BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000459
(1484 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P30182|TOP2_ARATH DNA topoisomerase 2 OS=Arabidopsis thaliana GN=TOP2 PE=2 SV=2
Length = 1473
Score = 1819 bits (4712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 967/1510 (64%), Positives = 1137/1510 (75%), Gaps = 99/1510 (6%)
Query: 6 RLPLTTSNNANVVGPTAPN------KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALW 59
+LPL SN ANV A + KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQ LW
Sbjct: 4 KLPLQNSNAANVAKAPAKSRAAAGGKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQTLW 63
Query: 60 IYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNS 119
+YE++ M+ R ++YVPGLYKIFDEILVNAADNKQRD KMD+V+VVID E +LISV NS
Sbjct: 64 VYEKDE--MVQRPVTYVPGLYKIFDEILVNAADNKQRDAKMDSVQVVIDVEQNLISVCNS 121
Query: 120 GDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 179
G GVPVEIHQEEG+YVPE+IFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET
Sbjct: 122 GAGVPVEIHQEEGIYVPEMIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET 181
Query: 180 ADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMK 239
ADGKRLKKYKQVF NNMGKKSEP I+KC + +NWTKV+FKPDL KFNMT LEDDVVALM
Sbjct: 182 ADGKRLKKYKQVFENNMGKKSEPVITKCNKSENWTKVTFKPDLKKFNMTELEDDVVALMS 241
Query: 240 KRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS---------VTRFHERVNERWE 290
KRV D+AGCLGKSVKVELNG ++PVKSF +YVD+Y + + R E+VN+RWE
Sbjct: 242 KRVFDIAGCLGKSVKVELNGKQIPVKSFTDYVDLYLSAANKSRTEDPLPRLTEKVNDRWE 301
Query: 291 ICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNH 350
+CV+LSEGQFQQVSFVN IATIKGGTHVDYV +Q+ NH++A VNKKNKNANVKAHNVKNH
Sbjct: 302 VCVSLSEGQFQQVSFVNSIATIKGGTHVDYVTSQITNHIVAAVNKKNKNANVKAHNVKNH 361
Query: 351 LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFK 410
LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE+FLKKV KSG+VE LLSWA+FK
Sbjct: 362 LWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKV-GKSGVVENLLSWADFK 420
Query: 411 QSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD 470
Q+KDLKK+DG KT V + KL+DA AGG+NS CTLILTEGDSAK+LA+AG SV+G +
Sbjct: 421 QNKDLKKSDGAKTGRVL-VEKLDDAAEAGGKNSRLCTLILTEGDSAKSLALAGRSVLGNN 479
Query: 471 RFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQ 530
GVFPLRGKLLNVREAS+ Q+ NN EI N+KKILGLKQ ++Y NV SLRYG +MIMTDQ
Sbjct: 480 YCGVFPLRGKLLNVREASTTQITNNKEIENLKKILGLKQNMKYENVNSLRYGQMMIMTDQ 539
Query: 531 VLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEF 590
DHDGSHIKGLLINFIHSFWPSLL++PSFLVEF
Sbjct: 540 ----------------------------DHDGSHIKGLLINFIHSFWPSLLQVPSFLVEF 571
Query: 591 ITPIVKATNKNGK-VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
ITPIVKAT K K VLSFYSMP+YE WKESL GNA+ W IKYYKGLGTST++EGKEYF N
Sbjct: 572 ITPIVKATRKGTKKVLSFYSMPEYEEWKESLKGNATGWDIKYYKGLGTSTAEEGKEYFSN 631
Query: 650 ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKE 709
+ LHKKDFVWED+QDGEAIELAFSKKKIEARK WL + PGNHLDQ++ + YSDFVNKE
Sbjct: 632 LGLHKKDFVWEDEQDGEAIELAFSKKKIEARKNWLSSYVPGNHLDQRQPKVTYSDFVNKE 691
Query: 710 LILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQ 769
LILFSMADLQRSIPSMVDGLKPGQRKILF +FK+ KE KVAQ GYVS SAYHHGEQ
Sbjct: 692 LILFSMADLQRSIPSMVDGLKPGQRKILFVAFKKIARKEMKVAQLVGYVSLLSAYHHGEQ 751
Query: 770 SLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDD 829
SLAS I+GMAQD+VGSNNINLL PNGQFGTR GGKD+ASARYIFT+LSP+TR LFPKDD
Sbjct: 752 SLASAIIGMAQDYVGSNNINLLLPNGQFGTRTSGGKDSASARYIFTKLSPVTRILFPKDD 811
Query: 830 DKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG 889
D LLDYLNEDGQ+IEPTWYMPIIPTVLVNG+EGIGTGWS++IPNYNPR+IVANVRRLLNG
Sbjct: 812 DLLLDYLNEDGQRIEPTWYMPIIPTVLVNGAEGIGTGWSTFIPNYNPREIVANVRRLLNG 871
Query: 890 EMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREF 949
E M PM PWYRGF GTIEKTASKE G TYT+TG+ EEV+ETT+RI ELPIRRW DY+ F
Sbjct: 872 ESMVPMDPWYRGFKGTIEKTASKEGGCTYTITGLYEEVDETTIRITELPIRRWNDDYKNF 931
Query: 950 LESI-IDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMH 1008
L+S+ D F + + Y+D+ +VDF++ LSEE+M+ +QEG LKKFKLTTTI+TSNMH
Sbjct: 932 LQSLKTDNGAPFFQDVKAYNDEKSVDFDLILSEENMLAARQEGFLKKFKLTTTIATSNMH 991
Query: 1009 LFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNG 1068
LFD KGVIKKY TPEQILEEFF +R E+YEKRK+ ++N+E+ELLKLENK RFIL V++G
Sbjct: 992 LFDKKGVIKKYVTPEQILEEFFDLRFEYYEKRKETVVKNMEIELLKLENKARFILAVLSG 1051
Query: 1069 EIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDE--TEESEE---NPEVVNG- 1122
EI+VN RK+ D++ +LRQKGFTPFP+ ++S+EA +AGA D+ EE EE +PE +
Sbjct: 1052 EIIVNKRKKADIVEDLRQKGFTPFPRKAESVEAAIAGAVDDDAAEEPEEILVDPESSSSY 1111
Query: 1123 VQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLD 1182
+ +YDYLL+MAI +LT+EKV+ LLADRDK+ V D++K TP+SLW+ DL++LD +L+
Sbjct: 1112 IPGSEYDYLLAMAIASLTIEKVEELLADRDKMIIAVADMKKTTPKSLWLSDLESLDKELE 1171
Query: 1183 ELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATE-------AM 1235
+LD DA+ ++ + +G + KR K + A +E AM
Sbjct: 1172 KLDLKDAQVQQAIEAAQKKIRAKSGAAVKVKRQAPKKPAPKKTTKKASESETTEASYSAM 1231
Query: 1236 GEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPDQS 1295
+NV +VVKPK R G KK +E + D +A++ ++P Q
Sbjct: 1232 DTDNNVAEVVKPKARQGAKKKASESETTEASHSAMDTDNNVAEV--------VKPKGRQG 1283
Query: 1296 G----------VMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIA 1345
V E E + + + + + +A T ETS + DDD E+A
Sbjct: 1284 AKKKAPAAAKEVEEDEMLDLAQRLAQYNFGSAPADSSKTAETSKAIAVDDDDDDVVVEVA 1343
Query: 1346 APEEGKKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKPAESSPEKKV 1405
++G G AA AA+ + +Q AS TE+L SPEKKV
Sbjct: 1344 PVKKG--------GRKPAATKAAKPPAAPRKRGKQTVAS------TEVLAIG-VSPEKKV 1388
Query: 1406 RKMRASPFNKKSGSMLGR-AGTIEEPSG---SSPSTSEEVAEVLPPKARPQRANRRQARY 1461
RKMR+SPFNKKS S++ R A EE S + S+SE+ + +RPQRANRR+ Y
Sbjct: 1389 RKMRSSPFNKKSSSVMSRLADNKEEESSENVAGNSSSEKSGGDVSAISRPQRANRRKMTY 1448
Query: 1462 VLSDSESEKA 1471
VLSDSESE A
Sbjct: 1449 VLSDSESESA 1458
>sp|O24308|TOP2_PEA DNA topoisomerase 2 OS=Pisum sativum GN=TOP2 PE=2 SV=1
Length = 1462
Score = 1759 bits (4555), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 943/1543 (61%), Positives = 1123/1543 (72%), Gaps = 144/1543 (9%)
Query: 3 VDKRLPLTTSNNANVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYE 62
++KR PL TSN AN+ P+KTIEEMYQKK+QLEHILLRPDTY+GSIEKHTQ LW+YE
Sbjct: 1 MEKR-PLQTSNAANI-----PSKTIEEMYQKKTQLEHILLRPDTYVGSIEKHTQNLWVYE 54
Query: 63 EESKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDG 122
+ M+HR +SYVPGLYKIFDEILVNAADNKQRDP MD++KV ID E + +SV+N+GDG
Sbjct: 55 NDE--MVHRAVSYVPGLYKIFDEILVNAADNKQRDPSMDSLKVTIDPEANTVSVYNNGDG 112
Query: 123 VPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADG 182
VPVEIHQEE VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADG
Sbjct: 113 VPVEIHQEEKVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADG 172
Query: 183 KRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRV 242
+RLKKYKQVF+NNMG K EP I+KCK +NWTKV+FKPDL KF M +LE+DVVALMKKRV
Sbjct: 173 RRLKKYKQVFSNNMGTKCEPVITKCKASENWTKVTFKPDLEKFKMAYLEEDVVALMKKRV 232
Query: 243 VDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY--------PKSVTRFHERVNERWEICVT 294
+D+AGC GK+VKVELNG + KSF +Y D++ P + R H +V +RWEIC++
Sbjct: 233 LDMAGCFGKTVKVELNGTLIRFKSFRDYADLFLKCAEKSKPMPLPRIHAKVGDRWEICIS 292
Query: 295 LSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVF 354
LS+GQFQQVSFVN IATIKGGTHVDY+ NQ+ ++M VNKK K+ANVKAH VKNHLWVF
Sbjct: 293 LSDGQFQQVSFVNSIATIKGGTHVDYITNQITTYIMNKVNKKKKDANVKAHTVKNHLWVF 352
Query: 355 VNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKD 414
VN+LIDNPAFDSQTKETLT RQ+SFGSKC++ E LK V KSGIV+TLLSWA+FKQSKD
Sbjct: 353 VNSLIDNPAFDSQTKETLTTRQASFGSKCDVPESMLKDV-EKSGIVDTLLSWADFKQSKD 411
Query: 415 LKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGV 474
LKK DGTKT+ +RG K EDAN AGGRNSE+CTLILTEGDSAKALAMAGLSVVGRD +GV
Sbjct: 412 LKKTDGTKTQRLRGC-KAEDANEAGGRNSEKCTLILTEGDSAKALAMAGLSVVGRDHYGV 470
Query: 475 FPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLA 534
FPLRGKLLNVREASS Q+++N EI NIKKILGL+Q EY NVKSLRYGHLMIM DQ
Sbjct: 471 FPLRGKLLNVREASSKQIMDNEEIQNIKKILGLQQNKEYTNVKSLRYGHLMIMADQ---- 526
Query: 535 PLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPI 594
DHDGSHIKGLLINFIHSFWPSLLK+PSFLVEF TP+
Sbjct: 527 ------------------------DHDGSHIKGLLINFIHSFWPSLLKVPSFLVEFTTPV 562
Query: 595 VKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHK 654
++A++ N + SFYSMP+YEAWKE LG +A+SW IKYYKGLGTST +EG+EYF ++ H+
Sbjct: 563 IRASHPNKTITSFYSMPEYEAWKERLGNSATSWKIKYYKGLGTSTPQEGREYFSDLGRHR 622
Query: 655 KDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFS 714
KDF+W+D+ DG AIELAFSKKK E RK W+ FEPG D + K I Y DFVNKELILFS
Sbjct: 623 KDFIWDDELDGNAIELAFSKKKAEGRKIWMRNFEPGTCRDHEAKLINYKDFVNKELILFS 682
Query: 715 MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
ADL F SFK+ KE KVAQF GYVSEHSAYHHGEQSLAST
Sbjct: 683 RADL-------------------FGSFKKKLYKEIKVAQFIGYVSEHSAYHHGEQSLAST 723
Query: 775 ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
I+GMAQDFVGSNNINLL+PNGQFGT N GGKD ASARYI+T LSP+TR LF + DDKLL+
Sbjct: 724 IIGMAQDFVGSNNINLLKPNGQFGTCNLGGKDHASARYIYTELSPVTRCLFHEHDDKLLE 783
Query: 835 YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
YLNEDG+ IEP WYMPIIP VLVNGSEGIGTGWSSYIPNYNPR+I+ANVRRLLNGE + P
Sbjct: 784 YLNEDGKSIEPNWYMPIIPLVLVNGSEGIGTGWSSYIPNYNPREIIANVRRLLNGEELVP 843
Query: 895 MHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII 954
M PWY+GF GTIEK+A KE G Y V G + E++E T RI ELPIR+WTQDY++FLESI
Sbjct: 844 MDPWYKGFRGTIEKSA-KEGG--YIVNGTVTEIDEQTFRITELPIRKWTQDYKQFLESIT 900
Query: 955 DQ----NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
D D I FRQ DD VD E+ + E + QEGL KKFKLT+TISTSNMHLF
Sbjct: 901 DGAPNVKDPLIEDFRQNGDDAIVDIEIKMKPEKIATILQEGLFKKFKLTSTISTSNMHLF 960
Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
D++G KK+DTPEQILEEFF +RL++YEK K+ L NL LL L+NKVRFILGVVNGEI
Sbjct: 961 DAEGN-KKFDTPEQILEEFFPLRLDYYEKSKEYILGNLNRLLLILDNKVRFILGVVNGEI 1019
Query: 1071 VVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSI---- 1126
+V+NRK+ +LL+EL++KGFTP P+ KS + VAGA D+ E +E+ E QS+
Sbjct: 1020 IVSNRKKAELLIELKEKGFTPMPRKGKSTKPQVAGANDDDSEEQEDAEPETASQSVSVEG 1079
Query: 1127 ----DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP-ESLWVKDLDALDMQL 1181
DYD LLS+ IGTLTLE VQ LL D E+ ++ TP SLW+KDLD + +L
Sbjct: 1080 ATWGDYDDLLSLPIGTLTLESVQKLL-DEKTEKEKEYEILSGTPTTSLWLKDLDEFEKKL 1138
Query: 1182 DELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKNDKKS--------NNARATE 1233
DELD A + +R +G+ + AK+ P+ RKN KK+ N++ E
Sbjct: 1139 DELDLKYAEDDRKRAS-QGSKKANGFASKPAKKPPQ-PRKNTKKAKSVEPENDNSSMEIE 1196
Query: 1234 AMGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEEDEVPDLKQRLAKLNEQLASTKLEPSPD 1293
E +V KPKGRA AP + + + ED++ L++RLA N +E S +
Sbjct: 1197 NAVEAAKPAEVAKPKGRA----APKKNIQKEPEDDIQSLQERLAAYN-------IESSGE 1245
Query: 1294 QSGVMETEKVQVPAK-KKEPSKRTAAQKKVVT-VETSDSEDEIIIDDDEAF------EIA 1345
+S ME+E+VQ A KK+ +KR A+KK T V SDS++E+ DD+ + A
Sbjct: 1246 KSQAMESEEVQQKAAGKKQNNKRGGAKKKSSTIVLESDSDNEVNDVDDDDDDFEEVQQKA 1305
Query: 1346 APEEGKKGGRKAAGNS-------KAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKPAE 1398
AP KKGGRK A + AK A KKR KQ S GQ+LLT+ML+PAE
Sbjct: 1306 APV--KKGGRKPAAQNAKKAPAKAPAKAPAAPKKRSVGTKQ----SAGQKLLTDMLQPAE 1359
Query: 1399 ---SSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPS----------GSSPSTSEEVAEVL 1445
+SPEKKVRKMR SPFNKKSGS+LGRA ++ S ++P + +EV E+
Sbjct: 1360 GTGTSPEKKVRKMRESPFNKKSGSILGRAAAAKDISPIADCSAGSASNTPLSEDEVVEIA 1419
Query: 1446 --PPKARPQRANRRQARYVL----SDSESEKATDDSEFDEDED 1482
P +ARPQRANR Q +Y L S+ +S++ + S+F+ED+D
Sbjct: 1420 PQPARARPQRANRTQMKYALSESESEEDSDEDAELSDFEEDDD 1462
>sp|P08096|TOP2_SCHPO DNA topoisomerase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=top2 PE=1 SV=2
Length = 1485
Score = 1240 bits (3209), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 617/1227 (50%), Positives = 843/1227 (68%), Gaps = 64/1227 (5%)
Query: 31 YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
YQ+ + EH+L RPDTYIGSIE T +W+++ E + ++ ++YVPGLYKIFDEI+VNA
Sbjct: 78 YQRLTPREHVLRRPDTYIGSIEPTTSEMWVFDSEKNKLDYKAVTYVPGLYKIFDEIIVNA 137
Query: 91 ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
ADNK RDP M+ +KV +D E ++IS++N+G G+P+EIH +E +Y+PELIFG+LLTSSNYD
Sbjct: 138 ADNKVRDPNMNTLKVTLDPEANVISIYNNGKGIPIEIHDKEKIYIPELIFGNLLTSSNYD 197
Query: 151 DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
DN KK TGGRNGYGAKL NIFSTEF++ETAD +R+KKYKQ + +NM +KSEP I+ K+
Sbjct: 198 DNQKKVTGGRNGYGAKLCNIFSTEFVVETADKERMKKYKQTWYDNMSRKSEPVITSLKKP 257
Query: 211 DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
D +TK++FKPDLAKF M ++DD+V+++K+R+ D+AG + + KV LN R+ + F +Y
Sbjct: 258 DEYTKITFKPDLAKFGMDKIDDDMVSIIKRRIYDMAGTV-RETKVYLNNERISISGFKKY 316
Query: 271 VDMYPKSVTR--------FHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVA 322
V+MY S T+ +E VN+RW++ +S+GQF+QVSFVN I+TI+GGTHV+YVA
Sbjct: 317 VEMYLASDTKPDEEPPRVIYEHVNDRWDVAFAVSDGQFKQVSFVNNISTIRGGTHVNYVA 376
Query: 323 NQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSK 382
N++ + + VV K+NK A VKA +KN++ VFVN I+NP+FDSQTKETLT + S+FGS+
Sbjct: 377 NKIVDAIDEVVKKENKKAPVKAFQIKNYVQVFVNCQIENPSFDSQTKETLTTKVSAFGSQ 436
Query: 383 CELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
C LS++FLK + KS +VE +L +A K + L K DG + G++KLEDAN AG +
Sbjct: 437 CTLSDKFLKAI-KKSSVVEEVLKFATAKADQQLSKGDGGLRSRITGLTKLEDANKAGTKE 495
Query: 443 SEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIK 502
S +C LILTEGDSAK+LA++GLSVVGRD +GVFPLRGKLLNVREAS +Q+LNN EI IK
Sbjct: 496 SHKCVLILTEGDSAKSLAVSGLSVVGRDYYGVFPLRGKLLNVREASHSQILNNKEIQAIK 555
Query: 503 KILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDG 562
KI+G Y +VK LRYGHLMIMTDQ DHDG
Sbjct: 556 KIMGFTHKKTYTDVKGLRYGHLMIMTDQ----------------------------DHDG 587
Query: 563 SHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGG 622
SHIKGL+IN++ S +PSLL+IP FL++FITPI+K T N +V +FY++P+YE WKE+
Sbjct: 588 SHIKGLIINYLESSYPSLLQIPGFLIQFITPIIKCTRGN-QVQAFYTLPEYEYWKEA-NN 645
Query: 623 NASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKK 682
N W IKYYKGLGTS + K YF ++ H K F ++D E IE+AF+KKK + RK+
Sbjct: 646 NGRGWKIKYYKGLGTSDHDDMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKE 705
Query: 683 WLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
WL + PG ++D + I DF+N+ELI FSMAD RSIPS+VDGLKPGQRK+++ FK
Sbjct: 706 WLRTYRPGIYMDYTQPQIPIDDFINRELIQFSMADNIRSIPSVVDGLKPGQRKVVYYCFK 765
Query: 743 RNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQ 802
RN + E KV++ +GYV+ +AYHHGE S+ TI+ +AQ+FVGSNNINLL PNGQFGTR++
Sbjct: 766 RNLVHETKVSRLAGYVASETAYHHGEVSMEQTIVNLAQNFVGSNNINLLMPNGQFGTRSE 825
Query: 803 GGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEG 862
GGK+A+++RY+ T LSP+ R LF +DD+LL+Y N++GQ IEP +Y+PI+P VLVNG+EG
Sbjct: 826 GGKNASASRYLNTALSPLARVLFNSNDDQLLNYQNDEGQWIEPEYYVPILPMVLVNGAEG 885
Query: 863 IGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTG 922
IGTGWS++IPNYNP+DI AN+R +LNGE +E M PWYRGF G+I K A Y ++G
Sbjct: 886 IGTGWSTFIPNYNPKDITANLRHMLNGEPLEIMTPWYRGFRGSITKVAPDR----YKISG 941
Query: 923 IIEEVNETTLRIKELPIRRWTQDYREFLESII---DQNDSFIRGFRQYSDDTTVDFEVFL 979
II ++ E + I ELPIR WTQD +E+LE+ + ++ FI + + + V F V L
Sbjct: 942 IINQIGENKVEITELPIRFWTQDMKEYLEAGLVGTEKIRKFIVDYESHHGEGNVHFNVTL 1001
Query: 980 SEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEK 1039
+E M E L KFKL+ T +TSNM FD+ G IKKYD+ E IL EF+ +RL Y++
Sbjct: 1002 TEAGMKEALNESLEVKFKLSRTQATSNMIAFDASGRIKKYDSVEDILTEFYEVRLRTYQR 1061
Query: 1040 RKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPF--PKNSK 1097
RK+ + LE + N+ RFI ++ GE+VV+ +K+ DL++EL++K F P PK
Sbjct: 1062 RKEHMVNELEKRFDRFSNQARFIHMIIEGELVVSKKKKKDLIVELKEKKFQPISKPKKGH 1121
Query: 1098 SIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEE 1157
++ V A E E+S +V S Y+YLLSM + +LT E+ LL +D++ E
Sbjct: 1122 LVDLEVENALAEEEQS---GDVSQDEDSDAYNYLLSMPLWSLTYERYVELLKKKDEVMAE 1178
Query: 1158 VDDLRKATPESLWVKDLDAL---------DMQ---LDELDKSDARAEEERMKIKGNGNGD 1205
+D L K TP+ LW+ DLDA D+Q L+E S + K +G G
Sbjct: 1179 LDALIKKTPKELWLHDLDAFEHAWNKVMDDIQREMLEEEQSSRDFVNRTKKKPRGKSTGT 1238
Query: 1206 AGPKIVAKRAPKNARKNDKKSNNARAT 1232
P+ +A + A K + S + +T
Sbjct: 1239 RKPRAIAGSSSSTAVKKEASSESKPST 1265
>sp|O42131|TOP2B_CHICK DNA topoisomerase 2-beta OS=Gallus gallus GN=TOP2B PE=2 SV=1
Length = 1627
Score = 1192 bits (3085), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1204 (51%), Positives = 822/1204 (68%), Gaps = 72/1204 (5%)
Query: 21 TAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLY 80
T+ ++E +YQKK+QLEHILLRPDTYIGS+E TQ +W+Y+E+ M R +++VPGLY
Sbjct: 50 TSKKMSVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLY 108
Query: 81 KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
KIFDEILVNAADNKQRD M +K+ ID E ++IS+ N+G G+PV H+ E VYVP LIF
Sbjct: 109 KIFDEILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIF 168
Query: 141 GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
G LLTSSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA + +KQ + NNM K S
Sbjct: 169 GQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTS 228
Query: 201 EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
EP I K EGD++T ++F+PDL+KF M +L+ D+V+LM +R DLAG K VKV LNG
Sbjct: 229 EPKI-KHFEGDDYTCITFQPDLSKFKMENLDKDIVSLMTRRAYDLAGSC-KGVKVMLNGK 286
Query: 261 RVPVKSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATI 312
++PV F YVD+Y K ++ HE VNERW++C+TLSE FQQ+SFVN IAT
Sbjct: 287 KLPVNGFRSYVDLYVKDKLDETGVALKVIHEVVNERWDVCLTLSEKGFQQISFVNSIATT 346
Query: 313 KGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
KGG HVDYV +QV ++ VV KKNK +VK VKNH+WVFVN LI+NP+FDSQTKE
Sbjct: 347 KGGRHVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFVNCLIENPSFDSQTKEN 406
Query: 372 LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGIS 430
+TL+ SFGSKC+LSE+F K + GI+E++L+W FK L KK K ++GI
Sbjct: 407 MTLQPKSFGSKCQLSEKFFK-AASNCGIIESILNWVKFKAQTQLNKKCSSVKHSKIKGIP 465
Query: 431 KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
KL+DAN AGG++S CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS
Sbjct: 466 KLDDANDAGGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHK 525
Query: 491 QVLNNSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFA 547
Q++ N+EI NI KI+GL+ Y + +KSLRYG +MIMTDQ
Sbjct: 526 QIMENAEINNIIKIVGLQYKKSYEDPESLKSLRYGKIMIMTDQ----------------- 568
Query: 548 WITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSF 607
D DGSHIKGLLINFIH WPSLLK FL EFITPIVKA+ KN + LSF
Sbjct: 569 -----------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSF 615
Query: 608 YSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEA 667
YS+P+++ WK+ + N +W IKYYKGLGTST+KE KEYF ++ H+ F + +D A
Sbjct: 616 YSIPEFDEWKKHME-NHKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAA 674
Query: 668 IELAFSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSM 715
I LAFSKKKI+ RK+WL F P L K++ Y+DF+NKELILFS
Sbjct: 675 ITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSN 734
Query: 716 ADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTI 775
+D +RSIPS+VDGLKPGQRK+LF FKRN +E KVAQ +G V+E SAYHHGEQ+L TI
Sbjct: 735 SDNERSIPSLVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTI 794
Query: 776 LGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDY 835
+ +AQ+FVGSNN+NLLQP GQFGTR GGKDAAS RYIFT LSP+ R LFP DD LL +
Sbjct: 795 VNLAQNFVGSNNVNLLQPIGQFGTRLHGGKDAASPRYIFTMLSPLARLLFPSVDDNLLKF 854
Query: 836 LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPM 895
L +D Q++EP WY+PIIP VLVNG+EGIGTGW+ +PNY+ R+IV NVRR+L+G PM
Sbjct: 855 LYDDNQRVEPEWYIPIIPMVLVNGAEGIGTGWACKLPNYDTREIVNNVRRMLDGLDPHPM 914
Query: 896 HPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII 954
P Y+ F GTI++ + Y V+G I V+ T+ I ELP+R WTQ Y+E LE ++
Sbjct: 915 LPNYKNFRGTIQELGQNQ----YVVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPML 970
Query: 955 ---DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFD 1011
++ + I +++Y DTTV F V ++EE + + + GL K FKL T+++ ++M LFD
Sbjct: 971 NGTEKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTSLTCNSMVLFD 1030
Query: 1012 SKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIV 1071
G +KKY+T + IL+EFF +RL +Y RK+ + L E KL N+ RFIL + G+I
Sbjct: 1031 HMGCLKKYETVQDILKEFFDLRLHYYSLRKEWLVGMLGAESTKLNNQARFILEKIQGKIT 1090
Query: 1072 VNNRKRTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
+ NR + DL+ L Q+G+ P K K + A D +++ D++Y
Sbjct: 1091 IENRSKRDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDPQNANDDASSASGSTSGPDFNY 1150
Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
+L+M++ +LT EKV+ L+ RD E++DL++ + LW +DL A ++EL+K +A+
Sbjct: 1151 ILNMSLWSLTKEKVEELIKHRDSKERELNDLKRKSASDLWKEDLAAF---VEELEKVEAQ 1207
Query: 1191 AEEE 1194
E+
Sbjct: 1208 ERED 1211
>sp|Q64399|TOP2B_CRILO DNA topoisomerase 2-beta OS=Cricetulus longicaudatus GN=TOP2B PE=2
SV=1
Length = 1612
Score = 1192 bits (3084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/1199 (52%), Positives = 819/1199 (68%), Gaps = 72/1199 (6%)
Query: 26 TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
++E +YQKK+QLEHILLRPDTYIGS+E TQ +W+Y+E+ M R +++VPGLYKIFDE
Sbjct: 38 SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 96
Query: 86 ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
ILVNAADNKQRD M +KV ID E ++IS+ N+G G+PV H+ E VYVP LIFG LLT
Sbjct: 97 ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 156
Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA + +KQ + NNM K SE I
Sbjct: 157 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 215
Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
K +G+++T ++F+PDLAKF M L+ D+VALM +R DLAG K VKV NG ++PV
Sbjct: 216 KHFDGEDYTCITFQPDLAKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 274
Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
F YVD+Y K ++ HE NERW++C+TLSE FQQ+SFVN IAT KGG H
Sbjct: 275 GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 334
Query: 318 VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
VDYV +QV ++ VV KKNK +VK VKNH+WVF+N LI+NP FDSQTKE +TL+
Sbjct: 335 VDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 394
Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
SFGSKC+LSE+F K + GIVE++L+W FK L KK K ++GI KL+DA
Sbjct: 395 KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 453
Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS Q++ N
Sbjct: 454 NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 513
Query: 496 SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
+EI NI KI+GL+ Y++ +K+LRYG +MIMTDQ
Sbjct: 514 AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 551
Query: 553 CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
D DGSHIKGLLINFIH WPSLLK FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 552 ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 603
Query: 613 YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
++ WK+ + N +W IKYYKGLGTST+KE KEYF ++ H+ F + +D AI LAF
Sbjct: 604 FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 662
Query: 673 SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
SKKKI+ RK+WL F P L K++ Y+DF+NKELILFS +D +R
Sbjct: 663 SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 722
Query: 721 SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
SIPS+VDG KPGQRK+LF FKRN +E KVAQ +G V+E SAYHHGEQ+L TI+ +AQ
Sbjct: 723 SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 782
Query: 781 DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
+FVGSNNINLLQP GQFGTR GGKDAAS RYIFT LS + R LFP DD LL +L +D
Sbjct: 783 NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 842
Query: 841 QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
Q++EP WY+PIIP VL+NG+EGIGTGW+ +PNY+ R+IV NVRR+L+G PM P Y+
Sbjct: 843 QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYK 902
Query: 901 GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
F GTI++ + Y V+G I V+ T+ I ELP+R WTQ Y+E LE ++ D+
Sbjct: 903 NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 958
Query: 957 NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
+ I +++Y DTTV F V ++EE + + + GL K FKL TT++ ++M LFD G +
Sbjct: 959 TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1018
Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
KKY+T + IL+EFF +RL +Y RK+ + L E KL N+ RFIL + G+I + NR
Sbjct: 1019 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1078
Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
+ DL+ L Q+G+ P + A ++T+ ++ +G S D++Y+L+M+
Sbjct: 1079 KKDLIQMLVQRGYESDPVRAWKEAQEKAAEEEDTQNQHDDSSSDSGTPSGPDFNYILNMS 1138
Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
+ +LT EKV+ L+ RD EV+DL++ +P LW +DL A ++ELDK +A+ E+
Sbjct: 1139 LWSLTKEKVEELIKQRDTKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1194
>sp|Q02880|TOP2B_HUMAN DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3
Length = 1626
Score = 1192 bits (3084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1200 (52%), Positives = 820/1200 (68%), Gaps = 74/1200 (6%)
Query: 26 TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
++E +YQKK+QLEHILLRPDTYIGS+E TQ +W+Y+E+ M R +++VPGLYKIFDE
Sbjct: 50 SVERVYQKKTQLEHILLRPDTYIGSVEPLTQFMWVYDEDV-GMNCREVTFVPGLYKIFDE 108
Query: 86 ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
ILVNAADNKQRD M +KV ID E ++IS+ N+G G+PV H+ E VYVP LIFG LLT
Sbjct: 109 ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 168
Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA + +KQ + NNM K SE I
Sbjct: 169 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 227
Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAG-CLGKSVKVELNGHRVPV 264
K +G+++T ++F+PDL+KF M L+ D+VALM +R DLAG C G VKV NG ++PV
Sbjct: 228 KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCRG--VKVMFNGKKLPV 285
Query: 265 KSFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGT 316
F YVD+Y K ++ HE NERW++C+TLSE FQQ+SFVN IAT KGG
Sbjct: 286 NGFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGR 345
Query: 317 HVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLR 375
HVDYV +QV ++ VV KKNK +VK VKNH+WVF+N LI+NP FDSQTKE +TL+
Sbjct: 346 HVDYVVDQVVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQ 405
Query: 376 QSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLED 434
SFGSKC+LSE+F K + GIVE++L+W FK L KK K ++GI KL+D
Sbjct: 406 PKSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDD 464
Query: 435 ANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLN 494
AN AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS Q++
Sbjct: 465 ANDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIME 524
Query: 495 NSEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
N+EI NI KI+GL+ Y++ +K+LRYG +MIMTDQ
Sbjct: 525 NAEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ--------------------- 563
Query: 552 FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMP 611
D DGSHIKGLLINFIH WPSLLK FL EFITPIVKA+ KN + LSFYS+P
Sbjct: 564 -------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIP 614
Query: 612 DYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELA 671
+++ WK+ + N +W IKYYKGLGTST+KE KEYF ++ H+ F + +D AI LA
Sbjct: 615 EFDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLA 673
Query: 672 FSKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQ 719
FSKKKI+ RK+WL F P L K++ Y+DF+NKELILFS +D +
Sbjct: 674 FSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNE 733
Query: 720 RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
RSIPS+VDG KPGQRK+LF FKRN +E KVAQ +G V+E SAYHHGEQ+L TI+ +A
Sbjct: 734 RSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLA 793
Query: 780 QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
Q+FVGSNNINLLQP GQFGTR GGKDAAS RYIFT LS + R LFP DD LL +L +D
Sbjct: 794 QNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDD 853
Query: 840 GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
Q++EP WY+PIIP VL+NG+EGIGTGW+ +PNY+ R+IV NVRR+L+G PM P Y
Sbjct: 854 NQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNY 913
Query: 900 RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---D 955
+ F GTI++ + Y V+G I V+ T+ I ELP+R WTQ Y+E LE ++ D
Sbjct: 914 KNFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTD 969
Query: 956 QNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGV 1015
+ + I +++Y DTTV F V ++EE + + + GL K FKL TT++ ++M LFD G
Sbjct: 970 KTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGC 1029
Query: 1016 IKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNR 1075
+KKY+T + IL+EFF +RL +Y RK+ + L E KL N+ RFIL + G+I + NR
Sbjct: 1030 LKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENR 1089
Query: 1076 KRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
+ DL+ L Q+G+ P + A DET+ ++ +G S D++Y+L+M
Sbjct: 1090 SKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEDETQNQHDDSSSDSGTPSGPDFNYILNM 1149
Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
++ +LT EKV+ L+ RD EV+DL++ +P LW +DL A ++ELDK +++ E+
Sbjct: 1150 SLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVESQERED 1206
>sp|Q64511|TOP2B_MOUSE DNA topoisomerase 2-beta OS=Mus musculus GN=Top2b PE=1 SV=2
Length = 1612
Score = 1190 bits (3079), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/1199 (51%), Positives = 819/1199 (68%), Gaps = 72/1199 (6%)
Query: 26 TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
++E +YQKK+QLEHILLRPDTYIGS+E TQ +W+Y+E+ M R +++VPGLYKIFDE
Sbjct: 38 SVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVYDEDV-GMNCREVTFVPGLYKIFDE 96
Query: 86 ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
ILVNAADNKQRD M +KV ID E ++IS+ N+G G+PV H+ E VYVP LIFG LLT
Sbjct: 97 ILVNAADNKQRDKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLT 156
Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA + +KQ + NNM K SE I
Sbjct: 157 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKI- 215
Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
K +G+++T ++F+PDL+KF M L+ D+VALM +R DLAG K VKV NG ++PV
Sbjct: 216 KHFDGEDYTCITFQPDLSKFKMEKLDKDIVALMTRRAYDLAGSC-KGVKVMFNGKKLPVN 274
Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
F YVD+Y K ++ HE NERW++C+TLSE FQQ+SFVN IAT KGG H
Sbjct: 275 GFRSYVDLYVKDKLDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRH 334
Query: 318 VDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
VDYV +QV + ++ VV KKNK +VK VKNH+WVF+N LI+NP FDSQTKE +TL+
Sbjct: 335 VDYVVDQVVSKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPTFDSQTKENMTLQP 394
Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
SFGSKC+LSE+F K + GIVE++L+W FK L KK K ++GI KL+DA
Sbjct: 395 KSFGSKCQLSEKFFK-AASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDA 453
Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
N AGG++S +CTLILTEGDSAK+LA++GL V+GRDR+GVFPLRGK+LNVREAS Q++ N
Sbjct: 454 NDAGGKHSLECTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN 513
Query: 496 SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
+EI NI KI+GL+ Y++ +K+LRYG +MIMTDQ
Sbjct: 514 AEINNIIKIVGLQYKKSYDDAESLKTLRYGKIMIMTDQ---------------------- 551
Query: 553 CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
D DGSHIKGLLINFIH WPSLLK FL EFITPIVKA+ KN + LSFYS+P+
Sbjct: 552 ------DQDGSHIKGLLINFIHHNWPSLLK-HGFLEEFITPIVKAS-KNKQELSFYSIPE 603
Query: 613 YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
++ WK+ + N +W IKYYKGLGTST+KE KEYF ++ H+ F + +D AI LAF
Sbjct: 604 FDEWKKHIE-NQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILFRYAGPEDDAAITLAF 662
Query: 673 SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
SKKKI+ RK+WL F P L K++ Y+DF+NKELILFS +D +R
Sbjct: 663 SKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDFINKELILFSNSDNER 722
Query: 721 SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
SIPS+VDG KPGQRK+LF FKRN +E KVAQ +G V+E SAYHHGEQ+L TI+ +AQ
Sbjct: 723 SIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYHHGEQALMMTIVNLAQ 782
Query: 781 DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
+FVGSNNINLLQP GQFGTR GGKDAAS RYIFT LS + R LFP DD LL +L +D
Sbjct: 783 NFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLFPAVDDNLLKFLYDDN 842
Query: 841 QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
Q++EP WY+PIIP VL+NG+EGIGTGW+ +PNY+ R+IV NVRR+L G PM P Y+
Sbjct: 843 QRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLEGLDPHPMLPNYK 902
Query: 901 GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
F GTI++ + Y V+G I V+ T+ I ELP+R WTQ Y+E LE ++ D+
Sbjct: 903 NFKGTIQELGQNQ----YAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDK 958
Query: 957 NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
+ I +++Y DTTV F V ++EE + + + GL K FKL TT++ ++M LFD G +
Sbjct: 959 TPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCL 1018
Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
KKY+T + IL+EFF +RL +Y RK+ + L E KL N+ RFIL + G+I + NR
Sbjct: 1019 KKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRS 1078
Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSMA 1135
+ DL+ L Q+G+ P + A ++++ ++ +G S D++Y+L+M+
Sbjct: 1079 KKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEDSQNQHDDSSSDSGTPSGPDFNYILNMS 1138
Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEE 1194
+ +LT EKV+ L+ RD EV+DL++ +P LW +DL A ++ELDK +A+ E+
Sbjct: 1139 LWSLTKEKVEELIKQRDTKGREVNDLKRKSPSDLWKEDLAAF---VEELDKVEAQERED 1194
>sp|P41515|TOP2A_CRIGR DNA topoisomerase 2-alpha OS=Cricetulus griseus GN=TOP2A PE=1 SV=1
Length = 1526
Score = 1188 bits (3074), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/1474 (46%), Positives = 914/1474 (62%), Gaps = 129/1474 (8%)
Query: 26 TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
+IE +YQKK+QLEHILLRPDTYIGS+E TQ +W+Y+E+ + +R +++VPGLYKIFDE
Sbjct: 28 SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 86
Query: 86 ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
ILVNAADNKQRDPKM ++V ID E++LIS+ N+G G+PV H+ E +YVP LIFG LLT
Sbjct: 87 ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 146
Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
SSNYDD+ KK TGGRNGYGAKL NIFST F +ETA + K +KQ + +NMG+ + +
Sbjct: 147 SSNYDDDEKKVTGGRNGYGAKLCNIFSTRFTVETASKEYKKMFKQTWMDNMGRAGDMEL- 205
Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
K G+++T ++F+PDL+KF M L+ D+VALM +R D+AG K VKV LNG+++PVK
Sbjct: 206 KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 264
Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
F YVDMY K ++ HE+VN RWE+C+T+SE FQQ+SFVN IAT KGG H
Sbjct: 265 GFRSYVDMYLKDKLDETGNALKVVHEQVNPRWEVCLTMSEKGFQQISFVNSIATSKGGRH 324
Query: 318 VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
VDYVA+Q+ + ++ VV KKNK VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+
Sbjct: 325 VDYVADQIVSKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 384
Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
SFGS C+LSE+F+K GIVE++L+W FK L KK K ++GI KL+DA
Sbjct: 385 KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQIQLNKKCSAVKHNRIKGIPKLDDA 443
Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
N AG RNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS Q++ N
Sbjct: 444 NDAGSRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 503
Query: 496 SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
+EI NI KI+GL+ Y +++K+LRYG +MIMTDQ
Sbjct: 504 AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 541
Query: 553 CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
D DGSHIKGLLINFIH WPSLL+ FL EFITPIVK + KN + L+FYS+P+
Sbjct: 542 ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQELAFYSLPE 593
Query: 613 YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
+E WK S N W +KYYKGLGTSTSKE KEYF ++ H+ F + +D AI LAF
Sbjct: 594 FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 652
Query: 673 SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
SKK+++ RK+WL F P ++L Q Y+ Y+DF+NKELILFS +D +R
Sbjct: 653 SKKQVDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 712
Query: 721 SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
SIPSMVDGLKPGQRK+LF FKRN +E KVAQ +G V+E S+YHHGE SL TI+ +AQ
Sbjct: 713 SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 772
Query: 781 DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
+FVGSNN+NLLQP GQFGTR GGKD+AS RYIFT LSP+TR LFP DD L +L +D
Sbjct: 773 NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLTRLLFPPKDDHTLKFLYDDN 832
Query: 841 QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
Q++EP WY+PIIP VL+NG+EGIGTGWS IPN++ R++V N+RRLL+GE PM P Y+
Sbjct: 833 QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDIREVVNNIRRLLDGEEPLPMLPSYK 892
Query: 901 GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
F GTIE+ AS + Y + G + +N TT+ I ELPIR WTQ Y+E LE ++ ++
Sbjct: 893 NFKGTIEELASNQ----YVINGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 948
Query: 957 NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
I +R+Y DTTV F + ++EE + ++ GL K FKL T+++ ++M LFD G +
Sbjct: 949 TPPLITDYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1008
Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
KKYDT IL++FF +RL++Y RK+ L L E KL N+ RFIL ++G+I++ N+
Sbjct: 1009 KKYDTVLDILKDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1068
Query: 1077 RTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMA 1135
+ +L+ L Q+G+ P K K + V + E EN + V ++YLL M
Sbjct: 1069 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNENSDSV-AESGPTFNYLLDMP 1127
Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEER 1195
+ LT EK L R++ +E++ L+ +P LW +DL +L+ ++ + + E+
Sbjct: 1128 LWYLTKEKKDELCKQRNEKEQELNTLKNKSPSDLWKEDLAVFIEELEVVEAKEKQDEQVG 1187
Query: 1196 MKIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKK 1255
+ KG ++ + ++ + EA + K R +K
Sbjct: 1188 LPGKGGKAKGKKAQMSEVLPSPHGKRVIPQVTMEMKAEA-----------EKKIRKKIKS 1236
Query: 1256 APAEKLDDDEEDEVPDLKQRLAKLN--EQLASTKLE---------------PSPDQSGVM 1298
E + E+ LKQR+ K E A TK + P D M
Sbjct: 1237 ENVEGTPTENGLELGSLKQRIEKKQKKEPGAMTKKQTTLAFKPIKKGKKRNPWSDSESDM 1296
Query: 1299 ETEK--VQVPAKKKEPSKRTAAQKKVVTVETSDSED---EIIIDDDEAF--------EIA 1345
+ + V VP ++K+P R AA K T++ ED D+DE F +
Sbjct: 1297 SSNESNVDVPPREKDP--RRAATKAKFTMDLDSDEDFSGSDGKDEDEDFFPLDTTPPKTK 1354
Query: 1346 APEEGKKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASLGQRLLTEMLKP--------- 1396
P++ K K ++ + P ++ K PA P A L TE LKP
Sbjct: 1355 IPQKNTKKALKPQKSAMSGDPESDEKDSVPASPGPPAADLPAD--TEQLKPSSKQTVAVK 1412
Query: 1397 -----AESSPEKKVRKMRASPFNKKSGSMLGRAG 1425
++SS K RA P KS S L G
Sbjct: 1413 KTATKSQSSTSTAGTKKRAVPKGSKSDSALNAHG 1446
>sp|Q01320|TOP2A_MOUSE DNA topoisomerase 2-alpha OS=Mus musculus GN=Top2a PE=1 SV=2
Length = 1528
Score = 1184 bits (3064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/1534 (44%), Positives = 935/1534 (60%), Gaps = 140/1534 (9%)
Query: 26 TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
+IE +YQKK+QLEHILLRPDTYIGS+E TQ +W+Y+E+ + +R +++VPGLYKIFDE
Sbjct: 28 SIERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 86
Query: 86 ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
ILVNAADNKQRDPKM ++V ID E+++IS+ N+G G+PV H+ E +YVP LIFG LLT
Sbjct: 87 ILVNAADNKQRDPKMSCIRVTIDPENNVISIWNNGKGIPVVEHKVEKIYVPALIFGQLLT 146
Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA + K +KQ + +NMG+ + +
Sbjct: 147 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGDMEL- 205
Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
K G+++T ++F+PDL+KF M L+ D+VALM +R D+AG K VKV LNG+ +PVK
Sbjct: 206 KPFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNSLPVK 264
Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
F YVD+Y K S+ HE+VN RWE+C+T+SE FQQ+SFVN IAT KGG H
Sbjct: 265 GFRSYVDLYLKDKVDETGNSLKVIHEQVNPRWEVCLTMSERGFQQISFVNSIATSKGGRH 324
Query: 318 VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
VDYVA+Q+ + ++ VV KKNK VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+
Sbjct: 325 VDYVADQIVSKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQA 384
Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
SFGS C+LSE+F+K GIVE++L+W FK L KK K ++GI KL+DA
Sbjct: 385 KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQIQLNKKCSAVKHTKIKGIPKLDDA 443
Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
N AG RNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS Q++ N
Sbjct: 444 NDAGSRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 503
Query: 496 SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
+EI NI KI+GL+ Y +++K+LRYG +MIMTDQ
Sbjct: 504 AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 541
Query: 553 CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
D DGSHIKGLLINFIH WPSLL+ FL EFITPIVK + KN + ++FYS+P+
Sbjct: 542 ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEIAFYSLPE 593
Query: 613 YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
+E WK S N W +KYYKGLGTSTSKE KEYF ++ H+ F + +D AI LAF
Sbjct: 594 FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 652
Query: 673 SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
SKK+++ RK+WL F P ++L Q Y+ Y+DF+NKELILFS +D +R
Sbjct: 653 SKKQVDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQSTSYLTYNDFINKELILFSNSDNER 712
Query: 721 SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
SIPSMVDGLKPGQRK+LF FKRN +E KVAQ +G V+E S+YHHGE SL TI+ +AQ
Sbjct: 713 SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 772
Query: 781 DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
+FVGSNN+NLLQP GQFGTR GGKD+AS RYIFT LSP+ R LFP DD L +L +D
Sbjct: 773 NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPKDDHTLRFLYDDN 832
Query: 841 QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
Q++EP WY+PIIP VL+NG+EGIGTGWS IPN++ R++V N+RRLL+GE PM P Y+
Sbjct: 833 QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLLDGEEPLPMLPSYK 892
Query: 901 GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
F GTIE+ AS + Y + G + ++ TT+ I ELPIR WTQ Y+E LE ++ ++
Sbjct: 893 NFKGTIEELASNQ----YVINGEVAILDSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 948
Query: 957 NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
S I +R+Y DTTV F + ++EE + ++ GL K FKL ++++ ++M LFD G +
Sbjct: 949 TPSLITDYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQSSLTCNSMVLFDHVGCL 1008
Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
KKYDT IL +FF +RL++Y RK+ L L E KL N+ RFIL ++G+IV+ N+
Sbjct: 1009 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKP 1068
Query: 1077 RTDLLLELRQKGFTPFP-KNSKSIEAVVAGATDETEESEENPEVVNGVQS-IDYDYLLSM 1134
+ +L+ L Q+G+ P K K + V + E E + ++ ++YLL M
Sbjct: 1069 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDTETSTSDSAAEAGPTFNYLLDM 1128
Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEE- 1193
+ LT EK L R++ +E++ L++ +P LW +DL +L+ ++ + + E+
Sbjct: 1129 PLWYLTKEKKDELCKQRNEKEQELNTLKQKSPSDLWKEDLAVFIEELEVVEAKEKQDEQV 1188
Query: 1194 -------ERMKIKGNGNGDAGPKIVAKR------------APKNARKNDKKSNNARATEA 1234
+ K D P KR A K RK KS N T A
Sbjct: 1189 GLPGKAGKAKGKKAQMCADVLPSPRGKRVIPQVTVEMKAEAEKKIRKK-IKSENVEGTPA 1247
Query: 1235 --------------------MGEMDNVTKVVKPKGRAGLKKAPAEKLDDDEE------DE 1268
G T KP + G KK P + D D
Sbjct: 1248 EDGAEPGSLRQRIEKKQKKEPGAKKQTTLPFKPV-KKGRKKNPWSDSESDVSSNESNVDV 1306
Query: 1269 VPDLKQRLAKLNEQLASTKLEPSPDQSGVMETE-------------KVQVPAKKKEPSKR 1315
P K++ + + + L+ D SG+ E + K ++P K + + +
Sbjct: 1307 PPRQKEQRSAAAKAKFTVDLDSDEDFSGLDEKDEDEDFLPLDATPPKAKIPPKNTKKALK 1366
Query: 1316 TAAQKKVVTVETSDSEDEI-------IIDDDEAFEIAAPEEGKKGGRKAAGNSKAAKPAA 1368
T V SD +D + D E + P + G +K A S+++ A
Sbjct: 1367 TQGSSMSVVDLESDVKDSVPASPGVPAADFPAETEQSKPSKKTVGVKKTATKSQSSVSTA 1426
Query: 1369 ETKKRGPAKKQQPEASLGQRLLTEMLKPAESSPEKKVRKMRASPFNKKSGSMLGRAGTIE 1428
TKKR K + +++L R ++E PA++ +K + + + + + T +
Sbjct: 1427 GTKKRAAPKGTKSDSALSAR-VSEKPAPAKAKNSRKRKPSSSDSSDSDFERAISKGATSK 1485
Query: 1429 EPSGSSPSTSEEVAEVLPPKARPQRANRRQARYV 1462
+ G ++ + + P+A+ RA R+ +Y+
Sbjct: 1486 KAKGEEQDFPVDLEDTIAPRAKSDRA-RKPIKYL 1518
>sp|P11388|TOP2A_HUMAN DNA topoisomerase 2-alpha OS=Homo sapiens GN=TOP2A PE=1 SV=3
Length = 1531
Score = 1184 bits (3063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/1204 (51%), Positives = 824/1204 (68%), Gaps = 79/1204 (6%)
Query: 26 TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
++E +YQKK+QLEHILLRPDTYIGS+E TQ +W+Y+E+ + +R +++VPGLYKIFDE
Sbjct: 29 SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 87
Query: 86 ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
ILVNAADNKQRDPKM ++V ID E++LIS+ N+G G+PV H+ E +YVP LIFG LLT
Sbjct: 88 ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147
Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA + K +KQ + +NMG+ E +
Sbjct: 148 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206
Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
K G+++T ++F+PDL+KF M L+ D+VALM +R D+AG K VKV LNG+++PVK
Sbjct: 207 KPFNGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265
Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
F YVDMY K S+ HE+VN RWE+C+T+SE FQQ+SFVN IAT KGG H
Sbjct: 266 GFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325
Query: 318 VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
VDYVA+Q+ ++ VV KKNK VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+
Sbjct: 326 VDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQP 385
Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
SFGS C+LSE+F+K GIVE++L+W FK L KK K ++GI KL+DA
Sbjct: 386 KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444
Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
N AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS Q++ N
Sbjct: 445 NDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504
Query: 496 SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
+EI NI KI+GL+ Y +++K+LRYG +MIMTDQ
Sbjct: 505 AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542
Query: 553 CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
D DGSHIKGLLINFIH WPSLL+ FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543 ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 594
Query: 613 YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
+E WK S N W +KYYKGLGTSTSKE KEYF ++ H+ F + +D AI LAF
Sbjct: 595 FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653
Query: 673 SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
SKK+I+ RK+WL F P ++L Q Y+ Y+DF+NKELILFS +D +R
Sbjct: 654 SKKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713
Query: 721 SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
SIPSMVDGLKPGQRK+LF FKRN +E KVAQ +G V+E S+YHHGE SL TI+ +AQ
Sbjct: 714 SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773
Query: 781 DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
+FVGSNN+NLLQP GQFGTR GGKD+AS RYIFT LS + R LFP DD L +L +D
Sbjct: 774 NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDN 833
Query: 841 QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
Q++EP WY+PIIP VL+NG+EGIGTGWS IPN++ R+IV N+RRL++GE PM P Y+
Sbjct: 834 QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMLPSYK 893
Query: 901 GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
F GTIE+ A + Y ++G + +N TT+ I ELP+R WTQ Y+E LE ++ ++
Sbjct: 894 NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPVRTWTQTYKEQVLEPMLNGTEK 949
Query: 957 NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
I +R+Y DTTV F V ++EE + ++ GL K FKL T+++ ++M LFD G +
Sbjct: 950 TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009
Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
KKYDT IL +FF +RL++Y RK+ L L E KL N+ RFIL ++G+I++ N+
Sbjct: 1010 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069
Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
+ +L+ L Q+G+ P K + +D +E+E++ V + + ++Y
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTDSGPT--FNY 1127
Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
LL M + LT EK L R++ +E+D L++ +P LW +DL ++EL+ +A+
Sbjct: 1128 LLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATF---IEELEAVEAK 1184
Query: 1191 AEEE 1194
+++
Sbjct: 1185 EKQD 1188
>sp|O42130|TOP2A_CHICK DNA topoisomerase 2-alpha OS=Gallus gallus GN=TOP2A PE=2 SV=2
Length = 1553
Score = 1184 bits (3063), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 685/1493 (45%), Positives = 930/1493 (62%), Gaps = 121/1493 (8%)
Query: 26 TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
++E +YQKK+QLEHILLRPDTYIGS+E TQ +W+++E+ + R +++VPGLYKIFDE
Sbjct: 30 SVERIYQKKTQLEHILLRPDTYIGSVETVTQQMWVFDEDV-GLNCRDVTFVPGLYKIFDE 88
Query: 86 ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
ILVNAADNKQRD M +KV ID E++ ISV N+G G+PV H+ E VYVP LIFG LLT
Sbjct: 89 ILVNAADNKQRDKSMSCIKVTIDPENNTISVWNNGKGIPVVEHKVEKVYVPALIFGQLLT 148
Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA + K +KQ +T+NMGK E +
Sbjct: 149 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACREYKKLFKQTWTDNMGKAGEMTL- 207
Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
K +G+++T V+F+PDL+KF MT L+ D+VALM +R D+AG K VKV LNG R+PVK
Sbjct: 208 KHFDGEDYTCVTFQPDLSKFKMTILDKDIVALMSRRAYDIAGST-KDVKVFLNGKRLPVK 266
Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
F YVD+Y K ++ HE VN RWE+C+TLSE FQQVSFVN IAT KGG H
Sbjct: 267 GFRSYVDLYLKDKVDETGNALKVIHEEVNSRWEVCLTLSEKGFQQVSFVNSIATTKGGRH 326
Query: 318 VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
VDYVA+Q+ ++ VV KKNKN VK VKNH+W+FVN+LI+NP FDSQTKE +TL+
Sbjct: 327 VDYVADQIVTKLIDVVKKKNKNGVGVKPFQVKNHMWIFVNSLIENPTFDSQTKENMTLQA 386
Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
SFGS C+LSE+F+K GIVE++L+W FK L KK K ++G+ KL+DA
Sbjct: 387 KSFGSTCKLSEKFIKGAVG-CGIVESILNWVKFKAQTQLNKKCSAVKHTKIKGVPKLDDA 445
Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
N AG +NS CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS Q++ N
Sbjct: 446 NDAGSKNSIDCTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKMLNVREASHKQIMEN 505
Query: 496 SEIGNIKKILGLKQGVEYNN---VKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
+EI NI KI+GL+ Y + +KSLRYG +MIMTDQ
Sbjct: 506 AEINNIIKIVGLQYKKNYEDRESLKSLRYGKIMIMTDQ---------------------- 543
Query: 553 CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
D DGSHIKGLLINFIH WPSLL+ +FL EFITPI+K + KN + + FYS+P+
Sbjct: 544 ------DQDGSHIKGLLINFIHHNWPSLLR-HNFLEEFITPIIKVS-KNKEEIPFYSIPE 595
Query: 613 YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
+E WK S N +SW IKYYKGLGTSTSKE KEYF ++ H+ F + +D AI LAF
Sbjct: 596 FEEWKSSTQ-NYNSWKIKYYKGLGTSTSKEAKEYFADMARHRIGFKYSGPEDDAAITLAF 654
Query: 673 SKKKIEARKKWLLQFE-----------PGNHLDQKE-KYIKYSDFVNKELILFSMADLQR 720
SKKK+E RK+WL F P ++L K+ Y+ Y+DF+NKEL+LFS +D +R
Sbjct: 655 SKKKVEERKEWLTNFMEDRRQRNVHGLPEDYLYGKDTNYLTYNDFINKELVLFSNSDNER 714
Query: 721 SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
SIPS+VDGLKPGQRK+LF FKRN +E K AQ +G V+E S+YHHGE SL TI+ +AQ
Sbjct: 715 SIPSLVDGLKPGQRKVLFTCFKRNDKREVKGAQLAGSVAEMSSYHHGEASLMMTIINLAQ 774
Query: 781 DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
+FVGSNN+NLLQP GQFGTR GGKD+AS RYIFT LSP+ R LFP DD +L +L +D
Sbjct: 775 NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPVDDNVLRFLYDDN 834
Query: 841 QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
Q++EP WYMPIIP VL+NG+EGIGTGWS IPN++ R+ V N+R LL+G+ PM P Y+
Sbjct: 835 QRVEPEWYMPIIPMVLINGAEGIGTGWSCKIPNFDIRETVNNIRCLLDGKEPLPMLPSYK 894
Query: 901 GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
F GTI++ + Y ++G + ++ TT+ I ELP+R WTQ Y+E LE ++ ++
Sbjct: 895 NFKGTIDELGPNQ----YVISGEVSILDSTTIEITELPVRTWTQTYKEQVLEPMLNGTEK 950
Query: 957 NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
I +++Y DTTV F V +SEE + + GL K FKL T ++ ++M LFD G +
Sbjct: 951 TPPLITDYKEYHTDTTVKFVVKMSEEKLAEAEAVGLHKVFKLQTNLTCNSMVLFDHVGFL 1010
Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
KKY++P+ IL+EFF +RL +Y RK+ + L E KL N+ RFIL ++G+IV+ N+
Sbjct: 1011 KKYESPQDILKEFFELRLRYYGLRKEWLIGMLGAESAKLNNQARFILEKIDGKIVIENKP 1070
Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAI 1136
+ +L+ L Q+G+ S ++A E EE +E+ E D++YLL+M +
Sbjct: 1071 KKELIQVLIQRGY-----ESDPVKAWKELQNKEEEEGDESGEESAAATGPDFNYLLNMPL 1125
Query: 1137 GTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERM 1196
LT EK L RD ++E++DL+ +P LW +DL A ++ELD +A+ ++ M
Sbjct: 1126 WYLTKEKKDELCKQRDNKDKELEDLKHKSPSDLWKEDLAAF---VEELDAVEAKQMQDEM 1182
Query: 1197 KIKGNGNGDAGPKIVAKRAPKNARKNDKKSNNAR---ATEAMGEMDNVTKVVKPKGRAGL 1253
G G + K + ++ K+ A + + + VT +K + +
Sbjct: 1183 A------GITGKPLKVKGGKQGGKQKVTKAQLAEVMPSPHGIRVVPRVTAEMKAEAEKRI 1236
Query: 1254 KKA-PAEKLDDDE--------EDEVPDLKQRLAKLNEQLASTKLE--------------P 1290
KK +EK + DE + E LKQRLA+ + TK + P
Sbjct: 1237 KKKIKSEKNESDEKQEGNSSGDKEPSSLKQRLAQKRKAEQGTKRQTTLPFKPIKKMKRNP 1296
Query: 1291 SPDQSGVMETEKVQVPAKKKEPSKRTAAQKKVVTVETSDSEDEIIIDDDEAFEIAAPEEG 1350
D E++ +VP+K++ ++ AA+ K + SD++ + DE E EG
Sbjct: 1297 WSDSESDSESDDFEVPSKRERVVRQAAAKIKPMVNSDSDAD---LTSSDEDSEYQENSEG 1353
Query: 1351 KKGGRKAAGNSKAAKPAAETKKRGPAKKQQPEASL----GQRLLTEMLKPAESSPEKKVR 1406
+ A +K+G A K++P Q + E ++P V
Sbjct: 1354 NTDSDTTSKKKPPKAKAVPKEKKGKAPKEKPLPDAVPVRVQNVAAESASQDPAAPPVSVP 1413
Query: 1407 KMRASPFNKKSGSMLGRAGTIEEPSGSSPSTSEEVAEVLPPKARPQRANRRQA 1459
+ +A P K + + G +PS T ++ A PKA P+RA R ++
Sbjct: 1414 RAQAVP-KKPAAAKKGSTAKDNQPSIMDILTKKKAA----PKA-PRRAQREES 1460
>sp|O46374|TOP2A_PIG DNA topoisomerase 2-alpha OS=Sus scrofa GN=TOP2A PE=2 SV=1
Length = 1533
Score = 1179 bits (3049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/1203 (51%), Positives = 820/1203 (68%), Gaps = 76/1203 (6%)
Query: 26 TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
+IE +YQKK+QLEHILLRPDTYIGS+E TQ +W+Y+E+ + +R +++VPGLYKIFDE
Sbjct: 29 SIERIYQKKTQLEHILLRPDTYIGSVESVTQQMWVYDEDI-GINYREVTFVPGLYKIFDE 87
Query: 86 ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
ILVNAADNKQRDPKM ++V ID E++LIS+ N+G G+PV H+ E +YVP LIFG LLT
Sbjct: 88 ILVNAADNKQRDPKMSCIRVTIDPENNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 147
Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
SSNYDD KK TGGRNGYGAKL NIFST+F +ETA + K +KQ + +NMG+ E +
Sbjct: 148 SSNYDDEEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGEMEL- 206
Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
K G+++T ++F PDL+KF M L+ D+VALM +R D+AG K VKV LNG+++PVK
Sbjct: 207 KPFNGEDYTCITFHPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNKLPVK 265
Query: 266 SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
F YVD+Y K + HE+VN RWE+C+T+SE FQQ+SFVN IAT KGG H
Sbjct: 266 GFRSYVDLYLKDKVDETGNPLKIIHEQVNHRWEVCLTMSEKGFQQISFVNSIATSKGGRH 325
Query: 318 VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
VDYVA+Q+ ++ VV KKNK VKAH VKNH+W+FVNALI+NP FDSQTKE +TL+
Sbjct: 326 VDYVADQIVAKLVDVVKKKNKGGVAVKAHQVKNHMWIFVNALIENPTFDSQTKENMTLQV 385
Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
SFGS C+LSE+F+K GIVE++L+W FK L KK K ++GI KL+DA
Sbjct: 386 KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQVQLNKKCSAVKHNRIKGIPKLDDA 444
Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
N AGGRNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS Q++ N
Sbjct: 445 NDAGGRNSTECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 504
Query: 496 SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
+EI NI KI+GL+ Y +++K+LRYG +MIMTDQ
Sbjct: 505 AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 542
Query: 553 CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
D DGSHIKGLLINFIH WPSLL+ FL EFITPIVK + KN + ++FYS+P+
Sbjct: 543 ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPE 594
Query: 613 YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
+E WK S N W +KYYKGLGTSTSKE KEYF ++ H+ F + +D AI LAF
Sbjct: 595 FEEWKSSTP-NHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAF 653
Query: 673 SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
SKK+I+ RK+WL F P ++L Q Y+ Y+DF+NKELILFS +D +R
Sbjct: 654 SKKQIDDRKEWLTHFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNER 713
Query: 721 SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
SIPSMVDGLKPGQRK+LF FKRN +E KVAQ +G V+E S+YHHGE SL TI+ +AQ
Sbjct: 714 SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 773
Query: 781 DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
+FVGSNN+NLLQP GQFGTR GGKD+AS RYIFT LSP+ R LFP DD L +L +D
Sbjct: 774 NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPPKDDHTLKFLYDDN 833
Query: 841 QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
Q++EP WY+PIIP VL+NG+EGIGTGWS IPN++ R++V N+R L++GE PM P Y+
Sbjct: 834 QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRLLMDGEEPLPMLPSYK 893
Query: 901 GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
F GTIE+ A + Y ++G + +N TT+ I ELPIR WTQ Y+E LE ++ ++
Sbjct: 894 NFKGTIEELAPNQ----YVISGEVAILNSTTIEISELPIRTWTQTYKEQVLEPMLNGTEK 949
Query: 957 NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
I +R+Y DTTV F V ++EE + ++ GL K FKL T+++ ++M LFD G +
Sbjct: 950 TPPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1009
Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
KKYDT IL +FF +RL++Y RK+ L L E KL N+ RFIL ++G+I++ N+
Sbjct: 1010 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGKIIIENKP 1069
Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
+ +L+ L Q+G+ P K + +D +E++++ V + + ++Y
Sbjct: 1070 KKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKEADKSDSVADSGPT--FNY 1127
Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
LL M + LT EK L R++ +E++ L++ +P LW +DL A +L+ ++ + +
Sbjct: 1128 LLDMPLWYLTKEKKDELCKLRNEKEQELETLKRKSPSDLWKEDLAAFIEELEAVEAKEKQ 1187
Query: 1191 AEE 1193
E+
Sbjct: 1188 DEQ 1190
>sp|P41516|TOP2A_RAT DNA topoisomerase 2-alpha OS=Rattus norvegicus GN=Top2a PE=2 SV=1
Length = 1526
Score = 1171 bits (3030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/1203 (51%), Positives = 817/1203 (67%), Gaps = 78/1203 (6%)
Query: 26 TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
++E +YQKK+QLEHILLRPDTYIGS+E TQ +W+Y+E+ + +R +++VPGLYKIFDE
Sbjct: 28 SVERIYQKKTQLEHILLRPDTYIGSVELVTQQMWVYDEDV-GINYREVTFVPGLYKIFDE 86
Query: 86 ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
ILVNAADNKQRDPKM ++V + ++LIS+ N+G G+PV H+ E +YVP LIFG LLT
Sbjct: 87 ILVNAADNKQRDPKMSCIRVTM-MRNNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLT 145
Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
SSNYDD+ KK TGGRNGYGAKL NIFST+F +ETA + K +KQ + +NMG+ + +
Sbjct: 146 SSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETASREYKKMFKQTWMDNMGRAGDMEL- 204
Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
K G+++T ++F+PDL+KF M L+ D+VALM +R D+AG K VKV LNG+R+PVK
Sbjct: 205 KPFSGEDYTCITFQPDLSKFKMQSLDKDIVALMVRRAYDIAGST-KDVKVFLNGNRLPVK 263
Query: 266 SFAEYVDMYPK--------SVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
F YVDMY K ++ HE+VN RWE+C+T+SE FQQ+SFVN IAT KGG H
Sbjct: 264 GFRSYVDMYLKDKVDETGNALKVVHEQVNPRWEVCLTMSEKGFQQISFVNSIATSKGGRH 323
Query: 318 VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
VDYVA+Q+ + ++ VV KKNK VKA VKNH+W+F NA+I+NP FDSQTKE +TL+
Sbjct: 324 VDYVADQIVSKLVDVVKKKNKGGVAVKADQVKNHMWIFGNAVIENPTFDSQTKENMTLQA 383
Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDVRGISKLEDA 435
SFGS C+LSE+F+K GIVE++L+W FK L KK K ++GI KL+DA
Sbjct: 384 KSFGSTCQLSEKFIKAAIG-CGIVESILNWVKFKAQIQLNKKCSAVKHNRIKGIPKLDDA 442
Query: 436 NLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
N AG RNS +CTLILTEGDSAK LA++GL VVGRD++GVFPLRGK+LNVREAS Q++ N
Sbjct: 443 NDAGSRNSAECTLILTEGDSAKTLAVSGLGVVGRDKYGVFPLRGKILNVREASHKQIMEN 502
Query: 496 SEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
+EI NI KI+GL+ Y +++K+LRYG +MIMTDQ
Sbjct: 503 AEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIMIMTDQ---------------------- 540
Query: 553 CFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPD 612
D DGSHIKGLLINFIH WPSLL+ FL EFITPIVK + KN + ++FYS+P+
Sbjct: 541 ------DQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEIAFYSLPE 592
Query: 613 YEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAF 672
+E WK S N W +KYYKGLGTSTSKE KEYF N+ H+ F + +D AI LAF
Sbjct: 593 FEEWK-STNPNHKKWKVKYYKGLGTSTSKEAKEYFANMKRHRIQFKYSGPEDDAAISLAF 651
Query: 673 SKKKIEARKKWLLQFE-----------PGNHL-DQKEKYIKYSDFVNKELILFSMADLQR 720
SKK+++ RK+WL F P ++L Q Y+ Y+DF+NKELILFS +D +R
Sbjct: 652 SKKQVDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTMYLTYNDFINKELILFSNSDNER 711
Query: 721 SIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
SIPSMVDGLKPGQRK+LF FKRN +E KVAQ +G V+E S+YHHGE SL TI+ +AQ
Sbjct: 712 SIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQ 771
Query: 781 DFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDG 840
+FVGSNN+NLLQP GQFGTR GGKD+AS RYIFT LSP+ R LFP DD L +L +D
Sbjct: 772 NFVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSPLARLLFPSKDDHTLRFLYDDN 831
Query: 841 QQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYR 900
Q++EP WY+PIIP VL+NG+EGIGTGWS IPN++ R++V N+RRLL+GE PM P Y+
Sbjct: 832 QRVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREVVNNIRRLLDGEEPLPMLPSYK 891
Query: 901 GFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FLESII---DQ 956
+ GTIE+ AS + Y + G + +N TT+ I ELPIR WTQ Y+E LE ++ ++
Sbjct: 892 NYKGTIEELASNQ----YVINGEVAILNSTTIEITELPIRTWTQTYKEQVLEPMLNGTEK 947
Query: 957 NDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVI 1016
I +R+Y DTTV F + ++EE + ++ GL K FKL T+++ ++M LFD G +
Sbjct: 948 TPPLITDYREYHTDTTVKFVIKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVLFDHVGCL 1007
Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
KKYDT IL +FF +RL++Y RK+ L L E KL N+ RFIL ++G+IV+ N+
Sbjct: 1008 KKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESSKLNNQARFILEKIDGKIVIENKP 1067
Query: 1077 RTDLLLELRQKGFTPFP------KNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDY 1130
+ +L+ L Q+G+ P K E +E+E +P +G ++Y
Sbjct: 1068 KKELIKVLIQRGYDSDPVKAWKEAQQKVPEEEENEENEESESESTSPAAESGPT---FNY 1124
Query: 1131 LLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDAR 1190
LL M + LT EK L RD+ +E++ L+K TP LW +DL A +L+ ++ + +
Sbjct: 1125 LLDMPLWYLTKEKKDELCKQRDEKEQELNTLKKKTPSDLWKEDLAAFVEELEVVEAKEKQ 1184
Query: 1191 AEE 1193
E+
Sbjct: 1185 DEQ 1187
>sp|O16140|TOP2_BOMMO DNA topoisomerase 2 OS=Bombyx mori GN=TOP2 PE=2 SV=1
Length = 1547
Score = 1168 bits (3021), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/1244 (50%), Positives = 820/1244 (65%), Gaps = 107/1244 (8%)
Query: 11 TSNNANVVGPTAPNK----TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESK 66
+S N G AP K IE++YQKKSQLEHILLRPDTYIGS+E+ T+ +W+Y++ +
Sbjct: 12 SSPKQNGTGEPAPAKGQKGAIEKIYQKKSQLEHILLRPDTYIGSVERATETMWVYDKVKE 71
Query: 67 TMIHRTISYVP-----GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGD 121
M+ + ++ VP GLYKI+DEILVNAADNKQRDPKMD +K+ I+QE + ISV+N+G
Sbjct: 72 CMMQKELTSVPDCSFPGLYKIYDEILVNAADNKQRDPKMDVIKIDINQETNTISVYNNGS 131
Query: 122 GVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 181
G+PV +H++E +YVP +IFGHLLTSSNY+D +K TGGRNGYGAKL NIFST+F +ETA
Sbjct: 132 GIPVVMHKDEKMYVPTMIFGHLLTSSNYNDEEEKVTGGRNGYGAKLCNIFSTKFTVETAS 191
Query: 182 GKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKR 241
+ K +KQ + +NM K SEP I + D++TK+ F PDLAKF M LEDD+V LM +R
Sbjct: 192 KQYKKHFKQTWGSNMTKASEPKIKDSGKDDDFTKIVFSPDLAKFKMEKLEDDIVLLMSRR 251
Query: 242 VVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKS--------VTRFHERVNERWEICV 293
D+A + VKV LNG R+ + F +YVD+Y K + +E+V++RWE+ +
Sbjct: 252 AYDVAAS-SQGVKVYLNGERLKINKFKDYVDLYIKGKDDENGQPLKVVYEKVSDRWEVAL 310
Query: 294 TLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLW 352
T+S+ FQQVSFVN IAT KGG HVD VA+ V +V+ V+ KKNK N+K + VK H+W
Sbjct: 311 TISDMGFQQVSFVNSIATTKGGKHVDTVADSVVKNVLEVLKKKNKGGVNIKPYQVKTHMW 370
Query: 353 VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQS 412
+FVN LI NP FDSQTKE +TL+ SFGSKC LSE+F+ VT K G+VE++L+WA FK
Sbjct: 371 LFVNCLIVNPTFDSQTKENMTLQAKSFGSKCNLSEKFITAVT-KCGLVESVLTWAKFKAQ 429
Query: 413 KDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF 472
L K G K ++GI KLEDAN AG +N+ CTLILTEGDSAK LA++GLSVVGRD +
Sbjct: 430 DQLVKASGKKQSKLKGIPKLEDANDAGTKNAHLCTLILTEGDSAKTLAVSGLSVVGRDHY 489
Query: 473 GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNV---KSLRYGHLMIMTD 529
GVFPL GK LNVR+AS QVL N EI N+ KILGL+ +YN+V K+LRYG +MIM D
Sbjct: 490 GVFPLEGKPLNVRDASHKQVLENVEINNLIKILGLQYKKKYNSVDDLKTLRYGKVMIMAD 549
Query: 530 QVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVE 589
Q D DGSHIKGL+INFIH WP LLK+P FL E
Sbjct: 550 Q----------------------------DQDGSHIKGLIINFIHHNWPELLKLP-FLEE 580
Query: 590 FITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
FITPIVKAT K+ K +SFYS+P++E WK+ N +++IKYYKGLGTSTSKE KEYFQN
Sbjct: 581 FITPIVKATKKD-KEISFYSLPEFEEWKKETE-NHHTYNIKYYKGLGTSTSKEAKEYFQN 638
Query: 650 ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQ---------KEKY- 699
+ H+ F + D IELAFSKK + RK+WL NH+D+ E+Y
Sbjct: 639 MDRHRIRFKYSGPTDDHHIELAFSKKGADQRKEWLT-----NHMDEVKRRKEIGLSERYL 693
Query: 700 -------IKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVA 752
+ YSDFVN EL+LFS D RSIPSM+DGLKPGQRK++F KRN +E KVA
Sbjct: 694 YTKETKTVTYSDFVNLELVLFSNGDNVRSIPSMIDGLKPGQRKVIFTCIKRNDKREVKVA 753
Query: 753 QFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARY 812
Q +G V+EHSAYHHGEQSLA TI+ +AQ++VGSNNINLL+P GQFGTR GGKD+AS RY
Sbjct: 754 QLAGSVAEHSAYHHGEQSLAMTIVNLAQNYVGSNNINLLEPRGQFGTRLSGGKDSASPRY 813
Query: 813 IFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIP 872
IFT +SP+TR +F DD LL + ED Q+IEP +Y+PIIP VLVNG EGIGTGWS+ IP
Sbjct: 814 IFTLMSPLTRLIFHPHDDPLLVHEFEDNQKIEPVYYLPIIPMVLVNGVEGIGTGWSTKIP 873
Query: 873 NYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTL 932
NYNPRDI N+RRLL+GE + MHPWY+ F G +E K Y ++G + +
Sbjct: 874 NYNPRDIAENLRRLLDGEKPKVMHPWYKNFKGNVEGFGDK-----YVISGEAAILPGDKI 928
Query: 933 RIKELPIRRWTQDYRE-FLESII--DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQ 989
I ELP+ WT +Y+E LE ++ D+ I +R+Y+ DTTV F V L + +
Sbjct: 929 EITELPVGTWTHNYKENVLEPMLGTDKVKPLISEYREYNTDTTVRFVVSLLPGKLSEIEA 988
Query: 990 EGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLE 1049
EG+ K FKL TTIS + M+ FD ++KYD E+IL EF+ +R+++Y +RK L+
Sbjct: 989 EGIHKVFKLQTTISMTCMNAFDYNCCLEKYDKVEEILREFYDLRVKYYVRRKDYLEGQLQ 1048
Query: 1050 LELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP-----KNSKSIEAVVA 1104
E KL N+ RFIL + +V+ N+KR ++ EL ++G+ P P K + I+ + A
Sbjct: 1049 AEADKLSNQARFILKKCDKGLVIENKKRKAMVEELIKRGYAPDPIADWKKRASKIQGLTA 1108
Query: 1105 GATDETEESEE------------NPEVVNGVQSI----DYDYLLSMAIGTLTLEKVQGLL 1148
D+ +ESEE +P+ Q + ++YLL M++ LT EK LL
Sbjct: 1109 LEDDDAQESEEEEPEPDPKGKPVDPD--KAFQQLKEVKKFNYLLGMSMWMLTKEKKDELL 1166
Query: 1149 ADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAE 1192
RD+ E+ L+ T LW +DLDA ++LDE++ + R E
Sbjct: 1167 KQRDQKLTELTTLKNKTAPMLWREDLDAFLIKLDEVEDKERREE 1210
>sp|P15348|TOP2_DROME DNA topoisomerase 2 OS=Drosophila melanogaster GN=Top2 PE=1 SV=1
Length = 1447
Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/1212 (49%), Positives = 814/1212 (67%), Gaps = 98/1212 (8%)
Query: 26 TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
+IE+MYQKKSQLEHILLRPD+YIGS+E + +W+Y+ M+ + IS+VPGLYKIFDE
Sbjct: 9 SIEQMYQKKSQLEHILLRPDSYIGSVEFTKELMWVYDNSQNRMVQKEISFVPGLYKIFDE 68
Query: 86 ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
ILVNAADNKQRD M+ +K+ ID E +++SV N+G G+PV +H+E+ +YVP +IFGHLLT
Sbjct: 69 ILVNAADNKQRDKSMNTIKIDIDPERNMVSVWNNGQGIPVTMHKEQKMYVPTMIFGHLLT 128
Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
SSNY+D+ KK TGGRNGYGAKL NIFST F +ETA + K +KQ + NNMGK S+ I
Sbjct: 129 SSNYNDDEKKVTGGRNGYGAKLCNIFSTSFTVETATREYKKSFKQTWGNNMGKASDVQI- 187
Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
K G ++T+++F PDLAKF M L++D+VALM +R D+A K V V LNG+++ V+
Sbjct: 188 KDFNGTDYTRITFSPDLAKFKMDRLDEDIVALMSRRAYDVAAS-SKGVSVFLNGNKLGVR 246
Query: 266 SFAEYVDMYPKS--------VTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTH 317
+F +Y+D++ K+ + HE NERWE+ S+ FQQVSFVN IAT KGG H
Sbjct: 247 NFKDYIDLHIKNTDDDSGPPIKIVHEVANERWEVACCPSDRGFQQVSFVNSIATYKGGRH 306
Query: 318 VDYVANQVANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
VD+V + + ++ V+ KKNK N+K V+NHLWVFVN LI+NP FDSQTKE +TL+Q
Sbjct: 307 VDHVVDNLIKQLLEVLKKKNKGGINIKPFQVRNHLWVFVNCLIENPTFDSQTKENMTLQQ 366
Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
FGSKC LSE+F+ ++ KSGIVE++L+WA FK D+ K G K+ ++GI KLEDAN
Sbjct: 367 KGFGSKCTLSEKFINNMS-KSGIVESVLAWAKFKAQNDIAKTGGRKSSKIKGIPKLEDAN 425
Query: 437 LAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNS 496
AGG+NS +CTLILTEGDSAK+LA++GL V+GRD +GVFPLRGKLLNVREA+ Q+ N+
Sbjct: 426 EAGGKNSIKCTLILTEGDSAKSLAVSGLGVIGRDLYGVFPLRGKLLNVREANFKQLSENA 485
Query: 497 EIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
EI N+ KI+GL+ +Y +++K+LRYG +MIMTDQ
Sbjct: 486 EINNLCKIIGLQYKKKYLTEDDLKTLRYGKVMIMTDQ----------------------- 522
Query: 554 FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
D DGSHIKGLLINFIH+ WP LL++P FL EFITPIVKAT KN + LSFYS+P++
Sbjct: 523 -----DQDGSHIKGLLINFIHTNWPELLRLP-FLEEFITPIVKATKKNEE-LSFYSLPEF 575
Query: 614 EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
E WK N +++IKYYKGLGTSTSKE KEYFQ++ H+ F ++ D E+I +AFS
Sbjct: 576 EEWKNDTA-NHHTYNIKYYKGLGTSTSKEAKEYFQDMDRHRILFKYDGSVDDESIVMAFS 634
Query: 674 KKKIEARKKWLLQFEPGNHLDQ---------KEKY--------IKYSDFVNKELILFSMA 716
KK IE+RK WL NH+D+ E+Y I Y+DF+N EL+LFS A
Sbjct: 635 KKHIESRKVWLT-----NHMDEVKRRKELGLPERYLYTKGTKSITYADFINLELVLFSNA 689
Query: 717 DLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTIL 776
D +RSIPS+VDGLKPGQRK++F FKRN +E KVAQ SG V+E SAYHHGE SL TI+
Sbjct: 690 DNERSIPSLVDGLKPGQRKVMFTCFKRNDKREVKVAQLSGSVAEMSAYHHGEVSLQMTIV 749
Query: 777 GMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYL 836
+AQ+FVG+NNINLL+P GQFGTR GGKD ASARYIFT +SP+TR ++ DD LLDY
Sbjct: 750 NLAQNFVGANNINLLEPRGQFGTRLSGGKDCASARYIFTIMSPLTRLIYHPLDDPLLDYQ 809
Query: 837 NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMH 896
+DGQ+IEP WY+PIIP VLVNG+EGIGTGWS+ I NYNPR+I+ N+R+++NG+ MH
Sbjct: 810 VDDGQKIEPLWYLPIIPMVLVNGAEGIGTGWSTKISNYNPREIMKNLRKMINGQEPSVMH 869
Query: 897 PWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ 956
PWY+ F G +E + Y TG I+ ++ L I ELP+ WTQ+Y+E + +
Sbjct: 870 PWYKNFLGRMEYVSDGR----YIQTGNIQILSGNRLEISELPVGVWTQNYKENVLEPLSN 925
Query: 957 NDSFIRG----FRQYSDDTTVDFEVFLSEESMMRTKQE--GLLKKFKLTTTISTSNMHLF 1010
++G +R+Y DTTV F + + R E G + FKLTTT+ST+ MH F
Sbjct: 926 GTEKVKGIISEYREYHTDTTVRFVISFAPGEFERIHAEEGGFYRVFKLTTTLSTNQMHAF 985
Query: 1011 DSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEI 1070
D ++++ T IL+E++ +R E+Y +R+ + L + +L ++ RFIL ++
Sbjct: 986 DQNNCLRRFPTAIDILKEYYKLRREYYARRRDFLVGQLTAQADRLSDQARFILEKCEKKL 1045
Query: 1071 VVNNRKRTDLLLELRQKGFTPFP------------------KNSKSIEAVVAGATDETEE 1112
VV N++R + EL ++G+ P P ++ + EA + ++ +E
Sbjct: 1046 VVENKQRKAMCDELLKRGYRPDPVKEWQRRIKMEDAEQADEEDEEEEEAAPSVSSKAKKE 1105
Query: 1113 SEENPE-VVNGVQSI-DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLW 1170
E +PE + + +DYLL M++ LT EK LL RD E++ LRK TPE LW
Sbjct: 1106 KEVDPEKAFKKLTDVKKFDYLLGMSMWMLTEEKKNELLKQRDTKLSELESLRKKTPEMLW 1165
Query: 1171 VKDLDALDMQLD 1182
+ DLDAL+ +L+
Sbjct: 1166 LDDLDALESKLN 1177
>sp|Q55BP5|TOP2_DICDI Probable DNA topoisomerase 2 OS=Dictyostelium discoideum GN=top2 PE=3
SV=1
Length = 1521
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/1261 (48%), Positives = 825/1261 (65%), Gaps = 111/1261 (8%)
Query: 16 NVVGPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISY 75
N+ K+IEE+YQKK L+ ILLRPDTYIGS E+ + LW++E+ K M+HR +S+
Sbjct: 92 NIASSAKKGKSIEEIYQKKELLDQILLRPDTYIGSTERQEEELWVWED--KRMVHRKVSF 149
Query: 76 VPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYV 135
VPG+YKIFDEILVNAADNKQR+ M +KVVID+E ISV N G G+P+++H E +Y+
Sbjct: 150 VPGIYKIFDEILVNAADNKQREGNMKFIKVVIDREKGFISVTNDGAGIPIQVHSEHKIYI 209
Query: 136 PELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNN 195
PELIFG+LLTSS+YDD+ K+ TGGRNG+GAKL NIFST+FI+E AD K K YKQ FTNN
Sbjct: 210 PELIFGNLLTSSHYDDSEKRLTGGRNGFGAKLANIFSTKFIVECADSKSKKLYKQTFTNN 269
Query: 196 MGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKV 255
M K +P I+ + ++TK++F P+L +F M +DD+VAL+ KRV D+AGC ++KV
Sbjct: 270 MRSKEDPKITSYQNKTDYTKITFYPELDRFGMVEFDDDLVALLSKRVYDIAGC-NPTLKV 328
Query: 256 ELNGHRVPVKSFAEYVDMY-------PKSVTRFHERVNERWEICVTLS-EGQFQQVSFVN 307
LN + ++SF +Y+++Y PK ++E+V++RWE+ VTLS E QF QVSFVN
Sbjct: 329 SLNDEELGIRSFEKYINLYFPDEENAPKV---YYEKVSDRWELAVTLSKESQFNQVSFVN 385
Query: 308 GIATIKGGTHVDYVANQVANHVMAVVNKKNK-NANVKAHNVKNHLWVFVNALIDNPAFDS 366
I T+KGGTHV + + + + VNKKNK +A++K +KNHL VFVN LI+NP FDS
Sbjct: 386 SICTVKGGTHVTHALSNIVTAIQEQVNKKNKGSADIKPAFIKNHLSVFVNCLIENPHFDS 445
Query: 367 QTKETLTLRQSSFGSKCELSEEFLKKVT-AKSGIVETLLSWANFKQSKDLKKN--DGTKT 423
QTKETLT + SSFGS+CE SE+F+K+V +KSGIV ++L +A FK LK++ G K
Sbjct: 446 QTKETLTSKISSFGSRCEPSEKFIKRVLDSKSGIVASILEFAQFKDQSALKRSTSSGGKK 505
Query: 424 EDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLN 483
V I KL+DANLAGG SE CTLILTEGDSAK+LA AG+SVVG+D +G FPL+GKLLN
Sbjct: 506 GKV-SIPKLDDANLAGGTKSEDCTLILTEGDSAKSLATAGISVVGKDHYGAFPLKGKLLN 564
Query: 484 VREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFI 543
VR+ S+ +V+NN EI NI ILGLK G Y + LRYGHLMIMTDQ
Sbjct: 565 VRDQST-KVINNDEINNIVTILGLKYGKVYETLSDLRYGHLMIMTDQ------------- 610
Query: 544 LIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK 603
DHDGSHIKGL+IN +H FWP+LL++P FLVEFITPIVK N K
Sbjct: 611 ---------------DHDGSHIKGLIINMVHHFWPTLLRMPGFLVEFITPIVKVFKNNQK 655
Query: 604 VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
+SFY+MP++ W+E+ N W +KYYKGLGTST EGKEYF ++ HK DF W D+
Sbjct: 656 PISFYTMPEFLKWRET---NDKGWDVKYYKGLGTSTPGEGKEYFSDLERHKIDFEW-DEG 711
Query: 664 DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQ-KEKYIKYSDFVNKELILFSMADLQRSI 722
+ IELAFSK + + RKKW+ + G L+Q K + YSDF+NKEL+LFS+AD +RSI
Sbjct: 712 ANDNIELAFSKSRADDRKKWMAEHIEGTFLEQFGVKKLTYSDFINKELVLFSIADCERSI 771
Query: 723 PSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDF 782
P++VDGLK RK L+ FKRN KE KVAQ GYVSEHSAYHHGE SL STI+GMAQ+F
Sbjct: 772 PNIVDGLKTSHRKTLYSCFKRNLKKEIKVAQLIGYVSEHSAYHHGEASLYSTIVGMAQEF 831
Query: 783 VGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQ 842
VGSNNINLL P G +GTR GGKD +SARYI TRL+ I R ++ DDD +L + +DG++
Sbjct: 832 VGSNNINLLNPAGSYGTRIAGGKDCSSARYIHTRLNDIARAVYHADDDPILSCVVDDGKK 891
Query: 843 IEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGF 902
++P +Y+P+IP +LVNG GIGTGWSS IPNYNPRD++ N+R ++G+ ++P+ PWYRGF
Sbjct: 892 VQPKFYIPVIPMILVNGCVGIGTGWSSTIPNYNPRDLIQNMRLAIDGKPLKPIKPWYRGF 951
Query: 903 GGTIEKT-ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI-------- 953
G+IE SK G Y GI +++++ I ELPI WTQDYRE L+ +
Sbjct: 952 LGSIEANQGSKVQGGQYLSKGIWKKLSDNRFEITELPIGFWTQDYRELLDELETPGTRKK 1011
Query: 954 ---------------------------IDQND-------SFIRGFRQYSDDTTVDFEVFL 979
+D +D + ++ + YS ++T+ F +
Sbjct: 1012 KKEEKEKKAASRKGTKAKPTTTKRSKRVDDDDDNEKVTEATVKSYTNYSSESTIHFII-- 1069
Query: 980 SEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEK 1039
+++ + + K FKL +TI+ +NM +FD +G I+++ T + E FF +R++ Y+
Sbjct: 1070 --DTIQPVDEINIEKVFKLVSTINETNMVVFDEEGRIQRFATTTALQEHFFPLRIKHYQM 1127
Query: 1040 RKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTP-FPKNS-K 1097
RK E L E +L NK RFIL VVN E+V++N K+ DL+ +L++ F KNS K
Sbjct: 1128 RKDFLSERLSEEYSRLSNKARFILAVVNKELVISNVKKVDLINKLKEMKFDRIINKNSNK 1187
Query: 1098 SIEAVV---AGATDETEESEENPEVVNGVQ------SIDYDYLLSMAIGTLTLEKVQGLL 1148
S + A DE + + + E +G Q + YDYLLS+ + +LTLE+V+ L+
Sbjct: 1188 SARDKIKKKKNAFDEEDAAISSDEEKDGAQEEQDDDTKGYDYLLSLPLWSLTLERVKKLI 1247
Query: 1149 ADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGP 1208
+RD +E D L + ++ +DLDAL+ LD+ D D + + +K A P
Sbjct: 1248 EERDSKKKEWDILLSTPIQEIYKRDLDALEKALDDQDAYDESLKNQTESLKKRTKTKALP 1307
Query: 1209 K 1209
+
Sbjct: 1308 R 1308
>sp|Q9Y8G8|TOP2_PENCH DNA topoisomerase 2 OS=Penicillium chrysogenum GN=TOP2 PE=3 SV=1
Length = 1587
Score = 1149 bits (2972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/1171 (50%), Positives = 788/1171 (67%), Gaps = 65/1171 (5%)
Query: 27 IEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEI 86
+ E YQK +QLEHI+ RPDTY+GS E+ TQ +W+Y ES+ M +R +SYVPGLYKIFDEI
Sbjct: 64 VSEKYQKLTQLEHIIKRPDTYVGSTERTTQHMWVYSSESEGMEYREVSYVPGLYKIFDEI 123
Query: 87 LVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTS 146
+VNAADNKQ D MD ++V ID+E ISV N+G G+P+E+H +E +YVPELIFGHLLTS
Sbjct: 124 VVNAADNKQNDKNMDEIRVTIDRESGEISVWNNGRGIPIEMHSKEKMYVPELIFGHLLTS 183
Query: 147 SNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISK 206
SNYDD K TGGRNG+GAKL N+FSTEF IET D ++ KKYKQ +T NM K + I+
Sbjct: 184 SNYDDTQMKVTGGRNGFGAKLCNVFSTEFTIETQDSRQKKKYKQTWTENMTKMGKAKITD 243
Query: 207 CKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
K G ++TKV+FKPD AKF MT ++DD AL+K+RV DLAG V V+LNG R+P+++
Sbjct: 244 AK-GADYTKVTFKPDYAKFGMTGMDDDFEALVKRRVYDLAGTA--KVAVKLNGSRIPIRN 300
Query: 267 FAEYVDMYPKSVTRFHER---------------VNERWEICVTLSEGQFQQVSFVNGIAT 311
F Y++MY K++ R ER + RWE+ +S+G FQQVSFVN IA
Sbjct: 301 FKMYMEMYTKAIRR--ERGDMGPAGKNEIITCSPDPRWEVGFAVSDGAFQQVSFVNSIAI 358
Query: 312 IKGGTHVDYVANQVANHVMAVVNKKNKN-ANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
GGTHV+Y+A+Q+ + + V KKNKN A +K ++NH+++FVNALI NPAF SQTKE
Sbjct: 359 TSGGTHVNYIADQICSKLAEQVKKKNKNGATLKPAQIRNHIFIFVNALIVNPAFTSQTKE 418
Query: 371 TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGIS 430
LT +QS FGSKC L E+F KK+ K+ ++ +L +A K + LKK DG + +
Sbjct: 419 QLTTKQSQFGSKCVLEEDFYKKIL-KTEVMTNILHFAQQKADQMLKKTDGGRRSRMNN-P 476
Query: 431 KLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSN 490
KL DAN AG + CTLILTEGDSAK LAMAG +VVG D FGVFPLRGKLLNVR+AS +
Sbjct: 477 KLTDANKAGTKEGHHCTLILTEGDSAKGLAMAGRAVVGPDLFGVFPLRGKLLNVRDASFD 536
Query: 491 QVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWIT 550
Q+ N EI NIK +GL+ EY + + LRYGHLMI TDQ
Sbjct: 537 QIAKNQEIQNIKNFIGLQHKKEYTDTRGLRYGHLMITTDQ-------------------- 576
Query: 551 TFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN----GKVLS 606
DHDGSHIKGLLINF+ + +PSLLKIP FL+EFITPIVK + K S
Sbjct: 577 --------DHDGSHIKGLLINFLQAQFPSLLKIPEFLIEFITPIVKVWKGDPKNPTKQRS 628
Query: 607 FYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGE 666
F++MP+YEAWKE G+ W KYYKGLGTST+++ + YF+++ H K+F D + E
Sbjct: 629 FFTMPEYEAWKEE-HGHERGWEHKYYKGLGTSTTEDAQIYFRDLDRHLKEFHTMQDNEVE 687
Query: 667 AIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
IELAFSKKK + RK + QF PG LD I Y+DF+NKELILFSMAD RSIPS+V
Sbjct: 688 LIELAFSKKKADERKGNVRQFRPGTFLDHSVDKITYTDFINKELILFSMADNIRSIPSVV 747
Query: 727 DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
DGLKPGQRK+L+ F+RN K+ KV + +G+VS +AY HGE SL TI+G+AQ FVGSN
Sbjct: 748 DGLKPGQRKVLYTCFRRNLKKDMKVVELAGHVSGTTAYQHGEGSLQQTIVGLAQTFVGSN 807
Query: 787 NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
N+N L+P+G FG+R QGG D ASARYI+TRL P R +F DD LL Y +DG +IE
Sbjct: 808 NVNCLEPSGNFGSRLQGGADCASARYIYTRLWPFARRVFHNHDDPLLTYNEDDGAKIEQE 867
Query: 847 WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTI 906
Y+P++P +L+NG++GIGTGWSS PNYNP DIV N++R+++GE ++PM PW+RGF G +
Sbjct: 868 VYVPVVPMILINGADGIGTGWSSSTPNYNPEDIVENLKRMMDGEPLKPMQPWFRGFTGEV 927
Query: 907 EKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQNDSFIRGF 964
+ +GII+E + + I ELPIR WTQD+++ LE II ++ SFI+ +
Sbjct: 928 TAVGQDR----FKFSGIIKETGDKEVEITELPIRTWTQDFKDKLEDIIKAEKTPSFIKDY 983
Query: 965 RQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQ 1024
+ Y+ T V F + + E+ M EGL +KFKL+ T++T+N+ FD + I KY + E
Sbjct: 984 KDYNTHTKVHFVIQMDEKHMKTAIAEGLEEKFKLSKTMTTTNLVAFDPE-RITKYASVED 1042
Query: 1025 ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
I++EF+ +RL++YE+RK+ QL ++ EL KL N+ RF+ +++G++V++ +K+ L+ EL
Sbjct: 1043 IMKEFYAVRLKYYERRKQYQLSEMQKELDKLSNQARFVQMIIDGKLVISKKKKAVLVAEL 1102
Query: 1085 RQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKV 1144
++K F PFPK ++++A E EE E V S YDYLL M I +LT E+V
Sbjct: 1103 KEKDFKPFPKVKEAVKAGETEPVVEEEEDSE--SGDTEVLSNSYDYLLGMPIWSLTQERV 1160
Query: 1145 QGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
+ L E+D L K + E +W +DL+
Sbjct: 1161 EKLRRQIGDKELEIDTLIKLSKEDIWKRDLE 1191
>sp|Q23670|TOP2_CAEEL Probable DNA topoisomerase 2 OS=Caenorhabditis elegans GN=K12D12.1
PE=3 SV=2
Length = 1520
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/1220 (49%), Positives = 808/1220 (66%), Gaps = 90/1220 (7%)
Query: 19 GPTAPNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQ--ALWIYEEESKTMIHRTISYV 76
G + IE++YQKKSQLEHILLRPDTYIGS+E HT+ +W+Y E + R ISYV
Sbjct: 55 GGGSKQMAIEDIYQKKSQLEHILLRPDTYIGSVE-HTEKTPMWVYNMEESKLEQRDISYV 113
Query: 77 PGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVP 136
PGLYKI+DEILVNAADNKQRDPKM+ +K+ I++E + ISV+N+G G+PV H+ E VYVP
Sbjct: 114 PGLYKIYDEILVNAADNKQRDPKMNTIKITINKEKNEISVYNNGKGIPVTQHKVEKVYVP 173
Query: 137 ELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
ELIFG LLTSSNY+D+ KK TGGRNGYGAKL NIFST+F +ET+ +KQ + NM
Sbjct: 174 ELIFGTLLTSSNYNDDEKKVTGGRNGYGAKLCNIFSTKFTLETSSRDYKSAFKQTWIKNM 233
Query: 197 GKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVE 256
+ EP I K + D +TK++F PDLAKF M L+DD+ LM +R D+AG K V V
Sbjct: 234 TRDEEPKIVKSTDED-FTKITFSPDLAKFKMKELDDDICHLMARRAYDVAGS-SKGVAVF 291
Query: 257 LNGHRVPVKSFAEYVDMYPKSVTR-------FHERVNERWEICVTLSEGQFQQVSFVNGI 309
LNG R+P+K F +YV MY +E+V +RW++ + LSE FQQVSFVN I
Sbjct: 292 LNGKRIPIKGFEDYVQMYTSQFNNEGEPLKIAYEQVGDRWQVALALSEKGFQQVSFVNSI 351
Query: 310 ATIKGGTHVDYVANQ-VANHVMAVVNKKNKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQ 367
AT KGG HVDYVA+Q VA + ++ K K + N+K +KNH+WVFVN LI+NP FDSQ
Sbjct: 352 ATTKGGRHVDYVADQMVAKFIDSIKRKLTKTSMNIKPFQIKNHMWVFVNCLIENPTFDSQ 411
Query: 368 TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDL-KKNDGTKTEDV 426
TKET+TL+Q FGS C LSE+F K + GI + ++SW FKQ DL KK TKT +
Sbjct: 412 TKETMTLQQKQFGSTCVLSEKF-SKAASSVGITDAVMSWVRFKQMDDLNKKCSKTKTSKL 470
Query: 427 RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
+GI KLEDAN AG +NS+QCTLILTEGDSAK LA++GLSVVGRD++GVFPLRGKLLNVRE
Sbjct: 471 KGIPKLEDANDAGTKNSQQCTLILTEGDSAKTLAVSGLSVVGRDKYGVFPLRGKLLNVRE 530
Query: 487 ASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTDQVLLAPLSFLLWFI 543
+ Q+ +N+E+ + KILGL+ +Y ++ K+LRYG LM+M DQ
Sbjct: 531 GNMKQIADNAEVNAMIKILGLQYKKKYETEDDFKTLRYGKLMVMADQ------------- 577
Query: 544 LIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGK 603
D DGSHIKGL+INFIH FWPSL++ +F+ EFITPIVKAT K +
Sbjct: 578 ---------------DQDGSHIKGLVINFIHHFWPSLIQ-RNFVEEFITPIVKAT-KGKE 620
Query: 604 VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
+SFYS+P+Y W+ + N S+ IKYYKGLGTSTSKE KEYF ++ H+ F +
Sbjct: 621 EVSFYSLPEYSEWRMNTD-NWKSYKIKYYKGLGTSTSKEAKEYFLDMVRHRIRFKYNGAD 679
Query: 664 DGEAIELAFSKKKIEARKKWLLQF--------EPG---NHLDQKE-KYIKYSDFVNKELI 711
D A+++AFSKKKIE RK WL ++ + G +L K+ +++ + DFVN+EL+
Sbjct: 680 DDNAVDMAFSKKKIEERKDWLSKWMREKKDRKQQGLAEEYLYNKDTRFVTFKDFVNRELV 739
Query: 712 LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSL 771
LFS D +RSIP +VDG KPGQRK+LF FKR +E KVAQ +G V+E SAYHHGEQSL
Sbjct: 740 LFSNLDNERSIPCLVDGFKPGQRKVLFACFKRADKREVKVAQLAGAVAEISAYHHGEQSL 799
Query: 772 ASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDK 831
TI+ +AQD+VGSNNINLL P GQFGTR QGGKD+ASARYIFT+LSP+TR LFP DD
Sbjct: 800 MGTIVNLAQDYVGSNNINLLLPIGQFGTRLQGGKDSASARYIFTQLSPVTRTLFPAHDDN 859
Query: 832 LLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEM 891
+L +L E+ Q+IEP WY PIIP VLVNG++GIGTGWS+ IPNYNPR++V N++RL+ GE
Sbjct: 860 VLRFLYEENQRIEPEWYCPIIPMVLVNGAQGIGTGWSTNIPNYNPRELVKNIKRLIAGEP 919
Query: 892 MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYRE-FL 950
+ + PWY+ F G I + + G + +++ T+ I ELPI++WTQDY+E L
Sbjct: 920 QKALAPWYKNFRGKIIQIDPSR----FACYGEVAVLDDNTIEITELPIKQWTQDYKEKVL 975
Query: 951 ESIIDQNDS---FIRGFRQYSDDTTVDFEVFLSEESMMRTKQ-EGLLKKFKLTTTISTSN 1006
E +++ +D I +++Y DTTV F V LS + ++ + L + FKL I+T+
Sbjct: 976 EGLMESSDKKSPVIVDYKEYHTDTTVKFVVKLSPGKLRELERGQDLHQVFKLQAVINTTC 1035
Query: 1007 MHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVV 1066
M LFD+ G ++ Y +PE I +EF+ R E Y +RK+ L L+ + +L N+ RFIL +
Sbjct: 1036 MVLFDAAGCLRTYTSPEAITQEFYDSRQEKYVQRKEYLLGVLQAQSKRLTNQARFILAKI 1095
Query: 1067 NGEIVVNNRKRTDLLLELRQKGFTPFP----KNSKSIEAVVAGATDETEES-------EE 1115
N EIV+ N+K+ ++ L + F P K + ++ + E +E EE
Sbjct: 1096 NNEIVLENKKKAAIVDVLIKMKFDADPVKKWKEEQKLKELRESGEIELDEDDLAAVAVEE 1155
Query: 1116 NPEVVNGVQSI-----DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLW 1170
+ + + +++ DYDYL+ MA+ L+ E+ L+ + ++ EV + K T + LW
Sbjct: 1156 DEAISSAAKAVETKLSDYDYLVGMALIKLSEEEKNKLIKESEEKMAEVRVIEKKTWQDLW 1215
Query: 1171 VKDLDALDMQLDELDKSDAR 1190
+DLD + ELDK +AR
Sbjct: 1216 HEDLDNF---VSELDKQEAR 1232
>sp|Q01879|TOP2_PICGU DNA topoisomerase 2 OS=Meyerozyma guilliermondii (strain ATCC 6260 /
CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)
GN=TOP2 PE=3 SV=3
Length = 1400
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 600/1329 (45%), Positives = 838/1329 (63%), Gaps = 119/1329 (8%)
Query: 6 RLPLTTSNNANVVGPTAP-NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEE 64
++PL S N P+AP + YQK SQLEHIL RPDTYIGS+EK +W ++
Sbjct: 34 KVPLRDSTNT-TAQPSAPATGDASDQYQKLSQLEHILKRPDTYIGSVEKTGVEMWSFDAA 92
Query: 65 SKTMIHRTISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
+++MI++ + VPGLYKIFDEILVNAADNK RDP M +KV ID E++ ISV N G G+P
Sbjct: 93 TESMIYKEVHIVPGLYKIFDEILVNAADNKIRDPSMRNIKVNIDAENNTISVMNDGKGIP 152
Query: 125 VEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKR 184
+EIH++E +Y+PELIFG+LLTSSNYDD+ KK TGGRNGYGAKL NIFSTEF++ETAD
Sbjct: 153 IEIHKKEKIYIPELIFGNLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFVLETADLNT 212
Query: 185 LKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVD 244
+ YKQ +TNNM ++P I+K K +TKV+FKPDL+KF+M L+DD+++++++RV D
Sbjct: 213 SQVYKQTWTNNMANLTKPKITKLKSKKEYTKVTFKPDLSKFHMEMLDDDILSVLRRRVYD 272
Query: 245 LAGCLGKSVKVELNGHRVPVKSFAEYVDMY-------------PKSVTR-----FHERVN 286
L G + K + LN ++ +++F YV+MY P+ TR HE N
Sbjct: 273 LCGTV-KDCNIYLNDKKLSIRNFKSYVEMYVNAIRERSPDPVAPEGETRNYSTIVHEVFN 331
Query: 287 ERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNA---NVK 343
+RWE+ +S+G F QVSFVN IAT GGTHV YV++Q+ ++ + KK K N+K
Sbjct: 332 DRWEVAFAVSDGSFNQVSFVNSIATTSGGTHVKYVSDQIITKLIDALTKKEKGKKKLNIK 391
Query: 344 AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE----LSEEFLKKVTAKSGI 399
V+N+++VF+N LI+NPAF SQTKE LT R + FG K +S++F+ K+ K+ I
Sbjct: 392 PQEVRNNMFVFINCLIENPAFTSQTKEQLTTRVAQFGGKPSEKIVISDQFIAKI-LKTSI 450
Query: 400 VETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKAL 459
+ + + N + K++ K DG++ ++ KL DAN AG + +CTLILTEGDSA L
Sbjct: 451 ADKIRTIVNANEDKEMSKADGSRKSRIKNQVKLVDANKAGTKEGYKCTLILTEGDSAMPL 510
Query: 460 AMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN--NVK 517
A+AGL+VVGRD +G FPLRGKLLNVREAS QV N+EI +IK+I+GL+ Y N+K
Sbjct: 511 AVAGLTVVGRDYYGCFPLRGKLLNVREASIEQVSKNAEINSIKQIMGLQHKKRYTPENIK 570
Query: 518 SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFW 577
SLRYGH+MIMTD QD DGSHIKGL+INF+ + +
Sbjct: 571 SLRYGHIMIMTD----------------------------QDQDGSHIKGLIINFLETSF 602
Query: 578 PSLLKIPSFLVEFITPIVKAT---NKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKG 634
P LL+IP FL+EFITPIVK T N +V+ FY+MP++E W+E+ G W KY+KG
Sbjct: 603 PGLLEIPGFLLEFITPIVKVTITGRGNHRVIPFYNMPEFEKWRET-EGTTCKWKHKYFKG 661
Query: 635 LGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLD 694
LGTS EG+EYF + H K F D D + I++AFSKKK + RK WL F PG HLD
Sbjct: 662 LGTSLESEGREYFAALDRHMKSFHALQDGDSQYIDMAFSKKKADERKDWLQAFRPGTHLD 721
Query: 695 QKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQF 754
+ + I S+F+NKELILFSMAD RSIPS++DG KPGQRK+L+ FKRN E KVAQ
Sbjct: 722 PQIREIPISEFINKELILFSMADNVRSIPSILDGFKPGQRKVLYGCFKRNLRSEIKVAQL 781
Query: 755 SGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIF 814
GY+SEH+ YHHGE SLA TI+G+AQ+FVG+NN+NLLQP G FG+R GGKD ++ RYI
Sbjct: 782 VGYISEHTGYHHGEGSLAQTIVGLAQNFVGANNLNLLQPIGLFGSRAAGGKDFSAVRYIH 841
Query: 815 TRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNY 874
T ++ +TR +F DD L Y+ +D Q +EP Y+PIIP +LVNG+EGIGTGWS+ IP++
Sbjct: 842 TNITDLTRVIFNPLDDDLYTYVQDDAQTVEPEAYLPIIPMLLVNGAEGIGTGWSTNIPSF 901
Query: 875 NPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRI 934
NP DIVAN+RR++NGE M PW++G+ G +E+ + ++ Y V+G IE+V++ T+ I
Sbjct: 902 NPVDIVANIRRMMNGEEPVDMTPWFKGWEGDLERISPEK----YKVSGKIEQVDDDTVEI 957
Query: 935 KELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLK 994
E+PI+ WT +EFL + + + +I+ + + F V LS+E M ++ + GLL+
Sbjct: 958 TEIPIKTWTNSVKEFLLAGLGNDKPWIKDMEE-QHGINIRFVVRLSKEEMDKSLRMGLLE 1016
Query: 995 KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
+FKL ++IS SNM FD +G IKKY + +IL++++ RLE Y++RK + EN + +L +
Sbjct: 1017 RFKLISSISLSNMVAFDPQGRIKKYSSANEILKDYYWARLELYQRRKDMMAENFQNQLTR 1076
Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSI--EAVVA-------- 1104
L + RFI ++ ++ + N+KR++++ +L++ FT F KN K + E +V
Sbjct: 1077 LSEQARFIKLIIEKKLTIANKKRSEMVDDLKKLKFTRFNKNGKPVHDEPLVEAEELAEEE 1136
Query: 1105 ------------GATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRD 1152
G +ES+ PE YDYLL MAI +LT E+ + LL RD
Sbjct: 1137 EEAAGDISQLNLGLVAPEDESQYKPETTYS----QYDYLLGMAIWSLTRERYEKLLRQRD 1192
Query: 1153 KLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVA 1212
+ EE+++L K + + LW DLD + +E ++D A GP
Sbjct: 1193 EKQEELNELLKKSAKDLWNSDLDDFLVGWEEFLRADIEAR-----------NSFGPT--- 1238
Query: 1213 KRAPKNARKNDKKSNNARATEAMGEMDNVTKVVKPKGRAGLKKA---PAEKLDDDEEDEV 1269
A + RK +KS + + TK PK KA PA+ + +E ++
Sbjct: 1239 --AKTSTRKRARKSTKSEPAQKK------TKSSTPKASTPTIKAEATPAQPVVKEETNKQ 1290
Query: 1270 PDLKQRLAK 1278
PDL +K
Sbjct: 1291 PDLLSFFSK 1299
>sp|O93794|TOP2_CANGA DNA topoisomerase 2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 /
JCM 3761 / NBRC 0622 / NRRL Y-65) GN=TOP2 PE=3 SV=2
Length = 1406
Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 577/1209 (47%), Positives = 793/1209 (65%), Gaps = 85/1209 (7%)
Query: 25 KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFD 84
KT E YQK SQLEHIL RPDTYIGS+E Q WIY+EE+ MI +T++ VPGL+KIFD
Sbjct: 5 KTASERYQKISQLEHILKRPDTYIGSVEIQEQEQWIYDEETDCMIDKTVNIVPGLFKIFD 64
Query: 85 EILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLL 144
EILVNAADNK RDP M + V I+ E + I V N G G+P+EIH++E +Y+PELIFGHLL
Sbjct: 65 EILVNAADNKVRDPSMKRIDVTINPEENFIEVRNDGKGIPIEIHEKEKIYIPELIFGHLL 124
Query: 145 TSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNI 204
TSSNYDD+ KK TGGRNGYGAKL NIFSTEF +ETAD K +KY Q + NNM P I
Sbjct: 125 TSSNYDDDEKKVTGGRNGYGAKLCNIFSTEFTLETADPKNGRKYVQTWENNMNVCHPPKI 184
Query: 205 SKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
+ K+G ++TKV+FKPDL++F M L+ D++ +M++RV D+ G + + V V LNG + +
Sbjct: 185 TSYKKGPSYTKVAFKPDLSRFGMESLDSDILGVMRRRVYDINGSV-RDVNVYLNGKPLKI 243
Query: 265 KSFAEYVDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSF 305
++F YV++Y KS+ T +ERV++RWEI +S+ F+QVSF
Sbjct: 244 RNFKNYVELYLKSLEKMRKMDNGESDTTPSNIPTILYERVSDRWEIAFAVSDISFKQVSF 303
Query: 306 VNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFD 365
VN IAT GGTHV+Y+A+Q+ V ++ K K N+K + +KN++++F+N LI+NPAF
Sbjct: 304 VNSIATTTGGTHVNYIADQIVRKVSDIL--KKKKKNIKPYQIKNNMFIFINCLIENPAFT 361
Query: 366 SQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED 425
SQTKE LT R FGS+C++S +++ K+ K+ + + A+ + LKK+DG++
Sbjct: 362 SQTKEQLTTRVKDFGSRCDISSDYINKI-MKTDLATKIFEIADENANNALKKSDGSRKSR 420
Query: 426 VRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVR 485
+ KLEDAN AG ++ +CTLILTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVR
Sbjct: 421 ITDYPKLEDANKAGTKDGYKCTLILTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVR 480
Query: 486 EASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILI 545
EA+++Q+L N+EI IKKI+GL+ +Y + KSLRYGHLMIMTD
Sbjct: 481 EATADQILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD---------------- 524
Query: 546 FAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN--GK 603
QDHDGSHIKGL+INFI + +P LL IP FL+EFITPIVK T K
Sbjct: 525 ------------QDHDGSHIKGLIINFIETSFPGLLDIPGFLIEFITPIVKVTITKPIKK 572
Query: 604 VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQ 663
V+SF+++PDYE W+E + SW KYYKGLGTSTS E EYF N+ H K F
Sbjct: 573 VISFFNLPDYEKWREE-ESHKYSWKQKYYKGLGTSTSPEIIEYFSNLDTHLKKFHALQGD 631
Query: 664 DGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIP 723
D + I+LAFSKKK + RK+WL Q+EPG LD I SDF+NKELILFS+AD RSIP
Sbjct: 632 DKDLIDLAFSKKKADDRKEWLRQYEPGTVLDPTLNEIPISDFINKELILFSLADNVRSIP 691
Query: 724 SMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFV 783
S++DG KPGQRK+L+ FK+N E KVA + VS+++AYHHGEQ+L TI+GMAQ+FV
Sbjct: 692 SVLDGFKPGQRKVLYTCFKKNLTTEKKVANLAPAVSDYTAYHHGEQALVQTIIGMAQNFV 751
Query: 784 GSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQI 843
G+NNI L+PNG FGTR GGKDAA+ARYI+T L+ I R +F DD L Y+ ED + +
Sbjct: 752 GTNNIYFLKPNGAFGTRATGGKDAAAARYIYTELNKIARKVFHPADDPLFRYVQEDEKTV 811
Query: 844 EPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFG 903
EP WY+P++P VL+NG+EGIGTGWS+ IP +NP D+V N+R LLN E M+ MHPW+RG+
Sbjct: 812 EPEWYLPVVPMVLINGAEGIGTGWSTSIPPFNPLDVVNNIRHLLNDEEMDDMHPWFRGWT 871
Query: 904 GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---F 960
GT+EK S+ Y + G IE+V TL I ELP R WT +E L + ++ +
Sbjct: 872 GTMEKIESQR----YRMYGRIEQVGPNTLEITELPARTWTSTIKEHLLLGLGGSEKVKPW 927
Query: 961 IRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYD 1020
I+ + + T+ F + L++E M +T++ G ++FKL + IS NM FD +G IKKYD
Sbjct: 928 IKDMEEQHAE-TIKFIIKLTDEEMTKTRKLGFYERFKLISPISLQNMVAFDYRGKIKKYD 986
Query: 1021 TPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDL 1080
+IL++F+ +RLE+Y+KRK L+ E KL +V+FI +++ ++V N+ + L
Sbjct: 987 HVHEILKDFYEVRLEYYQKRKDYMTGRLQWEAEKLSFQVKFIKMIIDKSLIVTNKPKKQL 1046
Query: 1081 LLELRQKGF--------TPFPKNSKSIEAVV-----------AGATDETEESEENPEVVN 1121
+ EL + GF F K + +EA++ AT + ++ +E+ VN
Sbjct: 1047 ISELEELGFPRINKEGKPHFGKIDEEVEAIISEDEDEDLEESEEATRKKDKDDES--TVN 1104
Query: 1122 GVQSI--DYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDM 1179
G + + Y+YLL + I +LT E+ + LL + + E+++L K + + LW DLD
Sbjct: 1105 GPEELFGTYEYLLGLKIWSLTKERYEKLLKQKQEKETELENLLKLSAKDLWNNDLDDFLT 1164
Query: 1180 QLDELDKSD 1188
++ K D
Sbjct: 1165 AYEDFQKMD 1173
>sp|P06786|TOP2_YEAST DNA topoisomerase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TOP2 PE=1 SV=2
Length = 1428
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 580/1202 (48%), Positives = 786/1202 (65%), Gaps = 78/1202 (6%)
Query: 31 YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
YQK SQLEHIL RPDTYIGS+E Q WIY+EE+ MI + ++ VPGL+KIFDEILVNA
Sbjct: 12 YQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDEILVNA 71
Query: 91 ADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYD 150
ADNK RDP M + V I E I V N G G+P+EIH +E +Y+PE+IFGHLLTSSNYD
Sbjct: 72 ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 131
Query: 151 DNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEG 210
D+ KK TGGRNGYGAKL NIFSTEFI+ETAD +KY Q + NNM P I+ K+G
Sbjct: 132 DDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKITSYKKG 191
Query: 211 DNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEY 270
++TKV+FKPDL +F M L++D++ +M++RV D+ G + + + V LNG + +++F Y
Sbjct: 192 PSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIRNFKNY 250
Query: 271 VDMYPKSV-------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIAT 311
V++Y KS+ T +ER+N RWE+ +S+ FQQ+SFVN IAT
Sbjct: 251 VELYLKSLEKKRQLDNGEDGAAKSDIPTILYERINNRWEVAFAVSDISFQQISFVNSIAT 310
Query: 312 IKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKET 371
GGTHV+Y+ +Q+ ++ + KK K +VK+ +KN++++F+N LI+NPAF SQTKE
Sbjct: 311 TMGGTHVNYITDQIV-KKISEILKKKKKKSVKSFQIKNNMFIFINCLIENPAFTSQTKEQ 369
Query: 372 LTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISK 431
LT R FGS+CE+ E++ K+ K+ + + A+ + LKK+DGT+ + K
Sbjct: 370 LTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIADANEENALKKSDGTRKSRITNYPK 428
Query: 432 LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
LEDAN AG + +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+LNVREAS++Q
Sbjct: 429 LEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKMLNVREASADQ 488
Query: 492 VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
+L N+EI IKKI+GL+ +Y + KSLRYGHLMIMTD
Sbjct: 489 ILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTD---------------------- 526
Query: 552 FCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKA--TNKNGKVLSFYS 609
QDHDGSHIKGL+INF+ S +P LL I FL+EFITPI+K T ++FY+
Sbjct: 527 ------QDHDGSHIKGLIINFLESSFPGLLDIQGFLLEFITPIIKVSITKPTKNTIAFYN 580
Query: 610 MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
MPDYE W+E + +W KYYKGLGTS ++E +EYF N+ H K F D + I+
Sbjct: 581 MPDYEKWREE-ESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHSLQGNDKDYID 639
Query: 670 LAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGL 729
LAFSKKK + RK+WL Q+EPG LD K I SDF+NKELILFS+AD RSIP+++DG
Sbjct: 640 LAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNIRSIPNVLDGF 699
Query: 730 KPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNIN 789
KPGQRK+L+ FK+N E KVAQ + YVSE +AYHHGEQSLA TI+G+AQ+FVGSNNI
Sbjct: 700 KPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLAQNFVGSNNIY 759
Query: 790 LLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYM 849
LL PNG FGTR GGKDAA+ARYI+T L+ +TR +F DD L Y+ ED + +EP WY+
Sbjct: 760 LLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQEDEKTVEPEWYL 819
Query: 850 PIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKT 909
PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW+RG+ GTIE+
Sbjct: 820 PILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWFRGWTGTIEEI 879
Query: 910 ASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS---FIRGFRQ 966
+ Y + G IE++ + L I ELP R WT +E+L + ND +I+ +
Sbjct: 880 EP----LRYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDKIKPWIKDMEE 935
Query: 967 YSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQIL 1026
DD + F + LS E M +T++ G ++FKL + IS NM FD G IKKY++ +IL
Sbjct: 936 QHDD-NIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIKKYNSVNEIL 994
Query: 1027 EEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQ 1086
EF+++RLE+Y+KRK E L+ E+ K +V+FI ++ E+ V N+ R ++ EL
Sbjct: 995 SEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPRNAIIQELEN 1054
Query: 1087 KGFTPFPK---------NSKSIEAV--VAGAT----DETEESEENPEVVNGVQSI--DYD 1129
GF F K N + E + V GAT DE E+ V+NG + + Y+
Sbjct: 1055 LGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVINGPEELYGTYE 1114
Query: 1130 YLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDKSDA 1189
YLL M I +LT E+ Q LL + + E+++L K + + +W DL A ++ E + DA
Sbjct: 1115 YLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVGYQEFLQRDA 1174
Query: 1190 RA 1191
A
Sbjct: 1175 EA 1176
>sp|P87078|TOP2_CANAX DNA topoisomerase 2 OS=Candida albicans GN=TOP2 PE=3 SV=1
Length = 1461
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/1254 (45%), Positives = 810/1254 (64%), Gaps = 106/1254 (8%)
Query: 29 EMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILV 88
E YQK SQLEHIL RPDTYIGS+EK +W ++ E+++M+ + ++ VPGLYKIFDEILV
Sbjct: 60 ETYQKLSQLEHILKRPDTYIGSVEKTKTEMWCFDAETESMVFKEVTIVPGLYKIFDEILV 119
Query: 89 NAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSN 148
NAADNK RDP M ++V ID E+++I V N G G+P+E+H +E +Y+PELIFG+LLTSSN
Sbjct: 120 NAADNKIRDPSMKNIRVKIDAENNIIEVMNDGKGIPIEMHTKENMYIPELIFGNLLTSSN 179
Query: 149 YDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCK 208
YDD+ KK TGGRNG+GAKL NIFST+F +ETAD K YKQ +TNNM S+P I+ +
Sbjct: 180 YDDDQKKVTGGRNGFGAKLCNIFSTQFEVETADLNMGKLYKQSWTNNMSNVSKPKITTLR 239
Query: 209 EGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFA 268
+TK++F+PDL+KF+M L++D+++++++RV DL G + K+ + LN R+ + SF
Sbjct: 240 TKKEYTKITFRPDLSKFDMDCLDNDLLSVLRRRVYDLCGTV-KNCNIYLNDKRLNISSFK 298
Query: 269 EYVDMYPKSV------------------TRFHERVNERWEICVTLSEGQFQQVSFVNGIA 310
YV+MY K++ T HE N+RWE+ +S+G F QVSFVN IA
Sbjct: 299 GYVEMYVKAIKERSPEPEPQDGTIKNFTTIVHEVFNDRWEVAFAVSDGSFNQVSFVNSIA 358
Query: 311 TIKGGTHVDYVANQVANHVMAVVNKKNKNAN---VKAHNVKNHLWVFVNALIDNPAFDSQ 367
T GGTHV YV++Q+ N ++ ++KK K +K V++++++F+N LI+NPAF SQ
Sbjct: 359 TTSGGTHVKYVSDQIINKLVETLSKKEKGKKKLMIKPQEVRDNMFLFINCLIENPAFTSQ 418
Query: 368 TKETLTLRQSSFGSKCE-LSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDV 426
TKE LT + S FG K + ++ + L K+ IV+ + + AN + K L+K DG++ +
Sbjct: 419 TKEQLTTKVSQFGGKDKFVANDNLINRILKTSIVDKIRAIANANEDKALQKADGSRKSRI 478
Query: 427 RGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVRE 486
+G L DAN AG ++ CTLILTEG SA LA+AGLSVVGRD +G FPLRGKLLNVRE
Sbjct: 479 KGQVNLVDANKAGTKDGHNCTLILTEGLSAMNLAVAGLSVVGRDYYGCFPLRGKLLNVRE 538
Query: 487 ASSNQVLNNSEIGNIKKILGLKQGVEYN--NVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
AS++Q+ N+EI ++K+I+GL+ Y N+KSLRYGH+MIMTDQ
Sbjct: 539 ASADQISKNAEINSLKQIIGLQHKKVYTAENIKSLRYGHIMIMTDQ-------------- 584
Query: 545 IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNK---- 600
D DGSHIKGL+INF+ + +P LL IP FL+EFITPIVK T K
Sbjct: 585 --------------DQDGSHIKGLIINFLETSFPGLLDIPGFLLEFITPIVKVTVKARGA 630
Query: 601 -NGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
+V+ FY+MP++E W+++ G W+ KYYKGLGTST E +EYF + H K F
Sbjct: 631 GGKRVIPFYTMPEFEHWRDT-EGKQCRWTQKYYKGLGTSTPMEAREYFTALDRHLKRFHA 689
Query: 660 EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
+D + I+LAFSKKK + RK+WL F PG HLD + I SDF+NKE ILFSM+D
Sbjct: 690 LQGEDKDYIDLAFSKKKADERKEWLQGFLPGTHLDPEITEIPISDFINKEFILFSMSDNV 749
Query: 720 RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
RSIPS++DG KPGQRK+L+ FK+ E KVAQ +GYVSE++ YHHGEQSL TI+G+A
Sbjct: 750 RSIPSVLDGFKPGQRKVLYGCFKKKLRSEIKVAQLAGYVSENTGYHHGEQSLVQTIIGLA 809
Query: 780 QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
Q+FVGSNNIN+L+PNG FG+R GGKD ++ARYIFT LS ITR +F DD L Y+ +D
Sbjct: 810 QNFVGSNNINVLKPNGSFGSRAAGGKDFSAARYIFTELSEITRKIFNPLDDPLYTYVQDD 869
Query: 840 GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
Q +EP WY+P++P +LVNG+EGIGTGWS+ IP+YNP+D+V N+RRL+NGE ++ M PWY
Sbjct: 870 EQTVEPEWYLPVLPMILVNGAEGIGTGWSTNIPSYNPKDLVTNIRRLMNGEELQEMTPWY 929
Query: 900 RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESII--DQN 957
+G+GG +E ++ + V+G IE+++ T+ I E+P++ WT + +EFL S ++
Sbjct: 930 KGWGGDLEPMGPQK----FKVSGRIEQIDSNTVEITEIPVKTWTNNVKEFLLSGFGNEKT 985
Query: 958 DSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIK 1017
+I+ ++ T++ F V L++ M ++ + GLL++FKL +++S +NM FD G IK
Sbjct: 986 QPWIKDMEEHH-TTSIRFVVKLTDAEMQKSLRIGLLERFKLVSSLSLANMVAFDPMGRIK 1044
Query: 1018 KYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
KY+ +I+++F+++RLE+Y+KRK +NL+ +LL L + RFI ++ ++ V N+K+
Sbjct: 1045 KYNDVLEIIKDFYYVRLEYYQKRKDYMTDNLQNQLLMLSEQARFIKMIIEKQLSVANKKK 1104
Query: 1078 TDLLLELRQKGFTPFPKNSKSIE-----------------------------AVVAGATD 1108
L+ L + FT F K+ K I+ +V
Sbjct: 1105 KQLVALLEEHNFTKFSKDGKPIKSSEELLTGDDADEEEETQEQEGDEDVGNTSVANIQEG 1164
Query: 1109 ETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPES 1168
E E++ PE + YDYLL MAI +LT E+ ++ RD+ E++ L + +
Sbjct: 1165 EPEQAAHVPETIYS----SYDYLLGMAIWSLTYERFMRIMQQRDQKEAELNALLSKSAKD 1220
Query: 1169 LWVKDLDALDMQLDELDKSDARAEEERMKIKGNGNGDAGPKIVAKRAPKNARKN 1222
LW +DLD L E DK R E+ER + NG K +RA A K+
Sbjct: 1221 LWNQDLDEF---LAEFDKFLLRDEQERESLASNGK----KKSTKRRAKATATKD 1267
>sp|P90520|TOP2M_DICDI DNA topoisomerase 2, mitochondrial OS=Dictyostelium discoideum
GN=top2mt PE=2 SV=2
Length = 1284
Score = 985 bits (2546), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/1231 (43%), Positives = 766/1231 (62%), Gaps = 140/1231 (11%)
Query: 25 KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWI-----YEEESKTM----------- 68
+ IE++YQKK+ EH+LLRPD+YIG+IEK +W+ + +E KT+
Sbjct: 85 RKIEDIYQKKTPTEHVLLRPDSYIGTIEKIEDDMWVLSNSMFNKEKKTIELNNDNNEKNV 144
Query: 69 -----------------IHRT-ISYVPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQE 110
IH +Y+PGL KI+DEILVNAADNK+RD KM +KV I+
Sbjct: 145 ESTTTTTTKTNKKPLTYIHPIKATYIPGLLKIYDEILVNAADNKKRDSKMSFIKVEINPN 204
Query: 111 HDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNI 170
+ IS+ N G G+PV +HQ E YV E++ G+L++ SN++D+ K GGRNG+GAKLTNI
Sbjct: 205 ENSISIMNDGKGIPVVMHQTENCYVVEMVMGNLMSGSNFNDSELKVVGGRNGFGAKLTNI 264
Query: 171 FSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD-NWTKVSFKPDLAKFNMTH 229
FS EF +ET D KKY Q ++NNMG +SEP I+ EG+ ++TK++FKPDL KF +
Sbjct: 265 FSKEFTVETVDKSSGKKYFQRWSNNMGDRSEPIITPIGEGESDYTKITFKPDLEKFKIKS 324
Query: 230 LEDD-VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHER---- 284
L DD ++ LM++R+ D+AGC + V LNG R+ +F YV +Y + +R
Sbjct: 325 LWDDNILQLMERRLYDIAGC-NTELMVTLNGKRLNY-NFQSYVKLYEHHLNNSTKREDNE 382
Query: 285 ------------VNERWEICVTLSE-GQFQQVSFVNGIATIKGGTHVDYVANQVANHVMA 331
++ RW+I + LSE GQF QVSFVN I T+KGGTHV+++A+Q+ +V
Sbjct: 383 EQYREESFEFGEISPRWKIGIGLSETGQFTQVSFVNSINTVKGGTHVNFLADQIVRYVGE 442
Query: 332 VVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLK 391
+ KK+ + ++ N+K+HL +FVN L+DNP+FDSQ+KETLT + FGS E+ E L
Sbjct: 443 KLKKKHSDLEIRPMNIKHHLALFVNCLVDNPSFDSQSKETLTTKPMLFGSTPEIPESLLA 502
Query: 392 KVTAKSGIVETLLSWANFKQSKDLKKNDG---TKTEDVRGISKLEDANLAGGRNSEQCTL 448
+ S I+E + WA KQ DL + +KT ++ ISKL+DAN AGG S++CTL
Sbjct: 503 QFVKNSKIIERVAGWALMKQKADLIHSTSGRQSKTTLIKSISKLDDANWAGGLKSKECTL 562
Query: 449 ILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK 508
I+TEGDSAK+LA+AGLSVVGR+ +GVFPLRGKLLNVR+ +S Q+L+N EI N+ ILGL
Sbjct: 563 IITEGDSAKSLALAGLSVVGRNSYGVFPLRGKLLNVRDVASKQLLSNEEINNLTTILGLS 622
Query: 509 QGVEYN---NVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHI 565
Y+ +++ LRYG +MIM DQ DHDGSHI
Sbjct: 623 HKNSYDTDESMEDLRYGRVMIMADQ----------------------------DHDGSHI 654
Query: 566 KGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNA- 624
KGL++NFIH FWP+LLK FLVEF+TPI+KAT + + SF+++ DYE W+E++ +
Sbjct: 655 KGLVMNFIHYFWPNLLK-RGFLVEFVTPIIKATKSSTQKKSFFTIKDYEKWRETISSDQL 713
Query: 625 SSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWL 684
++IKYYKGLGTSTS E KEYF N+ H F+W D+ D + I++AF+K R++W+
Sbjct: 714 KQYTIKYYKGLGTSTSAEAKEYFSNLDKHVIKFIWGDEAD-DLIKMAFAKDLSSLRQRWI 772
Query: 685 LQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRN 744
+ + +D K I Y DF+NKELI +S A RSIPS++DGLKPGQRKILF SFKR
Sbjct: 773 KETDMSQGIDHSIKEITYPDFINKELIHYSWAANLRSIPSLIDGLKPGQRKILFASFKRR 832
Query: 745 FIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGG 804
E KV+Q SGYV+E ++YHHGEQSL STI+ MA +FVGSNN+ LL P+GQFGTR QGG
Sbjct: 833 LTNEIKVSQLSGYVAEQTSYHHGEQSLNSTIVKMAHNFVGSNNLPLLTPSGQFGTRLQGG 892
Query: 805 KDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIG 864
D+ASARYIFT+L P+ R+LF + DD LL+YL E+G+ I+P +Y+PIIP +LVNGSEGIG
Sbjct: 893 SDSASARYIFTKLEPVARYLFNELDDPLLNYLEEEGESIQPDYYIPIIPMLLVNGSEGIG 952
Query: 865 TGWSSYIPNYNPRDIVANVRRLLNGEM-MEPMHPWYRGFGGTIEKTASKEAGVTYTVTGI 923
G S+ IP ++P DI+ + LN ++ ++ + PWYRGF GTI TY G+
Sbjct: 953 VGMSTSIPLFSPIDIIDQLMLRLNNQVALKKLIPWYRGFKGTISPDRH-----TYRTNGV 1007
Query: 924 IEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSE-- 981
I+ V L I ELPI RWT DY+E L +ID++ I+ F++ + + +V F + L+
Sbjct: 1008 IKLVGR-NLEITELPIGRWTSDYKEVLNDLIDKD--VIKSFQESNTENSVHFTILLNNNQ 1064
Query: 982 -ESMMRTKQEGLLKKFKLTTTISTSNMHL--FDSKGVIKKYDTPEQILEEFFHIRLEFYE 1038
E M + L+K FKL+ ++ N HL FD I+K ++ E+I+++F+ +RL+FY
Sbjct: 1065 LEQMEDLTENELIKLFKLSASL---NFHLTCFDENSKIQKLESVEEIIDQFYKVRLQFYG 1121
Query: 1039 KRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQK---GFTPFPKN 1095
KR++ L++L+ ++ +L ++F+ + +G++ + R + DL+ EL GF F +
Sbjct: 1122 KRREYLLKSLDNQIKRLTTTIQFLEVIASGKLKIQGRSKQDLIKELESGEIVGFENFGTH 1181
Query: 1096 SKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLN 1155
PEV Y +L S++I +T E++ L K
Sbjct: 1182 P--------------------PEV--------YQHLFSLSILDITKERIDNLTNQLTKRK 1213
Query: 1156 EEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
E + + P+SLW DL L L++ DK
Sbjct: 1214 SEHQSISSSDPKSLWTADLQQLKEYLEKSDK 1244
>sp|P41001|TOP2_PLAFK DNA topoisomerase 2 OS=Plasmodium falciparum (isolate K1 / Thailand)
GN=TOP2 PE=3 SV=1
Length = 1398
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/933 (48%), Positives = 613/933 (65%), Gaps = 48/933 (5%)
Query: 278 VTRFHERVNERWEICVTLSEG-QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK 336
+ + HE+ RWEI V+ S+G QFQQVSFVN I T KGG+HV+Y+ Q+ + + N K
Sbjct: 321 IVKIHEK-QHRWEIVVSKSDGSQFQQVSFVNSICTTKGGSHVNYIVEQLLSSLSKKANAK 379
Query: 337 NKNA-NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTA 395
NK +K+ +++NHLWVFVN LI NP FDSQTKETLT + FGSKC LS++ + V
Sbjct: 380 NKGGMEIKSGHIRNHLWVFVNCLIVNPTFDSQTKETLTTKPVKFGSKCILSDKTINNV-L 438
Query: 396 KSGIVETLLSWANFKQSKDLKK----NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILT 451
KS I+ +L WA K +LKK E + GI KLEDAN AG + S++CTLILT
Sbjct: 439 KSPILSNILLWAQAKAQVELKKKMKAGSSKARERIIGIPKLEDANDAGSKYSQECTLILT 498
Query: 452 EGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK-QG 510
EGDSAK +AGLS+VGRD++GVFPL+GKLLNVR+AS Q+++N EI NI +I+GL
Sbjct: 499 EGDSAKTSCLAGLSIVGRDKYGVFPLKGKLLNVRDASFKQLMDNKEIQNIFRIMGLDITD 558
Query: 511 VEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLI 570
+++K LRYG LMIMTDQ D+DGSHIKGLLI
Sbjct: 559 KNKDDIKGLRYGSLMIMTDQ----------------------------DYDGSHIKGLLI 590
Query: 571 NFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIK 630
N IH FWPSLLK FL EF+TPIVK K + SF+++ +YE WKE+ N W IK
Sbjct: 591 NMIHKFWPSLLKHKGFLSEFVTPIVKV-QKGSQEYSFFTIAEYEQWKEN--TNLLGWKIK 647
Query: 631 YYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPG 690
YYKGLGTST +E K+YF +I HK F+W D+DG++I++AFSKK+IE RK WL F G
Sbjct: 648 YYKGLGTSTDREFKQYFSDIKNHKIMFLWTGDRDGDSIDMAFSKKRIEDRKLWLQNFILG 707
Query: 691 NHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAK 750
+++D KEK + Y DFVNKELI +S D +RSIP+++DG KPGQRK+L+ FKRN E K
Sbjct: 708 SYVDHKEKDLSYYDFVNKELIYYSRYDTERSIPNIMDGWKPGQRKVLYGCFKRNLRNECK 767
Query: 751 VAQFSGYVSEHSAYHH-GEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAAS 809
VAQ GY++EHSAYHH GE SL TI+ MAQ FVGSNNIN L+P GQFG+R +GGKDA++
Sbjct: 768 VAQLVGYIAEHSAYHHHGESSLQQTIINMAQTFVGSNNINFLEPCGQFGSRKEGGKDASA 827
Query: 810 ARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSS 869
ARYIFT+L+ TR +F + DD +L YLNE+GQ+IEP +Y+P+IPT+LVNG EGIGTG+SS
Sbjct: 828 ARYIFTKLASSTRSIFNEYDDPILKYLNEEGQKIEPQYYIPVIPTILVNGCEGIGTGYSS 887
Query: 870 YIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNE 929
+IPNYN +DI+ N++R +N E + PM PWY+ F G IE Y GII +++
Sbjct: 888 FIPNYNYKDIIDNIKRYINKEPLIPMVPWYKDFKGRIESNGK----TGYETIGIINKIDN 943
Query: 930 TTLRIKELPIRRWTQDYREFLESII-DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTK 988
TL I ELPI++WTQDY+EFLE ++ D+ I + S + F + + + + +
Sbjct: 944 DTLEITELPIKKWTQDYKEFLEELLTDEKHQLILDYIDNSSHEDICFTIKMDPAKLQKAE 1003
Query: 989 QEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENL 1048
+EGL K FKL +T++T+NM LFD +++Y T IL+EF + RL+ YE RK + L
Sbjct: 1004 EEGLEKVFKLKSTLTTTNMTLFDPNLKLQRYSTELDILKEFCYQRLKAYENRKSYLISKL 1063
Query: 1049 ELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFP--KNSKSIEAVVAGA 1106
E E + NK +FIL +VN E++VN +K+ L+ EL +KG+ P+ K E
Sbjct: 1064 EKEKRIISNKTKFILAIVNNELIVNKKKKKVLVEELYRKGYDPYKDINKIKKEEIFEQEL 1123
Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
D + E+N E++ G+ DYDYLLSM I +LTLEKV+ LL + E++ LR T
Sbjct: 1124 LDAADNPEDNEEIIAGITVKDYDYLLSMPIFSLTLEKVEDLLTQLKEKERELEILRNITV 1183
Query: 1167 ESLWVKDLDALDMQLDELDKSDARAEEERMKIK 1199
E++W+KD++ ++ ++ + EE K K
Sbjct: 1184 ETMWLKDIEKVEEAIEFQRNVELSNREESNKFK 1216
Score = 308 bits (788), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/258 (57%), Positives = 193/258 (74%), Gaps = 8/258 (3%)
Query: 22 APNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYK 81
A NKTIEE YQKKSQ+EHILLRPDTYIGS+E HTQ LW++ +E M+ + I+YVPGLYK
Sbjct: 2 AKNKTIEERYQKKSQIEHILLRPDTYIGSVEMHTQLLWVWNKEKNRMVQKNITYVPGLYK 61
Query: 82 IFDEILVNAADNKQRDPK-----MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVP 136
IFDEI+VNAAD K R+ + M +K+ I++E+ ISV+N G+G+PV+IH+E +YVP
Sbjct: 62 IFDEIIVNAADVKAREKEKSENPMTCIKIEINKENKRISVYNDGEGIPVDIHKEMNIYVP 121
Query: 137 ELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNM 196
+IFG LLTS NYDD + TGGRNG+GAKLTNIFS EFI++ D R K++K +++NM
Sbjct: 122 HMIFGELLTSDNYDDAEDRITGGRNGFGAKLTNIFSKEFIVQCGDSSRKKEFKMTWSDNM 181
Query: 197 GKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVE 256
K SEP+I K G ++ KV+FKPDL KF MT ++DD+ +L+ KRV DLAG SV+V
Sbjct: 182 SKFSEPHI-KNYNGKDYVKVTFKPDLNKFGMTEMDDDIESLLFKRVYDLAGTC--SVRVY 238
Query: 257 LNGHRVPVKSFAEYVDMY 274
LNG R+ VK F YVD+Y
Sbjct: 239 LNGQRLAVKDFKSYVDLY 256
>sp|P34534|TOP2M_CAEEL Putative DNA topoisomerase 2, mitochondrial OS=Caenorhabditis elegans
GN=R05D3.12 PE=3 SV=5
Length = 1170
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/1177 (41%), Positives = 696/1177 (59%), Gaps = 93/1177 (7%)
Query: 31 YQKKSQLEHILLRPDTYIGSIE-KHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVN 89
Y+KKS EH+LLRPDTYIG + + Q +W+ + E++ MI + ++Y PGL KIFDEILVN
Sbjct: 47 YEKKSPTEHVLLRPDTYIGGVAMREDQIIWLRDSENRKMIAKEVTYPPGLLKIFDEILVN 106
Query: 90 AADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
AADNK RD M+ ++V +D+E ISV N+G G+PVEIH EG+YVP L+FG+L TSSNY
Sbjct: 107 AADNKARDSSMNRLEVWLDRETARISVWNNGSGLPVEIHPTEGIYVPTLVFGNLFTSSNY 166
Query: 150 DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
DD+ KT GGRNGYGAKL NIFS EFI+ET D + ++++Q + +NM K +E + + +
Sbjct: 167 DDSEIKTVGGRNGYGAKLCNIFSKEFIVETVDTRIKRRFRQKWYDNMKKCNEAEVVEILD 226
Query: 210 GD--NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSF 267
++TKV F PDL +F + L DDV+ L+ +RV ++A L + V V LNG + V F
Sbjct: 227 ETVKDYTKVEFVPDLERFQIDKLSDDVIDLIGRRVFEVAATLPRDVDVYLNGQKCDVDGF 286
Query: 268 AEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQ--------VSFVNGIATIKGGTHVD 319
+YV M+ S + RW + V F + VSFVN I T KGG+HVD
Sbjct: 287 EDYVKMFNDSSSLLFLHPTPRWHVGVAKRNNFFGESHVVLPKIVSFVNNINTEKGGSHVD 346
Query: 320 YVANQVANHVMAVVNKK--NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQS 377
YV +++ N + +V+ K + +VK +KN+L +F+N LI+NP+F+SQTKETLT +
Sbjct: 347 YVMDKIVNIIKPIVDSKLGDPTKSVKPAVIKNNLSIFINCLIENPSFESQTKETLTTKAK 406
Query: 378 SFGSKCELSEEFLKKVTAKSGIVETLLSWA-NFKQSKDLKKNDGTKTEDVRGISKLEDAN 436
+FGS E + + +SG++E ++ N K+ K K VR I KLEDA
Sbjct: 407 NFGSIFECDAKKTAEWAEQSGLIEDIVEEVLNMKKKKLPGKR--VSVSSVRDIVKLEDAE 464
Query: 437 LAG-GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNN 495
AG +E+CTLILTEGDSAKALA+AGL V+GR+ +GVFPL+GKLLNV + N
Sbjct: 465 WAGITGTAEKCTLILTEGDSAKALALAGLEVLGRETYGVFPLKGKLLNVSNLDDARASKN 524
Query: 496 SEIGNIKKILGLKQGVEYNNV--KSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
EI N+ +ILGLK + N++ +SLRYG L+I+ DQ
Sbjct: 525 EEISNLLRILGLKFE-DSNSITRESLRYGRLLILADQ----------------------- 560
Query: 554 FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVLSFYSMPDY 613
D DGSHIKGL++NFIH FWPSL+ F+ F TP++KA K KV SF+SM +Y
Sbjct: 561 -----DEDGSHIKGLIVNFIHKFWPSLVHTDGFIQSFRTPLLKA-KKGDKVRSFFSMNEY 614
Query: 614 EAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIELAFS 673
W + G W IKYYKGLGTSTS E +EYF ++ H +F + D +AI +AF
Sbjct: 615 RKWADVEEG--GKWKIKYYKGLGTSTSNEAREYFSDLDHHTVNFKYTGTTDDDAIRMAFD 672
Query: 674 KKKIEARKKWLLQFEPG-NHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPG 732
+ K + RK+W+ + E + D + I Y +FV+ +L+ F M DL+RSIPS++DGLKP
Sbjct: 673 RDKSDERKEWIRRSENEITNEDDGKTEISYQEFVDGQLMQFGMVDLKRSIPSLIDGLKPS 732
Query: 733 QRKILFCSFKR-NFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLL 791
QRKIL+ + E KV+Q +G V+ +YHHGE+SL TI+ M Q F GS+N+ LL
Sbjct: 733 QRKILWTLLNNMDESTEIKVSQLAGAVAHRQSYHHGEESLVRTIIRMGQTFCGSSNLPLL 792
Query: 792 QPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPI 851
QP GQFGTR++GG DAASARYIFT L+P TR LFP+ DD LL E+G +EPTW PI
Sbjct: 793 QPIGQFGTRHEGGNDAASARYIFTALAPTTRLLFPQADDDLLQKNVEEGMVVEPTWLCPI 852
Query: 852 IPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMME-PMHPWYRGFGGTIEKTA 910
+P +L+NG+EGIGTGWS+ I N NP DI+ +RR ++ E + P+Y F G +E
Sbjct: 853 VPLILINGTEGIGTGWSTKIANRNPIDIIDMIRRKIDSISTEYEIPPFYEEFRGKLEVVT 912
Query: 911 SKEAGVTYTVTGIIEEV-----NETTLRIK--ELPIRRWTQDYREFLESIIDQNDSFIRG 963
+ + +G I+ + N +T I+ ELPI WT Y+E L I++ +
Sbjct: 913 PTK----FISSGKIQLIRPERKNASTFSIEIVELPIGIWTSKYKEKLSKIVETLP--VLE 966
Query: 964 FRQYSDDTTVDFEVFLSEESMMRTKQEG---LLKKFKLTTTISTSNMHLFDSKGVIKKYD 1020
F + + V F + L + R Q+ LL FKL T++ T N LFD G +K++
Sbjct: 967 FSERHTEKRVHFRITLDRKKSSRFLQKSNSDLLNYFKLRTSL-TENRVLFDRNGELKEFG 1025
Query: 1021 TPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKRTDL 1080
+I EFF +R + YEKR K+Q E E +L+ +EN++ FI V NG I + + R L
Sbjct: 1026 NISEIAAEFFEVRRDLYEKRLKIQKEECEAKLIYVENQLNFIEMVTNGTIEIRSMGRNQL 1085
Query: 1081 LLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSIDYDYLLSMAIGTLT 1140
+L++ GF P + + + +Y YLL M + LT
Sbjct: 1086 EEKLQEMGFRVDPMAT----------------------IAKNSKKANYGYLLEMPVSRLT 1123
Query: 1141 LEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDAL 1177
++++ L + + E++ A +S+W +LD L
Sbjct: 1124 SDEMKRLEERKSRRRTELEAAESADWKSVWRSELDKL 1160
>sp|Q5UQE6|TOP2_MIMIV DNA topoisomerase 2 OS=Acanthamoeba polyphaga mimivirus GN=TOP2
PE=3 SV=1
Length = 1263
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/995 (43%), Positives = 611/995 (61%), Gaps = 101/995 (10%)
Query: 25 KTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEES----KTMIHRTISYVPGLY 80
K+IEE YQKK+ EHIL PDTYIGSIE+ T +WI+ E + +I + I+YVPGLY
Sbjct: 12 KSIEEKYQKKNLHEHILHSPDTYIGSIEEKTCNMWIFNESAGEDDAKIIFKEITYVPGLY 71
Query: 81 KIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIF 140
KI+DE++VNAAD+ +R + +KV IDQ+ ISV N+GDG+ V IH+E ++VP +IF
Sbjct: 72 KIYDEVIVNAADHNKRCQTCNIIKVDIDQKTGQISVWNNGDGIDVAIHKEHNIWVPSMIF 131
Query: 141 GHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKS 200
G LLTS+NYD N +KT GG+NG+GAKL NI+S EF IET D + KK+ Q FTNNM K
Sbjct: 132 GELLTSTNYDKNEEKTVGGKNGFGAKLANIYSVEFTIETVDANKGKKFFQRFTNNMYDKE 191
Query: 201 EPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGH 260
EP IS K+ ++TK++F PD KF + L+DD +AL KKRV DLA + + KV N
Sbjct: 192 EPKISSFKKS-SYTKITFIPDFKKFGLKCLDDDTLALFKKRVFDLA--MTTNAKVYFNDK 248
Query: 261 RVPVKSFAEYVDMY----PKSVTRFHERVNERWEICVTL---SEGQFQQVSFVNGIATIK 313
++ +F +YV +Y + + +ERW++ V + + Q +SFVN I T +
Sbjct: 249 QIVQNNFKKYVGLYFPEGSQHKVVIDDTTHERWKVGVIYDPTDQLEHQNISFVNSICTSR 308
Query: 314 GGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
GGTHV+ V Q+ N + + KK KN +K +K +L FV+A I NP FD+QTKE LT
Sbjct: 309 GGTHVEQVVGQIVNGLKTAIVKKAKNVQIKPAMIKENLIFFVDATIVNPDFDTQTKEYLT 368
Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLE 433
+ ++FGSK E++E+F+K V K+G+ + +++ A ++ +L K DG VR KL
Sbjct: 369 KKAANFGSKFEVTEKFIKGVI-KTGVCDQIIANAKAREEANLSKTDGKGRGPVR-YEKLY 426
Query: 434 DANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVL 493
+A+ AG + +CTLILTEGDSAK AM+GL+V+GRD +GVFPLRGKLLNVR+AS ++
Sbjct: 427 NAHKAGTKEGYKCTLILTEGDSAKTFAMSGLNVIGRDYYGVFPLRGKLLNVRDASPKKIA 486
Query: 494 NNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFC 553
+N EI IKKI+GL+QG Y+++K LRYG +MI+ D
Sbjct: 487 DNEEITAIKKIVGLEQGKVYDDLKGLRYGSIMILAD------------------------ 522
Query: 554 FMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIV---KATNKNGKVLSFYSM 610
QD DG HIKGL++NFIH FWPSL+K F+ F TP++ K K +V++F S
Sbjct: 523 ----QDVDGYHIKGLIMNFIHCFWPSLVKYEGFIQSFATPLLKATKGKGKTKQVVAFTSP 578
Query: 611 PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---------- 660
+E WK+ + WSIKYYKGLGTS E +E F ++ + WE
Sbjct: 579 QSFEEWKKE-NNDGKGWSIKYYKGLGTSDPAEAQECFADLNDKLVKYFWEPKKKNLESES 637
Query: 661 --------------------------------------DDQDGEAIELAFSKKKIEARKK 682
D +A+ LAF+ + + RK
Sbjct: 638 NSKSVDSNKSKTTNKKKIESEFIEEESDIISDTYKPKNKDISEDAMTLAFAGGREDDRKI 697
Query: 683 WLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFK 742
W+ + P N+LD +K I Y DF++KELI FS+ D+ RS+P+++DG KP RK+ + S +
Sbjct: 698 WINTYNPDNYLDPSKKRISYYDFIHKELITFSVDDVLRSVPNLMDGFKPSHRKVFYGSVE 757
Query: 743 RNFIK-EAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRN 801
+N K E KV+ +G+VS + YHHG+QSL+STI+GMAQ++VGSNN+NLL P G FG+R
Sbjct: 758 KNIYKQEIKVSDLTGFVSNMTKYHHGDQSLSSTIVGMAQNYVGSNNLNLLMPLGMFGSRL 817
Query: 802 QGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSE 861
GGKD+AS RY+ T+L + + +F D +L + +ED +IEP +Y PIIP +LVNG+E
Sbjct: 818 TGGKDSASPRYLNTKLDDLAKKIFIDYDFDILQHQSEDNCRIEPVYYAPIIPMILVNGAE 877
Query: 862 GIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVT 921
GIGTG+S+ I NPRDI+AN++RLL E + M PW+R GTIEK G Y
Sbjct: 878 GIGTGYSTKIYPCNPRDIIANIKRLLTNENPKTMKPWFRHLTGTIEKI----DGAKYISR 933
Query: 922 GIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQ 956
E + + T+ I +LP+ WT +Y+ FL+++I Q
Sbjct: 934 AKYEIIGKDTIHITDLPVGIWTDNYKAFLDNLIVQ 968
>sp|P27570|TOP2_CRIFA DNA topoisomerase 2 OS=Crithidia fasciculata GN=TOP2 PE=3 SV=1
Length = 1239
Score = 618 bits (1594), Expect = e-176, Method: Compositional matrix adjust.
Identities = 406/1191 (34%), Positives = 614/1191 (51%), Gaps = 119/1191 (9%)
Query: 31 YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
YQK + ++H+LLRP+ Y+GSIE + +++++ M+ ++ GL KI DEIL+NA
Sbjct: 7 YQKLTPIDHVLLRPEMYVGSIETQSIPMFVFDPAKGKMVWESMQVNQGLLKIVDEILLNA 66
Query: 91 ADN---KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
ADN R +M + + I +++ V N G G+P+ +E +Y+PE++FGHLLTSS
Sbjct: 67 ADNINNSVRGARMTYISIKISDSGEIM-VENDGAGLPIVKSKEHKMYIPEMVFGHLLTSS 125
Query: 148 NYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKC 207
NY+++ TT GR+GYGAKLTNI ST+F + R ++ +T++M + P +S
Sbjct: 126 NYNNDASSTTAGRHGYGAKLTNILSTKFSVVCRTAGR--EFHMSWTDHMRMATTPRVSNV 183
Query: 208 KEGD-NWTKVSFKPDLAKFNM--THLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPV 264
+ N T+V+F PD A F + D+ ++ KR++DLA K ++V LN
Sbjct: 184 DPKEKNVTRVTFMPDYAHFGFPTAAISLDMKRVLHKRIMDLAAMFSK-IEVRLNNVPFGF 242
Query: 265 KSFAEYVDMY----------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKG 314
++F +Y +Y P+ H N L++ + V VNG+ T G
Sbjct: 243 QTFNDYARLYSLPGADGAMPPEPFV--HTGPNGSIAFVPQLTQSPKRIVGVVNGVVTYNG 300
Query: 315 GTHVDYVANQVANHVMAVVNKKNKNANVKAHN-VKNHLWVFVNALIDNPAFDSQTKETLT 373
GTH + + ++ K+ V N V H V V + P FDSQ+K L
Sbjct: 301 GTHCTSAMEILETGLDSLSRSLKKDGKVIDTNRVARHFTVLVFLIQSQPKFDSQSKARLV 360
Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGT-----KTEDVRG 428
S + + L + A +E ++ + + + +L K GT +
Sbjct: 361 ----STVTMPRVPRTALDQYLAAMPFLEAHMNSMDDQLAAELNKEIGTGKRLSSRSLISS 416
Query: 429 ISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREAS 488
I+KL DA + TLI+TEGDSAKALA+ LS + GVFPLRGKLLNVR +
Sbjct: 417 ITKLVDATSSRSDGKNIRTLIVTEGDSAKALALNSLSSEQKKFCGVFPLRGKLLNVRNKN 476
Query: 489 SNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAW 548
++ E+ ++ LGL+ G Y + LRY L++MTDQ
Sbjct: 477 LKRLKTCKELQDLFLALGLELGKTYKSPAELRYQRLLVMTDQ------------------ 518
Query: 549 ITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVK--ATNKNGKVL 605
D DGSHIKGL+IN S WPSLL+ P ++ F TPIVK K +V+
Sbjct: 519 ----------DADGSHIKGLVINAFESLWPSLLQHNPGYISLFSTPIVKIKVNGKAKEVV 568
Query: 606 SFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDG 665
+F+S D+ W+ + + +S KYYKGLGTST+ EGKEYF ++ + V E +D
Sbjct: 569 AFHSFRDFHRWQRA--NPNARYSAKYYKGLGTSTTAEGKEYFADMERNVMRLVVEP-KDH 625
Query: 666 EAIELAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
++ F ++E RK+W+ + F+ +D+ +K + DFV+KE++ F++ R+I
Sbjct: 626 RLLDSVFDSAEVEWRKEWMSKANAFQGEVDIDRSKKLLTIGDFVHKEMVHFALVGNARAI 685
Query: 723 PSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDF 782
P VDGLKP QRKIL+ KR+ + AKVAQ SGY+SE S++HHGE SL TI+ MAQ+F
Sbjct: 686 PHCVDGLKPSQRKILWAMLKRHSSEAAKVAQLSGYISEVSSFHHGEASLQETIVKMAQNF 745
Query: 783 VGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQ 842
G NNINLL P GQFG+R Q G D A+ RYIFT+LS R LFP+DDD LLDY++E+G
Sbjct: 746 TGGNNINLLVPEGQFGSRQQLGNDHAAPRYIFTKLSRFARLLFPEDDDPLLDYIDEEGTM 805
Query: 843 IEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHPW 898
+EP Y+PI+P +L NG+ GIG G+++ IP+++P D+ A VR ++NGE ++ + PW
Sbjct: 806 VEPNHYVPILPLLLCNGAVGIGFGFATNIPSFHPLDVSAAVRAMINGESAKQVVRNLVPW 865
Query: 899 YRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQND 958
GF GT+ + KE Y G L + ELP + +R + S+ +
Sbjct: 866 AVGFQGTVRRGPEKE----YIAVGKYTAHRNGRLHVSELPWMTSIEAFRSHISSLASSD- 920
Query: 959 SFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKK 1018
++ YS +D ++ + E SM T L+ I N +F G +
Sbjct: 921 -VVQRIADYSGANHIDIDLIVREGSM--TTWAECETDLALSQRIYI-NGTVFSPDGTLSP 976
Query: 1019 YDTP-EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
D +L+ + RL+ Y++R+ Q+ LE++L +L++ +F+ G I
Sbjct: 977 IDADLSPVLQWHYDRRLDLYKRRRTRQIGLLEMDLARLQSTRKFVEHFRQGHI------- 1029
Query: 1078 TDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLLSMA 1135
D L ATD+T V G+ +D YDY+L
Sbjct: 1030 -DFL-----------------------AATDDTLTKT---CVKLGLVRVDDGYDYILKKP 1062
Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
I T + L AD K + + L++ TP +W+ DLD D E ++
Sbjct: 1063 ITFYTKTSTEKLQADIKKTQDSIAVLKQTTPVKMWLTDLDKFDKTFQEYER 1113
>sp|P30190|TOP2_TRYCR DNA topoisomerase 2 OS=Trypanosoma cruzi GN=TOP2 PE=3 SV=1
Length = 1232
Score = 612 bits (1579), Expect = e-174, Method: Compositional matrix adjust.
Identities = 398/1188 (33%), Positives = 622/1188 (52%), Gaps = 123/1188 (10%)
Query: 31 YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
Y+K + ++H+L+RP+ Y+GS++ + ++++++ E M+ ++ GL KI DEIL+NA
Sbjct: 7 YKKLTPIDHVLIRPEMYVGSVDTSSSSMFVFDHEKGRMVWESLKVNHGLLKIVDEILLNA 66
Query: 91 ADN-KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
+DN + +M ++V I + + I++ N G G+P+ +E +Y+PE++FGHLLTSSNY
Sbjct: 67 SDNIANKGGRMTYIRVHITEAGE-ITIENDGAGIPIVRSKEHKLYIPEMVFGHLLTSSNY 125
Query: 150 DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
DD + GR+GYGAKLTNI S F + + K++ + ++M + + P +S
Sbjct: 126 DDTSQNAVAGRHGYGAKLTNILSHRFSV--CCRTKGKEFHMSWHDHMRRATAPRVSNVDP 183
Query: 210 GD-NWTKVSFKPDLAKFNM--THLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
+ N T+V F PD +F + + D+ ++ KR++DLA S+++ LNG KS
Sbjct: 184 KEKNLTRVKFLPDYERFGLDANKISHDMKRVLHKRIMDLAAMF-PSIEISLNGVPFAFKS 242
Query: 267 FAEYVDMY--PKSVTRF------HERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHV 318
FA+Y +Y P S +E N +L+ G + VNG+ T GGTH
Sbjct: 243 FADYAMLYSSPSSSGEMPPAPFVYESRNGAIAFIPSLTAGTRRIFGVVNGVVTHNGGTHC 302
Query: 319 DYVANQVANHVMAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
+ A +V + V K K N + + V H + V + P FDSQ K L
Sbjct: 303 N-AAQEVLQSSLESVEKALKKDNKVIDTNRVLRHFMILVFLVQVQPKFDSQNKARLV--- 358
Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TKTEDVRGISK 431
S + + + L + +E ++ + + +L K G + + I+K
Sbjct: 359 -SVPTMPRVPRQELMDFLLRMPFLEAHVNTVTGQLADELNKEMGAGRRMSSKSLISSITK 417
Query: 432 LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
L DA TLI+TEGDSAKALA LS + GVFPLRGKLLNVR + +
Sbjct: 418 LVDATTTRRDPRFVRTLIVTEGDSAKALAQNSLSSDQKRYTGVFPLRGKLLNVRNKNLKR 477
Query: 492 VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
+ N E+ + LGL+ G Y + + LRY L++MTDQ
Sbjct: 478 LKNCKELQELFCALGLELGKIYKDAEELRYQRLLVMTDQ--------------------- 516
Query: 552 FCFMLAQDHDGSHIKGLLINFIHSFWPSLL-KIPSFLVEFITPIVKATNKNGKVLSFYSM 610
D DGSHIKGL+IN + WPSLL + P F+ F TPIVK ++ SF+S+
Sbjct: 517 -------DADGSHIKGLVINAFEALWPSLLNRNPGFISIFSTPIVKVRLRDKSTHSFFSL 569
Query: 611 PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIEL 670
++ W+++ G S++ KYYK LGTST+ EGKEYF+++ H V E + D + ++
Sbjct: 570 KEFHKWQKTHGN--VSYTAKYYKALGTSTTAEGKEYFKDMDKHTMRLVVERN-DHKLLDS 626
Query: 671 AFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMVD 727
F +++E RK W+ + + +D+ +K + DFV+KE++ F++A R++ VD
Sbjct: 627 VFDSQEVEWRKDWMTKANAYTGEVDIDRSKKTLTVPDFVHKEMVHFALAGNARALAHAVD 686
Query: 728 GLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNN 787
GLKP QRKIL+ +R+ + AKVAQ SGY+SE SA+HHGE SL TI+ MAQ+F G NN
Sbjct: 687 GLKPSQRKILWAIMRRSGNESAKVAQLSGYISEVSAFHHGEMSLQETIIKMAQNFTGGNN 746
Query: 788 INLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTW 847
INLL P GQFG+R Q G D A+ARYIFT+LS + R LFP +D+ LLDY+ E+GQQ+EP
Sbjct: 747 INLLIPEGQFGSRQQLGNDHAAARYIFTKLSSLARILFPSEDEPLLDYVTEEGQQVEPNH 806
Query: 848 YMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHPWYRGFG 903
Y+PI+P +L NGS GIG G++S IP ++P D+ A VR ++NGE ++ + PW G+
Sbjct: 807 YVPILPLLLCNGSVGIGFGFASNIPPFHPLDVSAAVRSMINGEAAKVVVRRLVPWAVGYQ 866
Query: 904 GTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI-IDQNDSFIR 962
G + + E + G + + + + E+P WT F + I + + ++
Sbjct: 867 GEVRRGPEGE----FIAAGSYQYYVDGRVHVTEIP---WTLSIEAFRDHISVLASKDVVQ 919
Query: 963 GFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTP 1022
YS VD ++ L+ +M T + LT I N +F GV+ TP
Sbjct: 920 RIADYSGANHVDIDLELTNGAM--TTYAECESELSLTQRIYI-NGTVFSPTGVL----TP 972
Query: 1023 EQ-----ILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
+ +L+ + RL+ Y+KR++ L LE EL + ++ ++F+ G+I + N
Sbjct: 973 LEGDLAPVLQWHYDRRLDLYKKRRQRNLGLLEAELAREKSTLKFVTHFREGKIDIVN--- 1029
Query: 1078 TDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLLSMA 1135
ATD++ + G+ +D YDY+L
Sbjct: 1030 ----------------------------ATDDSLAKTCSKL---GMVRVDDSYDYVLRKP 1058
Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDE 1183
I T ++ L + + +D L+K P +W+ +LD D +E
Sbjct: 1059 ITFYTKTSLENLNRKISETEKRIDKLKKTAPVQMWLDELDRFDRAFEE 1106
>sp|P12531|TOP2_TRYBB DNA topoisomerase 2 OS=Trypanosoma brucei brucei GN=TOP2 PE=3 SV=1
Length = 1221
Score = 611 bits (1576), Expect = e-173, Method: Compositional matrix adjust.
Identities = 406/1184 (34%), Positives = 613/1184 (51%), Gaps = 125/1184 (10%)
Query: 31 YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
Y+K + +EH+L RP+ YIGS++ ++IY+E+ M+ T+ GL KI DEIL+NA
Sbjct: 7 YKKLTPIEHVLTRPEMYIGSLDTTATPMFIYDEQKGHMVWETVKLNHGLLKIVDEILLNA 66
Query: 91 ADN-KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNY 149
+DN R +M ++V I + I++ N G G+P+ +E +Y+PE++FGHLLTSSNY
Sbjct: 67 SDNISNRSARMTYIRVTITDTGE-ITIENDGAGIPIVRSREHKLYIPEMVFGHLLTSSNY 125
Query: 150 DDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKE 209
DD+ + GR+GYGAKLTNI S F + R ++ + ++M K + P +S
Sbjct: 126 DDDNQNAVAGRHGYGAKLTNILSLSFSVCCRTNGR--EFHMSWQDHMRKATAPRVSNVGT 183
Query: 210 GD-NWTKVSFKPDLAKFNMTH--LEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKS 266
+ N T+V F PD +F M + +D+ ++ KR++DL+ ++++ LNG KS
Sbjct: 184 KEKNVTRVKFLPDYERFGMKEKKISNDMKRVLYKRIMDLSAMF-PNIQITLNGSSFGFKS 242
Query: 267 FAEYVDMY----PKSVTRFHERVNERWEICV----TLSEGQFQQVSFVNGIATIKGGTHV 318
F +Y +Y PK V E CV ++ G + VNG+ T GGTH
Sbjct: 243 FKDYATLYSAMTPKGEKPPPPYVYESKSGCVAFIPSVVPGVRRMFGVVNGVVTYNGGTHC 302
Query: 319 DYVANQVANHVMAVVNK--KNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQ 376
+ A + + V + K +N + + V H + V + P FDSQ K L
Sbjct: 303 N-AAQDILTGCLDGVERELKKENKVMDTNRVLRHFTILVFLVQVQPKFDSQNKARLV--- 358
Query: 377 SSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTED-----VRGISK 431
S + + + + K + +E +S + +++L K GT + I+K
Sbjct: 359 -STPTMPRVPRQDVMKYLLRMPFLEAHVSTITGQLAQELNKEIGTGRRMSSKTLLTSITK 417
Query: 432 LEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQ 491
L DA TLI+TEGDSAKALA LS + GVFPLRGKLLNVR + +
Sbjct: 418 LVDATSTRRDPKHTRTLIVTEGDSAKALAQNSLSSDQKRYTGVFPLRGKLLNVRNKNLKR 477
Query: 492 VLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
+ N E+ + LGL+ +Y + LRY ++IMTDQ
Sbjct: 478 LRNCKELQELFCALGLELDKDYTDADELRYQRILIMTDQ--------------------- 516
Query: 552 FCFMLAQDHDGSHIKGLLINFIHSFWPSLL-KIPSFLVEFITPIVKATNKNGKVLSFYSM 610
D DGSHIKGL+IN S WPSLL + P F+ F TPIVKA ++ V+SF+SM
Sbjct: 517 -------DADGSHIKGLVINAFESLWPSLLVRNPGFISIFSTPIVKARLRDKSVVSFFSM 569
Query: 611 PDYEAWKESLGGNASS-WSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
++ W+ S NA++ ++ KYYKGLGTST+ EGKEYF+++ H + D D + ++
Sbjct: 570 KEFHKWQRS---NANTPYTCKYYKGLGTSTTAEGKEYFKDMEKHTMRLL-VDRSDHKLLD 625
Query: 670 LAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPSMV 726
F +++E RK W+ + F +D+ +K + +DFV+KE++ F++ R++ V
Sbjct: 626 NVFDSQEVEWRKDWMTKANAFTGEVDIDRSKKMLTVTDFVHKEMVHFALVGNARALAHSV 685
Query: 727 DGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSN 786
DGLKP QRKI++ +R+ + AKVAQ SGY+SE SA+HHGE SL T++ MAQ F G N
Sbjct: 686 DGLKPSQRKIIWALMRRSGNEAAKVAQLSGYISEASAFHHGETSLQETMIKMAQSFTGGN 745
Query: 787 NINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPT 846
N+NLL P GQFG+R Q G D A+ RYIFT+LS + R LFP +DD LLDY+ E+GQQ+EP
Sbjct: 746 NVNLLVPEGQFGSRQQLGNDHAAPRYIFTKLSKVARLLFPSEDDPLLDYIVEEGQQVEPN 805
Query: 847 WYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE----MMEPMHPWYRGF 902
Y+PI+P +L NGS GIG G+SS IP ++ D+ A VR +++GE ++ + PW GF
Sbjct: 806 HYVPILPLLLCNGSVGIGFGFSSNIPPFHRLDVSAAVRAMISGERAKSVVRRLVPWAVGF 865
Query: 903 GGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESI-IDQNDSFI 961
G I + E + G + + ELP WT F E I +
Sbjct: 866 QGEIRRGPEGE----FIAVGTYTYCKGGRVHVTELP---WTCSVEAFREHISYLATKDIV 918
Query: 962 RGFRQYSDDTTVDFEVFLSEESMMRTKQE-----GLLKKFKLTTTISTSNMHLFDSKGVI 1016
YS VD +V +++ + + T E GL ++ + T+ + N L +
Sbjct: 919 NRIADYSGANHVDIDVEVAQGA-VNTYAECESELGLTQRIHINGTVFSPNGTL----SPL 973
Query: 1017 KKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRK 1076
+ TP +L+ + RL+ Y+KR++ L LE EL + ++ ++F+ G I N
Sbjct: 974 ESDLTP--VLQWHYDRRLDLYKKRRQRNLTLLEQELAREKSTLKFVQHFGAGHIDFAN-- 1029
Query: 1077 RTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID--YDYLLSM 1134
TE + E G+ +D +DY+L
Sbjct: 1030 --------------------------------ATEATLEKVCSKLGLVRVDDSFDYILRK 1057
Query: 1135 AIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALD 1178
I T + LL + ++ L+K TP LW+ +LD D
Sbjct: 1058 PITFYTKTSFENLLKKIAETERRIEALKKTTPVQLWLGELDQFD 1101
>sp|O61078|TOP2_LEICH DNA topoisomerase 2 OS=Leishmania chagasi GN=TOP2 PE=3 SV=2
Length = 1236
Score = 598 bits (1542), Expect = e-169, Method: Compositional matrix adjust.
Identities = 393/1199 (32%), Positives = 629/1199 (52%), Gaps = 125/1199 (10%)
Query: 26 TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
T Y+K + ++H+LLRP+ Y+GSIE ++I++ E M+ T+ GL KI DE
Sbjct: 2 TYASKYKKLTPIDHVLLRPEMYVGSIETQPTPMYIFDPEKGRMVWETMRVNQGLLKIVDE 61
Query: 86 ILVNAADN---KQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
IL+NAADN + + + + I + I+V N G G+P+ +E +Y+PE++FGH
Sbjct: 62 ILLNAADNINNSKGSVRQTYISIHISDTGE-ITVENDGAGLPIVRSREHKMYIPEMVFGH 120
Query: 143 LLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEF-IIETADGKRLKKYKQVFTNNMGKKSE 201
LLTSSNY+++ TT GR+GYGAKLTNI ST+F ++ DG+ + +T++M +
Sbjct: 121 LLTSSNYNNDSTSTTAGRHGYGAKLTNILSTKFSVVCRTDGR---ESHMSWTDHMRMATA 177
Query: 202 PNISKCKEGD-NWTKVSFKPDLAKFNMTH--LEDDVVALMKKRVVDLAGCLGKSVKVELN 258
P +++ + + T+V F PD A F + + D+ ++ KR++DLA K ++V LN
Sbjct: 178 PRVNRVDPKEKSVTRVKFMPDYAHFGFPNASISLDMKRVLHKRIMDLAAMFSK-IEVRLN 236
Query: 259 GHRVPVKSFAEYVDMY----------PKSVTRFHERVNERWEICVTLSEGQFQQVSFVNG 308
++F +Y +Y P+ + N L++ + V VNG
Sbjct: 237 NVPFGFRTFTDYARLYSLPGLDGSMPPEPFV--YTSPNGSVAYVPQLTQSPKRIVGVVNG 294
Query: 309 IATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHN-VKNHLWVFVNALIDNPAFDSQ 367
+ T GGTH + + + + + ++ KN V N V+ H V V + P FDSQ
Sbjct: 295 VVTYNGGTHCNAAMDILDSCLDSLSKNFKKNGKVVDTNRVQRHFTVLVFLIQTQPKFDSQ 354
Query: 368 TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDG-----TK 422
+K L S + + + L+K + +E ++ + + + +L K G +
Sbjct: 355 SKARLV----STVTMPRMPKNTLEKYLERMPFLEAHVNSMDDQLANELNKEIGAGRRLSS 410
Query: 423 TEDVRGISKLEDANLA--GGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGK 480
+ I+KL DA + GRN TLI+TEGDSAKALA+ LS + GVFPLRGK
Sbjct: 411 KTLISAITKLVDATSSQPDGRNIR--TLIITEGDSAKALALNSLSSEQKKYCGVFPLRGK 468
Query: 481 LLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLL 540
LLNVR + ++ + ++ LGL+ G EY + LRY L++MTDQ
Sbjct: 469 LLNVRNKNLKRLKTCKGLQDLFLSLGLELGKEYRSPAELRYQRLLVMTDQ---------- 518
Query: 541 WFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKI-PSFLVEFITPIVK--A 597
D DGSHIKGL+IN S WP LL+ P ++ F TPIVK
Sbjct: 519 ------------------DADGSHIKGLVINAFESLWPKLLQNNPGYISLFSTPIVKIKV 560
Query: 598 TNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDF 657
+ K+ +V++F+S D+ W+ + ++ ++ KYYKGLGTST+ EGKEYF ++ +
Sbjct: 561 SGKSKEVIAFHSFRDFHRWQRA--HPSARYTAKYYKGLGTSTTAEGKEYFADMEKNIMQL 618
Query: 658 VWEDDQDGEAIELAFSKKKIEARKKWLLQ---FEPGNHLDQKEKYIKYSDFVNKELILFS 714
D +D + ++ F ++E RK+W+ + F+ +D+ +K + +FV+KE++ F+
Sbjct: 619 T-VDARDHQLLDSVFDAAEVEWRKEWMTKANAFQGEVDIDRSKKTLTIPEFVHKEMVHFA 677
Query: 715 MADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLAST 774
+ R+IP VDGLKP QRKIL+ +R+ + +KVAQ SGY+SE SA+HHGE SL T
Sbjct: 678 LVGNARAIPHCVDGLKPSQRKILWAMLRRHNSEASKVAQLSGYISEASAFHHGEASLQET 737
Query: 775 ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
I+ MAQ+F G NNINLL P GQFG+R Q G D A+ RYIFT+LS R LFP++DD LLD
Sbjct: 738 IVKMAQNFTGGNNINLLVPEGQFGSRQQLGNDHAAPRYIFTKLSRFGRLLFPEEDDPLLD 797
Query: 835 YLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGE---- 890
Y++E+G +EP Y+PI+P +L NG+ GIG G+++ IP+++P D+ A VR ++NGE
Sbjct: 798 YMDEEGTFVEPHHYVPILPMLLCNGAVGIGFGFATTIPSFHPLDVSAAVRAMINGESAKQ 857
Query: 891 MMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFL 950
++ + PW GF GT+ + E + G I E+P + +R +
Sbjct: 858 VVRNLVPWAVGFQGTVRRGPDNE----FIAVGKYTAHPNGRFHISEIPWMTSIEAFRLHI 913
Query: 951 ESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLF 1010
S+ + ++ YS +D ++ + + S+ T L I N +F
Sbjct: 914 SSLASAD--VVQRIADYSGANHIDIDLIVRDGSL--TTWAECETDLALAQRIYI-NGTVF 968
Query: 1011 DSKGVIKKYDTP-EQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGE 1069
G + D+ +L+ + RL+ Y++R+ ++ ++++L +L++ +F+ G+
Sbjct: 969 SPTGTLSPIDSDLSPVLQWHYDRRLDLYKRRRTRKIGLMKMDLARLQSTRKFVEHFRQGQ 1028
Query: 1070 IVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEENPEVVNGVQSID-- 1127
I D L ATD+T V G+ +D
Sbjct: 1029 I--------DFL-----------------------NATDDTLHKT---CVKLGLVRVDES 1054
Query: 1128 YDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQLDELDK 1186
+DY+L I T + L AD K ++++L++ TP +W+ +LD D E ++
Sbjct: 1055 FDYILKKPITFFTRTSTEKLQADIAKTQAQIEELKRTTPVKMWLTELDKFDKTFQEYER 1113
>sp|Q9QSK1|TOP2_IIV6 DNA topoisomerase 2 OS=Invertebrate iridescent virus 6 GN=TOP2 PE=3
SV=1
Length = 1132
Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust.
Identities = 389/1212 (32%), Positives = 616/1212 (50%), Gaps = 156/1212 (12%)
Query: 31 YQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNA 90
Y S ++H+LLRP+ IGS Q ++ +E ++ + + L +IF E+L NA
Sbjct: 10 YTTLSDIDHVLLRPEVIIGSTVPMEQTEYVVDENFSEILEKQVFVSEALIRIFVEVLANA 69
Query: 91 ADNKQRD----PKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEG---------VYVPE 137
DN R ++K+ I+ + + +HN G + + + +G VY E
Sbjct: 70 VDNIHRSKGSSTPCKSIKIKIEDDGTTM-IHNDGQVIKISKEENDGIEINGKKCSVYNHE 128
Query: 138 LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
L+FGHL +SSNYDD V + T G+NG G K TNI S F + D + KK+ Q +TNNM
Sbjct: 129 LVFGHLRSSSNYDDTVVRQTSGKNGLGVKCTNILSKSFKVIGVDPENKKKFVQEWTNNMK 188
Query: 198 KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLG-KSVKVE 256
+ S P ++ +T+V + PD + + + D++ + +K V+D+A + V V
Sbjct: 189 ETSGPKVTTSSSKTGYTEVIYCPDFER--LGNFSSDIIGIFRKHVLDVAMLASSEGVSVY 246
Query: 257 LNGHRVPVKSFAEYVDMYP---KSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIK 313
N ++P+K F++Y ++ +S++ E + I +G+ + +SFVNG+ T
Sbjct: 247 FNDKKLPIKKFSDYTKLFKLEKESISITEEDGSSEVTIAFVERDGKKKPISFVNGLFTKH 306
Query: 314 GGTHVDYVANQVANHVMAVVNKKNK---NANVKAHNVKNHLWVFVNALIDNPAFDSQTKE 370
GG HVD ++++V+NK +K + + +V + FV + +D P FD Q K
Sbjct: 307 GGQHVDGWTKPFFANLLSVLNKPSKTYKDLKLSLKDVTPYFRFFVKSTVDKPQFDCQNKN 366
Query: 371 TLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVR--- 427
L S K + ++ + KV + + E L ++F++ K N+ KT + +
Sbjct: 367 ML----KSPCLKYTIPDKIITKVCKWTSVQE--LKQSSFEKLLKGKDNNIIKTLNDKKRR 420
Query: 428 ---GISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSV----------VGRDRFGV 474
+ + + AN AG SE+CTLI+ EG SAK A+AG+S GRD FG+
Sbjct: 421 PKVSVKEYDPANKAGTTLSEKCTLIVCEGLSAKTYAVAGISTGISFTGTDTKKGRDWFGI 480
Query: 475 FPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYN---NVKSLRYGHLMIMTDQV 531
PLRGK LNVR A++++++ N+ + ++ +GL G++Y+ + KSL YG ++I+ D
Sbjct: 481 LPLRGKFLNVRNANNDKMIKNTVVTDLVNAMGLTFGMDYSTQKSRKSLNYGSIIIIPDP- 539
Query: 532 LLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK--IPS---- 585
D DG HI+GL++NF H + SL +P+
Sbjct: 540 ---------------------------DEDGIHIEGLVLNFFHHHFSSLFNPVVPNLKDF 572
Query: 586 -FLVEFITPIVKATNK---NGKVLSFYSMPDYEAWKESLGGNASSWS----IKYYKGLGT 637
F+ PI+K K + + F++ + +K N + W IKY+KGLGT
Sbjct: 573 PFISSMKIPIIKVIEKPLKGRREIEFFTHEAFHKFK-----NENKWHKNHEIKYFKGLGT 627
Query: 638 STSKEGKEYFQNITLHKKDFVWE-DDQDGEAIELAFSKKKIEARKKWLLQFEPGNH---L 693
+ ++ + F KK V+ DD E +E AF ++ + RK+WL Q+ P L
Sbjct: 628 TKHEDVPKIFG-----KKMVVFNIDDNAHENMEKAFKDEEADERKEWLKQYNPNARTFDL 682
Query: 694 DQKEKYIKY--SDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKV 751
D K ++ S F+N+ELI FS+ D +RS+P ++DGLK QRK++F + N KV
Sbjct: 683 DSPNKILQLNISTFINEELIKFSIEDCKRSLPHLIDGLKESQRKVIFGLKQWNGKNNIKV 742
Query: 752 AQFSGYVSEHSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASAR 811
AQ +V++ + Y HGEQ+L TI+ MAQ FVG+NNI LL+ +GQFGTR GGKDAAS R
Sbjct: 743 AQLGAFVAQKTDYKHGEQNLFDTIIKMAQTFVGANNIPLLEEDGQFGTRLSGGKDAASPR 802
Query: 812 YIFTRLSPITRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYI 871
YIF PI +F +DD +L+Y DG EP +Y P+IP + +NGS G+GTG+S I
Sbjct: 803 YIFVNQPPILNKIFRPEDDPILNY-TLDG---EPVFYAPVIPLICINGSVGVGTGFSCNI 858
Query: 872 PNYNPRDIVANVRRLLN----GE-MMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEE 926
P +NP +I+ +++ +N GE + PWY+GF G IEK S T++
Sbjct: 859 PMFNPSEIIDGLKQWINMREQGEKYVFKYKPWYKGFTGKIEKNGSGRYISYGTLSNEASN 918
Query: 927 VNETTLRIKELPIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMR 986
+ ELPI WT ++E + + N I+ YS+ TTV+F++
Sbjct: 919 NGMYQYTVSELPINMWTDKFKEMCDQYRESN--LIKTCDNYSEVTTVNFKI--------S 968
Query: 987 TKQEGLLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLE 1046
++ E ++ KL + I TSNM +FD +G I KY+T I++ F R++ YEKR++ L+
Sbjct: 969 SEHELTIENLKLRSYIHTSNMVMFDHEGKIHKYETLNGIMQRFCKERIKIYEKRRQYMLQ 1028
Query: 1047 NLELELLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGA 1106
L L ENK RF+ V+N +I + LL E E V
Sbjct: 1029 KLNKSLTISENKKRFMEDVMNQKIKI-------LLQE---------------DEVVHQQL 1066
Query: 1107 TDETEESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATP 1166
D ++ E +DYLL+M IG + V L++ D L +++
Sbjct: 1067 LDMNYYKDDEGE---------FDYLLNMNIGGFRKKNVDKLISKIDDLKKDIMWYTNTNE 1117
Query: 1167 ESLWVKDLDALD 1178
+W+KD+ L+
Sbjct: 1118 GQMWLKDILELE 1129
>sp|Q196X4|TOP2_IIV3 DNA topoisomerase 2 OS=Invertebrate iridescent virus 3 GN=IIV3-086L
PE=3 SV=1
Length = 1113
Score = 524 bits (1349), Expect = e-147, Method: Compositional matrix adjust.
Identities = 381/1206 (31%), Positives = 587/1206 (48%), Gaps = 163/1206 (13%)
Query: 28 EEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEIL 87
+ Y K+ ++H+L D YIG ++ W++++ ++ R + L +IF E+L
Sbjct: 6 HQKYTIKNDIQHVLDCSDVYIGDTAPTARSEWMFDDAVNQIVWRPTTTPEALVRIFVEVL 65
Query: 88 VNAADNKQRDPK-----MDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGV--------- 133
NA DN +R +KV +D + SV N G +PV + + GV
Sbjct: 66 TNAVDNIERSINGGHELCKNIKVDVDLKTGKTSVWNDGQVIPVVKNCDNGVVQPPPPTTE 125
Query: 134 ------------YVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 181
Y+ +IFGH TSSNYD+ + +G +NG G K TNIFS+ F + D
Sbjct: 126 QDRLAYEKLNREYIHTIIFGHFRTSSNYDNETDQVSG-KNGVGVKCTNIFSSWFSVVGVD 184
Query: 182 GKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKR 241
R K+ Q + +NM K P + KC +T V + PD A+F + +DV ++ KK
Sbjct: 185 PDRKLKFSQEWRSNMTKSGAPQVVKCALKTGYTLVEYVPDFARFKLKSYPEDVESIFKKL 244
Query: 242 VVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYPKSVTRFHERVNERWE---ICVTLSEG 298
VVD A + NG R VK+ Y +Y + V ++ + V S
Sbjct: 245 VVD-ASAFFPNTAFFFNGERTVVKNAVAYAKLYYNLNETAVDSVVIDYKDSKVVVVGSAT 303
Query: 299 QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNAL 358
VSFVNG T GG HV + + ++A +N K KN ++ ++ + +F+++
Sbjct: 304 PLPPVSFVNGQITPAGGQHVTNWSRVIFGALLAALNGK-KNVSLTKADIAPYFQLFIHSK 362
Query: 359 IDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLS-WANFKQSKDLKK 417
+ P FD Q K L S + L LKK+ K I+ T+ K+ LKK
Sbjct: 363 VSKPKFDGQNKNCL----KSPKVEAHLDATILKKML-KWKIISTIQDKVVKSKEYLALKK 417
Query: 418 NDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGL-----SVVGRDRF 472
+ +T V+ + + AN G LI+ EG SAK+ A+AG+ + GR F
Sbjct: 418 IECRRTPIVK-VDGYDQANRLG----PDSVLIVCEGLSAKSYAVAGIQKGLFNKKGRTYF 472
Query: 473 GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEY---NNVKSLRYGHLMIMTD 529
G+ PLRGK LNV+ + ++ N + + K+L LK ++Y N +L YG L+I+TD
Sbjct: 473 GILPLRGKFLNVKNTTPLKIGQNKVVSDFIKVLNLKFNLDYRKATNYATLNYGTLLILTD 532
Query: 530 QVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVE 589
D DG HIKGL++N IH +P+L F+
Sbjct: 533 A----------------------------DKDGIHIKGLILNLIHELFPTLFHRQGFIYS 564
Query: 590 FITPIVKATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQN 649
TPIVK +K G+ FY +E W+ + KYYKGLGT + +F +
Sbjct: 565 METPIVKILHKKGQPTLFYDENSFEDWRAQ---HPELKHFKYYKGLGTIGPADVAAFFGS 621
Query: 650 ITLHKKDFVWEDDQDGEAIELAFSKKKIEARKKWLLQFEPG------NHLDQKEKYIKYS 703
+ D+ A+ F + RK+WL +F P +H + +K S
Sbjct: 622 KVVRYH----YDEATDAAVNSVFKDENANERKEWLGRFNPRVSQWCLDHHREAVIDLKIS 677
Query: 704 DFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFC---SFKRNFIKEAKVAQFSGYVSE 760
DF++ E+I FS D +RS+ S +DG K QRKI++ F+ N + KVAQ SGYV+E
Sbjct: 678 DFMHHEMIKFSYEDCRRSLASCIDGFKESQRKIIYAVRKKFRSNSTEFIKVAQLSGYVAE 737
Query: 761 HSAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPI 820
+ Y HGEQ+L TI+ AQDFVG+NN+ LL+P+GQFGTR +GGKD+A+ RYI+T+ I
Sbjct: 738 QTDYKHGEQNLCETIVKFAQDFVGANNVQLLEPDGQFGTRLEGGKDSAAPRYIYTKPHKI 797
Query: 821 TRFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIV 880
++F ++DD +L E + EP ++PIIP VLVNGS GIGTGWS ++P YNP +++
Sbjct: 798 LPYIFREEDDPIL----EQSSEGEPVHFVPIIPLVLVNGSVGIGTGWSCFVPQYNPLELI 853
Query: 881 ANVRRLL---NGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKEL 937
+ L + E + P PWYR F G + T + +T G +++V+ T+R+ EL
Sbjct: 854 RYIEARLTSQDSEALLPAKPWYRNFTGKVAATGPGK----FTTFGRMKQVDADTVRVTEL 909
Query: 938 PIRRWTQDYREFLESIIDQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKFK 997
P+ WT +++ S+I+ +Q +++TV +K + LKK +
Sbjct: 910 PVGMWTDRFKDQCYSLIESGQ-----LQQLVNESTV-------------SKVDFTLKKLQ 951
Query: 998 ------LTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
LTTT+ T+NM LFD + VI KYDT IL+ +F RL FY+ RK + L+
Sbjct: 952 DISALKLTTTLHTTNMVLFDRENVITKYDTIGDILDHYFQTRLAFYKVRKNHTIAQLKNT 1011
Query: 1052 LLKLENKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETE 1111
+ E K++FI V+ LRQ + +I +++
Sbjct: 1012 IQHNETKLKFIEKVLTDHSF------------LRQ--------DDAAIVSIL-------- 1043
Query: 1112 ESEENPEVVNGVQSIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWV 1171
E E +V N Y+YLL+++I + T V+ L + L E + +++ +W
Sbjct: 1044 EKENFLKVDNS-----YNYLLNISIRSCTATAVEKLQSTIKGLTESLIRVQQTPTRQMWY 1098
Query: 1172 KDLDAL 1177
+L L
Sbjct: 1099 DELQQL 1104
>sp|P0C9C0|TOP2_ASFP4 DNA topoisomerase 2 OS=African swine fever virus (isolate Tick/South
Africa/Pretoriuskop Pr4/1996) GN=Pret-124 PE=3 SV=1
Length = 1192
Score = 313 bits (803), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 320/1218 (26%), Positives = 535/1218 (43%), Gaps = 193/1218 (15%)
Query: 69 IHRTISYVPGLYKIFDEILVNAADNKQ----RDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
IHR + P L KIFDEI+VNA D+++ + K+ +K+ D+ + S N G G+P
Sbjct: 46 IHR--DHCPALLKIFDEIIVNATDHERACHSKTKKVTYIKISFDK--GVFSCENDGPGIP 101
Query: 125 VEIHQEEG------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
+ H++ VYVPE+ H L +N + GG NG G KL + S I+
Sbjct: 102 IAKHEQASLIAKRDVYVPEVASCHFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILT 161
Query: 179 TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHL-----EDD 233
TADG +KY Q + P I+ +E +T++ P + + D
Sbjct: 162 TADGA--QKYVQHINQRLDIIEPPTITPSRE--MFTRIELMPVYQELGYAEPLSETEQAD 217
Query: 234 VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP--------------KSVT 279
+ A + R A +GK + N S MY K+
Sbjct: 218 LSAWIYLRACQCAAYVGKGTTIYYNDKPCRTGSVMALAKMYTLLSAPNSTIHTATIKADA 277
Query: 280 RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK--KN 337
+ + + V+ +F+ VS +NG+ +K G HV ++ + V+ + K+
Sbjct: 278 KPYSLHPLQVAAVVSPKFKKFEHVSVINGVNCVK-GEHVTFLKKTINEMVVKKFQQTIKD 336
Query: 338 KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKS 397
KN + +++++ + I + Q K+ L++ ++ F + + FL +T
Sbjct: 337 KNRKTTLRDSCSNIFIVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTSMT--K 394
Query: 398 GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAK 457
IV+ LL + + K D K DV K A AGG+ ++ C L+ EGDSA
Sbjct: 395 SIVDILL--------QSISKKDNHKQVDV---DKYTRARNAGGKRAQDCMLLAAEGDSAL 443
Query: 458 ALAMAGLSVVGR--------DRFGVFPLRGKLLNVREASSN--------------QVLNN 495
+L GL+ +G+ D G+ L G ++N + +N Q+ NN
Sbjct: 444 SLLRTGLT-LGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNN 502
Query: 496 SEIGNIKKILGLKQGVEYNNVK---SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
+ I ++LGL Y + LRYG ++ D
Sbjct: 503 KVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVD----------------------- 539
Query: 553 CFMLAQDHDGS-HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV-LSFYSM 610
QD DG I GLL+ + H FWP L+ I F+ +TP+++ K V + FY
Sbjct: 540 -----QDLDGCGKILGLLLAYFHLFWPQLI-IHGFVKRLLTPLIRVYEKGKTVPVEFYYE 593
Query: 611 PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---DDQDGEA 667
+++AW + A+ ++KYYKGL + E K F+ H + V+ DD E
Sbjct: 594 QEFDAWAKKQTSLANH-TVKYYKGLAAHDTHEVKSMFK----HFDNMVYTFTLDDSAKEL 648
Query: 668 IELAFSKKKIEARKKWLLQ-----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
+ F + E RK+ L E + I S + + + + ++R I
Sbjct: 649 FHIYFGGES-ELRKRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQI 707
Query: 723 PSMVDGLKPGQRKILF----CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
P+ +DG+ +RKIL C N +E KV QF GYV++H YHHG+ SL ++I+
Sbjct: 708 PNFLDGMTRARRKILAGGVKCFASNN--RERKVFQFGGYVADHMFYHHGDMSLNTSIIKA 765
Query: 779 AQDFVGSNNIN-LLQPNGQFGTRNQGGKDAASARYIFTRL-SPITRFLFPKDDDKLLDYL 836
AQ + GS+++ + G FG+R+ GGKDA S RYI +L S + +FP +D LL Y+
Sbjct: 766 AQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPYV 825
Query: 837 NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-----GEM 891
EDGQ+ EP +Y+P++P ++ GW DI+A VR ++ E+
Sbjct: 826 FEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKNNPKHEL 885
Query: 892 ME----------PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
+ P+ P F G +++ + +Y I E+ N T I ELP+R
Sbjct: 886 LHYAIKHKITILPLRPSNYNFKGHLKRFG--QYYYSYGTYVISEQRNIIT--ITELPLRV 941
Query: 942 WTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR-------TKQEGL 992
T Y +ESI ++ +FI YS T++ V L S+ R T+++
Sbjct: 942 PTVAY---IESIKKSSNRMTFIEEIIDYSSSETIEILVKLKPNSLNRIMEEFKCTEEQDS 998
Query: 993 LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
++ F S+++ KG I +++T +IL + R E Y+KR + L+L +
Sbjct: 999 IENFLRLRNCLHSHLNFVKPKGGIIEFNTYYEILYAWLPYRRELYQKRLMREHAVLKLRI 1058
Query: 1053 LKLENKVRFI--LGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDET 1110
+ VR+I +N + ++ + +L E GF P + +++
Sbjct: 1059 IMETAIVRYINESAELNLSHYEDEKEASRILSE---HGFPPLNQT-----LIISPEFASI 1110
Query: 1111 EESEENPEVVNGVQSIDYDYLLSM-------AIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
EE N + + G Y Y+LS+ A T +EK++ + A DK V+ L +
Sbjct: 1111 EEL--NQKALQGC----YTYILSLQARELLIAAKTRRVEKIKKMQARLDK----VEQLLQ 1160
Query: 1164 ATP---ESLWVKDLDALD 1178
+P S+W++++DA++
Sbjct: 1161 ESPFPGASVWLEEIDAVE 1178
>sp|P0C9C2|TOP2_ASFK5 DNA topoisomerase 2 OS=African swine fever virus (isolate
Pig/Kenya/KEN-50/1950) GN=Ken-124 PE=3 SV=1
Length = 1192
Score = 313 bits (803), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 321/1219 (26%), Positives = 538/1219 (44%), Gaps = 195/1219 (15%)
Query: 69 IHRTISYVPGLYKIFDEILVNAADNKQ----RDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
IHR + P L KIFDE++VNA D+++ + K+ +K+ D+ + S N G G+P
Sbjct: 46 IHR--DHCPALLKIFDELIVNATDHERACHNKTKKVTYIKISFDK--GVFSCENDGPGIP 101
Query: 125 VEIHQEEG------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
+ H++ VYVPE+ + L +N + GG NG G KL + S I+
Sbjct: 102 IVKHEQASLIAKRDVYVPEVASCYFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILT 161
Query: 179 TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHL-----EDD 233
TADG +KY Q + P I+ +E +T++ P + + D
Sbjct: 162 TADGA--QKYVQHINQRLDNIEPPTITPSRE--MFTRIELMPVYQELGYAQPLSETEQAD 217
Query: 234 VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMY-----PKSVTRFHERVN-- 286
+ A + R A +GK + N S MY P S T + +
Sbjct: 218 LSAWIYLRACQCAAYVGKGTTIYYNDKPCSTSSVMALAKMYTLVTAPNS-TIYTTTIKAD 276
Query: 287 ------ERWEICVTLSEG--QFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK--K 336
++ +S +F+ VS +NG+ +KG HV ++ + V+ + K
Sbjct: 277 AKPYSLHPLQVAAVVSPKFKKFEHVSIINGVNCVKG-EHVTFLKKAINEMVVKKFQQTVK 335
Query: 337 NKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAK 396
+KN + ++++V + I + Q K+ L++ ++ F + + FL +T
Sbjct: 336 DKNRKTTLRDSCSNIFVVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTSMT-- 393
Query: 397 SGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSA 456
IV+ LL + + K D K DV K A AGG+ ++ C L+ EGDSA
Sbjct: 394 RSIVDILL--------QSISKKDNHKQIDV---DKYTRARNAGGKKAQDCMLLAAEGDSA 442
Query: 457 KALAMAGLSVVGR--------DRFGVFPLRGKLLNVREASSN--------------QVLN 494
+L AGL+ +G+ D G+ L G ++N + +N Q+ N
Sbjct: 443 LSLLRAGLT-LGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTN 501
Query: 495 NSEIGNIKKILGLKQGVEYNNVK---SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITT 551
N + I ++LGL Y + LRYG ++ D
Sbjct: 502 NKVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVD---------------------- 539
Query: 552 FCFMLAQDHDGS-HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV-LSFYS 609
QD DG I GLL+ + H FWP L+ + F+ +TP+++ K V + FY
Sbjct: 540 ------QDLDGCGKILGLLLAYFHLFWPQLI-VHGFVKRLLTPLIRVYEKGNTVPVEFYY 592
Query: 610 MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWEDDQDGEAIE 669
+++AW + A+ ++KYYKGL + E K F++ F DD E
Sbjct: 593 EQEFDAWAKKQTSLANH-TVKYYKGLAAHDTHEVKSMFKHFDKMVYTFTL-DDSAKELFH 650
Query: 670 LAFSKKKIEARKKWLLQ-----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSIPS 724
+ F + E RK+ L E + I S + + + + ++R IP+
Sbjct: 651 IYFGGES-ELRKRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQIPN 709
Query: 725 MVDGLKPGQRKILF----CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMAQ 780
+DG+ +RKIL C N +E KV QF GYV++H YHHG+ SL ++I+ AQ
Sbjct: 710 FLDGMTRARRKILAGGLKCFASNN--RERKVFQFGGYVADHMFYHHGDMSLNTSIIKAAQ 767
Query: 781 DFVGSNNIN-LLQPNGQFGTRNQGGKDAASARYIFTRL-SPITRFLFPKDDDKLLDYLNE 838
+ GS+++ + G FG+R+ GGKDA S RYI +L S + +FP +D LL Y+ E
Sbjct: 768 YYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPYVFE 827
Query: 839 DGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-----GEMME 893
DGQ+ EP +Y+P++P ++ GW DI+A VR ++ E++
Sbjct: 828 DGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYIDKNNPKHELLH 887
Query: 894 ----------PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWT 943
P+ P F G +++ + +Y + E+ N T I ELP+R T
Sbjct: 888 YAIDHKITVLPLRPSNYNFKGHLKRFG--QYYYSYGTYVVSEQRNMIT--ITELPLRVPT 943
Query: 944 QDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR-------TKQEGLLK 994
Y +ESI ++ +FI YS T++ V L S+ R T+++ ++
Sbjct: 944 VAY---IESIKKSSNRMAFIEEIVDYSSSETIEILVKLKPNSLSRIIEEFKETEEQNSIE 1000
Query: 995 KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
F S+++ KG I ++++ +IL + R + Y+KR + L+L ++
Sbjct: 1001 NFLRLRNCLHSHLNFVKPKGGIIEFNSYYEILYAWLPYRRDLYQKRLMRERAVLKLRIIM 1060
Query: 1055 LENKVRFI-----LGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDE 1109
VR+I L + + E + K +L + GF P ++S+ AT E
Sbjct: 1061 ETAIVRYINESADLNLSHYE----DEKEAGRILS--EHGFPPL---NQSLITSPEFATIE 1111
Query: 1110 TEESEENPEVVNGVQSIDYDYLLSM-------AIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
E N + + G Y Y+LS+ A T +EK++ + A DK V+ L
Sbjct: 1112 ----ELNQKALQGC----YTYILSLQARELLIAAKTRRVEKIKKMQARLDK----VEQLL 1159
Query: 1163 KATP---ESLWVKDLDALD 1178
+ +P S+W++++DA++
Sbjct: 1160 QESPFPGASVWLEEIDAVE 1178
>sp|P34203|TOP2_ASFM2 DNA topoisomerase 2 OS=African swine fever virus (isolate
Tick/Malawi/Lil 20-1/1983) GN=Mal-120 PE=3 SV=1
Length = 1191
Score = 312 bits (800), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 320/1221 (26%), Positives = 540/1221 (44%), Gaps = 200/1221 (16%)
Query: 69 IHRTISYVPGLYKIFDEILVNAADNKQ----RDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
IHR + P L KIFDE++VNA D+++ + K+ +K+ D+ + + N G G+P
Sbjct: 46 IHR--DHCPALLKIFDELIVNATDHERACHSKTKKVTYIKISFDK--GVFACENDGPGIP 101
Query: 125 VEIHQEEG------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
+ H++ VYVPE+ H L +N + GG NG G KL + S I+
Sbjct: 102 IAKHEQASLIAKRDVYVPEVASCHFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILT 161
Query: 179 TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHL-----EDD 233
TADG +KY Q + P I+ +E +T++ P + + D
Sbjct: 162 TADGA--QKYVQHINQRLDIIEPPTITPSRE--MFTRIELMPVYQELGYAQPLSETEQAD 217
Query: 234 VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP--------------KSVT 279
+ A + R A +GK + N S MY K+
Sbjct: 218 LSAWIYLRACQCAAYVGKGTTIYYNDKPCNTGSVMALAKMYTLLSAPNSTIHTTAIKADA 277
Query: 280 RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK--KN 337
+ + + V+ +F+ VS +NG+ +K G HV ++ + V+ + K+
Sbjct: 278 KPYSLHPLQVAAVVSPKFKKFEHVSIINGVNCVK-GEHVTFLKKTINEMVVKKFQQTIKD 336
Query: 338 KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKS 397
KN + ++++V + I + Q K+ L++ ++ F + + FL +T
Sbjct: 337 KNRKTTLRDSCSNIFVVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTNMT--R 394
Query: 398 GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAK 457
IV+ LL + + K D K DV K AN AGG+ ++ C L+ EGDSA
Sbjct: 395 SIVDILL--------QSISKKDNHKQVDV---DKYTRAN-AGGKKAQDCMLLAAEGDSAL 442
Query: 458 ALAMAGLSVVGR--------DRFGVFPLRGKLLNVREASSN--------------QVLNN 495
+L AGL+ +G+ D G+ L G ++N + +N Q+ NN
Sbjct: 443 SLVRAGLT-LGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNN 501
Query: 496 SEIGNIKKILGLKQGVEYNNVK---SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
+ I ++LGL Y + LRYG ++ D
Sbjct: 502 KVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVD----------------------- 538
Query: 553 CFMLAQDHDGS-HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV-LSFYSM 610
QD DG I GLL+ + H FWP L+ I F+ +TP+++ K V + FY
Sbjct: 539 -----QDLDGCGKILGLLLAYFHLFWPQLI-IHGFVKRLLTPLIRVYEKGKTVPVEFYYE 592
Query: 611 PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---DDQDGEA 667
+++AW + A+ ++KYYKGL + E K F+ H + V+ DD E
Sbjct: 593 QEFDAWAKKQTSLANH-TVKYYKGLAAHDTHEVKSMFK----HFDNMVYTFTLDDSAKEL 647
Query: 668 IELAFSKKKIEARKKWLLQ-----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
+ F + E RK+ L E ++ I S + + + + ++R I
Sbjct: 648 FHIYFGGES-ELRKRELCTGVVPLTETQTQSIHSDRQIPCSLHLQVDTKAYKLDAIERQI 706
Query: 723 PSMVDGLKPGQRKILF----CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
P+ +DG+ +RKIL C N +E KV QF GYV++H YHHG+ SL ++I+
Sbjct: 707 PNFLDGMTRARRKILAGGLKCFASNN--RERKVFQFGGYVADHMFYHHGDMSLNTSIIKA 764
Query: 779 AQDFVGSNNIN-LLQPNGQFGTRNQGGKDAASARYIFTRL-SPITRFLFPKDDDKLLDYL 836
AQ + GS+++ + G FG+R+ GGKDA S RYI +L S + +FP +D LL Y+
Sbjct: 765 AQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPYV 824
Query: 837 NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-----GEM 891
EDGQ+ EP +Y+P++P ++ GW DI+A VR ++ E+
Sbjct: 825 FEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKNNPKHEL 884
Query: 892 ME----------PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
+ P+ P F G +++ + +Y + E+ N T I ELP+R
Sbjct: 885 LHYAIERKITVLPLRPSNYNFKGHLKRFG--QYYYSYGTYVVSEQRNIIT--ITELPLRV 940
Query: 942 WTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR-------TKQEGL 992
T Y +ESI ++ +FI YS T++ V L S+ R T+++
Sbjct: 941 PTVAY---IESIKKSSNRMAFIEEIIDYSSSETIEILVKLKPNSLNRIVEEFKETEEQDS 997
Query: 993 LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
++ F S+++ KG I ++++ +IL + R + Y+KR + L+L +
Sbjct: 998 IENFLRLRNCLHSHLNFVKPKGGIIEFNSYYEILYAWLPYRRDVYQKRLMRERAVLKLRI 1057
Query: 1053 LKLENKVRFI-----LGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGAT 1107
+ VR+I L + + E + ++ + +L E GF P N I + +
Sbjct: 1058 IMETAIVRYINESADLNLSHYE---DEKEASRILSE---HGFPPL--NQSLITSPEFASI 1109
Query: 1108 DETEESEENPEVVNGVQSIDYDYLLSM-------AIGTLTLEKVQGLLADRDKLNEEVDD 1160
+E N + + G Y Y+LS+ A T +EK++ + A DK V+
Sbjct: 1110 EEL-----NQKALQGC----YTYILSLQARELLIAAKTRRVEKIKKMQARLDK----VEQ 1156
Query: 1161 LRKATP---ESLWVKDLDALD 1178
L + +P S+W++++DA++
Sbjct: 1157 LLQESPFPGASVWLEEIDAVE 1177
>sp|P0C9C1|TOP2_ASFWA DNA topoisomerase 2 OS=African swine fever virus (isolate
Warthog/Namibia/Wart80/1980) GN=War-122 PE=3 SV=1
Length = 1192
Score = 311 bits (796), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 319/1218 (26%), Positives = 535/1218 (43%), Gaps = 193/1218 (15%)
Query: 69 IHRTISYVPGLYKIFDEILVNAADNKQ----RDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
IHR + P L KIFDEI+VNA D+++ + K+ +K+ ++ + S N G G+P
Sbjct: 46 IHR--DHCPALLKIFDEIIVNATDHERACHSKTKKVTYIKISFNK--GVFSCENDGPGIP 101
Query: 125 VEIHQEEG------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
+ H++ VYVPE+ H L +N + GG NG G KL + S I+
Sbjct: 102 IAKHEQASLIAKRDVYVPEVASCHFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILT 161
Query: 179 TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHL-----EDD 233
TADG +KY Q + P I+ +E +T++ P + + D
Sbjct: 162 TADGA--QKYVQHINQRLDIIEPPTITPSRE--MFTRIELMPVYQELGYAEPLSETEQAD 217
Query: 234 VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP--------------KSVT 279
+ A + R A +GK + N S MY K+
Sbjct: 218 LSAWIYLRACQCAAYVGKGTTIYYNEKPCRTGSVMALAKMYTLLSAPNGTIHTATIKADA 277
Query: 280 RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK--KN 337
+ + + V+ +F+ VS +NG+ +K G HV ++ + V+ + K+
Sbjct: 278 KPYSLHPLQVAAVVSPKFKKFEHVSIINGVNCVK-GEHVTFLKKTINEIVVKKFQQTIKD 336
Query: 338 KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKS 397
KN + +++++ + I + Q K+ L++ ++ F + + FL +T
Sbjct: 337 KNRKTTLRDSCSNIFIVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTSMT--K 394
Query: 398 GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAK 457
IV+ LL + + K D K DV K A AGG+ ++ C L+ EGDSA
Sbjct: 395 SIVDILL--------QSISKKDNHKQVDV---DKYTRARNAGGKRAQDCMLLAAEGDSAL 443
Query: 458 ALAMAGLSVVGR--------DRFGVFPLRGKLLNVREASSN--------------QVLNN 495
+L GL+ +G+ D G+ L G ++N + +N Q+ NN
Sbjct: 444 SLLRTGLT-LGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNN 502
Query: 496 SEIGNIKKILGLKQGVEYNNVK---SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
+ I ++LGL Y + LRYG ++ D
Sbjct: 503 KVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVD----------------------- 539
Query: 553 CFMLAQDHDGS-HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV-LSFYSM 610
QD DG I GLL+ + H FWP L+ I F+ +TP+++ K V + FY
Sbjct: 540 -----QDLDGCGKILGLLLAYFHLFWPQLI-IHGFVKRLLTPLIRVYEKGKTVPVEFYYE 593
Query: 611 PDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---DDQDGEA 667
+++AW + A+ ++KYYKGL + E K F+ H + V+ DD E
Sbjct: 594 QEFDAWAKKQTSLANH-TVKYYKGLAAHDTHEVKSMFK----HFDNMVYTFTLDDSAKEL 648
Query: 668 IELAFSKKKIEARKKWLLQ-----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRSI 722
+ F + E RK+ L E + I S + + + + ++R I
Sbjct: 649 FHIYFGGES-ELRKRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQI 707
Query: 723 PSMVDGLKPGQRKILF----CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGM 778
P+ +DG+ +RKIL C N +E KV QF GYV++H YHHG+ SL ++I+
Sbjct: 708 PNFLDGMTRARRKILAGGVKCFASNN--RERKVFQFGGYVADHMFYHHGDMSLNTSIIKA 765
Query: 779 AQDFVGSNNIN-LLQPNGQFGTRNQGGKDAASARYIFTRL-SPITRFLFPKDDDKLLDYL 836
AQ + GS+++ + G FG+R+ GGKDA S RYI +L S + +FP +D LL Y+
Sbjct: 766 AQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPYV 825
Query: 837 NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-----GEM 891
EDGQ+ EP +Y+P++P ++ GW DI+A VR ++ E+
Sbjct: 826 FEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKNNPKHEL 885
Query: 892 ME----------PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
+ P+ P F G +++ + +Y I E+ N T I ELP+R
Sbjct: 886 LHYAIKHKITILPLRPSNYNFKGHLKRFG--QYYYSYGTYVISEQRNIIT--ITELPLRV 941
Query: 942 WTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR-------TKQEGL 992
T Y +ESI ++ +FI YS T++ V L S+ R T+++
Sbjct: 942 PTVAY---IESIKKSSNRMTFIEEIIDYSSSETIEILVKLKPNSLNRIMEEFKCTEEQDS 998
Query: 993 LKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELEL 1052
++ F S+++ KG I +++T +IL + R E Y+KR + L+L +
Sbjct: 999 IENFLRLRNCLHSHLNFVKPKGGIIEFNTYYEILYAWLPYRRELYQKRLMREHAVLKLRI 1058
Query: 1053 LKLENKVRFI--LGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDET 1110
+ VR+I +N + ++ + +L E GF P + +++
Sbjct: 1059 IMETAIVRYINESAELNLSHYEDEKEASRILSE---HGFPPLNQT-----LIISPEFASI 1110
Query: 1111 EESEENPEVVNGVQSIDYDYLLSM-------AIGTLTLEKVQGLLADRDKLNEEVDDLRK 1163
EE N + + G Y Y+LS+ A T +EK++ + A DK V+ L +
Sbjct: 1111 EEL--NQKALQGC----YTYILSLQARELLIAAKTRRVEKIKKMQARLDK----VEQLLQ 1160
Query: 1164 ATP---ESLWVKDLDALD 1178
+P S+W++++DA++
Sbjct: 1161 ESPFPGASVWLEEIDAVE 1178
>sp|Q00942|TOP2_ASFB7 DNA topoisomerase 2 OS=African swine fever virus (strain Badajoz 1971
Vero-adapted) GN=TOP PE=3 SV=1
Length = 1192
Score = 306 bits (784), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 319/1219 (26%), Positives = 535/1219 (43%), Gaps = 195/1219 (15%)
Query: 69 IHRTISYVPGLYKIFDEILVNAADNKQ----RDPKMDAVKVVIDQEHDLISVHNSGDGVP 124
IHR + P L KIFDE++VNA D+++ + K+ +K+ D+ + S N G G+P
Sbjct: 46 IHR--DHCPALLKIFDELIVNATDHERACHSKTKKVTYIKISFDK--GVFSCENDGPGIP 101
Query: 125 VEIHQEEG------VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIE 178
+ H++ VYVPE+ L +N + GG NG G KL + S I+
Sbjct: 102 IAKHEQASLIAKRDVYVPEVASCFFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILT 161
Query: 179 TADGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHL-----EDD 233
TADG +KY Q + P I+ +E +T++ P + + D
Sbjct: 162 TADGA--QKYVQQINQRLDIIEPPTITPSRE--MFTRIELMPVYQELGYAEPLSETEQAD 217
Query: 234 VVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYVDMYP--------------KSVT 279
+ A + R A +GK + N S MY K+
Sbjct: 218 LSAWIYLRACQCAAYVGKGTTIYYNDKPCRTGSVMALAKMYTLLSAPNSTIHTATIKADA 277
Query: 280 RFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNK--KN 337
+ + + V+ +F+ VS +NG+ +K G HV ++ + V+ + K+
Sbjct: 278 KPYSLHPLQVAAVVSPKFKKFEHVSIINGVNCVK-GEHVTFLKKTINEMVIKKFQQTIKD 336
Query: 338 KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEFLKKVTAKS 397
KN + ++++V + I + Q K+ L++ ++ F + + FL +T
Sbjct: 337 KNRKTTLRDSCSNIFVVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTSMT--R 394
Query: 398 GIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAK 457
IV+ LL + + K D K DV K A AGG+ ++ C L+ EGDSA
Sbjct: 395 SIVDILL--------QSISKKDNHKQVDV---DKYTRARNAGGKRAQDCMLLAAEGDSAL 443
Query: 458 ALAMAGLSVVGR--------DRFGVFPLRGKLLNVREASSN--------------QVLNN 495
+L GL+ +G+ D G+ L G ++N + +N Q+ NN
Sbjct: 444 SLLRTGLT-LGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNN 502
Query: 496 SEIGNIKKILGLKQGVEYNNVKS---LRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTF 552
+ I ++LGL Y + LRYG ++ D
Sbjct: 503 KVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVD----------------------- 539
Query: 553 CFMLAQDHDGS-HIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKVL--SFYS 609
QD DG I GLL+ + H FWP L+ I F+ +TP+++ K GK + FY
Sbjct: 540 -----QDLDGCGKILGLLLAYFHLFWPQLI-IHGFVKRLLTPLIRVYEK-GKTMPVEFYY 592
Query: 610 MPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVWE---DDQDGE 666
+++AW + + + ++KYYKGL + E K F+ H + V+ DD E
Sbjct: 593 EQEFDAWAKK-QTSLVNHTVKYYKGLAAHDTHEVKSMFK----HFDNMVYTFTLDDSAKE 647
Query: 667 AIELAFSKKKIEARKKWLLQ-----FEPGNHLDQKEKYIKYSDFVNKELILFSMADLQRS 721
+ F + E RK+ L E + I S + + + + ++R
Sbjct: 648 LFHIYFGGES-ELRKRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQ 706
Query: 722 IPSMVDGLKPGQRKILF----CSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILG 777
IP+ +DG+ +RKIL C N +E KV QF GYV++H YHHG+ SL ++I+
Sbjct: 707 IPNFLDGMTRARRKILAGGVKCFASNN--RERKVFQFGGYVADHMFYHHGDMSLNTSIIK 764
Query: 778 MAQDFVGSNNIN-LLQPNGQFGTRNQGGKDAASARYIFTRL-SPITRFLFPKDDDKLLDY 835
AQ + GS+++ + G FG+R+ GGKDA S RYI +L S + +FP +D LL Y
Sbjct: 765 AAQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPY 824
Query: 836 LNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLN-----GE 890
+ EDGQ+ EP +Y+P++P ++ GW DI+A VR ++ E
Sbjct: 825 VFEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYVDKDNPKHE 884
Query: 891 MME----------PMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIR 940
++ P+ P F G +++ + +Y I E+ N T I ELP+R
Sbjct: 885 LLHYAIKHKITILPLRPSNYNFKGHLKRFG--QYYYSYGTYDISEQRNIIT--ITELPLR 940
Query: 941 RWTQDYREFLESIIDQND--SFIRGFRQYSDDTTVDFEVFLSEESMMR-------TKQEG 991
T Y +ESI ++ +FI YS T++ V L S+ R T+++
Sbjct: 941 VPTVAY---IESIKKSSNRMTFIEEIIDYSSSETIEILVKLKPNSLNRIVEEFKETEEQD 997
Query: 992 LLKKFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELE 1051
++ F S+++ KG I ++++ +IL + R E Y+KR + L+L
Sbjct: 998 SIENFLRLRNCLHSHLNFVKPKGGIIEFNSYYEILYAWLPYRRELYQKRLMREHAVLKLR 1057
Query: 1052 LLKLENKVRFI--LGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDE 1109
++ VR+I +N + ++ + +L E GF P N I + + +E
Sbjct: 1058 IIMETAIVRYINESAELNLSHYEDEKEASRILSE---HGFPPL--NHTLIISPEFASIEE 1112
Query: 1110 TEESEENPEVVNGVQSIDYDYLLSM-------AIGTLTLEKVQGLLADRDKLNEEVDDLR 1162
N + + G Y Y+LS+ A T +EK++ + A DK V+ L
Sbjct: 1113 L-----NQKALQGC----YTYILSLQARELLIAAKTRRVEKIKKMQARLDK----VEQLL 1159
Query: 1163 KATP---ESLWVKDLDALD 1178
+ +P S+W++++DA++
Sbjct: 1160 QESPFPGASVWLEEIDAVE 1178
>sp|O67137|GYRB_AQUAE DNA gyrase subunit B OS=Aquifex aeolicus (strain VF5) GN=gyrB PE=3
SV=1
Length = 792
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 174/605 (28%), Positives = 257/605 (42%), Gaps = 131/605 (21%)
Query: 23 PNKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKI 82
P + E + S LEH+ LRP YIG I + GL+ +
Sbjct: 9 PQEYTAEAIKAVSGLEHVRLRPAMYIGDIGER-----------------------GLHHL 45
Query: 83 FDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGH 142
EIL NA D + + V I +++ ++V + G G+PV+IH E G E++F
Sbjct: 46 IWEILDNAVDEAVAGYARN-ISVTIHRDNS-VTVEDDGRGIPVDIHPETGKPAVEMVFTM 103
Query: 143 LLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSE 201
L ++ V +GG +G GA + N S I+E DGK Y+ F G+ E
Sbjct: 104 LGAGGKFEKKVYTYSGGLHGVGASVVNALSEWLIVEVYRDGK---IYRMAFKR--GEVVE 158
Query: 202 PNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
P + TKVSFKPD F T ++ D+V +KRV +LA L VK EL R
Sbjct: 159 PLHVVGETKKRGTKVSFKPDPEIFETTEIKFDIV---EKRVRELA-YLNPEVKFELTDER 214
Query: 262 VP--------------VKSFAEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQV---- 303
+ VK E + K + R E+ + V ++ FQ V
Sbjct: 215 LGKHLIYKFDRGIEELVKYLNEGKEPLFKDIIRIQ---GEKEGVIVDIA---FQYVKDYK 268
Query: 304 ----SFVNGIATIKGGTHVDYVANQVANHVMAVVN----KKNKNANVKAHNVKNHLWVFV 355
SFVN I T++GGTHV + ++ V+ + K + +V+ L V
Sbjct: 269 ERIESFVNNIKTVEGGTHVTGFRSGLSKAVIRMAQGLKLAKELKKSFTGEDVREGLTAVV 328
Query: 356 NALIDNPAFDSQTKETL----------TLRQSSFGSKCELSEEFLKKVTAKSGIVETLLS 405
+ NP F+ QTK L ++ S E + LK + K+ +E L+
Sbjct: 329 ACKVPNPQFEGQTKTKLGNQNVKQIVESITYDFLTSYFEKKRDVLKAIVEKA--IEAALA 386
Query: 406 WANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGG------RNSEQCTLILTEGDSAKAL 459
K++K+L VR S LE+ L G + +C + L EGDSA
Sbjct: 387 REAAKKAKEL----------VRRKSPLEEGVLPGKLADCSETDPSKCEIFLVEGDSA--- 433
Query: 460 AMAGLSVVGRDRF--GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVK 517
G + RDR + PLRGK++NV +A ++VL+N EI I LG G E ++K
Sbjct: 434 --GGSAKQARDRRYQAILPLRGKIINVEKARIDKVLSNDEIKAIVSALGCGIG-EDLDLK 490
Query: 518 SLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFW 577
LRY +++MTD D DGSHI+ LL+ F + F
Sbjct: 491 KLRYHKIILMTDA----------------------------DVDGSHIRTLLLTFFYRFM 522
Query: 578 PSLLK 582
P L++
Sbjct: 523 PKLVE 527
>sp|P77993|GYRB_THEMA DNA gyrase subunit B OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=gyrB PE=3 SV=2
Length = 636
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 169/634 (26%), Positives = 269/634 (42%), Gaps = 107/634 (16%)
Query: 37 LEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNKQR 96
LE + +RP YIGS K GL+ + E++ N+ D
Sbjct: 15 LEPVRMRPGMYIGSTGKR-----------------------GLHHLVYEVVDNSVDEALA 51
Query: 97 DPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDDNVKKT 156
D ++V + E + V ++G G+PV+IH EEG E++F L + + K
Sbjct: 52 G-YCDWIRVTL-HEDGSVEVEDNGRGIPVDIHPEEGRSALEVVFTVLHAGGKFSKDSYKI 109
Query: 157 TGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEPNISKCKEGDNWTK 215
+GG +G G + N S + DG K Y+Q + GK P + + T
Sbjct: 110 SGGLHGVGVSVVNALSEWLEVRVHRDG---KIYRQRYER--GKPVTPVEVIGETDKHGTI 164
Query: 216 VSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK---SFAEYVD 272
V FKPD F+ T + D++ + + L L + +NG + K EYV
Sbjct: 165 VRFKPDPLIFSETEFDPDILEHRLREIAFLVPGLKIEFEDRINGEKKTFKFDGGIVEYVK 224
Query: 273 MYPKSVTRFHERVN-ERWEICVT-------LSEGQFQQ--------VSFVNGIATIKGGT 316
+ H+ ++ +R E T + E FQ VSF N I T+ GGT
Sbjct: 225 YLNRGKKALHDVIHIKRTEKVKTKNGEDEVIVEIAFQYTDSYSEDIVSFANTIKTVDGGT 284
Query: 317 HVDYVANQVANHVMAVVNKKN---KNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
HV + + + K N K+ + + +V+ L ++ + NP F+ QTK L
Sbjct: 285 HVTAFKSTLTRLMNEYGKKHNFLKKDDSFQGEDVREGLTAVISVYVKNPEFEGQTKSKLG 344
Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLS-WANFKQSKDLKKNDGTKTEDVRGISKL 432
+ + EE K A +V+T+LS + KQ+++ K E VR + L
Sbjct: 345 NEEVKEAVTKAMREELKKIFDANPELVKTILSKIMSTKQAREAAKR---AREMVRRKNVL 401
Query: 433 EDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDR--FGVFPLRGKLLNV 484
++ L G + E+ L + EGDSA G + RDR V P+RGK+LNV
Sbjct: 402 QNTTLPGKLADCSSTHREKTELFIVEGDSA-----GGSAKQARDREFQAVLPIRGKILNV 456
Query: 485 REASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFIL 544
++S +++L N +I +I +G G +++ K LRYG ++IMTD
Sbjct: 457 EKSSLDRLLKNEQISDIIVAVGTGIGDDFDESK-LRYGRIIIMTD--------------- 500
Query: 545 IFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKNGKV 604
D DG+HI+ LL+ + + L++ + + P+ + K G+
Sbjct: 501 -------------ADIDGAHIRTLLLTLFYRYMRPLIEQGRVYIA-LPPLYRI--KAGRE 544
Query: 605 LSFYSMPDYE--AWKESLGGNASSWSIKYYKGLG 636
FY D E +KE L G I+ YKGLG
Sbjct: 545 -EFYVYSDQELAEYKEKLQGK--RIEIQRYKGLG 575
>sp|P09176|TOPL_BPT4 DNA topoisomerase large subunit OS=Enterobacteria phage T4 GN=39
PE=1 SV=2
Length = 516
Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 220/488 (45%), Gaps = 39/488 (7%)
Query: 35 SQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAADNK 94
S +EHI R YIGS T +++ + ++ YVPGL K+ DEI+ N+ D
Sbjct: 10 SDIEHIKKRSGMYIGSSANETHERFMFGK------WESVQYVPGLVKLIDEIIDNSVDEG 63
Query: 95 QRDPKMDAVKVVIDQEHDLISVHNSGDGVP-VEIHQEEGVYVPELIFGHLL--TSSNYDD 151
R A K+ + +++ ++V ++G G+P + G +P + + N+ D
Sbjct: 64 IRTKFKFANKINVTIKNNQVTVEDNGRGIPQAMVKTPTGEEIPGPVAAWTIPKAGGNFGD 123
Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
+ ++ TGG NG G+ LTNIFS F+ ET DG+ + +N M KS +I +G
Sbjct: 124 DKERVTGGMNGVGSSLTNIFSVMFVGETGDGQNNIVVR--CSNGMENKSWEDIPGKWKG- 180
Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVKSFAEYV 271
T+V+F PD F L + + R+ LA + ++ NG +V +F +Y
Sbjct: 181 --TRVTFIPDFMSFETNELSQVYLDITLDRLQTLA-VVYPDIQFTFNGKKVQ-GNFKKYA 236
Query: 272 DMYPKSVTRFHERVNER--WEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHV 329
Y + H V E+ I V S F+Q+++VN I T GG H+D + + +
Sbjct: 237 RQYDE-----HAIVQEQENCSIAVGRSPDGFRQLTYVNNIHTKNGGHHIDCAMDDICEDL 291
Query: 330 MAVVNKKNKNANVKAHNVKNHLWV--FVNALIDNPAFDSQTKETLTLRQSSFGSKCEL-- 385
+ + +K K +V VK L + FV + N QTKE LT S +L
Sbjct: 292 IPQIKRKFK-IDVTKARVKECLTIVMFVRDM-KNMRLIRQTKERLTSPFGEIRSHIQLDA 349
Query: 386 ---SEEFLKKVTAKSGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGGRN 442
S + L I+E L A ++ + K + K ANL G
Sbjct: 350 KKISRDILNNEAILMPIIEAAL--ARKLAAEKAAETKAAKKASKAKVHKHIKANLCG--K 405
Query: 443 SEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIK 502
TL LTEGDSA + V ++ G +PLRGK+LN S +L N E+ +I
Sbjct: 406 DADTTLFLTEGDSAIGYL---IDVRDKELHGGYPLRGKVLNSWGMSYADMLKNKELFDIC 462
Query: 503 KILGLKQG 510
I GL G
Sbjct: 463 AITGLVLG 470
>sp|P07065|TOP5_BPT4 DNA topoisomerase medium subunit OS=Enterobacteria phage T4 GN=52
PE=3 SV=2
Length = 442
Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 198/390 (50%), Gaps = 30/390 (7%)
Query: 706 VNKELILFSMADLQ-RSIPSMVDGLKPGQRKILFCSF---KRNFIKEAKVAQFSGYVSEH 761
++ E + ++M ++ R+IP+M+DG KP QR ++ + + N K K+A +G V++
Sbjct: 12 IDNEALAYAMYTVENRAIPNMIDGFKPVQRFVIARALDLARGNKDKFHKLASIAGGVAD- 70
Query: 762 SAYHHGEQSLASTILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPIT 821
YHHGE S MA + +NN LL G FG+R + AA++RYIF R+S
Sbjct: 71 LGYHHGENSAQDAGALMANTW--NNNFPLLDGQGNFGSRTV--QKAAASRYIFARVS--- 123
Query: 822 RFLFPKDDDKLLDYLNEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVA 881
+ + D +++D + I P +Y+PIIPTVL+NG GI TG+++YI ++ +
Sbjct: 124 KNFYNVYKDTEYAPVHQDKEHIPPAFYLPIIPTVLLNGVSGIATGYATYILPHSVSSVKK 183
Query: 882 NVRRLLNGEMMEPMHPWYRGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRR 941
V + L G+ + + F G + + + Y + G + + T + I E+P
Sbjct: 184 AVLQALQGKKVTKPKVEFPEFRGEVVEIDGQ-----YEIRGTYKFTSRTQMHITEIP--- 235
Query: 942 WTQDYREFLESIIDQNDSFIRGFRQYSD---DTTVDFEV-FLSEESMMRTKQE---GLLK 994
+ D ++ I+D ++ +GF + D + F+V F E S+ ++E ++K
Sbjct: 236 YKYDRETYVSKILDPLEN--KGFITWDDACGEHGFGFKVKFRKEYSLSDNEEERHAKIMK 293
Query: 995 KFKLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLK 1054
F L S N+ + + KG ++ YD ++++F +R + +KR +++ E
Sbjct: 294 DFGLIERRS-QNITVINEKGKLQVYDNVVDLIKDFVEVRKTYVQKRIDNKIKETESAFRL 352
Query: 1055 LENKVRFILGVVNGEIVVNNRKRTDLLLEL 1084
K FI V++GEIVV + R +L EL
Sbjct: 353 AFAKAHFIKKVISGEIVVQGKTRKELTEEL 382
>sp|P13364|GYRB_PSEPU DNA gyrase subunit B OS=Pseudomonas putida GN=gyrB PE=3 SV=2
Length = 806
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 134/534 (25%), Positives = 236/534 (44%), Gaps = 74/534 (13%)
Query: 78 GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
GL+ + E++ N+ D + D + V+I + ISV ++G G+PV++H+EEGV E
Sbjct: 37 GLHHMVFEVVDNSID-EALAGHCDDITVIIHTDES-ISVRDNGRGIPVDVHKEEGVSAAE 94
Query: 138 LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
+I L +DDN K +GG +G G + N S + ++ ++ ++Q + + G
Sbjct: 95 VIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEKLVLTVRRSGKI--WEQTYVH--G 150
Query: 198 KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL 257
P + T + FKP F H D++A + + L +G +K E
Sbjct: 151 VPQAPMAVVGESETTGTHIHFKPSAETFKNIHFSWDILAKRIRELSFLNSGVGILLKDER 210
Query: 258 NG------HRVPVKSFAEYVDM--YPKSVTRFHERVNERWEICVTLS---EGQFQQ--VS 304
+G + +++F EY++ P + FH V + V ++ F + +
Sbjct: 211 SGKEEFFKYEGGLRAFVEYLNTNKTPVNSQVFHFSVQREDGVGVEVALQWNDSFNENLLC 270
Query: 305 FVNGIATIKGGTHVDYVANQVANHVMAVVN-----KKNKNANVKAHNVKNHLWVFVNALI 359
F N I GGTH+ + + + + + KKNK A + + L ++ +
Sbjct: 271 FTNNIPQRDGGTHLVGFRSSLTRSLNSYIEQEGLAKKNKVATT-GDDAREGLTAIISVKV 329
Query: 360 DNPAFDSQTKETLTLRQSSFGSKCELSEEF----------LKKVTAKSGIVETLLSWANF 409
+P F SQTK+ L + + E+++ F K V K +++ +
Sbjct: 330 PDPKFSSQTKDKLVSSEVKTAVEQEMNKYFSDFLLENPNEAKAVVGK--MIDAARAREAA 387
Query: 410 KQSKDLKKNDGTKTEDVRGI-SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVG 468
++++++ + G D+ G+ KL D SE L L EGDSA A G +
Sbjct: 388 RKAREMTRRKGAL--DIAGLPGKLADCQEKDPALSE---LYLVEGDSAGGSAKQGRN--- 439
Query: 469 RDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMT 528
R + PL+GK+LNV +A ++++++ E+G + LG G E N+ LRY +++IMT
Sbjct: 440 RRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMT 499
Query: 529 DQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK 582
D D DGSHI+ LL+ F P L++
Sbjct: 500 D----------------------------ADVDGSHIRTLLLTFFFRQLPELVE 525
>sp|P43701|GYRB_HAEIN DNA gyrase subunit B OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=gyrB PE=3 SV=1
Length = 806
Score = 129 bits (324), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 231/534 (43%), Gaps = 75/534 (14%)
Query: 78 GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
GL+ + E++ NA D D + + D + +SV + G G+PV+IH EEGV E
Sbjct: 39 GLHHMVFEVVDNAIDEALAGHCSDIIVTIHDD--NSVSVQDDGGGIPVDIHPEEGVSAAE 96
Query: 138 LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
+I L +DDN K +GG +G G + N S + + +R + F ++G
Sbjct: 97 VIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSDKLQLTI---RRQGHVHEQFY-HLG 152
Query: 198 KKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVEL 257
+ P + T V F P F +T + ++A KR+ +L+ L V + L
Sbjct: 153 EPQSPLTVIGETEATGTTVRFWPSSDIFAITTFDYKILA---KRLRELS-FLNSGVSIRL 208
Query: 258 NGHR----------VPVKSFAEYVD-----MYPKSVTRFHERVNERWEICVTLSEGQFQQ 302
R +++F EY++ ++PK E+ E+ + ++G +
Sbjct: 209 IDKRDGSEDHFHYEGGIQAFVEYLNKNKNPIHPKPFYFTAEKDGIGVEVALQWNDGVNEN 268
Query: 303 V-SFVNGIATIKGGTHVDYVANQVANHVMAVVNK----KNKNANVKAHNVKNHLWVFVNA 357
V F N I GGTH+ + + + + K + + + L ++
Sbjct: 269 VYCFTNNIPQRDGGTHLAGFRGALTRSLNSYMENEGMLKKEKVATSGDDAREGLVAIISV 328
Query: 358 LIDNPAFDSQTKETLTLRQSSFGSKCELSE---EFLKKVTAKSGIVETLLSWANFKQSKD 414
+ +P F SQTK+ L + + ++E E+L + A + I+ + A +
Sbjct: 329 KVPDPKFSSQTKDKLVSSEVKSAVESAMNEKMQEYLLENPADAKIIVNQIIMAARAREAA 388
Query: 415 LKKNDGTKTE---DVRGI-SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRD 470
K + T+ + D+ G+ KL D ++ L L EGDSA G + VGRD
Sbjct: 389 RKAREMTRRKGALDIAGLPGKLADCQ---EKDPALSELYLVEGDSA-----GGSAKVGRD 440
Query: 471 R--FGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMT 528
R + PL+GK+LNV +A +++L++ E+G + LG G + N LRY H++IMT
Sbjct: 441 RKTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGRDEYNPDKLRYHHIIIMT 500
Query: 529 DQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK 582
D D DGSHI+ LL+ F + P L++
Sbjct: 501 D----------------------------ADVDGSHIRTLLLTFFYRQMPELIE 526
>sp|P94604|GYRB_CLOAB DNA gyrase subunit B OS=Clostridium acetobutylicum (strain ATCC 824
/ DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=gyrB
PE=3 SV=2
Length = 637
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 159/641 (24%), Positives = 268/641 (41%), Gaps = 106/641 (16%)
Query: 28 EEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEIL 87
E Q LE + RP YIGS + GL+ + EI+
Sbjct: 10 ESQIQVLEGLEAVRKRPGMYIGS-----------------------TGTRGLHHLVYEIV 46
Query: 88 VNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSS 147
N+ D + +KV I +++ ++V + G G+P+ IH + E+I L
Sbjct: 47 DNSID-EALAGYCSHIKVFIHKDNS-VTVSDDGRGMPIGIHHKMKKPTVEVIMTILHAGG 104
Query: 148 NYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKC 207
+ + +GG +G GA + N S +E + +KQ + + GK + P
Sbjct: 105 KFGGGAYRVSGGLHGVGASVVNALSETCEVEVKTEGHI--WKQTY--HRGKVASPFEKIG 160
Query: 208 KEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP---- 263
++ TK+ FKPD F T + D ++ +R+ +LA L K +K+EL R
Sbjct: 161 DSDEHGTKIYFKPDPEIFEDTEYDYDTLS---QRLRELA-FLNKGIKIELTDERHDKNEI 216
Query: 264 ------VKSFAEYVDMYPKSVTRFHERV--------NERWEICVTLSEGQFQQV-SFVNG 308
+KSF Y++ + V F E + N EI + ++G + + SF N
Sbjct: 217 FHYEGGLKSFVSYLNRNKEVV--FKEPIYVEGSIDSNYSVEIALQYNDGYNENIFSFANN 274
Query: 309 IATIKGGTHVDYVANQVANHVMAVVNK----KNKNANVKAHNVKNHLWVFVNALIDNPAF 364
I TI+GGTH+ + + K K + N+ +++ L V+ + P F
Sbjct: 275 IHTIEGGTHLAGFKTALTRVINDYAKKFGYLKENDKNLSGEDIREGLTAVVSVKLTEPQF 334
Query: 365 DSQTKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWANF-KQSKDLKKNDGTKT 423
+ QTK L + +SE + I + ++ A ++++ K
Sbjct: 335 EGQTKTKLGNTEVRGIVDSIISERVSTYLEENPQIGKLVIDKALVASRAREAAKK---AR 391
Query: 424 EDVRGISKLEDANLAG------GRNSEQCTLILTEGDSAKALAMAGLSVVGRDRF--GVF 475
E R S LE +L G +++E+C + + EGDSA G + GR+R +
Sbjct: 392 EITRRKSVLESTSLPGKLADCSSKDAEECEIYIVEGDSA-----GGSAKQGRNRRFQAIL 446
Query: 476 PLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAP 535
PLRGK++NV + +++LN+ EI + G G +++ V LRY ++IMTD
Sbjct: 447 PLRGKIMNVEKQRIDKILNSEEIKAMATAFGGGIGKDFD-VSKLRYHKIIIMTDA----- 500
Query: 536 LSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIV 595
D DG+HI+ L++ F + + L+ + P+
Sbjct: 501 -----------------------DVDGAHIRTLILTFFYRYMTELISEGHVFIA-QPPLY 536
Query: 596 KATNKNGKVLSFYSMPDYEAWKESLGGNASSWSIKYYKGLG 636
K T K K YS + E + +GG + I+ YKGLG
Sbjct: 537 KVT-KTRKEYYAYSDKELEDVLQDVGGKDKNTDIQRYKGLG 576
>sp|Q9I7C2|GYRB_PSEAE DNA gyrase subunit B OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=gyrB PE=3 SV=1
Length = 806
Score = 127 bits (319), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 136/534 (25%), Positives = 237/534 (44%), Gaps = 74/534 (13%)
Query: 78 GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
GL+ + E++ N+ D + + + I + I+V ++G G+PV+IH+EEGV E
Sbjct: 37 GLHHMVFEVVDNSID-EALAGYCSEISITIHTDES-ITVRDNGRGIPVDIHKEEGVSAAE 94
Query: 138 LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMG 197
+I L +DDN K +GG +G G + N S E + + K ++QV+ + G
Sbjct: 95 VIMTVLHAGGKFDDNTYKVSGGLHGVGVSVVNALSHELRLTIR--RHNKVWEQVY--HHG 150
Query: 198 KKSEPNISKCKEGD-NWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLG------ 250
P + + E D + T+V FKP F+ H D++A + + L +G
Sbjct: 151 VPQFP-LREVGETDGSGTEVHFKPSPETFSNIHFSWDILAKRIRELSFLNSGVGILLRDE 209
Query: 251 KSVKVELNGHRVPVKSFAEYVDMYPKSVTR-FH---ERVNERWEICVTLS-EGQFQQ--V 303
++ K EL + +K+F EY++ +V FH +R + + V L F + +
Sbjct: 210 RTGKEELFKYEGGLKAFVEYLNTNKTAVNEVFHFNVQREEDGVGVEVALQWNDSFNENLL 269
Query: 304 SFVNGIATIKGGTHV----DYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALI 359
F N I GGTH+ + + N++ A K + + L ++ +
Sbjct: 270 CFTNNIPQRDGGTHLAGFRSALTRNLNNYIEAEGLAKKFKIATTGDDAREGLTAIISVKV 329
Query: 360 DNPAFDSQTKETLTLRQSSFGSKCELSEEF----------LKKVTAKSGIVETLLSWANF 409
+P F SQTK+ L + + E+ + F K V K +++ +
Sbjct: 330 PDPKFSSQTKDKLVSSEVKTAVEQEMGKYFADFLLENPNEAKAVVGK--MIDAARAREAA 387
Query: 410 KQSKDLKKNDGTKTEDVRGI-SKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVG 468
++++++ + G D+ G+ KL D ++ L + EGDSA A G +
Sbjct: 388 RKAREMTRRKGAL--DIAGLPGKLADCQ---EKDPALSELYIVEGDSAGGSAKQGRN--- 439
Query: 469 RDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMT 528
R + PL+GK+LNV +A +++L++ E+G + LG G E N+ LRY +++IMT
Sbjct: 440 RRTQAILPLKGKILNVEKARFDKMLSSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMT 499
Query: 529 DQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLK 582
D D DGSHI+ LL+ F P L++
Sbjct: 500 D----------------------------ADVDGSHIRTLLLTFFFRQMPELIE 525
>sp|O84193|GYRB_CHLTR DNA gyrase subunit B OS=Chlamydia trachomatis (strain D/UW-3/Cx)
GN=gyrB PE=3 SV=1
Length = 804
Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 135/554 (24%), Positives = 235/554 (42%), Gaps = 99/554 (17%)
Query: 76 VPGLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEG--- 132
V GL+ + E++ N+ D + V ++ E IS+ ++G G+P++IH++E
Sbjct: 35 VTGLHHLVYEVVDNSIDEAMAGFCTEVVVRIL--EDGGISISDNGRGIPIQIHEKESAKQ 92
Query: 133 ---VYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIET-ADGKRLKKY 188
+ E++ L +D + K +GG +G G N S +FI + DG+ Y
Sbjct: 93 GREISALEVVLTVLHAGGKFDKDSYKVSGGLHGVGVSCVNALSEKFIAKVFKDGQ---AY 149
Query: 189 KQVFTNNMGKKSEPNISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGC 248
F+ + + + T+V F PD A F+ + A++ KR+ +LA
Sbjct: 150 SMEFSRGAPLTTLQVLGPTDK--RGTEVLFYPDPAIFSTCVFDR---AILMKRLRELA-F 203
Query: 249 LGKSVKVELNGHRVP------------VKSFAEYVD-----MYPKSVTRFHERVNE---- 287
L + V + R ++SF Y++ ++P + R +
Sbjct: 204 LNRGVTIVFEDDRDTGFDKVVFFYEGGIQSFVSYLNQNKEILFPNPIYMQGSRPGDDGDI 263
Query: 288 RWEICVTLSEGQFQQV-SFVNGIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVK--- 343
+E + + G + + S+ N I T +GGTH+ + + V + + N + + K
Sbjct: 264 EFEAALQWNSGYSELIYSYANNIPTRQGGTHLTGFSTALTRAVNSYIKAHNLSKSDKLSL 323
Query: 344 -AHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCE------LSEEFLKKVTAK 396
++K L V+ + NP F+ QTK+ L S GS + L+ F +
Sbjct: 324 TGEDIKEGLVAIVSVKVPNPQFEGQTKQKLG--NSDVGSVSQQISGEVLTTFFEENPQIA 381
Query: 397 SGIVETLLSWANFKQSKDLKKNDGTKTEDVRGISKLEDANLAGG------RNSEQCTLIL 450
IV+ + A +++ + + S L+ A L G ++ E+C + +
Sbjct: 382 KTIVDKVFVAAQAREAAKRARELTLRK------SALDSARLPGKLIDCLEKDPEKCEMYI 435
Query: 451 TEGDSAKALAMAGLSVVGRDRF--GVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLK 508
EGDSA G + GRDR + P+RGK+LNV +A +V N EIG+I LG
Sbjct: 436 VEGDSA-----GGSAKQGRDRRFQAILPIRGKILNVEKARLQKVFQNQEIGSIIAALGCG 490
Query: 509 QGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGL 568
G + N+ LRY ++IMTD D DGSHI+ L
Sbjct: 491 IGKDNFNLSKLRYKRIIIMTD----------------------------ADVDGSHIRTL 522
Query: 569 LINFIHSFWPSLLK 582
L+ F + +L++
Sbjct: 523 LLTFFYRHMSALIE 536
>sp|P0AES8|GYRB_SHIFL DNA gyrase subunit B OS=Shigella flexneri GN=gyrB PE=3 SV=2
Length = 804
Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 240/542 (44%), Gaps = 90/542 (16%)
Query: 78 GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEH--DLISVHNSGDGVPVEIHQEEGVYV 135
GL+ + E++ NA D + K +I H + +SV + G G+P IH EEGV
Sbjct: 35 GLHHMVFEVVDNAID----EALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSA 90
Query: 136 PELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFST--EFIIETADGKRLKKYKQVFT 193
E+I L +DDN K +GG +G G + N S E +I+ + K ++Q++
Sbjct: 91 AEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQ----REGKIHRQIYE 146
Query: 194 NNMGKKSEPNISKCKEGDNWTKVSFKPDLAKF-NMTHLEDDVVALMKKRVVDLAGCLGKS 252
+ G P + T V F P L F N+T E +++A KR+ +L+ L
Sbjct: 147 H--GVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILA---KRLRELS-FLNSG 200
Query: 253 VKVELNGHR----------VPVKSFAEYVD-----MYPKSVTRFHERVNERWEICVTLSE 297
V + L R +K+F EY++ ++P E+ E+ + ++
Sbjct: 201 VSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWND 260
Query: 298 GQFQQ--VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK--NKNANVKA--HNVKNHL 351
G FQ+ F N I GGTH+ + + A ++K+ +K A V A + + L
Sbjct: 261 G-FQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGL 319
Query: 352 WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE---EFL-------KKVTAKSGIVE 401
V+ + +P F SQTK+ L + + +++E E+L K V K I++
Sbjct: 320 IAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGK--IID 377
Query: 402 TLLSWANFKQSKDLKKNDGTKTEDVRGI-SKLEDANLAGGRNSEQCTLILTEGDSAKALA 460
+ ++++++ + G D+ G+ KL D R+ L L EGDSA A
Sbjct: 378 AARAREAARRAREMTRRKGAL--DLAGLPGKLADCQ---ERDPALSELYLVEGDSAGGSA 432
Query: 461 MAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLR 520
G + R + PL+GK+LNV +A +++L++ E+ + LG G + N LR
Sbjct: 433 KQGRN---RKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLR 489
Query: 521 YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
Y ++IMTD D DGSHI+ LL+ F + P +
Sbjct: 490 YHSIIIMTD----------------------------ADVDGSHIRTLLLTFFYRQMPEI 521
Query: 581 LK 582
++
Sbjct: 522 VE 523
>sp|P0AES6|GYRB_ECOLI DNA gyrase subunit B OS=Escherichia coli (strain K12) GN=gyrB PE=1
SV=2
Length = 804
Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 240/542 (44%), Gaps = 90/542 (16%)
Query: 78 GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEH--DLISVHNSGDGVPVEIHQEEGVYV 135
GL+ + E++ NA D + K +I H + +SV + G G+P IH EEGV
Sbjct: 35 GLHHMVFEVVDNAID----EALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSA 90
Query: 136 PELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFST--EFIIETADGKRLKKYKQVFT 193
E+I L +DDN K +GG +G G + N S E +I+ + K ++Q++
Sbjct: 91 AEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQ----REGKIHRQIYE 146
Query: 194 NNMGKKSEPNISKCKEGDNWTKVSFKPDLAKF-NMTHLEDDVVALMKKRVVDLAGCLGKS 252
+ G P + T V F P L F N+T E +++A KR+ +L+ L
Sbjct: 147 H--GVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILA---KRLRELS-FLNSG 200
Query: 253 VKVELNGHR----------VPVKSFAEYVD-----MYPKSVTRFHERVNERWEICVTLSE 297
V + L R +K+F EY++ ++P E+ E+ + ++
Sbjct: 201 VSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWND 260
Query: 298 GQFQQ--VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK--NKNANVKA--HNVKNHL 351
G FQ+ F N I GGTH+ + + A ++K+ +K A V A + + L
Sbjct: 261 G-FQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGL 319
Query: 352 WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE---EFL-------KKVTAKSGIVE 401
V+ + +P F SQTK+ L + + +++E E+L K V K I++
Sbjct: 320 IAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGK--IID 377
Query: 402 TLLSWANFKQSKDLKKNDGTKTEDVRGI-SKLEDANLAGGRNSEQCTLILTEGDSAKALA 460
+ ++++++ + G D+ G+ KL D R+ L L EGDSA A
Sbjct: 378 AARAREAARRAREMTRRKGAL--DLAGLPGKLADCQ---ERDPALSELYLVEGDSAGGSA 432
Query: 461 MAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLR 520
G + R + PL+GK+LNV +A +++L++ E+ + LG G + N LR
Sbjct: 433 KQGRN---RKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLR 489
Query: 521 YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
Y ++IMTD D DGSHI+ LL+ F + P +
Sbjct: 490 YHSIIIMTD----------------------------ADVDGSHIRTLLLTFFYRQMPEI 521
Query: 581 LK 582
++
Sbjct: 522 VE 523
>sp|P0AES7|GYRB_ECO57 DNA gyrase subunit B OS=Escherichia coli O157:H7 GN=gyrB PE=3 SV=2
Length = 804
Score = 124 bits (310), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 143/542 (26%), Positives = 240/542 (44%), Gaps = 90/542 (16%)
Query: 78 GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEH--DLISVHNSGDGVPVEIHQEEGVYV 135
GL+ + E++ NA D + K +I H + +SV + G G+P IH EEGV
Sbjct: 35 GLHHMVFEVVDNAID----EALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSA 90
Query: 136 PELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFST--EFIIETADGKRLKKYKQVFT 193
E+I L +DDN K +GG +G G + N S E +I+ + K ++Q++
Sbjct: 91 AEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQ----REGKIHRQIYE 146
Query: 194 NNMGKKSEPNISKCKEGDNWTKVSFKPDLAKF-NMTHLEDDVVALMKKRVVDLAGCLGKS 252
+ G P + T V F P L F N+T E +++A KR+ +L+ L
Sbjct: 147 H--GVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILA---KRLRELS-FLNSG 200
Query: 253 VKVELNGHR----------VPVKSFAEYVD-----MYPKSVTRFHERVNERWEICVTLSE 297
V + L R +K+F EY++ ++P E+ E+ + ++
Sbjct: 201 VSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWND 260
Query: 298 GQFQQ--VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK--NKNANVKA--HNVKNHL 351
G FQ+ F N I GGTH+ + + A ++K+ +K A V A + + L
Sbjct: 261 G-FQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGL 319
Query: 352 WVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSE---EFL-------KKVTAKSGIVE 401
V+ + +P F SQTK+ L + + +++E E+L K V K I++
Sbjct: 320 IAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGK--IID 377
Query: 402 TLLSWANFKQSKDLKKNDGTKTEDVRGI-SKLEDANLAGGRNSEQCTLILTEGDSAKALA 460
+ ++++++ + G D+ G+ KL D R+ L L EGDSA A
Sbjct: 378 AARAREAARRAREMTRRKGAL--DLAGLPGKLADCQ---ERDPALSELYLVEGDSAGGSA 432
Query: 461 MAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLR 520
G + R + PL+GK+LNV +A +++L++ E+ + LG G + N LR
Sbjct: 433 KQGRN---RKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLR 489
Query: 521 YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
Y ++IMTD D DGSHI+ LL+ F + P +
Sbjct: 490 YHSIIIMTD----------------------------ADVDGSHIRTLLLTFFYRQMPEI 521
Query: 581 LK 582
++
Sbjct: 522 VE 523
>sp|P0A2I3|GYRB_SALTY DNA gyrase subunit B OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=gyrB PE=3 SV=2
Length = 804
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 145/543 (26%), Positives = 238/543 (43%), Gaps = 92/543 (16%)
Query: 78 GLYKIFDEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPE 137
GL+ + E++ NA D D V + + +SV + G G+P IH EEGV E
Sbjct: 35 GLHHMVFEVVDNAIDEALAGHCKDIVVTI--HADNSVSVTDDGRGIPTGIHPEEGVSAAE 92
Query: 138 LIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFST--EFIIETADGKRLKKYKQVFTNN 195
+I L +DDN K +GG +G G + N S E +I+ DG K ++Q++ +
Sbjct: 93 VIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQR-DG---KIHRQIYEHG 148
Query: 196 MGKKSEPNISKCKEGD---NWTKVSFKPDLAKF-NMTHLEDDVVALMKKRVVDLAGCLGK 251
+ P GD T V F P F N+T E +++A KR+ +L+ L
Sbjct: 149 V-----PQAPLAVTGDTDKTGTMVRFWPSHETFTNVTEFEYEILA---KRLRELS-FLNS 199
Query: 252 SVKVELNGHR----------VPVKSFAEYVD-----MYPKSVTRFHERVNERWEICVTLS 296
V + L R +K+F EY++ ++P E+ E+ + +
Sbjct: 200 GVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWN 259
Query: 297 EGQFQQ--VSFVNGIATIKGGTHVDYVANQVANHVMAVVNKK--NKNANVKA--HNVKNH 350
+G FQ+ F N I GGTH+ + + A ++K+ +K A V A + +
Sbjct: 260 DG-FQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREG 318
Query: 351 LWVFVNALIDNPAFDSQTKETLT---LRQSSFGSKCELSEEFL-------KKVTAKSGIV 400
L V+ + +P F SQTK+ L ++ + EL E+L K V K I+
Sbjct: 319 LIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSEYLLENPSDAKIVVGK--II 376
Query: 401 ETLLSWANFKQSKDLKKNDGTKTEDVRGI-SKLEDANLAGGRNSEQCTLILTEGDSAKAL 459
+ + ++++++ + G D+ G+ KL D R+ L L EGDSA
Sbjct: 377 DAARAREAARRAREMTRRKGAL--DLAGLPGKLADCQ---ERDPALSELYLVEGDSAGGS 431
Query: 460 AMAGLSVVGRDRFGVFPLRGKLLNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSL 519
A G + R + PL+GK+LNV +A +++L++ E+ + LG G + N L
Sbjct: 432 AKQGRN---RKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKL 488
Query: 520 RYGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPS 579
RY ++IMTD D DGSHI+ LL+ F + P
Sbjct: 489 RYHSIIIMTD----------------------------ADVDGSHIRTLLLTFFYRQMPE 520
Query: 580 LLK 582
+++
Sbjct: 521 IVE 523
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 565,723,691
Number of Sequences: 539616
Number of extensions: 25484469
Number of successful extensions: 80119
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 1195
Number of HSP's that attempted gapping in prelim test: 74871
Number of HSP's gapped (non-prelim): 4285
length of query: 1484
length of database: 191,569,459
effective HSP length: 131
effective length of query: 1353
effective length of database: 120,879,763
effective search space: 163550319339
effective search space used: 163550319339
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)