RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 000459
(1484 letters)
>d1bjta_ e.11.1.1 (A:) DNA topoisomerase II, C-terminal fragment
(residues 410-1202) {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 760
Score = 575 bits (1482), Expect = 0.0
Identities = 368/795 (46%), Positives = 497/795 (62%), Gaps = 57/795 (7%)
Query: 422 KTEDVRGISKLEDANLAGGRNSEQCTLILTEGDSAKALAMAGLSVVGRDRFGVFPLRGKL 481
+ + KLEDAN AG + +CTL+LTEGDSA +LA+AGL+VVGRD +G +PLRGK+
Sbjct: 1 RKSRITNYPKLEDANKAGTKEGYKCTLVLTEGDSALSLAVAGLAVVGRDYYGCYPLRGKM 60
Query: 482 LNVREASSNQVLNNSEIGNIKKILGLKQGVEYNNVKSLRYGHLMIMTDQVLLAPLSFLLW 541
LNVREAS++Q+L N+EI IKKI+GL+ +Y + KSLRYGHLMIMTDQ
Sbjct: 61 LNVREASADQILKNAEIQAIKKIMGLQHRKKYEDTKSLRYGHLMIMTDQ----------- 109
Query: 542 FILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSLLKIPSFLVEFITPIVKATNKN 601
DHDGSHIKGL+INF+ S + LL I FL+EFITPI+K +
Sbjct: 110 -----------------DHDGSHIKGLIINFLESSFLGLLDIQGFLLEFITPIIKVSITK 152
Query: 602 GK--VLSFYSMPDYEAWKESLGGNASSWSIKYYKGLGTSTSKEGKEYFQNITLHKKDFVW 659
++FY+MPDYE W+E + +W KYYKGLGTS ++E +EYF N+ H K F
Sbjct: 153 PTKNTIAFYNMPDYEKWRE-EESHKFTWKQKYYKGLGTSLAQEVREYFSNLDRHLKIFHS 211
Query: 660 EDDQDGEAIELAFSKKKIEARKKWLLQFEPGNHLDQKEKYIKYSDFVNKELILFSMADLQ 719
D + I+LAFSKKK + RK+WL Q+EPG LD K I SDF+NKELILFS+AD
Sbjct: 212 LQGNDKDYIDLAFSKKKADDRKEWLRQYEPGTVLDPTLKEIPISDFINKELILFSLADNI 271
Query: 720 RSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVAQFSGYVSEHSAYHHGEQSLASTILGMA 779
RSIP+++DG KPGQRK+L+ FK+N E KVAQ + YVSE +AYHHGEQSLA TI+G+A
Sbjct: 272 RSIPNVLDGFKPGQRKVLYGCFKKNLKSELKVAQLAPYVSECTAYHHGEQSLAQTIIGLA 331
Query: 780 QDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLDYLNED 839
Q+FVGSNNI LL PNG FGTR GGKDAA+ARYI+T L+ +TR +F DD L Y+ ED
Sbjct: 332 QNFVGSNNIYLLLPNGAFGTRATGGKDAAAARYIYTELNKLTRKIFHPADDPLYKYIQED 391
Query: 840 GQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEPMHPWY 899
+ +EP WY+PI+P +LVNG+EGIGTGWS+YIP +NP +I+ N+R L+N E +E MHPW+
Sbjct: 392 EKTVEPEWYLPILPMILVNGAEGIGTGWSTYIPPFNPLEIIKNIRHLMNDEELEQMHPWF 451
Query: 900 RGFGGTIEKTASKEAGVTYTVTGIIEEVNETTLRIKELPIRRWTQDYREFLESIIDQNDS 959
RG+ GTIE+ Y + G IE++ + L I ELP R WT +E+L + ND
Sbjct: 452 RGWTGTIEEIEPL----RYRMYGRIEQIGDNVLEITELPARTWTSTIKEYLLLGLSGNDK 507
Query: 960 FIRGFRQYSDDTTV--DFEVFLSEESMMRTKQEGLLKKFKLTTTISTSNMHLFDSKGVIK 1017
+ + F + LS E M +T++ G ++FKL + IS NM FD G IK
Sbjct: 508 IKPWIKDMEEQHDDNIKFIITLSPEEMAKTRKIGFYERFKLISPISLMNMVAFDPHGKIK 567
Query: 1018 KYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLENKVRFILGVVNGEIVVNNRKR 1077
KY++ +IL EF+++RLE+Y+KRK E L+ E+ K +V+FI ++ E+ V N+ R
Sbjct: 568 KYNSVNEILSEFYYVRLEYYQKRKDHMSERLQWEVEKYSFQVKFIKMIIEKELTVTNKPR 627
Query: 1078 TDLLLELRQKGFTPFPKNSK---------------SIEAVVAGATDETEESEENPEVVNG 1122
++ EL GF F K K ++ + DE E+ V+NG
Sbjct: 628 NAIIQELENLGFPRFNKEGKPYYGSPNDEIAEQINDVKGATSDEEDEESSHEDTENVING 687
Query: 1123 VQ--SIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLDALDMQ 1180
+ Y+YLL M I +LT E+ Q LL + + E+++L K + + +W DL A ++
Sbjct: 688 PEELYGTYEYLLGMRIWSLTKERYQKLLKQKQEKETELENLLKLSAKDIWNTDLKAFEVG 747
Query: 1181 LDELDKSDARAEEER 1195
E + DA E R
Sbjct: 748 YQEFLQRDA---EAR 759
>d1ab4a_ e.11.1.1 (A:) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Length = 493
Score = 294 bits (755), Expect = 2e-88
Identities = 96/488 (19%), Positives = 179/488 (36%), Gaps = 38/488 (7%)
Query: 719 QRSIPSMVDGLKPGQRKILFCSFKRNFI---KEAKVAQFSGYVSEHSAYH-HGEQSLAST 774
R++P + DGLKP R++L+ K A+ G V YH HG+ ++ T
Sbjct: 2 GRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVI--GKYHPHGDSAVYDT 59
Query: 775 ILGMAQDFVGSNNINLLQPNGQFGTRNQGGKDAASARYIFTRLSPITRFLFPKDDDKLLD 834
I+ MAQ F S L+ G FG+ G AA+ RY RL+ I L + + +D
Sbjct: 60 IVRMAQPF--SLRYMLVDGQGNFGSI--DGDSAAAMRYTEIRLAKIAHELMADLEKETVD 115
Query: 835 YL-NEDGQQIEPTWYMPIIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNG---- 889
++ N DG + P IP +LVNGS GI G ++ IP +N +++ ++
Sbjct: 116 FVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDIS 175
Query: 890 --EMME----PMHPWY---RGFGGTIEKTASKEAGVTYTVTGIIEEV---NETTLRIKEL 937
+ME P P G G E + V +E T+ + E+
Sbjct: 176 IEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEI 235
Query: 938 PIRRWTQDYREFLESII-DQNDSFIRGFRQYSDDTTVDFEVFLSEESMMRTKQEGLLKKF 996
P + E + ++ ++ I R SD + + + +++ L +
Sbjct: 236 PYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQT 295
Query: 997 KLTTTISTSNMHLFDSKGVIKKYDTPEQILEEFFHIRLEFYEKRKKVQLENLELELLKLE 1056
+L + + + L + K + I+ F R E +R +L LE
Sbjct: 296 QLQVSFGINMVALHHGQ---PKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILE 352
Query: 1057 NKVRFILGVVNGEIVVNNRKRTDLLLELRQKGFTPFPKNSKSIEAVVAGATDETEESEEN 1116
+ + ++ + + +E A E
Sbjct: 353 ALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEF 412
Query: 1117 PEVVNGVQ--SIDYDYLLSMAIGTLTLEKVQGLLADRDKLNEEVDDLRK--ATPESLW-- 1170
+L + + LT + + LL + +L +++ +L + + + L
Sbjct: 413 GVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEV 472
Query: 1171 -VKDLDAL 1177
++L+ +
Sbjct: 473 IREELELV 480
>d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 239
Score = 207 bits (527), Expect = 4e-61
Identities = 134/240 (55%), Positives = 174/240 (72%), Gaps = 1/240 (0%)
Query: 26 TIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDE 85
+ + YQK SQLEHIL RPDTYIGS+E Q WIY+EE+ MI + ++ VPGL+KIFDE
Sbjct: 1 SASDKYQKISQLEHILKRPDTYIGSVETQEQLQWIYDEETDCMIEKNVTIVPGLFKIFDE 60
Query: 86 ILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLT 145
ILVNAADNK RDP M + V I E I V N G G+P+EIH +E +Y+PE+IFGHLLT
Sbjct: 61 ILVNAADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLT 120
Query: 146 SSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNIS 205
SSNYDD+ KK TGGRNGYGAKL NIFSTEFI+ETAD +KY Q + NNM P I+
Sbjct: 121 SSNYDDDEKKVTGGRNGYGAKLCNIFSTEFILETADLNVGQKYVQKWENNMSICHPPKIT 180
Query: 206 KCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVPVK 265
K+G ++TKV+FKPDL +F M L++D++ +M++RV D+ G + + + V LNG + ++
Sbjct: 181 SYKKGPSYTKVTFKPDLTRFGMKELDNDILGVMRRRVYDINGSV-RDINVYLNGKSLKIR 239
>d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId:
562]}
Length = 219
Score = 143 bits (362), Expect = 3e-39
Identities = 54/247 (21%), Positives = 95/247 (38%), Gaps = 31/247 (12%)
Query: 24 NKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIF 83
N + + L+ + RP YIG + T GL+ +
Sbjct: 2 NSSDSSSIKVLKGLDAVRKRPGMYIGDTDDGT----------------------GLHHMV 39
Query: 84 DEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
E++ NA D + + + + +SV + G G+P IH EEGV E+I L
Sbjct: 40 FEVVDNAIDEALAGHCKEIIVTIHAD--NSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVL 97
Query: 144 LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPN 203
+DDN K +GG +G G + N S + + K ++Q++ + + +
Sbjct: 98 HAGGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREG--KIHRQIYEHGVPQAPLAV 155
Query: 204 ISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHRVP 263
+ ++ T V F P L F + ++ KR+ +L+ L V + L R
Sbjct: 156 TGETEK--TGTMVRFWPSLETFTNVT--EFEYEILAKRLRELSF-LDSGVSIRLRDKRDG 210
Query: 264 VKSFAEY 270
+ Y
Sbjct: 211 KEDHFHY 217
>d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus
[TaxId: 274]}
Length = 212
Score = 140 bits (353), Expect = 3e-38
Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 33/231 (14%)
Query: 32 QKKSQLEHILLRPDTYIGSIEKHTQALWIYEEESKTMIHRTISYVPGLYKIFDEILVNAA 91
+ LE + RP YIG V G + +F EIL NA
Sbjct: 3 RVLKGLEGVRHRPAMYIGGTG-----------------------VEGYHHLFKEILDNAV 39
Query: 92 DNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHLLTSSNYDD 151
D + + + + ++V ++G G+PV++ EEG E+I+ L + ++
Sbjct: 40 DEALAGYATEILVRLNED--GSLTVEDNGRGIPVDLMPEEGKPAVEVIYNTLHSGGKFEQ 97
Query: 152 NVKKTTGGRNGYGAKLTNIFSTEFIIETADGKRLKKYKQVFTNNMGKKSEPNISKCKEGD 211
K +GG +G GA + N S ++E + + +
Sbjct: 98 GAYKVSGGLHGVGASVVNALSEWTVVEVFREGKHHRIAFSRGEVTEPLRVVGEAPRG--K 155
Query: 212 NWTKVSFKPDLAKFNMTHLEDDVVA-LMKKRVVDLAGCLGKSVKVELNGHR 261
T+V+FKPD F + + +++ +AG +K+ +
Sbjct: 156 TGTRVTFKPDPEIFGNLRFDPSKIRARLREVAYLVAG-----LKLVFQDRQ 201
>d1pvga1 d.14.1.3 (A:246-406) DNA topoisomerase II {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 161
Score = 129 bits (325), Expect = 5e-35
Identities = 62/161 (38%), Positives = 97/161 (60%), Gaps = 21/161 (13%)
Query: 267 FAEYVDMYPKSVTRF-------------------HERVNERWEICVTLSEGQFQQVSFVN 307
F YV++Y KS+ + +ER+N RWE+ +S+ FQQ+SFVN
Sbjct: 2 FKNYVELYLKSLEKKRQLDNGEDGAAKSDIPTILYERINNRWEVAFAVSDISFQQISFVN 61
Query: 308 GIATIKGGTHVDYVANQVANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQ 367
IAT GGTHV+Y+ +Q+ + ++ KK K +VK+ +KN++++F+N LI+NPAF SQ
Sbjct: 62 SIATTMGGTHVNYITDQIVKKISEILKKKKK-KSVKSFQIKNNMFIFINCLIENPAFTSQ 120
Query: 368 TKETLTLRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWAN 408
TKE LT R FGS+CE+ E++ K+ K+ + + A+
Sbjct: 121 TKEQLTTRVKDFGSRCEIPLEYINKI-MKTDLATRMFEIAD 160
>d1kija1 d.14.1.3 (A:221-392) DNA gyrase B {Thermus thermophilus
[TaxId: 274]}
Length = 172
Score = 49.7 bits (118), Expect = 3e-07
Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 10/154 (6%)
Query: 264 VKSFAEYVD-----MYPKSVTRFHERVNERWEICVTLSEGQFQQV-SFVNGIATIKGGTH 317
V SFA+ + +Y K E+ ++G ++ ++ N I T GGTH
Sbjct: 2 VASFAKALAEGEDLLYEKPFLIRGTHGEVEVEVGFLHTQGYNAEILTYANMIPTRDGGTH 61
Query: 318 VDYVANQVANHVMAVVNKKNKNA----NVKAHNVKNHLWVFVNALIDNPAFDSQTKETLT 373
+ + + + K N ++ L+ V+ + NP F+ QTK L
Sbjct: 62 LTAFKSAYSRALNQYAKKAGLNKEKGPQPTGDDLLEGLYAVVSVKLPNPQFEGQTKGKLL 121
Query: 374 LRQSSFGSKCELSEEFLKKVTAKSGIVETLLSWA 407
++ + E L+ + I + + A
Sbjct: 122 NPEAGTAVGQVVYERLLEILEENPRIAKAVYEKA 155
>d1s16a1 d.14.1.3 (A:1217-1383) Topoisomerase IV subunit B
{Escherichia coli [TaxId: 562]}
Length = 167
Score = 48.5 bits (115), Expect = 8e-07
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 283 ERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQVANHVMAVVNKKN---KN 339
+ W + G+ S+VN I T++GGTHV+ + + + + +N +
Sbjct: 29 DTEAVDWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEYRNILPRG 88
Query: 340 ANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEEF 389
+ A ++ + ++ + +P F QTKE L+ RQ + + + F
Sbjct: 89 VKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAF 138
>d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli
[TaxId: 562]}
Length = 168
Score = 42.5 bits (100), Expect = 7e-05
Identities = 37/179 (20%), Positives = 56/179 (31%), Gaps = 41/179 (22%)
Query: 84 DEILVNAADNKQRDPKMDAVKVVIDQEHDLISVHNSGDGVPVEIHQEEGVYVPELIFGHL 143
DE L A V V++ + + V + G G+PV+IH EEGV ELI
Sbjct: 19 DEALAGHAKR---------VDVILHADQ-SLEVIDDGRGMPVDIHPEEGVPAVELI---- 64
Query: 144 LTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETA-DGKRLKKYKQVFTNNMGKKSEP 202
+ N S + DG+ Y F N +
Sbjct: 65 -------------------LCISVVNALSKRVEVNVRRDGQ---VYNIAFENGEKVQDLQ 102
Query: 203 NISKCKEGDNWTKVSFKPDLAKFNMTHLEDDVVALMKKRVVDLAGCLGKSVKVELNGHR 261
+ C + + T V F PD F+ + + A L V++
Sbjct: 103 VVGTCGKRNTGTSVHFWPDETFFDSPRFSVSR---LTHVLKAKA-VLCPGVEITFKDEI 157
>d1y5ia1 b.52.2.2 (A:1075-1244) Respiratory nitrate reductase 1
alpha chain {Escherichia coli [TaxId: 562]}
Length = 170
Score = 30.3 bits (68), Expect = 0.93
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 851 IIPTVLVNGSEGIGTGWSSYIPNYNPRDIVANVRRLLNGEMMEP 894
PT ++ G + G++ Y + RD VR++ N + ++
Sbjct: 118 PKPTHMIGGYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDG 161
>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid
dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 30.6 bits (68), Expect = 1.2
Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
Query: 1391 TEMLKPAESSPEKKVRKMRASPFNKKSGSMLGRAGTIEEPSGSSPSTSEEVAEVLPPKAR 1450
T ++ SPE+ + + F + L + + + +P EEVAEV
Sbjct: 190 TAFMEKVLGSPEEVLDRTDIHTF-HRFYQYLAHSKQVFREAAQNP---EEVAEVF---LT 242
Query: 1451 PQRANRRQARYVL 1463
RA + RY
Sbjct: 243 ALRAPKPTLRYFT 255
>d1c17m_ f.18.1.1 (M:) F1F0 ATP synthase subunit A {Escherichia coli
[TaxId: 562]}
Length = 171
Score = 29.5 bits (66), Expect = 1.8
Identities = 8/79 (10%), Positives = 20/79 (25%)
Query: 521 YGHLMIMTDQVLLAPLSFLLWFILIFAWITTFCFMLAQDHDGSHIKGLLINFIHSFWPSL 580
Y ++ L S + L A + + F
Sbjct: 34 YIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKGIGGFTKELTLQPFNHWA 93
Query: 581 LKIPSFLVEFITPIVKATN 599
+ ++E ++ + K +
Sbjct: 94 FIPVNLILEGVSLLSKPVS 112
>d2et1a1 b.82.1.2 (A:1-201) Germin {Barley (Hordeum vulgare) [TaxId:
4513]}
Length = 201
Score = 29.5 bits (66), Expect = 2.1
Identities = 18/129 (13%), Positives = 32/129 (24%), Gaps = 25/129 (19%)
Query: 268 AEYVDMYPKSVTRFHERVNERWEICVTLSEGQFQQVSFVNGIATIKGGTHVDYVANQV-- 325
VD P H V E + ++ + A +
Sbjct: 74 MNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSGNKLY---SRVVRAGETFV 130
Query: 326 --ANHVMAVVNKKNKNANVKAHNVKNHLWVFVNALIDNPAFDSQTKETLTLRQSSFGSKC 383
+ N A ++ V +F+SQ + + + FGS
Sbjct: 131 IPRGLMHFQFNVGKTEA---------YMVV---------SFNSQNPGIVFVPLTLFGSDP 172
Query: 384 ELSEEFLKK 392
+ L K
Sbjct: 173 PIPTPVLTK 181
>d1g62a_ d.126.1.1 (A:) Ribosome anti-association factor eIF6 (aIF6)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 224
Score = 28.5 bits (64), Expect = 4.7
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 1136 IGTLTLEKVQGLLADRDKLNEEVDDLRKATPESLWVKDLD 1175
IG +T +GLL ++E+ LR + P+S+ ++ ++
Sbjct: 59 IGRMTAGNRRGLLVPTQTTDQELQHLRNSLPDSVKIQRVE 98
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.313 0.132 0.373
Gapped
Lambda K H
0.267 0.0530 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 5,423,958
Number of extensions: 265150
Number of successful extensions: 558
Number of sequences better than 10.0: 1
Number of HSP's gapped: 536
Number of HSP's successfully gapped: 20
Length of query: 1484
Length of database: 2,407,596
Length adjustment: 97
Effective length of query: 1387
Effective length of database: 1,075,786
Effective search space: 1492115182
Effective search space used: 1492115182
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.0 bits)