIVSFTNNIKTVDGGTH 282

Query: 318 VDYVANQVANHVMAVVNKKN----KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
           V    + +   +      KN    K+ N+   +V+  +   V+  ++NP F+ QTK  L 
Sbjct: 283 VVGFKSALTRALNDYARNKNILKEKDDNLSGDDVREGITAVVSVKLNNPQFEGQTKGKLG 342

Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLE 433
             ++       + E           IV T++  A    S+  +       + VR  S L+
Sbjct: 343 NSEARTVVDSVVYEHLSFYFEENPKIVRTIIQKA--LASQKARLAARRARDLVRKKSVLD 400

Query: 434 DANLAGGRNSEQCT------LILTEGDSAKALAMAGLSVVGRD-RF-GVFPLRGKLLNVR 485
           +  L G     Q +      + L EGDSA   A       GRD +F  + PLRGK+LNV 
Sbjct: 401 NTTLPGKLADCQSSDIEYNEIFLVEGDSAGGSAKG-----GRDNKFQAILPLRGKILNVE 455

Query: 486 EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
           +A   +VLN+ EI  +    G   G  + ++  LRYG ++IMTD                
Sbjct: 456 KAHLERVLNSEEIKAMITAFGTGIGKNF-DISKLRYGKIVIMTD---------------- 498

Query: 546 FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL 605
                        D DG+HI+ LL+ F++ F   L++     V    P +    K  KV+
Sbjct: 499 ------------ADVDGAHIRTLLLTFLYRFMKPLVEKGH--VYIAQPPLYGIIKGVKVM 544

Query: 606 SF-YSMPDYEAWKESLGGNASSWSIKYYKGLG 636
            + Y+  + E   E   G  S+  ++ YKGLG
Sbjct: 545 EYCYTEQELEEALEKY-GERSNIKVQRYKGLG 575


>gi|311993520|ref|YP_004010385.1| gp52 topoisomerase II medium subunit [Acinetobacter phage Acj9]
 gi|295917477|gb|ADG60148.1| gp52 topoisomerase II medium subunit [Acinetobacter phage Acj9]
          Length = 447

 Score =  142 bits (357), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 201/396 (50%), Gaps = 30/396 (7%)

Query: 703  SDFVNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYV 758
            +  +N E  +++M  ++ R+IP+++DGLKP QR +L+ +    K    K  K+A  +G V
Sbjct: 9    TQIINNEAKIYAMYTVENRAIPNLIDGLKPVQRFMLYRAIQLAKGKSDKFHKLASVAGGV 68

Query: 759  SEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLS 818
            ++ + YHHGE S       MA  +  +NN   L   G FG+R    + AA++RYIF R+S
Sbjct: 69   AD-AGYHHGENSAQEAGALMANTW--NNNFPFLDGQGNFGSRLV--QQAAASRYIFCRVS 123

Query: 819  PITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRD 878
                 ++ KD +   ++  ED + + P +Y+PIIPTVL+NG  GI TG+S+ I  ++   
Sbjct: 124  ENFNKVY-KDTEIAPEH--EDLEHLPPRFYLPIIPTVLLNGVRGIATGYSTSILPHDFES 180

Query: 879  IVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELP 938
            IV    + LNGE +      +  F G +  T   +    Y + G     ++T + I E+P
Sbjct: 181  IVRCTEQALNGETVSMPTVAFPQFRGEVYCTEPNK----YELHGTYNFTSKTQMYISEIP 236

Query: 939  IRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVD---FEVFLSEESMMRTK----QEG 991
               +  D  +++E ++D  +    G   Y DD + +   F++   ++  + T      E 
Sbjct: 237  ---YQFDRAKYVEKVLDPLED--AGLITYDDDCSKEGFGFKIKFRKDYKLPTDVTELDEK 291

Query: 992  LLKKFKLTTTISTSNMHLFDSKGVIK-KYDTPEQILEEFFHIRLEFYEKRKKVQLENLEL 1050
            + + FKL   +S  N+ + D  G +  +++   Q++E F  +RL F EKR    +E  + 
Sbjct: 292  IKRDFKLVERVS-QNIVVIDENGKLHDRFENSAQLVEHFVKVRLSFVEKRIGFMIEKSKH 350

Query: 1051 ELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
                   K  FI  V N +I V  +KR++L  EL Q
Sbjct: 351  AFELAYAKALFIREVTNEKIQVKGKKRSELKEELAQ 386


>gi|363898906|ref|ZP_09325424.1| DNA gyrase [Oribacterium sp. ACB1]
 gi|395207927|ref|ZP_10397303.1| DNA gyrase, B subunit [Oribacterium sp. ACB8]
 gi|361960036|gb|EHL13295.1| DNA gyrase [Oribacterium sp. ACB1]
 gi|394706341|gb|EJF13857.1| DNA gyrase, B subunit [Oribacterium sp. ACB8]
          Length = 652

 Score =  141 bits (356), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 160/638 (25%), Positives = 277/638 (43%), Gaps = 105/638 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS         +YE     ++  ++          DE L    DN   
Sbjct: 31  LEAVRKRPGMYIGSTSTRGLHHLVYE-----IVDNSV----------DEALAGFCDN--- 72

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
                 + V I +++  I+V + G G+PV++ ++ G    E++F  L     +  +  K 
Sbjct: 73  ------ITVTIHKDNS-ITVEDDGRGIPVDLQKKAGKSALEVVFTVLHAGGKFGGSGYKV 125

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTK 215
           +GG +G GA + N  ST   +    DGK    Y   F+     K    I  C E ++ TK
Sbjct: 126 SGGLHGVGASVVNALSTYLDVTVCKDGK---IYTMSFSKGKVTKEIECIGTCTEEEHGTK 182

Query: 216 VSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP------------ 263
           V F PD   F  +  + D    +K R+ + A  L K+++++L   R              
Sbjct: 183 VHFLPDAEIFEESIYDFDT---LKVRLRETA-FLTKNLRIKLVDEREEELREMTFHYEGG 238

Query: 264 VKSFAEYVD-----MYPKSVTRFHERVNERWEICVTLSEGQFQQV-SFVNGIATIKGGTH 317
           +K F  Y++     +YP  +    E+     E+ +  ++   + + +FVN I T +GGTH
Sbjct: 239 IKEFVTYLNKGKEALYPDVIYCEGEKEQILVEVAMQHNDSYTENIYTFVNNINTPEGGTH 298

Query: 318 VDYVANQVANHV--MAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
           +    N +       A  NK  K+   N+   +++  L   ++  I++P F+ QTK+ L 
Sbjct: 299 LTGFKNALTKTFNDYARQNKLLKDSEPNLSGEDIREGLTCIISVKIEDPQFEGQTKQKLG 358

Query: 374 LRQSSFGSKCELSEE---FLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGIS 430
             ++    +  +SE+   FL++  A + ++      A   ++   K  D T+ +     S
Sbjct: 359 TSEAQVAVQGIVSEQLTYFLEQNPAVARVMCEKSIMAQRARAAARKARDLTRRK-----S 413

Query: 431 KLEDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNV 484
            L+   L G       +++E+C + + EGDSA   A  G +    +   V PLRGK+LNV
Sbjct: 414 ALDGVGLPGKLADCSSKDAERCEIFIVEGDSALGPAKEGRN---PETQAVLPLRGKVLNV 470

Query: 485 REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
           ++A  +++  N EI  +    G     +++ +  LRY  ++IMTD               
Sbjct: 471 QKARLDRIYANEEIKGMITAFGTGINEDFD-LSKLRYHKIIIMTDA-------------- 515

Query: 545 IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV 604
                         D DG+HI  L++ FI++F P L+K     V    P +    KN K 
Sbjct: 516 --------------DVDGAHISTLMLTFIYNFMPDLIKEGH--VYLAQPPLFNITKNKKH 559

Query: 605 LSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKE 642
              YS  +Y+   + +G + +  S   +KGLG   ++E
Sbjct: 560 YYAYSDEEYQNILKEIGADGADVS--RFKGLGEMDTEE 595


>gi|303234457|ref|ZP_07321095.1| DNA gyrase, B subunit [Finegoldia magna BVS033A4]
 gi|302494412|gb|EFL54180.1| DNA gyrase, B subunit [Finegoldia magna BVS033A4]
          Length = 638

 Score =  141 bits (355), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 168/632 (26%), Positives = 265/632 (41%), Gaps = 106/632 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE + +RP  YIGS ++                        GL+ +  E++ N+ D    
Sbjct: 18  LEPVRVRPGMYIGSTDE-----------------------KGLHHLVYEVVDNSIDEALA 54

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D +KV I +++ +I V + G G+PVE H + G    E +   L     + ++  + 
Sbjct: 55  GV-CDLIKVTIKKDNSII-VEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKFSNDAYQY 112

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEG--DNW 213
           +GG +G G    N  ST  I     DGK    Y+Q F      K+   ++  KE      
Sbjct: 113 SGGLHGVGVSCVNALSTYLIARVKRDGKM---YEQRFEKG---KTVTGLTVVKENVRGTG 166

Query: 214 TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR----------VP 263
           T + F PD   F   + + +V+A   KR  ++A  L K VK+E    R            
Sbjct: 167 TTIEFMPDDTIFETLNFDRNVLA---KRFREMA-FLNKGVKIEFADERDGYKELFHYEGG 222

Query: 264 VKSFAEYVDMYPKSVTR-----FHERVNERWEICVTLSEGQFQQ-VSFVNGIATIKGGTH 317
           +KSF EY++   K +         E+   + EI +  +E   +  VSF N I T+ GGTH
Sbjct: 223 IKSFVEYINKSKKPLDHEVMYIEGEKDTTKVEIAMQYTESYNETIVSFTNNIKTVDGGTH 282

Query: 318 VDYVANQVANHVMAVVNKKN----KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
           V    + +   +      KN    K+ N+   +V+  +   V+  ++NP F+ QTK  L 
Sbjct: 283 VVGFKSALTRALNDYARNKNILKEKDDNLSGDDVREGITAVVSVKLNNPQFEGQTKGKLG 342

Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLE 433
             ++       + E           IV T++  A    S+  +       + VR  S L+
Sbjct: 343 NSEARTVVDSVVYEHLSFYFEENPKIVRTIIQKA--LASQKARLAARRARDLVRKKSVLD 400

Query: 434 DANLAGGRNSEQCT------LILTEGDSAKALAMAGLSVVGRD-RF-GVFPLRGKLLNVR 485
           +  L G     Q +      + L EGDSA   A       GRD +F  + PLRGK+LNV 
Sbjct: 401 NTTLPGKLADCQSSDIEYNEIFLVEGDSAGGSAKG-----GRDNKFQAILPLRGKILNVE 455

Query: 486 EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
           +A   +VLN+ EI  +    G   G  + ++  LRYG ++IMTD                
Sbjct: 456 KAHLERVLNSEEIKAMITAFGTGIGKNF-DISKLRYGKIVIMTD---------------- 498

Query: 546 FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL 605
                        D DG+HI+ LL+ F++ F   L++     V    P +    K  KV+
Sbjct: 499 ------------ADVDGAHIRTLLLTFLYRFMKPLVEKGH--VYIAQPPLYGIIKGVKVM 544

Query: 606 SF-YSMPDYEAWKESLGGNASSWSIKYYKGLG 636
            + Y+  + E   E   G  S+  ++ YKGLG
Sbjct: 545 EYCYTEQELEEALEKY-GERSNIKVQRYKGLG 575


>gi|350563800|ref|ZP_08932620.1| DNA gyrase, B subunit [Thioalkalimicrobium aerophilum AL3]
 gi|349778321|gb|EGZ32677.1| DNA gyrase, B subunit [Thioalkalimicrobium aerophilum AL3]
          Length = 811

 Score =  141 bits (355), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 235/536 (43%), Gaps = 79/536 (14%)

Query: 78  GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
           GL+ +  E++ NA D        D +KV I  +   +SV ++G G+PV+IHQEEGV   E
Sbjct: 41  GLHHMVFEVVDNAIDEALAG-HCDTIKVTIHTDGS-VSVSDNGRGIPVDIHQEEGVSAAE 98

Query: 138 LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
           +I   L     +DDN  K +GG +G G  + N  S E  +     +  K +KQ +  ++G
Sbjct: 99  VIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEELNLTIH--RHGKVWKQTY--HLG 154

Query: 198 KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL 257
               P  +        T++ FKP    F +T    D    + KR+ +L+  L   V +EL
Sbjct: 155 VPQAPLTAVADSDKTGTEIRFKPSTEIFTITEFNFD---YLLKRLRELS-FLNSGVYIEL 210

Query: 258 NGHRVPVKSFAEY-------VDMY-----PKSVTRFHERV---NERWEICVTLSEGQFQQ 302
              R   K   +Y       VD       P +   FH      +   E+ +  S+   + 
Sbjct: 211 IDKRDDRKQVFQYEGGILAFVDFINHNKAPINAKAFHFTTLKDDITVEVAMQWSDAYQES 270

Query: 303 V-SFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN----ANVKAHNVKNHLWVFVNA 357
           +  F N I    GGTH+      +   + + + K+  N     N+   + +  L   ++ 
Sbjct: 271 IFCFTNNIPQRDGGTHLSGFRAALTRTLNSYIEKEGLNKKFKINISGDDAREGLAAVISV 330

Query: 358 LIDNPAFDSQTKETLTLRQSSFGSKCELSE---EFL-------KKVTAKSGIVETLLSWA 407
            + +P F SQTK+ L   +     +  ++E   E+L       K V AK  IV+   +  
Sbjct: 331 KVPDPKFSSQTKDKLVSSEVKSAVETAMNEKLAEYLLENPNEAKAVFAK--IVDAARARE 388

Query: 408 NFKQSKDLKKNDGTKTEDVRGI-SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSV 466
             ++++++ +  G    D+ G+  KL D        SE   L L EGDSA   A  G   
Sbjct: 389 AARKAREMTRRKGAL--DIAGLPGKLADCQEKDPALSE---LYLVEGDSAGGSAKQGRD- 442

Query: 467 VGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMI 526
             R R  + PL+GK+LNV  A  +++++++E+G +   LG   G +  N++ LRY  ++I
Sbjct: 443 --RRRQAILPLKGKILNVERARFDKMISSAEVGTLITALGCGIGPDEYNLEKLRYHRIII 500

Query: 527 MTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK 582
           MTD                             D DGSHI+ LL+ F +   P L++
Sbjct: 501 MTD----------------------------ADVDGSHIRTLLLTFFYRQLPDLIE 528


>gi|417925090|ref|ZP_12568517.1| DNA gyrase, B subunit [Finegoldia magna SY403409CC001050417]
 gi|341592387|gb|EGS35273.1| DNA gyrase, B subunit [Finegoldia magna SY403409CC001050417]
          Length = 638

 Score =  140 bits (354), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 168/632 (26%), Positives = 265/632 (41%), Gaps = 106/632 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE + +RP  YIGS ++                        GL+ +  E++ N+ D    
Sbjct: 18  LEPVRVRPGMYIGSTDE-----------------------KGLHHLVYEVVDNSIDEALA 54

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D +KV I +++ +I V + G G+PVE H + G    E +   L     + ++  + 
Sbjct: 55  GV-CDLIKVTIKKDNSII-VEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKFSNDAYQY 112

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEG--DNW 213
           +GG +G G    N  ST  I     DGK    Y+Q F      K+   ++  KE      
Sbjct: 113 SGGLHGVGVSCVNALSTYLIARVKRDGKM---YEQRFEKG---KTVTGLTVVKENVRGTG 166

Query: 214 TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR----------VP 263
           T + F PD   F   + + +V+A   KR  ++A  L K VK+E    R            
Sbjct: 167 TTIEFLPDDTIFETLNFDRNVLA---KRFREMA-FLNKGVKIEFADERDGYKELFHYEGG 222

Query: 264 VKSFAEYVDMYPKSVTR-----FHERVNERWEICVTLSEGQFQQ-VSFVNGIATIKGGTH 317
           +KSF EY++   K +         E+   + EI +  +E   +  VSF N I T+ GGTH
Sbjct: 223 IKSFVEYINKSKKPLDHEVMYIEGEKDTTKVEIAMQYTESYNETIVSFTNNIKTVDGGTH 282

Query: 318 VDYVANQVANHVMAVVNKKN----KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
           V    + +   +      KN    K+ N+   +V+  +   V+  ++NP F+ QTK  L 
Sbjct: 283 VVGFKSALTRALNDYARNKNILKEKDDNLSGDDVREGITAVVSVKLNNPQFEGQTKGKLG 342

Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLE 433
             ++       + E           IV T++  A    S+  +       + VR  S L+
Sbjct: 343 NSEARTVVDSVVYEHLSFYFEENPKIVRTIIQKA--LASQKARLAARRARDLVRKKSVLD 400

Query: 434 DANLAGGRNSEQCT------LILTEGDSAKALAMAGLSVVGRD-RF-GVFPLRGKLLNVR 485
           +  L G     Q +      + L EGDSA   A       GRD +F  + PLRGK+LNV 
Sbjct: 401 NTTLPGKLADCQSSDIEYNEIFLVEGDSAGGSAKG-----GRDNKFQAILPLRGKILNVE 455

Query: 486 EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
           +A   +VLN+ EI  +    G   G  + ++  LRYG ++IMTD                
Sbjct: 456 KAHLERVLNSEEIKAMITAFGTGIGKNF-DISKLRYGKIVIMTD---------------- 498

Query: 546 FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL 605
                        D DG+HI+ LL+ F++ F   L++     V    P +    K  KV+
Sbjct: 499 ------------ADVDGAHIRTLLLTFLYRFMKPLVEKGH--VYIAQPPLYGIIKGVKVM 544

Query: 606 SF-YSMPDYEAWKESLGGNASSWSIKYYKGLG 636
            + Y+  + E   E   G  S+  ++ YKGLG
Sbjct: 545 EYCYTEQELEEALEKY-GERSNIKVQRYKGLG 575


>gi|312262749|gb|ADQ53044.1| gp52 topoisomerase II medium subunit [Aeromonas phage PX29]
          Length = 438

 Score =  140 bits (354), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 193/388 (49%), Gaps = 31/388 (7%)

Query: 703  SDFVNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSFK---RNFIKEAKVAQFSGYV 758
            S  V+ E   F+M  ++ R++PS+VDGLKP QR IL+   K   R F K A +A   G +
Sbjct: 9    SSMVDVEAREFAMYTIEERALPSVVDGLKPAQRYILYSVLKNAGREFKKNAAIA---GVI 65

Query: 759  SEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLS 818
            SE+  Y+HGE +       MA  +  +NN  ++Q  G FG+R    ++ A+ARYIF    
Sbjct: 66   SEY-GYNHGETAAMDAACLMASTW--NNNFPVIQGRGNFGSR--AVQEGAAARYIFCTKH 120

Query: 819  PITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRD 878
                 +F KD D L + L  DG  I P +Y+PI+PTVL+NG  GI TG+S+ I  +N + 
Sbjct: 121  SNFDSMF-KDMDLLEESL-ADGS-ILPRYYLPILPTVLLNGVSGIATGFSTKILPHNVQS 177

Query: 879  IVANVRRLL-NGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKEL 937
            +   V ++L  G+  EP   + + FG  I      +   ++T+ G  E   +T L I EL
Sbjct: 178  VAKCVEQVLKTGKCDEPELQFPKFFGKIIPIEGKSQ---SWTLEGEYELSGKTKLTITEL 234

Query: 938  PIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFK 997
            P +     Y   L  ++D  D  +       D     F++ L  E       E ++K FK
Sbjct: 235  PPKYDRVKYVTLLNKLVDA-DKIVSYDESKFDGREFCFKITLKRE--FDATHENIMKTFK 291

Query: 998  LTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLEL----ELL 1053
            L+  IS   + + D  G +K Y+    ++ +F + R    +KR    ++N +L    +L 
Sbjct: 292  LSQAIS-QYIRVIDPNGELKAYEKASDLIVDFVNFRFGVLQKR----IDNAKLVANEKLG 346

Query: 1054 KLENKVRFILGVVNGEIVVNNRKRTDLL 1081
                KV FI  V++ +I+  N  R  ++
Sbjct: 347  FARAKVTFIKHVLDQDIIFTNNTRKQVV 374


>gi|456351348|ref|YP_007501300.1| DNA topisomerase II medium subunit [Salmonella phage S16]
 gi|347466392|gb|AEO97178.1| DNA topisomerase II medium subunit [Salmonella phage S16]
 gi|408386934|gb|AFU63943.1| DNA topoisomerase [Salmonella phage STML-198]
          Length = 445

 Score =  140 bits (354), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 232/480 (48%), Gaps = 63/480 (13%)

Query: 708  KELILFSMADLQRSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEHSAY 764
            KE  ++++ +  R+IP+M+DG KP QR ++  +    K N  K  K+A  +G V++   Y
Sbjct: 17   KEFAIYTVEN--RAIPNMIDGFKPVQRFVIRRALDLSKGNKEKFHKLASVAGGVAD-LGY 73

Query: 765  HHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFL 824
            HHGE S       MA  +  +NN  LL   G FG+R    + AA++RYIF R+S   R +
Sbjct: 74   HHGEGSAQDAGALMANTW--NNNFPLLDGQGNFGSRLV--QKAAASRYIFCRISDNFRKV 129

Query: 825  FPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVR 884
            +    D  +   ++D +   P +Y+P+IPTVL+NG  GI TG+++ I  ++ + +V   +
Sbjct: 130  YK---DLEIAPKHKDEEHTPPAFYLPVIPTVLLNGVRGIATGYATNILPHSFKSVVECTK 186

Query: 885  RLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQ 944
              L G++ +     +  F G I    + + GV   + G+ +  + T + I E+P   +  
Sbjct: 187  LALQGKLDKEPEVEFPKFNGKI--VPTDDGGV--ELHGVYKFTSATQMYISEIP---YKF 239

Query: 945  DYREFLESIIDQNDSFIRGFRQYSDDTT---VDFEVFLSEESMMRT----KQEGLLKKFK 997
            D   ++E ++D  +   +GF  Y+DD +     F+V   ++  +      + + +++ FK
Sbjct: 240  DRDTYIEKVLDPLED--KGFITYTDDCSKSGFGFKVKFKKDYGLPADEDKRHDAVMRDFK 297

Query: 998  LTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLEN 1057
            L   +S   + + ++  +  K+    ++++ F  +R  F EKR + + E++  +L     
Sbjct: 298  LIEKLSQFIVVIDENGKLNDKFQKASELIKHFVEVRKTFVEKRIEFKREDVLSQLNLAVA 357

Query: 1058 KVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENP 1117
            K +FI  V++GEIV+  + R  L+ EL                              E  
Sbjct: 358  KAQFIKQVISGEIVIQGKTRKQLVTEL------------------------------EKT 387

Query: 1118 EVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
            E+         D L+ M I  +T ++ + L+    +L +E    +  TPE  ++KDL+ L
Sbjct: 388  ELFKA----HIDKLVGMNIYHITSDEAKKLVEAAKELKKEYQYWKDTTPEVEFMKDLEEL 443


>gi|297588052|ref|ZP_06946696.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Finegoldia magna
           ATCC 53516]
 gi|297574741|gb|EFH93461.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Finegoldia magna
           ATCC 53516]
          Length = 638

 Score =  140 bits (354), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 166/630 (26%), Positives = 262/630 (41%), Gaps = 102/630 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE + +RP  YIGS ++                        GL+ +  E++ N+ D    
Sbjct: 18  LEPVRVRPGMYIGSTDE-----------------------KGLHHLVYEVVDNSIDEALA 54

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D +KV I +++ +I V + G G+PVE H + G    E +   L     + ++  + 
Sbjct: 55  GV-CDLIKVTIKKDNSVI-VEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKFSNDAYQY 112

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKK-SEPNISKCKEGDNWT 214
           +GG +G G    N  ST  I     DGK    Y+Q F    GK  +E  + K       T
Sbjct: 113 SGGLHGVGVSCVNALSTYLIARVKRDGKM---YEQRFEK--GKTVTELTVIKENVRGTGT 167

Query: 215 KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV----------PV 264
            + F PD   F   + + +V+A   KR  ++A  L K VK+E    R            +
Sbjct: 168 TIEFMPDNTIFETLNFDKNVLA---KRFREMA-FLNKGVKIEFADEREGYKELFHYEGGI 223

Query: 265 KSFAEYVDMYPKSVTR-----FHERVNERWEICVTLSEGQFQQ-VSFVNGIATIKGGTHV 318
           KSF EY++   K +         E+   + EI +  +E   +  VSF N I T+ GGTHV
Sbjct: 224 KSFVEYINKSKKPLDHEVMYIEGEKDTTKVEIAMQYTESYNETIVSFTNNIKTVDGGTHV 283

Query: 319 DYVANQVANHVMAVVNKKN----KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
               + +   +      KN    K+ N+   +V+  +   V+  ++NP F+ QTK  L  
Sbjct: 284 VGFKSALTRALNDYARNKNILKEKDDNLSGDDVREGITAVVSVKLNNPQFEGQTKGKLGN 343

Query: 375 RQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLED 434
            ++       + E           IV+T++  A    S+  +       + VR  S L++
Sbjct: 344 SEARTVVDSVVYEHLSFYFEENPKIVKTIIQKA--LASQKARLAARRARDLVRKKSVLDN 401

Query: 435 ANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRD-RF-GVFPLRGKLLNVRE 486
             L G        + E   + L EGDSA   A       GRD +F  + PLRGK+LNV +
Sbjct: 402 TTLPGKLADCQSSDIEHNEIFLVEGDSAGGSAKG-----GRDNKFQAILPLRGKILNVEK 456

Query: 487 ASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIF 546
           A   +VLN++EI  +    G   G  + ++  LRYG ++IMTD                 
Sbjct: 457 AHLERVLNSNEIKAMITAFGTGIGKNF-DISKLRYGKIVIMTD----------------- 498

Query: 547 AWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLS 606
                       D DG+HI+ LL+ F++ F   L++     V    P +    K  KV+ 
Sbjct: 499 -----------ADVDGAHIRTLLLTFLYRFMKPLVEKGH--VYIAQPPLYGIIKGVKVME 545

Query: 607 FYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
           +              G  S+  ++ YKGLG
Sbjct: 546 YCYTEKELEEALEKYGERSNIKVQRYKGLG 575


>gi|317498962|ref|ZP_07957245.1| hypothetical protein HMPREF0996_02229 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316893795|gb|EFV15994.1| hypothetical protein HMPREF0996_02229 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 637

 Score =  140 bits (354), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 160/635 (25%), Positives = 256/635 (40%), Gaps = 109/635 (17%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS+        IYE     ++  ++          DE L    D    
Sbjct: 17  LEAVRKRPGMYIGSVSTKGLNHLIYE-----IVDNSV----------DEFLAGYCDEITV 61

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D    + D          +G G+PV I++  G    E++F  L     + D   K 
Sbjct: 62  SLNKDGTATITD----------NGRGIPVGINERTGKTAVEMVFTMLHAGGKFGDGGYKI 111

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP--NISKCKEGDNWT 214
           +GG +G GA + N  ST   +    G ++  Y+Q +    GK   P   I  C++ D  T
Sbjct: 112 SGGLHGVGASVVNALSTWLTVTVKQGGKV--YQQRYER--GKIITPLEVIGTCRKSDTGT 167

Query: 215 KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKV----ELNGHRVPV-----K 265
            V F PD   F+ T+ +    A+++ R+ + A  L   + +    E  G    V     +
Sbjct: 168 NVQFLPDPEIFDKTYFK---AAMVRNRLHETA-YLNPKLTIHYVNEREGEETTVDYHEPE 223

Query: 266 SFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQ--------VSFVNGIATIKGGTH 317
               YV    +     HE V  +  I    +E  FQ         + F N I TI+GGTH
Sbjct: 224 GICAYVKKLNEGKQMLHEPVYFKRMIDGIEAEVAFQYTEDFGENILGFCNNIYTIEGGTH 283

Query: 318 VD-------YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
           +         + NQ A  +  +   K K++N    +V+N +   V+     P F+ QTK 
Sbjct: 284 ITGFKTKFTTIMNQYAREIGVL---KEKDSNFTGTDVRNGMTAIVSVKHPEPRFEGQTKT 340

Query: 371 TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV--RG 428
            L    ++        EE +         ++ +L+ A  K +K  K  +  KT  +  + 
Sbjct: 341 KLDNPDAAKAVGEIAGEELVLYFDKNLDTLKKVLACAE-KSAKIRKAEEKAKTNMLVKQK 399

Query: 429 ISKLEDANLAG--GRNSEQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNV 484
           +S   +  LA    R ++ C + + EGDSA      G +   R+R    + P+RGK+LNV
Sbjct: 400 LSIDSNGKLANCESRKAQDCEIFIVEGDSA-----GGSAKTARNRKTQAILPIRGKILNV 454

Query: 485 REASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLW 541
            +A+ ++VL N+EI  +    G      Y N   +  LRY  ++IMTD            
Sbjct: 455 EKATMDKVLANAEIKTMINAFGCGFSEGYGNDFDISKLRYHKIIIMTDA----------- 503

Query: 542 FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
                            D DG+HI  LL+ F + F P L+      +    P+ KA  K 
Sbjct: 504 -----------------DVDGAHIATLLLTFFYRFMPELITHGHVFLA-TPPLYKAMPKK 545

Query: 602 GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
           G+    +       ++    GN   ++++ YKGLG
Sbjct: 546 GEETYLFDDAALTRYRAEHKGN---FTLQRYKGLG 577


>gi|86141195|ref|ZP_01059741.1| DNA gyrase subunit B [Leeuwenhoekiella blandensis MED217]
 gi|85831754|gb|EAQ50209.1| DNA gyrase subunit B [Leeuwenhoekiella blandensis MED217]
          Length = 646

 Score =  140 bits (353), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 165/646 (25%), Positives = 279/646 (43%), Gaps = 126/646 (19%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           +EH+ +RP  YIG +                        V GL+ +  E++ N+ D    
Sbjct: 21  MEHVRMRPSMYIGDVG-----------------------VRGLHHLVYEVVDNSIDEAMA 57

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D++KV+I+ E++ ISV ++G G+PV++H++EGV   E++   +     +D +  K 
Sbjct: 58  G-HCDSIKVIIN-ENNSISVKDNGRGIPVDLHKKEGVSALEVVMTKIGAGGKFDKDSYKV 115

Query: 157 TGGRNGYGAKLTNIFSTEFIIET-ADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTK 215
           +GG +G G    N  ST        DG   K ++Q +    GK   P        D  T 
Sbjct: 116 SGGLHGVGVSCVNALSTHLKATVYRDG---KIWEQEYEK--GKAMYPVKGIGDTDDRGTA 170

Query: 216 VSFKPDLAKF-NMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP----------- 263
           V+F PD + F   T    D +A    R+ +LA  L K +K+ L   R             
Sbjct: 171 VTFLPDPSIFQTTTEYNYDTLA---SRMRELA-YLNKGIKISLTDKRQKDEKGDFVSETF 226

Query: 264 -----VKSFAEYVD-----MYPKSVTRFHERVNERWEICVTLSEGQFQQV-SFVNGIATI 312
                +K F  ++D     +  + ++   E+ +   E+ +  ++   + + S+VN I T 
Sbjct: 227 HSEEGLKEFVRFLDGNRQPIIGEVISMEGEKNDIPVEVAMIYNDSYAENLHSYVNNINTH 286

Query: 313 KGGTHVDYVANQVANHVMAVVNKKNKNAN---------VKAHNVKNHLWVFVNALIDNPA 363
           +GGTH+      + + +     KK  +A+         +   + +  L   ++  +  P 
Sbjct: 287 EGGTHLAGFRRGLTSSL-----KKYADASGMLDKLKFEIAGDDFREGLTAIISVKVAEPQ 341

Query: 364 FDSQTKETLTLRQSSFG---SKCELSEEFLKKV--TAKSGIVETLLSWANFKQSKDLKKN 418
           F+ QTK  L  R+ +     +  E+ E +L++    AK+ + + +L+      +K  ++ 
Sbjct: 342 FEGQTKTKLGNREVTSAVSQAVSEMVEIYLEEHPDDAKTIVQKVILAAQARHAAKKAREM 401

Query: 419 DGTKT-EDVRGI-SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF--GV 474
              KT   + G+  KL D +     + E C + L EGDSA      G + +GRDR    +
Sbjct: 402 VQRKTVMSIGGLPGKLADCSET---DPEACEVFLVEGDSA-----GGTAKMGRDRNFQAI 453

Query: 475 FPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN----NVKSLRYGHLMIMTDQ 530
            PLRGK+LNV +A  ++V  N EI NI   LG+  G E +    N+  LRY  ++IM D 
Sbjct: 454 LPLRGKILNVEKAMQHKVFENEEIKNIFTALGVTIGTEEDSKALNLSKLRYKKIVIMCD- 512

Query: 531 VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
                                       D DGSHI  L++ F   +   L  +    V  
Sbjct: 513 ---------------------------ADVDGSHIATLILTFFFRYMREL--VEGGHVYI 543

Query: 591 ITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
            TP +    K  K+   +S  + + +   +GG   S S++ YKGLG
Sbjct: 544 ATPPLYLLKKGKKMRYAWSEKERDEYNAQMGG---SVSVQRYKGLG 586


>gi|321453499|gb|EFX64728.1| hypothetical protein DAPPUDRAFT_333905 [Daphnia pulex]
          Length = 193

 Score =  140 bits (353), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 106/192 (55%), Gaps = 10/192 (5%)

Query: 138 LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
           +IF  LL   N+ D  +  TGG N YGAKL NIFST F +ETA      ++KQ +T+NM 
Sbjct: 1   MIFDPLLPDFNFYDGEETVTGGLNYYGAKLGNIFSTAFELETASKDLCLRFKQTWTDNMT 60

Query: 198 KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL 257
               P +     G N+TK +F PDL KF M  L  D +AL+ +R  ++A      V V L
Sbjct: 61  LAETPVVEP-YSGPNYTKNTFSPDLDKFRMDSLNKDTIALLSRRAFEVATST-PGVNVYL 118

Query: 258 NGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGI 309
           N   +P+ +F EY+D+  K         +    E VNERW+I V +SE  FQQ+S  N  
Sbjct: 119 NDKPLPINNFKEYLDLCLKGKVDCLGAQLKCVFEAVNERWDIAVAVSEHGFQQISLANKC 178

Query: 310 ATIKGGTHVDYV 321
            T KGG HVDY+
Sbjct: 179 CTTKGGRHVDYI 190


>gi|310722590|ref|YP_003969413.1| unnamed protein product [Aeromonas phage phiAS5]
 gi|306021433|gb|ADM79967.1| topoisomerase II medium subunit [Aeromonas phage phiAS5]
          Length = 438

 Score =  140 bits (353), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 197/389 (50%), Gaps = 25/389 (6%)

Query: 703  SDFVNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSFK---RNFIKEAKVAQFSGYV 758
            S  VN E   F+M  ++ R++PSMVDGLKP QR IL+   K   ++F K A +A   G +
Sbjct: 9    SSLVNNEAKEFAMYTIEERALPSMVDGLKPVQRYILYSVLKNAGKSFKKNAAIA---GVI 65

Query: 759  SEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLS 818
            SE+  Y+HGE +       MA  +  +NN  ++Q  G FG+R    ++ A+ARYIF    
Sbjct: 66   SEY-GYNHGEVAAMDAACLMASTW--NNNFPIIQGQGNFGSR--AVQEGAAARYIFCTKH 120

Query: 819  PITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRD 878
                 +F   D +LL+    DG ++ P +Y+PI+PTVL+NG  GI TG+++ I  ++   
Sbjct: 121  DQFDSMFK--DMELLEESTADGSEL-PRYYLPILPTVLLNGVSGIATGFATKILPHSLVS 177

Query: 879  IVANVRRLL-NGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKEL 937
            +   V ++L  G+  EP    +  F G I     K     +T+ G  E   +T L I E+
Sbjct: 178  VAKCVEQVLKTGKCDEP-QIQFPLFYGKITPVVDKNQA--WTLEGCYELSGKTKLTISEI 234

Query: 938  PIRRWTQDYREFLESIIDQNDSFIRGFRQYS-DDTTVDFEVFLSEESMMRTKQEGLLKKF 996
            P++     Y   L+ +++ +   I G+ +   DD    F++ L  +    T  E ++K F
Sbjct: 235  PVKYDRVKYVTLLDKLVETDK--IVGYDESKMDDREFCFKITLKRD--FDTSHENIIKTF 290

Query: 997  KLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLE 1056
            KL   +S   + + D  G +K Y+    ++ +F + R    +KR    +     +L   +
Sbjct: 291  KLAQNVS-QYIRVIDQNGDLKPYEKASDLIVDFVNYRFGILQKRIDNAIVATTEKLGYAQ 349

Query: 1057 NKVRFILGVVNGEIVVNNRKRTDLLLELR 1085
             KV FI  V++ +I  + + R  ++ +++
Sbjct: 350  AKVEFIKLVLDEKIKFHKQTRKQVIEQIQ 378


>gi|204022148|dbj|BAG71159.1| topoisomerase 2 [Trichophyton tonsurans]
 gi|204022150|dbj|BAG71160.1| topoisomerase 2 [Trichophyton quinckeanum]
 gi|204022152|dbj|BAG71161.1| topoisomerase 2 [Arthroderma benhamiae]
 gi|204022154|dbj|BAG71162.1| topoisomerase 2 [Arthroderma benhamiae]
 gi|204022156|dbj|BAG71163.1| topoisomerase 2 [Arthroderma simii]
 gi|204022158|dbj|BAG71164.1| topoisomerase 2 [Arthroderma simii]
 gi|204022160|dbj|BAG71165.1| topoisomerase 2 [Arthroderma simii]
 gi|204022162|dbj|BAG71166.1| topoisomerase 2 [Arthroderma simii]
 gi|204022164|dbj|BAG71167.1| topoisomerase 2 [Arthroderma simii]
 gi|204022166|dbj|BAG71168.1| topoisomerase 2 [Arthroderma simii]
 gi|204022174|dbj|BAG71172.1| topoisomerase 2 [Trichophyton violaceum]
 gi|204022182|dbj|BAG71176.1| topoisomerase 2 [Arthroderma benhamiae]
 gi|204022220|dbj|BAG71195.1| topoisomerase 2 [Arthroderma simii]
 gi|309243013|dbj|BAJ23035.1| topoisomerase 2 [Trichophyton interdigitale]
 gi|309243019|dbj|BAJ23038.1| topoisomerase 2 [Arthroderma benhamiae]
 gi|309243021|dbj|BAJ23039.1| topoisomerase 2 [Arthroderma benhamiae]
          Length = 101

 Score =  140 bits (352), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 64/100 (64%), Positives = 80/100 (80%)

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
           DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D  +K 
Sbjct: 1   DPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEQIYIPELIFGHLLTSSNYNDMQEKV 60

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
           TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM
Sbjct: 61  TGGRNGYGAKLCNIFSNEFTVETADSKQKKKFKLTWTNNM 100


>gi|160941457|ref|ZP_02088792.1| hypothetical protein CLOBOL_06348 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435603|gb|EDP13370.1| hypothetical protein CLOBOL_06348 [Clostridium bolteae ATCC
           BAA-613]
          Length = 637

 Score =  140 bits (352), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 166/639 (25%), Positives = 276/639 (43%), Gaps = 119/639 (18%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS                           GL+ +  EI+ NA D +  
Sbjct: 16  LEAVRKRPGMYIGSTSAR-----------------------GLHHLVYEIVDNAVD-EAL 51

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D++ V I++++  I+V + G G+PV+I ++ G+   E++F  L     + +   K 
Sbjct: 52  AGYCDSIDVTINEDNS-ITVMDDGRGIPVDIQKKAGLPAVEVVFTILHAGGKFGNGGYKV 110

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP--NISKCKEGDNWT 214
           +GG +G GA + N  S    ++      +  Y+Q +    GK + P   + KC    + T
Sbjct: 111 SGGLHGVGASVVNALSEWLEVQVYKDGNI--YQQRYER--GKVTYPLKIVGKCGPEQHGT 166

Query: 215 KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK--------S 266
           +V+F PD   F  T  + D    +K R+ + A  L K++K+ L   R   K         
Sbjct: 167 RVTFLPDKEIFEETVYDYDT---LKIRLRETA-FLTKNLKIILKDDRDEKKEKVFHYEGG 222

Query: 267 FAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVS-------------FVNGIATIK 313
             E+V    K  T  +++V      C    EG + +VS             FVN I T +
Sbjct: 223 IKEFVTYLNKGKTPIYDQVI----YCEGTREGVYVEVSMQHNDSYTENIYTFVNNINTPE 278

Query: 314 GGTHVDYVANQVANHVMAVVNKK----NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTK 369
           GGTH+    N +         +K    +   N+   +++  L   ++  I++P F+ QTK
Sbjct: 279 GGTHLTGFKNALTKTFNDYAREKKLLKDSEDNLSGEDIREGLTAIISVKIEDPQFEGQTK 338

Query: 370 ETLTLRQSSFGSKCELSEE---FLKK--VTAKSGIVETLLSWANFKQSK---DLKKNDGT 421
           + L   ++       +SE+   FL++    AKS   +++L+      ++   DL +    
Sbjct: 339 QKLGNSEARAAVDNIVSEQLTYFLEQNPAVAKSMCEKSILAQRARAAARKARDLTR---- 394

Query: 422 KTEDVRGIS---KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLR 478
           +   + G++   KL D +    +N E C + + EGDSA   A    S   R    + PLR
Sbjct: 395 RKSALDGMALPGKLADCS---DKNPENCEIYIVEGDSAGGSAKTARS---RATQAILPLR 448

Query: 479 GKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN-NVKSLRYGHLMIMTDQVLLAPLS 537
           GK+LNV +A  +++  N+EI  +  I     G+  + ++  LRY  ++IMTD        
Sbjct: 449 GKILNVEKARMDRIYGNAEIKAM--ITAFGTGIHDDFDISKLRYHKIIIMTDA------- 499

Query: 538 FLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA 597
                                D DG+HI  LL+ FI+ F P L+K     V    P +  
Sbjct: 500 ---------------------DVDGAHISTLLLTFIYRFMPELIK--QGYVYLAQPPLYK 536

Query: 598 TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
             KN KV   YS  +  +  + +G + S+  I+ YKGLG
Sbjct: 537 VEKNKKVWYAYSDDELNSILKEIGRDNSN-KIQRYKGLG 574


>gi|204022168|dbj|BAG71169.1| topoisomerase 2 [Trichophyton raubitschekii]
 gi|204022170|dbj|BAG71170.1| topoisomerase 2 [Trichophyton kanei]
 gi|204022172|dbj|BAG71171.1| topoisomerase 2 [Trichophyton fischeri]
 gi|204022176|dbj|BAG71173.1| topoisomerase 2 [Trichophyton rubrum]
 gi|309243023|dbj|BAJ23040.1| topoisomerase 2 [Trichophyton rubrum]
          Length = 101

 Score =  140 bits (352), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 64/100 (64%), Positives = 80/100 (80%)

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
           DP M  ++V +D+E   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D  +K 
Sbjct: 1   DPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEQIYIPELIFGHLLTSSNYNDMQEKV 60

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
           TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM
Sbjct: 61  TGGRNGYGAKLCNIFSKEFTVETADSKQKKKFKLTWTNNM 100


>gi|355674400|ref|ZP_09059585.1| DNA gyrase subunit B [Clostridium citroniae WAL-17108]
 gi|354813963|gb|EHE98566.1| DNA gyrase subunit B [Clostridium citroniae WAL-17108]
          Length = 637

 Score =  139 bits (351), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 163/635 (25%), Positives = 260/635 (40%), Gaps = 111/635 (17%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS                           GL+ +  EI+ NA D +  
Sbjct: 16  LEAVRKRPGMYIGSTSAR-----------------------GLHHLVYEIVDNAVD-EAL 51

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D++ V I+ ++  I+V + G G+PV+I ++ G+   E++F  L     + +   K 
Sbjct: 52  AGYCDSIDVTINSDNS-ITVVDDGRGIPVDIQKKAGLPAVEVVFTILHAGGKFGNGGYKV 110

Query: 157 TGGRNGYGAKLTNIFSTEFIIET-ADGKRLKKYKQVFTNNMGKKSEP--NISKCKEGDNW 213
           +GG +G GA + N  S    ++   DG     Y+Q +    GK + P   + KC    + 
Sbjct: 111 SGGLHGVGASVVNALSEWLEVQVFKDGN---IYQQRYQR--GKVTYPLKIVGKCGPEQHG 165

Query: 214 TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK-------- 265
           TKV+F PD   F  T  + D    +K R+ + A  L K++++ L   R   K        
Sbjct: 166 TKVTFLPDTEIFEETEYDYDT---LKIRLRETA-FLTKNLRITLRDEREEKKEKTFHYEG 221

Query: 266 SFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVS-------------FVNGIATI 312
              E+V    K  T  +E+V      C    EG F +VS             FVN I T 
Sbjct: 222 GIKEFVTYLNKGKTPLYEQVI----YCEGTKEGVFVEVSMQHNDSYTENIYTFVNNINTP 277

Query: 313 KGGTHVDYVANQVANHVMAVVNK----KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQT 368
           +GGTH+    N +         K    K    ++   +++  L   ++  +  P F+ QT
Sbjct: 278 EGGTHLTGFKNALTKTFNDYARKNKLLKENEDSLSGEDIREGLTAIISIKVAEPQFEGQT 337

Query: 369 KETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRG 428
           K+ L   ++       +SE+    +    GI + +   +   Q            +  R 
Sbjct: 338 KQKLGNSEARTAVDNIVSEQLTYFLEQNPGIAKAMCEKSILAQRARAAAR--KARDLTRR 395

Query: 429 ISKLEDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
            S L+   L G       +N E C + + EGDSA   A    S   R    + PLRGK+L
Sbjct: 396 KSALDGMALPGKLADCSDKNPENCEIYIVEGDSAGGSAKTARS---RATQAILPLRGKIL 452

Query: 483 NVREASSNQVLNNSEIGNIKKILGLKQGVEYN-NVKSLRYGHLMIMTDQVLLAPLSFLLW 541
           NV +A  +++  N+EI  +  I     G+  + ++  LRY  ++IMTD            
Sbjct: 453 NVEKARMDRIYGNAEIKAM--ITAFGTGIHEDFDISKLRYHKIIIMTDA----------- 499

Query: 542 FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
                            D DG+HI  LL+ F++ F P L+K     V    P +    KN
Sbjct: 500 -----------------DVDGAHISTLLLTFLYRFMPELIK--QGYVYLAQPPLYKIEKN 540

Query: 602 GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
            KV   YS  +  +    +G + ++  I+ YKGLG
Sbjct: 541 KKVWYAYSDDELNSIMMEIGRDTNN-KIQRYKGLG 574


>gi|302380141|ref|ZP_07268614.1| DNA gyrase, B subunit [Finegoldia magna ACS-171-V-Col3]
 gi|302312083|gb|EFK94091.1| DNA gyrase, B subunit [Finegoldia magna ACS-171-V-Col3]
          Length = 638

 Score =  139 bits (351), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 170/640 (26%), Positives = 265/640 (41%), Gaps = 122/640 (19%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE + +RP  YIGS ++                        GL+ +  E++ N+ D    
Sbjct: 18  LEPVRVRPGMYIGSTDE-----------------------KGLHHLVYEVVDNSIDEALA 54

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D +KV I +++ +I V + G G+PVE H + G    E +   L     + ++  + 
Sbjct: 55  GV-CDLIKVTIKKDNSII-VEDDGSGIPVETHPKTGKSTLETVLTVLHAGGKFSNDAYQY 112

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEG--DNW 213
           +GG +G G    N  ST  I     DGK    Y+Q F      K+   ++  KE      
Sbjct: 113 SGGLHGVGVSCVNALSTYLIARVKRDGKM---YEQRFEKG---KTVTGLTVVKENVRGTG 166

Query: 214 TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR----------VP 263
           T + F PD   F   + + +V+A   KR  ++A  L K VK+E    R            
Sbjct: 167 TTIEFMPDDTIFETLNFDRNVLA---KRFREMA-FLNKGVKIEFADERDGYKELFHYEGG 222

Query: 264 VKSFAEYVDMYPKSVTR-----FHERVNERWEICVTLSEGQFQQ-VSFVNGIATIKGGTH 317
           +KSF EY++   K +         E+   + EI +  +E   +  VSF N I T+ GGTH
Sbjct: 223 IKSFVEYINKSKKPLDHEVMYIEGEKDTTKVEIAMQYTESYNETIVSFTNNIKTVDGGTH 282

Query: 318 V------------DYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFD 365
           V            DY  N+           K K+ N+   +V+  +   V+  ++NP F+
Sbjct: 283 VVGFKSALTRALNDYARNKSI--------LKEKDDNLSGDDVREGITAVVSVKLNNPQFE 334

Query: 366 SQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED 425
            QTK  L   ++       + E           IV T++  A    S+  +       + 
Sbjct: 335 GQTKGKLGNSEARTVVDSVVYEHLSFYFEENPKIVRTIIQKA--LASQKARLAARRARDL 392

Query: 426 VRGISKLEDANLAGGRNSEQCT------LILTEGDSAKALAMAGLSVVGRD-RF-GVFPL 477
           VR  S L++  L G     Q +      + L EGDSA   A       GRD +F  + PL
Sbjct: 393 VRKKSVLDNTTLPGKLADCQSSDIEYNEIFLVEGDSAGGSAKG-----GRDNKFQAILPL 447

Query: 478 RGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLS 537
           RGK+LNV +A   +VLN+ EI  +    G   G  + ++  LRYG ++IMTD        
Sbjct: 448 RGKILNVEKAHLERVLNSEEIKAMITAFGTGIGKNF-DISKLRYGKIVIMTD-------- 498

Query: 538 FLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA 597
                                D DG+HI+ LL+ F++ F   L++     V    P +  
Sbjct: 499 --------------------ADVDGAHIRTLLLTFLYRFMKPLVEKGH--VYIAQPPLYG 536

Query: 598 TNKNGKVLSF-YSMPDYEAWKESLGGNASSWSIKYYKGLG 636
             K  KV+ + Y+  + E   E   G  S+  ++ YKGLG
Sbjct: 537 IIKGVKVMEYCYTEQELEEALEKY-GERSNIKVQRYKGLG 575


>gi|335045176|ref|ZP_08538199.1| DNA gyrase, B subunit [Oribacterium sp. oral taxon 108 str. F0425]
 gi|333758962|gb|EGL36519.1| DNA gyrase, B subunit [Oribacterium sp. oral taxon 108 str. F0425]
          Length = 652

 Score =  139 bits (351), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 159/637 (24%), Positives = 278/637 (43%), Gaps = 103/637 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS                       + V GL+ +  EI+ N+ D +  
Sbjct: 31  LEAVRKRPGMYIGS-----------------------TSVRGLHHLVYEIVDNSVD-EAL 66

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D + V I +++  I+V + G G+PV+I ++ G    E++F  L     +  +  K 
Sbjct: 67  AGFCDNITVTIHKDNS-ITVEDDGRGIPVDIQKKAGKSALEVVFTVLHAGGKFGGSGYKV 125

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKV 216
           +GG +G GA + N  S+   ++    K  K Y   F+     K    I  C E ++ TKV
Sbjct: 126 SGGLHGVGASVVNALSS--FLDVTVCKDGKIYTMSFSKGKVIKEIECIGTCTEEEHGTKV 183

Query: 217 SFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG------------HRVPV 264
            F PD   F  +  + D    +K R+ + A  L K+++++L              +   +
Sbjct: 184 HFLPDAEIFEESIYDFDT---LKVRLRETA-FLTKNLRIKLIDEREEEIREMTFHYEGGI 239

Query: 265 KSFAEYVD-----MYPKSVTRFHERVNERWEICVTLSEGQFQQV-SFVNGIATIKGGTHV 318
           K F  Y++     +YP  +    E+     E+ +  ++   + + +FVN I T +GGTH+
Sbjct: 240 KEFVTYLNKGKEALYPDVIYCEGEKEQILVEVAMQHNDSYTENIYTFVNNINTPEGGTHL 299

Query: 319 DYVANQVANHV--MAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
               N +       A  NK  K+   N+   +++  L   ++  I++P F+ QTK+ L  
Sbjct: 300 TGFKNALTKTFNDYARQNKLLKDSEPNLSGEDIREGLTCIISVKIEDPQFEGQTKQKLGT 359

Query: 375 RQSSFGSKCELSEE---FLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
            ++    +  +SE+   FL++  A + ++      A   ++   K  D T+ +     S 
Sbjct: 360 SEAQVAVQGIVSEQLTYFLEQNPAVARVMCEKSIMAQRARAAARKARDLTRRK-----SA 414

Query: 432 LEDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
           L+   L G       +++E+C + + EGDSA   A  G +    +   V PLRGK+LNV+
Sbjct: 415 LDGVGLPGKLADCSSKDAERCEIFIVEGDSALGPAKEGRN---PETQAVLPLRGKVLNVQ 471

Query: 486 EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
           +A  +++  N EI  +    G     +++ +  LRY  ++IMTD                
Sbjct: 472 KARLDRIYANEEIKGMITAFGTGINEDFD-LSKLRYHKIIIMTDA--------------- 515

Query: 546 FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL 605
                        D DG+HI  L++ FI++F P L+K     V    P +    KN K  
Sbjct: 516 -------------DVDGAHISTLMLTFIYNFMPDLIKEGH--VYLAQPPLFNITKNKKHY 560

Query: 606 SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKE 642
             YS  +Y+   + +G  A    +  +KGLG   ++E
Sbjct: 561 YAYSDEEYQNILKEIG--AEGADVSRFKGLGEMDTEE 595


>gi|429762639|ref|ZP_19295025.1| DNA gyrase, B subunit protein [Anaerostipes hadrus DSM 3319]
 gi|429181273|gb|EKY22445.1| DNA gyrase, B subunit protein [Anaerostipes hadrus DSM 3319]
          Length = 637

 Score =  139 bits (351), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 159/635 (25%), Positives = 256/635 (40%), Gaps = 109/635 (17%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS+        IYE     ++  ++          DE L    D    
Sbjct: 17  LEAVRKRPGMYIGSVSTKGLNHLIYE-----IVDNSV----------DEFLAGYCDEITV 61

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D    + D          +G G+PV I++  G    E++F  L     + D   K 
Sbjct: 62  SLNKDGTATITD----------NGRGIPVGINERTGKTAVEMVFTMLHAGGKFGDGGYKI 111

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP--NISKCKEGDNWT 214
           +GG +G GA + N  ST   +    G ++  Y+Q +    GK   P   I  C++ D  T
Sbjct: 112 SGGLHGVGASVVNALSTWLTVTVKQGGKI--YQQRYER--GKIITPLEVIGTCRKSDTGT 167

Query: 215 KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKV----ELNGHRVPV-----K 265
            V F PD   F+ T+ +    A+++ R+ + A  L   + +    E  G    V     +
Sbjct: 168 NVQFLPDPEIFDKTYFK---AAMVRNRLHETA-YLNPKLTIHYVNEREGEETTVDYHEPE 223

Query: 266 SFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQ--------VSFVNGIATIKGGTH 317
               YV    +     HE V  +  I    +E  FQ         + F N I TI+GGTH
Sbjct: 224 GICAYVKKLNEGKQMLHEPVYFKRMIDGIEAEVAFQYTEDFGENILGFCNNIYTIEGGTH 283

Query: 318 VD-------YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
           +         + NQ A  +  +   K K++N    +V+N +   V+     P F+ QTK 
Sbjct: 284 ITGFKTKFTTIMNQYAREIGVL---KEKDSNFTGTDVRNGMTAIVSVKHPEPRFEGQTKT 340

Query: 371 TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV--RG 428
            L    ++        EE +         ++ +L+ A  K +K  K  +  KT  +  + 
Sbjct: 341 KLDNPDAAKAVGEIAGEELVLYFDKNLDTLKKVLACAE-KSAKIRKAEEKAKTNMLVKQK 399

Query: 429 ISKLEDANLAG--GRNSEQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNV 484
           +S   +  LA    R ++ C + + EGDSA      G +   R+R    + P+RGK+LNV
Sbjct: 400 LSIDSNGKLANCESRKAQDCEIFIVEGDSA-----GGSAKTARNRKTQAILPIRGKILNV 454

Query: 485 REASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLW 541
            +A+ ++VL N+EI  +    G      Y N   +  LRY  ++IMTD            
Sbjct: 455 EKATMDKVLANAEIKTMINAFGCGFSEGYGNDFDISKLRYHKIIIMTDA----------- 503

Query: 542 FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
                            D DG+HI  LL+ F + F P L+      +    P+ KA  + 
Sbjct: 504 -----------------DVDGAHIATLLLTFFYRFMPELITHGHVFLA-TPPLYKAMPQK 545

Query: 602 GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
           G+    +       ++    GN   ++++ YKGLG
Sbjct: 546 GEETYLFDDAALTRYRAEHKGN---FTLQRYKGLG 577


>gi|346309520|ref|ZP_08851605.1| DNA gyrase, B subunit [Dorea formicigenerans 4_6_53AFAA]
 gi|345898725|gb|EGX68587.1| DNA gyrase, B subunit [Dorea formicigenerans 4_6_53AFAA]
          Length = 643

 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 169/689 (24%), Positives = 297/689 (43%), Gaps = 119/689 (17%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS                           GL+ +  EI+ NA D +  
Sbjct: 21  LEAVRKRPGMYIGSTSSR-----------------------GLHHLVYEIVDNAVD-EAL 56

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D + V I+ ++  ++V ++G G+PV I+ + G+   E++F  L     +     K 
Sbjct: 57  AGFCDTIHVTINPDNS-VTVTDNGRGIPVGINHKSGLPAVEVVFTVLHAGGKFGGGGYKV 115

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKV 216
           +GG +G GA + N  S    +E     ++  Y+Q +      K    I +C+ G   TKV
Sbjct: 116 SGGLHGVGASVVNALSVWLEVEICHEGKV--YRQRYERGKVAKKLEVIGECEPGKTGTKV 173

Query: 217 SFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV--PV-KSF------ 267
           +F PD   F  T  +    +++++R  ++A  L K +K+ L   R   P+ K+F      
Sbjct: 174 TFLPDGEIFETTIFD---YSILQQRFREMA-FLTKGLKIVLRDERPQEPIEKTFHYEGGI 229

Query: 268 AEYVDMYPKSVTRFHERV--------NERWEICVTLSEGQFQQ-VSFVNGIATIKGGTHV 318
            E+V+   +S T  +E++        N   E+ +  ++   +    FVN I T +GGTH+
Sbjct: 230 KEFVEYLNRSTTPLYEQIIYCEGIVNNVSVEVAMQHNDSYNENSYGFVNNITTPEGGTHI 289

Query: 319 DYVANQVANHVMAVVNK----KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
               N +         K    K+   N+   +++  L   ++  I++P F+ QTK+ L  
Sbjct: 290 VGFRNALTKTFNDYARKNKLLKDNEPNLTGEDIREGLTAIISVKIEDPQFEGQTKQKLGN 349

Query: 375 RQSSFGSKCELSEEF---------LKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED 425
            ++       +SE+          + KVT +  ++      A  K     ++        
Sbjct: 350 SEARGAVDSVVSEQLQIFLEQNPQVAKVTVEKSVMAQRAREAARKARDLTRRKSALDGMS 409

Query: 426 VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF--GVFPLRGKLLN 483
           + G  KL D +    +N E+C + + EGDSA      G +   RDR    + PLRGK+LN
Sbjct: 410 LPG--KLADCS---DKNPEKCEIYIVEGDSA-----GGSAKTARDRATQAILPLRGKILN 459

Query: 484 VREASSNQVLNNSEIGNIKKILGLKQGVEYN-NVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
           V +A  +++  N+EI  +  I     G+  + ++  LRY  ++IMTD             
Sbjct: 460 VEKARLDRIYGNAEIKAM--ITAFGTGIHEDFDISKLRYHKIIIMTDA------------ 505

Query: 543 ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG 602
                           D DG+HI  LL+ F++ F P L+K     V    P +    +N 
Sbjct: 506 ----------------DVDGAHISTLLLTFMYRFMPDLIK--EGYVYLAQPPLYKLERNK 547

Query: 603 KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW--- 659
           KV   YS  + ++  + +G + ++  I+ YKGLG   +    E   + T+  +  V    
Sbjct: 548 KVWYAYSDEELDSILQEVGRDNNN-KIQRYKGLGEMDA----EQLWDTTMDPEHRVLLRV 602

Query: 660 -EDDQDGEAIELAFSK---KKIEARKKWL 684
             DD+    ++L F+     K+E R++++
Sbjct: 603 TMDDETASELDLTFTTLMGDKVEPRREFI 631


>gi|167766557|ref|ZP_02438610.1| hypothetical protein CLOSS21_01063 [Clostridium sp. SS2/1]
 gi|167711680|gb|EDS22259.1| DNA gyrase, B subunit, C-terminal domain protein [Clostridium sp.
           SS2/1]
 gi|291558595|emb|CBL37395.1| DNA topoisomerase IV subunit B [butyrate-producing bacterium SSC/2]
          Length = 637

 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 159/635 (25%), Positives = 256/635 (40%), Gaps = 109/635 (17%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS+        IYE     ++  ++          DE L    D    
Sbjct: 17  LEAVRKRPGMYIGSVSTKGLNHLIYE-----IVDNSV----------DEFLAGYCDEITV 61

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D    + D          +G G+PV I++  G    E++F  L     + D   K 
Sbjct: 62  SLNKDGTATITD----------NGRGIPVGINERTGKTAVEMVFTMLHAGGKFGDGGYKI 111

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP--NISKCKEGDNWT 214
           +GG +G GA + N  ST   +    G ++  Y+Q +    GK   P   I  C++ D  T
Sbjct: 112 SGGLHGVGASVVNALSTWLTVTVKQGGKV--YQQRYER--GKIITPLEVIGTCRKSDTGT 167

Query: 215 KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKV----ELNGHRVPV-----K 265
            V F PD   F+ T+ +    A+++ R+ + A  L   + +    E  G    V     +
Sbjct: 168 NVQFLPDPEIFDKTYFK---AAMVRNRLHETA-YLNPKLTIHYVNEREGEETTVDYHEPE 223

Query: 266 SFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQ--------VSFVNGIATIKGGTH 317
               YV    +     HE V  +  I    +E  FQ         + F N I TI+GGTH
Sbjct: 224 GICAYVKKLNEGKQMLHEPVYFKRMIDGIEAEVAFQYTEDFGENILGFCNNIYTIEGGTH 283

Query: 318 VD-------YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
           +         + NQ A  +  +   K K++N    +V+N +   V+     P F+ QTK 
Sbjct: 284 ITGFKTKFTTIMNQYAREIGVL---KEKDSNFTGTDVRNGMTAIVSVKHPEPRFEGQTKT 340

Query: 371 TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV--RG 428
            L    ++        EE +         ++ +L+ A  K +K  K  +  KT  +  + 
Sbjct: 341 KLDNPDAAKAVGEIAGEELVLYFDKNLDTLKKVLACAE-KSAKIRKAEEKAKTNMLVKQK 399

Query: 429 ISKLEDANLAG--GRNSEQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNV 484
           +S   +  LA    R ++ C + + EGDSA      G +   R+R    + P+RGK+LNV
Sbjct: 400 LSIDSNGKLANCESRKAQDCEIFIVEGDSA-----GGSAKTARNRKTQAILPIRGKILNV 454

Query: 485 REASSNQVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLW 541
            +A+ ++VL N+EI  +    G      Y N   +  LRY  ++IMTD            
Sbjct: 455 EKATMDKVLANAEIKTMINAFGCGFSEGYGNDFDISKLRYHKIIIMTDA----------- 503

Query: 542 FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
                            D DG+HI  LL+ F + F P L+      +    P+ KA  + 
Sbjct: 504 -----------------DVDGAHIATLLLTFFYRFMPELITHGHVFLA-TPPLYKAMPQK 545

Query: 602 GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
           G+    +       ++    GN   ++++ YKGLG
Sbjct: 546 GEETYLFDDAALTRYRAEHKGN---FTLQRYKGLG 577


>gi|336452874|ref|YP_004607340.1| DNA gyrase subunit B [Helicobacter bizzozeronii CIII-1]
 gi|335332901|emb|CCB79628.1| DNA gyrase subunit B [Helicobacter bizzozeronii CIII-1]
          Length = 768

 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 147/578 (25%), Positives = 245/578 (42%), Gaps = 107/578 (18%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIG+                       + + GL+ +  EI+ N+ D    
Sbjct: 15  LEGVRARPGMYIGN-----------------------TNIDGLHHLVYEIVDNSIDESMA 51

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               + +K+ + Q +    V ++G G+PV+IH  EG+    L    L     +D    K 
Sbjct: 52  G-FCNQIKITLTQ-YGSCMVEDNGRGIPVDIHSTEGIPAATLALTTLHAGGKFDKQTYKV 109

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKV 216
           +GG +G G  + N  ST+ I+    G ++  ++Q F   +       +   KE    T +
Sbjct: 110 SGGLHGVGVSVVNALSTKLIMTIKRGGQI--FRQEFAKGIPTTPLEVVGTTKE--QGTSI 165

Query: 217 SFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPK 276
            F PD +   +   +  V   ++KR  ++A  L   V +        +K    Y +   +
Sbjct: 166 EFFPDPSIMEVVAFDSSV---LQKRFQEMA-YLNHGVTIHFEDQPNQIKETYHYTEGLKQ 221

Query: 277 ------------SVTRFHERVNE-RWEICVTLSEGQFQQV-SFVNGIATIKGGTHVD--- 319
                        V  F  +  +   EI +  +EG  +Q+ SFVN I T +GGTH     
Sbjct: 222 FILDTNKNPLISEVIAFSAQAEDMEVEIALAYNEGYSEQMFSFVNSIRTPEGGTHESGFR 281

Query: 320 -YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSS 378
             ++  + N++    N + K A V   ++K  L   V+A I  P F+ QTK  L    SS
Sbjct: 282 MGLSRAILNYIQENANAREKEAGVVQEDIKEGLLAVVSARILEPQFEGQTKAKLG---SS 338

Query: 379 FGSKC-------ELSEEFLKKVTAKSGIVETLLSWAN----FKQSKDL-KKNDGTKTEDV 426
           F           ++++ F +  +    I++  L  A      K++K+L +K D      +
Sbjct: 339 FVRPVVAKLVYEKMAKFFEENPSVARAIMQKALLAAKGREAAKKAKELTRKKDNLSVGTL 398

Query: 427 RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF--GVFPLRGKLLNV 484
            G  KL D      ++ ++C + L EGDSA      G +  GRDR    + PLRGK+LNV
Sbjct: 399 PG--KLADCQ---SKDPKECEIYLVEGDSA-----GGSAKQGRDRVFQAILPLRGKILNV 448

Query: 485 REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            ++  +++L + EI N+    G   G E+ N++ LRY  ++IMTD               
Sbjct: 449 EKSHLSKILKSEEIKNMITAFGCGVGQEF-NLEKLRYHKIIIMTD--------------- 492

Query: 545 IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK 582
                         D DGSHI+ LL+ F + +   L++
Sbjct: 493 -------------ADVDGSHIQTLLMTFFYRYLKPLIE 517


>gi|297829358|ref|XP_002882561.1| hypothetical protein ARALYDRAFT_896968 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297328401|gb|EFH58820.1| hypothetical protein ARALYDRAFT_896968 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 178

 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/181 (52%), Positives = 126/181 (69%), Gaps = 12/181 (6%)

Query: 984  MMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKV 1043
            M+  +QEG LKKF LTTT +TSNMHLFD +GVIKKY TPEQILEEFF +RLE+YEKRK++
Sbjct: 1    MLAARQEGFLKKFNLTTTSATSNMHLFDKEGVIKKYATPEQILEEFFDLRLEYYEKRKEI 60

Query: 1044 QLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVV 1103
             L+NLELELLKLE+KV+FI G ++GEI + NRK+ D+  +LRQ+GFTP PK      A V
Sbjct: 61   MLKNLELELLKLESKVKFIRGFLSGEIRIFNRKKADIAQDLRQRGFTPVPKK-----ATV 115

Query: 1104 AGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
            +G       + +  E        DYDYL  + +   ++EK + L A+ DK  E+++ L+K
Sbjct: 116  SG-------TSDAAEESEDESESDYDYLGKLTMEMFSVEKTEELCAEIDKTKEQLEYLKK 168

Query: 1164 A 1164
            A
Sbjct: 169  A 169


>gi|204022178|dbj|BAG71174.1| topoisomerase 2 [Trichophyton verrucosum]
          Length = 101

 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/100 (64%), Positives = 79/100 (79%)

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
           DP M  ++V +D+E   ISV N+G G+PVEIH++E  Y+PELIFGHLLTSSNY+D  +K 
Sbjct: 1   DPNMSEIRVTLDKEAGEISVWNNGRGIPVEIHKKEQTYIPELIFGHLLTSSNYNDMQEKV 60

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
           TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM
Sbjct: 61  TGGRNGYGAKLCNIFSNEFTVETADSKQKKKFKLTWTNNM 100


>gi|204022180|dbj|BAG71175.1| topoisomerase 2 [Trichophyton concentricum]
 gi|309243015|dbj|BAJ23036.1| topoisomerase 2 [Arthroderma benhamiae]
 gi|309243017|dbj|BAJ23037.1| topoisomerase 2 [Arthroderma benhamiae]
          Length = 101

 Score =  139 bits (350), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 63/100 (63%), Positives = 80/100 (80%)

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
           DP M  ++V +D++   ISV N+G G+PVEIH++E +Y+PELIFGHLLTSSNY+D  +K 
Sbjct: 1   DPNMSEIRVTLDKQAGEISVWNNGRGIPVEIHKKEQIYIPELIFGHLLTSSNYNDMQEKV 60

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
           TGGRNGYGAKL NIFS EF +ETAD K+ KK+K  +TNNM
Sbjct: 61  TGGRNGYGAKLCNIFSNEFTVETADSKQKKKFKLTWTNNM 100


>gi|357056605|ref|ZP_09117644.1| DNA gyrase subunit B [Clostridium clostridioforme 2_1_49FAA]
 gi|355379970|gb|EHG27117.1| DNA gyrase subunit B [Clostridium clostridioforme 2_1_49FAA]
          Length = 637

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 166/635 (26%), Positives = 273/635 (42%), Gaps = 111/635 (17%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS                           GL+ +  EI+ NA D +  
Sbjct: 16  LEAVRKRPGMYIGSTSAR-----------------------GLHHLVYEIVDNAVD-EAL 51

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D++ V I++++  I+V + G G+PV+I ++ G+   E++F  L     + +   K 
Sbjct: 52  AGYCDSIDVTINEDNS-ITVVDDGRGIPVDIQKKAGLPAVEVVFTILHAGGKFGNGGYKV 110

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEP--NISKCKEGDNWT 214
           +GG +G GA + N  S    ++      +  Y+Q +    GK + P   + KC    + T
Sbjct: 111 SGGLHGVGASVVNALSEWLEVQVYKDGNI--YQQRYER--GKVTYPLKIVGKCGPEQHGT 166

Query: 215 KVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY 274
           KV+F PD   F  T  + D    +K R+ + A  L K++K+ L  +R   K   E V  Y
Sbjct: 167 KVTFLPDKEIFEETVYDYDT---LKIRLRETA-FLTKNLKIILKDNREEKK---EKVFHY 219

Query: 275 PKSVTRFHERVN-------ERWEICVTLSEGQFQQVS-------------FVNGIATIKG 314
              +  F   +N       ++   C    EG + +VS             FVN I T +G
Sbjct: 220 EGGIKEFVTYLNRGKTPIYDQVIYCEGTREGVYVEVSMQHNDSYTENIYTFVNNINTPEG 279

Query: 315 GTHVDYVANQVANHVMAVVNKK----NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
           GTH+    N +         +K    +   N+   +++  L   ++  I++P F+ QTK+
Sbjct: 280 GTHLTGFKNALTKTFNDYAREKKLLKDSEDNLSGEDIREGLTAIISVKIEDPQFEGQTKQ 339

Query: 371 TLTLRQSSFGSKCELSEE---FLKK--VTAKSGIVETLLSWANFKQSKDLKKNDGTKTED 425
            L   ++       +SE+   FL++    AKS I E  +     + +    ++   +   
Sbjct: 340 KLGNSEARAAVDNIVSEQLTYFLEQNPAVAKS-ICEKSILAQRARAAARKARDLTRRKSA 398

Query: 426 VRGIS---KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLL 482
           + G++   KL D +    +N E C + + EGDSA   A    S   R    + PLRGK+L
Sbjct: 399 LDGMALPGKLADCS---DKNPENCEIYIVEGDSAGGSAKTARS---RATQAILPLRGKIL 452

Query: 483 NVREASSNQVLNNSEIGNIKKILGLKQGVEYN-NVKSLRYGHLMIMTDQVLLAPLSFLLW 541
           NV +A  +++  N+EI  +  I     G+  + ++  LRY  ++IMTD            
Sbjct: 453 NVEKARMDRIYGNAEIKAM--ITAFGTGIHDDFDISKLRYHKIIIMTDA----------- 499

Query: 542 FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
                            D DG+HI  LL+ FI+ F P L+K     V    P +    KN
Sbjct: 500 -----------------DVDGAHISTLLLTFIYRFMPELIK--QGYVYLAQPPLYKVEKN 540

Query: 602 GKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
            KV   YS  +  +    +G + S+  I+ YKGLG
Sbjct: 541 KKVWYAYSDEELNSILMDIGRDNSN-KIQRYKGLG 574


>gi|193216448|ref|YP_001999690.1| topoiosmerase IV subunit B [Mycoplasma arthritidis 158L3-1]
 gi|193001771|gb|ACF06986.1| topoiosmerase IV subunit B [Mycoplasma arthritidis 158L3-1]
          Length = 637

 Score =  139 bits (349), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 171/640 (26%), Positives = 271/640 (42%), Gaps = 123/640 (19%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           L+ +  RP  YIGS +                       + GL+ +  EI+ NA D    
Sbjct: 15  LDAVRKRPGMYIGSTD-----------------------ITGLHHLVWEIVDNALDEALA 51

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D +KV + ++  +I V ++G G+PV  H   G    EL+F  L     +D+ V KT
Sbjct: 52  GFATD-IKVTLKKDDSVI-VEDNGRGIPVSKHGS-GKTGVELVFTELHAGGKFDEGVYKT 108

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDN---- 212
           +GG +G G+ + N  S + I++    K  K+YK VF  +          K  EG N    
Sbjct: 109 SGGLHGVGSSVVNALSEKLIVKVYRDK--KEYKTVFEQD----------KIIEGTNVVGP 156

Query: 213 ----WTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELN----GHRVPV 264
                TKV F PD   F  T    D+V    K  +  A  L  ++K+  N    G  +  
Sbjct: 157 TTKHGTKVQFWPDKTIFKKTKFSSDIV----KEKLREASFLIPNLKIHFNHEESGEAITF 212

Query: 265 KSFAEYVDMYPKSVTRFHERVNERW-----------EICVTLSEGQFQQV-SFVNGIATI 312
           ++ AE +  Y K V      ++  +           EI +  ++   + + SFVN + T 
Sbjct: 213 EA-AEGIKEYIKFVGEGKNFISSIFYAKGTFKKIEMEIALVYTDNYTENIYSFVNNVKTR 271

Query: 313 KGGTHVDYVANQVANHVMAVVNK----KNKNANVKAHNVKNHLWVFVNALIDNPA--FDS 366
            GGTH     + +   +    ++    KNKN N +  +V+  +   V+  I      F  
Sbjct: 272 DGGTHETAFKSALTKTINEYASQHNLLKNKN-NFEGDDVREGIIAVVSLKIPESILEFVG 330

Query: 367 QTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV 426
           QTK+ L   ++    +   SE+F   +       + +L+    K+S D +    T   ++
Sbjct: 331 QTKDKLGTLEAREAVEDFFSEKFGFYLNENKLDSDKILN--KIKKSYDARMAARTARNEI 388

Query: 427 RGI-SKLEDANLAGG-------RNSEQCTLILTEGDSAKALAMAGLSVVGRDRF--GVFP 476
           R I +KLE+  +  G       +NS    L L EGDSA      G + +GRDR    + P
Sbjct: 389 RKIKNKLENKKILSGKLTPAQTKNSSLKELFLVEGDSA-----GGSAKMGRDRNTQAILP 443

Query: 477 LRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPL 536
           LRGK++N  +A    +L+N EI  I   +G   G ++ N+K+ +YG ++IMTD       
Sbjct: 444 LRGKVINTVKAKLTDILSNEEIATIINTIGAGIGQDF-NIKNSQYGKIIIMTD------- 495

Query: 537 SFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK 596
                                 D DG+HI+ LL+ F + +   L+      +  + P+ K
Sbjct: 496 ---------------------ADTDGAHIQVLLLTFFYRYMKKLIDAGMVYIA-LPPLYK 533

Query: 597 ATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
            T K  K   FY   D E     L    S++ I+ YKGLG
Sbjct: 534 LTVKGAKAKHFYVWDDDEL--RDLTSKYSNYEIQRYKGLG 571


>gi|404483764|ref|ZP_11018981.1| DNA gyrase, B subunit [Clostridiales bacterium OBRC5-5]
 gi|404343123|gb|EJZ69490.1| DNA gyrase, B subunit [Clostridiales bacterium OBRC5-5]
          Length = 637

 Score =  139 bits (349), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 173/634 (27%), Positives = 285/634 (44%), Gaps = 109/634 (17%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE + +RP  YIGSI                          GL+ +  EI+ N+ D    
Sbjct: 16  LEAVRVRPGMYIGSISSR-----------------------GLHHLVYEIVDNSVDEALA 52

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               + +KV I++++  I+V ++G G+PV+I Q+ G    E++F  L     +     KT
Sbjct: 53  GFCTE-IKVKINEDNS-ITVRDNGRGIPVDIQQKAGKPALEVVFTILHAGGKFGGGGYKT 110

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKV 216
           +GG +G GA + N  ST   ++    K  K Y   F      ++   I +C   ++ T+V
Sbjct: 111 SGGLHGVGASVVNALSTWLDVKVY--KEGKIYHMRFEKGKVVENMHVIGECDPSESGTEV 168

Query: 217 SFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP-----------VK 265
           SF PD   F  T  + D+   +K R+ + A  L K++K+ L   RV            +K
Sbjct: 169 SFLPDADIFEETVYDFDI---LKVRLRETA-FLTKALKIVLIDDRVEKKEMSFHYEGGIK 224

Query: 266 SFAEYVD-----MYPKSVTRFHERVNERWEICV------TLSEGQFQQVSFVNGIATIKG 314
            F  Y++     +Y + +  + E V E   + V      T SEG +   +FVN I T +G
Sbjct: 225 EFVTYLNKGKAPIYDEVI--YCEGVKENVVVEVAMQHNDTYSEGIY---TFVNNINTPEG 279

Query: 315 GTHVDYVANQVANHV--MAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
           GTH+    N +       A  NK  K    N+   +++  L   ++  I +P F+ QTK+
Sbjct: 280 GTHLSGFKNALTKTFNEYARNNKLLKENEDNLSGEDIREGLVAIISVKIQDPQFEGQTKQ 339

Query: 371 TLTLRQSSFGSKCELSEE---FLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED-V 426
            L   ++       +SE+   FL++    + ++      A   ++   K  D T+ +  +
Sbjct: 340 KLGNSEAQTAVNAIVSEKLTYFLEQNPGIAKLISDKAITAQRARAAARKARDLTRRKSAL 399

Query: 427 RGIS---KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLN 483
            G+S   KL D +    +N E+C + + EGDSA   A    S   RD   + PLRGK+LN
Sbjct: 400 DGMSLPGKLADCS---SKNPEECEIFIVEGDSAGGSAK---SARKRDTQAILPLRGKILN 453

Query: 484 VREASSNQVLNNSEIGNIKKILGLKQGVEYN-NVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
           V +A  ++V +N+EI ++  I     G++ + ++  LRY  ++IMTD             
Sbjct: 454 VEKARPDKVYSNAEIKSM--ITAFGTGIQEDFDIGKLRYNKIIIMTD------------- 498

Query: 543 ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG 602
                           D DG+HI  L++ FI+ F P L+K     V    P +    KN 
Sbjct: 499 ---------------ADVDGAHIDTLMLTFIYRFMPELIK--EGHVYLAQPPLYKLEKNK 541

Query: 603 KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
           KV   YS  + +   + +G + ++  I+ YKGLG
Sbjct: 542 KVWYAYSDEELDNILKEVGRDQNN-KIQRYKGLG 574


>gi|166032886|ref|ZP_02235715.1| hypothetical protein DORFOR_02607 [Dorea formicigenerans ATCC
           27755]
 gi|166027243|gb|EDR46000.1| DNA gyrase, B subunit [Dorea formicigenerans ATCC 27755]
          Length = 643

 Score =  139 bits (349), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 169/689 (24%), Positives = 297/689 (43%), Gaps = 119/689 (17%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS                           GL+ +  EI+ NA D +  
Sbjct: 21  LEAVRKRPGMYIGSTSSR-----------------------GLHHLVYEIVDNAVD-EAL 56

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D + V I+ ++  ++V ++G G+PV I+ + G+   E++F  L     +     K 
Sbjct: 57  AGFCDTIHVTINPDNS-VTVTDNGRGIPVGINHKSGLPAVEVVFTVLHAGGKFGGGGYKV 115

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKV 216
           +GG +G GA + N  S    +E     ++  Y+Q +      K    I +C+ G   TKV
Sbjct: 116 SGGLHGVGASVVNALSVWLEVEICHEGKV--YRQRYERGKVAKKLEVIGECEPGKTGTKV 173

Query: 217 SFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRV--PV-KSF------ 267
           +F PD   F  T  +    +++++R  ++A  L K +K+ L   R   P+ K+F      
Sbjct: 174 TFLPDGEIFETTIFD---YSILQQRFREMA-FLTKGLKIVLRDERPQEPIEKTFHYEGGI 229

Query: 268 AEYVDMYPKSVTRFHERV--------NERWEICVTLSEGQFQQ-VSFVNGIATIKGGTHV 318
            E+V+   +S T  +E++        N   E+ +  ++   +    FVN I T +GGTH+
Sbjct: 230 KEFVEYLNRSTTPLYEQIIYCEGIVNNVSVEVAMQHNDSYNENSYGFVNNITTPEGGTHI 289

Query: 319 DYVANQVANHVMAVVNK----KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
               N +         K    K+   N+   +++  L   ++  I++P F+ QTK+ L  
Sbjct: 290 VGFRNALTKTFNDYARKNKLLKDNEPNLTGEDIREGLTAIISVKIEDPQFEGQTKQKLGN 349

Query: 375 RQSSFGSKCELSEEF---------LKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED 425
            ++       +SE+          + KVT +  ++      A  K     ++        
Sbjct: 350 SEARGAVDNVVSEQLQIFLEQNPQVAKVTVEKSVMAQRAREAARKARDLTRRKSALDGMS 409

Query: 426 VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF--GVFPLRGKLLN 483
           + G  KL D +    +N E+C + + EGDSA      G +   RDR    + PLRGK+LN
Sbjct: 410 LPG--KLADCS---DKNPEKCEIYIVEGDSA-----GGSAKTARDRATQAILPLRGKILN 459

Query: 484 VREASSNQVLNNSEIGNIKKILGLKQGVEYN-NVKSLRYGHLMIMTDQVLLAPLSFLLWF 542
           V +A  +++  N+EI  +  I     G+  + ++  LRY  ++IMTD             
Sbjct: 460 VEKARLDRIYGNAEIKAM--ITAFGTGIHEDFDISKLRYHKIIIMTDA------------ 505

Query: 543 ILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNG 602
                           D DG+HI  LL+ F++ F P L+K     V    P +    +N 
Sbjct: 506 ----------------DVDGAHISTLLLTFMYRFMPDLIK--EGYVYLAQPPLYKLERNK 547

Query: 603 KVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW--- 659
           KV   YS  + ++  + +G + ++  I+ YKGLG   +    E   + T+  +  V    
Sbjct: 548 KVWYAYSDEELDSILQEVGRDNNN-KIQRYKGLGEMDA----EQLWDTTMDPEHRVLLRV 602

Query: 660 -EDDQDGEAIELAFSK---KKIEARKKWL 684
             DD+    ++L F+     K+E R++++
Sbjct: 603 TMDDETASELDLTFTTLMGDKVEPRREFI 631


>gi|383786730|ref|YP_005471299.1| DNA gyrase subunit B [Fervidobacterium pennivorans DSM 9078]
 gi|383109577|gb|AFG35180.1| DNA gyrase, B subunit [Fervidobacterium pennivorans DSM 9078]
          Length = 641

 Score =  139 bits (349), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 166/632 (26%), Positives = 261/632 (41%), Gaps = 110/632 (17%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS  K                        GL+ +  EI+ N+ D   +
Sbjct: 25  LEPVRERPGMYIGSTGK-----------------------TGLHHLVYEIVDNSIDEAIQ 61

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D +KV I  +   + V ++G G+PV+IH E G    E++   L     +     K 
Sbjct: 62  G-YCDKIKVTIKADGS-VEVEDNGRGIPVDIHPETGTSALEVVMTTLHAGGKFSKESYKV 119

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNI--SKCKEGDNW 213
           +GG +G GA + N  S    +E   DG   K Y+Q +     K +E  +     K G   
Sbjct: 120 SGGLHGVGASVVNALSEWMEVEVHRDG---KIYRQRYARGQ-KVTEVEVIGETTKRG--- 172

Query: 214 TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL-----NGHRV-----P 263
           T V FKPD   F     + D +     R+ DLA  L  +V +E      N HR       
Sbjct: 173 TIVRFKPDKTIFTTVEFDSDTIL---TRLRDLA-FLNPNVTIEFIDERNNIHRTLHYSGG 228

Query: 264 VKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQ--------VSFVNGIATIKGG 315
           +K F  Y++   K+    HE V     +     +  FQ         +SFVN I T+ GG
Sbjct: 229 LKEFVSYLNRGEKT---LHEVVYIEGSVQDVQVQVAFQYTDSDTEEIISFVNNIKTVDGG 285

Query: 316 THVDYVANQVANHVMAVVNKKN--KNANVKAHNVKNHLWVFVNAL-IDNPAFDSQTKETL 372
           THV          V  +  KKN  K    +  +++  +   +  L +  P F+ QTK  L
Sbjct: 286 THVTGFKTAFTRVVNELGKKKNMIKGEPFRGEDLREGMTAVIAVLMMGTPQFEGQTKSKL 345

Query: 373 TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKL 432
              +        + ++          +++ ++  A  +Q+++ ++      E V+  S L
Sbjct: 346 GNEEVQDAVAKVVRDKLTDYFEVNESVLKVIIQKA--QQTREAREAAKRAREAVKRKSSL 403

Query: 433 EDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF--GVFPLRGKLLNV 484
             + L G       +N E+  L + EGDSA      G +   RDR    + PLRGK+LNV
Sbjct: 404 GASTLPGKLADCITKNLEESELFIVEGDSA-----GGSAKQARDRNFQAILPLRGKILNV 458

Query: 485 REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
            +++  ++L N +I +I   +G   G  ++  K LRYG ++IMTD               
Sbjct: 459 EKSNELKLLKNEQIRDIITAIGTGTGDNFDESK-LRYGKIIIMTD--------------- 502

Query: 545 IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV 604
                         D DG+HI+ LL+   + +   LL+     V  + P+ K T    K 
Sbjct: 503 -------------ADVDGAHIRTLLLALFYRYMRPLLENGRIYVA-MPPLYKLTVSGEKP 548

Query: 605 LSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
           +  YS  + +A   S+  N   + I+ YKGLG
Sbjct: 549 VYLYSDEELKAKLASI--NGKRYEIQRYKGLG 578


>gi|266620982|ref|ZP_06113917.1| DNA gyrase, B subunit [Clostridium hathewayi DSM 13479]
 gi|288867363|gb|EFC99661.1| DNA gyrase, B subunit [Clostridium hathewayi DSM 13479]
          Length = 636

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 180/687 (26%), Positives = 298/687 (43%), Gaps = 116/687 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS                       + V GL+ +  EI+ NA D +  
Sbjct: 16  LEAVRKRPGMYIGS-----------------------TSVRGLHHLVYEIVDNAVD-EAL 51

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D + V I++++  I+V + G G+PV I ++ G+   E+ F  L     +     K 
Sbjct: 52  AGYCDMIDVTINEDNS-ITVVDDGRGIPVGIQKKAGIPAVEVAFTILHAGGKFGGGGYKV 110

Query: 157 TGGRNGYGAKLTNIFSTEFIIE-TADGKRLKKYKQVFTNNMGKKSEP--NISKCKEGDNW 213
           +GG +G GA + N  S    +E T DG   K YKQ +    GK   P   I +    ++ 
Sbjct: 111 SGGLHGVGASVVNALSNWLEVEITQDG---KTYKQRYEK--GKTMYPLKVIREAGPDEHG 165

Query: 214 TKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDM 273
           TKV+F PD   F  T  + D    +K R+ + A  L K++K+ L  +R   +   E+V  
Sbjct: 166 TKVTFLPDETIFEETVFDYDT---LKIRLRETA-FLTKNLKIVLRDNR---EEKHEHVFH 218

Query: 274 YPKSVTRFHERVN-------ERWEICVTLSEGQFQQV-------------SFVNGIATIK 313
           Y   +  F   +N       ++   C    +G + +V             SFVN I T +
Sbjct: 219 YEGGIKEFVTYLNRGKTPLYDQVFYCEGSKDGVYVEVSMQHNDSYTENIYSFVNNINTPE 278

Query: 314 GGTHVDYVANQVANHV--MAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTK 369
           GGTH+    N + N +   A  NK  K   AN+   +++  L   ++  I+ P F+ QTK
Sbjct: 279 GGTHLSGFKNALTNTLNDYARNNKLLKENEANLSGEDIREGLTAIISVKIEEPQFEGQTK 338

Query: 370 ETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA--------NFKQSKDLKKNDGT 421
           + L   ++       L E+F   +     + +T+   +          ++++DL +   T
Sbjct: 339 QKLGNSEARGAVDNILREQFTYFLEQNPSVAKTICDKSIMAQRARAAARKARDLTRRK-T 397

Query: 422 KTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKL 481
             E +    KL D +    +N E C + + EGDSA   A    S   RD   + PLRGK+
Sbjct: 398 ALEGMALPGKLADCS---DKNPENCEIYIVEGDSAGGSAKTARS---RDTQAILPLRGKI 451

Query: 482 LNVREASSNQVLNNSEIGNIKKILGLKQGVEYN-NVKSLRYGHLMIMTDQVLLAPLSFLL 540
           LNV +A  +++ +N+EI  +  I     G+  + ++  LRY  ++IMTD           
Sbjct: 452 LNVEKARLDRIYSNAEIKAM--ITAFGTGIHEDFDISKLRYNKIIIMTD----------- 498

Query: 541 WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK 600
                             D DG+HI  LL+ F++ F P L+K     V    P +    K
Sbjct: 499 -----------------ADVDGAHISTLLLTFLYRFMPELIKQGH--VYLAQPPLYKVEK 539

Query: 601 NGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE 660
           N KV   YS  +     + +G + ++  I+ YKGLG   +++  E   +        V  
Sbjct: 540 NKKVWYAYSDEELNNILKEIGRDTNN-KIQRYKGLGEMDAEQLWETTMDPERRILLRVAF 598

Query: 661 DDQDGEAIELAFSK---KKIEARKKWL 684
           D++    I+L F+     ++E R++++
Sbjct: 599 DEETASEIDLTFTTLMGDQVEPRREFI 625


>gi|220932011|ref|YP_002508919.1| DNA gyrase subunit B [Halothermothrix orenii H 168]
 gi|219993321|gb|ACL69924.1| DNA gyrase, B subunit [Halothermothrix orenii H 168]
          Length = 637

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 158/632 (25%), Positives = 278/632 (43%), Gaps = 107/632 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS                       + + GL+ +  E++ N+ D +  
Sbjct: 20  LEAVRKRPGMYIGS-----------------------TGIRGLHHLVWEVVDNSID-EYL 55

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D ++V I++++  I+V + G G+P E H E G+   +++   L     +++N  K 
Sbjct: 56  AGYGDKIEVTINEDNS-ITVEDWGRGIPAEEHPETGLPAAQVVMTTLHAGGKFNNNSYKV 114

Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTK 215
           +GG +G G  + N  S    + T  +G    +Y Q +     K     +       N T 
Sbjct: 115 SGGLHGVGISVVNALSEWLELTTYWNGN---EYYQRYERGYPKTKFQKLGTSNR--NGTI 169

Query: 216 VSFKPDLAKFNMTHLEDDVVA--------LMKKRVVDLAGCLGKSVKVELNGHRVPVKSF 267
           +SFKPD   F++T  + + +A        L K+  + L        K E+  +   +K+F
Sbjct: 170 ISFKPDPEIFDVTEFKYETLAHRLQESAFLNKELSLILIDKRSDKTKKEVFQYDGGIKAF 229

Query: 268 AEYVDMYPKSVTR---FHERVNERWEICVTL--SEGQFQQV-SFVNGIATIKGGTHVDYV 321
            EY++   + +     + E+ N  + I V L  +EG  +++ S+ N I T+ GG H+   
Sbjct: 230 VEYLNKNRQVINEDIIYTEKENGDYYIEVALQYNEGYNERIFSYANNINTVDGGYHLTGF 289

Query: 322 ANQVANHVMAVVNKKN----KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETL----- 372
              +   +     + N     +  +  ++V+  L   VN  + NP F+ QTK  L     
Sbjct: 290 KTALTKAINNFAKQNNLLKQSDPTLTGNDVREGLTAVVNVKLPNPQFEGQTKSKLGNSEI 349

Query: 373 -TLRQSSFGSKCEL----SEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDV 426
            ++ +S+      L    + E  KK+  K+  ++ + +    K++++L ++ +   +  +
Sbjct: 350 RSIVESNIYDYLSLYLDSNPEVGKKIVDKA--IQAIRARQASKKARELTRRKNALNSHSL 407

Query: 427 RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF--GVFPLRGKLLNV 484
            G  KL D      R  E+  L L EGDSA      G +  GR+R    + PL+GK++NV
Sbjct: 408 PG--KLADC---ASRKPEKSELFLVEGDSA-----GGSAKQGRNRHFQAILPLKGKIMNV 457

Query: 485 REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
             A  +++L+N+EI  I   LG   G E+N +  LRY  ++IMTD               
Sbjct: 458 ERARLDKILSNNEIATIISALGTGIGQEFN-IDKLRYHKIIIMTDA-------------- 502

Query: 545 IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV 604
                         D DG+HI  LL+   + + P L+K   ++     P+ K + K   +
Sbjct: 503 --------------DVDGAHIATLLLTLFYRYMPELIK-EGYIYIAQPPLYKVSWKK-NI 546

Query: 605 LSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
              Y+  + E+ K  L     S+SI+ YKGLG
Sbjct: 547 RYLYTDKELESLKREL--ENKSYSIQRYKGLG 576


>gi|363896924|ref|ZP_09323472.1| DNA gyrase, B subunit [Oribacterium sp. ACB7]
 gi|361960112|gb|EHL13370.1| DNA gyrase, B subunit [Oribacterium sp. ACB7]
          Length = 652

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 159/637 (24%), Positives = 279/637 (43%), Gaps = 103/637 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE +  RP  YIGS                       + V GL+ +  EI+ N+ D +  
Sbjct: 31  LEAVRKRPGMYIGS-----------------------TSVRGLHHLVYEIVDNSVD-EAL 66

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D + V I +++  I+V + G G+PV+I ++ G    E++F  L     +  +  K 
Sbjct: 67  AGFCDNITVTIHKDNS-ITVEDDGRGIPVDIQKKAGKSALEVVFTVLHAGGKFGGSGYKV 125

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKV 216
           +GG +G GA + N  S+   ++    K  K Y   F+     K    I  C E ++ TKV
Sbjct: 126 SGGLHGVGASVVNALSS--FLDVTVCKDGKIYTMSFSKGKVIKEIECIGTCTEEEHGTKV 183

Query: 217 SFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNG------------HRVPV 264
            F PD   F  +  + D    +K R+ + A  L K+++++L              +   +
Sbjct: 184 HFLPDSEIFEESIYDFDT---LKVRLRETA-FLTKNLRIKLVDEREEETREMTFHYEGGI 239

Query: 265 KSFAEYVD-----MYPKSVTRFHERVNERWEICVTLSEGQFQQV-SFVNGIATIKGGTHV 318
           K F  Y++     +YP  +    E+ +   E+ +  ++   + + +FVN I T +GGTH+
Sbjct: 240 KEFVTYLNKGKEALYPDVIYCEGEKEHILVEVAMQHNDSYTENIYTFVNNINTPEGGTHL 299

Query: 319 DYVANQVANHV--MAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTL 374
               N +       A  NK  K+   N+   +++  L   ++  I++P F+ QTK+ L  
Sbjct: 300 TGFKNALTKTFNDYARQNKLLKDSEPNLSGEDIREGLTCIISVKIEDPQFEGQTKQKLGT 359

Query: 375 RQSSFGSKCELSEE---FLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
            ++    +  +SE+   FL++  A + ++      A   ++   K  D T+ +     S 
Sbjct: 360 SEAQVAVQGIVSEQLTYFLEQNPAVARVMCEKSIMAQRARAAARKARDLTRRK-----SA 414

Query: 432 LEDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
           L+   L G       +++E+C + + EGDSA   A  G +    +   V PLRGK+LNV+
Sbjct: 415 LDGVGLPGKLADCSSKDAERCEIFIVEGDSALGPAKEGRN---PETQAVLPLRGKVLNVQ 471

Query: 486 EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
           +A  +++  N EI  +    G     +++ +  LRY  ++IMTD                
Sbjct: 472 KARLDRIYANEEIKGMITAFGTGINEDFD-LSKLRYHKIIIMTDA--------------- 515

Query: 546 FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL 605
                        D DG+HI  L++ FI++F P L+K     V    P +    KN K  
Sbjct: 516 -------------DVDGAHISTLMLTFIYNFMPDLIKEGH--VYLAQPPLFNITKNKKHY 560

Query: 606 SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKE 642
             YS  +Y+   + +G  A    +  +KGLG   ++E
Sbjct: 561 YAYSDEEYQNILKEIG--AEGADVSRFKGLGEMDTEE 595


>gi|321454506|gb|EFX65673.1| hypothetical protein DAPPUDRAFT_332921 [Daphnia pulex]
          Length = 227

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/193 (40%), Positives = 105/193 (54%), Gaps = 10/193 (5%)

Query: 138 LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
           +IF  LL   N+ D  +  TGG N YGAKL NIFST F +ETA      ++KQ +T+NM 
Sbjct: 1   MIFDPLLPDFNFYDGEETVTGGLNYYGAKLGNIFSTAFELETASKDLCLRFKQTWTDNMT 60

Query: 198 KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL 257
               P +     G N+TK +F PDL KF M  L  D +AL+ +R  ++A      V V L
Sbjct: 61  LAETPVVEP-YSGPNYTKNTFSPDLDKFRMDSLNKDTIALLSRRAFEVATS-TPGVNVYL 118

Query: 258 NGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGI 309
           N   +P+ +F EY+D+  K         +    E VNERW+I V +SE   QQ+S  N  
Sbjct: 119 NDKPLPINNFKEYLDLCLKGKVDCLGAQLKCVFEAVNERWDIAVAVSEHGLQQISLANKC 178

Query: 310 ATIKGGTHVDYVA 322
            T KGG HVDY+ 
Sbjct: 179 CTTKGGRHVDYIT 191


>gi|311993263|ref|YP_004010129.1| gp52 topoisomerase II, medium subunit [Enterobacteria phage CC31]
 gi|284178101|gb|ADB81767.1| gp52 topoisomerase II, medium subunit [Enterobacteria phage CC31]
          Length = 460

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 236/487 (48%), Gaps = 76/487 (15%)

Query: 708  KELILFSMADLQRSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEHSAY 764
            KE  ++++ +  R+IP+++DG KP QR ++  +    + N  K  K+A  +G V++   Y
Sbjct: 33   KEFAIYTVEN--RAIPNLIDGFKPVQRFVIARALDLSRGNKEKFHKLASVAGGVAD-LGY 89

Query: 765  HHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFL 824
            HHGE S       MA  +  +NN  LL   G FG+R    + AA++RYIF R+S   R +
Sbjct: 90   HHGEGSAQDAGALMANTW--NNNYPLLDGQGNFGSRLV--QKAAASRYIFCRISDNFRKV 145

Query: 825  FPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVR 884
            + KD +   ++  +D + + P +Y+PIIPTVL+NG +GI TG+++ I  ++   +V   +
Sbjct: 146  Y-KDTEIAPEH--KDKEHVPPAFYLPIIPTVLLNGVQGIATGYATKILPHSFESVVECTK 202

Query: 885  RLLNGEM-MEP--MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
              L G++  EP    P +RG      +    E G +    G+ +  + + + I E+P + 
Sbjct: 203  LALQGKLDKEPEVQIPQFRG------EVVRLEDG-SIECRGLYKFTSASQMYISEIPAKF 255

Query: 942  WTQDYRE-FLESIIDQNDSFIRGFRQYSDD---TTVDFEVFLSEESMM-----RTKQEGL 992
              + Y E  LE ++D+N      F  Y DD   T   F+V   ++ M+     + + E +
Sbjct: 256  DRETYVEKVLEPMVDKN------FISYVDDCSKTGFGFKVKFKKDYMLGECDEKYRHEKI 309

Query: 993  LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
            ++ FKL   +S   + + ++  +  K+ +  ++++ F  +R  +  KR + +++  + E 
Sbjct: 310  MRDFKLVEKMSQFIVVIDENGKLNDKFQSSSELIKHFVEVRKTYIVKRIEHKIKECD-EA 368

Query: 1053 LKLE-NKVRFILGVVNGEIVVNNRKRTDLLLELRQK-GFTPFPKNSKSIEAVVAGATDET 1110
             KL   K  FI  V+ G IV+  + R  L  EL  +  + PF                  
Sbjct: 369  FKLALAKAMFIKEVIEGSIVIQGKTRKQLTSELESRPTYAPFA----------------- 411

Query: 1111 EESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLW 1170
                              D L+SM I  +T ++ + L      L  E+   ++ TPE+ +
Sbjct: 412  ------------------DKLVSMNIYHITSDEAKKLAQQAKDLKAELKYWQETTPETEY 453

Query: 1171 VKDLDAL 1177
            +KDL+AL
Sbjct: 454  MKDLEAL 460


>gi|334144727|ref|YP_004537883.1| DNA gyrase subunit B [Thioalkalimicrobium cyclicum ALM1]
 gi|333965638|gb|AEG32404.1| DNA gyrase, B subunit [Thioalkalimicrobium cyclicum ALM1]
          Length = 811

 Score =  138 bits (348), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 234/536 (43%), Gaps = 79/536 (14%)

Query: 78  GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
           GL+ +  E++ NA D        D +KV I  +   +SV ++G G+PV+IH+ EGV   E
Sbjct: 41  GLHHMVFEVVDNAIDEALAG-HCDTIKVTIHTDGS-VSVTDNGRGIPVDIHEGEGVSAAE 98

Query: 138 LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
           +I   L     +DDN  K +GG +G G  + N  S E  +     +  K +KQ +  ++G
Sbjct: 99  VIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEELNLTIH--RHGKIWKQTY--HLG 154

Query: 198 KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL 257
               P  +        T++ FKP    F +T    D    + KR+ +L+  L   V +EL
Sbjct: 155 VPQAPLAAMGDSDKTGTEIRFKPSSEIFTITEYNFD---YLLKRLRELS-FLNSGVHIEL 210

Query: 258 NGHRVPVKSFAEY-------VDMY-----PKSVTRFH-ERVNERWEICVTLSEGQFQQ-- 302
              R   K   +Y       VD       P +   FH   V +   + V +   +  Q  
Sbjct: 211 IDKRDDRKQVFQYEGGILAFVDFINHNKTPINAKAFHFSTVKDDITVEVAMQWSESYQES 270

Query: 303 -VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKN----ANVKAHNVKNHLWVFVNA 357
            V F N I    GGTH+      +   + + + K+  N     NV   + +  L   ++ 
Sbjct: 271 IVCFTNNIPQHDGGTHLSGFRAALTRTLNSYIEKEGLNKKFKINVSGDDAREGLAAVISV 330

Query: 358 LIDNPAFDSQTKETLTLRQSSFGSKCELSE---EFL-------KKVTAKSGIVETLLSWA 407
            + +P F SQTK+ L   +     +  ++E   E+L       K V AK  IV+   +  
Sbjct: 331 KVPDPKFSSQTKDKLVSSEVKSAVETAMNEKLAEYLLENPNEAKAVFAK--IVDAARARE 388

Query: 408 NFKQSKDLKKNDGTKTEDVRGI-SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSV 466
             ++++++ +  G    D+ G+  KL D        SE   L L EGDSA   A  G   
Sbjct: 389 AARKAREMTRRKGAL--DIAGLPGKLADCQEKDPALSE---LYLVEGDSAGGSAKQGRD- 442

Query: 467 VGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMI 526
             R R  + PL+GK+LNV  A  +++++++E+G +   LG   G +  N++ LRY  ++I
Sbjct: 443 --RRRQAILPLKGKILNVERARFDKMISSAEVGTLITALGCGIGPDEYNLEKLRYHRIII 500

Query: 527 MTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK 582
           MTD                             D DGSHI+ LL+ F +   P L++
Sbjct: 501 MTD----------------------------ADVDGSHIRTLLLTFFYRQLPDLIE 528


>gi|9632631|ref|NP_049621.1| gp39 topoisomerase II, large subunit, N-terminal region
           [Enterobacteria phage T4]
 gi|1351264|sp|P09176.2|TOPL_BPT4 RecName: Full=DNA topoisomerase large subunit; AltName:
           Full=Protein Gp39
 gi|5354255|gb|AAD42462.1|AF158101_49 gp39 topoisomerase II, large subunit, N-terminal region
           [Enterobacteria phage T4]
 gi|728617|emb|CAA29569.1| DNA topoisomerase large subunit [Enterobacteria phage T4]
          Length = 516

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 220/488 (45%), Gaps = 39/488 (7%)

Query: 35  SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
           S +EHI  R   YIGS    T   +++ +        ++ YVPGL K+ DEI+ N+ D  
Sbjct: 10  SDIEHIKKRSGMYIGSSANETHERFMFGK------WESVQYVPGLVKLIDEIIDNSVDEG 63

Query: 95  QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLL--TSSNYDD 151
            R     A K+ +  +++ ++V ++G G+P   +    G  +P  +    +     N+ D
Sbjct: 64  IRTKFKFANKINVTIKNNQVTVEDNGRGIPQAMVKTPTGEEIPGPVAAWTIPKAGGNFGD 123

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
           + ++ TGG NG G+ LTNIFS  F+ ET DG+     +   +N M  KS  +I    +G 
Sbjct: 124 DKERVTGGMNGVGSSLTNIFSVMFVGETGDGQNNIVVR--CSNGMENKSWEDIPGKWKG- 180

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
             T+V+F PD   F    L    + +   R+  LA  +   ++   NG +V   +F +Y 
Sbjct: 181 --TRVTFIPDFMSFETNELSQVYLDITLDRLQTLA-VVYPDIQFTFNGKKVQ-GNFKKYA 236

Query: 272 DMYPKSVTRFHERVNER--WEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHV 329
             Y +     H  V E+    I V  S   F+Q+++VN I T  GG H+D   + +   +
Sbjct: 237 RQYDE-----HAIVQEQENCSIAVGRSPDGFRQLTYVNNIHTKNGGHHIDCAMDDICEDL 291

Query: 330 MAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCEL-- 385
           +  + +K K  +V    VK  L +  FV  +  N     QTKE LT       S  +L  
Sbjct: 292 IPQIKRKFK-IDVTKARVKECLTIVMFVRDM-KNMRLIRQTKERLTSPFGEIRSHIQLDA 349

Query: 386 ---SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
              S + L        I+E  L  A    ++   +    K      + K   ANL G   
Sbjct: 350 KKISRDILNNEAILMPIIEAAL--ARKLAAEKAAETKAAKKASKAKVHKHIKANLCG--K 405

Query: 443 SEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIK 502
               TL LTEGDSA       + V  ++  G +PLRGK+LN    S   +L N E+ +I 
Sbjct: 406 DADTTLFLTEGDSAIGYL---IDVRDKELHGGYPLRGKVLNSWGMSYADMLKNKELFDIC 462

Query: 503 KILGLKQG 510
            I GL  G
Sbjct: 463 AITGLVLG 470


>gi|228861574|ref|YP_002854595.1| gp52 DNA topoisomerase subunit [Enterobacteria phage RB14]
 gi|227438590|gb|ACP30903.1| gp52 DNA topoisomerase subunit [Enterobacteria phage RB14]
          Length = 442

 Score =  138 bits (347), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 197/390 (50%), Gaps = 30/390 (7%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            ++ E + ++M  ++ R+IP+M+DG KP QR ++  +    + N  K  K+A  +G V++ 
Sbjct: 12   IDNEALAYAMYTVENRAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD- 70

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
              YHHGE S       MA  +  +NN  LL   G FG+R    + AA++RYIF R+S   
Sbjct: 71   LGYHHGENSAQDAGALMANTW--NNNFPLLDGQGNFGSRTV--QKAAASRYIFARVS--- 123

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            +  +    D     +++D + I P +Y+PIIPTVL+NG  GI TG+++YI  ++   +  
Sbjct: 124  KNFYNVYKDTEYAPVHQDKEHIPPAFYLPIIPTVLLNGVSGIATGYATYILPHSVSSVKK 183

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
             V + L G+ +      +  F G + +   +     Y + G  +  + T + I E+P   
Sbjct: 184  AVLQALQGKKVTKPKVEFPEFRGEVVEIDGQ-----YEIRGTYKFTSRTQMHITEIP--- 235

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSD---DTTVDFEV-FLSEESMMRTKQE---GLLK 994
            +  D   ++  I+D  +   +GF  + D   +    F+V F  E S+   ++E    ++K
Sbjct: 236  YKYDRETYVSKILDPLED--KGFITWDDACGEHGFGFKVKFRKEYSLCDNEEERHAKIMK 293

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             F L    S  N+ + + KG ++ YD    ++++F  +R  + +KR   +++  E     
Sbjct: 294  DFGLIERRS-QNITVINEKGKLQVYDNVVDLIKDFVEVRKTYVQKRIDNKIKETESAFRL 352

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
               K  FI  V++GEIVV  + R +L  EL
Sbjct: 353  AFAKAHFIKKVISGEIVVQGKTRKELTEEL 382


>gi|435844548|ref|YP_007006652.1| gp45 [Sphingomonas phage PAU]
 gi|380885858|gb|AFF28043.1| gp45 [Sphingomonas phage PAU]
          Length = 496

 Score =  138 bits (347), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 189/393 (48%), Gaps = 18/393 (4%)

Query: 703  SDFVNKELILFS-MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIK--EAKVAQFSGYVS 759
            +D++  + + ++  A  +R++PS++DG K G RKIL  +   +  K  + K     G V 
Sbjct: 31   TDYMQTKYLTYAKYAVAKRAVPSLIDGFKTGARKILHAALNGSAKKGSDVKCLNLVGDVY 90

Query: 760  EHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASA-RYIFTRLS 818
              S Y HG+ SL ST+L ++ DF  S+N+  L   GQ GT      DAA+A RY++ RLS
Sbjct: 91   SLSGYDHGDSSLYSTMLTLSSDF--SDNLAPLFIKGQGGTLRD--PDAAAAPRYLYIRLS 146

Query: 819  PITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRD 878
              T  L+  D D +L +   +G+  EP +Y+PIIPTVL + + GIG G++    +YNP D
Sbjct: 147  KYTNLLYKTDYD-ILKFDVSEGETHEPQFYLPIIPTVLTSNTSGIGVGYAFSSMSYNPLD 205

Query: 879  IVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKE---AGVTYTVTGIIEEVNETTLRIK 935
            ++  +R  L    +  + P+ +G         + +       Y +    +   +  + + 
Sbjct: 206  LIEAIRNYLAYGYITSVRPYVKGLTENARWFFTDDRWHCQGHYEIVRATKRGEKNKIVVN 265

Query: 936  ELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGL--- 992
            EL   +   +     ++++D     I  +   S  + + +E++   +         +   
Sbjct: 266  ELTFDKTFLNIESHYDTLVDS--GIIEDWVNNSRGSKIKYELYFKTDEQFEKAISDVWNL 323

Query: 993  -LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
             L   K  + +   N+ + D    I+ ++ PE ++E F   RL  Y  RK    + +   
Sbjct: 324  ELNILKNISKVEKDNLTVMDENDKIRYFEKPEALIEYFTKFRLGKYNDRKDAMTKKINER 383

Query: 1052 LLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
            + ++   ++FI  V++ +IV++NR   D+  +L
Sbjct: 384  IERINMLLKFIQLVIDSKIVLSNRSIKDVKADL 416


>gi|325922762|ref|ZP_08184496.1| DNA gyrase subunit B [Xanthomonas gardneri ATCC 19865]
 gi|325546758|gb|EGD17878.1| DNA gyrase subunit B [Xanthomonas gardneri ATCC 19865]
          Length = 814

 Score =  138 bits (347), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 162/643 (25%), Positives = 271/643 (42%), Gaps = 118/643 (18%)

Query: 20  PTAPNKTIEEM-YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPG 78
           PT PN T +         LE +  RP  YIG +   T                      G
Sbjct: 8   PTTPNSTYDSSKITVLRGLEAVRKRPGMYIGDVHDGT----------------------G 45

Query: 79  LYKIFDEILVNAADNKQRDPKMD-AVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
           L+ +  E++ N+ D        D  VK+++D     ++V ++G GVPV+IH+EEGV   E
Sbjct: 46  LHHMVFEVVDNSVDEALAGHADDIVVKILVDGS---VAVSDNGRGVPVDIHKEEGVSAAE 102

Query: 138 LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET-ADGKRLKKYKQVFTNNM 196
           +I   L     +DDN  K +GG +G G  + N  S    ++   DG     Y+Q +   +
Sbjct: 103 VILTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEHLWLDIWRDGFH---YQQEYA--L 157

Query: 197 GKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVE 256
           G+   P           T + FKP +A F+      D++A   +R+ +L+  L   VK+ 
Sbjct: 158 GEPQYPLKQLEASTKRGTTLRFKPAVAIFSDVEFHYDILA---RRLRELS-FLNSGVKIA 213

Query: 257 LNGHRVP-----------VKSFAEYV-----DMYPKSVTRFHERVNERWEICVTLSEG-Q 299
           L   R             ++SF E++      ++P  ++   E      ++ +  ++  Q
Sbjct: 214 LIDERGEGRRDDFHYEGGIRSFVEHLAQLKSPLHPNVISVTGEHNGIVVDVALQWTDAYQ 273

Query: 300 FQQVSFVNGIATIKGGTHVD----YVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFV 355
                F N I    GGTH+      +   ++N++      K     +   +++  +   +
Sbjct: 274 ETMYCFTNNIPQKDGGTHLAGFRAALTRVLSNYIEQNGIAKQAKVALTGDDMREGMIAVL 333

Query: 356 NALIDNPAFDSQTKETLTLR------QSSFGSKCELSEEFL-------KKVTAKSGIVET 402
           +  + +P+F SQTKE L         +++FG++ +   EFL       K +T K  IV+ 
Sbjct: 334 SVKVPDPSFSSQTKEKLVSSDVRPAVENAFGARLQ---EFLQENPNEAKAITGK--IVDA 388

Query: 403 LLSWANFKQSKDLKKNDGTKTEDVRGI-SKLEDANLAGGRNSEQCTLILTEGDSAKALAM 461
             +    ++++DL +  G    D+ G+  KL D      ++     L + EGDSA   A 
Sbjct: 389 ARAREAARKARDLTRRKGAL--DIAGLPGKLADCQ---EKDPALSELFIVEGDSAGGSAK 443

Query: 462 AGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRY 521
            G +   R    V PLRGK+LNV  A  +++L + ++G +   LG   G +  N   LRY
Sbjct: 444 QGRN---RKNQAVLPLRGKILNVERARFDRMLASDQVGTLITALGTGIGRDEYNPDKLRY 500

Query: 522 GHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLL 581
             +++MTD                             D DGSHI+ LL+ F +   P L+
Sbjct: 501 HRIILMTDA----------------------------DVDGSHIRTLLLTFFYRQMPELI 532

Query: 582 KIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNA 624
           +   ++   + P+ K   K GK  S   + D  A    L  NA
Sbjct: 533 E-RGYIYIGLPPLYKL--KQGK--SELYLKDDAALNAYLASNA 570


>gi|9632656|ref|NP_049875.1| gp52 topoisomerase II, medium subunit [Enterobacteria phage T4]
 gi|1351263|sp|P07065.2|TOP5_BPT4 RecName: Full=DNA topoisomerase medium subunit; AltName: Full=Protein
            Gp52
 gi|5354280|gb|AAD42487.1|AF158101_74 gp52 topoisomerase II, medium subunit [Enterobacteria phage T4]
 gi|728620|emb|CAA27959.1| 52-protein [Enterobacteria phage T4]
 gi|299780622|gb|ADJ39984.1| DNA topoisomerase II medium subunit [Enterobacteria phage T4T]
          Length = 442

 Score =  138 bits (347), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 198/390 (50%), Gaps = 30/390 (7%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            ++ E + ++M  ++ R+IP+M+DG KP QR ++  +    + N  K  K+A  +G V++ 
Sbjct: 12   IDNEALAYAMYTVENRAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD- 70

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
              YHHGE S       MA  +  +NN  LL   G FG+R    + AA++RYIF R+S   
Sbjct: 71   LGYHHGENSAQDAGALMANTW--NNNFPLLDGQGNFGSRTV--QKAAASRYIFARVS--- 123

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            +  +    D     +++D + I P +Y+PIIPTVL+NG  GI TG+++YI  ++   +  
Sbjct: 124  KNFYNVYKDTEYAPVHQDKEHIPPAFYLPIIPTVLLNGVSGIATGYATYILPHSVSSVKK 183

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
             V + L G+ +      +  F G + +   +     Y + G  +  + T + I E+P   
Sbjct: 184  AVLQALQGKKVTKPKVEFPEFRGEVVEIDGQ-----YEIRGTYKFTSRTQMHITEIP--- 235

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSD---DTTVDFEV-FLSEESMMRTKQE---GLLK 994
            +  D   ++  I+D  ++  +GF  + D   +    F+V F  E S+   ++E    ++K
Sbjct: 236  YKYDRETYVSKILDPLEN--KGFITWDDACGEHGFGFKVKFRKEYSLSDNEEERHAKIMK 293

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             F L    S  N+ + + KG ++ YD    ++++F  +R  + +KR   +++  E     
Sbjct: 294  DFGLIERRS-QNITVINEKGKLQVYDNVVDLIKDFVEVRKTYVQKRIDNKIKETESAFRL 352

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
               K  FI  V++GEIVV  + R +L  EL
Sbjct: 353  AFAKAHFIKKVISGEIVVQGKTRKELTEEL 382


>gi|330858778|ref|YP_004415153.1| putative DNA topoisomerase subunit [Shigella phage Shfl2]
 gi|422934675|ref|YP_007004636.1| phage-associated DNA topoisomerase [Enterobacteria phage ime09]
 gi|327397712|gb|AEA73214.1| putative DNA topoisomerase subunit [Shigella phage Shfl2]
 gi|339791458|gb|AEK12515.1| phage-associated DNA topoisomerase [Enterobacteria phage ime09]
          Length = 442

 Score =  137 bits (346), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 197/390 (50%), Gaps = 30/390 (7%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            ++ E + ++M  ++ R+IP+M+DG KP QR ++  +    + N  K  K+A  +G V++ 
Sbjct: 12   IDNEALAYAMYTVENRAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD- 70

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
              YHHGE S       MA  +  +NN  LL   G FG+R    + AA++RYIF R+S   
Sbjct: 71   LGYHHGENSAQDAGALMANTW--NNNFPLLDGQGNFGSRTV--QKAAASRYIFARVS--- 123

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            +  +    D     +++D + I P +Y+PIIPTVL+NG  GI TG+++YI  ++   +  
Sbjct: 124  KNFYSVYKDTEYAPVHQDKEHIPPAFYLPIIPTVLLNGVSGIATGYATYILPHSVSSVKK 183

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
             V + L G+ +      +  F G + +   +     Y + G  +  + T + I E+P   
Sbjct: 184  AVLQALQGKKVTKPKVEFPEFRGEVVEIDGQ-----YEIRGTYKFTSRTQMNITEIP--- 235

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSD---DTTVDFEV-FLSEESMMRTKQE---GLLK 994
            +  D   ++  I+D  +   +GF  + D   +    F+V F  E S+   ++E    ++K
Sbjct: 236  YKYDRETYVSKILDPLED--KGFITWDDACGEHGFGFKVKFRKEYSLSDNEEERHAKIMK 293

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             F L    S  N+ + + KG ++ YD    ++++F  +R  + +KR   +++  E     
Sbjct: 294  DFGLIERRS-QNITVINEKGKLQVYDNVVDLIKDFVEVRKTYVQKRIDNKIKETESAFRL 352

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
               K  FI  V++GEIVV  + R +L  EL
Sbjct: 353  AFAKAHFIKKVISGEIVVQGKTRKELTEEL 382


>gi|116326478|ref|YP_803198.1| DNA topoisomerase subunit [Enterobacteria phage RB32]
 gi|115344071|gb|ABI95080.1| DNA topoisomerase subunit [Enterobacteria phage RB32]
          Length = 442

 Score =  137 bits (346), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 195/390 (50%), Gaps = 30/390 (7%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            ++ E + ++M  ++ R+IP+M+DG KP QR ++  +    + N  K  K+A  +G V++ 
Sbjct: 12   IDNEALAYAMYTVENRAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD- 70

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
              YHHGE S       MA  +  +NN  LL   G FG+R    + AA++RYIF R+S   
Sbjct: 71   LGYHHGENSAQDAGALMANTW--NNNFPLLDGQGNFGSRTV--QKAAASRYIFARVS--- 123

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            +  +    D     +++D + I P +Y+PIIPTVL+NG  GI TG+++YI  ++   +  
Sbjct: 124  KNFYNVYKDTEYAPVHQDKEHIPPAFYLPIIPTVLLNGVSGIATGYATYILPHSVSSVKK 183

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
             V + L G+ +      +  F G + +   +     Y + G  +  + T + I E+P   
Sbjct: 184  AVLQALQGKKVTKPKVEFPEFRGEVVEIDGQ-----YEIRGTYKFTSRTQMHITEIP--- 235

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSD---DTTVDFEVFLSEESMMRTKQE----GLLK 994
            +  D   ++  I+D  +   +GF  + D   +    F+V   +E  +   +E     ++K
Sbjct: 236  YKYDRETYVSKILDPLED--KGFITWDDACGEHGFGFKVKFRKEYFLSDNEEERHAKIMK 293

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             F L    S  N+ + + KG ++ YD    ++++F  +R  + +KR   +++  E     
Sbjct: 294  DFGLIERRS-QNITVINEKGKLQVYDNVVDLIKDFVEVRKTYVQKRIDNKIKETESAFRL 352

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
               K  FI  V++GEIVV  + R +L  EL
Sbjct: 353  AFAKAHFIKKVISGEIVVQGKTRKELTEEL 382


>gi|395650524|ref|ZP_10438374.1| DNA gyrase subunit B [Pseudomonas extremaustralis 14-3 substr.
           14-3b]
          Length = 805

 Score =  137 bits (346), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 238/533 (44%), Gaps = 73/533 (13%)

Query: 78  GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
           GL+ +  E++ N+ D +      D + ++I  +   I+V ++G G+PV++H+EEGV   E
Sbjct: 37  GLHHMVFEVVDNSID-EALAGHCDDISIIIHPDES-ITVRDNGRGIPVDVHKEEGVSAAE 94

Query: 138 LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
           +I   L     +DDN  K +GG +G G  + N  S E I+      ++  ++Q + +  G
Sbjct: 95  VIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEELILTVRRSGKI--WEQTYVH--G 150

Query: 198 KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLG------K 251
              EP       G   T++ FKP    F   H   D++A   + +  L   +G      +
Sbjct: 151 VPQEPMKIVGDSGSTGTQIHFKPSAETFKNIHFSWDILAKRIRELSFLNSGVGIVLKDER 210

Query: 252 SVKVELNGHRVPVKSFAEYVDMYPKSVTR-FHERVNERWEICVTLS---EGQFQQ--VSF 305
           S K EL  +   +++F EY++     V + FH  V     I V ++      F +  + F
Sbjct: 211 SGKEELFKYEGGLRAFVEYLNTNKTPVNQVFHFNVQREDGIGVEIALQWNDSFNENLLCF 270

Query: 306 VNGIATIKGGTHVDYVANQVANHVMAVVN-----KKNKNANVKAHNVKNHLWVFVNALID 360
            N I    GGTH+    + +  ++   +      KK+K A     + +  L   ++  + 
Sbjct: 271 TNNIPQRDGGTHLVGFRSALTRNLNTYIEAEGLAKKHKVATT-GDDAREGLTAIISVKVP 329

Query: 361 NPAFDSQTKETLTLRQSSFGSKCELSEEF----------LKKVTAKSGIVETLLSWANFK 410
           +P F SQTK+ L   +     + E+ + F           K V  K  +++   +    +
Sbjct: 330 DPKFSSQTKDKLVSSEVKTAVEQEMGKYFSDFLLENPNEAKLVVGK--MIDAARAREAAR 387

Query: 411 QSKDLKKNDGTKTEDVRGI-SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGR 469
           +++++ +  G    D+ G+  KL D        SE   L L EGDSA   A  G +   R
Sbjct: 388 KAREMTRRKGAL--DIAGLPGKLADCQEKDPALSE---LYLVEGDSAGGSAKQGRN---R 439

Query: 470 DRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTD 529
               + PL+GK+LNV +A  ++++++ E+G +   LG   G +  N++ LRY +++IMTD
Sbjct: 440 RTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGRDEYNIEKLRYHNIIIMTD 499

Query: 530 QVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK 582
                                        D DGSHI+ LL+ F     P L++
Sbjct: 500 ----------------------------ADVDGSHIRTLLLTFFFRQLPELIE 524


>gi|228861192|ref|YP_002854215.1| gp52 DNA topoisomerase subunit [Enterobacteria phage RB51]
 gi|227438866|gb|ACP31178.1| gp52 DNA topoisomerase subunit [Enterobacteria phage RB51]
          Length = 442

 Score =  137 bits (346), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 197/390 (50%), Gaps = 30/390 (7%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            ++ E + ++M  ++ R+IP+M+DG KP QR ++  +    + N  K  K+A  +G V++ 
Sbjct: 12   IDNEALAYAMYTVENRAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD- 70

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
              YHHGE S       MA  +  +NN  LL   G FG+R    + AA++RYIF R+S   
Sbjct: 71   LGYHHGENSAQDAGALMANTW--NNNFPLLDGQGNFGSRTV--QKAAASRYIFARVS--- 123

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            +  +    D     +++D + I P +Y+PIIPTVL+NG  GI TG+++YI  ++   +  
Sbjct: 124  KNFYNVYKDTEYAPVHQDKEHIPPAFYLPIIPTVLLNGVSGIATGYATYILPHSVSSVKK 183

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
             V + L G+ +      +  F G + +   +     Y + G  +  + T + I E+P   
Sbjct: 184  AVLQALQGKKVTKPKVEFPEFRGEVVEIDGQ-----YEIRGTYKFTSRTQMHITEIP--- 235

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSD---DTTVDFEV-FLSEESMMRTKQE---GLLK 994
            +  D   ++  I+D  +   +GF  + D   +    F+V F  E S+   ++E    ++K
Sbjct: 236  YKYDRETYVSKILDPLED--KGFITWDDACGEHGFGFKVKFRKEYSLSDNEEERHAKIMK 293

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             F L    S  N+ + + KG ++ YD    ++++F  +R  + +KR   +++  E     
Sbjct: 294  DFGLIERRS-QNITVINEKGKLQVYDNVVDLIKDFVEVRKTYVQKRIDNKIKETESAFRL 352

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
               K  FI  V++GEIVV  + R +L  EL
Sbjct: 353  AFAKAHFIKKVISGEIVVQGKTRKELTEEL 382


>gi|422935042|ref|YP_007005002.1| topoisomerase II medium subunit [Escherichia phage wV7]
 gi|343177596|gb|AEM00922.1| topoisomerase II medium subunit [Escherichia phage wV7]
          Length = 442

 Score =  137 bits (346), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 197/390 (50%), Gaps = 30/390 (7%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            ++ E + ++M  ++ R+IP+M+DG KP QR ++  +    + N  K  K+A  +G V++ 
Sbjct: 12   IDNEALAYAMYTVENRAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD- 70

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
              YHHGE S       MA  +  +NN  LL   G FG+R    + AA++RYIF R+S   
Sbjct: 71   LGYHHGENSAQDAGALMANTW--NNNFPLLDGQGNFGSRTV--QKAAASRYIFARVS--- 123

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            +  +    D     +++D + I P +Y+PIIPTVL+NG  GI TG+++YI  ++   +  
Sbjct: 124  KNFYNVYKDTEYAPVHQDKEHIPPAFYLPIIPTVLLNGVSGIATGYATYILPHSVSSVKK 183

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
             V + L G+ +      +  F G + +   +     Y + G  +  + T + I E+P   
Sbjct: 184  AVLQALQGKKVTKPKVEFPEFRGEVVEIDGQ-----YEIRGTYKFTSRTQMHITEIP--- 235

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSD---DTTVDFEV-FLSEESMMRTKQE---GLLK 994
            +  D   ++  I+D  +   +GF  + D   +    F+V F  E S+   ++E    ++K
Sbjct: 236  YKYDRETYVSKILDPLED--KGFITWDDACGEHGFGFKVKFRKEYSLSDNEEERHAKIMK 293

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             F L    S  N+ + + KG ++ YD    ++++F  +R  + +KR   +++  E     
Sbjct: 294  DFGLIERRS-QNITVINEKGKLQVYDNVVDLIKDFVEVRKTYVQKRIDNKIKETESAFRL 352

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
               K  FI  V++GEIVV  + R +L  EL
Sbjct: 353  AFAKAHFIKKVISGEIVVQGKTRKELTEEL 382


>gi|398313810|emb|CCI89157.1| DNA topoisomerase, phage-associated [Yersinia phage phiD1]
          Length = 442

 Score =  137 bits (345), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 196/390 (50%), Gaps = 30/390 (7%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            ++ E + ++M  ++ R+IP+M+DG KP QR ++  +    + N  K  K+A  +G V++ 
Sbjct: 12   IDNEALAYAMYTVENRAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD- 70

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
              YHHGE S       MA  +  +NN  LL   G FG+R    + AA++RYIF R+S   
Sbjct: 71   LGYHHGENSAQDAGALMANTW--NNNFPLLDGQGNFGSRTV--QKAAASRYIFARVS--- 123

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            +  +    D     +++D + I P +Y+PIIPTV +NG  GI TG+++YI  ++   +  
Sbjct: 124  KNFYNVXXDXXXAXVHQDKEHIPPAFYLPIIPTVXLNGVSGIATGYATYILPHSVSSVKK 183

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
             V + L G+ +      +  F G + +   +     Y + G  +  + T + I E+P   
Sbjct: 184  AVLQALQGKKVTKPKVEFPEFRGEVVEIDGQ-----YEIRGTYKFTSRTQMHITEIP--- 235

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSD---DTTVDFEV-FLSEESMMRTKQE---GLLK 994
            +  D   ++  I+D  +   +GF  + D   +    F+V F  E S+   ++E    ++K
Sbjct: 236  YKYDRETYVSKILDPLED--KGFITWDDACGEHGFGFKVKFRKEYSLSDNEEERHAKIMK 293

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             F L    S  N+ + + KG ++ YD    ++++F  +R  + +KR   +++  E     
Sbjct: 294  DFGLIERRS-QNITVINEKGKLQVYDNVVDLIKDFVEVRKTYVQKRIDNKIKETESAFRL 352

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
               K  FI  V++GEIVV  + R +L  EL
Sbjct: 353  AFAKAHFIKKVISGEIVVQGKTRKELTEEL 382


>gi|397134278|gb|AFO10785.1| hypothetical protein ECML134_259 [Escherichia phage ECML-134]
          Length = 442

 Score =  137 bits (345), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 197/390 (50%), Gaps = 30/390 (7%)

Query: 706  VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
            ++ E + ++M  ++ R+IP+M+DG KP QR ++  +    + N  K  K+A  +G V++ 
Sbjct: 12   IDNEALAYAMYTVENRAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD- 70

Query: 762  SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
              YHHGE S       MA  +  +NN  LL   G FG+R    + AA++RYIF R+S   
Sbjct: 71   LGYHHGENSAQDAGALMANTW--NNNFPLLDGQGNFGSRTV--QKAAASRYIFARVS--- 123

Query: 822  RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
            +  +    D     +++D + I P +Y+PIIPTVL+NG  GI TG+++YI  ++   +  
Sbjct: 124  KNFYNVYKDTEYAPVHQDKEHIPPAFYLPIIPTVLLNGVSGIATGYATYILPHSVSSVKK 183

Query: 882  NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
             V + L G+ +      +  F G + +   +     Y + G  +  + T + I E+P   
Sbjct: 184  AVLQALQGKKVTKPKVEFPEFRGEVVEIDGQ-----YEIRGTYKFTSRTQMHITEIP--- 235

Query: 942  WTQDYREFLESIIDQNDSFIRGFRQYSD---DTTVDFEV-FLSEESMMRTKQE---GLLK 994
            +  D   ++  I+D  +   +GF  + D   +    F+V F  E S+   ++E    ++K
Sbjct: 236  YKYDRETYVSKILDPLED--KGFITWDDACGEHGFGFKVKFRKEYSLSDNEEERHAKIMK 293

Query: 995  KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
             F L    S  N+ + + KG ++ YD    ++++F  +R  + +KR   +++  E     
Sbjct: 294  DFGLIERRS-QNITVINEKGKLQVYDNVVDLIKDFVEVRKTYVQKRIDNKIKETESAFRL 352

Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
               K  FI  V++GEIVV  + R +L  EL
Sbjct: 353  AFAKAHFIKKVISGEIVVQGKTRKELTEEL 382


>gi|304439074|ref|ZP_07398993.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
           duerdenii ATCC BAA-1640]
 gi|304372433|gb|EFM26020.1| DNA topoisomerase (ATP-hydrolyzing) subunit B [Peptoniphilus
           duerdenii ATCC BAA-1640]
          Length = 637

 Score =  137 bits (345), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 161/636 (25%), Positives = 264/636 (41%), Gaps = 103/636 (16%)

Query: 32  QKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAA 91
           Q  + LE + LRP  YIGS                       +   GL+ +  E++ N+ 
Sbjct: 13  QVLTGLEPVRLRPGMYIGS-----------------------TGPKGLHHLIYEVVDNSI 49

Query: 92  DNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDD 151
           D   +    D ++V I ++   +SV ++G G+PVE H + G    E +   L     + +
Sbjct: 50  DEALQG-MCDTIEVTILKDGS-VSVSDNGSGIPVEKHPQTGKSTVETVLTILHAGGKFKE 107

Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
              K +GG +G G  + N  ST+ + E    K+L  Y+Q F+  + +     +   KE  
Sbjct: 108 GAYKVSGGLHGVGVSVVNALSTKLVAEVKRNKKL--YRQEFSRGVPQTELEVVEDLKEDV 165

Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP-------- 263
             T + F PD   F     E +V   ++KR  ++A  L K+VK+     RV         
Sbjct: 166 TGTTIIFHPDPEIFETVEFEFEV---LEKRFREMA-FLNKNVKIIFTDERVDRQEIFHYE 221

Query: 264 --VKSFAEYVDM----YPKSVTRFHERV-NERWEICVTLSEGQFQQV-SFVNGIATIKGG 315
             +KSF EY++       K V  F E   N + E+ +  ++   + V +F N I T +GG
Sbjct: 222 GGIKSFVEYINRKKTKIHKDVIYFEELAENTQVEVAIQYTDSYSENVLTFANNINTEEGG 281

Query: 316 THVDYVANQVANHVMAVVNKKN----KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
           TH+      V   +     K N    K  N+   +V+  +   ++  I NP F+ QTK  
Sbjct: 282 THLSGFRASVTRTINDYGRKYNIIKEKEENLSGDDVREGMTAIISVKIPNPQFEGQTKSK 341

Query: 372 LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
           L   ++       +S      +     + + +L  A   Q++  ++      +  R  S 
Sbjct: 342 LGNSETRGIVDGVVSNGLTAYLEENPKVAKIILDKA--LQARRAREAARKARDLTRKRSI 399

Query: 432 LEDANLAGGRNSEQC--------TLILTEGDSAKALAMAGLSVVGRDRF--GVFPLRGKL 481
           L+   L G    + C         + L EGDSA      G +  GRD     V PLRGK+
Sbjct: 400 LDSMTLPG--KLKDCHESDISVNEIFLVEGDSA-----GGTAKDGRDSNIQAVLPLRGKI 452

Query: 482 LNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLW 541
           +NV +A  +++LN+ EI  +    G     E+ ++ +LRYG ++IMTD            
Sbjct: 453 MNVEKARLDKILNSDEIKAMITAFGTGIDKEF-DINNLRYGKIIIMTD------------ 499

Query: 542 FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
                            D DG+HI  LL+ F       L++     V    P +    + 
Sbjct: 500 ----------------ADVDGAHIMTLLLTFFFRHMKPLIEHGHIYVA--KPPLYGVKRG 541

Query: 602 GKVLSF-YSMPDYEAWKESLGGNASSWSIKYYKGLG 636
            KV+ + Y   + E+    LG +  ++ I  YKGLG
Sbjct: 542 EKVIRYCYDDEELESALNELGRD-KNYKIARYKGLG 576


>gi|402311474|ref|ZP_10830417.1| DNA gyrase, B subunit [Lachnospiraceae bacterium ICM7]
 gi|400372329|gb|EJP25274.1| DNA gyrase, B subunit [Lachnospiraceae bacterium ICM7]
          Length = 637

 Score =  137 bits (345), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 170/632 (26%), Positives = 280/632 (44%), Gaps = 105/632 (16%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           LE + +RP  YIGSI                          GL+ +  EI+ N+ D    
Sbjct: 16  LEAVRVRPGMYIGSISSR-----------------------GLHHLVYEIVDNSVDEALA 52

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               + +KV I++++  I+V ++G G+PV+I Q+ G    E++F  L     +     KT
Sbjct: 53  GFCTE-IKVKINEDNS-ITVRDNGRGIPVDIQQKAGKPALEVVFTILHAGGKFGGGGYKT 110

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKV 216
           +GG +G GA + N  ST   ++    K  K Y   F      ++   I +C  G++ T+V
Sbjct: 111 SGGLHGVGASVVNALSTWLDVKVY--KEGKIYHMRFEKGKVVENMHVIGECDPGESGTEV 168

Query: 217 SFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA-------- 268
           SF PD   F  T  + D+   +K R+ + A  L K++K+ L   RV  K  +        
Sbjct: 169 SFLPDATIFEETVYDFDI---LKVRLRETA-FLTKALKIVLIDDRVEKKEMSFHYEGGIK 224

Query: 269 EYVDMYPKSVTRFHERV------------NERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
           E+V    K     ++ V                +   T +EG +   +FVN I T +GGT
Sbjct: 225 EFVTYLNKGKAPIYDEVIYCEGVKEKVVVEVAMQHNDTYTEGIY---TFVNNINTPEGGT 281

Query: 317 HVDYVANQVANHV--MAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETL 372
           H+    N +       A  NK  K    N+   +++  L   ++  I +P F+ QTK+ L
Sbjct: 282 HLSGFKNALTKTFNEYARNNKLLKENEDNLSGEDIREGLVAIISVKIQDPQFEGQTKQKL 341

Query: 373 TLRQSSFGSKCELSEE---FLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED-VRG 428
              ++       +SE+   FL++    + ++      A   ++   K  D T+ +  + G
Sbjct: 342 GNSEAQTAVNAIVSEKLTYFLEQNPGIAKLISDKAITAQRARAAARKARDLTRRKSALDG 401

Query: 429 IS---KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
           +S   KL D +    +N E+C + + EGDSA   A    S   RD   + PLRGK+LNV 
Sbjct: 402 MSLPGKLADCS---SKNPEECEIFIVEGDSAGGSAK---SARKRDTQAILPLRGKILNVE 455

Query: 486 EASSNQVLNNSEIGNIKKILGLKQGVEYN-NVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
           +A  ++V +N+EI ++  I     G++ + ++  LRY  ++IMTD               
Sbjct: 456 KARPDKVYSNAEIKSM--ITAFGTGIQEDFDISKLRYNKIIIMTD--------------- 498

Query: 545 IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV 604
                         D DG+HI  L++ FI+ F P L+K     V    P +    KN KV
Sbjct: 499 -------------ADVDGAHIDTLMLTFIYRFMPELIK--EGHVYLAQPPLYKLEKNKKV 543

Query: 605 LSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
              YS  + +   + +G + ++  I+ YKGLG
Sbjct: 544 WYAYSDEELDNILKEVGRDQNN-KIQRYKGLG 574


>gi|149369783|ref|ZP_01889634.1| DNA gyrase subunit B [unidentified eubacterium SCB49]
 gi|149356274|gb|EDM44830.1| DNA gyrase subunit B [unidentified eubacterium SCB49]
          Length = 655

 Score =  137 bits (345), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 161/640 (25%), Positives = 272/640 (42%), Gaps = 114/640 (17%)

Query: 37  LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
           +EH+ +RP  YIG +                        V GL+ +  E++ N+ D +  
Sbjct: 30  MEHVRMRPSMYIGDVG-----------------------VRGLHHLVYEVIDNSID-EAL 65

Query: 97  DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
               D V V I++++  I+V ++G G+PV+IH++EGV   +++   +     +D +  K 
Sbjct: 66  AGHCDTVDVWINEDNS-ITVRDNGRGIPVDIHKKEGVSALQVVMTKIGAGGKFDKDSYKV 124

Query: 157 TGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKV 216
           +GG +G G    N  S    ++    +    Y+Q +    GK   P        D  T+V
Sbjct: 125 SGGLHGVGVSCVNALSVH--LKATVFRNGSIYEQEYER--GKAMYPVKQVGSTEDRGTEV 180

Query: 217 SFKPDLAKFNMTHLED-DVVALMKKRVVDLAGCLGKSVKVELNGHRV------------- 262
           +FKPD   F  T   + D +A    R+ +LA  L K + + L   R              
Sbjct: 181 TFKPDEEIFKQTREYNYDTLA---SRLRELA-FLNKGITITLEDKREVEEDGSFKGETFH 236

Query: 263 ---PVKSFAEYVD-----MYPKSVTRFHERVNERWEICVTLSEGQFQQV-SFVNGIATIK 313
               +K F  ++D     +    ++   E+ +   E+ +  +    + + S+VN I T +
Sbjct: 237 STEGLKEFVRFLDGNREMLIADVISMEGEKNDIPVEVAMVYNTSYNENLHSYVNNINTHE 296

Query: 314 GGTHVDYVANQVANHVMAVVNKKNK----NANVKAHNVKNHLWVFVNALIDNPAFDSQTK 369
           GGTH+      + + +    +          ++   + +  L   V+  +  P F+ QTK
Sbjct: 297 GGTHLSGFRRGLTHTLKKYADASGMLDKLKFDISGDDFREGLTAIVSVKVQEPQFEGQTK 356

Query: 370 ETLTLRQSSFG---SKCELSEEFLKKV--TAKSGIVETLLSWANFKQSKDLKKNDGTKTE 424
             L  R+ +     +  E+ E +L++    AK+ + + +L+      ++  ++    KT 
Sbjct: 357 TKLGNREVTSAVSQAVSEMLENYLEENPNDAKTIVQKVILAATARHAARKAREMVQRKTV 416

Query: 425 DVRG--ISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF--GVFPLRGK 480
              G    KL D +    ++ E+C + L EGDSA      G +  GRDR    + PLRGK
Sbjct: 417 MSGGGLPGKLSDCS---EQDPERCEVFLVEGDSA-----GGTAKQGRDRNFQAILPLRGK 468

Query: 481 LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN----NVKSLRYGHLMIMTDQVLLAPL 536
           +LNV +A  ++V  N EI NI   LG+  G E +    N+  LRY  ++IM D       
Sbjct: 469 ILNVEKAMQHKVFENEEIRNIFTALGVTIGTEEDSKALNLSKLRYHKVVIMCDA------ 522

Query: 537 SFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVK 596
                                 D DGSHI  L++ F   +   L  + S  V   TP + 
Sbjct: 523 ----------------------DVDGSHISTLILTFFFRYMREL--VESGYVYIATPPLY 558

Query: 597 ATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
              K  K    +S  + +A  E  GG+A   SI+ YKGLG
Sbjct: 559 LVKKGAKKEYAWSDAERDALNEKFGGSA---SIQRYKGLG 595


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.313    0.132    0.373 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,582,981,519
Number of Sequences: 23463169
Number of extensions: 1045688192
Number of successful extensions: 3287518
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6531
Number of HSP's successfully gapped in prelim test: 31229
Number of HSP's that attempted gapping in prelim test: 3133195
Number of HSP's gapped (non-prelim): 100923
length of query: 1484
length of database: 8,064,228,071
effective HSP length: 156
effective length of query: 1328
effective length of database: 8,698,941,003
effective search space: 11552193651984
effective search space used: 11552193651984
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 84 (37.0 bits)