BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000462
(1482 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 107 bits (268), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 128/303 (42%), Gaps = 57/303 (18%)
Query: 123 LLLPPSSRNLDLDGIPVLDLFSIYACLRSFSTLLFLSPFELEDFVAALKCSSPNLLFDSV 182
L LP SS +L + VL SIY LR F ++ LSPF ED AAL C + L V
Sbjct: 175 LDLPDSSEDLFIANTHVLRALSIYEVLRRFRHMVRLSPFRFEDLCAALACEEQSALLTEV 234
Query: 183 HVSILR-ILRKHLEHLSKEGCESASDCLRSLNWGLLDLITWPIFMAEYFLIHNSGLKPGF 241
H+ +L+ ILR+ + G D + +++ L+D ITWP + Y + + F
Sbjct: 235 HIMLLKAILREEDAQGTHFGPLDQKDTV-NISLYLIDSITWPEVLRSYVESDKTFDRNVF 293
Query: 242 ELTRLKLFSSEYCKQPVSVKIEILRCLCDDMIEVEAIRMELNRRSSVAEPEMDFDRNINN 301
+ L +EY + ++E+L+ L D + +IR + + E + +D
Sbjct: 294 HI----LSHTEYPYTGIDNRLEVLQFLSDQFLTSNSIRDVM-----LQEGPIHYD----- 339
Query: 302 EIGKRRRVAMDISAGSCLTEEVVDDANDWNSDECCLCKMDGSLLCCDGCPAAYHSKCVG- 360
D C +C G LLCC+ CPA YH +CV
Sbjct: 340 -------------------------------DHCRVCHRLGDLLCCETCPAVYHLECVDP 368
Query: 361 -VANVPEGDWFCPEC-------ALDRHKPWMKPRKSLRGAELLGVDPHGRLYFCSCGYLL 412
+ +VP DW C C +D P K +R + LGVD HGR Y+ +
Sbjct: 369 PMNDVPTEDWQCGLCRSHKVSGVVDCVLPQEKQGVLIR-HDSLGVDRHGRKYWFIARRIF 427
Query: 413 VSD 415
+ D
Sbjct: 428 IED 430
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 1261 TLDQPKCYLCHEAEHTSTSNYIACEICGEWYHGDAFGLKVENISKLIGFRCHVCRK---- 1316
T + K Y + T Y+ C++C W+HGD + E KL F C C++
Sbjct: 2434 TRKKEKLYCICRTPYDDTKFYVGCDLCSNWFHGDCVSITEEASKKLSEFICIDCKRARET 2493
Query: 1317 RTPVCSC 1323
+ CSC
Sbjct: 2494 QQLYCSC 2500
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 97.1 bits (240), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 138/337 (40%), Gaps = 73/337 (21%)
Query: 121 PKLLLPPSSRNLDLDGIPVLDLFSIYACLRSFSTLLFLSPFELEDFVAALKCSSPNLLFD 180
P L P SS +L + ++++ +IY LR+F T+L LSPF EDF AAL L
Sbjct: 225 PPLEFPKSSEDLMVPNEHIMNVIAIYEVLRNFGTVLRLSPFRFEDFCAALVSQEQCTLMA 284
Query: 181 SVHVSILR-ILRKHLEHLSKEGCESASDCLRSLNWGLLDLITWPIFMAEYFLIHNSGLKP 239
+HV +L+ +LR+ + G D + S + +D +TWP E ++ K
Sbjct: 285 EMHVVLLKAVLREEDTSNTTFGPADLKDSVNSTLY-FIDGMTWP----EVLRVYCESDKE 339
Query: 240 GFELTRLKLFSSEYCKQPVSVKIEILRCLCDDMIEVEAIRMELNRRSSVAEPEMDFDRNI 299
+ + + +Y PV KI++L+ L D + R EL ++E + +D
Sbjct: 340 YHHVLPYQ-EAEDYPYGPVENKIKVLQFLVDQFLTTNIAREEL-----MSEGVIQYD--- 390
Query: 300 NNEIGKRRRVAMDISAGSCLTEEVVDDANDWNSDECCLCKMDGSLLCCDGCPAAYHSKCV 359
D C +C G LLCC+ C A YH +CV
Sbjct: 391 ---------------------------------DHCRVCHKLGDLLCCETCSAVYHLECV 417
Query: 360 --GVANVPEGDWFCPECA-------------LDRHKPWMKPRKSLRGAELLGVDPHGRLY 404
+ VPE +W C C + ++KP+++ E +G D R Y
Sbjct: 418 KPPLEEVPEDEWQCEVCVAHKVPGVTDCVAEIQKNKPYIR-------HEPIGYDRSRRKY 470
Query: 405 FCSCGYLLVSDSCDTE---LILNYYCRDDLNFVIDVL 438
+ L++ + + E I Y + L +ID L
Sbjct: 471 WFLNRRLIIEEDTENENEKKIWYYSTKVQLAELIDCL 507
>sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1
SV=2
Length = 1186
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%)
Query: 335 CCLCKMDGSLLCCDGCPAAYHSKCVGVANVPEGDWFCPEC 374
C +C +G +LCC+ CP YH+KC+ + + PEGDWFCPEC
Sbjct: 91 CWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPEC 130
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 312 DISAGSCLTEEV---VDDANDWNSDECCLCKMDGSLLCCDGCPAAYHSKCVG--VANVPE 366
D S G + EEV +++ +D + + C +CK G LLCCD CP++YH C+ + +P
Sbjct: 426 DNSEGEEILEEVGGDLEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPN 485
Query: 367 GDWFCPECA 375
G+W CP C
Sbjct: 486 GEWLCPRCT 494
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 50/113 (44%), Gaps = 18/113 (15%)
Query: 321 EEV--VDDANDWNSDECCLCKMDGSLLCCDGCPAAYHSKCV--GVANVPEGDWFCPECAL 376
EEV VD + D C +C+ G ++ CD CP AYH C+ + PEG W CP C
Sbjct: 357 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 416
Query: 377 DRHKPWMKPRKSLRGAELL--------GVDPHGRLYFCSC----GYLLVSDSC 417
+ + W + G E+L D H + FC G LL D+C
Sbjct: 417 EGIQ-WEAKEDNSEGEEILEEVGGDLEEEDDH-HMEFCRVCKDGGELLCCDTC 467
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 312 DISAGSCLTEEVVDDA---NDWNSDECCLCKMDGSLLCCDGCPAAYHSKCVG--VANVPE 366
D S G + EEV D +D + + C +CK G LLCCD CP++YH C+ + +P
Sbjct: 419 DNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPN 478
Query: 367 GDWFCPECA 375
G+W CP C
Sbjct: 479 GEWLCPRCT 487
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 16/112 (14%)
Query: 321 EEV--VDDANDWNSDECCLCKMDGSLLCCDGCPAAYHSKCV--GVANVPEGDWFCPECAL 376
EEV VD + D C +C+ G ++ CD CP AYH C+ + PEG W CP C
Sbjct: 350 EEVTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 409
Query: 377 DRHKPWMKPRKSLRGAELL---GVDPH----GRLYFCSC----GYLLVSDSC 417
+ + W + G E+L G DP + FC G LL D+C
Sbjct: 410 EGIQ-WEAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTC 460
>sp|Q04779|RCO1_YEAST Transcriptional regulatory protein RCO1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RCO1 PE=1 SV=1
Length = 684
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 57/138 (41%), Gaps = 29/138 (21%)
Query: 268 LCDDMIEVEAIRMELN------RRSSVAEPEMDFDR----NINNEIGKRRRVAMD----- 312
L ++M E IR + R+ EPE D D NI +I D
Sbjct: 171 LTENMTEESNIRSTIGWNGDIINRTRDREPESDRDNKKLSNIRTKIILSTNATYDSKSKL 230
Query: 313 -----ISAGSCLTEEVVDDAND-----WNSDECCLCKMDGSLLCCDGCPAAYHSKC---- 358
I + S +E++ D N+ N D C C GS LCCD CP ++H C
Sbjct: 231 FGQNSIKSTSNASEKIFRDKNNSTIDFENEDFCSACNQSGSFLCCDTCPKSFHFLCLDPP 290
Query: 359 VGVANVPEGDWFCPECAL 376
+ N+P+GDW C EC
Sbjct: 291 IDPNNLPKGDWHCNECKF 308
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog
OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
Query: 335 CCLCKMDGSLLCCDGCPAAYHSKCVG--VANVPEGDWFCPECA 375
C +CK G LLCCD CP+AYH+ C+ + +P+GDW CP C+
Sbjct: 440 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCS 482
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 325 DDANDWNSDECCLCKMDGSLLCCDGCPAAYHSKCV--GVANVPEGDWFCPEC 374
+D + D C +C+ G ++ CD CP AYH C+ + PEG W CP C
Sbjct: 370 EDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 421
>sp|Q6BER5|NU301_CAEEL Nucleosome-remodeling factor subunit NURF301-like OS=Caenorhabditis
elegans GN=nurf-1 PE=1 SV=2
Length = 2194
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 148/371 (39%), Gaps = 69/371 (18%)
Query: 121 PKLLLPPSSRNLDLDGIPVLDLFSIYACLRSFSTLLFLSPFELEDFVAALKCSSPNLLFD 180
PKL LP SS+++ + ++D IY LRS+ L ++PF EDF AAL + + +
Sbjct: 181 PKLELPESSQDIPIPTASIMDAVEIYEILRSYHRTLRITPFTFEDFCAALISHNNSCIMA 240
Query: 181 SVHVSILRILRKHLEHLSKEGCE-SASDCLRSLNWGLLDLITWPIFMAEYFLIHNSGLKP 239
VH + +LR L+ +E S ++ S+N +IH+
Sbjct: 241 EVH---MALLRNCLKSDDEEQTHYSVTETNNSVN----------------IMIHHMDTLT 281
Query: 240 GFELTRLKLFSSEYCKQPVSVKIEILRCLCDDMIEVEAIRMELNRRSSVAEPEMDFDRNI 299
E+ L+ + Y SV+ D I V+ P + +D +
Sbjct: 282 YAEI--LRQYIEAYPFADASVR---------DAINVDNY------------PFVGYDAKL 318
Query: 300 NNEIGKRRRVAMDISAGSCLTEEVVDDANDWNSDECC-LC-KMDGSLLCCDGCPAAYHSK 357
+ R S +++V++ + +DE C +C K G ++ C C AA+H +
Sbjct: 319 VVLLFMSYRFLY-----SSEFKKLVNNVGKFQNDENCRVCGKSSGRVVGCTQCEAAFHVE 373
Query: 358 CVGVANVPEGDWFCPECALDRHKPWMKP------RKSLRGAELLGVDPHGRLYFCSCGYL 411
C + PE C C + + P R+ LR ++ +G D +GR Y+ L
Sbjct: 374 CSHLKPFPEV-LVCNICKKNSAVRGVLPPDEAVDREPLR-SQPIGRDRYGRYYWFIVRRL 431
Query: 412 LVSDSCDTELILNYYCRDDLNFVIDVLKSSDTFYGG--------IINAICKQWDITVSSN 463
+V +TEL YY + K T+Y I+ +Q +TV
Sbjct: 432 VVQSLDETEL---YYYSTVPQLYQLLQKLDRTYYEKDLCDTIRLRIDEFLEQMALTVEMT 488
Query: 464 GVRSNLALNTV 474
R AL T+
Sbjct: 489 SERREAALETM 499
Score = 42.7 bits (99), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 12/70 (17%)
Query: 1281 YIACEICGEWYHGDAFGLKVENISKLIGFRCHVC------RKRTPVCSCMVSMGSDGSQL 1334
YI CE+C WYHGD G+ + I L + C C K P C+ D
Sbjct: 1914 YIQCELCARWYHGDCVGVAEQTILGLEHWSCEECIEEQERVKDQPALYCVCQKPYD---- 1969
Query: 1335 EAQTNYKIGC 1344
T + +GC
Sbjct: 1970 --DTKFYVGC 1977
Score = 35.8 bits (81), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 22/54 (40%)
Query: 1263 DQPKCYLCHEAEHTSTSNYIACEICGEWYHGDAFGLKVENISKLIGFRCHVCRK 1316
DQP Y + + T Y+ C+ C W+H + G + + C C +
Sbjct: 1956 DQPALYCVCQKPYDDTKFYVGCDSCQGWFHPECVGTTRAEAEQAADYNCPACTR 2009
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Mus musculus GN=Nsd1 PE=1 SV=1
Length = 2588
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 335 CCLCKMDGSLLCCDGCPAAYHSKCVGVANVPEGDWFCPEC 374
C +C GSLLCCD CPAA+H +C+ + ++PEG+W+C +C
Sbjct: 1608 CFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1646
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 333 DECCLCKMDGSLLCC--DGCPAAYHSKCVGVANVPEGDWFCP 372
DEC C G L+ C GCP YH+ C+ + P G W CP
Sbjct: 2017 DECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRPAGKWECP 2058
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 14/102 (13%)
Query: 281 ELNRRSSVAEPEMDFDRNINNEIG--KRRRVAMDISAGSCLTEEVVDDANDWNSDECCLC 338
EL + A P+ + + ++ G +++ ++ G+ L E V C C
Sbjct: 1399 ELLIHRTAASPKEILEEGVEHDPGMSASKKLQVERGGGAALKENV-----------CQNC 1447
Query: 339 KMDGSLLCCDG-CPAAYHSKCVGVANVPEGDWFCPECALDRH 379
+ G LL C+ C A+H +C+G+ +P G + C EC H
Sbjct: 1448 EKLGELLLCEAQCCGAFHLECLGLPEMPRGKFICNECHTGIH 1489
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Homo sapiens GN=NSD1 PE=1 SV=1
Length = 2696
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Query: 335 CCLCKMDGSLLCCDGCPAAYHSKCVGVANVPEGDWFCPEC 374
C +C GSLLCCD CPAA+H +C+ + ++PEG+W+C +C
Sbjct: 1710 CFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1748
Score = 43.1 bits (100), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 333 DECCLCKMDGSLLCC--DGCPAAYHSKCVGVANVPEGDWFCP 372
DEC C G L+ C GCP YH+ C+ + P G W CP
Sbjct: 2119 DECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRPAGKWECP 2160
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 14/113 (12%)
Query: 270 DDMIEVEAIRMELNRRSSVAEPEMDFDRNINNEIG--KRRRVAMDISAGSCLTEEVVDDA 327
D E+ EL + P+ + + ++ G +++ + G+ L E V
Sbjct: 1490 DSSKEIPGSEGELMPHRTATSPKETVEEGVEHDPGMPASKKMQGERGGGAALKENV---- 1545
Query: 328 NDWNSDECCLCKMDGSLLCCDG-CPAAYHSKCVGVANVPEGDWFCPECALDRH 379
C C+ G LL C+ C A+H +C+G+ +P G + C EC H
Sbjct: 1546 -------CQNCEKLGELLLCEAQCCGAFHLECLGLTEMPRGKFICNECRTGIH 1591
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 331 NSDECCLCKMDGSLLCCDGCPAAYHSKCV--GVANVPEGDWFCPEC 374
N+D C CK DG LL CD CP AYH+ C+ + PEGDW C C
Sbjct: 255 NNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHC 300
Score = 42.0 bits (97), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 312 DISAGSCLTE--EVVDDANDWNSDECC-LCKMDGSLLCCDGCPAAYHSKCVG--VANVP- 365
D S C+ EVV + +DE C +CK +LL CD C ++H+ C+ + VP
Sbjct: 294 DWSCAHCIEHGPEVVKEEPAKQNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPK 353
Query: 366 EGDWFCPEC 374
E W CP C
Sbjct: 354 EETWSCPRC 362
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 331 NSDECCLCKMDGSLLCCDGCPAAYHSKCVG--VANVPEGDWFCPEC 374
+ + C +C G LLCCD CP+ YH C+ + ++P+GDW CP C
Sbjct: 34 DEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 335 CCLCKMDGSLLCCDGCPAAYHSKCVG--VANVPEGDWFCPECA 375
C +CK G LLCCD CP++YH C+ + +P G+W CP C
Sbjct: 419 CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 461
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 324 VDDANDWNSDE---CCLCKMDGSLLCCDGCPAAYHSKCVG--VANVPEGDWFCPEC 374
+DD + + +D C +C+ G ++ CD CP AYH C+ + PEG W CP C
Sbjct: 332 IDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 387
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 331 NSDECCLCKMDGSLLCCDGCPAAYHSKCVG--VANVPEGDWFCPECAL 376
N D C +CK ++L CD CP++YH+ C+ + +PEG+W CP C +
Sbjct: 327 NMDYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCII 374
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 331 NSDECCLCKMDGSLLCCDGCPAAYHSKCV--GVANVPEGDWFCPECALDRHKP 381
+ + C +C DG L+ CD C AYH C+ + PEGDW CP C + H P
Sbjct: 264 HQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHC--EEHGP 314
>sp|Q09819|YAC5_SCHPO Uncharacterized protein C16C9.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC16C9.05 PE=1 SV=1
Length = 404
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 331 NSDECCLCKMDGSLLCCDGCPAAYHSKCVGVA----NVPEGDWFCPECALDRHKPWMKP 385
N D C C G +CC+GCP ++H C+ N+PEG WFC C++ H P P
Sbjct: 116 NVDYCSACGGRGLFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTCSIKSHHPPKHP 174
>sp|Q8BVE8|NSD2_MOUSE Histone-lysine N-methyltransferase NSD2 OS=Mus musculus GN=Whsc1
PE=1 SV=2
Length = 1365
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 331 NSDECCLCKMDGSLLCCDGCPAAYHSKCVGVANVPEGDWFCPEC 374
N C +C GSLLCC+ CPAA+H C+ + +P+G WFC +C
Sbjct: 830 NVSWCFVCSKGGSLLCCEACPAAFHPDCLNI-EMPDGSWFCNDC 872
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 335 CCLCKMDGSLLCCDG-CPAAYHSKCVGVANVPEGDWFCPECALDRH 379
C LC+ GSLL C+G C A+H C+G++ PEG + C ECA H
Sbjct: 670 CQLCEKTGSLLLCEGPCCGAFHLACLGLSRRPEGRFTCTECASGIH 715
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 333 DECCLCKMDGSLLCCDG--CPAAYHSKCVGVANVPEGDWFCP 372
DEC C G L+ CD C AYH C+G+ P G W CP
Sbjct: 1240 DECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECP 1281
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 335 CCLCKMDG---SLLCCDGCPAAYHSKCV--GVANVPEGDWFCPEC 374
C +C+ G +++ CDGC +H+ CV + VPEGDWFCPEC
Sbjct: 1151 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPEC 1195
>sp|O43918|AIRE_HUMAN Autoimmune regulator OS=Homo sapiens GN=AIRE PE=1 SV=1
Length = 545
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 331 NSDECCLCKMDGSLLCCDGCPAAYHSKCVG--VANVPEGDWFCPEC 374
N DEC +C+ G L+CCDGCP A+H C+ + +P G W C C
Sbjct: 295 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 340
>sp|O96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1
PE=1 SV=1
Length = 1365
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 331 NSDECCLCKMDGSLLCCDGCPAAYHSKCVGVANVPEGDWFCPEC 374
N C +C GSLLCC+ CPAA+H C+ + +P+G WFC +C
Sbjct: 830 NVSWCFVCSKGGSLLCCESCPAAFHPDCLNI-EMPDGSWFCNDC 872
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 335 CCLCKMDGSLLCCDG-CPAAYHSKCVGVANVPEGDWFCPECALDRH 379
C LC+ GSLL C+G C A+H C+G++ PEG + C ECA H
Sbjct: 670 CQLCEKPGSLLLCEGPCCGAFHLACLGLSRRPEGRFTCSECASGIH 715
Score = 40.0 bits (92), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 333 DECCLCKMDGSLLCCDG--CPAAYHSKCVGVANVPEGDWFCP 372
DEC C G L+ CD C AYH C+G+ P G W CP
Sbjct: 1240 DECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECP 1281
>sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens GN=PHF12 PE=1 SV=2
Length = 1004
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 331 NSDECCLCKMDGSLLCCDGCPAAYHSKC----VGVANVPEGDWFCPECALDRHK 380
N D C CK G LLCCD CPAA+H +C + +P G+W C C + R K
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKK 108
>sp|Q5SPL2|PHF12_MOUSE PHD finger protein 12 OS=Mus musculus GN=Phf12 PE=2 SV=1
Length = 1003
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 331 NSDECCLCKMDGSLLCCDGCPAAYHSKCVGVA----NVPEGDWFCPECALDRHK 380
N D C CK G LLCCD CPAA+H +C +P G+W C C + R K
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCTVRRKK 108
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 335 CCLCKMDGSLLCCDGCPAAYHSKCVG--VANVPEGDWFCPEC 374
C +CK G LLCCD C ++YH C+ + ++P G+W CP C
Sbjct: 459 CRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRC 500
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 321 EEVVDDANDWNSDECCLCKMDGSLLCCDGCPAAYHSKCVG--VANVPEGDWFCPEC 374
EE VD + D C +C+ G ++ CD CP AYH C+ + PEG W CP C
Sbjct: 368 EEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 423
>sp|Q9Z0E3|AIRE_MOUSE Autoimmune regulator OS=Mus musculus GN=Aire PE=1 SV=1
Length = 552
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 328 NDWNSDECCLCKMDGSLLCCDGCPAAYHSKCVG--VANVPEGDWFCPECALDR 378
N N DEC +C G L+CCDGCP A+H C+ + +P G W C C R
Sbjct: 294 NQKNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCLQGR 346
>sp|O88379|BAZ1A_MOUSE Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus
GN=Baz1a PE=1 SV=3
Length = 1555
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 335 CCLCKMDG---SLLCCDGCPAAYHSKCV--GVANVPEGDWFCPEC 374
C +C+ G +++ CDGC +H+ CV + VP+GDWFCPEC
Sbjct: 1152 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKAVPDGDWFCPEC 1196
>sp|Q6E2N3|TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio GN=trim33 PE=2
SV=1
Length = 1163
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 328 NDWNSDECCLCKMDGSLLCCDGCPAAYHSKC--VGVANVPEGDWFCPEC 374
+D N D C +C+ G LLCCD CP +H C + + P GDW C C
Sbjct: 917 DDPNEDWCAVCQNGGELLCCDHCPKVFHITCHIPTLKSSPSGDWMCTFC 965
>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24
PE=1 SV=3
Length = 1050
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 311 MDISAGSCLTEEVVDDANDWNSDECCLCKMDGSLLCCDGCPAAYHSKC--VGVANVPEGD 368
+D S S L +D N D C +C+ G LLCC+ CP +H C + N P G+
Sbjct: 805 LDPSQKSPLHVGETRKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGE 864
Query: 369 WFCPEC 374
W C C
Sbjct: 865 WICTFC 870
>sp|Q6ZPK0|PF21A_MOUSE PHD finger protein 21A OS=Mus musculus GN=Phf21a PE=1 SV=2
Length = 659
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 329 DWNSDECCLCKMDGSLLCCDGCPAAYHSKCV--GVANVPEGDWFCPEC 374
D + D C +C+ G LL CD C YH C+ + +P+G W CP C
Sbjct: 465 DIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRC 512
>sp|O95696|BRD1_HUMAN Bromodomain-containing protein 1 OS=Homo sapiens GN=BRD1 PE=1 SV=1
Length = 1058
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
Query: 335 CCLCKMDGS------LLCCDGCPAAYHSKCVGVANVPEGDWFCPECALDRHKP 381
CC+C MDG +L CD C A H +C GV +PEG W C C R +P
Sbjct: 217 CCIC-MDGECQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRARP 268
>sp|Q64127|TIF1A_MOUSE Transcription intermediary factor 1-alpha OS=Mus musculus GN=Trim24
PE=1 SV=1
Length = 1051
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 328 NDWNSDECCLCKMDGSLLCCDGCPAAYHSKC--VGVANVPEGDWFCPEC 374
+D N D C +C+ G LLCC+ CP +H C + N P G+W C C
Sbjct: 823 DDPNEDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTNFPSGEWICTFC 871
>sp|Q96BD5|PF21A_HUMAN PHD finger protein 21A OS=Homo sapiens GN=PHF21A PE=1 SV=1
Length = 680
Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 329 DWNSDECCLCKMDGSLLCCDGCPAAYHSKCV--GVANVPEGDWFCPEC 374
D + D C +C+ G LL CD C YH C+ + +P+G W CP C
Sbjct: 485 DIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 532
>sp|Q8UVR5|BAZ1A_XENLA Bromodomain adjacent to zinc finger domain protein 1A (Fragment)
OS=Xenopus laevis GN=baz1a PE=2 SV=1
Length = 627
Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 335 CCLCKMDG---SLLCCDGCPAAYHSKCV--GVANVPEGDWFCPEC 374
C +C+ G S++ CDGC +H CV + VPEGDWFCPEC
Sbjct: 225 CKVCRKKGDGESMVLCDGCDRGHHIYCVRPKLKYVPEGDWFCPEC 269
>sp|P34447|YM2A_CAEEL Uncharacterized protein F54F2.2, isoform a OS=Caenorhabditis
elegans GN=F54F2.2/F54F2.3/F54F2.4 PE=2 SV=2
Length = 867
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Query: 335 CCLCK-----MDGSLLCCDG--CPAAYHSKCVGVANVPEGDWFCPEC 374
CC+C D L+ CDG C A H C G+ VPEG+WFC +C
Sbjct: 8 CCVCADENGWTDNPLIYCDGENCEVAVHQGCYGIQEVPEGEWFCAKC 54
>sp|Q09698|YA27_SCHPO Uncharacterized protein C2F7.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.07c PE=4 SV=1
Length = 607
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 330 WNSDECCLCKMDGSLLCCDGCPAAYHSKCVGVA----NVPEGDWFCPEC 374
+N+D C C G+ LCC+ CP ++H C+ N+P+ W+C EC
Sbjct: 261 YNNDYCSACHGPGNFLCCETCPNSFHFTCIDPPIEEKNLPDDAWYCNEC 309
>sp|Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis
thaliana GN=MBD9 PE=2 SV=1
Length = 2176
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Query: 330 WNSDECCLC---KMDGSLLCCDGCPAAYHSKCVG--VANVPEGDWFCPECAL 376
W+ C +C K D S+L CD C A YH+ C+ + +P+G+W+CP C +
Sbjct: 1285 WDEGVCKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSCVI 1336
Score = 37.0 bits (84), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 344 LLCCDGCPAAYHSKCV--GVANVPEGDWFCPEC--ALDRHKPW 382
++ CD C +H CV GV P DW C +C +R K W
Sbjct: 98 VVVCDACERGFHMSCVNDGVEAAPSADWMCSDCRTGGERSKLW 140
>sp|Q9UPN9|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens GN=TRIM33 PE=1
SV=3
Length = 1127
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 328 NDWNSDECCLCKMDGSLLCCDGCPAAYHSKC--VGVANVPEGDWFCPEC 374
+D N D C +C+ G LLCC+ CP +H C + + P GDW C C
Sbjct: 883 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC 931
>sp|Q99PP7|TRI33_MOUSE E3 ubiquitin-protein ligase TRIM33 OS=Mus musculus GN=Trim33 PE=1
SV=2
Length = 1142
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 328 NDWNSDECCLCKMDGSLLCCDGCPAAYHSKC--VGVANVPEGDWFCPEC 374
+D N D C +C+ G LLCC+ CP +H C + + P GDW C C
Sbjct: 898 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC 946
>sp|Q96EK2|PF21B_HUMAN PHD finger protein 21B OS=Homo sapiens GN=PHF21B PE=2 SV=1
Length = 531
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 53/126 (42%), Gaps = 20/126 (15%)
Query: 270 DDMIEVEAIRMELNRRSSVAEP------EMDFDRNINNEIGKRRRVAMDISAGSCLTEEV 323
+ + E+++ R E RRS+ A P E + R +N + + + C E+
Sbjct: 291 EHLEEIQSKRQERKRRST-ANPAYSGLLETERKRLASNYLNNPLFLTARANEDPCWKNEI 349
Query: 324 VDDANDWNSDECCLCKMDGSLLCCDGCPAAYHSKCV--GVANVPEGDWFCPEC---AL-- 376
D + C CK +L C CP AYH C+ + P+G W CP C AL
Sbjct: 350 THD------EHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRCQQKALKK 403
Query: 377 DRHKPW 382
D PW
Sbjct: 404 DEGVPW 409
>sp|Q3T095|ING4_BOVIN Inhibitor of growth protein 4 OS=Bos taurus GN=ING4 PE=2 SV=1
Length = 248
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 313 ISAGSCLTEEVVDDANDWNSDECCLCKM--DGSLLCCDGCPAA---YHSKCVGVANVPEG 367
++ GS +V+D D N CLC G ++ CD + +H CVG+ P G
Sbjct: 175 VTFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIERFHFACVGLTTKPRG 234
Query: 368 DWFCPECALDRHK 380
WFCP C+ +R K
Sbjct: 235 KWFCPRCSQERKK 247
>sp|Q8C0D7|ING4_MOUSE Inhibitor of growth protein 4 OS=Mus musculus GN=Ing4 PE=1 SV=2
Length = 249
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 313 ISAGSCLTEEVVDDANDWNSDECCLCKM--DGSLLCCDGCPAA---YHSKCVGVANVPEG 367
++ GS +V+D D N CLC G ++ CD + +H CVG+ P G
Sbjct: 176 VTFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRG 235
Query: 368 DWFCPECALDRHK 380
WFCP C+ +R K
Sbjct: 236 KWFCPRCSQERKK 248
>sp|Q9UNL4|ING4_HUMAN Inhibitor of growth protein 4 OS=Homo sapiens GN=ING4 PE=1 SV=1
Length = 249
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 313 ISAGSCLTEEVVDDANDWNSDECCLCKM--DGSLLCCDGCPAA---YHSKCVGVANVPEG 367
++ GS +V+D D N CLC G ++ CD + +H CVG+ P G
Sbjct: 176 VTFGSVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRG 235
Query: 368 DWFCPECALDRHK 380
WFCP C+ +R K
Sbjct: 236 KWFCPRCSQERKK 248
>sp|O74759|NTO1_SCHPO Mst2 complex subunit nto1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=nto1 PE=1 SV=1
Length = 767
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 338 CKMDGSLLCCDGCPAAYHSKCVGVANVPEGDWFCPECALDRHK 380
C+ +++ CD C + H C G+ VPEG WFC +C L H+
Sbjct: 205 CENSNAIVFCDNCNTSVHQNCYGIPFVPEGQWFCKKCLLAPHE 247
>sp|Q56R14|TRI33_XENLA E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis GN=trim33 PE=1
SV=1
Length = 1091
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 22/126 (17%)
Query: 331 NSDECCLCKMDGSLLCCDGCPAAYHSKC--VGVANVPEGDWFCPECALDRHKPWMK---- 384
N D C +C+ G LLCC+ CP +H C + + P G+W C C D +KP ++
Sbjct: 849 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFCR-DLNKPEVEYDCD 907
Query: 385 -PRKSLRGAELLGVDPHGRLYFCSCGYLLVSDSCDTELILNYYCRD-DLNFVIDVLKSSD 442
+ S +G + G+ P ++ C+ L+L YC + + F V +
Sbjct: 908 NSQHSKKGKTVQGLSPVDQM------------KCE-RLLLYLYCHELSIEFQEPVPATIP 954
Query: 443 TFYGGI 448
+Y I
Sbjct: 955 NYYKII 960
>sp|Q5ZKY4|ING4_CHICK Inhibitor of growth protein 4 OS=Gallus gallus GN=ING4 PE=2 SV=1
Length = 249
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 313 ISAGSCLTEEVVDDANDWNSDECCLCKM--DGSLLCCDGCPAA---YHSKCVGVANVPEG 367
++ G+ +V+D D N CLC G ++ CD + +H CVG+ P G
Sbjct: 176 VTFGNVHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCSIEWFHFACVGLTTKPRG 235
Query: 368 DWFCPECALDRHK 380
WFCP C+ +R K
Sbjct: 236 KWFCPRCSQERKK 248
>sp|Q63625|PHRF1_RAT PHD and RING finger domain-containing protein 1 OS=Rattus
norvegicus GN=Phrf1 PE=1 SV=2
Length = 1685
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 335 CCLCKMDGSLLCCDGCPAAYHSKCV--GVANVPEGDWFCPECAL 376
C + LL CDGC A YH +C+ + VP +WFCPECA+
Sbjct: 194 CGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAV 237
>sp|Q924W6|TRI66_MOUSE Tripartite motif-containing protein 66 OS=Mus musculus GN=Trim66 PE=1
SV=3
Length = 1242
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 331 NSDECCLCKMDGSLLCCDGCPAAYHSKC--VGVANVPEGDWFCPEC 374
N D C +C G LLCCD CP YH C + + P G+W C C
Sbjct: 995 NEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLC 1040
>sp|Q498T3|ING3_RAT Inhibitor of growth protein 3 OS=Rattus norvegicus GN=Ing3 PE=2
SV=1
Length = 421
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 324 VDDANDWNSDECCLCKM--DGSLLCCDG--CPAA-YHSKCVGVANVPEGDWFCPECA 375
VD D N C+C G ++ CD CP +H CVG+ P+G WFCP+C
Sbjct: 354 VDWTYDPNEPRYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWFCPQCT 410
>sp|Q8VEK6|ING3_MOUSE Inhibitor of growth protein 3 OS=Mus musculus GN=Ing3 PE=2 SV=2
Length = 421
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 324 VDDANDWNSDECCLCKM--DGSLLCCDG--CPAA-YHSKCVGVANVPEGDWFCPEC 374
VD D N C+C G ++ CD CP +H CVG+ P+G WFCP+C
Sbjct: 354 VDWTYDPNEPRYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWFCPQC 409
>sp|Q9HDV4|LID2_SCHPO Lid2 complex component lid2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=lid2 PE=1 SV=1
Length = 1513
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 333 DECCLCKMDG---SLLCCDGCPAAYHSKCVG--VANVPEGDWFCPECALDRHKPWMKPRK 387
++C C +D ++L CDGC AAYH+ C+ + ++P+ DW+C C + PRK
Sbjct: 269 EQCEYCGLDKNPETILLCDGCEAAYHTSCLDPPLTSIPKEDWYCDACKFNISD--YDPRK 326
Query: 388 SLR 390
+
Sbjct: 327 GFK 329
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 1282 IACEICGEWYHGDAFGLKVENISKLIGFRCHVCRKRTPV 1320
I CEIC EWYH + + + + F C +C R +
Sbjct: 1110 IECEICHEWYHAKCLKMSKKKLRQDEKFTCPICDYRVEI 1148
>sp|Q66KD5|ING3_XENTR Inhibitor of growth protein 3 OS=Xenopus tropicalis GN=ing3 PE=2
SV=1
Length = 417
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 320 TEEVVDDANDWNSDECCLCKM--DGSLLCCDG--CPAA-YHSKCVGVANVPEGDWFCPEC 374
T VD D N C+C G ++ CD CP +H CVG++ P+G W+CP+C
Sbjct: 346 TNSQVDWTYDPNEPRYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLSEAPKGKWYCPQC 405
>sp|Q7ZX31|ING3_XENLA Inhibitor of growth protein 3 OS=Xenopus laevis GN=ing3 PE=2 SV=1
Length = 416
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 320 TEEVVDDANDWNSDECCLCKM--DGSLLCCDG--CPAA-YHSKCVGVANVPEGDWFCPEC 374
T VD D N C+C G ++ CD CP +H CVG++ P+G W+CP+C
Sbjct: 345 TNSQVDWTYDPNEPRYCICNQVSYGEMVGCDNQDCPIEWFHYGCVGLSEAPKGKWYCPQC 404
Query: 375 A 375
Sbjct: 405 T 405
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 534,644,697
Number of Sequences: 539616
Number of extensions: 22436055
Number of successful extensions: 63471
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 274
Number of HSP's that attempted gapping in prelim test: 62263
Number of HSP's gapped (non-prelim): 1325
length of query: 1482
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1352
effective length of database: 121,419,379
effective search space: 164159000408
effective search space used: 164159000408
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 68 (30.8 bits)